BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036290
         (796 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/762 (60%), Positives = 578/762 (75%), Gaps = 5/762 (0%)

Query: 4   LKRAFLFADKPSCHFHATRKRIHRL---CGNNQFCSDSFLRKDPIFLAKSLSLSENLKSR 60
           LK  F F+ K     +   K +H+L         CS  F+ KD + L+K+LS  EN KS 
Sbjct: 10  LKTFFQFSKKVYKFNNIQLKNLHQLYSPISTKSSCSGFFIGKDSVALSKALSFCENSKSF 69

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LGTQ+HG+I+KLGF++D+F+ NNLI  Y+K     +G  VFD M ERN+VSWTL+V  A
Sbjct: 70  ILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGA 129

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-VSMGASEFGYSIHCFALKIRIEKN 179
           IQ  E ++GL+++++M  +GF+PNEF +GSVMK C  S+    FG  +HCFALKI +E+N
Sbjct: 130 IQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERN 189

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           PFV CSVL+FYAKLGD+ AAERVF S+   DVGCWNAMIGGYA CGYGFEA+   S M  
Sbjct: 190 PFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRR 249

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +GI MDKYTFIN +QGCSL+ DF+ GRQIHGLIIRSE+E S  ++NAL+DMY K+ GM  
Sbjct: 250 KGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKS 309

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
              VF++M D+DV++WNT+FG FS++++P   ASLFH F+L+  RPNH+TFSIL R+CGK
Sbjct: 310 GLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGK 369

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           LL+LDLGLQ  CLALH G  DE N+TS+LI MF RCG +EMAH VF +   +NI  WNEL
Sbjct: 370 LLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNEL 429

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SGY  NCCDA+ LKTF ++ + GVE N  TF  V+ETC RSENQ M  QIHG   K+GF
Sbjct: 430 ISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGF 489

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +S GY+CSSLIK Y+  G LD+S +  N  +R DMA+WG M+SA VHQG + EA+   + 
Sbjct: 490 ASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNL 549

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L+EAGEKPDE+ILG+IL+SCA+  AY +TKS+H  +IKLGF   V+VASAV+DAYAKCGD
Sbjct: 550 LIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGD 609

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I+ A+MAF+QS  S+DV++YN +I+AYAHHG V EA++ +DKMKLANLQPSQATFVSV++
Sbjct: 610 IQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIA 669

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H G V+KGC LFKSMD  YGM+PSPD YGCLVDM SRNGYLEDAK +IE +P+   P
Sbjct: 670 ACGHIGHVEKGCRLFKSMD-LYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWP 728

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            + RSLLSGCR++GN+ELGEWA++KLL L+P NDAAH LL K
Sbjct: 729 AILRSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFK 770


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/674 (60%), Positives = 524/674 (77%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+KCG+   GL+VF EM  +NLVSWTL+VS A+QNGEF+MGL +Y++M   G +PNEFA
Sbjct: 1   MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           +G V K C ++G  E G  +HCFALK+ +EKNPFVG S+LN YAKLGD+  AERVF  + 
Sbjct: 61  LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
           +  VGCWNAMIGGYA C YGFE+L +VS M ++GI+MD +TFINAL+GC +V + + GRQ
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IHGLII+SEV  S +++N+L+DMY K+ G  YA KVF+R+ DKD+ISWNT+F G S+  +
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDD 240

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +    FHK +L+G +PN VTFSIL R CG+ LDL  GLQ  CLA   G  DE +VTSS
Sbjct: 241 AREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSS 300

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI MF RCGA+ MA  VFD+  +K+I T NE++SGY  NC +A+ L  FCN+   G+E +
Sbjct: 301 LINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEAD 360

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
            CTF   +E C R+ENQ++  Q+HG I+K+GF+S GY+CSSL+K YV FG LD+SFEF N
Sbjct: 361 ECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFN 420

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           G ERLD+ SWGAM+SALVH+G++ EA+ + + L EAG KPDE+I G+I N CA I AY++
Sbjct: 421 GVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQ 480

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
           TKS+H  V+K+G+   V+VASAVIDAYAKCGDI+ AR  FDQ+    DVI++NT++MAYA
Sbjct: 481 TKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYA 540

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           HHGLV EA+E F+KMKLA L+PSQATFVSV+SACSH GLV++G + FKSM+  YGM PSP
Sbjct: 541 HHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSP 600

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           D YGCLVD+ SRNG+LEDAKH+IE MPF P P ++RSLL+GCRIHGNKELGEWA++KLL 
Sbjct: 601 DNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQ 660

Query: 748 LLPKNDAAHVLLSK 761
           L+P+NDAA+VLLSK
Sbjct: 661 LVPENDAAYVLLSK 674



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 135/639 (21%), Positives = 272/639 (42%), Gaps = 12/639 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L  + LG  VH   +K+G   + F+ ++++ MY+K G      RVF+ M    +  W  +
Sbjct: 71  LGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAM 130

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +    Q       LK+   M+  G   + F   + +K C+ +G   FG  IH   ++  +
Sbjct: 131 IGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEV 190

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  S+++ Y K G    A +VF  +   D+  WN +  G +      E       
Sbjct: 191 GFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHK 250

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ++  G+  +  TF    + C    D   G Q H L  R  +    S+ ++LI+M+ +   
Sbjct: 251 LMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGA 310

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  A  VF+    K + + N +  G++ N +  +  +LF      G   +  TFS  L  
Sbjct: 311 MRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEA 370

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C +  +  LG Q+    +  GF  +  V SSL+  +   G ++ +   F+ V   ++ +W
Sbjct: 371 CFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSW 430

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++S        ++ +     + E+G + +   F  +   C      +    +H  ++K
Sbjct: 431 GAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVK 490

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAVT 535
            G+ +  ++ S++I +Y   G ++N+    +   R  D+  +  M+ A  H G   EAV 
Sbjct: 491 MGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVE 550

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT----KSIHPFVIKLGFNTEVYVASAVI 591
            F  +  A  +P +    +++++C+ +G  ++     KS++   +  G +        ++
Sbjct: 551 TFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMN---LDYGMDPSPDNYGCLV 607

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-S 650
           D +++ G ++ A+   +         ++ +L+     HG  ++ +  +   KL  L P +
Sbjct: 608 DLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHG--NKELGEWAAKKLLQLVPEN 665

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            A +V +    S +G       + K M  + G+   P C
Sbjct: 666 DAAYVLLSKVYSEEGSWSDAAKVRKGMIER-GLWKDPGC 703



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 9/301 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D    + +L      +++ LG Q+HG IVK GF +  ++ ++L+  Y   G      
Sbjct: 357 LEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSF 416

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+ +   +LVSW  ++SA +  G     + +   +K  G  P+EF  GS+   C  + 
Sbjct: 417 EFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIA 476

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMI 218
           A     S+H   +K+  E + FV  +V++ YAK GD+  A RVF   S   DV  +N M+
Sbjct: 477 AYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMV 536

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRS 275
             YAH G   EA+     M    +   + TF++ +  CS   LV   DI      + +  
Sbjct: 537 MAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDI--FFKSMNLDY 594

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGG--FSENKNPGQTA 332
            ++ S      L+D++ ++  ++ A  + E M      + W +L  G     NK  G+ A
Sbjct: 595 GMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWA 654

Query: 333 S 333
           +
Sbjct: 655 A 655


>gi|449451906|ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/722 (52%), Positives = 514/722 (71%), Gaps = 4/722 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L +DP  +A +LSLSEN KS +LG QVHGH+ KLGF  D F  NNL+ MY +CG+   G 
Sbjct: 8   LGRDPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRCGFMCEGF 67

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+EM +RN+VSW+LI+S+  +NGEF++ L+ +++M  +G MP EFA GSVMK C  + 
Sbjct: 68  KVFEEMPQRNVVSWSLIISSLSENGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVE 127

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A  FG  +HC + KI +E+N FVG S L+ YA+LGD+ +AE VF  +   DVGCWNAMIG
Sbjct: 128 AYGFGSGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIG 187

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY HCG G EALN VS +  EGI MD +T ++A++ CSL+ D D G+++HG I+R  +  
Sbjct: 188 GYTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGL-I 246

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           S + +NAL+DMY+ S   +   K+F  M  +D+ISWNT+FGG S  K   +   LF KF+
Sbjct: 247 STAAMNALMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGGSSNEK---EIVDLFGKFV 303

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           + G +PNH+TFS+L RQCG LLD  LG Q   LA+H GFLDE  V SS+I MF + G +E
Sbjct: 304 IEGMKPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLME 363

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           M HSVFD++ +K ++ WN+ +  Y  N  + +  +TF ++   GV  N  TF  ++ET C
Sbjct: 364 MVHSVFDSLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETAC 423

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           + EN  M  Q+H A +K GF S  Y+  SLIK Y+  G L++SFE  N  E +DMA++GA
Sbjct: 424 KFENPWMCRQLHCASMKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGA 483

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++S LVHQ + +EA+   + L+E+G+KPDE+  G+ILN C++  AY +TK+IH  V K+G
Sbjct: 484 VISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCSSRAAYHQTKAIHSLVEKMG 543

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F   V+VASA+IDAYAKCGDI  A+ AF+QS  SNDVIVYN+++MAYAHHGL  EA++ F
Sbjct: 544 FGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTF 603

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           +KM++A +QPSQA+FVSV+SAC H GLV++G  LF++M S Y M PS D YGCLVDMLSR
Sbjct: 604 EKMRIAKVQPSQASFVSVISACRHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSR 663

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           NG+L DA+++IE MPF P P + RSLLSGCRI+GN ELG+W +EKLL L P+N A HVLL
Sbjct: 664 NGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNVELGQWTAEKLLSLAPQNLATHVLL 723

Query: 760 SK 761
           SK
Sbjct: 724 SK 725


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/605 (54%), Positives = 432/605 (71%), Gaps = 6/605 (0%)

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K+    + F   +++  Y K G +A   +VF  +   ++  W  ++ G  
Sbjct: 94  LGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAV 153

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTF------INALQGCSLVADFDIGRQIHGLIIRSE 276
             G     L V   M+  G+  +++          AL GC +V + + GRQIHGLII+SE
Sbjct: 154 QNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSE 213

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           V  S +++N+L+DMY K+ G  YA KVF+R+ DKD+ISWNT+F G S+  +  +    FH
Sbjct: 214 VGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFH 273

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           K +L+G +PN VTFSIL R CG+ LDL  GLQ  CLA   G  DE +VTSSLI MF RCG
Sbjct: 274 KLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCG 333

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A+ MA  VFD+  +K+I T NE++SGY  NC +A+ L  FCN+   G+E + CTF   +E
Sbjct: 334 AMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALE 393

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C R+ENQ++  Q+HG I+K+GF+S GY+CSSL+K YV FG LD+SFEF NG ERLD+ S
Sbjct: 394 ACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVS 453

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           WGAM+SALVH+G++ EA+ + + L EAG KPDE+I G+I N CA I AY++TKS+H  V+
Sbjct: 454 WGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVV 513

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K+G+   V+VASAVIDAYAKCGDI+ AR  FDQ+    DVI++NT++MAYAHHGLV EA+
Sbjct: 514 KMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAV 573

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E F+KMKLA L+PSQATFVSV+SACSH GLV++G + FKSM+  YGM PSPD YGCLVD+
Sbjct: 574 ETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 633

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
            SRNG+LEDAKH+IE MPF P P ++RSLL+GCRIHGNKELGEWA++KLL L+P+NDAA+
Sbjct: 634 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAY 693

Query: 757 VLLSK 761
           VLLSK
Sbjct: 694 VLLSK 698



 Score =  262 bits (669), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 188/701 (26%), Positives = 317/701 (45%), Gaps = 46/701 (6%)

Query: 22  RKRIHRLCGNNQFCSDSF-LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIF 80
           R + H     +  CS S   R DP  L+ +L+ S N K  +LG+Q+H  I+KLGF NDIF
Sbjct: 53  RNQHHVYTSKSCNCSSSLSFRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIF 112

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
            QNNLI MY+KCG+   GL+VF EM  +NLVSWTL+VS A+QNGEF+MGL +Y++M   G
Sbjct: 113 SQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTG 172

Query: 141 FMPNEFAVGSVMKVCVSMGAS------EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            +PNEFA+G V K C ++G         FG  IH   ++  +  +  V  S+++ Y K G
Sbjct: 173 LVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNG 232

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
               A +VF  +   D+  WN +  G +      E       ++  G+  +  TF    +
Sbjct: 233 GGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFR 292

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
            C    D   G Q H L  R  +    S+ ++LI+M+ +   M  A  VF+    K + +
Sbjct: 293 FCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHT 352

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
            N +  G++ N +  +  +LF      G   +  TFS  L  C +  +  LG Q+    +
Sbjct: 353 CNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIV 412

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             GF  +  V SSL+  +   G ++ +   F+ V   ++ +W  ++S        ++ + 
Sbjct: 413 KSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIG 472

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
               + E+G + +   F  +   C      +    +H  ++K G+ +  ++ S++I +Y 
Sbjct: 473 LLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYA 532

Query: 495 NFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
             G ++N+    +   R  D+  +  M+ A  H G   EAV  F  +  A  +P +    
Sbjct: 533 KCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFV 592

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +++++C+ +G  ++                              GDI    M  D   + 
Sbjct: 593 SVISACSHLGLVEQ------------------------------GDIFFKSMNLDYGMDP 622

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           +    Y  L+  ++ +G + +A  I + M      P  A + S+++ C   G  + G   
Sbjct: 623 SP-DNYGCLVDLFSRNGFLEDAKHIIETMPFP---PWPAIWRSLLNGCRIHGNKELGEWA 678

Query: 674 FKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEIM 713
            K +     + P  D  Y  L  + S  G   DA  V + M
Sbjct: 679 AKKL---LQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGM 716


>gi|242082542|ref|XP_002441696.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
 gi|241942389|gb|EES15534.1| hypothetical protein SORBIDRAFT_08g000870 [Sorghum bicolor]
          Length = 810

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 294/702 (41%), Positives = 437/702 (62%), Gaps = 8/702 (1%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H   +KLG + D F  N+L+  Y+K G+ G  L VFDE   RNLV+WT +VSAA++ G  
Sbjct: 74  HASTIKLGVSADTFTANHLLIYYAKRGHLGSALDVFDETPRRNLVTWTAMVSAAVRGGAP 133

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS---EFGYSIHCFALKIR-IEKNPFV 182
           D+GL +   M  +GF PNEFA+ S +  C    A+   + G S+H  A+K   ++ NP+V
Sbjct: 134 DLGLALLSSMVRSGFCPNEFALASALGACCQSAAAADVKLGLSLHGLAVKAGGLDGNPYV 193

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           G S++  YAK G VAA ERVF  ISS   DV CWN M+ GY   G G++ +  V  M   
Sbjct: 194 GSSLMLLYAKHGRVAAVERVFAGISSSSRDVACWNTMLEGYVATGRGYDVMRTVVLMHHS 253

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D +T+I+A++  S+  D + GRQ+HGL+I SE E + S++N L+DMY K+   + A
Sbjct: 254 GIAADLFTYISAVKASSITCDLNFGRQVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEAA 313

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F ++  KD +SWNT+  G + +++    A  F      G +PN VTFS++LR  G  
Sbjct: 314 VVIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRYGCKPNQVTFSVMLRLSGAK 373

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
               LGLQ+  LA   G+ D   V +++I M  +CG +  A+  F N+S +N+ TWNE++
Sbjct: 374 ESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMI 433

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY  + C  D ++ F ++   G   +  T+  V+    +  + +   QIH  ++K GF+
Sbjct: 434 AGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFA 493

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           SC ++ +SLIK+ V  G + +  +    A ++D+ SWG  +SA V    + EA+ +F+  
Sbjct: 494 SCQFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLF 553

Query: 541 -VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            V+  EKPDE+ILGTILN+CA     ++ + IH  V++ G +    V+SA++DAYAKCGD
Sbjct: 554 RVDCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSKHFCVSSALVDAYAKCGD 613

Query: 600 IKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           I  A+  F + S  ++D I+YNT++ AYA+HGL+ E + ++  M    L P+ ATF++V+
Sbjct: 614 ITAAKSTFAEVSSVTDDAILYNTMLTAYANHGLIHEVLSLYQDMTQLQLAPTPATFIAVI 673

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GLV++G LLF SM S +GM P+   Y CL+D+L+R G LE+AK VIE MPFQP 
Sbjct: 674 SACSHLGLVEQGKLLFSSMLSAHGMNPTRANYTCLIDLLARRGLLEEAKGVIEAMPFQPW 733

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P V+RSL++GCRIHGNKELG  A+E++L + P +D A+V LS
Sbjct: 734 PAVWRSLMNGCRIHGNKELGLLAAEQILTMAPNSDGAYVSLS 775


>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
          Length = 787

 Score =  573 bits (1477), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 289/697 (41%), Positives = 439/697 (62%), Gaps = 8/697 (1%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG     F  N L+  Y++ G     L+VFDEM  RNLVSWT +VSA+ +NG   +G +
Sbjct: 56  KLGTLAHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 115

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-----FGYSIHCFALKIRIEKNPFVGCSV 186
            +V M  +GF PNEFA+ +++  C SM A          S+H  A++  ++ NPFVG S+
Sbjct: 116 FFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSL 175

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  YAK G +AAA+R F  I + D+ CWNAM+ GY   G+G  A++ V  M   G+  D+
Sbjct: 176 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 235

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           YT+I+A++ CS+ A +D+GRQ+H L+I S +E + S++N+L+DMY ++   + A  VF +
Sbjct: 236 YTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 295

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  KD +SWNT+F GF+ +++             +G +PN VTFS+LLR  G   +  LG
Sbjct: 296 IRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 355

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           LQ+  LA   G+ D   V +++I M  RCG ++ A+  F +++++NI TWNE+++GY   
Sbjct: 356 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 415

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               D ++ F ++   G   +  T+  V+     +   +   QIH  I+K GF+SC ++ 
Sbjct: 416 SRSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 475

Query: 487 SSLIKS-YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAG 544
           +SLIK+    FG + +S +    + ++++ SWGA++SA +  G N E + +F+    ++ 
Sbjct: 476 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 535

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPDE+IL T+LN+CA     +  + IH  V+K G +    VASAV+DAYAKCG+I  A 
Sbjct: 536 NKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAE 595

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            AF   S  +ND I+YNT++ AYA+HGL+ EA+ ++++M  A L P+ ATFV+++SACSH
Sbjct: 596 SAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSH 655

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G L F +M S YGM P    Y CLVD+L+R G L++AK VI+ MPFQP P V+R
Sbjct: 656 LGLVEQGKLAFSTMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWR 715

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           SL++GCRIHGNK+LG  A+E++L + P +D A+V LS
Sbjct: 716 SLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLS 752


>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 887

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 287/697 (41%), Positives = 438/697 (62%), Gaps = 8/697 (1%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG     F  N L   Y++ G     L+VFDEM  RNLVSWT +VSA+ +NG   +G +
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-----FGYSIHCFALKIRIEKNPFVGCSV 186
            +V M  +GF PNEF++ +++  C SM A          S+H  A++  ++ NPFVG S+
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 134

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  YAK G +AAA+R F  I + D+ CWNAM+ GY   G+G  A++ V  M   G+  D+
Sbjct: 135 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 194

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           YT+I+A++ CS+ A + +GRQ+H L+I S +E + S++N+L+DMY ++   + A  VF +
Sbjct: 195 YTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 254

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  KD +SWNT+F GF+ +++             +G +PN VTFS+LLR  G   +  LG
Sbjct: 255 IRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 314

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           LQ+  LA   G+ D   V +++I M  RCG ++ A+  F +++++NI TWNE+++GY   
Sbjct: 315 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 374

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               D ++ F ++   G   +  T+  V+     +   +   QIH  I+K GF+SC ++ 
Sbjct: 375 SHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 434

Query: 487 SSLIKS-YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAG 544
           +SLIK+    FG + +S +    + ++++ SWGA++SA +  G N E + +F+    ++ 
Sbjct: 435 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 494

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPDE+IL T+LN+CA     +  + IH  V+K G +    VASAV+DAYAKCG+I  A 
Sbjct: 495 NKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAE 554

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            AF   S  +ND I+YNT++ AYA+HGL+ EA+ ++++M  A L P+ ATFV+++SACSH
Sbjct: 555 SAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSH 614

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G L F +M S YGM P+   Y CLVD+L+R G L++AK VI+ MPFQP P V+R
Sbjct: 615 LGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWR 674

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           SL++GCRIHGNK+LG  A+E++L + P +D A+V LS
Sbjct: 675 SLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLS 711



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 146/661 (22%), Positives = 278/661 (42%), Gaps = 48/661 (7%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           ++   +HG  V+ G  ++ F+ ++L+ MY+K G      R F  +  ++L  W  ++   
Sbjct: 110 LIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGY 169

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + NG     +   + M  +G  P+ +   S +K C        G  +HC  +   +E N 
Sbjct: 170 VSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNT 229

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S+++ Y +      A  VF  I   D   WN M  G+AH          +  M   
Sbjct: 230 SVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRT 289

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   ++ TF   L+      +  +G QI  L  R     ++ + NA+I+M  +   +D A
Sbjct: 290 GFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRA 349

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +  F  +  +++++WN +  G+    +      LF   +  G RP+  T+S +L    + 
Sbjct: 350 YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEA 409

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNEL 419
                  Q+  + L  GF   + V++SLI       G+V+ +  + ++     + +W  +
Sbjct: 410 HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAI 469

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIK 476
           +S +  +  + +V+  F N++  G   N    F +        N  ++     IH  ++K
Sbjct: 470 ISAFLKHGLNDEVIFLF-NLFR-GDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 527

Query: 477 TGFSSCGYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           TG S+   + S+++ +Y   G++   +++F   + A   D   +  M++A  + G  HEA
Sbjct: 528 TGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATN-DAIMYNTMLTAYANHGLIHEA 586

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + ++  + +A   P       IL++C+ +G  ++         KL F+T       ++ A
Sbjct: 587 LNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQG--------KLAFST-------MLSA 631

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y     +  AR              Y  L+   A  GL+ EA  + D M     QP  A 
Sbjct: 632 YG----MHPARAN------------YACLVDLLARKGLLDEAKGVIDAMP---FQPWPAV 672

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEI 712
           + S+++ C   G    G L   + +    M PS D  Y  L ++ + +G  + A+     
Sbjct: 673 WRSLVNGCRIHGNKQLGVL---AAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRR 729

Query: 713 M 713
           M
Sbjct: 730 M 730


>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
 gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
          Length = 841

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 287/697 (41%), Positives = 438/697 (62%), Gaps = 8/697 (1%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG     F  N L   Y++ G     L+VFDEM  RNLVSWT +VSA+ +NG   +G +
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-----FGYSIHCFALKIRIEKNPFVGCSV 186
            +V M  +GF PNEF++ +++  C SM A          S+H  A++  ++ NPFVG S+
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 134

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  YAK G +AAA+R F  I + D+ CWNAM+ GY   G+G  A++ V  M   G+  D+
Sbjct: 135 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 194

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           YT+I+A++ CS+ A + +GRQ+H L+I S +E + S++N+L+DMY ++   + A  VF +
Sbjct: 195 YTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 254

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  KD +SWNT+F GF+ +++             +G +PN VTFS+LLR  G   +  LG
Sbjct: 255 IRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLG 314

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           LQ+  LA   G+ D   V +++I M  RCG ++ A+  F +++++NI TWNE+++GY   
Sbjct: 315 LQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLF 374

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               D ++ F ++   G   +  T+  V+     +   +   QIH  I+K GF+SC ++ 
Sbjct: 375 SHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVS 434

Query: 487 SSLIKS-YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAG 544
           +SLIK+    FG + +S +    + ++++ SWGA++SA +  G N E + +F+    ++ 
Sbjct: 435 TSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDST 494

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPDE+IL T+LN+CA     +  + IH  V+K G +    VASAV+DAYAKCG+I  A 
Sbjct: 495 NKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAE 554

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            AF   S  +ND I+YNT++ AYA+HGL+ EA+ ++++M  A L P+ ATFV+++SACSH
Sbjct: 555 SAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSACSH 614

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G L F +M S YGM P+   Y CLVD+L+R G L++AK VI+ MPFQP P V+R
Sbjct: 615 LGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWR 674

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           SL++GCRIHGNK+LG  A+E++L + P +D A+V LS
Sbjct: 675 SLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLS 711



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 146/661 (22%), Positives = 278/661 (42%), Gaps = 48/661 (7%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           ++   +HG  V+ G  ++ F+ ++L+ MY+K G      R F  +  ++L  W  ++   
Sbjct: 110 LIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGY 169

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + NG     +   + M  +G  P+ +   S +K C        G  +HC  +   +E N 
Sbjct: 170 VSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWGLGRQLHCLVIHSMLESNT 229

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S+++ Y +      A  VF  I   D   WN M  G+AH          +  M   
Sbjct: 230 SVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRT 289

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   ++ TF   L+      +  +G QI  L  R     ++ + NA+I+M  +   +D A
Sbjct: 290 GFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRA 349

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +  F  +  +++++WN +  G+    +      LF   +  G RP+  T+S +L    + 
Sbjct: 350 YGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEA 409

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNEL 419
                  Q+  + L  GF   + V++SLI       G+V+ +  + ++     + +W  +
Sbjct: 410 HGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAI 469

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIK 476
           +S +  +  + +V+  F N++  G   N    F +        N  ++     IH  ++K
Sbjct: 470 ISAFLKHGLNDEVIFLF-NLFR-GDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 527

Query: 477 TGFSSCGYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           TG S+   + S+++ +Y   G++   +++F   + A   D   +  M++A  + G  HEA
Sbjct: 528 TGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATN-DAIMYNTMLTAYANHGLIHEA 586

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + ++  + +A   P       IL++C+ +G  ++         KL F+T       ++ A
Sbjct: 587 LNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQG--------KLAFST-------MLSA 631

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y     +  AR              Y  L+   A  GL+ EA  + D M     QP  A 
Sbjct: 632 YG----MHPARAN------------YACLVDLLARKGLLDEAKGVIDAMP---FQPWPAV 672

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEI 712
           + S+++ C   G    G L   + +    M PS D  Y  L ++ + +G  + A+     
Sbjct: 673 WRSLVNGCRIHGNKQLGVL---AAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRR 729

Query: 713 M 713
           M
Sbjct: 730 M 730


>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
 gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
 gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
 gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
          Length = 748

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 286/697 (41%), Positives = 435/697 (62%), Gaps = 8/697 (1%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG     F  N+L+  Y++ G     L+VFDEM +RNLVSWT +VSA+  NG   +G +
Sbjct: 17  KLGTLAHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFR 76

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-----FGYSIHCFALKIRIEKNPFVGCSV 186
            +V M  +GF PNEF++ +++  C SM A          S+H  A++  ++ NPFVG S+
Sbjct: 77  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 136

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  YAK G +AAA+R F  I + D+ CWNAM+ GY   G+G  A+  V  M   G+  D+
Sbjct: 137 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDR 196

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           YT+I+A++ CS+ A +D+GRQ+H L+I S +E + S++N+L+DMY ++   + A  VF +
Sbjct: 197 YTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 256

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  KD +SWNT+  GF+ +++              G +PN VTFS+LLR  G   +  LG
Sbjct: 257 IRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLG 316

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           LQ+  LA   G+ D   V +++I M  RCG +  A+  F +++  NI TWNE+++GY   
Sbjct: 317 LQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLF 376

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + +K F ++   G   +  T+  V+     ++  +   QIH  I+K GF+SC ++ 
Sbjct: 377 SHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFVS 436

Query: 487 SSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAG 544
           +SLIK+ V  FG +  S +    A ++++ SWG ++SA +  G N E + +F+    ++ 
Sbjct: 437 TSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDST 496

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPDE+IL T+LN+CA     +  + IH  V+K G +    VASAV+DAYAKCG+I  A 
Sbjct: 497 NKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITSAE 556

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            AF   S  ++D I+YNT++ AYA+HGL+ EA+ ++++M  A L P+ ATFV+++SACSH
Sbjct: 557 SAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSACSH 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G L+F +M S YGM P+   Y CLVD+L+R G L++AK VI+ MPFQP P V+R
Sbjct: 617 LGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWR 676

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           SL+ GCRIHGNK+LG  A+E++L + P +D A++ LS
Sbjct: 677 SLVIGCRIHGNKQLGVLAAEQILRMAPSSDGAYISLS 713



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 147/662 (22%), Positives = 280/662 (42%), Gaps = 50/662 (7%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           ++   +HG  V+ G  ++ F+ ++L+ MY+K G      R F  +  ++L  W  ++   
Sbjct: 112 LIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGY 171

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + NG     ++  + M  +G  P+ +   S +K C      + G  +HC  +   +E N 
Sbjct: 172 VLNGFGHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNT 231

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S+++ Y +      A  VF  I   D   WN MI G+AH          +  M   
Sbjct: 232 SVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRI 291

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   ++ TF   L+      +  +G QI  L  R     ++ + NA+I+M  +   ++ A
Sbjct: 292 GCKPNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRA 351

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +  F  +   ++++WN +  G+    +  +T  LF   +  G RP+  T+S +L    + 
Sbjct: 352 YGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEA 411

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYM-FCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                  Q+    L  GF   + V++SLI       G+V+++  + ++     + +W  +
Sbjct: 412 QGARDHEQIHATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVV 471

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIK 476
           +S +  +  + +V+  F N++  G   N    F +        N  ++     IH  ++K
Sbjct: 472 ISAFLKHGLNDEVIFLF-NLFR-GDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLK 529

Query: 477 TGFSSCGYICSSLIKSYVNFGQL---DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHE 532
           TG S    + S+++ +Y   G++   +++F   S+G +  D   +  M++A  + G  HE
Sbjct: 530 TGHSKHFCVASAVVDAYAKCGEITSAESAFTVVSSGTD--DAILYNTMLTAYANHGLIHE 587

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ ++  + +A   P       IL++C+ +G  ++ K                V S ++ 
Sbjct: 588 ALNLYEEMTKAKLSPTPATFVAILSACSHLGLVEQGK---------------LVFSTMLS 632

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
           AY     +  AR              Y  L+   A  GL+ EA  + D M     QP  A
Sbjct: 633 AYG----MHPARAN------------YACLVDLLARKGLLDEAKGVIDAMP---FQPWPA 673

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIE 711
            + S++  C   G    G L   + +    M PS D  Y  L ++ + +G  + A+    
Sbjct: 674 VWRSLVIGCRIHGNKQLGVL---AAEQILRMAPSSDGAYISLSNVYADDGEWQSAEETRR 730

Query: 712 IM 713
            M
Sbjct: 731 RM 732


>gi|413915870|gb|AFW55802.1| hypothetical protein ZEAMMB73_686110 [Zea mays]
          Length = 810

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 293/707 (41%), Positives = 433/707 (61%), Gaps = 17/707 (2%)

Query: 63  GTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G+Q+H   +KLG    D +  N L+  YSK G     L VFDE   RN V+WT IVSAA 
Sbjct: 77  GSQLHASGIKLGVVFADTYTSNQLLIHYSKRGQLASALDVFDETPSRNHVTWTAIVSAAA 136

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKN 179
           + G   +GL+++  M  +GF PNEFA+ S +  C    A++   G S+H  A++  +  N
Sbjct: 137 RGGAPGLGLRLFASMLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGN 196

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           P+VG S++  YAK G VAAAERVF  I+S   DV CWNAM+ GY   G+G++A   V+ M
Sbjct: 197 PYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVALM 256

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSG 296
              GI  D +T+I+A +   +  D   GRQ+HGL++RS +E +  S++NAL+DMY K+  
Sbjct: 257 HGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFKAGQ 316

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            + A  +F ++  KD +SWNT+  G  + +     A  F      G R N VTFS++LR 
Sbjct: 317 KETAADIFGKIRWKDTVSWNTMISGLEDER---AAADCFVDMARCGCRSNQVTFSVMLRL 373

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            G      LGLQ+  LA   G+ D   V ++ I M  RCG +  A+  F ++  +N+ TW
Sbjct: 374 SGA----SLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTW 429

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           NE+++GY  + C  D ++ F ++   G   +  T+  V+    +  + +   Q+H +++K
Sbjct: 430 NEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLK 489

Query: 477 TGFSSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            GF+SC ++ +SLIK+    G  +    +    A  +D+ SWG  +SA V  G   EA++
Sbjct: 490 QGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALS 549

Query: 536 IFHS-LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           +F+S  V+  EKPDE+ILGTILN+CA     ++ + IH  V++ G +  + V+SA++DAY
Sbjct: 550 LFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSALVDAY 609

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ-PSQAT 653
           AKCGDI  A+ AF  + ++ D IVYNT++ AYA+HGL+ E + ++ +M    L  P+ AT
Sbjct: 610 AKCGDITAAKGAF-ATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPAT 668

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV+ +SACSH GLV++G LLF SM S +GM P+   Y CL+D+L+R G LE+A  VI+ M
Sbjct: 669 FVAAISACSHLGLVEQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAM 728

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PFQP P V+RSL++GCRIHGNKELG  ASE++L + P +D A+V LS
Sbjct: 729 PFQPWPAVWRSLMNGCRIHGNKELGLLASEQILRMAPNSDGAYVSLS 775


>gi|357155523|ref|XP_003577148.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 735

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 271/701 (38%), Positives = 424/701 (60%), Gaps = 8/701 (1%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           + +H  ++KLG + D F  N+L+  YS+ G     L VFDEM  RNLVSWT +VS + + 
Sbjct: 4   SHLHAQLLKLGMSGDTFTANHLLIAYSRTGLLKNALGVFDEMPHRNLVSWTAMVSGSARG 63

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKNPFV 182
           G   +GL ++V M  +GF+PNEFA+ S ++   S       G S+H  A+K+ +  +PF 
Sbjct: 64  GASQLGLGLFVSMVRSGFLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFA 123

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+L  YA  G VA AE  F  +   D+ CWNAM+ GY   G G EA+  V  M     
Sbjct: 124 GSSLLLMYANHGRVADAEGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMR---- 179

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +T+++A++ C +  + D GRQ+HG +I +  E   S++N L+DMY ++   D A  
Sbjct: 180 RCDMFTYVSAVKACLITGESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMA 239

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF R+  KD ISWNT+  GF+ +++  +    F     SG +PN VT S++LR C    +
Sbjct: 240 VFRRILRKDTISWNTVISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKEN 299

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             LGLQ+  LA   G+ +   V +++I M  RCG +  A   F N+ ++NI TWNE+++G
Sbjct: 300 ASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAG 359

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       D ++ F ++   G   +  T+  V+     +   +   Q+H +I+K G +S 
Sbjct: 360 YGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSR 419

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV- 541
            ++ +SLIK+   FG + ++ +      ++D+ SWG ++SA +  G N+E +++F     
Sbjct: 420 QFVSTSLIKAKAVFGSVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLFDLFRG 479

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           ++  + DE+IL T+LN+CA     ++ + +H  VI+ G +    VASA++DAYAKCG I 
Sbjct: 480 DSMNRADEFILATVLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDAYAKCGGIA 539

Query: 602 GARMAF-DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
            A+ AF D S  S D I+YNT++ AYA+HGL++EA+ +++ M  A L P+ ATFV+++SA
Sbjct: 540 SAKSAFADVSSGSGDAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSA 599

Query: 661 CSHKGLVDKGCLLFKSMDS-QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           CS+ GLV++G +LF  M S ++G+ P+   Y  LVD+L+R G+L +AK +IE+MP  P P
Sbjct: 600 CSNFGLVEQGKILFSLMLSEEHGIHPTRANYATLVDLLARKGFLHEAKDIIEVMPLHPWP 659

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +V+RSL++GCRIHGN ELG  A+E++L + P +D A+V LS
Sbjct: 660 SVWRSLMNGCRIHGNMELGVLAAEQILSMTPSSDGAYVSLS 700



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 154/685 (22%), Positives = 294/685 (42%), Gaps = 63/685 (9%)

Query: 46  FLAKSLSLSENLKSRV-------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           FL    +L+  L++         LG  +HG  VK+G   D F  ++L+ MY+  G     
Sbjct: 81  FLPNEFALASALRATASCHDGLRLGLSLHGVAVKVGVGGDPFAGSSLLLMYANHGRVADA 140

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
              F E+  R+L  W  ++   + NG     ++  V M+      + F   S +K C+  
Sbjct: 141 EGAFAEVRRRDLACWNAMLEGYVSNGCGHEAMRAVVLMRR----CDMFTYVSAVKACLIT 196

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFY--AKLGDVAAAERVFYSISSDDVGCWNA 216
           G S+FG  +H   +    E +  V   +++ Y  A L DVA A  VF  I   D   WN 
Sbjct: 197 GESDFGRQLHGCVIHNMFEPDTSVMNVLVDMYFRAGLKDVAMA--VFRRILRKDTISWNT 254

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I G+AH     E L   + M   G   ++ T    L+ C+   +  +G QI GL     
Sbjct: 255 VISGFAHDEDDREVLGCFADMSRSGCKPNEVTLSVMLRLCAAKENASLGLQIFGLAYCHG 314

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
              ++ + NA+I+M  +   ++ A   F  +  +++++WN +  G+           LF 
Sbjct: 315 YSENVLVANAVINMLSRCGLLNSADGFFCNLRFRNIVTWNEMIAGYGLYSYSEDAMRLFR 374

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
             +  G RP+  T+S +L    +  +     Q+    L  G    + V++SLI      G
Sbjct: 375 SMVCFGERPDEFTYSAVLSAFQEAHEPRNHEQVHASILKQGITSRQFVSTSLIKAKAVFG 434

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY--- 453
           +V+ A  + ++    ++ +W  ++S +  +  + +V+  F +++  G  +N    F    
Sbjct: 435 SVQSALKIMEDTGKMDLVSWGVVISAFLKHGLNNEVMSLF-DLFR-GDSMNRADEFILAT 492

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS----FEFSNGA 509
           V+  C  +   +   ++H  +I+TG S+   + S+L+ +Y   G + ++     + S+G+
Sbjct: 493 VLNACANAALLRQCRRVHSLVIRTGHSNHFCVASALVDAYAKCGGIASAKSAFADVSSGS 552

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D   +  M++A  + G  +EA++++  +  A   P       ++++C+  G  ++ K
Sbjct: 553 G--DAILYNTMLTAYANHGLINEALSLYEDMARAQLVPTPATFVALVSACSNFGLVEQGK 610

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +  F + L     ++   A                             Y TL+   A  
Sbjct: 611 IL--FSLMLSEEHGIHPTRA----------------------------NYATLVDLLARK 640

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD- 688
           G + EA +I + M    L P  + + S+M+ C   G ++ G L  + + S   M PS D 
Sbjct: 641 GFLHEAKDIIEVMP---LHPWPSVWRSLMNGCRIHGNMELGVLAAEQILS---MTPSSDG 694

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIM 713
            Y  L ++ + +G    A+   ++M
Sbjct: 695 AYVSLSNVFADDGEWHLAEEARKMM 719



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/400 (22%), Positives = 166/400 (41%), Gaps = 20/400 (5%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S S  + + + L+  L L    ++  LG Q+ G     G++ ++ + N +I M S+CG  
Sbjct: 276 SRSGCKPNEVTLSVMLRLCAAKENASLGLQIFGLAYCHGYSENVLVANAVINMLSRCGLL 335

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                 F  +  RN+V+W  +++        +  ++++  M   G  P+EF   +V+   
Sbjct: 336 NSADGFFCNLRFRNIVTWNEMIAGYGLYSYSEDAMRLFRSMVCFGERPDEFTYSAVLSAF 395

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                      +H   LK  I    FV  S++   A  G V +A ++       D+  W 
Sbjct: 396 QEAHEPRNHEQVHASILKQGITSRQFVSTSLIKAKAVFGSVQSALKIMEDTGKMDLVSWG 455

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITM---DKYTFINALQGCSLVADFDIGRQIHGLI 272
            +I  +   G   E +++    LF G +M   D++     L  C+  A     R++H L+
Sbjct: 456 VVISAFLKHGLNNEVMSLFD--LFRGDSMNRADEFILATVLNACANAALLRQCRRVHSLV 513

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQ 330
           IR+       + +AL+D Y K  G+  A   F  ++    D I +NT+   ++ +    +
Sbjct: 514 IRTGHSNHFCVASALVDAYAKCGGIASAKSAFADVSSGSGDAILYNTMLTAYANHGLINE 573

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT----- 385
             SL+     +   P   TF  L+  C      + GL  Q   L    L EE+       
Sbjct: 574 ALSLYEDMARAQLVPTPATFVALVSACS-----NFGLVEQGKILFSLMLSEEHGIHPTRA 628

Query: 386 --SSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSG 422
             ++L+ +  R G +  A  + + +  +   + W  L++G
Sbjct: 629 NYATLVDLLARKGFLHEAKDIIEVMPLHPWPSVWRSLMNG 668


>gi|293334125|ref|NP_001169301.1| uncharacterized protein LOC100383165 [Zea mays]
 gi|224028517|gb|ACN33334.1| unknown [Zea mays]
          Length = 660

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/633 (41%), Positives = 391/633 (61%), Gaps = 16/633 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           M  +GF PNEFA+ S +  C    A++   G S+H  A++  +  NP+VG S++  YAK 
Sbjct: 1   MLRSGFCPNEFALASALGACCQWVAADVKLGLSLHGLAVRAVLHGNPYVGSSLMLVYAKH 60

Query: 194 GDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           G VAAAERVF  I+S   DV CWNAM+ GY   G+G++A   V+ M   GI  D +T+I+
Sbjct: 61  GRVAAAERVFAGIASGSRDVACWNAMLEGYVANGHGYDATRTVALMHGSGIAPDMFTYIS 120

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           A +   +  D   GRQ+HGL++RS +E +  S++NAL+DMY K+   + A  +F ++  K
Sbjct: 121 AAKASWIARDLYFGRQVHGLVVRSVLESNNTSVMNALMDMYFKAGQKETAADIFGKIRWK 180

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D +SWNT+  G  + +     A  F      G R N VTFS++LR  G      LGLQ+ 
Sbjct: 181 DTVSWNTMISGLEDER---AAADCFVDMARCGCRSNQVTFSVMLRLSGA----SLGLQIF 233

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            LA   G+ D   V ++ I M  RCG +  A+  F ++  +N+ TWNE+++GY  + C  
Sbjct: 234 GLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRNVVTWNEMIAGYGLHGCSG 293

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           D ++ F ++   G   +  T+  V+    +  + +   Q+H +++K GF+SC ++ +SLI
Sbjct: 294 DAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHASVLKQGFASCQFVSTSLI 353

Query: 491 KSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPD 548
           K+    G  +    +    A  +D+ SWG  +SA V  G   EA+++F+S  V+  EKPD
Sbjct: 354 KAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQEALSLFNSCRVDCPEKPD 413

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           E+ILGTILN+CA     ++ + IH  V++ G +  + V+SA++DAYAKCGDI  A+ AF 
Sbjct: 414 EFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSALVDAYAKCGDITAAKGAF- 472

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ-PSQATFVSVMSACSHKGLV 667
            + ++ D IVYNT++ AYA+HGL+ E + ++ +M    L  P+ ATFV+ +SACSH GLV
Sbjct: 473 ATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPTPATFVAAISACSHLGLV 532

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           ++G LLF SM S +GM P+   Y CL+D+L+R G LE+A  VI+ MPFQP P V+RSL++
Sbjct: 533 EQGKLLFSSMLSAHGMNPTRANYACLIDLLARRGLLEEATGVIQAMPFQPWPAVWRSLMN 592

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           GCRIHGNKELG  ASE++L + P +D A+V LS
Sbjct: 593 GCRIHGNKELGLLASEQILRMAPNSDGAYVSLS 625



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 139/663 (20%), Positives = 261/663 (39%), Gaps = 80/663 (12%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA--ERNLVSWTLIVSA 119
           LG  +HG  V+     + ++ ++L+ +Y+K G      RVF  +A   R++  W  ++  
Sbjct: 30  LGLSLHGLAVRAVLHGNPYVGSSLMLVYAKHGRVAAAERVFAGIASGSRDVACWNAMLEG 89

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK- 178
            + NG      +    M  +G  P+ F   S  K         FG  +H   ++  +E  
Sbjct: 90  YVANGHGYDATRTVALMHGSGIAPDMFTYISAAKASWIARDLYFGRQVHGLVVRSVLESN 149

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N  V  ++++ Y K G    A  +F  I   D   WN MI G         A +    M 
Sbjct: 150 NTSVMNALMDMYFKAGQKETAADIFGKIRWKDTVSWNTMISGLED---ERAAADCFVDMA 206

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G   ++ TF   L+    ++   +G QI GL  R     ++ + NA I+M  +   + 
Sbjct: 207 RCGCRSNQVTFSVMLR----LSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLS 262

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A+  F  +  ++V++WN +  G+  +   G    LF   +  G+RP+  T+  +L    
Sbjct: 263 CAYGYFCDLGVRNVVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQ 322

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH-SVFDNVSYKNITTWN 417
           +  D     Q+    L  GF   + V++SLI      G+  +    +  +    ++ +W 
Sbjct: 323 QDHDARNHEQVHASVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWG 382

Query: 418 ELLSGYC-----------FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQ 465
             +S +            FN C  D  +   + +  G  +N C    ++  C C      
Sbjct: 383 VAISAFVKHGLGQEALSLFNSCRVDCPEK-PDEFILGTILNACANAALIRQCRC------ 435

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               IH  +++TG S    + S+L+ +Y   G +  +          D   +  M++A  
Sbjct: 436 ----IHSLVVRTGHSKHLCVSSALVDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYA 491

Query: 526 HQGHNHEAVTIFHSLVE---AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           + G   E ++++  + +   A   P  ++    +++C+ +G  ++ K +           
Sbjct: 492 NHGLIREVLSLYQEMTQLQLAAPTPATFV--AAISACSHLGLVEQGKLLF---------- 539

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                S+++ A+                  +N    Y  LI   A  GL+ EA  +   M
Sbjct: 540 -----SSMLSAHGM------------NPTRAN----YACLIDLLARRGLLEEATGVIQAM 578

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
                QP  A + S+M+ C   G  + G L      S+  ++ +P+  G  V +   + Y
Sbjct: 579 P---FQPWPAVWRSLMNGCRIHGNKELGLLA-----SEQILRMAPNSDGAYVSL--SHVY 628

Query: 703 LED 705
            ED
Sbjct: 629 AED 631



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 160/379 (42%), Gaps = 7/379 (1%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           + S+   L    LG Q+ G   + G+++++ + N  I M S+CG        F ++  RN
Sbjct: 216 TFSVMLRLSGASLGLQIFGLAYRHGYSDNVLVANAAINMLSRCGLLSCAYGYFCDLGVRN 275

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +V+W  +++    +G     ++++  +   G  P+EF   +V+        +     +H 
Sbjct: 276 VVTWNEMIAGYGLHGCSGDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHDARNHEQVHA 335

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             LK       FV  S++   A LG  V    ++       D+  W   I  +   G G 
Sbjct: 336 SVLKQGFASCQFVSTSLIKAKAALGSSVLGPLKIIQDAGEMDLVSWGVAISAFVKHGLGQ 395

Query: 229 EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           EAL++ +S   +     D++     L  C+  A     R IH L++R+     + + +AL
Sbjct: 396 EALSLFNSCRVDCPEKPDEFILGTILNACANAALIRQCRCIHSLVVRTGHSKHLCVSSAL 455

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPN 346
           +D Y K   +  A   F  ++ KD I +NT+   ++ +    +  SL+ +   L  + P 
Sbjct: 456 VDAYAKCGDITAAKGAFATVSTKDAIVYNTMLTAYANHGLIREVLSLYQEMTQLQLAAPT 515

Query: 347 HVTFSILLRQCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
             TF   +  C  L  ++ G  L    L+ H G        + LI +  R G +E A  V
Sbjct: 516 PATFVAAISACSHLGLVEQGKLLFSSMLSAH-GMNPTRANYACLIDLLARRGLLEEATGV 574

Query: 405 FDNVSYKN-ITTWNELLSG 422
              + ++     W  L++G
Sbjct: 575 IQAMPFQPWPAVWRSLMNG 593


>gi|449532970|ref|XP_004173450.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 453

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/418 (55%), Positives = 305/418 (72%)

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           +PNH+TFS+L RQCG LLD  LG Q   LA+H GFLDE  V SS+I MF + G +EM HS
Sbjct: 2   KPNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHS 61

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD++ +K ++ WN+ +  Y  N  + +  +TF ++   GV  N  TF  ++ET C+ EN
Sbjct: 62  VFDSLVFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFEN 121

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
             M  Q+H A +K GF S  Y+  SLIK Y+  G L++SFE  N  E +DMA++GA++S 
Sbjct: 122 PWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVIST 181

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           LVHQ + +EA+   + L+E+G+KPDE+  G+ILN C+   AY +TK+IH  V K+GF   
Sbjct: 182 LVHQNYMYEAIMFLNILMESGKKPDEFTFGSILNGCSCRAAYHQTKAIHSLVEKMGFGFH 241

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V+VASA+IDAYAKCGDI  A+ AF+QS  SNDVIVYN+++MAYAHHGL  EA++ F+KM+
Sbjct: 242 VHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMR 301

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           +A +QPSQA+FVSV+SAC H GLV++G  LF++M S Y M PS D YGCLVDMLSRNG+L
Sbjct: 302 IAKVQPSQASFVSVISACGHMGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFL 361

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            DA+++IE MPF P P + RSLLSGCRI+GN+ELG+W +EKLL L P+N A HVLLSK
Sbjct: 362 YDARYIIESMPFSPWPAILRSLLSGCRIYGNRELGQWTAEKLLSLAPQNLATHVLLSK 419



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 171/379 (45%), Gaps = 18/379 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L SR LG Q     V LGF ++  + +++I+M+S+ G       VFD +  + + +W   
Sbjct: 19  LDSR-LGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQF 77

Query: 117 VSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           + A   N  F+M   + +  +   G + NE+    +++             +HC +LK  
Sbjct: 78  ILAYSLNS-FEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAG 136

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
              + +V CS++  Y  +G + ++  +F  +   D+  + A+I    H  Y +EA+  ++
Sbjct: 137 FGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYEAIMFLN 196

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            ++  G   D++TF + L GCS  A +   + IH L+ +      + + +A+ID Y K  
Sbjct: 197 ILMESGKKPDEFTFGSILNGCSCRAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAKCG 256

Query: 296 GMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            +  A   FE+     DVI +N++   ++ +    +    F K  ++  +P+  +F  ++
Sbjct: 257 DIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVI 316

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS------LIYMFCRCGAVEMAHSVFDNV 408
             CG      +GL  Q  +L      + N+T S      L+ M  R G +  A  + +++
Sbjct: 317 SACGH-----MGLVEQGRSLFQTMKSDYNMTPSRDNYGCLVDMLSRNGFLYDARYIIESM 371

Query: 409 SYKNITTWNELLSGYCFNC 427
            +   + W  +L      C
Sbjct: 372 PF---SPWPAILRSLLSGC 387



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 147/326 (45%), Gaps = 3/326 (0%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF    + C ++ D  +G Q   L +         +++++I M+ +   M+    VF+ +
Sbjct: 7   TFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSVFDSL 66

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             K V +WN     +S N    +    F   +  G   N  TFSI++    K  +  +  
Sbjct: 67  VFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCR 126

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           QL C +L  GF   + V+ SLI  +   G++E +  +F+ +   ++ T+  ++S      
Sbjct: 127 QLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQN 186

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQMVGQIHGAIIKTGFSSCGYIC 486
              + +     + ESG + +  TF  ++  C CR+   Q    IH  + K GF    ++ 
Sbjct: 187 YMYEAIMFLNILMESGKKPDEFTFGSILNGCSCRAAYHQ-TKAIHSLVEKMGFGFHVHVA 245

Query: 487 SSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           S++I +Y   G + ++   F    +  D+  + +MM A  H G   EA+  F  +  A  
Sbjct: 246 SAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRIAKV 305

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSI 571
           +P +    +++++C  +G  ++ +S+
Sbjct: 306 QPSQASFVSVISACGHMGLVEQGRSL 331



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/317 (19%), Positives = 131/317 (41%), Gaps = 1/317 (0%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           PN      + + C  +  S  G+     A+ +       V  S+++ +++ G +     V
Sbjct: 3   PNHITFSVLFRQCGVLLDSRLGFQFFSLAVHLGFLDETRVLSSIISMFSQFGLMEMVHSV 62

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F S+    V  WN  I  Y+   +  EA    SS+L  G+  ++YTF   ++      + 
Sbjct: 63  FDSLVFKPVSAWNQFILAYSLNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENP 122

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            + RQ+H   +++       +  +LI  YI    ++ +F++F ++   D+ ++  +    
Sbjct: 123 WMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTL 182

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
                  +     +  + SG +P+  TF  +L  C           +  L    GF    
Sbjct: 183 VHQNYMYEAIMFLNILMESGKKPDEFTFGSILNGCSCRAAYHQTKAIHSLVEKMGFGFHV 242

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELLSGYCFNCCDADVLKTFCNIWE 441
           +V S++I  + +CG +  A   F+     N +  +N ++  Y  +    + ++TF  +  
Sbjct: 243 HVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGLAWEAIQTFEKMRI 302

Query: 442 SGVEVNGCTFFYVVETC 458
           + V+ +  +F  V+  C
Sbjct: 303 AKVQPSQASFVSVISAC 319


>gi|125578267|gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
          Length = 786

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/580 (38%), Positives = 353/580 (60%), Gaps = 8/580 (1%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
           +YA+ G + +A +VF  +   ++  W AM+      G          SM+  G   ++++
Sbjct: 31  YYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFS 90

Query: 249 FINALQGC-----SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
               L  C     S+ A + +GRQ+H L+I S +E + S++N+L+DMY ++   + A  V
Sbjct: 91  LATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASV 150

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F ++  KD +SWNT+F GF+ +++             +G +PN VTFS+LLR  G   + 
Sbjct: 151 FRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 210

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LGLQ+  LA   G+ D   V +++I M  RCG ++ A+  F +++++NI TWNE+++GY
Sbjct: 211 SLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGY 270

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  D ++ F ++   G   +  T+  V+     +   +   QIH  I+K GF+SC 
Sbjct: 271 GLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQ 330

Query: 484 YICSSLIKS-YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV- 541
           ++ +SLIK+    FG + +S +    + ++++ SWGA++SA +  G N E + +F+    
Sbjct: 331 FVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRG 390

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           ++  KPDE+IL T+LN+CA     +  + IH  V+K G +    VASAV+DAYAKCG+I 
Sbjct: 391 DSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEIT 450

Query: 602 GARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
            A  AF   S  +ND I+YNT++ AYA+HGL+ EA+ ++++M  A L P+ ATFV+++SA
Sbjct: 451 SAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATFVAILSA 510

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV++G L F +M S YGM P+   Y CLVD+L+R G L++AK VI+ MPFQP P 
Sbjct: 511 CSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPA 570

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+RSL++GCRIHGNK+LG  A+E++L + P +D A+V LS
Sbjct: 571 VWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLS 610



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 163/655 (24%), Positives = 287/655 (43%), Gaps = 53/655 (8%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG     F  N L   Y++ G     L+VFDEM  RNLVSWT +VSA+ +NG   +G +
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-----EFGYSIHCFALKIRIEKNPFVGCSV 186
            +V M  +GF PNEF++ +++  C SM  S       G  +HC  +   +E N  V  S+
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSL 134

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           ++ Y +      A  VF  I   D   WN M  G+AH          +  M   G   ++
Sbjct: 135 VDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNE 194

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            TF   L+      +  +G QI  L  R     ++ + NA+I+M  +   +D A+  F  
Sbjct: 195 VTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCS 254

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  +++++WN +  G+    +      LF   +  G RP+  T+S +L    +       
Sbjct: 255 LTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDH 314

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
            Q+  + L  GF   + V++SLI       G+V+ +  + ++     + +W  ++S +  
Sbjct: 315 EQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLK 374

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSC 482
           +  + +V+  F N++  G   N    F +        N  ++     IH  ++KTG S+ 
Sbjct: 375 HGLNDEVIFLF-NLFR-GDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNH 432

Query: 483 GYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
             + S+++ +Y   G++   +++F   + A   D   +  M++A  + G  HEA+ ++  
Sbjct: 433 FCVASAVVDAYAKCGEITSAESAFTAVSSATN-DAIMYNTMLTAYANHGLIHEALNLYEE 491

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + +A   P       IL++C+ +G  ++         KL F+T       ++ AY     
Sbjct: 492 MTKAKLNPTPATFVAILSACSHLGLVEQG--------KLAFST-------MLSAYG---- 532

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR              Y  L+   A  GL+ EA  + D M     QP  A + S+++
Sbjct: 533 MHPARAN------------YACLVDLLARKGLLDEAKGVIDAMP---FQPWPAVWRSLVN 577

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEIM 713
            C   G    G L   + +    M PS D  Y  L ++ + +G  + A+     M
Sbjct: 578 GCRIHGNKQLGVL---AAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRM 629


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 231/707 (32%), Positives = 380/707 (53%), Gaps = 8/707 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           RVL    H   V  G   D+FL N L+  YSK G  G   R+FD M  RNLVSW   +S 
Sbjct: 47  RVL-PPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISM 105

Query: 120 AIQNGEFDMGLKMYVDMKT------NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             Q+G  D  L ++    +      +G  PNEF + S ++ C    A+ FG  +H  A K
Sbjct: 106 YAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAK 165

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           + ++ N FVG +++N YAK G + AA  VF ++ + +   W A+I GY+  G    AL +
Sbjct: 166 LGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALEL 225

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  +G+  D++   +A   CS +   + GRQIHG   R+  E   S+VNALID+Y K
Sbjct: 226 FGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCK 285

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            S +  A ++F+ M +++++SW T+  G+ +N    +  S+F +   +G +P+    + +
Sbjct: 286 CSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSI 345

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  CG L  +  G Q+    +      +E V ++LI M+ +C  +  A +VF+ ++  + 
Sbjct: 346 LNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDA 405

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            ++N ++ GY         ++ F  +    ++ +  TF  ++       + ++  QIHG 
Sbjct: 406 ISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGL 465

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           I+K+G S   Y  S+LI  Y  F  +D++    +  +  DM  W AM+  L       EA
Sbjct: 466 IVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEA 525

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           V +F  L  +G  P+E+    ++   + + +    +  H  +IK G +++ ++++A+ID 
Sbjct: 526 VKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDM 585

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG I+  R+ F+ +    DVI +N++I  YA HG   EA+ +F  M+ A ++P+  T
Sbjct: 586 YAKCGFIEEGRLLFESTLG-KDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVT 644

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FVSV+SAC+H GLVD+G   F SM ++Y ++P  + Y  +V++  R+G L  AK  IE M
Sbjct: 645 FVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERM 704

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P +P  T++RSLLS C + GN E+G +A+E  LL  P +    VL+S
Sbjct: 705 PIEPVATIWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMS 751



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/588 (26%), Positives = 277/588 (47%), Gaps = 15/588 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            LA +L      ++   G QVHG   KLG   ++F+   L+ +Y+K G     + VFD +
Sbjct: 139 LLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDAL 198

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             RN V+WT +++   Q G+  + L+++  M  +G  P+ F + S    C  +G  E G 
Sbjct: 199 PARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGR 258

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH +A +   E +  V  ++++ Y K   +  A R+F S+ + ++  W  MI GY    
Sbjct: 259 QIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNS 318

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA+++   +   G   D +   + L  C  +A    GRQ+H  +I++++E    + N
Sbjct: 319 LDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKN 378

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALIDMY K   +  A  VFE +A+ D IS+N +  G++   +      +F K      +P
Sbjct: 379 ALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKP 438

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + +TF  LL       DL+L  Q+  L +  G   +    S+LI ++ +   V+ A  VF
Sbjct: 439 SLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVF 498

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
             +  +++  WN ++ G   N    + +K F  +  SG+  N  TF  +V       +  
Sbjct: 499 SLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIF 558

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMS 522
              Q H  IIK G  S  +I ++LI  Y   G ++     FE + G    D+  W +M+S
Sbjct: 559 HGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGK---DVICWNSMIS 615

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF-VIKLGF- 580
                GH  EA+ +F  +  AG +P+     ++L++CA  G     + +H F  +K  + 
Sbjct: 616 TYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVD--EGLHHFNSMKTKYA 673

Query: 581 ---NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
               TE Y  ++V++ + + G +  A+   ++        ++ +L+ A
Sbjct: 674 VEPGTEHY--ASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSA 719



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 213/422 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA + S    L     G Q+HG+  +    +D  + N LI +Y KC       
Sbjct: 234 VRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLAR 293

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD M  RNLVSWT +++  +QN      + M+  +   G+ P+ FA  S++  C S+ 
Sbjct: 294 RLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLA 353

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  +H   +K  +E + +V  ++++ YAK   +  A  VF +++ DD   +NAMI 
Sbjct: 354 AIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIE 413

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G    A+ +   M +  +     TF++ L   S  +D ++ +QIHGLI++S    
Sbjct: 414 GYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSL 473

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +   +ALID+Y K S +D A  VF  M ++D++ WN +  G ++N+   +   LF +  
Sbjct: 474 DLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLR 533

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           +SG  PN  TF  L+     L  +  G Q     +  G   + +++++LI M+ +CG +E
Sbjct: 534 VSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIE 593

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               +F++   K++  WN ++S Y  +    + L  F  +  +GVE N  TF  V+  C 
Sbjct: 594 EGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACA 653

Query: 460 RS 461
            +
Sbjct: 654 HA 655


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/706 (31%), Positives = 381/706 (53%), Gaps = 3/706 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWT 114
           +K  V G +VH HI++     D +  N LI MY +CG      +V++++   ER + SW 
Sbjct: 154 VKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWN 213

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +V   +Q G  +  LK+  +M+ +G          ++  C S  A E G  IH  A+K 
Sbjct: 214 AMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKA 273

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           R+  +  V   +LN YAK G +  A  VF  + +  V  W  +IGGYA CG+   A  + 
Sbjct: 274 RLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIF 333

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  EG+  ++ T+IN L   S  A    G+ +H  I+ +  E  +++  AL+ MY K 
Sbjct: 334 QKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKC 393

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
                  +VFE++ ++D+I+WNT+ GG +E  N  + + ++H+    G  PN +T+ ILL
Sbjct: 394 GSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILL 453

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C     L  G ++    +  GF+ + +V ++LI M+ RCG+++ A  +F+ +  K+I 
Sbjct: 454 NACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDII 513

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  ++ G   +   A+ L  F ++ ++G++ N  T+  ++  C          +IH  +
Sbjct: 514 SWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ G ++  ++ ++L+  Y   G + ++ +  +   + D+ ++ AM+          EA+
Sbjct: 574 IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEAL 633

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  L E G KPD+     +LN+CA  G+ +  K IH  V+K G+ ++  + +A++  Y
Sbjct: 634 KLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTY 693

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG    A + FD+    N VI +N +I   A HG   + +++F++MK+  ++P   TF
Sbjct: 694 AKCGSFSDALLVFDKMMKRN-VISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTF 752

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           VS++SACSH GL+++G   F SM   +G+ P+ + YGC+VD+L R G L++ + +I+ MP
Sbjct: 753 VSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMP 812

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           FQ +  ++ +LL  CRIHGN  + E A+E  L L P N A +V LS
Sbjct: 813 FQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALS 858



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/507 (26%), Positives = 244/507 (48%), Gaps = 7/507 (1%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            A++VV  +  +G  ++   ++  L+ C  V D   GR++H  II+         VNALI
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 289 DMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           +MYI+   ++ A +V+ ++   ++ V SWN +  G+ +     +   L  +    G    
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T   LL  C     L+ G ++   A+    L + NV + ++ M+ +CG++  A  VFD
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFD 303

Query: 407 NVSYKNITTWNELLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            +  K++ +W  ++ GY  +C  +++  + F  + + GV  N  T+  V+         +
Sbjct: 304 KMETKSVVSWTIIIGGYA-DCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               +H  I+  G  S   + ++L+K Y   G   +  +        D+ +W  M+  L 
Sbjct: 363 WGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G+  EA  I+H +   G  P++     +LN+C    A    + IH  V+K GF  ++ 
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V +A+I  YA+CG IK AR+ F++     D+I +  +I   A  GL +EA+ +F  M+ A
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVR-KDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L+P++ T+ S+++ACS    +D G  + + +  + G+         LV+M S  G ++D
Sbjct: 542 GLKPNRVTYTSILNACSSPAALDWGRRIHQQV-IEAGLATDAHVANTLVNMYSMCGSVKD 600

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIH 732
           A+ V + M  Q     Y +++ G   H
Sbjct: 601 ARQVFDRMT-QRDIVAYNAMIGGYAAH 626



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 10/187 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D +     L+   N  S     ++H  ++K G+ +D  L N L++ Y+KCG F   L
Sbjct: 644 LKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDAL 703

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD+M +RN++SW  I+    Q+G     L+++  MK  G  P+     S++  C   G
Sbjct: 704 LVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAG 763

Query: 160 ASEFGYSIHC-----FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
             E G    C     F +   IE     GC V +   + G +   E +  ++    +   
Sbjct: 764 LLEEGRRYFCSMSRDFGITPTIE---HYGCMV-DLLGRAGQLDEVEALIKTMPFQANTRI 819

Query: 214 WNAMIGG 220
           W A++G 
Sbjct: 820 WGALLGA 826


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/698 (30%), Positives = 379/698 (54%), Gaps = 2/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +++ HI K G   DIF++N LI MY+KCG      ++FD+M E+++ SW L++   +Q
Sbjct: 129 GERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G ++   K++  M  +   P++    S++  C      + G  ++   LK   + + FV
Sbjct: 189 HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N + K GD+  A +VF ++ + D+  W +MI G A  G   +A N+   M  EG+
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK  F++ L+ C+     + G+++H  +     +  I +  A++ MY K   M+ A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ +  ++V+SW  +  GF+++    +    F+K I SG  PN VTF  +L  C     
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q+Q   +  G+  ++ V ++L+ M+ +CG+++ AH VF+ +S +N+  WN +++ 
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITA 488

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + L TF  + + G++ N  TF  ++  C  S++ ++   +H  I+K G  S 
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ ++L+  +VN G L ++    N   + D+ SW  +++  V  G N  A   F  + E
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +G KPD+     +LN+CA+  A    + +H  + +  F+ +V V + +I  Y KCG I+ 
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F       +V  + ++I  YA HG   EA+E+F +M+   ++P   TFV  +SAC+
Sbjct: 669 AHQVF-HKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+++G   F+SM  ++ ++P  + YGC+VD+  R G L +A   I  M  +P   V+
Sbjct: 728 HAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVW 786

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  C++H N EL E A++K L L P ++   V+LS
Sbjct: 787 GALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/615 (24%), Positives = 312/615 (50%), Gaps = 11/615 (1%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G+F+  +++   + ++          +++++C+       G  I+    K  ++ + F+ 
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMR 148

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++N YAK G+  +A+++F  +   DV  WN ++GGY   G   EA  +   M+ + + 
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            DK TF++ L  C+   + D GR+++ LI+++  +  + +  ALI+M+IK   +  A KV
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ +  +D+++W ++  G + +    Q  +LF +    G +P+ V F  LLR C     L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G ++       G+  E  V ++++ M+ +CG++E A  VFD V  +N+ +W  +++G+
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +    F  + ESG+E N  TF  ++  C      +   QI   II+ G+ S  
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD 448

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y   G L ++        + ++ +W AM++A V       A+  F +L++ 
Sbjct: 449 RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G KP+     +ILN C +  + +  K +H  ++K G  ++++V++A++  +  CGD+  A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  F+      D++ +NT+I  +  HG    A + F  M+ + ++P + TF  +++AC+ 
Sbjct: 569 KNLFN-DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACAS 627

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDC---YGC-LVDMLSRNGYLEDAKHVIEIMPFQPSP 719
              + +G  L   +      + + DC    G  L+ M ++ G +EDA  V   +P + + 
Sbjct: 628 PEALTEGRRLHALI-----TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNV 681

Query: 720 TVYRSLLSGCRIHGN 734
             + S+++G   HG 
Sbjct: 682 YSWTSMIAGYAQHGR 696



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 258/525 (49%), Gaps = 5/525 (0%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           NA++   +  G   EA+ V+  +    I + + T+   LQ C    +   G +I+  I +
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S V+  I + N LI+MY K      A ++F+ M +KDV SWN L GG+ ++    +   L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
             + +    +P+  TF  +L  C    ++D G +L  L L  G+  +  V ++LI M  +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG +  A  VFDN+  +++ TW  +++G   +         F  + E GV+ +   F  +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C   E  +   ++H  + + G+ +  Y+ ++++  Y   G ++++ E  +  +  ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW AM++     G   EA   F+ ++E+G +P+     +IL +C++  A +R + I   
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +I+ G+ ++  V +A++  YAKCG +K A   F++  +  +V+ +N +I AY  H     
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-ISKQNVVAWNAMITAYVQHEQYDN 497

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL-FKSMDSQYGMQPSPDCYGCL 693
           A+  F  +    ++P+ +TF S+++ C     ++ G  + F  M +  G++        L
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNAL 555

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           V M    G L  AK++   MP +     + ++++G   HG  ++ 
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 245/540 (45%), Gaps = 34/540 (6%)

Query: 20  ATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDI 79
           A   R  + C   Q   +  ++ D +     L    + ++   G +VH  + ++G+  +I
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           ++   +++MY+KCG     L VFD +  RN+VSWT +++   Q+G  D     +  M  +
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  PN     S++  C S  A + G  I    ++     +  V  ++L+ YAK G +  A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RVF  IS  +V  WNAMI  Y        AL    ++L EGI  +  TF + L  C   
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              ++G+ +H LI+++ +E  + + NAL+ M++    +  A  +F  M  +D++SWNT+ 
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTII 587

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF ++         F     SG +P+ +TF+ LL  C     L  G +L  L     F 
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V + LI M+ +CG++E AH VF  +  KN+ +W  +++GY  +    + L+ F  +
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQM 707

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            + GV+ +  TF   +  C            H  +I+ G                     
Sbjct: 708 QQEGVKPDWITFVGALSACA-----------HAGLIEEGLH-----------------HF 739

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +  EF N   R  M  +G M+      G  +EAV     +++   +PD  + G +L +C
Sbjct: 740 QSMKEF-NIEPR--MEHYGCMVDLFGRAGLLNEAVEF---IIKMQVEPDSRVWGALLGAC 793


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 230/704 (32%), Positives = 374/704 (53%), Gaps = 2/704 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           + R L   +H      G  +D+FL N L+  YS  G       +FD M  RNLVSW  ++
Sbjct: 32  RLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVI 91

Query: 118 SAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           S   Q+G  D  + ++V   K +  +PNEF + SV++ C    A   G  +H  A+K+ +
Sbjct: 92  SMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDL 151

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N +VG +++N YAKLG +  A  VF+++       WN +I GYA  G G  AL +   
Sbjct: 152 DANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDR 211

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG+  D++   +A+  CS +   + GRQIHG   RS  E   S++N LID+Y K S 
Sbjct: 212 MGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSR 271

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A K+F+ M  ++++SW T+  G+ +N    +  ++F     +G +P+    + +L  
Sbjct: 272 LSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNS 331

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           CG L  +  G Q+    +      +E V ++LI M+ +C  +  A +VFD ++  +  ++
Sbjct: 332 CGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++ GY  N   A+ +  F  +    +  +  TF  ++         ++  QIHG IIK
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIK 451

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           +G S   Y  S+LI  Y     ++++    N     DM  W +M+          EA+ +
Sbjct: 452 SGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKL 511

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F+ L+ +G  P+E+    ++   + + +    +  H ++IK G + + +V++A+ID YAK
Sbjct: 512 FNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAK 571

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG IK  RM F +S    DVI +N++I  YA HG   EA+++F  M  A ++P+  TFV 
Sbjct: 572 CGFIKEGRMLF-ESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVG 630

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SAC+H G V +G   F SM S Y ++P  + Y  +V++  R+G L  AK  IE MP +
Sbjct: 631 VLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIK 690

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P+  V+RSLLS C + GN E+G +A+E  LL  P +   +VLLS
Sbjct: 691 PAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLS 734



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 279/585 (47%), Gaps = 9/585 (1%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            LA  L      K+  LG QVHG  VKL    ++++   LI +Y+K G     + VF  +
Sbjct: 122 LLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHAL 181

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R  V+W  +++   Q G   + L+++  M   G  P+ F + S +  C ++G  E G 
Sbjct: 182 PVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH +A +   E +  V   +++ Y K   ++AA ++F  +   ++  W  MI GY    
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNS 301

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           +  EA+ +  +M   G   D +   + L  C  +A    GRQIH  +I++++E    + N
Sbjct: 302 FNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKN 361

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALIDMY K   +  A  VF+ +A+ D IS+N +  G+S+N++  +  ++F +      RP
Sbjct: 362 ALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRP 421

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + +TF  LL      L ++L  Q+  L +  G   +    S+LI ++ +C  V  A +VF
Sbjct: 422 SLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVF 481

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + + YK++  WN ++ G+  N    + +K F  +  SG+  N  TF  +V       +  
Sbjct: 482 NMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMF 541

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMS 522
              Q H  IIK G  +  ++ ++LI  Y   G +      FE + G    D+  W +M++
Sbjct: 542 HGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE---DVICWNSMIT 598

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                GH  EA+ +F  + EA  +P+      +L++CA  G      + H   +K  ++ 
Sbjct: 599 TYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDI 657

Query: 583 EVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           E  +   ++V++ + + G +  A+   ++        V+ +L+ A
Sbjct: 658 EPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 217/422 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA ++S    L     G Q+HG+  +     D  + N LI +Y KC       
Sbjct: 217 VRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAAR 276

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD M  RNLVSWT ++S  +QN      + M+ +M   G+ P+ FA  S++  C S+ 
Sbjct: 277 KLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLA 336

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   +K  +E + +V  ++++ YAK   +  A  VF +++ DD   +NAMI 
Sbjct: 337 AIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIE 396

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY+      EA+N+   M F  +     TF++ L   S     ++ +QIHGLII+S    
Sbjct: 397 GYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSL 456

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +   +ALID+Y K S ++ A  VF  +  KD++ WN++  G ++N+   +   LF++ +
Sbjct: 457 DLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLL 516

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           LSG  PN  TF  L+     L  +  G Q     +  G  ++ +V+++LI M+ +CG ++
Sbjct: 517 LSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIK 576

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               +F++   +++  WN +++ Y  +    + L+ F  + E+ VE N  TF  V+  C 
Sbjct: 577 EGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACA 636

Query: 460 RS 461
            +
Sbjct: 637 HA 638



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 136/284 (47%), Gaps = 2/284 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR   +     L +S +  +  L  Q+HG I+K G + D++  + LI +YSKC       
Sbjct: 419 LRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAK 478

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ +  +++V W  ++    QN + +  +K++  +  +G  PNEF   +++ V  ++ 
Sbjct: 479 TVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLA 538

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G   H + +K  ++ +P V  ++++ YAK G +     +F S   +DV CWN+MI 
Sbjct: 539 SMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMIT 598

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVE 278
            YA  G+  EAL V   M    +  +  TF+  L  C+       G    + +    ++E
Sbjct: 599 TYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIE 658

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGG 321
             I    ++++++ +S  +  A +  ERM  K   + W +L   
Sbjct: 659 PGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/698 (30%), Positives = 378/698 (54%), Gaps = 2/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +++ HI K G   DIF+ N LI MY+KCG      ++FD+M E+++ SW L++   +Q
Sbjct: 129 GERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G ++   K++  M  +   P++    S++  C      + G  ++   LK   + + FV
Sbjct: 189 HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N + K GD+  A +VF ++ + D+  W +MI G A  G   +A N+   M  EG+
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK  F++ L+ C+     + G+++H  +     +  I +  A++ MY K   M+ A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ +  ++V+SW  +  GF+++    +    F+K I SG  PN VTF  +L  C     
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q+Q   +  G+  ++ V ++L+ M+ +CG+++ AH VF+ +S +N+  WN +++ 
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITA 488

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + L TF  + + G++ N  TF  ++  C  S++ ++   +H  I+K G  S 
Sbjct: 489 YVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESD 548

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ ++L+  +VN G L ++    N   + D+ SW  +++  V  G N  A   F  + E
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +G KPD+     +LN+CA+  A    + +H  + +  F+ +V V + +I  Y KCG I+ 
Sbjct: 609 SGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIED 668

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F       +V  + ++I  YA HG   EA+E+F +M+   ++P   TFV  +SAC+
Sbjct: 669 AHQVF-HKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACA 727

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+++G   F+SM  ++ ++P  + YGC+VD+  R G L +A   I  M  +P   V+
Sbjct: 728 HAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVW 786

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  C++H N EL E A++K L L P ++   V+LS
Sbjct: 787 GALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILS 824



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 153/614 (24%), Positives = 312/614 (50%), Gaps = 11/614 (1%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G+F+  +++   + ++          +++++C+       G  I+    K  ++ + F+ 
Sbjct: 89  GQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMW 148

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++N YAK G+  +A+++F  +   DV  WN ++GGY   G   EA  +   M+ + + 
Sbjct: 149 NTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            DK TF++ L  C+   + D GR+++ LI+++  +  + +  ALI+M+IK   +  A KV
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ +  +D+++W ++  G + +    Q  +LF +    G +P+ V F  LLR C     L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G ++       G+  E  V ++++ M+ +CG++E A  VFD V  +N+ +W  +++G+
Sbjct: 329 EQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGF 388

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +    F  + ESG+E N  TF  ++  C      +   QI   II+ G+ S  
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD 448

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y   G L ++        + ++ +W AM++A V       A+  F +L++ 
Sbjct: 449 RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G KP+     +ILN C +  + +  K +H  ++K G  ++++V++A++  +  CGD+  A
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  F+      D++ +NT+I  +  HG    A + F  M+ + ++P + TF  +++AC+ 
Sbjct: 569 KNLFN-DMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACAS 627

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDC---YGC-LVDMLSRNGYLEDAKHVIEIMPFQPSP 719
              + +G  L   +      + + DC    G  L+ M ++ G +EDA  V   +P + + 
Sbjct: 628 PEALTEGRRLHALI-----TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNV 681

Query: 720 TVYRSLLSGCRIHG 733
             + S+++G   HG
Sbjct: 682 YSWTSMITGYAQHG 695



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 258/525 (49%), Gaps = 5/525 (0%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           NA++   +  G   EA+ V+  +    I + + T+   LQ C    +   G +I+  I +
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S V+  I + N LI+MY K      A ++F+ M +KDV SWN L GG+ ++    +   L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
             + +    +P+  TF  +L  C    ++D G +L  L L  G+  +  V ++LI M  +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG +  A  VFDN+  +++ TW  +++G   +         F  + E GV+ +   F  +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C   E  +   ++H  + + G+ +  Y+ ++++  Y   G ++++ E  +  +  ++
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW AM++     G   EA   F+ ++E+G +P+     +IL +C++  A +R + I   
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +I+ G+ ++  V +A++  YAKCG +K A   F++  +  +V+ +N +I AY  H     
Sbjct: 439 IIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEK-ISKQNVVAWNAMITAYVQHEQYDN 497

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL-FKSMDSQYGMQPSPDCYGCL 693
           A+  F  +    ++P+ +TF S+++ C     ++ G  + F  M +  G++        L
Sbjct: 498 ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNAL 555

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           V M    G L  AK++   MP +     + ++++G   HG  ++ 
Sbjct: 556 VSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 245/540 (45%), Gaps = 34/540 (6%)

Query: 20  ATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDI 79
           A   R  + C   Q   +  ++ D +     L    + ++   G +VH  + ++G+  +I
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           ++   +++MY+KCG     L VFD +  RN+VSWT +++   Q+G  D     +  M  +
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  PN     S++  C S  A + G  I    ++     +  V  ++L+ YAK G +  A
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDA 467

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RVF  IS  +V  WNAMI  Y        AL    ++L EGI  +  TF + L  C   
Sbjct: 468 HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSS 527

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              ++G+ +H LI+++ +E  + + NAL+ M++    +  A  +F  M  +D++SWNT+ 
Sbjct: 528 DSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTII 587

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF ++         F     SG +P+ +TF+ LL  C     L  G +L  L     F 
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V + LI M+ +CG++E AH VF  +  KN+ +W  +++GY  +    + L+ F  +
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQM 707

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            + GV+ +  TF   +  C            H  +I+ G                     
Sbjct: 708 QQEGVKPDWITFVGALSACA-----------HAGLIEEGLH-----------------HF 739

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +  EF N   R  M  +G M+      G  +EAV     +++   +PD  + G +L +C
Sbjct: 740 QSMKEF-NIEPR--MEHYGCMVDLFGRAGLLNEAVEF---IIKMQVEPDSRVWGALLGAC 793


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/696 (32%), Positives = 370/696 (53%), Gaps = 3/696 (0%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG-- 124
           H   V  G   D+FL N L+  YSK G      R+FD M  +NLVSW   +S   Q+G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E  + L       + G  PNEF + S ++ C    A  FG  +H  A++I ++ N +VG 
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++N YAK+G + AA  VF ++   +   W A+I GY+  G G  AL +   M  +G+  
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D++   +A+  CS +   + GRQ HG   R  VE   S++NALID+Y K S +  A K+F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M +++++SW T+  G+ +N    +  ++F +    G +P+    + +L  CG L  + 
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+   A+      +E V +SLI M+ +C  +  A +VF+ ++  +  ++N ++ GY 
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                A  +  F  +    ++ +  TF  ++         ++  QIHG I+K+G S   Y
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLY 453

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             SSLI  Y  F  ++++    N     DM  W AM+  L       EAV +F+ L  +G
Sbjct: 454 AGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSG 513

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             P+E+    ++   + + +    +  H  +IK G +++ +V++A+ID YAKCG IK  R
Sbjct: 514 LAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGR 573

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           + F+ +    DVI +N++I  YA HG   EA+ +F  M    ++P+  TFV V+SAC+H 
Sbjct: 574 LLFESTLG-KDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F  M ++Y ++P  + Y  +V++  R+G L  AK  IE MP +P+  V+RS
Sbjct: 633 GLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRS 692

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C + GN E+G +A+E  LL  P +    VL+S
Sbjct: 693 LLSACHLFGNVEIGRYATEMALLADPADSGPSVLMS 728



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 217/422 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA ++S    L     G Q HG+  ++    D  + N LI +Y KC       
Sbjct: 211 VRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLAR 270

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD M  RNLVSWT +++  +QN      + M+  +   G+ P+ FA  S++  C S+ 
Sbjct: 271 KLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLA 330

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  +H  A+K  +E + +V  S+++ YAK   +  A  VF +++ DD   +NAMI 
Sbjct: 331 AIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIE 390

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY+  G    A++V S M +  +     TF++ L   S  +  ++ +QIHGLI++S    
Sbjct: 391 GYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSL 450

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +   ++LID+Y K S ++ A  VF  M ++D++ WN +  G ++N+   +   LF++  
Sbjct: 451 DLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQ 510

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           +SG  PN  TF  L+     L+ +  G Q     +  G   + +V+++LI M+ +CG ++
Sbjct: 511 VSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIK 570

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               +F++   K++  WN ++S Y  +    + L  F  +  +GVE N  TF  V+  C 
Sbjct: 571 EGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACA 630

Query: 460 RS 461
            +
Sbjct: 631 HA 632



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/628 (25%), Positives = 283/628 (45%), Gaps = 40/628 (6%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            LA +L      ++   G QVHG  V++G   ++++   LI +Y+K G     + VFD +
Sbjct: 116 LLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDAL 175

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             +N V+WT +++   Q G+  + L+++  M  +G  P+ F + S +  C ++G  E G 
Sbjct: 176 PVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGR 235

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
             H +A +I +E +  V  ++++ Y K   ++ A ++F  + + ++  W  MI GY    
Sbjct: 236 QTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNS 295

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA+ +   +  EG   D +   + L  C  +A    GRQ+H   I++ +E    + N
Sbjct: 296 CDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKN 355

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +LIDMY K   +  A  VFE +A+ D IS+N +  G+S   +      +F K      +P
Sbjct: 356 SLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKP 415

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + +TF  LL        ++L  Q+  L +  G   +    SSLI ++ +   VE A +VF
Sbjct: 416 SPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVF 475

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +  +++  WN ++ G   N    + +K F  +  SG+  N  TF  +V       +  
Sbjct: 476 NLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMF 535

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMS 522
              Q H  IIK G  S  ++ ++LI  Y   G +      FE + G    D+  W +M+S
Sbjct: 536 HGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGK---DVICWNSMIS 592

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                G   EA+ +F  +   G +P+      +L++CA  G                   
Sbjct: 593 TYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAG------------------- 633

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                  ++D   +  D    + A +          Y +++  +   G +  A E  ++M
Sbjct: 634 -------LVDEGLRHFDFMKTKYAIEPGTEH-----YASVVNLFGRSGKLHAAKEFIERM 681

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKG 670
               ++P+ A + S++SAC   G V+ G
Sbjct: 682 P---IEPAAAVWRSLLSACHLFGNVEIG 706



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 5/289 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           ++CS   L+  P+     L +S +  +  L  Q+HG IVK G + D++  ++LI +YSK 
Sbjct: 409 RYCS---LKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKF 465

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   VF+ M  R++V W  ++    QN + +  +K++  ++ +G  PNEF   +++
Sbjct: 466 SLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALV 525

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
            V  ++ +   G   H   +K   + +  V  ++++ YAK G +     +F S    DV 
Sbjct: 526 TVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVI 585

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGL 271
           CWN+MI  YA  G   EAL V   M   G+  +  TF+  L  C+     D G R    +
Sbjct: 586 CWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFM 645

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLF 319
             +  +E       ++++++ +S  +  A +  ERM  +   + W +L 
Sbjct: 646 KTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLL 694


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/707 (31%), Positives = 374/707 (52%), Gaps = 3/707 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA--ERNLVSW 113
            +K  V G QVH HI++     D +  N LI MY +CG      +V+ +++  ER + SW
Sbjct: 35  EVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSW 94

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             +V   IQ G  +  LK+   M+ +G  P+   + S +  C S GA E+G  IH  A++
Sbjct: 95  NAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQ 154

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  +  V   +LN YAK G +  A  VF  +    V  W   IGGYA CG    A  +
Sbjct: 155 AGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEI 214

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  EG+  ++ T+I+ L   S  A    G+ +H  I+ +  E   ++  AL+ MY K
Sbjct: 215 FQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK 274

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
                   +VFE++ ++D+I+WNT+ GG +E     + + ++++    G  PN +T+ IL
Sbjct: 275 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVIL 334

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C     L  G ++       GF  +  V ++LI M+ RCG+++ A  VFD +  K++
Sbjct: 335 LNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDV 394

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +W  ++ G   +   A+ L  +  + ++GVE N  T+  ++  C      +   +IH  
Sbjct: 395 ISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQ 454

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +++ G ++  ++ ++L+  Y   G + ++ +  +   + D+ ++ AM+          EA
Sbjct: 455 VVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEA 514

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  L E G KPD+     +LN+CA  G+ +  + IH  V K GF ++  V +A++  
Sbjct: 515 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVST 574

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG    A + F++    N VI +N +I   A HG   +A+++F++MK+  ++P   T
Sbjct: 575 YAKCGSFSDASIVFEKMTKRN-VISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVT 633

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FVS++SACSH GL+++G   F SM   + + P+ + YGC+VD+L R G L++A+ +I+ M
Sbjct: 634 FVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTM 693

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PFQ +  ++ +LL  CRIHGN  + E A+E  L L   N   +V LS
Sbjct: 694 PFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALS 740



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/614 (24%), Positives = 297/614 (48%), Gaps = 5/614 (0%)

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E D  + +   ++  G   N      ++K C+ +     G  +H   ++ R   + +   
Sbjct: 3   EKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN 62

Query: 185 SVLNFYAKLGDVAAAERVFYSIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           +++N Y + G +  A +V+  +S     V  WNAM+ GY   GY  +AL ++  M   G+
Sbjct: 63  ALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGL 122

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+ T ++ L  C      + GR+IH   +++ +   + + N +++MY K   ++ A +
Sbjct: 123 APDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEARE 182

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M  K V+SW    GG+++         +F K    G  PN +T+  +L        
Sbjct: 183 VFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAA 242

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +    L+ G   +  V ++L+ M+ +CG+ +    VF+ +  +++  WN ++ G
Sbjct: 243 LKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 302

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                   +  + +  +   GV  N  T+  ++  C  S       +IH  + K GF+S 
Sbjct: 303 LAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSD 362

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y   G + ++    +   R D+ SW AM+  L   G   EA+T++  + +
Sbjct: 363 IGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ 422

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           AG +P+     +ILN+C++  A +  + IH  V++ G  T+ +V + +++ Y+ CG +K 
Sbjct: 423 AGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKD 482

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD+     D++ YN +I  YA H L  EA+++FD+++   L+P + T++++++AC+
Sbjct: 483 ARQVFDRMIQ-RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           + G ++    +  ++  + G          LV   ++ G   DA  V E M  + +   +
Sbjct: 542 NSGSLEWAREIH-TLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVISW 599

Query: 723 RSLLSGCRIHGNKE 736
            +++ G   HG  +
Sbjct: 600 NAIIGGSAQHGRGQ 613



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 10/187 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D +     L+   N  S     ++H  + K GF +D  + N L++ Y+KCG F    
Sbjct: 526 LKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDAS 585

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF++M +RN++SW  I+  + Q+G     L+++  MK  G  P+     S++  C   G
Sbjct: 586 IVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAG 645

Query: 160 ASEFGYSIHC-----FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
             E G    C     FA+   IE     GC V +   + G +  AE +  ++    +   
Sbjct: 646 LLEEGRRYFCSMSQDFAIIPTIE---HYGCMV-DLLGRAGQLDEAEALIKTMPFQANTRI 701

Query: 214 WNAMIGG 220
           W A++G 
Sbjct: 702 WGALLGA 708


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 226/716 (31%), Positives = 391/716 (54%), Gaps = 5/716 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +++L L  + K+   G Q+H H +K   + + +FL    + MY KCG F   ++VFD+M+
Sbjct: 50  SQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMS 109

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ER + +W  ++ A +  G +   +++Y +M+  G   + F    V+K C +      G  
Sbjct: 110 ERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCE 169

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS--ISSDDVGCWNAMIGGYAHC 224
           IH  A+K       FV  +++  YAK GD+  A  +F S  +  DD   WN++I  +   
Sbjct: 170 IHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGE 229

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL++   M   G+  + YTF++ALQ C       IGR IH +I++S     + + 
Sbjct: 230 GESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVS 289

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NALI MY     M+ A +VF+ M  KD +SWNTL  G  +N       + F     SG +
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ V+   ++   G+  +L  G+++   A+  G     ++ +SLI M+ +C  V+   S 
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  K++ +W  +++GY  N C  D L     +    ++V+      ++  C   +++
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSE 469

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +++ +IHG ++K G +    I ++++  Y     +D +          D+ SW +M++  
Sbjct: 470 KLIKEIHGYVLKGGLADI-LIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCC 528

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           VH G   EA+ +F+SL+E   +PD   L ++L + AA+ + ++ K IH F+I+ GF  E 
Sbjct: 529 VHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEG 588

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            +A++++D YA+CG ++ AR  F+      D+I++ ++I A   HG   +A+++F KM  
Sbjct: 589 LIANSLVDMYARCGTMENARNIFNY-VKQRDLILWTSMINANGMHGCGKDAIDLFSKMTD 647

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
            N+ P   TF++++ ACSH GLV +G   F+ M ++Y ++P P+ Y CLVD+L+R+  LE
Sbjct: 648 ENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLE 707

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A H +  MP +PS  V+ +LL  CRIH N +LGE A++KLL L  +N   +VL+S
Sbjct: 708 EAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVS 763



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 1/325 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q   DS  + D + +   ++ S    + + G +VH + +K G  +++ + N+LI MY KC
Sbjct: 341 QDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKC 400

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
               +    F+ M E++L+SWT I++   QN      L +   ++      +   +GS++
Sbjct: 401 CCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSIL 460

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C  + + +    IH + LK  +  +  +  +++N Y +L  V  A  VF SI+S D+ 
Sbjct: 461 LACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIV 519

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W +MI    H G   EAL + +S++   I  D  T ++ L   + ++    G++IHG +
Sbjct: 520 SWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFL 579

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           IR        I N+L+DMY +   M+ A  +F  +  +D+I W ++      +       
Sbjct: 580 IRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAI 639

Query: 333 SLFHKFILSGSRPNHVTFSILLRQC 357
            LF K       P+H+TF  LL  C
Sbjct: 640 DLFSKMTDENVLPDHITFLALLYAC 664



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 61/123 (49%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           ++ +  D I L   L  +  L S   G ++HG +++ GF  +  + N+L+ MY++CG   
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F+ + +R+L+ WT +++A   +G     + ++  M     +P+     +++  C 
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665

Query: 157 SMG 159
             G
Sbjct: 666 HSG 668


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/699 (30%), Positives = 375/699 (53%), Gaps = 1/699 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           L  ++H   +  G +    + N LI +Y+K G+     RVF+E++ R+ VSW  ++S   
Sbjct: 60  LVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYA 119

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  +++Y +M  +G +P  + + S++  C      + G  IH    K       F
Sbjct: 120 QNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ Y +      A+RVF  +   D   +N +I G+A CG+G  AL +   M   G
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D  T  + L  CS V D   G+Q+H  ++++ +     +  +L+D+Y+KS  ++ A 
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+     +V+ WN +   + +  +  ++  +F++ + +G RPN  T+  +LR C    
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           ++ LG Q+  L +  GF  +  V+  LI M+ + G ++ A  + D +  K++ +W  +++
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  +    + L+TF  +   G+  +       +  C   +      QIH  +  +G+S+
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I + L+  Y   G    +F      E  +  +W  ++S     G   EA+ +F  + 
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +AG K + +   + +++ A +   ++ K IH  VIK G+ +E  +++A+I  Y KCG I+
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIE 599

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+M F +    N+V  +NT+I   + HG   EA+++FD+MK   L+PS  TFV V++AC
Sbjct: 600 DAKMDFFEMTKRNEV-SWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTAC 658

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLV++G   FKSM +++G+ P PD Y C+VD+L R G L+ AK  +E MP      V
Sbjct: 659 SHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMV 718

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +R+LLS C++H N E+GE+A++ LL L P + A++VLLS
Sbjct: 719 WRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLS 757



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 159/639 (24%), Positives = 303/639 (47%), Gaps = 34/639 (5%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     +   LG  +H  + K GF ++ F+ N LI++Y +C  F    RVF 
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M   + V++  ++S   Q G  D  L ++ +M+ +G  P+   + S++  C ++G    
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + LK  +  +  +  S+L+ Y K GD+  A ++F S    +V  WN M+  Y  
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++ ++   ML  G+  +K+T+   L+ C+   +  +G QIH L I++  +  + +
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   +D A ++ + + +KDV+SW ++  G+ +++   +    F +    G 
Sbjct: 383 SGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  G Q+       G+  + ++ + L+Y++ RCG  + A S
Sbjct: 443 WPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ + +K   TWN L+SG+  +    + LK F  + ++G + N  TF   +       +
Sbjct: 503 SFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLAD 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS----FEFSNGAERLDMASWGA 519
            +   QIH  +IKTG++S   I ++LI  Y   G ++++    FE +   E     SW  
Sbjct: 563 IKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNE----VSWNT 618

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR----------TK 569
           +++     G   EA+ +F  + + G KP +     +L +C+ +G  +             
Sbjct: 619 IITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEH 678

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IHP         + Y  + V+D   + G +  A+   ++     D +V+ TL+ A   H
Sbjct: 679 GIHP-------RPDHY--ACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVH 729

Query: 630 GLVSEAMEI--FDKMKLANLQP-SQATFVSVMSACSHKG 665
               + +EI  F    L  L+P   A++V + +A +  G
Sbjct: 730 ----KNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTG 764



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 197/426 (46%), Gaps = 10/426 (2%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  D + +A  L+    +     G Q+H +++K G + D  ++ +L+ +Y K G    
Sbjct: 238 SGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEE 297

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L++FD     N+V W L++ A  Q  +      ++  M   G  PN+F    +++ C  
Sbjct: 298 ALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTH 357

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            G    G  IH   +K   + + +V   +++ Y+K G +  A+R+   I   DV  W +M
Sbjct: 358 TGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSM 417

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY    +  EAL     M   GI  D     +A+  C+ +     G QIH  +  S  
Sbjct: 418 IAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGY 477

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +SI N L+ +Y +      AF  FE +  K+ I+WN L  GF+++    +   +F K
Sbjct: 478 SADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMK 537

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +G++ N  TF   +     L D+  G Q+    +  G+  E  ++++LI ++ +CG+
Sbjct: 538 MDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGS 597

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA-----DVLKTFCNIWESGVEVNGCTFF 452
           +E A   F  ++ +N  +WN +++     CC       + L  F  + + G++ +  TF 
Sbjct: 598 IEDAKMDFFEMTKRNEVSWNTIIT-----CCSQHGRGLEALDLFDQMKQQGLKPSDVTFV 652

Query: 453 YVVETC 458
            V+  C
Sbjct: 653 GVLTAC 658



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 131/293 (44%), Gaps = 14/293 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA ++S    +K+   G+Q+H  +   G++ D+ + N L+ +Y++CG        F
Sbjct: 445 DNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSF 504

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + +  +  ++W  ++S   Q+G ++  LK+++ M   G   N F   S +    ++   +
Sbjct: 505 EAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIK 564

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K        +  ++++ Y K G +  A+  F+ ++  +   WN +I   +
Sbjct: 565 QGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCS 624

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRS 275
             G G EAL++   M  +G+     TF+  L  CS V   + G          HG+  R 
Sbjct: 625 QHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRP 684

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +    +      +D+  ++  +D A +  E M    D + W TL      +KN
Sbjct: 685 DHYACV------VDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKN 731


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 364/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   V  G      + N LI +YSK G      RVF+E++ R+ VSW  ++S   QNG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L +Y  M   G +P  + + SV+  C        G  IH    K       FVG 
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +V+  Y + G    AERVF  +   D   +N +I G+A CG+G  AL +   M F G++ 
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ + D   G Q+H  + ++ +     +  +L+D+Y+K   ++ A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   F +  +  ++  LF +   +G RPN  T+  +LR C    ++D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ + G +E A  V + +  K++ +W  +++GY 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            + C  D L  F  + + G+  +       +  C      +   QIH  I  +G+S    
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  +F      E  D  +W  ++S     G + EA+ +F  + ++G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + L++ A +   ++ K IH  VIK G + E  V +A+I  Y KCG  + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA+++FD+MK   ++P+  TF+ V++ACSH 
Sbjct: 603 MEFSEMSERNEV-SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   FKSM  +YG++P PD Y C++D+  R G L+ AK  IE MP      V+R+
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE+A++ LL L P + A++VLLS
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 302/620 (48%), Gaps = 6/620 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     +    G  +H    K GF ++IF+ N +I +Y +CG F    RVF 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ V++  ++S   Q G  +  L+++ +M+ +G  P+   + S++  C S+G  + 
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K  I  +  +  S+L+ Y K GDV  A  +F S    +V  WN M+  +  
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +++T+   L+ C+   + D+G QIH L +++  E  + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   ++ A +V E + +KDV+SW ++  G+ +++      + F +    G 
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG +  A S
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ + +K+  TWN L+SG+  +    + LK F  + +SGV+ N  TF   +        
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG S    + ++LI  Y   G   D   EFS  +ER ++ SW  +++
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNTIIT 621

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFN 581
           +    G   EA+ +F  + + G KP++     +L +C+ +G  +   S       + G  
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
                 + VID + + G +  A+   ++   + D +V+ TL+ A   H  + E  E F  
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNI-EVGE-FAA 739

Query: 642 MKLANLQP-SQATFVSVMSA 660
             L  L+P   A++V + +A
Sbjct: 740 KHLLELEPHDSASYVLLSNA 759



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 205/440 (46%), Gaps = 7/440 (1%)

Query: 26  HRLCGNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           H  CG+ +   + F       L  D + ++  L+   +L     GTQ+H ++ K G ++D
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
             ++ +L+ +Y KCG     L +F+     N+V W L++ A  Q  +     +++  M+ 
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  PN+F    +++ C      + G  IH  ++K   E + +V   +++ Y+K G +  
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RV   +   DV  W +MI GY       +AL     M   GI  D     +A+ GC+ 
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           +     G QIH  I  S     +SI NAL+++Y +   +  AF  FE +  KD I+WN L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             GF+++    +   +F +   SG + N  TF   L     L ++  G Q+    +  G 
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             E  V ++LI ++ +CG+ E A   F  +S +N  +WN +++    +    + L  F  
Sbjct: 579 SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQ 638

Query: 439 IWESGVEVNGCTFFYVVETC 458
           + + G++ N  TF  V+  C
Sbjct: 639 MKKEGIKPNDVTFIGVLAAC 658



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 14/293 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA ++S    + +   G Q+H  I   G++ D+ + N L+ +Y++CG        F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +E+  ++ ++W  +VS   Q+G  +  LK+++ M  +G   N F   S +    ++   +
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K        VG ++++ Y K G    A+  F  +S  +   WN +I   +
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HGLIIRS 275
             G G EAL++   M  EGI  +  TFI  L  CS V   + G          +G+  R 
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +    +      ID++ ++  +D A K  E M    D + W TL      +KN
Sbjct: 685 DHYACV------IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)

Query: 556 LNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +C   G  +Q    IH   +  G      V + +ID Y+K G +  AR  F++  ++ 
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE-LSAR 106

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +  ++  YA +GL  EA+ ++ +M  A + P+     SV+S+C+   L  +G L+ 
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            +   ++G          ++ +  R G    A+ V   MP + + T + +L+SG
Sbjct: 167 -AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVT-FNTLISG 218


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 364/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   V  G      + N LI +YSK G      RVF+E++ R+ VSW  ++S   QNG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L +Y  M   G +P  + + SV+  C        G  IH    K       FVG 
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +V+  Y + G    AERVF  +   D   +N +I G+A CG+G  AL +   M F G++ 
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ + D   G Q+H  + ++ +     +  +L+D+Y+K   ++ A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   F +  +  ++  LF +   +G RPN  T+  +LR C    ++D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ + G +E A  V + +  K++ +W  +++GY 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            + C  D L  F  + + G+  +       +  C      +   QIH  I  +G+S    
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  +F      E  D  +W  ++S     G + EA+ +F  + ++G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + L++ A +   ++ K IH  VIK G + E  V +A+I  Y KCG  + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA+++FD+MK   ++P+  TF+ V++ACSH 
Sbjct: 603 MEFSEMSERNEV-SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   FKSM  +YG++P PD Y C++D+  R G L+ AK  IE MP      V+R+
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE+A++ LL L P + A++VLLS
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 302/620 (48%), Gaps = 6/620 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     +    G  +H    K GF ++IF+ N +I +Y +CG F    RVF 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ V++  ++S   Q G  +  L+++ +M+ +G  P+   + S++  C S+G  + 
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K  I  +  +  S+L+ Y K GDV  A  +F S    +V  WN M+  +  
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +++T+   L+ C+   + D+G QIH L +++  E  + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   ++ A +V E + +KDV+SW ++  G+ +++      + F +    G 
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG +  A S
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ + +K+  TWN L+SG+  +    + LK F  + +SGV+ N  TF   +        
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG S    + ++LI  Y   G   D   EFS  +ER ++ SW  +++
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNTIIT 621

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFN 581
           +    G   EA+ +F  + + G KP++     +L +C+ +G  +   S       + G  
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
                 + VID + + G +  A+   ++   + D +V+ TL+ A   H  + E  E F  
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNI-EVGE-FAA 739

Query: 642 MKLANLQP-SQATFVSVMSA 660
             L  L+P   A++V + +A
Sbjct: 740 KHLLELEPHDSASYVLLSNA 759



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 205/440 (46%), Gaps = 7/440 (1%)

Query: 26  HRLCGNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           H  CG+ +   + F       L  D + ++  L+   +L     GTQ+H ++ K G ++D
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
             ++ +L+ +Y KCG     L +F+     N+V W L++ A  Q  +     +++  M+ 
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  PN+F    +++ C      + G  IH  ++K   E + +V   +++ Y+K G +  
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RV   +   DV  W +MI GY       +AL     M   GI  D     +A+ GC+ 
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           +     G QIH  I  S     +SI NAL+++Y +   +  AF  FE +  KD I+WN L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             GF+++    +   +F +   SG + N  TF   L     L ++  G Q+    +  G 
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             E  V ++LI ++ +CG+ E A   F  +S +N  +WN +++    +    + L  F  
Sbjct: 579 SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQ 638

Query: 439 IWESGVEVNGCTFFYVVETC 458
           + + G++ N  TF  V+  C
Sbjct: 639 MKKEGIKPNDVTFIGVLAAC 658



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 14/293 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA ++S    + +   G Q+H  I   G++ D+ + N L+ +Y++CG        F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +E+  ++ ++W  +VS   Q+G  +  LK+++ M  +G   N F   S +    ++   +
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K        VG ++++ Y K G    A+  F  +S  +   WN +I   +
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HGLIIRS 275
             G G EAL++   M  EGI  +  TFI  L  CS V   + G          +G+  R 
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +    +      ID++ ++  +D A K  E M    D + W TL      +KN
Sbjct: 685 DHYACV------IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)

Query: 556 LNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +C   G  +Q    IH   +  G      V + +ID Y+K G +  AR  F++  ++ 
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE-LSAR 106

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +  ++  YA +GL  EA+ ++ +M  A + P+     SV+S+C+   L  +G L+ 
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            +   ++G          ++ +  R G    A+ V   MP + + T + +L+SG
Sbjct: 167 -AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVT-FNTLISG 218


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 216/679 (31%), Positives = 372/679 (54%), Gaps = 3/679 (0%)

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            +I  Y + G       +F EM+  ++V+W +++S   + G   + ++ + +M+ +    
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
               +GSV+     +   + G  +H  A+K+ +  N +VG S+++ Y+K   + AA +VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            ++   +   WNAMI GYAH G   + + +   M   G  +D +TF + L  C+   D +
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G Q H +II+ ++  ++ + NAL+DMY K   ++ A ++FERM D+D ++WNT+ G + 
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +++N  +   LF +  L G   +    +  L+ C  +  L  G Q+ CL++ CG   + +
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             SSLI M+ +CG ++ A  VF ++   ++ + N L++GY  N  +  V+  F  +   G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRG 624

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVN-FGQLDN 501
           V  +  TF  +VE C + E+  +  Q HG I K GFSS G Y+  SL+  Y+N  G  + 
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
              FS  +    +  W  MMS     G   EA+  +  +   G  PD+    T+L  C+ 
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + + +  ++IH  +  L  + +   ++ +ID YAKCGD+KG+   FD+    ++V+ +N+
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNS 804

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           LI  YA +G   +A++IFD M+ +++ P + TF+ V++ACSH G V  G  +F+ M  QY
Sbjct: 805 LINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY 864

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           G++   D   C+VD+L R GYL++A   IE    +P   ++ SLL  CRIHG+   GE +
Sbjct: 865 GIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEIS 924

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +EKL+ L P+N +A+VLLS
Sbjct: 925 AEKLIELEPQNSSAYVLLS 943



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 276/604 (45%), Gaps = 41/604 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VH   + LG  ++  L N ++ +Y+KC    +  + FD + E+++ +W  ++S   
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+    L+ +V +  N   PN+F    V+  C      EFG  IHC  +K+ +E+N +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G ++++ YAK   ++ A RVF  I   +  CW  +  GY   G   EA+ V   M  EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D   F+                                    +I+ YI+   +  A 
Sbjct: 257 HRPDHLAFVT-----------------------------------VINTYIRLGKLKDAR 281

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  M+  DV++WN +  G  +          F     S  +    T   +L   G + 
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +LDLGL +   A+  G      V SSL+ M+ +C  +E A  VF+ +  KN   WN ++ 
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N     V++ F ++  SG  ++  TF  ++ TC  S + +M  Q H  IIK   + 
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461

Query: 482 CGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             ++ ++L+  Y   G L+++ + F    +R D  +W  ++ + V   +  EA  +F  +
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWNTIIGSYVQDENESEAFDLFKRM 520

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G   D   L + L +C  +    + K +H   +K G + +++  S++ID Y+KCG I
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K AR  F  S     V+  N LI  Y+ + L  EA+ +F +M    + PS+ TF +++ A
Sbjct: 581 KDARKVF-SSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638

Query: 661 CSHK 664
           C HK
Sbjct: 639 C-HK 641



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 165/631 (26%), Positives = 298/631 (47%), Gaps = 9/631 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VH   +KLG  ++I++ ++L++MYSKC       +VF+ + E+N V W  ++    
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NGE    +++++DMK++G+  ++F   S++  C +    E G   H   +K ++ KN F
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ YAK G +  A ++F  +   D   WN +IG Y       EA ++   M   G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D     + L+ C+ V     G+Q+H L ++  ++  +   ++LIDMY K   +  A 
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF  + +  V+S N L  G+S+N N  +   LF + +  G  P+ +TF+ ++  C K  
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643

Query: 362 DLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
            L LG Q        GF  E E +  SL+ M+     +  A ++F  +S  K+I  W  +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SG+  N    + LK +  +   GV  +  TF  V+  C    + +    IH  I     
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                  ++LI  Y   G +  S + F     R ++ SW ++++     G+  +A+ IF 
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKC 597
           S+ ++   PDE     +L +C+  G     + I   +I + G    V   + ++D   + 
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVS 656
           G ++ A    +      D  ++++L+ A   HG   +        KL  L+P  ++ +V 
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHG--DDIRGEISAEKLIELEPQNSSAYVL 941

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           + +  + +G  +K   L K M  + G++  P
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDR-GVKKVP 971



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/588 (25%), Positives = 265/588 (45%), Gaps = 57/588 (9%)

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           K++   K    MP   A+           A   G ++H  +L + I+    +G ++++ Y
Sbjct: 57  KLFKSRKVFDEMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK   V+ AE+ F      DV  WN+M+  Y+  G   + L    S+    I  +K+TF 
Sbjct: 106 AKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             L  C+   + + GRQIH  +I+  +E +     AL+DMY K   +  A +VFE + D 
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           + + W  LF G+ +   P +   +F +    G RP+H+ F                    
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-------------------- 264

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
                           ++I  + R G ++ A  +F  +S  ++  WN ++SG+    C+ 
Sbjct: 265 ---------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             ++ F N+ +S V+    T   V+       N  +   +H   IK G +S  Y+ SSL+
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y    +++ + +     E  +   W AM+    H G +H+ + +F  +  +G   D++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              ++L++CAA    +     H  +IK      ++V +A++D YAKCG ++ AR  F++ 
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            + ++V  +NT+I +Y      SEA ++F +M L  +    A   S + AC+H   + +G
Sbjct: 490 CDRDNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548

Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
               CL  K      G+         L+DM S+ G ++DA+ V   +P
Sbjct: 549 KQVHCLSVKC-----GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA +L    ++     G QVH   VK G   D+   ++LI MYSKCG      +VF  + 
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E ++VS   +++   QN   +  + ++ +M T G  P+E    ++++ C    +   G  
Sbjct: 592 EWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650

Query: 167 IHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHC 224
            H    K     +  ++G S+L  Y     +  A  +F  +SS   +  W  M+ G++  
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  EAL     M  +G+  D+ TF+  L+ CS+++    GR IH LI     +      
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770

Query: 285 NALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           N LIDMY K   M  + +VF+ M  + +V+SWN+L  G+++N        +F     S  
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830

Query: 344 RPNHVTFSILLRQC---GKLLD 362
            P+ +TF  +L  C   GK+ D
Sbjct: 831 MPDEITFLGVLTACSHAGKVSD 852



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 4/160 (2%)

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K++H   + LG ++E  + +A++D YAKC  +  A   FD  F   DV  +N+++  Y+ 
Sbjct: 80  KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD--FLEKDVTAWNSMLSMYSS 137

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
            G   + +  F  +    + P++ TF  V+S C+ +  V+ G  +  SM  + G++ +  
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSY 196

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           C G LVDM ++   + DA+ V E +   P+   +  L SG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG 235


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/721 (31%), Positives = 386/721 (53%), Gaps = 7/721 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ +    A  + L   +K   +G  +HG +VK GF++D FL   LI+MY+  G      
Sbjct: 252 LKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIAR 311

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD  AE+N+V W  ++SA  QN +     KM+  M      PN     S++  C +  
Sbjct: 312 DLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSA 371

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              +G S+H   +K R++    V  ++L+ YAKLGD+ +A+ +FY +   ++  WN+MI 
Sbjct: 372 NFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMIS 431

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY H G    +++    M FEG   D  + +N L  CS +    +G+  H    R E + 
Sbjct: 432 GYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDS 491

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +++I NAL+  Y     +  +FK+F++M  ++ ISWNTL  G   N +  +  +L HK  
Sbjct: 492 NLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQ 551

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
                 + VT   ++  C    +L  G+ L   A+  GF  + ++ ++LI M+  CG + 
Sbjct: 552 QEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDIN 611

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               +F+ + +++I +WN L++GY F+    +V+ +FC +   G + N  T   ++ + C
Sbjct: 612 AGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPS-C 670

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWG 518
           R+  Q     IH   ++TG      I +SLI  Y  F  +++  F F  G +  D+A W 
Sbjct: 671 RTLLQG--KSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE-DIALWN 727

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           A+MS  V   +  E+VT F  L+ A  +PD     +++++C  + +   + S+  +VI+ 
Sbjct: 728 AIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQK 787

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF+  + +++A+ID +A+CG+I  A+  F +  +S D + ++T+I  Y  HG    A+ +
Sbjct: 788 GFDKHIVISNALIDLFARCGNISIAKKIF-EGLSSKDAVSWSTMINGYGLHGDSEAALAL 846

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
             +M+L+ ++P   T+ SV+SACSH G +D+G ++F SM  + G+    + Y C+VD+L 
Sbjct: 847 LSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLG 905

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L +A   +E +P +PS ++  SLL  C IHGN +LGE  S  L  L PKN  ++V+
Sbjct: 906 RTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVM 965

Query: 759 L 759
           L
Sbjct: 966 L 966



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/676 (23%), Positives = 317/676 (46%), Gaps = 16/676 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH  +++  F  ++ +Q  L+  Y+K G       V D++++ +LV+W  ++S    NG 
Sbjct: 177 VHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGF 236

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
                ++   +   G  PN     S++ +C  M   + G SIH F +K     + F+  +
Sbjct: 237 DKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPA 296

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YA  G++  A  +F S +  +V  WN+MI  YA      EA  +   ML   +  +
Sbjct: 297 LISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPN 356

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             TF++ +  C   A+F  G+ +H  +++  ++  +S+  AL+ MY K   ++ A  +F 
Sbjct: 357 VVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFY 416

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           +M  ++++SWN++  G+  N     +   F      G  P+ ++   +L  C KL  + L
Sbjct: 417 QMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILL 476

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G      +    F    N++++L+  +  CG +  +  +F  +  +N  +WN L+SG   
Sbjct: 477 GKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVH 536

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N      +     + +  +E++  T   ++  C  +EN      +HG  IKTGF+    +
Sbjct: 537 NGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSL 596

Query: 486 CSSLIKSYVNFGQLD-NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
            ++LI  Y N G ++   F F     R  + SW A+++        +E +  F  ++  G
Sbjct: 597 VNALISMYFNCGDINAGKFLFEVMPWR-SIVSWNALITGYRFHYLQNEVMASFCQMIREG 655

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           +KP+   L  +L SC  +    + KSIH F ++ G   E  + +++I  YA+  +I    
Sbjct: 656 QKPNYVTLLNLLPSCRTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFI 712

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+      D+ ++N ++  Y       E++  F ++  A ++P   TF+S++SAC   
Sbjct: 713 FLFEMG-GKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISAC--- 768

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
             V    L   +    Y +Q   D +      L+D+ +R G +  AK + E +  + + +
Sbjct: 769 --VQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVS 826

Query: 721 VYRSLLSGCRIHGNKE 736
            + ++++G  +HG+ E
Sbjct: 827 -WSTMINGYGLHGDSE 841



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 139/564 (24%), Positives = 269/564 (47%), Gaps = 1/564 (0%)

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L  F+ + + ++    L++     +G F+  L +Y+  +  G   ++F    V+K C +
Sbjct: 108 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTA 167

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +GA      +HC  L+   E+N  +  ++++FYAK G +  A  V   IS  D+  WNA+
Sbjct: 168 LGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNAL 227

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY+  G+  E   V+  +   G+  +  TF + +  C+ +   DIG+ IHG +++S  
Sbjct: 228 ISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGF 287

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                +  ALI MY     +  A  +F+  A+K+V+ WN++   +++N+   +   +F +
Sbjct: 288 SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQ 347

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            + +  +PN VTF  ++  C    +   G  L    +      + +V ++L+ M+ + G 
Sbjct: 348 MLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGD 407

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A  +F  +  +N+ +WN ++SGY  N      +  FC++   G + +  +   ++  
Sbjct: 408 LNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSA 467

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C + E   +    H    +  F S   I ++L+  Y + G+L +SF+        +  SW
Sbjct: 468 CSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISW 527

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
             ++S  VH G   +AV + H + +   + D   L +I+  C       +  ++H + IK
Sbjct: 528 NTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIK 587

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            GF  +V + +A+I  Y  CGDI   +  F +      ++ +N LI  Y  H L +E M 
Sbjct: 588 TGFACDVSLVNALISMYFNCGDINAGKFLF-EVMPWRSIVSWNALITGYRFHYLQNEVMA 646

Query: 638 IFDKMKLANLQPSQATFVSVMSAC 661
            F +M     +P+  T ++++ +C
Sbjct: 647 SFCQMIREGQKPNYVTLLNLLPSC 670



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 249/540 (46%), Gaps = 3/540 (0%)

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
           LG    A   F +I    V   N MI      G   + L V       G   D +TF   
Sbjct: 102 LGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFV 161

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           ++ C+ +    I   +H +++R+  E ++ I  AL+D Y K+  M  A  V ++++  D+
Sbjct: 162 IKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDL 221

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ++WN L  G+S N    +   +  +    G +PN  TF+ ++  C ++  LD+G  +   
Sbjct: 222 VTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGF 281

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  GF  +E +T +LI M+   G + +A  +FD+ + KN+  WN ++S Y  N   ++ 
Sbjct: 282 VVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEA 341

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
            K F  + ++ ++ N  TF  ++  C  S N      +H  ++K    S   + ++L+  
Sbjct: 342 FKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSM 401

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L+++        R ++ SW +M+S   H G    ++  F  +   G  PD   +
Sbjct: 402 YAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISI 461

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
             IL++C+ + A    K+ H F  +  F++ + +++A++  Y+ CG +  +   F Q   
Sbjct: 462 VNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLF-QKMP 520

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             + I +NTLI    H+G   +A+ +  KM+   ++    T +S++  C     + +G  
Sbjct: 521 LRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMT 580

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
           L      + G          L+ M    G +   K + E+MP++ S   + +L++G R H
Sbjct: 581 L-HGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWR-SIVSWNALITGYRFH 638



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 235/517 (45%), Gaps = 15/517 (2%)

Query: 32  NQFCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMY 89
           + FC   F   DP  I +   LS    L++ +LG   H    +  F +++ + N L+A Y
Sbjct: 444 DAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFY 503

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           S CG      ++F +M  RN +SW  ++S  + NG+    + +   M+      +   + 
Sbjct: 504 SDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLI 563

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S++ +C        G ++H +A+K     +  +  ++++ Y   GD+ A + +F  +   
Sbjct: 564 SIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWR 623

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            +  WNA+I GY       E +     M+ EG   +  T +N L  C  +     G+ IH
Sbjct: 624 SIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQ---GKSIH 680

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              +R+ V     I+ +LI MY +   ++    +FE    +D+  WN +   + + KN  
Sbjct: 681 AFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAK 740

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           ++ + F + + +   P+++TF  L+  C +L  L+L   +    +  GF     ++++LI
Sbjct: 741 ESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALI 800

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            +F RCG + +A  +F+ +S K+  +W+ +++GY  +      L     +  SG++ +G 
Sbjct: 801 DLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGI 860

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T+  V+  C           I  ++++ G        + ++      GQL+ +++F    
Sbjct: 861 TYASVLSACSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDF---V 917

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           E+L      +++ +L+          I H  V+ GEK
Sbjct: 918 EKLPCKPSVSLLESLL-------GACIIHGNVKLGEK 947



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 181/391 (46%), Gaps = 12/391 (3%)

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           + S P   +F  L   C  + +L     L  + +    + +E V +  I      GA E+
Sbjct: 51  NSSNPKVTSFLRLFDLCRNIENLK---PLGSVLIVRDLMRDEYVVAEFIISCFHLGAPEL 107

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A S F+ +   ++   N ++   C +    DVL  +      G   +  TF +V++ C  
Sbjct: 108 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTA 167

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                +   +H  +++T F     I ++L+  Y   G++  +    +   + D+ +W A+
Sbjct: 168 LGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNAL 227

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G + E   +   + E G KP+     +I+  C  +      KSIH FV+K GF
Sbjct: 228 ISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGF 287

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           +++ ++  A+I  YA  G++  AR  FD +   N V+++N++I AYA +   SEA ++F 
Sbjct: 288 SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKN-VVIWNSMISAYAQNQKSSEAFKMFQ 346

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDML 697
           +M  AN+QP+  TFVS++  C +      G    KS+ +   +Y +         L+ M 
Sbjct: 347 QMLKANMQPNVVTFVSIIPCCENSANFWYG----KSLHAHVMKYRLDSQLSVATALLSMY 402

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           ++ G L  A  +   MP + +   + S++SG
Sbjct: 403 AKLGDLNSADFIFYQMP-RRNLLSWNSMISG 432


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 232/718 (32%), Positives = 385/718 (53%), Gaps = 7/718 (0%)

Query: 47  LAKSLSL-SENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           L K L L S N+ +     ++H HIV LGF  +D+FL N L+  YSK        ++FD 
Sbjct: 53  LGKLLQLPSPNILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDT 112

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           M  RNLV+W+ +VS   Q+G     L ++   M++    PNE+ + SV++ C  +G    
Sbjct: 113 MPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQ 172

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
              +H F +K    ++ +VG S+++FYAK G V  A  +F  +       W A+I GYA 
Sbjct: 173 ALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAK 232

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G    +L + + M    +  D+Y   + L  CS++   + G+QIHG ++R   +  +S+
Sbjct: 233 LGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSV 292

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           VN +ID Y+K   +    K+F R+ DKDV+SW T+  G  +N   G    LF + +  G 
Sbjct: 293 VNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGW 352

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           +P+    + +L  CG L  L  G Q+   A+     +++ V + LI M+ +C ++  A  
Sbjct: 353 KPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARK 412

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD V+  N+ ++N ++ GY       + L  F  +  S       TF  ++        
Sbjct: 413 VFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFL 472

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            ++  QIH  IIK G S   +  S+LI  Y     + D    F    +R D+  W AM S
Sbjct: 473 LELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDR-DIVVWNAMFS 531

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
               Q  N E++ ++  L  +  KP+E+    ++ + + I + +  +  H  VIK+G + 
Sbjct: 532 GYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDD 591

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           + +V ++++D YAKCG I+ +  AF  S N  D+  +N++I  YA HG  ++A+E+F++M
Sbjct: 592 DPFVTNSLVDMYAKCGSIEESHKAF-SSTNQRDIACWNSMISTYAQHGDAAKALEVFERM 650

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
            +  ++P+  TFV ++SACSH GL+D G   F+SM S++G++P  D Y C+V +L R G 
Sbjct: 651 IMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYACMVSLLGRAGK 709

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + +AK  ++ MP +P+  V+RSLLS CR+ G+ ELG +A+E  +   P +  +++LLS
Sbjct: 710 IYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLS 767


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 376/694 (54%), Gaps = 7/694 (1%)

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            +I  Y   G       +F EM   ++V+W +++S   + G   + ++ +++M+ +    
Sbjct: 266 TVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKS 325

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
               +GSV+     +   + G  +H  A+K+ +  N +VG S+++ Y+K   + AA +VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            ++   +   WNAMI GYAH G   + + +   M   G  +D +TF + L  C++  D +
Sbjct: 386 EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLE 445

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G Q H +II+ ++  ++ + NAL+DMY K   ++ A ++FE M D+D +SWNT+ GG+ 
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +++N  +   LF +    G   +    +  L+ C  +  L  G Q+ CL++ CG     +
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLH 565

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             SSLI M+ +CG +E A  VF ++   ++ + N L++GY  N  +  V+  F  +   G
Sbjct: 566 TGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTKG 624

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNS 502
           V  +  TF  +VE C + E+  +  Q HG IIK GFSS G Y+  SL+  Y+N  ++  +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEA 684

Query: 503 FE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
              FS  +    +  W  MMS     G   EA+  +  +   G  PD+    T+L  C+ 
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSV 744

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + + +  ++IH  +  L  + +   ++ +ID YAKCGD+K +   FD+    ++V+ +N+
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNS 804

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           LI  YA +G   +A++IFD M+ +++ P + TF+ V++ACSH G V  G  +F+ M  QY
Sbjct: 805 LINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY 864

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           G++   D   C+VD+L R GYL++A   IE    +P   ++ SLL  CRIHG+   GE A
Sbjct: 865 GIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIA 924

Query: 742 SEKLLLLLPKNDAAHVLLS----KRKRQREGNLL 771
           +E+L+ L P+N +A+VLLS     + R  E N L
Sbjct: 925 AERLIELEPQNSSAYVLLSNIYASQGRWEEANAL 958



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 164/631 (25%), Positives = 301/631 (47%), Gaps = 9/631 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VH   +KLG  ++I++ ++L++MYSKC       +VF+ + ERN V W  ++    
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYA 404

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NGE    +++++DMK++G+  ++F   S++  C      E G   H   +K ++ KN F
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLF 464

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ YAK G +  A ++F  +   D   WN +IGGY       EA ++   M   G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCG 524

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D     + L+ C+ V     G+Q+H L ++  ++  +   ++LIDMY K   ++ A 
Sbjct: 525 IVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDAR 584

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF  M +  V+S N L  G+S+N N  +   LF + +  G  P+ +TF+ ++  C K  
Sbjct: 585 KVFSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPE 643

Query: 362 DLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
            L LG Q     +  GF  E E +  SL+ ++     +  A ++F  +S  K+I  W  +
Sbjct: 644 SLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGM 703

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SG+  N    + LK +  +   G   +  TF  V+  C    + +    IH  I     
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                  ++LI  Y   G + +S + F     R ++ SW ++++     G+  +A+ IF 
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKC 597
           S+ ++   PDE     +L +C+  G     + I   +I + G    V   + ++D   + 
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVS 656
           G ++ A    +      D  ++++L+ A   HG   +        +L  L+P  ++ +V 
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHG--DDMRGEIAAERLIELEPQNSSAYVL 941

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           + +  + +G  ++   L K+M  + G++  P
Sbjct: 942 LSNIYASQGRWEEANALRKAMRDR-GVKKVP 971



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 165/742 (22%), Positives = 320/742 (43%), Gaps = 70/742 (9%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VH   + LG  ++  L N ++ +Y+KC    +  + F+ + E+++ +W  ++S   
Sbjct: 78  IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYS 136

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+    L+ +V +  N   PN+F    V+         EFG  IHC  +K+ +E+N +
Sbjct: 137 SIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSY 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G ++++ YAK   +  A+RVF  I   +  CW  +  GY   G   EA+ V   M  EG
Sbjct: 197 CGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEG 256

Query: 242 ITMDKYTFINAL------------------------------------QGCSLVA----- 260
              D   F+  +                                    +GC +VA     
Sbjct: 257 HRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFL 316

Query: 261 -------------------------DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                                    + D+G  +H   I+  +  +I + ++L+ MY K  
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            M+ A KVFE + +++ + WN +  G++ N    +   LF     SG   +  TF+ LL 
Sbjct: 377 KMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    DL++G Q   + +         V ++L+ M+ +CGA+E A  +F+++  ++  +
Sbjct: 437 TCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVS 496

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ GY  +  +++    F  +   G+  +G      ++ C          Q+H   +
Sbjct: 497 WNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSV 556

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G     +  SSLI  Y   G ++++ +  +      + S  A+++    Q +  EAV 
Sbjct: 557 KCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGY-SQNNLEEAVV 615

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVASAVIDAY 594
           +F  ++  G  P E    TI+ +C    +       H  +IK GF++E  Y+  +++  Y
Sbjct: 616 LFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLY 675

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
                +  A   F +  +   ++++  ++  ++ +G   EA++ + +M+     P QATF
Sbjct: 676 MNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATF 735

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           V+V+  CS    + +G  +  S+               L+DM ++ G ++ +  V + M 
Sbjct: 736 VTVLRVCSVLSSLREGRAI-HSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMR 794

Query: 715 FQPSPTVYRSLLSGCRIHGNKE 736
            + +   + SL++G   +G  E
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAE 816



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/588 (24%), Positives = 261/588 (44%), Gaps = 57/588 (9%)

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           K++   K    MP+  A+           A   G ++H  +L + I+    +G ++++ Y
Sbjct: 57  KLFKSRKVFDEMPHRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK   V+ AE+ F S+  D V  WN+M+  Y+  G   + L    S+    I  +K+TF 
Sbjct: 106 AKCAQVSYAEKQFNSLEKD-VTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFS 164

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             L   +   + + GRQIH  +I+  +E +     AL+DMY K   +  A +VF+ + D 
Sbjct: 165 IVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDP 224

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           + + W  LF G+ +   P +   +F +    G RP+H+ F                    
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAF-------------------- 264

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
                           ++I  +   G ++ A  +F  +   ++  WN ++SG+    C+ 
Sbjct: 265 ---------------VTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEI 309

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             ++ F N+ +S V+    T   V+       N  +   +H   IK G +S  Y+ SSL+
Sbjct: 310 VAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y    +++ + +     E  +   W AM+    H G +H+ + +F  +  +G   D++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              ++L++CA     +     H  +IK      ++V +A++D YAKCG ++ AR  F+  
Sbjct: 430 TFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM 489

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            + ++V  +NT+I  Y      SEA ++F +M    +    A   S + AC++   + +G
Sbjct: 490 CDRDNV-SWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQG 548

Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
               CL  K      G+         L+DM S+ G +EDA+ V   MP
Sbjct: 549 KQVHCLSVKC-----GLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 152/322 (47%), Gaps = 7/322 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA +L    N+     G QVH   VK G    +   ++LI MYSKCG      +VF  M 
Sbjct: 532 LASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E ++VS   +++   QN   +  + ++ +M T G  P+E    ++++ C    +   G  
Sbjct: 592 EWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQ 650

Query: 167 IHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHC 224
            H   +K     +  ++G S+L  Y     +A A  +F  +SS   +  W  M+ G++  
Sbjct: 651 FHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQN 710

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  EAL     M  +G   D+ TF+  L+ CS+++    GR IH LI     +      
Sbjct: 711 GFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770

Query: 285 NALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           N LIDMY K   M  + +VF+ M  + +V+SWN+L  G+++N        +F     S  
Sbjct: 771 NTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830

Query: 344 RPNHVTFSILLRQC---GKLLD 362
            P+ +TF  +L  C   GK+ D
Sbjct: 831 MPDEITFLGVLTACSHAGKVSD 852


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 219/696 (31%), Positives = 373/696 (53%), Gaps = 3/696 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I+  G  +D FL N LI + SK         VFD+M  +NL++W+ +VS   Q G 
Sbjct: 49  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 108

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            +  L ++VD+ + +G  PNEF + SV++ C  +G  E G  +H F ++   +++ +VG 
Sbjct: 109 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 168

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++FY+K G++  A  VF  +S      W  +I GY  CG    +L + + M    +  
Sbjct: 169 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 228

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+Y   + L  CS++   + G+QIH  ++R   E  +S+VN LID Y K + +    K+F
Sbjct: 229 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 288

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M  K++ISW T+  G+ +N    +   LF +    G +P+    + +L  CG    L+
Sbjct: 289 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 348

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+    +      +E V + LI M+ +   +  A  VFD ++ +N+ ++N ++ GY 
Sbjct: 349 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 408

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                ++ L+ F  +       +  TF  ++         ++  QIHG IIK G S   +
Sbjct: 409 SQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLF 468

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             S+LI  Y     + ++          D+  W AM         N EA+ ++ +L  + 
Sbjct: 469 AGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSR 528

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           +KP+E+    ++ + + + + +  +  H  ++K+G +   +V +A++D YAKCG I+ AR
Sbjct: 529 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 588

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+ S    DV+ +N++I  +A HG   EA+ +F +M    +QP+  TFV+V+SACSH 
Sbjct: 589 KMFNSSI-WRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 647

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           G V+ G   F SM   +G++P  + Y C+V +L R+G L +AK  IE MP +P+  V+RS
Sbjct: 648 GRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRS 706

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS CRI GN ELG++A+E  +   PK+  +++LLS
Sbjct: 707 LLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 742



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 277/567 (48%), Gaps = 8/567 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG +V+ GF  D+++  +LI  YSK G       VFD+++E+  V+WT I++   +
Sbjct: 148 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 207

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G   + L+++  M+    +P+ + V SV+  C  +   E G  IH + L+   E +  V
Sbjct: 208 CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 267

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++FY K   V A  ++F  +   ++  W  MI GY    + +EA+ +   M   G 
Sbjct: 268 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 327

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +   + L  C      + GRQ+H   I++ +E    + N LIDMY KS+ +  A K
Sbjct: 328 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKK 387

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ MA+++VIS+N +  G+S  +   +   LFH+  +    P+ +TF  LL     L  
Sbjct: 388 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFA 447

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+L  Q+  L +  G   +    S+LI ++ +C  V+ A  VF+ ++ K+I  WN +  G
Sbjct: 448 LELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFG 507

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +  + + LK +  +  S  + N  TF  ++       + +   Q H  ++K G   C
Sbjct: 508 YTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 567

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ ++L+  Y   G ++ + +  N +   D+  W +M+S     G   EA+ +F  +++
Sbjct: 568 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 627

Query: 543 AGEKPDEYILGTILNSCAAIGAYQ----RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            G +P+      +L++C+  G  +       S+  F IK G  TE Y  + V+    + G
Sbjct: 628 EGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPG--TEHY--ACVVSLLGRSG 683

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMA 625
            +  A+   ++       IV+ +L+ A
Sbjct: 684 KLFEAKEFIEKMPIEPAAIVWRSLLSA 710



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 112/207 (54%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +S +L +  L  Q+HG I+K G + D+F  + LI +YSKC Y      VF+EM E+++
Sbjct: 439 LGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDI 498

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W  +     Q+ E +  LK+Y  ++ +   PNEF   +++    ++ +   G   H  
Sbjct: 499 VVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQ 558

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K+ ++  PFV  ++++ YAK G +  A ++F S    DV CWN+MI  +A  G   EA
Sbjct: 559 LVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEA 618

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCS 257
           L +   M+ EGI  +  TF+  L  CS
Sbjct: 619 LGMFREMMKEGIQPNYVTFVAVLSACS 645



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)

Query: 34  FCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           + +  F R+ P     A  ++ + NL S   G Q H  +VK+G     F+ N L+ MY+K
Sbjct: 521 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 580

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      ++F+    R++V W  ++S   Q+GE +  L M+ +M   G  PN     +V
Sbjct: 581 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 640

Query: 152 MKVCVSMGASEFG 164
           +  C   G  E G
Sbjct: 641 LSACSHAGRVEDG 653


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/699 (30%), Positives = 364/699 (52%), Gaps = 3/699 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG ++K G   D  L N+L+ +Y+KCG   +  +VF E+ ER++VSWT +++  + 
Sbjct: 147 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA 206

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     + ++ +M+  G   NEF   + +K C      EFG  +H  A+K+    + FV
Sbjct: 207 EGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFV 266

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ YAK G++  AERVF  +   +   WNA++ G+A  G   + LN+   M    I
Sbjct: 267 GSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEI 326

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              K+T    L+GC+   +   G+ +H L IR   E    I   L+DMY K      A K
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF R+ D DV+SW+ +     +     + A +F +   SG  PN  T + L+     L D
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGD 446

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +       GF  +  V ++L+ M+ + G+V+    VF+  + +++ +WN LLSG
Sbjct: 447 LYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSG 506

Query: 423 YCFN-CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           +  N  CD   L+ F  +   G   N  TF  ++ +C    +  +  Q+H  I+K     
Sbjct: 507 FHDNETCDTG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 565

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ ++L+  Y     L+++    N   + D+ +W  +++     G   +AV  F  + 
Sbjct: 566 NDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 625

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G KP+E+ L + L+ C+ I      + +H   IK G + +++VASA++D YAKCG ++
Sbjct: 626 REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVE 685

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A + FD    S D + +NT+I  Y+ HG   +A++ F+ M      P + TF+ V+SAC
Sbjct: 686 DAEVVFD-GLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSAC 744

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GL+++G   F S+   YG+ P+ + Y C+VD+L R G   + +  IE M    +  +
Sbjct: 745 SHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLI 804

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + ++L  C++HGN E GE A+ KL  L P+ D+ ++LLS
Sbjct: 805 WETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLS 843



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 277/584 (47%), Gaps = 3/584 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C S G    G +IH   +K  I  +  +  S++N YAK G    A +VF  I   D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A+I G+   GYG  A+N+   M  EG+  +++T+  AL+ CS+  D + G+Q+H 
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I+      + + +AL+D+Y K   M  A +VF  M  ++ +SWN L  GF++  +  +
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +LF +   S    +  T S +L+ C    +L  G  +  LA+  G   +E ++  L+ 
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG    A  VF  +   ++ +W+ +++         +  + F  +  SGV  N  T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              +V       +      IH  + K GF     +C++L+  Y+  G + +         
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW A++S           + IF+ ++  G  P+ Y   +IL SC+++      K 
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  ++K   +   +V +A++D YAK   ++ A   F++     D+  +  ++  YA  G
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIK-RDLFAWTVIVAGYAQDG 612

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +A++ F +M+   ++P++ T  S +S CS    +D G  L  SM  + G        
Sbjct: 613 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL-HSMAIKAGQSGDMFVA 671

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             LVDM ++ G +EDA+ V + +  + + + + +++ G   HG 
Sbjct: 672 SALVDMYAKCGCVEDAEVVFDGLVSRDTVS-WNTIICGYSQHGQ 714



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 166/314 (52%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  +S + +L     G  +H  + K GF  D  + N L+ MY K G    G RVF+   
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+L+SW  ++S    N   D GL+++  M   GF PN +   S+++ C S+   + G  
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K  ++ N FVG ++++ YAK   +  AE +F  +   D+  W  ++ GYA  G 
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 613

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G +A+     M  EG+  +++T  ++L GCS +A  D GRQ+H + I++     + + +A
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASA 673

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY K   ++ A  VF+ +  +D +SWNT+  G+S++   G+    F   +  G+ P+
Sbjct: 674 LVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 733

Query: 347 HVTFSILLRQCGKL 360
            VTF  +L  C  +
Sbjct: 734 EVTFIGVLSACSHM 747



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 173/378 (45%), Gaps = 9/378 (2%)

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +S +LR C    DL+ G  +    +  G   + ++ +SL+ ++ +CG+   A  VF  + 
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +W  L++G+      +  +  FC +   GVE N  T+   ++ C    + +   Q
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H   IK G  S  ++ S+L+  Y   G++  +        + +  SW A+++     G 
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             + + +F  +  +     ++ L T+L  CA  G  +  + +H   I++G   + +++  
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KCG + G  +         DV+ ++ +I      G   EA E+F +M+ + + P
Sbjct: 371 LVDMYSKCG-LAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIP 429

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +Q T  S++SA +  G +  G  +   +  +YG +        LV M  + G ++D   V
Sbjct: 430 NQFTLASLVSAATDLGDLYYGESIHACV-CKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488

Query: 710 IEIMPFQPSPTVYRSLLS 727
            E        T  R L+S
Sbjct: 489 FE-------ATTNRDLIS 499


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/696 (31%), Positives = 363/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   V  G      + N LI +YSK G      RVF+E++ R+ VSW  ++S   QNG
Sbjct: 63  EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L +Y  M   G +P  + + SV+  C        G  IH    K       FVG 
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +V+  Y + G    AERVF  +   D   +N +I G+A CG+G  AL +   M F G++ 
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ + D   G Q+H  + ++ +     +  +L+D+Y+K   ++ A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   F +  +  ++  LF +   +G RPN  T+  +LR C    ++D
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ + G +E A  V + +  K++ +W  +++GY 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            + C  D L  F  + + G+  +       +  C      +   QIH  I  +G+S    
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  +F      E  D  +   ++S     G + EA+ +F  + ++G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + L++ A +   ++ K IH  VIK G + E  V +A+I  Y KCG  + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA+++FD+MK   ++P+  TF+ V++ACSH 
Sbjct: 603 MEFSEMSERNEV-SWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   FKSM  +YG++P PD Y C++D+  R G L+ AK  IE MP      V+R+
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE+A++ LL L P + A++VLLS
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLS 757



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/620 (26%), Positives = 300/620 (48%), Gaps = 6/620 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     +    G  +H    K GF ++IF+ N +I +Y +CG F    RVF 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ V++  ++S   Q G  +  L+++ +M+ +G  P+   + S++  C S+G  + 
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K  I  +  +  S+L+ Y K GDV  A  +F S    +V  WN M+  +  
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +++T+   L+ C+   + D+G QIH L +++  E  + +
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   ++ A +V E + +KDV+SW ++  G+ +++      + F +    G 
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG +  A S
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ +  K+  T N L+SG+  +    + LK F  + +SGV+ N  TF   +        
Sbjct: 503 SFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG S    + ++LI  Y   G   D   EFS  +ER ++ SW  +++
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNTIIT 621

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFN 581
           +    G   EA+ +F  + + G KP++     +L +C+ +G  +   S       + G  
Sbjct: 622 SCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIR 681

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
                 + VID + + G +  A+   ++   + D +V+ TL+ A   H  + E  E F  
Sbjct: 682 PRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNI-EVGE-FAA 739

Query: 642 MKLANLQP-SQATFVSVMSA 660
             L  L+P   A++V + +A
Sbjct: 740 KHLLELEPHDSASYVLLSNA 759



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 204/440 (46%), Gaps = 7/440 (1%)

Query: 26  HRLCGNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           H  CG+ +   + F       L  D + ++  L+   +L     GTQ+H ++ K G ++D
Sbjct: 219 HAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSD 278

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
             ++ +L+ +Y KCG     L +F+     N+V W L++ A  Q  +     +++  M+ 
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  PN+F    +++ C      + G  IH  ++K   E + +V   +++ Y+K G +  
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RV   +   DV  W +MI GY       +AL     M   GI  D     +A+ GC+ 
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           +     G QIH  I  S     +SI NAL+++Y +   +  AF  FE M  KD I+ N L
Sbjct: 459 INAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGL 518

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             GF+++    +   +F +   SG + N  TF   L     L ++  G Q+    +  G 
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH 578

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             E  V ++LI ++ +CG+ E A   F  +S +N  +WN +++    +    + L  F  
Sbjct: 579 SFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQ 638

Query: 439 IWESGVEVNGCTFFYVVETC 458
           + + G++ N  TF  V+  C
Sbjct: 639 MKKEGIKPNDVTFIGVLAAC 658



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 14/293 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA ++S    + +   G Q+H  I   G++ D+ + N L+ +Y++CG        F
Sbjct: 445 DNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +EM  ++ ++   +VS   Q+G  +  LK+++ M  +G   N F   S +    ++   +
Sbjct: 505 EEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K        VG ++++ Y K G    A+  F  +S  +   WN +I   +
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRS 275
             G G EAL++   M  EGI  +  TFI  L  CS V   + G          +G+  R 
Sbjct: 625 QHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRP 684

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +    +      ID++ ++  +D A K  E M    D + W TL      +KN
Sbjct: 685 DHYACV------IDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKN 731



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)

Query: 556 LNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +C   G  +Q    IH   +  G      V + +ID Y+K G +  AR  F++  ++ 
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEE-LSAR 106

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +  ++  YA +GL  EA+ ++ +M  A + P+     SV+S+C+   L  +G L+ 
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIH 166

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            +   ++G          ++ +  R G    A+ V   MP + + T + +L+SG
Sbjct: 167 -AQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVT-FNTLISG 218


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/721 (29%), Positives = 389/721 (53%), Gaps = 11/721 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N +S   G  +H  I+K+GF  D+FL NNL+++Y KC       ++FDEM  R++ SWT+
Sbjct: 27  NSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTM 86

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++SA  + G  +  L+++  M  +G  PNEF + + ++ C ++     G        K  
Sbjct: 87  LMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSG 146

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + NP +G ++++FY+K G    A RVF  +++ D+  W  M+  +   G   +AL +  
Sbjct: 147 FDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYH 206

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+  G+  +++TF+  L   S +   + G+ +H  ++   +E ++ +  AL+DMY K  
Sbjct: 207 RMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQ 265

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A KV +   + DV  W  +  GF+++    +  + FH+   SG  PN+ T+S +L 
Sbjct: 266 SIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILN 325

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG-AVEMAHSVFDNVSYKNIT 414
            C  +L LDLG Q+    +  G  ++ +V +SL+ M+ +C   +E A   F  ++  N+ 
Sbjct: 326 ACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVI 385

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  L++G+  +  + + +K F  +   GV  N  T   ++  C   ++     ++HG I
Sbjct: 386 SWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYI 445

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           IK    +   + ++L+ +Y   G +D+++  ++  +  D+ ++ ++ + +   G++  A+
Sbjct: 446 IKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMAL 505

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            I   + +   + D + L + L++ A I   +  K +H + +K G  + + V++ ++D Y
Sbjct: 506 NIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLY 565

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            KCG I  A  +F +     D + +N LI   A +G VS A+  F+ M+LA ++P Q T 
Sbjct: 566 GKCGCIHDAHRSFLE-ITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITC 624

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + V+ ACSH GLVD G   F+SM  ++G++P  D Y CLVD+L R G LE+A +VIE MP
Sbjct: 625 LLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMP 684

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHE 774
           F+P   +Y++LL  C++HGN  LGE  + + L L P + A +VLL+        NL D  
Sbjct: 685 FKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLA--------NLYDDS 736

Query: 775 G 775
           G
Sbjct: 737 G 737


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/697 (30%), Positives = 381/697 (54%), Gaps = 3/697 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H H++K GF+ D  L+N+L+ +YSKC  FG+  ++ DE +E ++VSW+ ++S  +QNG
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L ++ +M   G   NEF   SV+K C        G  +H  A+    E + FV  
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  YAK G +  + R+F  I   +V  WNA+   Y       EA+ +   M+  GI  
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           ++++    L  C+ + + D+GR+IHGL+++  ++      NAL+DMY K+  ++ A  VF
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVF 241

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +A  DV+SWN +  G   +        L  +   SG+RPN  T S  L+ C  +   +
Sbjct: 242 QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG QL    +      +      L+ M+ +C  ++ A   +D++  K+I  WN L+SGY 
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361

Query: 425 FNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             C D  D +  F  ++   ++ N  T   V+++    +  ++  QIH   IK+G  S  
Sbjct: 362 -QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ +SL+ +Y     +D + +        D+ ++ +M++A    G   EA+ ++  + +A
Sbjct: 421 YVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDA 480

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             KPD +I  ++LN+CA + AY++ K +H   IK GF  +++ ++++++ YAKCG I+ A
Sbjct: 481 DIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDA 540

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AF +  N   ++ ++ +I  YA HG   EA+ +F++M    + P+  T VSV+ AC+H
Sbjct: 541 DRAFSEIPNRG-IVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNH 599

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F+ M+  +G++P+ + Y C++D+L R+G L +A  ++  +PF+    V+ 
Sbjct: 600 AGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWG 659

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL   RIH N ELG+ A++ L  L P+    HVLL+
Sbjct: 660 ALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLA 696



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 158/640 (24%), Positives = 300/640 (46%), Gaps = 8/640 (1%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           K+ S+  +L    +G +VHG  V  GF +D F+ N L+ MY+KCG      R+F  + ER
Sbjct: 90  KACSMKRDLN---MGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVER 146

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           N+VSW  + S  +Q+      + ++ +M  +G MPNEF++  ++  C  +   + G  IH
Sbjct: 147 NVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIH 206

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              LK+ ++ + F   ++++ Y+K G++  A  VF  I+  DV  WNA+I G        
Sbjct: 207 GLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCND 266

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            AL ++  M   G   + +T  +AL+ C+ +   ++GRQ+H  +I+ +    +     L+
Sbjct: 267 LALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLV 326

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K   MD A + ++ M  KD+I+WN L  G+S+  +     SLF K        N  
Sbjct: 327 DMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQT 386

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T S +L+    L  + +  Q+  +++  G   +  V +SL+  + +C  ++ A  +F+  
Sbjct: 387 TLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEER 446

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           +++++  +  +++ Y       + LK +  + ++ ++ +      ++  C      +   
Sbjct: 447 TWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGK 506

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q+H   IK GF    +  +SL+  Y   G ++++    +      + SW AM+      G
Sbjct: 507 QLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHG 566

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVA 587
           H  EA+ +F+ ++  G  P+   L ++L +C   G     K       +  G        
Sbjct: 567 HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY 626

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +ID   + G +  A    +      D  V+  L+ A   H  + E  +   KM L +L
Sbjct: 627 ACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNI-ELGQKAAKM-LFDL 684

Query: 648 QPSQA-TFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQP 685
           +P ++ T V + +  +  G+ +    + K M DS+   +P
Sbjct: 685 EPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEP 724



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 182/364 (50%), Gaps = 7/364 (1%)

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           ++L    +  GF  + ++ + L+ ++ +C     A  + D  S  ++ +W+ LLSGY  N
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + L  F  +   GV+ N  TF  V++ C    +  M  ++HG  + TGF S G++ 
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+  Y   G LD+S     G    ++ SW A+ S  V      EAV +F  +V +G  
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P+E+ +  ILN+CA +      + IH  ++K+G + + + A+A++D Y+K G+I+GA   
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F Q     DV+ +N +I     H     A+ + D+MK +  +P+  T  S + AC+  G 
Sbjct: 241 F-QDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGC--LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
            + G  L  S+     M    D +    LVDM S+   ++DA+   + MP +     + +
Sbjct: 300 KELGRQLHSSL---IKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAWNA 355

Query: 725 LLSG 728
           L+SG
Sbjct: 356 LISG 359



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 189/382 (49%), Gaps = 2/382 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R +   L+ +L     +  + LG Q+H  ++K+   +D+F    L+ MYSKC       R
Sbjct: 281 RPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARR 340

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            +D M ++++++W  ++S   Q G+    + ++  M +     N+  + +V+K   S+ A
Sbjct: 341 AYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQA 400

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +    IH  ++K  I  + +V  S+L+ Y K   +  A ++F   + +D+  + +MI  
Sbjct: 401 IKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITA 460

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y+  G G EAL +   M    I  D +   + L  C+ ++ ++ G+Q+H   I+    C 
Sbjct: 461 YSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCD 520

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I   N+L++MY K   ++ A + F  + ++ ++SW+ + GG++++ +  +   LF++ + 
Sbjct: 521 IFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR 580

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G  PNH+T   +L  C     ++ G Q  + + +  G    +   + +I +  R G + 
Sbjct: 581 DGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLN 640

Query: 400 MAHSVFDNVSYK-NITTWNELL 420
            A  + +++ ++ +   W  LL
Sbjct: 641 EAVELVNSIPFEADGFVWGALL 662



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 11/210 (5%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+ ++ DP   +  L+   NL +   G Q+H H +K GF  DIF  N+L+ MY+KCG   
Sbjct: 479 DADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIE 538

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC- 155
              R F E+  R +VSW+ ++    Q+G     L+++  M  +G  PN   + SV+  C 
Sbjct: 539 DADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACN 598

Query: 156 ----VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
               V+ G   F      F +K   E      C +++   + G +  A  +  SI  +  
Sbjct: 599 HAGLVNEGKQYFEKMEVMFGIKPTQEH---YAC-MIDLLGRSGKLNEAVELVNSIPFEAD 654

Query: 212 G-CWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           G  W A++G  A      E     + MLF+
Sbjct: 655 GFVWGALLGA-ARIHKNIELGQKAAKMLFD 683


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/701 (31%), Positives = 370/701 (52%), Gaps = 6/701 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H HI++ GF +D+ ++  L+ MY KCG       +FD+M ERN++SWT+++     
Sbjct: 49  GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAH 108

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G        ++ M+  GF+PN +   S++    S GA E+   +H  A+   +  +  V
Sbjct: 109 YGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRV 168

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ YAK G +  A  VF  +   D+  W  MIGG A  G G EA ++   M   G 
Sbjct: 169 GNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC 228

Query: 243 TMDKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
             +  T+++ L   ++ +    +  +++H    ++     + + NALI MY K   +D A
Sbjct: 229 LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDA 288

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M D+DVISWN + GG ++N    +  ++F K    G  P+  T+  LL      
Sbjct: 289 RLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVST 348

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              +   ++   A+  G + +  V S+ ++M+ RCG+++ A  +FD ++ +N+TTWN ++
Sbjct: 349 GAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMI 408

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G     C  + L  F  +   G   +  TF  ++      E  + V ++H   I  G  
Sbjct: 409 GGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV 468

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               + ++L+  Y   G    + + F +  ER ++ +W  M+S L   G  HEA ++F  
Sbjct: 469 DL-RVGNALVHMYAKCGNTMYAKQVFDDMVER-NVTTWTVMISGLAQHGCGHEAFSLFLQ 526

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++  G  PD     +IL++CA+ GA +  K +H   +  G  +++ V +A++  YAKCG 
Sbjct: 527 MLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGS 586

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR  FD      DV  +  +I   A HG   +A+++F KMKL   +P+  +FV+V+S
Sbjct: 587 VDDARRVFDDMLE-RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLS 645

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLVD+G   F S+   YG++P+ + Y C+VD+L R G LE+AKH I  MP +P  
Sbjct: 646 ACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGD 705

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             + +LL  C  +GN E+ E+A+++ L L PK+ + +VLLS
Sbjct: 706 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 746



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 156/624 (25%), Positives = 294/624 (47%), Gaps = 12/624 (1%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++    + G  +  +K+Y  M+  G  PNE    S++K C S  + ++G  IH   ++  
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + +  V  +++N Y K G +  A+ +F  +   +V  W  MIGG AH G G EA +   
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  EG   + YT+++ L   +     +  +++H   + + +   + + NAL+ MY KS 
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D A  VF+ M ++D+ SW  + GG +++    +  SLF +    G  PN  T+  +L 
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 356 QCG--KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
                    L+   ++   A   GF+ +  V ++LI+M+ +CG+++ A  VFD +  +++
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN ++ G   N C  +    F  + + G   +  T+  ++ T   +   + V ++H  
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            ++ G  S   + S+ +  Y+  G +D++    +     ++ +W AM+  +  Q    EA
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           +++F  +   G  PD      IL++     A +  K +H + I  G   ++ V +A++  
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG+   A+  FD     N V  +  +I   A HG   EA  +F +M    + P   T
Sbjct: 480 YAKCGNTMYAKQVFDDMVERN-VTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQ---YGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           +VS++SAC+  G ++      K + S     G+         LV M ++ G ++DA+ V 
Sbjct: 539 YVSILSACASTGALE----WVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVF 594

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGN 734
           + M  +     +  ++ G   HG 
Sbjct: 595 DDM-LERDVYSWTVMIGGLAQHGR 617


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/701 (30%), Positives = 376/701 (53%), Gaps = 5/701 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
             +V   + K+G   D      +I  Y   G       +F  M  RN+V+W L++S   +
Sbjct: 245 AVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAK 304

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     ++ + +M+  G       +GSV+    S+ A +FG  +H  ALK  +  N +V
Sbjct: 305 GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYV 364

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++ YAK G + AA++VF +++  +V  WNAM+GGY   GY  E + +  +M   G 
Sbjct: 365 GSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGF 424

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +T+ + L  C+ +   D+G Q+H +II+++   ++ + NAL+DMY KS  ++ A +
Sbjct: 425 YPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQ 484

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            FE + ++D +SWN +  G+ + ++  +   LF +  L G  P+ V+ + +L  C  +  
Sbjct: 485 QFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRG 544

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+ CL++  G   +    SSLI M+ +CGA++ AH +   +  +++ + N L++G
Sbjct: 545 LEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAG 604

Query: 423 YC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS- 480
           Y   N   A  +  F ++   G+     TF  +++ C   +   +  QIH  I+K G   
Sbjct: 605 YAQINLEQA--VNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQL 662

Query: 481 SCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
              ++  SL+  Y+N     D S  FS  +       W AM+S L     +  A+ ++  
Sbjct: 663 DDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKE 722

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +      PD+    + L +CA + + +     H  +   GF+++   +SA++D YAKCGD
Sbjct: 723 MRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGD 782

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +K +   F +     DVI +N++I+ +A +G   +A+ +FD+MK +++ P   TF+ V++
Sbjct: 783 VKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLT 842

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH G V +G L+F  M + YGMQP  D   C+VD+L R G L++A+  I  + F+P  
Sbjct: 843 ACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDA 902

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ ++L  CRIHG+   G+ A+EKL+ L P+N + +VLLS
Sbjct: 903 KVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLS 943



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 197/815 (24%), Positives = 348/815 (42%), Gaps = 87/815 (10%)

Query: 3   ILKRAFLFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIF---LAKSLSLSENLKS 59
           +L++ F     PS + H+   ++      N     S   K  I+   L   L  S+ +K+
Sbjct: 1   MLRKFFFLKTSPSSNLHSFHHQLTFSAIPNGSNHPSHTLKPRIYTHILQNCLQKSKQVKT 60

Query: 60  RVLGTQV--------------HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
             L  ++              H   +KLGF +   L N ++ +Y+KC    +  R F ++
Sbjct: 61  HSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQL 120

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            ++++++W  I+S   + G   + +K +  +  +G  PNEF    V+  C  +   + G 
Sbjct: 121 EDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGR 180

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            +HC  +K+  E   +   +++  YAK   +  A  +F      D   W +MIGGY   G
Sbjct: 181 QVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVG 240

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA+ V   M   G   D+  F                               ++++N
Sbjct: 241 LPEEAVKVFQEMEKVGQEPDQVAF-------------------------------VTVIN 269

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           A +D+      +D A  +F RM +++V++WN +  G ++     +    F     +G + 
Sbjct: 270 AYVDL----GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKS 325

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
              T   +L     L  LD GL +   AL  G      V SSL+ M+ +CG +E A  VF
Sbjct: 326 TRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVF 385

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D ++ +N+  WN +L GY  N    +V++ F N+   G   +  T+  ++  C   +   
Sbjct: 386 DTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLD 445

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
           +  Q+H  IIK  F+S  ++ ++L+  Y   G L+++ +        D  SW  ++   V
Sbjct: 446 LGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYV 505

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            +    EA  +F  +   G  PDE  L +IL++CA++   ++ K +H   +K G  T++Y
Sbjct: 506 QEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLY 565

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             S++ID YAKCG I  A            V+  N LI  YA   L  +A+ +F  M + 
Sbjct: 566 SGSSLIDMYAKCGAIDSAHKIL-ACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVE 623

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC-LVDMLSRNGYLE 704
            +  ++ TF S++ AC  +  ++ G  +  S+  + G+Q   +  G  L+ M   +    
Sbjct: 624 GINSTEITFASLLDACHEQQKLNLGRQI-HSLILKMGLQLDDEFLGVSLLGMYMNSLRTT 682

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
           DA  +        S  V+ +++SG                    L +ND + V L   K 
Sbjct: 683 DASVLFSEFSNPKSAVVWTAMISG--------------------LSQNDCSVVALQLYKE 722

Query: 765 QREGNLLDHEG-----------VCNVNDGIKTVDL 788
            R  N+L  +            V ++ DG +T  L
Sbjct: 723 MRSCNVLPDQATFVSALRACAVVSSIKDGTETHSL 757



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/653 (25%), Positives = 310/653 (47%), Gaps = 9/653 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   +L +   G  VH   +K G  +++++ ++L++MY+KCG      +VFD + 
Sbjct: 330 LGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN 389

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  ++   +QNG  +  ++++ +MK+ GF P++F   S++  C  +   + G+ 
Sbjct: 390 EQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQ 449

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   N FVG ++++ YAK G +  A + F  I + D   WN +I GY     
Sbjct: 450 LHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEED 509

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA ++   M   GI  D+ +  + L  C+ V   + G+Q+H L +++  E  +   ++
Sbjct: 510 EVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSS 569

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY K   +D A K+   M ++ V+S N L  G+++  N  Q  +LF   ++ G    
Sbjct: 570 LIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ-INLEQAVNLFRDMLVEGINST 628

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVF 405
            +TF+ LL  C +   L+LG Q+  L L  G  LD+E +  SL+ M+        A  +F
Sbjct: 629 EITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLF 688

Query: 406 DNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
              S  K+   W  ++SG   N C    L+ +  +    V  +  TF   +  C    + 
Sbjct: 689 SEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSI 748

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
           +   + H  I  TGF S     S+L+  Y   G + +S + F   + + D+ SW +M+  
Sbjct: 749 KDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVG 808

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G+  +A+ +F  + ++   PD+     +L +C+  G     + I   ++ L G   
Sbjct: 809 FAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQP 868

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                + ++D   + G +K A    ++     D  V+ T++ A   HG      +  +  
Sbjct: 869 RADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAE-- 926

Query: 643 KLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           KL  L+P  ++ +V + +  +  G  D+   L + M  + G++  P C   +V
Sbjct: 927 KLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREM-REKGVKKLPGCSWIVV 978



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/679 (24%), Positives = 307/679 (45%), Gaps = 46/679 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH ++VK+GF +  + +  LI MY+KC +      +FD   E + VSWT ++   I+
Sbjct: 179 GRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIK 238

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  +  +K++ +M+  G  P++ A                                 FV
Sbjct: 239 VGLPEEAVKVFQEMEKVGQEPDQVA---------------------------------FV 265

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +V+N Y  LG +  A  +F  + + +V  WN MI G+A  GYG EA+    +M   GI
Sbjct: 266 --TVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGI 323

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              + T  + L   + +A  D G  +H   ++  +  ++ + ++L+ MY K   M+ A K
Sbjct: 324 KSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKK 383

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ + +++V+ WN + GG+ +N    +   LF      G  P+  T+S +L  C  L  
Sbjct: 384 VFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKY 443

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           LDLG QL  + +   F     V ++L+ M+ + GA+E A   F+ +  ++  +WN ++ G
Sbjct: 444 LDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVG 503

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y     + +    F  +   G+  +  +   ++  C      +   Q+H   +KTG  + 
Sbjct: 504 YVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETK 563

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y  SSLI  Y   G +D++ +         + S  A+++    Q +  +AV +F  ++ 
Sbjct: 564 LYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLV 622

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIK 601
            G    E    ++L++C         + IH  ++K+G    + ++  +++  Y       
Sbjct: 623 EGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTT 682

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A + F +  N    +V+  +I   + +     A++++ +M+  N+ P QATFVS + AC
Sbjct: 683 DASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRAC 742

Query: 662 SHKGLVDKGC----LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +    +  G     L+F +     G          LVDM ++ G ++ +  V + M  + 
Sbjct: 743 AVVSSIKDGTETHSLIFHT-----GFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKK 797

Query: 718 SPTVYRSLLSGCRIHGNKE 736
               + S++ G   +G  E
Sbjct: 798 DVISWNSMIVGFAKNGYAE 816


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/695 (30%), Positives = 370/695 (53%), Gaps = 1/695 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +  G   D    N LI +Y+K G      RVF++++ R+ VSW  ++S   +NG 
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +  + +Y  M  +G +P  + + SV+  C      E G  +H    K        VG +
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  Y + G ++ AERVF  +   D   +N +I  +A CG G  AL +   M   G T D
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  + L  C+ + D + G+Q+H  ++++ +     I  +L+D+Y+K   +  A ++F+
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
                +V+ WN +   + +  +  ++  LF + + +G RPN  T+  LLR C    +++L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G Q+  L++  GF  +  V+  LI M+ + G ++ A  + + +  K++ +W  +++GY  
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           +    + L+TF ++   G+  +       +  C   +  +   QIH  +  +G+S+   I
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI 483

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y   G+   +F      E  D  +W  M+S     G   EA+ +F  + +AG 
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           K + +   + +++ A +   ++ K IH  VIK G  +E  VA+A+I  Y KCG I+ A+M
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKM 603

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F +    N V  +NT+I + + HG   EA+++FD+MK   L+P+  TF+ V++ACSH G
Sbjct: 604 QFFEMSERNHV-SWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 662

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV++G   FKSM S++G+ P PD Y C+VD+L R G L+ A+  +E MP   +  V+R+L
Sbjct: 663 LVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTL 722

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LS CR+H N E+GE A++ LL L P + A++VLLS
Sbjct: 723 LSACRVHKNIEIGELAAKYLLELEPHDSASYVLLS 757



 Score =  233 bits (595), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 288/593 (48%), Gaps = 21/593 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS          G  VH  + K G  ++  + N LIA+Y + G      RVF 
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           EM   + V++  ++S   Q G  +  L+++ +M+ +G+ P+   + S++  C S+G    
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + LK  +  +  +  S+L+ Y K G +  A  +F S    +V  WN M+  Y  
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++ ++   M+  G+  +++T+   L+ C+   + ++G QIH L I++  E  + +
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   +D A ++ E +  KDV+SW ++  G+ +++   +    F    L G 
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  G Q+       G+  + ++ ++L+ ++ RCG  + A S
Sbjct: 443 WPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F+ + +K+  TWN ++SG+  +    + L+ F  ++++GV+ N  TF   +       +
Sbjct: 503 LFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLAD 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG +S   + ++LI  Y   G + D   +F   +ER +  SW  +++
Sbjct: 563 IKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSER-NHVSWNTIIT 621

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG------AYQRTKS----IH 572
           +    G   EA+ +F  + + G KP++     +L +C+ +G       Y ++ S    IH
Sbjct: 622 SCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIH 681

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           P         + Y  + V+D   + G +  AR   ++   S + +V+ TL+ A
Sbjct: 682 P-------RPDHY--ACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSA 725



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 212/460 (46%), Gaps = 11/460 (2%)

Query: 9   LFADKPSCH---FHATRKRIHRLCGNNQFCSDSF-------LRKDPIFLAKSLSLSENLK 58
           +F++ P C    F+    R H  CGN +   + F          D + +A  L+   ++ 
Sbjct: 200 VFSEMPYCDRVTFNTLISR-HAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
               G Q+H +++K G + D  ++ +L+ +Y KCG     L +F      N+V W L++ 
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A  Q  +      ++  M   G  PNEF    +++ C   G    G  IH  ++K   E 
Sbjct: 319 AYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFES 378

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + +V   +++ Y+K G +  A R+   + + DV  W +MI GY    +  EAL     M 
Sbjct: 379 DMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQ 438

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             GI  D     +A+  C+ +     G+QIH  +  S     +SI NAL+++Y +     
Sbjct: 439 LFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSK 498

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            AF +FE +  KD I+WN +  GF+++    +   +F K   +G + N  TF   +    
Sbjct: 499 EAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASA 558

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L D+  G Q+    +  G   E  V ++LI ++ +CG++E A   F  +S +N  +WN 
Sbjct: 559 NLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNT 618

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +++    +    + L  F  + + G++ N  TF  V+  C
Sbjct: 619 IITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 658



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 145/319 (45%), Gaps = 15/319 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA ++S    +K+   G Q+H  +   G++ D+ + N L+ +Y++CG       +F
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLF 504

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + +  ++ ++W  +VS   Q+G ++  L++++ M   G   N F   S +    ++   +
Sbjct: 505 EAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIK 564

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K        V  ++++ Y K G +  A+  F+ +S  +   WN +I   +
Sbjct: 565 QGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCS 624

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRS 275
             G+G EAL++   M  EG+  +  TFI  L  CS V   + G          HG+  R 
Sbjct: 625 QHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRP 684

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASL 334
           +    +      +D+  ++  +D A K  E M    + + W TL      +KN  +   L
Sbjct: 685 DHYACV------VDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNI-EIGEL 737

Query: 335 FHKFILSGSRPNHVTFSIL 353
             K++L     +  ++ +L
Sbjct: 738 AAKYLLELEPHDSASYVLL 756



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 4/255 (1%)

Query: 459 CRS--ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           CR   ++  +V  IH   I  G        + LI  Y   G +  +          D  S
Sbjct: 51  CRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVS 110

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W AM+S     G   EAV ++H +  +G  P  Y+L ++L++C     +++ + +H  V 
Sbjct: 111 WVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVY 170

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K G  +E  V +A+I  Y + G +  A   F +     D + +NTLI  +A  G    A+
Sbjct: 171 KQGSCSETVVGNALIALYLRFGSLSLAERVFSE-MPYCDRVTFNTLISRHAQCGNGESAL 229

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           EIF++M+L+   P   T  S+++AC+  G ++KG  L   +  + GM P     G L+D+
Sbjct: 230 EIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYL-LKAGMSPDYIIEGSLLDL 288

Query: 697 LSRNGYLEDAKHVIE 711
             + G + +A  + +
Sbjct: 289 YVKCGVIVEALEIFK 303


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 232/736 (31%), Positives = 379/736 (51%), Gaps = 15/736 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+KLG  +D++L NNL+++Y+K         +FDEM  R++VSWT I+S+  +
Sbjct: 33  GICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTK 92

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  L+++  M  +G  PNEF + S ++ C ++G  E G  IHC A+K+ +E N FV
Sbjct: 93  TKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFV 152

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           G S++ FY K G  +       S+  D  DV  W  M+      G   EA  +   M+  
Sbjct: 153 GTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIES 212

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +++TF+  L   S       G+ +H  +I    E ++ +  A++DMY K   M  A
Sbjct: 213 GVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDA 272

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KV     + DV  W TL  GF++N    +  S+F    LSG  PN+ T+S LL     +
Sbjct: 273 IKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSI 332

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM-AHSVFDNVSYKNITTWNEL 419
           L LDLG Q     +  G  D+  + ++L+ M+ +C  +   A  VF  ++  N+  W  L
Sbjct: 333 LSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSL 392

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++G+     + D  + F  +  +GV  N  T   ++  C ++ +      +HG IIKT  
Sbjct: 393 IAGFAEKRLE-DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKV 451

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + ++L+ +Y   G +D ++         D  ++  + + L  +GH+  A+ +   
Sbjct: 452 DIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIH 511

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +   G K DE+ L + L++ A +G  +  K +H + +K GF     V+++++  Y+KCG 
Sbjct: 512 MCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGS 571

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A  AF +  +  D   +N LI  ++ +GL+S A+  FD M+LA ++P   T +S++S
Sbjct: 572 IHDANRAF-KDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLIS 630

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GL++ G   F SM  +Y + P  D Y CLVD+L R G LE+A  VIE M F+P  
Sbjct: 631 ACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDS 690

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNV 779
            + ++LL+ C +HGN  LGE  + + L L P + A ++LL+        NL D+ G+ + 
Sbjct: 691 LICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLA--------NLYDNAGLSDF 742

Query: 780 NDGIKTVDLKLELKLE 795
             G KT  L  E  L 
Sbjct: 743 --GEKTRRLMRERGLR 756



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 183/386 (47%), Gaps = 17/386 (4%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW-GLRVFDEMAERN 109
           L+ S ++ S  LG Q H  ++ +G  +D+++ N L+ MY KC +     ++VF E+   N
Sbjct: 326 LNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPN 385

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           ++ WT ++ A       +   +++ +M+  G  PN F + +++  C    +      +H 
Sbjct: 386 VMCWTSLI-AGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHG 444

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +K +++ +  V  ++++ YA +G +  A  V  +++  D   +  +       G+   
Sbjct: 445 HIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGM 504

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL V+  M  +GI MD+++  + L   + +   + G+Q+H   ++S  +   S+ N+L+ 
Sbjct: 505 ALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVH 564

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           +Y K   +  A + F+ +++ D  SWN L  GFS N       S F    L+G +P+ +T
Sbjct: 565 LYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSIT 624

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHS 403
              L+  C     L+LGL+      H     E ++T  L +  C      R G +E A  
Sbjct: 625 LLSLISACSHGGLLELGLEY----FH-SMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMG 679

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCD 429
           V + +S+K     + L+     N C+
Sbjct: 680 VIEKMSFKP----DSLICKTLLNACN 701



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 124/272 (45%), Gaps = 1/272 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +   ++  L      +S V    +HGHI+K     DI + N L+  Y+  G      
Sbjct: 416 VRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAW 475

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            V   M  R+ +++T + +   Q G   M LK+ + M  +G   +EF++ S +     +G
Sbjct: 476 SVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLG 535

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  +HC+++K   ++   V  S+++ Y+K G +  A R F  IS  D   WN +I 
Sbjct: 536 TMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLIS 595

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVE 278
           G++  G    AL+    M   G+  D  T ++ +  CS     ++G +  H +     + 
Sbjct: 596 GFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHIT 655

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             +     L+D+  +   ++ A  V E+M+ K
Sbjct: 656 PKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFK 687


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/713 (30%), Positives = 377/713 (52%), Gaps = 1/713 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           +K LS     KS   G Q+H HI K G ++D  ++N+LI +YSKC  FG+  ++ DE +E
Sbjct: 60  SKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE 119

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            +LVSW+ ++S   QNG     L  + +M   G   NEF   SV+K C  +     G  +
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   +    E + FV  +++  YAK  +   ++R+F  I   +V  WNA+   Y    + 
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFC 239

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            EA+ +   M+  GI  ++++  + +  C+ + D   G+ IHG +I+   +      NAL
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   +  A  VFE++   D++SWN +  G   +++  Q   L  +   SG  PN 
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNI 359

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T S  L+ C  +   +LG QL    +      +  V+  L+ M+ +C  +E A   F+ 
Sbjct: 360 FTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 419

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  K++  WN ++SGY     D + L  F  + + G+  N  T   ++++    +   + 
Sbjct: 420 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 479

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            Q+HG  +K+GF S  Y+ +SLI SY     ++++          D+ S+ +M++A    
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 539

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   EA+ +F  + +   KPD ++  ++LN+CA + A+++ K +H  ++K GF  +++  
Sbjct: 540 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 599

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +++++ YAKCG I  A  AF +      ++ ++ +I   A HG   +A+++F++M    +
Sbjct: 600 NSLVNMYAKCGSIDDAGRAFSE-LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 658

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P+  T VSV+ AC+H GLV +  L F+SM+  +G +P  + Y C++D+L R G + +A 
Sbjct: 659 SPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV 718

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++  MPF+ + +V+ +LL   RIH + ELG  A+E L +L P+    HVLL+
Sbjct: 719 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLA 771



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 143/566 (25%), Positives = 285/566 (50%), Gaps = 2/566 (0%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           F P   +   ++  C +  +   G  IH    K  +  +P +   ++N Y+K  +   A 
Sbjct: 52  FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           ++    S  D+  W+A+I GYA  G G  AL     M   G+  +++TF + L+ CS+V 
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D  IG+Q+HG+++ S  E  + + N L+ MY K      + ++F+ + +++V+SWN LF 
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            + +    G+   LF++ +LSG +PN  + S ++  C  L D   G  +    +  G+  
Sbjct: 232 CYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +    ++L+ M+ + G +  A SVF+ +   +I +WN +++G   +      L+    + 
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK 351

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            SG+  N  T    ++ C     +++  Q+H +++K    S  ++   L+  Y     L+
Sbjct: 352 RSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 411

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++    N     D+ +W A++S       + EA+++F  + + G   ++  L TIL S A
Sbjct: 412 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 471

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +      + +H   +K GF++++YV +++ID+Y KC  ++ A   F++     D++ + 
Sbjct: 472 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC-TIGDLVSFT 530

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           ++I AYA +G   EA+++F +M+   L+P +    S+++AC++    ++G  L   +  +
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI-LK 589

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDA 706
           YG          LV+M ++ G ++DA
Sbjct: 590 YGFVLDIFAGNSLVNMYAKCGSIDDA 615



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 210/421 (49%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ +   L+  ++    L+    G  +HG+++KLG+  D F  N L+ MY+K G    
Sbjct: 252 SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD 311

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            + VF+++ + ++VSW  +++  + +   +  L++   MK +G  PN F + S +K C  
Sbjct: 312 AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAG 371

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           MG  E G  +H   +K+ +E + FV   +++ Y+K   +  A   F  +   D+  WNA+
Sbjct: 372 MGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAI 431

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY+      EAL++   M  EGI  ++ T    L+  + +    + RQ+HGL ++S  
Sbjct: 432 ISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF 491

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              I +VN+LID Y K S ++ A ++FE     D++S+ ++   +++     +   LF +
Sbjct: 492 HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLE 551

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                 +P+    S LL  C  L   + G QL    L  GF+ +    +SL+ M+ +CG+
Sbjct: 552 MQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGS 611

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A   F  ++ + I +W+ ++ G   +      L+ F  + + GV  N  T   V+  
Sbjct: 612 IDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 671

Query: 458 C 458
           C
Sbjct: 672 C 672



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 209/406 (51%), Gaps = 8/406 (1%)

Query: 325 NKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +++P  TA L    I  G+  P  V++S LL QC     L  GLQ+       G  D+ +
Sbjct: 35  SQDPQTTAIL--NLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPS 92

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           + + LI ++ +C     A  + D  S  ++ +W+ L+SGY  N      L  F  +   G
Sbjct: 93  IRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLG 152

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ-LDNS 502
           V+ N  TF  V++ C   ++ ++  Q+HG ++ +GF    ++ ++L+  Y    + LD+ 
Sbjct: 153 VKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSK 212

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
             F    ER ++ SW A+ S  V      EAV +F+ +V +G KP+E+ L +++N+C  +
Sbjct: 213 RLFDEIPER-NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
               R K IH ++IKLG++ + + A+A++D YAK GD+  A   F++     D++ +N +
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEK-IKQPDIVSWNAV 330

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I     H    +A+E+  +MK + + P+  T  S + AC+  GL + G  L  S+  +  
Sbjct: 331 IAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSL-MKMD 389

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           M+        LVDM S+   LEDA+    ++P +     + +++SG
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG 434



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L+ D    +  L+   NL +   G Q+H HI+K GF  DIF  N+L+ MY+KCG   
Sbjct: 554 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 613

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R F E+ ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C 
Sbjct: 614 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN 673

Query: 157 SMG 159
             G
Sbjct: 674 HAG 676


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/698 (28%), Positives = 367/698 (52%), Gaps = 2/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H HI       DIF+ N LI+MY+KCG      ++FDEM ++++ SW L++   +Q
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +  ++   +++  M  +G  P+++    ++  C      + G  +    L    + + FV
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N + K G V  A +VF ++   D+  W +MI G A      +A N+   M  EG+
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK  F++ L+ C+     + G+++H  +    ++  I +  AL+ MY K   M+ A +
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  +  ++V+SW  +  GF+++    +    F+K I SG  PN VTF  +L  C +   
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSA 422

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q+    +  G++ ++ V ++L+ M+ +CG++  A +VF+ +S +N+  WN +++ 
Sbjct: 423 LKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITA 482

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + + TF  + + G++ +  TF  ++  C   +  ++   +   II+ GF S 
Sbjct: 483 YVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESD 542

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +I ++L+  +VN G L ++    N     D+ SW  +++  V  G N  A   F  + E
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQE 602

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +G KPD+     +LN+CA+  A    + +H  + +   + +V V + +I  Y KCG I  
Sbjct: 603 SGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDD 662

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A + F  +    +V  + ++I  YA HG   EA+E+F +M+   ++P   TFV  +SAC+
Sbjct: 663 AHLVF-HNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACA 721

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+ +G   F+SM   + ++P  + YGC+VD+  R G L +A   I  M  +P   ++
Sbjct: 722 HAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLW 780

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  C++H + EL E  ++K L L P +D  +V+LS
Sbjct: 781 GALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILS 818



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 297/585 (50%), Gaps = 3/585 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S++++C+       G  IH      +I+ + F+   +++ YAK G+  +A+++F  +   
Sbjct: 109 SLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDK 168

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           DV  WN ++GGY       EA  +   M+ +G+  DKYTF+  L  C+   + D G ++ 
Sbjct: 169 DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF 228

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            LI+ +  +  + +  ALI+M+IK  G+D A KVF  +  +D+I+W ++  G + ++   
Sbjct: 229 SLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFK 288

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           Q  +LF      G +P+ V F  LL+ C     L+ G ++       G   E  V ++L+
Sbjct: 289 QACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALL 348

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG++E A  VF+ V  +N+ +W  +++G+  +    +    F  + ESG+E N  
Sbjct: 349 SMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRV 408

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++  C R    +   QIH  IIK G+ +   + ++L+  Y   G L ++       
Sbjct: 409 TFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERI 468

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
            + ++ +W AM++A V       AV  F +L++ G KPD     +ILN C +  A +  K
Sbjct: 469 SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGK 528

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +   +I+ GF +++++ +A++  +  CGD+  A   F+      D++ +NT+I  +  H
Sbjct: 529 WVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFN-DMPERDLVSWNTIIAGFVQH 587

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G    A + F  M+ + ++P Q TF  +++AC+    + +G  L  ++ ++  +      
Sbjct: 588 GENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL-HALITEAALDCDVVV 646

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
              L+ M ++ G ++DA  V   +P + +   + S+++G   HG 
Sbjct: 647 GTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGR 690



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/528 (26%), Positives = 263/528 (49%), Gaps = 11/528 (2%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           NA +   +  G   EA+ V+ S+    I + + T+ + LQ C    +   G +IH  I  
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S+++  I + N LI MY K    + A ++F+ M DKDV SWN L GG+ +++   +   L
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
             + +  G +P+  TF  +L  C    ++D G +L  L L+ G+  +  V ++LI M  +
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW----ESGVEVNGCT 450
           CG V+ A  VF+N+  +++ TW  +++G   +       K  CN++    E GV+ +   
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARH----RQFKQACNLFQVMEEEGVQPDKVA 308

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  +++ C   E  +   ++H  + + G  +  Y+ ++L+  Y   G ++++ E  N  +
Sbjct: 309 FVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVK 368

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             ++ SW AM++     G   EA   F+ ++E+G +P+     +IL +C+   A ++ + 
Sbjct: 369 GRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQ 428

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           IH  +IK G+ T+  V +A++  YAKCG +  AR  F++  +  +V+ +N +I AY  H 
Sbjct: 429 IHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFER-ISKQNVVAWNAMITAYVQHE 487

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
               A+  F  +    ++P  +TF S+++ C     ++ G  + +S+  + G +      
Sbjct: 488 KYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV-QSLIIRAGFESDLHIR 546

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             LV M    G L  A ++   MP +     + ++++G   HG  +  
Sbjct: 547 NALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 244/540 (45%), Gaps = 34/540 (6%)

Query: 20  ATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDI 79
           A  ++  + C   Q   +  ++ D +     L    + ++   G +VH  + ++G   +I
Sbjct: 282 ARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEI 341

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           ++   L++MY+KCG     L VF+ +  RN+VSWT +++   Q+G  +     +  M  +
Sbjct: 342 YVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIES 401

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  PN     S++  C    A + G  IH   +K     +  V  ++L+ YAK G +  A
Sbjct: 402 GIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDA 461

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             VF  IS  +V  WNAMI  Y        A+    ++L EGI  D  TF + L  C   
Sbjct: 462 RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSP 521

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              ++G+ +  LIIR+  E  + I NAL+ M++    +  A  +F  M ++D++SWNT+ 
Sbjct: 522 DALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTII 581

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF ++         F     SG +P+ +TF+ LL  C     L  G +L  L       
Sbjct: 582 AGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALD 641

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V + LI M+ +CG+++ AH VF N+  KN+ +W  +++GY  +    + L+ FC +
Sbjct: 642 CDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQM 701

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            + GV+ +  TF   +  C            H  +IK G            +S  +F   
Sbjct: 702 QQEGVKPDWITFVGALSACA-----------HAGLIKEGLHH--------FESMKDF--- 739

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
                  N   R  M  +G M+      G  HEAV   + +     KPD  + G +L +C
Sbjct: 740 -------NIEPR--MEHYGCMVDLFGRAGLLHEAVEFINKM---QVKPDSRLWGALLGAC 787


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/696 (30%), Positives = 364/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  G      + N LI +Y+K G      +VFD +  ++ VSW  ++S   QNG
Sbjct: 133 QIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNG 192

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + ++ +M T G  P  +   SV+  C  +   + G  +H    K       +V  
Sbjct: 193 YEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCN 252

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y+++ +  +AE+VF  + S D   +N++I G A  G+   AL + + M  + +  
Sbjct: 253 ALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKP 312

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+       G Q+H  +I++ +   + +  AL+D+Y+  S +  A ++F
Sbjct: 313 DCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMF 372

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   F +  N  ++  +F +  + G  PN  T+  +LR C  +  LD
Sbjct: 373 LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALD 432

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +  GF     V S LI M+ + G ++ AH +   ++  ++ +W  L+SGY 
Sbjct: 433 LGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +   A+ LK F  +   G++ +   F   +  C   +      QIH     +G+S    
Sbjct: 493 QHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLS 552

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  ++      +  D  SW  ++S     G+  +A+ +F  +  A 
Sbjct: 553 IGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAK 612

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +   +  G+ +++ A I   ++ K IH  +IK GF++++ V++A+I  YAKCG I+ AR
Sbjct: 613 LEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDAR 672

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    NDV  +N +I  Y+ HG  +EA+ +F+KMK     P+  TFV V+SACSH 
Sbjct: 673 REFCEMPEKNDV-SWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHV 731

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV KG   F+SM  ++G+ P P  Y C+VD++SR G+L  A+  IE MP +P  T++R+
Sbjct: 732 GLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRT 791

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N E+GE+A++ LL L P++ A +VLLS
Sbjct: 792 LLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLS 827



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 186/684 (27%), Positives = 327/684 (47%), Gaps = 4/684 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L  N  S V   ++HG I+KLGF N+  L N L+ +Y   G     ++VF++M  R++
Sbjct: 17  LDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSV 76

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-EFGYSIHC 169
            SW  I+S  ++    +  L ++  M      P E +  SV++ C        +   IH 
Sbjct: 77  RSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHA 136

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +   +  +P +   ++  YAK G + +A +VF ++ + D   W AMI G++  GY  E
Sbjct: 137 RIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEE 196

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           A+++   M   GI    Y F + L GC+ +  FD+G Q+H L+ +        + NAL+ 
Sbjct: 197 AIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVT 256

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           +Y +      A KVF +M  KD +S+N+L  G ++         LF K      +P+ VT
Sbjct: 257 LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            + LL  C     L  G QL    +  G   +  V  +L+ ++  C  ++ AH +F    
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +N+  WN +L  +      ++  + F  +   G+  N  T+  ++ TC       +  Q
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH  +IKTGF    Y+CS LI  Y   G+LD +          D+ SW A++S       
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             EA+  F  ++  G + D     + +++CA I A  + + IH      G++ ++ + +A
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++  YA+CG IK A + F++  ++ D I +N LI  +A  G   +A+++F +M  A L+ 
Sbjct: 557 LVSLYARCGRIKEAYLEFEK-IDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEA 615

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           S  TF S +SA ++   + +G  +  +M  + G     +    L+   ++ G +EDA+  
Sbjct: 616 SFFTFGSAVSAAANIANIKQGKQI-HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARRE 674

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHG 733
              MP + +   + ++++G   HG
Sbjct: 675 FCEMP-EKNDVSWNAMITGYSQHG 697



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 307/626 (49%), Gaps = 8/626 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS    +K   +G Q+H  + K G + + ++ N L+ +YS+   F    +VF 
Sbjct: 213 PYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFS 272

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  ++ VS+  ++S   Q G  D  L+++  MK +   P+   V S++  C S GA   
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + +K  I  +  V  ++L+ Y    D+  A  +F +  +++V  WN M+  +  
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGK 392

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                E+  +   M  +G+  +++T+ + L+ C+ V   D+G QIH  +I++  + ++ +
Sbjct: 393 LDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYV 452

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A  +   + + DV+SW  L  G++++    +    F + +  G 
Sbjct: 453 CSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGI 512

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           + +++ FS  +  C  +  L+ G Q+   +   G+ ++ ++ ++L+ ++ RCG ++ A+ 
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYL 572

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ +  K+  +WN L+SG+  +    D LK F  +  + +E +  TF   V       N
Sbjct: 573 EFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIAN 632

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMS 522
            +   QIH  IIK GF S   + ++LI  Y   G ++++  EF    E+ D+ SW AM++
Sbjct: 633 IKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDV-SWNAMIT 691

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFN 581
                G+ +EAV +F  + + GE P+      +L++C+ +G   +       + K  G  
Sbjct: 692 GYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLV 751

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            +    + V+D  ++ G +  AR   ++     D  ++ TL+ A   H  V E  E F  
Sbjct: 752 PKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNV-EVGE-FAA 809

Query: 642 MKLANLQPS-QATFV--SVMSACSHK 664
             L  L+P   AT+V  S M A S K
Sbjct: 810 QHLLELEPEDSATYVLLSNMYAVSGK 835



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 269/580 (46%), Gaps = 6/580 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++ +C++ G+      +H   LK+       +   +++ Y  LGD+    +VF  + +  
Sbjct: 16  LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-LVADFDIGRQIH 269
           V  W+ +I G+         L++ S M+ E ++  + +F + L+ CS          QIH
Sbjct: 76  VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIH 135

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             II   + CS  I N LI +Y K+  +  A KVF+ +  KD +SW  +  GFS+N    
Sbjct: 136 ARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEE 195

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF +   +G  P    FS +L  C K+   D+G QL  L    G   E  V ++L+
Sbjct: 196 EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALV 255

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ R      A  VF  +  K+  ++N L+SG          L+ F  +    ++ +  
Sbjct: 256 TLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCV 315

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   ++  C  +       Q+H  +IK G SS   +  +L+  YVN   +  + E    A
Sbjct: 316 TVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTA 375

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           +  ++  W  M+ A     +  E+  IF  +   G  P+++   +IL +C ++GA    +
Sbjct: 376 QTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGE 435

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH  VIK GF   VYV S +ID YAK G +  A +   ++   +DV+ +  LI  YA H
Sbjct: 436 QIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL-RTLTEDDVVSWTALISGYAQH 494

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF-KSMDSQYGMQPSPD 688
            L +EA++ F +M    +Q     F S +SAC+    +++G  +  +S  S Y    S  
Sbjct: 495 NLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIG 554

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
               LV + +R G +++A    E +  + S + +  L+SG
Sbjct: 555 --NALVSLYARCGRIKEAYLEFEKIDAKDSIS-WNGLISG 591



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 130/497 (26%), Positives = 245/497 (49%), Gaps = 4/497 (0%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M   GI  +  T+I  L  C         +++HG I++        + N L+D+Y     
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +D   KVFE M ++ V SW+ +  GF E K   +   LF   I     P  ++F+ +LR 
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 357 C-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C G  + +    Q+    +  G L    +++ LI ++ + G +  A  VFDN+  K+  +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           W  ++SG+  N  + + +  FC +  +G+      F  V+  C + +   +  Q+H  + 
Sbjct: 181 WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVF 240

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G S   Y+C++L+  Y       ++ +  +  +  D  S+ +++S L  QG +  A+ 
Sbjct: 241 KYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALE 300

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +     KPD   + ++L++CA+ GA  + + +H +VIK G ++++ V  A++D Y 
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV 360

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
            C DIK A   F  +  + +V+++N +++A+     +SE+  IF +M++  L P+Q T+ 
Sbjct: 361 NCSDIKTAHEMF-LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYP 419

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           S++  C+  G +D G  +   +  + G Q +      L+DM +++G L D  HVI     
Sbjct: 420 SILRTCTSVGALDLGEQIHTQV-IKTGFQFNVYVCSVLIDMYAKHGKL-DTAHVILRTLT 477

Query: 716 QPSPTVYRSLLSGCRIH 732
           +     + +L+SG   H
Sbjct: 478 EDDVVSWTALISGYAQH 494



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 204/420 (48%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L+ D + +A  LS   +  +   G Q+H +++K G ++D+ ++  L+ +Y  C      
Sbjct: 309 YLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTA 368

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             +F      N+V W +++ A  +        +++  M+  G +PN+F   S+++ C S+
Sbjct: 369 HEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSV 428

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           GA + G  IH   +K   + N +V   +++ YAK G +  A  +  +++ DDV  W A+I
Sbjct: 429 GALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALI 488

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GYA      EAL     ML  GI  D   F +A+  C+ +   + GRQIH     S   
Sbjct: 489 SGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYS 548

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             +SI NAL+ +Y +   +  A+  FE++  KD ISWN L  GF+++        +F + 
Sbjct: 549 EDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQM 608

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             +    +  TF   +     + ++  G Q+  + +  GF  +  V+++LI  + +CG++
Sbjct: 609 NRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSI 668

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           E A   F  +  KN  +WN +++GY  +    + +  F  + + G   N  TF  V+  C
Sbjct: 669 EDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 728



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I  + ++S    +++   G Q+H      G++ D+ + N L+++Y++CG      
Sbjct: 512 IQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAY 571

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+++  ++ +SW  ++S   Q+G  +  LK++  M       + F  GS +    ++ 
Sbjct: 572 LEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIA 631

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH   +K   + +  V  +++ FYAK G +  A R F  +   +   WNAMI 
Sbjct: 632 NIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMIT 691

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-------ADFDIGRQIHGLI 272
           GY+  GYG EA+N+   M   G   +  TF+  L  CS V         F+   + HGL+
Sbjct: 692 GYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLV 751

Query: 273 IR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
            + +   C       ++D+  ++  +  A K  E M  + D   W TL    + +KN
Sbjct: 752 PKPAHYAC-------VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKN 801


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/702 (29%), Positives = 378/702 (53%), Gaps = 9/702 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   V  G  +DI +   L  M+ +CG      +  +  A+R++V +  +++A  Q
Sbjct: 303 GKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ 362

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G ++   + Y  M+++G + N     SV+  C +  A   G  IH    ++    +  +
Sbjct: 363 HGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQI 422

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++ YA+ GD+  A  +F ++   D+  WNA+I GYA      EA+ +   M  EG+
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGV 482

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              + TF++ L  C+  + +  G+ IH  I+RS ++ +  + NAL++MY +   +  A  
Sbjct: 483 KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE    +D+ISWN++  G +++ +      LF +    G  P+ +TF+ +L  C     
Sbjct: 543 VFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEA 602

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+LG Q+  L +  G   + N+ ++LI M+ RCG+++ A+ VF ++ ++N+ +W  ++ G
Sbjct: 603 LELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGG 662

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC----CRSENQQMVGQIHGAIIKTG 478
           +     D    + F  +   G +    TF  +++ C    C  E ++++      I+ +G
Sbjct: 663 FADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAH----ILNSG 718

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           +     + ++LI +Y   G + ++ +  +     D+ SW  M++     G    A+   +
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAY 778

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            + E G   +++   +ILN+C++  A +  K +H  ++K     +V V +A+I  YAKCG
Sbjct: 779 QMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCG 838

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A+  FD +F   +V+ +N +I AYA HGL S+A++ F+ M    ++P  +TF S++
Sbjct: 839 SLEEAQEVFD-NFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSIL 897

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC+H GLV +G  +F S++SQ+G+ P+ + YGCLV +L R G  ++A+ +I  MPF P 
Sbjct: 898 SACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPD 957

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ +LL  CRIHGN  L E A+   L L  +N A +VLLS
Sbjct: 958 AAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLS 999



 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 173/657 (26%), Positives = 318/657 (48%), Gaps = 2/657 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S     ++H  +V+ G   DIFL N LI MY KC       +VF +M  R+++SW  ++
Sbjct: 96  RSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLI 155

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S   Q G      +++ +M+T GF+P++    S++  C S    E+G  IH   ++   +
Sbjct: 156 SCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           ++P V  S+LN Y K  D+ +A +VF  I   DV  +N M+G YA   Y  E + +   M
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM 275

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EGI  DK T+IN L   +  +  D G++IH L +   +   I +  AL  M+++   +
Sbjct: 276 SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDV 335

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A +  E  AD+DV+ +N L    +++ +  +    +++    G   N  T+  +L  C
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
                L  G  +       G   +  + +SLI M+ RCG +  A  +F+ +  +++ +WN
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++GY       + +K +  +   GV+    TF +++  C  S        IH  I+++
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G  S G++ ++L+  Y   G +  +     G    D+ SW +M++     G    A  +F
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLF 575

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             + + G +PD+    ++L  C    A +  + IH  +I+ G   +V + +A+I+ Y +C
Sbjct: 576 LEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRC 635

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G ++ A   F  S    +V+ +  +I  +A  G   +A E+F +M+    +P ++TF S+
Sbjct: 636 GSLQDAYEVF-HSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSI 694

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + AC     +D+G  +   + +  G +        L+   S++G + DA+ V + MP
Sbjct: 695 LKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 166/649 (25%), Positives = 316/649 (48%), Gaps = 2/649 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I++ G+  D  +QN+L+ MY KC       +VF  +  R++VS+  ++    Q
Sbjct: 202 GKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQ 261

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
               +  + ++  M + G  P++    +++    +    + G  IH  A+   +  +  V
Sbjct: 262 KAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRV 321

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++   + + GDVA A++   + +  DV  +NA+I   A  G+  EA      M  +G+
Sbjct: 322 GTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGV 381

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            M++ T+++ L  CS       G  IH  I        + I N+LI MY +   +  A +
Sbjct: 382 VMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARE 441

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M  +D+ISWN +  G++  ++ G+   L+ +    G +P  VTF  LL  C     
Sbjct: 442 LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G  +    L  G     ++ ++L+ M+ RCG++  A +VF+    ++I +WN +++G
Sbjct: 502 YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAG 561

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +  +       K F  + + G+E +  TF  V+  C   E  ++  QIH  II++G    
Sbjct: 562 HAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLD 621

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y+  G L +++E  +     ++ SW AM+     QG + +A  +F  +  
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G KP +    +IL +C +       K +   ++  G+  +  V +A+I AY+K G +  
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTD 741

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD+  N  D++ +N +I  YA +GL   A++   +M+   +  ++ +FVS+++ACS
Sbjct: 742 ARKVFDKMPN-RDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACS 800

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
               +++G  +   +  +  MQ        L+ M ++ G LE+A+ V +
Sbjct: 801 SFSALEEGKRVHAEI-VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 174/656 (26%), Positives = 318/656 (48%), Gaps = 12/656 (1%)

Query: 40   LRKDPIFLAKSLSLS-----ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
            +R D + + ++  LS        K+   G  +H HI ++G ++D+ + N+LI+MY++CG 
Sbjct: 376  MRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGD 435

Query: 95   FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                  +F+ M +R+L+SW  I++   +  +    +K+Y  M++ G  P       ++  
Sbjct: 436  LPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSA 495

Query: 155  CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            C +  A   G  IH   L+  I+ N  +  +++N Y + G +  A+ VF    + D+  W
Sbjct: 496  CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISW 555

Query: 215  NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            N+MI G+A  G    A  +   M  EG+  DK TF + L GC      ++GRQIH LII 
Sbjct: 556  NSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIE 615

Query: 275  SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
            S ++  +++ NALI+MYI+   +  A++VF  +  ++V+SW  + GGF++     +   L
Sbjct: 616  SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675

Query: 335  FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
            F +    G +P   TFS +L+ C     LD G ++    L+ G+  +  V ++LI  + +
Sbjct: 676  FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK 735

Query: 395  CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
             G++  A  VFD +  ++I +WN++++GY  N      L+    + E GV +N  +F  +
Sbjct: 736  SGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSI 795

Query: 455  VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLD 513
            +  C      +   ++H  I+K        + ++LI  Y   G L+ + E F N  E+ +
Sbjct: 796  LNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK-N 854

Query: 514  MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-H 572
            + +W AM++A    G   +A+  F+ + + G KPD     +IL++C   G       I  
Sbjct: 855  VVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFS 914

Query: 573  PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
                + G +  +     ++    + G  + A    +Q     D  V+ TL+ A   HG V
Sbjct: 915  SLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNV 974

Query: 633  SEAMEIFDK-MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            + A    +  +KL    P  A +V + +  +  G  D    + + M+ + G++  P
Sbjct: 975  ALAEHAANNALKLNARNP--AVYVLLSNVYAAAGRWDDVAKIRRVMEGR-GIRKEP 1027



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 277/581 (47%), Gaps = 15/581 (2%)

Query: 138 TNGFMP-----NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           +N + P     N  A   +++ C    +      IH   ++  +  + F+   ++N Y K
Sbjct: 70  SNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVK 129

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
              V+ A +VF  +   DV  WN++I  YA  G+  +A  +   M   G    K T+I+ 
Sbjct: 130 CRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISI 189

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  C   A+ + G++IH  II +  +    + N+L++MY K   +  A +VF  +  +DV
Sbjct: 190 LTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDV 249

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +S+NT+ G +++     +   LF +    G  P+ VT+  LL        LD G ++  L
Sbjct: 250 VSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKL 309

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A++ G   +  V ++L  MF RCG V  A    +  + +++  +N L++    +    + 
Sbjct: 310 AVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEA 369

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
            + +  +   GV +N  T+  V+  C  S+       IH  I + G SS   I +SLI  
Sbjct: 370 FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L  + E  N   + D+ SW A+++    +    EA+ ++  +   G KP     
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTF 489

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
             +L++C    AY   K IH  +++ G  +  ++A+A+++ Y +CG I  A+  F+ +  
Sbjct: 490 LHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT-R 548

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG-- 670
           + D+I +N++I  +A HG    A ++F +MK   L+P + TF SV+  C +   ++ G  
Sbjct: 549 ARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQ 608

Query: 671 --CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              L+ +S     G+Q   +    L++M  R G L+DA  V
Sbjct: 609 IHMLIIES-----GLQLDVNLGNALINMYIRCGSLQDAYEV 644



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 174/374 (46%), Gaps = 5/374 (1%)

Query: 344 RP---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           RP   N   +  L++ C +   L    ++    +  G   +  +++ LI M+ +C +V  
Sbjct: 76  RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           AH VF  +  +++ +WN L+S Y          + F  +  +G   +  T+  ++  CC 
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCS 195

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   +IH  II+ G+     + +SL+  Y     L ++ +  +G  R D+ S+  M
Sbjct: 196 PAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTM 255

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +     + +  E + +F  +   G  PD+     +L++          K IH   +  G 
Sbjct: 256 LGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGL 315

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           N+++ V +A+   + +CGD+ GA+ A  ++F   DV+VYN LI A A HG   EA E + 
Sbjct: 316 NSDIRVGTALATMFVRCGDVAGAKQAL-EAFADRDVVVYNALIAALAQHGHYEEAFEQYY 374

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M+   +  ++ T++SV++ACS    +  G L+   + S+ G          L+ M +R 
Sbjct: 375 QMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHI-SEVGHSSDVQIGNSLISMYARC 433

Query: 701 GYLEDAKHVIEIMP 714
           G L  A+ +   MP
Sbjct: 434 GDLPRARELFNTMP 447


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/696 (30%), Positives = 363/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  G  +   + N LI +YS+ G+     RVFD +  ++  SW  ++S   +N 
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++ DM   G MP  +A  SV+  C  + + E G  +H   LK+    + +V  
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ Y  LG++ +AE +F ++S  D   +N +I G + CGYG +A+ +   M  +G+  
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + +  CS       G+Q+H    +     +  I  AL+++Y K + ++ A   F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   +    +   +  +F +  +    PN  T+  +L+ C +L DL+
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +   F     V S LI M+ + G ++ A  +    + K++ +W  +++GY 
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               D   L TF  + + G+  +       V  C   +  +   QIH     +GFSS   
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             ++L+  Y   G+++ S+      E  D  +W A++S     G+N EA+ +F  +   G
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
              + +  G+ + + +     ++ K +H  + K G+++E  V +A+I  YAKCG I  A 
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N+V  +N +I AY+ HG  SEA++ FD+M  +N++P+  T V V+SACSH 
Sbjct: 748 KQFLEVSTKNEV-SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVDKG   F+SM+S+YG+ P P+ Y C+VDML+R G L  AK  I+ MP +P   V+R+
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N E+GE+A+  LL L P++ A +VLLS
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/653 (25%), Positives = 298/653 (45%), Gaps = 6/653 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I+KLG  ++  L   L   Y   G      +VFDEM ER + +W  ++     
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
                    ++V M +    PNE     V++ C   G+  F     IH   L   +  + 
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDST 222

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V   +++ Y++ G V  A RVF  +   D   W AMI G +      EA+ +   M   
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI    Y F + L  C  +   +IG Q+HGL+++        + NAL+ +Y     +  A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M+ +D +++NTL  G S+     +   LF +  L G  P+  T + L+  C   
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G QL       GF     +  +L+ ++ +C  +E A   F     +N+  WN +L
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y       +  + F  +    +  N  T+  +++TC R  + ++  QIH  IIKT F 
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              Y+CS LI  Y   G+LD +++        D+ SW  M++       + +A+T F  +
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           ++ G + DE  L   +++CA + A +  + IH      GF++++   +A++  Y++CG I
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + + +AF+Q+  + D I +N L+  +   G   EA+ +F +M    +  +  TF S + A
Sbjct: 643 EESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEI 712
            S    + +G  +  ++ ++ G     +    L+ M ++ G + DA K  +E+
Sbjct: 702 ASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 293/616 (47%), Gaps = 8/616 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS  + ++S  +G Q+HG ++KLGF++D ++ N L+++Y   G       +F 
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M++R+ V++  +++   Q G  +  ++++  M  +G  P+   + S++  C + G    
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K+    N  +  ++LN YAK  D+  A   F     ++V  WN M+  Y  
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 +  +   M  E I  ++YT+ + L+ C  + D ++G QIH  II++  + +  +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A+ +  R A KDV+SW T+  G+++     +  + F + +  G 
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R + V  +  +  C  L  L  G Q+   A   GF  +    ++L+ ++ RCG +E ++ 
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+     +   WN L+SG+  +  + + L+ F  +   G++ N  TF   V+    + N
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   Q+H  I KTG+ S   +C++LI  Y   G + ++ +        +  SW A+++A
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNT 582
               G   EA+  F  ++ +  +P+   L  +L++C+ IG   +          + G + 
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI--FD 640
           +      V+D   + G +  A+    +     D +V+ TL+ A   H    + MEI  F 
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH----KNMEIGEFA 883

Query: 641 KMKLANLQPSQ-ATFV 655
              L  L+P   AT+V
Sbjct: 884 AHHLLELEPEDSATYV 899



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 250/480 (52%), Gaps = 6/480 (1%)

Query: 234 VSSMLFEGITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S+   GI  +  T    L+GC       D GR++H  I++  ++ +  +   L D Y+
Sbjct: 72  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
               +  AFKVF+ M ++ + +WN +    +     G+   LF + +     PN  TFS 
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191

Query: 353 LLRQC-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
           +L  C G  +  D+  Q+    L+ G  D   V + LI ++ R G V++A  VFD +  K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           + ++W  ++SG   N C+A+ ++ FC+++  G+      F  V+  C + E+ ++  Q+H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHN 530
           G ++K GFSS  Y+C++L+  Y + G L ++   FSN ++R D  ++  +++ L   G+ 
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYG 370

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            +A+ +F  +   G +PD   L +++ +C+A G   R + +H +  KLGF +   +  A+
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ++ YAKC DI+ A   F ++   N V+++N +++AY     +  +  IF +M++  + P+
Sbjct: 431 LNLYAKCADIETALDYFLETEVEN-VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           Q T+ S++  C   G ++ G  +   +  +   Q +      L+DM ++ G L+ A  ++
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 271/607 (44%), Gaps = 13/607 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           ++  G  PN   +  +++ C+   G+ + G  +H   LK+ ++ N  +   + +FY   G
Sbjct: 75  VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           D+  A +VF  +    +  WN MI   A      E   +   M+ E +T ++ TF   L+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194

Query: 255 GCS--LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C    VA FD+  QIH  I+   +  S  + N LID+Y ++  +D A +VF+ +  KD 
Sbjct: 195 ACRGGSVA-FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
            SW  +  G S+N+   +   LF    + G  P    FS +L  C K+  L++G QL  L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            L  GF  +  V ++L+ ++   G +  A  +F N+S ++  T+N L++G          
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ F  +   G+E +  T   +V  C          Q+H    K GF+S   I  +L+  
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y     ++ + ++    E  ++  W  M+ A         +  IF  +      P++Y  
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            +IL +C  +G  +  + IH  +IK  F    YV S +ID YAK G +  A     + F 
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR-FA 552

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             DV+ + T+I  Y  +    +A+  F +M    ++  +    + +SAC+    + +G  
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-- 610

Query: 673 LFKSMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
             + + +Q    G          LV + SR G +E++    E      +   + +L+SG 
Sbjct: 611 --QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGF 667

Query: 730 RIHGNKE 736
           +  GN E
Sbjct: 668 QQSGNNE 674



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 14/299 (4%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R D + L  ++S    L++   G Q+H      GF++D+  QN L+ +YS+CG   
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
                F++    + ++W  +VS   Q+G  +  L+++V M   G   N F  GS +K   
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                + G  +H    K   +    V  ++++ YAK G ++ AE+ F  +S+ +   WNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIH 269
           +I  Y+  G+G EAL+    M+   +  +  T +  L  CS +   D G          +
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
           GL  + E    +      +DM  ++  +  A +  + M  K D + W TL      +KN
Sbjct: 824 GLSPKPEHYVCV------VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/696 (30%), Positives = 363/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  G  +   + N LI +YS+ G+     RVFD +  ++  SW  ++S   +N 
Sbjct: 168 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 227

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++ DM   G MP  +A  SV+  C  + + E G  +H   LK+    + +V  
Sbjct: 228 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 287

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ Y  LG++ +AE +F ++S  D   +N +I G + CGYG +A+ +   M  +G+  
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + +  CS       G+Q+H    +     +  I  AL+++Y K + ++ A   F
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   +    +   +  +F +  +    PN  T+  +L+ C +L DL+
Sbjct: 408 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +   F     V S LI M+ + G ++ A  +    + K++ +W  +++GY 
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               D   L TF  + + G+  +       V  C   +  +   QIH     +GFSS   
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 587

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             ++L+  Y   G+++ S+      E  D  +W A++S     G+N EA+ +F  +   G
Sbjct: 588 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 647

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
              + +  G+ + + +     ++ K +H  + K G+++E  V +A+I  YAKCG I  A 
Sbjct: 648 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 707

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N+V  +N +I AY+ HG  SEA++ FD+M  +N++P+  T V V+SACSH 
Sbjct: 708 KQFLEVSTKNEV-SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 766

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVDKG   F+SM+S+YG+ P P+ Y C+VDML+R G L  AK  I+ MP +P   V+R+
Sbjct: 767 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 826

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N E+GE+A+  LL L P++ A +VLLS
Sbjct: 827 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 862



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/653 (25%), Positives = 298/653 (45%), Gaps = 6/653 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I+KLG  ++  L   L   Y   G      +VFDEM ER + +W  ++     
Sbjct: 64  GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 123

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
                    ++V M +    PNE     V++ C   G+  F     IH   L   +  + 
Sbjct: 124 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDST 182

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V   +++ Y++ G V  A RVF  +   D   W AMI G +      EA+ +   M   
Sbjct: 183 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 242

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI    Y F + L  C  +   +IG Q+HGL+++        + NAL+ +Y     +  A
Sbjct: 243 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M+ +D +++NTL  G S+     +   LF +  L G  P+  T + L+  C   
Sbjct: 303 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 362

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G QL       GF     +  +L+ ++ +C  +E A   F     +N+  WN +L
Sbjct: 363 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 422

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y       +  + F  +    +  N  T+  +++TC R  + ++  QIH  IIKT F 
Sbjct: 423 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 482

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              Y+CS LI  Y   G+LD +++        D+ SW  M++       + +A+T F  +
Sbjct: 483 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 542

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           ++ G + DE  L   +++CA + A +  + IH      GF++++   +A++  Y++CG I
Sbjct: 543 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 602

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + + +AF+Q+  + D I +N L+  +   G   EA+ +F +M    +  +  TF S + A
Sbjct: 603 EESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 661

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEI 712
            S    + +G  +  ++ ++ G     +    L+ M ++ G + DA K  +E+
Sbjct: 662 ASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 713



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 293/616 (47%), Gaps = 8/616 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS  + ++S  +G Q+HG ++KLGF++D ++ N L+++Y   G       +F 
Sbjct: 248 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M++R+ V++  +++   Q G  +  ++++  M  +G  P+   + S++  C + G    
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K+    N  +  ++LN YAK  D+  A   F     ++V  WN M+  Y  
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 427

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 +  +   M  E I  ++YT+ + L+ C  + D ++G QIH  II++  + +  +
Sbjct: 428 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 487

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A+ +  R A KDV+SW T+  G+++     +  + F + +  G 
Sbjct: 488 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 547

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R + V  +  +  C  L  L  G Q+   A   GF  +    ++L+ ++ RCG +E ++ 
Sbjct: 548 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 607

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+     +   WN L+SG+  +  + + L+ F  +   G++ N  TF   V+    + N
Sbjct: 608 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 667

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   Q+H  I KTG+ S   +C++LI  Y   G + ++ +        +  SW A+++A
Sbjct: 668 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 727

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNT 582
               G   EA+  F  ++ +  +P+   L  +L++C+ IG   +          + G + 
Sbjct: 728 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 787

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI--FD 640
           +      V+D   + G +  A+    +     D +V+ TL+ A   H    + MEI  F 
Sbjct: 788 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH----KNMEIGEFA 843

Query: 641 KMKLANLQPSQ-ATFV 655
              L  L+P   AT+V
Sbjct: 844 AHHLLELEPEDSATYV 859



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 250/480 (52%), Gaps = 6/480 (1%)

Query: 234 VSSMLFEGITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S+   GI  +  T    L+GC       D GR++H  I++  ++ +  +   L D Y+
Sbjct: 32  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 91

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
               +  AFKVF+ M ++ + +WN +    +     G+   LF + +     PN  TFS 
Sbjct: 92  FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 151

Query: 353 LLRQC-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
           +L  C G  +  D+  Q+    L+ G  D   V + LI ++ R G V++A  VFD +  K
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           + ++W  ++SG   N C+A+ ++ FC+++  G+      F  V+  C + E+ ++  Q+H
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 271

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHN 530
           G ++K GFSS  Y+C++L+  Y + G L ++   FSN ++R D  ++  +++ L   G+ 
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYG 330

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            +A+ +F  +   G +PD   L +++ +C+A G   R + +H +  KLGF +   +  A+
Sbjct: 331 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 390

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ++ YAKC DI+ A   F ++   N V+++N +++AY     +  +  IF +M++  + P+
Sbjct: 391 LNLYAKCADIETALDYFLETEVEN-VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 449

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           Q T+ S++  C   G ++ G  +   +  +   Q +      L+DM ++ G L+ A  ++
Sbjct: 450 QYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 270/607 (44%), Gaps = 13/607 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           ++  G  PN   +  +++ C+   G+ + G  +H   LK+ ++ N  +   + +FY   G
Sbjct: 35  VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 94

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           D+  A +VF  +    +  WN MI   A      E   +   M+ E +T ++ TF   L+
Sbjct: 95  DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 154

Query: 255 GCS--LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C    VA FD+  QIH  I+   +  S  + N LID+Y ++  +D A +VF+ +  KD 
Sbjct: 155 ACRGGSVA-FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 213

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
            SW  +  G S+N+   +   LF    + G  P    FS +L  C K+  L++G QL  L
Sbjct: 214 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 273

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            L  GF  +  V ++L+ ++   G +  A  +F N+S ++  T+N L++G          
Sbjct: 274 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 333

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ F  +   G+E +  T   +V  C          Q+H    K GF+S   I  +L+  
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 393

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y     ++ + ++    E  ++  W  M+ A         +  IF  +      P++Y  
Sbjct: 394 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 453

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            +IL +C  +G  +  + IH  +IK  F    YV S +ID YAK G +  A     + F 
Sbjct: 454 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR-FA 512

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             DV+ + T+I  Y  +    +A+  F +M    ++  +    + +SAC+    + +G  
Sbjct: 513 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-- 570

Query: 673 LFKSMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
             + + +Q    G          LV + SR G +E++    E          + +L+SG 
Sbjct: 571 --QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE-AGDNIAWNALVSGF 627

Query: 730 RIHGNKE 736
           +  GN E
Sbjct: 628 QQSGNNE 634



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 14/299 (4%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R D + L  ++S    L++   G Q+H      GF++D+  QN L+ +YS+CG   
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 603

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
                F++    + ++W  +VS   Q+G  +  L+++V M   G   N F  GS +K   
Sbjct: 604 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 663

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                + G  +H    K   +    V  ++++ YAK G ++ AE+ F  +S+ +   WNA
Sbjct: 664 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 723

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIH 269
           +I  Y+  G+G EAL+    M+   +  +  T +  L  CS +   D G          +
Sbjct: 724 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 783

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
           GL  + E    +      +DM  ++  +  A +  + M  K D + W TL      +KN
Sbjct: 784 GLSPKPEHYVCV------VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 836


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/700 (29%), Positives = 373/700 (53%), Gaps = 3/700 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
             +V   + ++G   D      +I  Y   G      ++F ++   N+V+W +++S   +
Sbjct: 227 AVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAK 286

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  +  +  ++++K  G      ++GSV+    S+    +G  +H  A+K  ++ N +V
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYV 346

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N YAK   + AA++VF S+   ++  WNAM+GG+A  G   E +   S M   G 
Sbjct: 347 GSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGP 406

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D++TF +    C+ +   D G Q+H ++I+++   ++ + NAL+DMY KS  +  A K
Sbjct: 407 QPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARK 466

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            FE M   D +SWN +  G+ + +   +   +F + + +G  P+ V+ + ++  C  + +
Sbjct: 467 QFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKE 526

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G Q  CL +  G        SSLI M+ +CG V  A  VF ++ Y+N+ + N L++G
Sbjct: 527 FKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAG 586

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SS 481
           Y  +  + + +  F  I   G++    TF  +++ C  +    +  QIHG ++K GF SS
Sbjct: 587 YTMSHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645

Query: 482 CGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              +C SL+  Y+N  +  D+   FS       +  W A++S    Q H+ +A+  +  +
Sbjct: 646 SEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                 PD+    ++L +CA + + Q  + +H  +   GFN +    S++ID YAKCGD+
Sbjct: 706 RSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDV 765

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           KG+   F +    N VI +N++I+  A +G   EA+EIF +M+  ++ P + TF+ V+SA
Sbjct: 766 KGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH G V +G  +F  M + Y +QP  D  GC+VD+L R G+L +A+  I  +  +  P 
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM 885

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++ +LL  CR HG++  G+ A+ KL+ L P++ +++VLLS
Sbjct: 886 LWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLS 925



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/618 (26%), Positives = 286/618 (46%), Gaps = 7/618 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   +L     G+ VH   +K G  +++++ + L+ MY+KC       +VF+ + 
Sbjct: 312 LGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG 371

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN+V W  ++    QNG     ++ +  MK +G  P+EF   S+   C S+   +FG  
Sbjct: 372 ERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQ 431

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   N FV  ++++ YAK G +  A + F  +   D   WNA+I GY    Y
Sbjct: 432 LHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEY 491

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA  +   M+  G+  D+ +  + +  C+ V +F  G+Q H L+++  ++ S    ++
Sbjct: 492 NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSS 551

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY+K   +  A  VF  M  ++V+S N L  G++ + +  +   LF +  + G +P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPT 610

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTF+ LL  C     L+LG Q+    +  GFL   E V  SL+ M+        + ++F
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLF 670

Query: 406 DNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             + Y K +  W  L+SGY         L+ + ++    +  +  TF  V+  C    + 
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSL 730

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
           Q   ++H  I  TGF+     CSSLI  Y   G +  S + F     R  + SW +M+  
Sbjct: 731 QTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVG 790

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNT 582
           L   G+  EA+ IF  + +    PDE     +L++C+  G     + +   ++       
Sbjct: 791 LAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQP 850

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V     ++D   + G +  A    ++     D ++++TL+ A   HG   E        
Sbjct: 851 RVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHG--DEVRGKRAAN 908

Query: 643 KLANLQPSQATFVSVMSA 660
           KL  L+P  ++   ++S 
Sbjct: 909 KLMELKPQSSSSYVLLSG 926



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 278/608 (45%), Gaps = 43/608 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K+G      L N ++ +Y KCG   +  + F  + ++++ +W  ++S  + +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           F   ++ +V M  +G  PNEF    V+  C  +    +G  +HC   K+      F    
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YAK  ++  A  VF    + D   W  +I GY   G+  EA+ V   M   G   D
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPD 242

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +                                  ++++NA    Y+    +  A K+F 
Sbjct: 243 QIAL-------------------------------VTVINA----YVALGRLADARKLFT 267

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++ + +V++WN +  G ++     +  S F +   +G +    +   +L     L  L+ 
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A+  G  D   V S+L+ M+ +C  ++ A  VF+++  +NI  WN +L G+  
Sbjct: 328 GSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    +V++ F  +   G + +  TF  +   C         GQ+H  +IK  F+S  ++
Sbjct: 388 NGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFV 447

Query: 486 CSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++L+  Y   G L  +   FEF    +  D  SW A++   V + +N EA  +F  +V 
Sbjct: 448 ANALVDMYAKSGALKEARKQFEF---MKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVS 504

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PDE  L +I+++CA +  +++ +  H  ++K+G +T     S++ID Y KCG +  
Sbjct: 505 NGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLA 564

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  F  S    +V+  N LI  Y    L  EA+ +F ++++  L+P++ TF  ++  C 
Sbjct: 565 ARDVF-YSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 663 HKGLVDKG 670
              +++ G
Sbjct: 623 GAFMLNLG 630



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/698 (23%), Positives = 307/698 (43%), Gaps = 38/698 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    A  LS    L+    G QVH  + K+GF    F Q  LI MY+KC       
Sbjct: 138 VRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDAR 197

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD     + VSWT +++  +++G     +K++  M+  G +P++ A+           
Sbjct: 198 LVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIAL----------- 246

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                                    +V+N Y  LG +A A ++F  I + +V  WN MI 
Sbjct: 247 ------------------------VTVINAYVALGRLADARKLFTQIPNPNVVAWNVMIS 282

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+A  G+  EA++    +   G+   + +  + L   + ++  + G  +H   I+  ++ 
Sbjct: 283 GHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDD 342

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ + +AL++MY K S MD A +VF  + +++++ WN + GGF++N    +    F    
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMK 402

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G +P+  TF+ +   C  L  LD G QL  + +   F     V ++L+ M+ + GA++
Sbjct: 403 RHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALK 462

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F+ +   +  +WN ++ GY     + +    F  +  +GV  +  +   +V  C 
Sbjct: 463 EARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACA 522

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             +  +   Q H  ++K G  +     SSLI  YV  G +  + +        ++ S  A
Sbjct: 523 NVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINA 582

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++      H  EA+ +F  +   G KP E     +L+ C         + IH  V+K G
Sbjct: 583 LIAGYT-MSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 580 F-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           F ++   V  +++  Y        +   F +      ++V+  LI  YA      +A++ 
Sbjct: 642 FLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           +  M+  N+ P QATF SV+ AC+    +  G  +  S+    G          L+DM +
Sbjct: 702 YQHMRSDNILPDQATFASVLRACAGMSSLQTGQEV-HSLIFHTGFNMDEITCSSLIDMYA 760

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           + G ++ +  V   MP + S   + S++ G   +G  E
Sbjct: 761 KCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAE 798



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 37/322 (11%)

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           ++ ++ +CG V+ A   F  +  K++  WN +LS Y  +   A V+++F  +W  GV  N
Sbjct: 82  IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPN 141

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C   ++     Q+H  + K GF    +    LI  Y     L ++    +
Sbjct: 142 EFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFD 201

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           GA  LD  SW  +++  V  G   EAV +F  +   G  PD+  L T++N          
Sbjct: 202 GALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVIN---------- 251

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
                                    AY   G +  AR  F Q  N N V+ +N +I  +A
Sbjct: 252 -------------------------AYVALGRLADARKLFTQIPNPN-VVAWNVMISGHA 285

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   EA+  F ++K   L+ ++++  SV+SA +   +++ G ++      + G+  + 
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKE-GLDDNV 344

Query: 688 DCYGCLVDMLSRNGYLEDAKHV 709
                LV+M ++   ++ AK V
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQV 366



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 14/323 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA  +S   N+K    G Q H  +VK+G        ++LI MY KCG       VF
Sbjct: 510 DEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  RN+VS   ++ A       +  + ++ +++  G  P E     ++  C       
Sbjct: 570 YSMPYRNVVSINALI-AGYTMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN 628

Query: 163 FGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            G  IH   +K   +  +  V  S+L  Y      A +E +F  +     +  W A+I G
Sbjct: 629 LGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISG 688

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS----- 275
           YA   +  +AL     M  + I  D+ TF + L+ C+ ++    G+++H LI  +     
Sbjct: 689 YAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMD 748

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD-VISWNTLFGGFSENKNPGQTASL 334
           E+ CS     +LIDMY K   +  + +VF  M  ++ VISWN++  G ++N    +   +
Sbjct: 749 EITCS-----SLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEI 803

Query: 335 FHKFILSGSRPNHVTFSILLRQC 357
           F +       P+ VTF  +L  C
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSAC 826



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 10/239 (4%)

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   +K G    G + + ++  YV  G +D + +  +  E+ D+ +W +++S  +  G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
               V  F  +   G +P+E+    +L++C+ +      K +H  V K+GF    +    
Sbjct: 123 FATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGG 182

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKC +++ AR+ FD + N  D + + TLI  Y   G   EA+++FDKM+     P
Sbjct: 183 LIDMYAKCRNLRDARLVFDGALNL-DTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP 241

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD--CYGCLVDMLSRNGYLEDA 706
            Q   V+V++A    G +     LF  +       P+P+   +  ++   ++ G+ E+A
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQI-------PNPNVVAWNVMISGHAKRGFAEEA 293



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 12/192 (6%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           SD+ L     F A  L     + S   G +VH  I   GF  D    ++LI MY+KCG  
Sbjct: 707 SDNILPDQATF-ASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDV 765

Query: 96  GWGLRVFDEMAERN-LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
              L+VF EM  RN ++SW  ++    +NG  +  L+++  M+    +P+E     V+  
Sbjct: 766 KGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 155 C-----VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-S 208
           C     VS G   F   ++ + L+ R++    +GC V +   + G +  AE     +   
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLQPRVDH---LGCMV-DILGRWGFLNEAEEFINKLGCK 881

Query: 209 DDVGCWNAMIGG 220
            D   W+ ++G 
Sbjct: 882 ADPMLWSTLLGA 893



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 10/156 (6%)

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A + A    K IH   +K+G   +  + + ++D Y KCG++  A+ AF +     DV  +
Sbjct: 52  AVLQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSR-LEKKDVFAW 110

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFK 675
           N+++  Y  HGL +  ++ F  M    ++P++ TF  V+SACS    ++ G    C +FK
Sbjct: 111 NSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFK 170

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
                 G      C G L+DM ++   L DA+ V +
Sbjct: 171 -----MGFGFRSFCQGGLIDMYAKCRNLRDARLVFD 201


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/701 (30%), Positives = 368/701 (52%), Gaps = 6/701 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H HI++ GF +D+ ++  L+ MY KCG       +FD+M ERN++SWT+++     
Sbjct: 238 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAH 297

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G       +++ M+  GF+PN +   S++    S GA E+   +H  A+   +  +  V
Sbjct: 298 YGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRV 357

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ YAK G +  A  VF  ++  D+  W  MIGG A  G G EA ++   M   G 
Sbjct: 358 GNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGC 417

Query: 243 TMDKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
             +  T+++ L   ++ +    +  + +H     +     + I NALI MY K   +D A
Sbjct: 418 LPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDA 477

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M D+DVISWN + GG ++N    +  ++F +    G  P+  T+  LL   G  
Sbjct: 478 RLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGST 537

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+   ++   A+  G + +  V S+ I+M+ RCG+++ A  +FD +S +++TTWN ++
Sbjct: 538 DALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMI 597

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G     C  + L  F  +   G   +  TF  ++      E  + V ++H      G  
Sbjct: 598 GGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV 657

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               + ++L+ +Y   G +  + + F +  ER ++ +W  M+  L   G  H+A + F  
Sbjct: 658 DL-RVGNALVHTYSKCGNVKYAKQVFDDMVER-NVTTWTMMIGGLAQHGCGHDAFSHFLQ 715

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++  G  PD     +IL++CA+ GA +  K +H   +  G  +++ V +A++  YAKCG 
Sbjct: 716 MLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGS 775

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  AR  FD      DV  +  +I   A HG   EA++ F KMK    +P+  ++V+V++
Sbjct: 776 IDDARSVFDDMVE-RDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLT 834

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLVD+G   F SM   YG++P+ + Y C+VD+L R G LE+A+  I  MP +P  
Sbjct: 835 ACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDD 894

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             + +LL  C  +GN E+ E+A+++ L L PK+ + +VLLS
Sbjct: 895 APWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLS 935



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 166/655 (25%), Positives = 317/655 (48%), Gaps = 5/655 (0%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +L  QVH  I+K G   ++++ N L+ +Y +CG      +VFD++ ++N+  WT ++   
Sbjct: 135 LLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGY 194

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  +++Y  M+     PNE    S++K C      ++G  IH   ++   + + 
Sbjct: 195 AEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDV 254

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  +++N Y K G +  A+ +F  +   +V  W  MIGG AH G G EA ++   M  E
Sbjct: 255 RVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQRE 314

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + YT+++ L   +     +  +++H   + + +   + + NAL+ MY KS  +D A
Sbjct: 315 GFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDA 374

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC--G 358
             VF+ M ++D+ SW  + GG +++    +  SLF +   +G  PN  T+  +L      
Sbjct: 375 RVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIA 434

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               L+    +   A   GF+ +  + ++LI+M+ +CG+++ A  VFD +  +++ +WN 
Sbjct: 435 STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNA 494

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ G   N C  +    F  + + G+  +  T+  ++ T   ++  + V ++H   ++TG
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             S   + S+ I  Y+  G +D++    +      + +W AM+     Q    EA+++F 
Sbjct: 555 LISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFL 614

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G  PD      IL++     A +  K +H      G   ++ V +A++  Y+KCG
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCG 673

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           ++K A+  FD     N V  +  +I   A HG   +A   F +M    + P   T+VS++
Sbjct: 674 NVKYAKQVFDDMVERN-VTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSIL 732

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           SAC+  G ++    +     S  G+         LV M ++ G ++DA+ V + M
Sbjct: 733 SACASTGALEWVKEVHNHAVSA-GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM 786



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/639 (24%), Positives = 291/639 (45%), Gaps = 38/639 (5%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G   + F+  ++++ C+          +H   +K  +E+N +V   +L  Y + G +  
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A +VF  +   ++  W  MIGGYA  G+  +A+ V   M  E    ++ T+++ L+ C  
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
             +   G++IH  II+S  +  + +  AL++MY+K   ++ A  +F++M +++VISW  +
Sbjct: 232 PVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVM 291

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
            GG +      +   LF +    G  PN  T+  +L        L+   ++   A++ G 
Sbjct: 292 IGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGL 351

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V ++L++M+ + G+++ A  VFD ++ ++I +W  ++ G   +    +    F  
Sbjct: 352 ALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 411

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQM--VGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
           +  +G   N  T+  ++     +    +  V  +H    + GF S   I ++LI  Y   
Sbjct: 412 MQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC 471

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D++    +G    D+ SW AMM  L   G  HEA T+F  + + G  PD     ++L
Sbjct: 472 GSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           N+  +  A +    +H   ++ G  ++  V SA I  Y +CG I  AR+ FD+  +   V
Sbjct: 532 NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDK-LSVRHV 590

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA---------------- 660
             +N +I   A      EA+ +F +M+     P   TF++++SA                
Sbjct: 591 TTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH 650

Query: 661 CSHKGLVD--KGCLLF----KSMDSQYGMQPSPD-------CYGCLVDMLSRNGYLEDA- 706
            +  GLVD   G  L     K  + +Y  Q   D        +  ++  L+++G   DA 
Sbjct: 651 ATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAF 710

Query: 707 KHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            H ++++     P  T Y S+LS C   G     EW  E
Sbjct: 711 SHFLQMLREGIVPDATTYVSILSACASTGAL---EWVKE 746



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 225/453 (49%), Gaps = 7/453 (1%)

Query: 213 CWNAMIGGYAHCGYGF----EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           C NA + G A   +      +A+ ++   + +GI +D ++++N LQ C    D  + +Q+
Sbjct: 81  CANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQV 140

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  II+S +E ++ + N L+ +YI+   +  A +VF+++  K++  W T+ GG++E  + 
Sbjct: 141 HVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHA 200

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                ++ K      +PN +T+  +L+ C   ++L  G ++    +  GF  +  V ++L
Sbjct: 201 EDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETAL 260

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ +CG++E A  +FD +  +N+ +W  ++ G        +    F  +   G   N 
Sbjct: 261 VNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNS 320

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            T+  ++     +   + V ++H   +  G +    + ++L+  Y   G +D++    +G
Sbjct: 321 YTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDG 380

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC--AAIGAYQ 566
               D+ SW  M+  L   G   EA ++F  +   G  P+     +ILN+   A+  A +
Sbjct: 381 MTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALE 440

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K +H    + GF +++ + +A+I  YAKCG I  AR+ FD      DVI +N ++   
Sbjct: 441 WVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFD-GMCDRDVISWNAMMGGL 499

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           A +G   EA  +F +M+   L P   T++S+++
Sbjct: 500 AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLN 532


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/696 (30%), Positives = 360/696 (51%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  G      + N LI +YS+ G+     RVFD +  ++  SW  ++S   +N 
Sbjct: 191 QIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNE 250

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++ DM   G MP  +A  SV+  C  + + E G  +H   LK+    + +V  
Sbjct: 251 CEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 310

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ Y  LG + +AE +F ++S  D   +N +I G + CGYG +A+ +   M  +G+  
Sbjct: 311 ALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEP 370

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + +  CS       G+Q+H    +     +  I  AL+++Y K S ++ A   F
Sbjct: 371 DSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYF 430

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   +    +   +  +F +  +    PN  T+  +L+ C +L DL+
Sbjct: 431 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 490

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +   F     V S LI M+ + G ++ A  +    + K++ +W  +++GY 
Sbjct: 491 LGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               D   L TF  + + G+  +       V  C   +  +   QIH     +GFSS   
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 610

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             ++L+  Y   G ++ ++      E  D  +W A++S     G+N EA+ +F  +   G
Sbjct: 611 FQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREG 670

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
              + +  G+ + + +     ++ K +H  + K G+++E  V +A+I  YAKCG I  A+
Sbjct: 671 IDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAK 730

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N+V  +N +I AY+ HG  SEA++ FD+M  +N++P+  T V V+SACSH 
Sbjct: 731 KQFLELSMKNEV-SWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 789

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVDKG   F+SM+++YG+ P P+ Y C+VDML+R G L  AK  I  MP +P   V+R+
Sbjct: 790 GLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRT 849

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N E+GE+A+  LL L P++ A +VLLS
Sbjct: 850 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 885



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 170/647 (26%), Positives = 300/647 (46%), Gaps = 5/647 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I+KLGF N+  L   L+  Y   G     L+VFDEM ER + +W  ++     
Sbjct: 87  GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELAS 146

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
                    ++  M      PNE     V++ C   G+  F     IH   +   + K+ 
Sbjct: 147 RSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKST 205

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V   +++ Y++ G V  A RVF  +   D   W AMI G +      EA+ +   M   
Sbjct: 206 IVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVL 265

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI    Y F + L  C  +   +IG Q+HGL+++        + NAL+ +Y     +  A
Sbjct: 266 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M+ +D +++NTL  G S+     +   LF +  L G  P+  T + L+  C   
Sbjct: 326 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSD 385

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G QL       GF   + +  +L+ ++ +C  +E A + F     +N+  WN +L
Sbjct: 386 GTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVML 445

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y       +  + F  +    +  N  T+  +++TC R  + ++  QIH  IIKT F 
Sbjct: 446 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQ 505

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              Y+CS LI  Y   G+LD +++        D+ SW  M++       + +A+T F  +
Sbjct: 506 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 565

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           ++ G + DE  L   +++CA + A +  + IH      GF++++   +A++  Y+KCG+I
Sbjct: 566 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNI 625

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A +AF+Q+  + D I +N L+  +   G   EA+ +F +M    +  +  TF S + A
Sbjct: 626 EEAYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            S    + +G  +  ++ ++ G     +    ++ M ++ G + DAK
Sbjct: 685 ASETANMKQGKQV-HAVITKTGYDSETEVCNAIISMYAKCGSISDAK 730



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/625 (26%), Positives = 298/625 (47%), Gaps = 26/625 (4%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS  + ++S  +G Q+HG ++KLGF++D ++ N L+++Y   G       +F 
Sbjct: 271 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M++R+ V++  +++   Q G  +  ++++  M+ +G  P+   + S++  C S G    
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K+    N  +  ++LN YAK  D+  A   F     ++V  WN M+  Y  
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGL 450

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 +  +   M  E I  ++YT+ + L+ C  + D ++G QIH  II++  + +  +
Sbjct: 451 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYV 510

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A+ +  R A KDV+SW T+  G+++     +  + F + +  G 
Sbjct: 511 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 570

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R + V  +  +  C  L  L  G Q+   A   GF  +    ++L+ ++ +CG +E A+ 
Sbjct: 571 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYL 630

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+     +   WN L+SG+  +  + + L+ F  +   G++ N  TF   V+    + N
Sbjct: 631 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETAN 690

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS----FEFSNGAERLDMASWGA 519
            +   Q+H  I KTG+ S   +C+++I  Y   G + ++     E S   E     SW A
Sbjct: 691 MKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNE----VSWNA 746

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M++A    G   EA+  F  ++ +  +P+   L  +L++C+ IG     K I  F     
Sbjct: 747 MINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD--KGIEYFE---S 801

Query: 580 FNTEVYVASA------VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            NTE  +A        V+D   + G +  A+    +     D +V+ TL+ A   H    
Sbjct: 802 MNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVH---- 857

Query: 634 EAMEI--FDKMKLANLQPSQ-ATFV 655
           + MEI  F    L  L+P   AT+V
Sbjct: 858 KNMEIGEFAAHHLLELEPEDSATYV 882



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 243/473 (51%), Gaps = 6/473 (1%)

Query: 241 GITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           GI  +  T    L+GC       D GR++H  I++   + +  +   L+D Y+    +D 
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC-G 358
           A KVF+ M ++ + +WN +    +     G+   LF + +     PN  TFS +L  C G
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
             +  D+  Q+    ++ G      V + LI ++ R G V+ A  VFD +  K+ ++W  
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++SG   N C+ + ++ FC+++  G+      F  V+  C + E+ ++  Q+HG ++K G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           FSS  Y+C++L+  Y + G L ++   FSN ++R D  ++  +++ L   G+  +A+ +F
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGEKAMELF 360

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +   G +PD   L +++ +C++ G     + +H +  KLGF +   +  A+++ YAKC
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKC 420

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            DI+ A   F ++   N V+++N +++AY     +  +  IF +M++  + P+Q T+ S+
Sbjct: 421 SDIETALNYFLETEVEN-VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 479

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           +  C   G ++ G  +   +  +   Q +      L+DM ++ G L+ A  ++
Sbjct: 480 LKTCIRLGDLELGEQIHSQI-IKTSFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 271/604 (44%), Gaps = 15/604 (2%)

Query: 140 GFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           G  PN   +  +++ C+   G+ + G  +H   LK+  + N  +   +L+FY   GD+  
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS- 257
           A +VF  +    +  WN MI   A      +   +   M+ E +T ++ TF   L+ C  
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 258 -LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
             VA FD+  QIH  II   +  S  + N LID+Y ++  +D A +VF+ +  KD  SW 
Sbjct: 182 GSVA-FDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G S+N+   +   LF    + G  P    FS +L  C K+  L++G QL  L L  
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 300

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +  V ++L+ ++   G++  A  +F N+S ++  T+N L++G          ++ F
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVN 495
             +   G+E +  T   +V   C S+     G Q+H    K GF+S   I  +L+  Y  
Sbjct: 361 KRMQLDGLEPDSNTLASLV-VACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAK 419

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
              ++ +  +    E  ++  W  M+ A         +  IF  +      P++Y   +I
Sbjct: 420 CSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 479

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L +C  +G  +  + IH  +IK  F    YV S +ID YAK G +  A     + F   D
Sbjct: 480 LKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIR-FAGKD 538

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           V+ + T+I  Y  +    +A+  F +M    ++  +    + +SAC+    + +G    +
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG----Q 594

Query: 676 SMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
            + +Q    G          LV + S+ G +E+A    E          + +L+SG +  
Sbjct: 595 QIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQS 653

Query: 733 GNKE 736
           GN E
Sbjct: 654 GNNE 657



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 12/298 (4%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R D + L  ++S    L++   G Q+H      GF++D+  QN L+ +YSKCG   
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIE 626

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
                F++    + ++W  +VS   Q+G  +  L+++  M   G   N F  GS +K   
Sbjct: 627 EAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAAS 686

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                + G  +H    K   +    V  ++++ YAK G ++ A++ F  +S  +   WNA
Sbjct: 687 ETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNA 746

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------H 269
           MI  Y+  G+G EAL+    M+   +  +  T +  L  CS +   D G +        +
Sbjct: 747 MINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEY 806

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           GL  +   E  + +V+ L    + S   D+   + E   + D + W TL      +KN
Sbjct: 807 GLAPKP--EHYVCVVDMLTRAGLLSRAKDF---ILEMPIEPDALVWRTLLSACVVHKN 859


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/696 (30%), Positives = 366/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   +  G+ N +F+ N LI +Y K G+     +VFD + +R+ VSW  ++S   Q+G
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + ++  M T+G  P  +   SV+  C  +   + G  +H   LK       +V  
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCN 310

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y++LG+   AE+VF ++   D   +N++I G +  GY  +AL +   M  + +  
Sbjct: 311 ALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKP 370

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  CS V    +G+Q H   I++ +   I +  AL+D+Y+K S +  A + F
Sbjct: 371 DCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFF 430

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   +    N  ++  +F +  + G  PN  T+  +LR C  L  +D
Sbjct: 431 LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVD 490

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    L  GF     V+S LI M+ + G ++ A  +F  +  K++ +W  +++GY 
Sbjct: 491 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYA 550

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +   A+ L  F  + + G+  +   F   +  C   +      QIH     +G+S    
Sbjct: 551 QHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLS 610

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G++ +++   +     D  SW +++S     GH  EA+++F  + +AG
Sbjct: 611 VGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAG 670

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           ++ + +  G  +++ A +   +  K IH  +IK G ++E  V++ +I  YAKCG+I  A 
Sbjct: 671 QEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAE 730

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N+ I +N ++  Y+ HG   +A+ +F+ MK   + P+  TFV V+SACSH 
Sbjct: 731 RQFFEMPEKNE-ISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHV 789

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F+SM   +G+ P P+ Y C+VD+L R+G L  A+  +E MP QP   V R+
Sbjct: 790 GLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRT 849

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N ++GE+A+  LL L PK+ A +VLLS
Sbjct: 850 LLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLS 885



 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 170/621 (27%), Positives = 315/621 (50%), Gaps = 18/621 (2%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS    ++   +G Q+HG ++K GF+ + ++ N L+ +YS+ G F    +VF+
Sbjct: 271 PYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFN 330

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M +R+ VS+  ++S   Q G  D  L+++  M  +   P+   V S++  C S+GA   
Sbjct: 331 AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G   H +A+K  +  +  +  ++L+ Y K  D+  A   F S  +++V  WN M+  Y  
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGL 450

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                E+  + + M  EGI  +++T+ + L+ CS +   D+G QIH  ++++  + ++ +
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYV 510

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D+A K+F R+ +KDV+SW  +  G+++++   +  +LF +    G 
Sbjct: 511 SSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGI 570

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             +++ F+  +  C  +  L+ G Q+   A   G+ D+ +V ++L+ ++ RCG V  A+ 
Sbjct: 571 HSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYF 630

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            FD +  K+  +WN L+SG+  +    + L  F  + ++G E+N  TF   V       N
Sbjct: 631 AFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVAN 690

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMS 522
            ++  QIH  IIKTG  S   + + LI  Y   G +D++  +F    E+ ++ SW AM++
Sbjct: 691 VKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEI-SWNAMLT 749

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFV 575
                GH  +A+++F  + + G  P+      +L++C+ +G        +Q  + +H  V
Sbjct: 750 GYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLV 809

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K     E Y  + V+D   + G +  AR   ++     D +V  TL+ A   H  +   
Sbjct: 810 PK----PEHY--ACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNID-- 861

Query: 636 MEIFDKMKLANLQPS-QATFV 655
           +  F    L  L+P   AT+V
Sbjct: 862 IGEFAASHLLELEPKDSATYV 882



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 184/696 (26%), Positives = 327/696 (46%), Gaps = 12/696 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG I+K+GF  ++ L   L+ +Y   G     + VFDEM  R L  W  ++   + 
Sbjct: 87  GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY----SIHCFALKIRIEK 178
                  L ++  M      P+E     V++ C   G  +  +     IH   +    E 
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC---GGGDVPFHCVEKIHARTITHGYEN 203

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + FV   +++ Y K G + +A++VF  +   D   W AM+ G +  G   EA+ +   M 
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMH 263

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+    Y F + L  C+ V  + +G Q+HGL+++        + NAL+ +Y +     
Sbjct: 264 TSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFI 323

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A +VF  M  +D +S+N+L  G S+     +   LF K  L   +P+ VT + LL  C 
Sbjct: 324 PAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACS 383

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +  L +G Q    A+  G   +  +  +L+ ++ +C  ++ AH  F +   +N+  WN 
Sbjct: 384 SVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +L  Y       +  K F  +   G+E N  T+  ++ TC       +  QIH  ++KTG
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F    Y+ S LI  Y   G+LD++ +     +  D+ SW AM++         EA+ +F 
Sbjct: 504 FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFK 563

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            + + G   D     + +++CA I A  + + IH      G++ ++ V +A++  YA+CG
Sbjct: 564 EMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCG 623

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A  AFD+ F S D I +N+LI  +A  G   EA+ +F +M  A  + +  TF   +
Sbjct: 624 KVRDAYFAFDKIF-SKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAV 682

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SA ++   V  G  +  +M  + G     +    L+ + ++ G ++DA+     MP + +
Sbjct: 683 SAAANVANVKLGKQI-HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKN 740

Query: 719 PTVYRSLLSGCRIHGN--KELGEWASEKLLLLLPKN 752
              + ++L+G   HG+  K L  +   K L +LP +
Sbjct: 741 EISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNH 776



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 220/450 (48%), Gaps = 7/450 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + +A  LS   ++ + ++G Q H + +K G ++DI L+  L+ +Y KC       
Sbjct: 368 LKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAH 427

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F      N+V W +++ A       +   K++  M+  G  PN+F   S+++ C S+ 
Sbjct: 428 EFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLR 487

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A + G  IH   LK   + N +V   +++ YAKLG +  A ++F  +   DV  W AMI 
Sbjct: 488 AVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIA 547

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA      EALN+   M  +GI  D   F +A+  C+ +   + G+QIH     S    
Sbjct: 548 GYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSD 607

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +S+ NAL+ +Y +   +  A+  F+++  KD ISWN+L  GF+++ +  +  SLF +  
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMS 667

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            +G   N  TF   +     + ++ LG Q+  + +  G   E  V++ LI ++ +CG ++
Sbjct: 668 KAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNID 727

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F  +  KN  +WN +L+GY  +      L  F ++ + GV  N  TF  V+  C 
Sbjct: 728 DAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACS 787

Query: 460 RS-------ENQQMVGQIHGAIIKTGFSSC 482
                    +  Q + ++HG + K    +C
Sbjct: 788 HVGLVDEGIKYFQSMREVHGLVPKPEHYAC 817



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 157/598 (26%), Positives = 269/598 (44%), Gaps = 12/598 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   N      ++  C+S G    G+ +H   LK+       +   +++ Y   GD
Sbjct: 59  MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +  A  VF  +    + CWN ++  +         L +   ML E +  D+ T+   L+G
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG 178

Query: 256 CSL-VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           C      F    +IH   I    E S+ + N LID+Y K+  ++ A KVF+ +  +D +S
Sbjct: 179 CGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVS 238

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W  +  G S++    +   LF +   SG  P    FS +L  C K+    +G QL  L L
Sbjct: 239 WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVL 298

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             GF  E  V ++L+ ++ R G    A  VF+ +  ++  ++N L+SG          L+
Sbjct: 299 KQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALE 358

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSY 493
            F  +    ++ + C     + + C S    +VG Q H   IK G SS   +  +L+  Y
Sbjct: 359 LFKKMCLDCLKPD-CVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLY 417

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
           V    +  + EF    E  ++  W  M+ A     + +E+  IF  +   G +P+++   
Sbjct: 418 VKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYP 477

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +IL +C+++ A    + IH  V+K GF   VYV+S +ID YAK G +  A   F +    
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIF-RRLKE 536

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            DV+ +  +I  YA H   +EA+ +F +M+   +      F S +SAC+    +++G   
Sbjct: 537 KDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQG--- 593

Query: 674 FKSMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            + + +Q    G          LV + +R G + DA    + + F      + SL+SG
Sbjct: 594 -QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKI-FSKDNISWNSLISG 649



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 7/379 (1%)

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            +S ++      +  H     G R N  T+  LL  C        G +L    L  GF  
Sbjct: 42  AYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCA 101

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           E  +   L+ ++   G ++ A +VFD +  + ++ WN++L  +        VL  F  + 
Sbjct: 102 EVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRML 161

Query: 441 ESGVEVNGCTFFYVVETCCRSENQ-QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
           +  V+ +  T+  V+  C   +     V +IH   I  G+ +  ++C+ LI  Y   G L
Sbjct: 162 QEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFL 221

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +++ +  +G ++ D  SW AM+S L   G   EAV +F  +  +G  P  YI  ++L++C
Sbjct: 222 NSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
             +  Y+  + +H  V+K GF+ E YV +A++  Y++ G+   A   F+     ++V  Y
Sbjct: 282 TKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEV-SY 340

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG--LVDKGCLLFKSM 677
           N+LI   +  G   +A+E+F KM L  L+P   T  S++SACS  G  LV K    F S 
Sbjct: 341 NSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ---FHSY 397

Query: 678 DSQYGMQPSPDCYGCLVDM 696
             + GM       G L+D+
Sbjct: 398 AIKAGMSSDIILEGALLDL 416


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/743 (29%), Positives = 378/743 (50%), Gaps = 7/743 (0%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKS--LSLSEN-LKSRVL--GTQVHGHIVKLGFTND 78
           R  R CG ++    +  +  P    ++  ++L +N  + R+L    ++H  +V+ G   D
Sbjct: 2   RNERHCGPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPD 61

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           IFL N LI MY KC       +VF EM  R+++SW  ++S   Q G      +++ +M+ 
Sbjct: 62  IFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            GF+PN+    S++  C S    E G  IH   +K   +++P V  S+L+ Y K GD+  
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPR 181

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A +VF  IS  DV  +N M+G YA   Y  E L +   M  EGI+ DK T+IN L   + 
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
            +  D G++IH L +   +   I +  AL+ M ++   +D A + F+ +AD+DV+ +N L
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNAL 301

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
               +++ +  +    +++    G   N  T+  +L  C     L+ G  +       G 
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  + ++LI M+ RCG +  A  +F  +  +++ +WN +++GY       + ++ +  
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV+    TF +++  C  S        IH  I+++G  S G++ ++L+  Y   G 
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 481

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           L  +     G +  D+ SW +M++     G    A  +F  +     +PD     ++L+ 
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           C    A +  K IH  + + G   +V + +A+I+ Y +CG ++ AR  F  S    DV+ 
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF-HSLQHRDVMS 600

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSM 677
           +  +I   A  G   +A+E+F +M+    +P   +TF S++SAC+H GLV +G  +F SM
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSM 660

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
           +S+YG+ P+ + YGCLV +L R    ++A+ +I  MPF P   V+ +LL  CRIHGN  L
Sbjct: 661 ESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIAL 720

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
            E A+   L L  +N A ++LLS
Sbjct: 721 AEHAANNALKLNARNPAVYILLS 743



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/631 (24%), Positives = 290/631 (45%), Gaps = 12/631 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I+K G+  D  +QN+L++MY KCG      +VF  ++ R++VS+  ++    Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  L ++  M + G  P++    +++    +    + G  IH   ++  +  +  V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++    + GDV +A++ F  I+  DV  +NA+I   A  G+  EA      M  +G+
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +++ T+++ L  CS     + G+ IH  I        + I NALI MY +   +  A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M  +D+ISWN +  G++  ++ G+   L+ +    G +P  VTF  LL  C     
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G  +    L  G     ++ ++L+ M+ RCG++  A +VF+    +++ +WN +++G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +  +       K F  +    +E +  TF  V+  C   E  ++  QIHG I ++G    
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y+  G L ++    +  +  D+ SW AM+     QG + +A+ +F  +  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 543 AG-EKPDEYILGTILNSCAAIG----AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            G   PD     +IL++C   G     YQ   S+     + G    +     ++    + 
Sbjct: 627 EGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMES---EYGVLPTIEHYGCLVGLLGRA 683

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQATFVS 656
              + A    +Q     D  V+ TL+ A   HG ++ A    +  +KL    P  A ++ 
Sbjct: 684 RRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNP--AVYIL 741

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           + +  +  G  D    + + M+ + G++  P
Sbjct: 742 LSNVYAAAGRWDDVAKIRRVMEGR-GIRKEP 771


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/701 (31%), Positives = 371/701 (52%), Gaps = 8/701 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG I+  G   D +L N L+ +YS+ G   +  +VF++M ERNLV+W+ +VSA   +G 
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFV 182
           ++  L +++D  +T    PNE+ + S ++ C  +  S     + +  F +K R +++ +V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++FY K G++  A  VF ++       W  MI G    G  + +L +   ++   +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D Y     L  CS++   + G+QIH  I+R   E   S++N LID Y+K   +  A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M +K++ISW TL  G+ +N    +   LF      G +P+    S +L  C  L  
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+    +     ++  VT+SLI M+ +C  +  A  VFD  +  ++  +N ++ G
Sbjct: 366 LEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG 425

Query: 423 YCFNCCD---ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           Y          D L  F ++    +  +  TF  ++       +  +  QIHG + K G 
Sbjct: 426 YSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGL 485

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   +  S+LI  Y N   L +S    +  +  D+  W +M S  V Q  N EA+ +F  
Sbjct: 486 NLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE 545

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L  + ++PDE+    ++ +   + + Q  +  H  ++K G     Y+ +A++D YAKCG 
Sbjct: 546 LQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            + A  AFD S  S DV+ +N++I +YA+HG   +A+++ +KM    ++P+  TFV V+S
Sbjct: 606 PEDAHKAFD-SAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLS 664

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLV+ G   F+ M  ++G++P  + Y C+V +L R G L +A+ +IE MP +P+ 
Sbjct: 665 ACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAA 723

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+RSLLSGC   GN EL E+A+E  +L  PK+  +  LLS
Sbjct: 724 IVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLS 764



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H HI++ G   D  L N LI  Y KCG      ++FD M  +N++SWT ++S   Q
Sbjct: 268 GKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQ 327

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      ++++  M   G  P+ FA  S++  C S+ A EFG  +H + +K  +  + +V
Sbjct: 328 NSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYV 387

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE---ALNVVSSMLF 239
             S+++ YAK   +  A +VF   ++DDV  +NAMI GY+  G  +E   ALN+   M F
Sbjct: 388 TNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRF 447

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             I     TF++ L+  + +    + +QIHGL+ +  +   I   +ALI +Y     +  
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKD 507

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           +  VF+ M  KD++ WN++F G+ +     +  +LF +  LS  RP+  TF  ++   G 
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGN 567

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L LG +  C  L  G      +T++L+ M+ +CG+ E AH  FD+ + +++  WN +
Sbjct: 568 LASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +S Y  +      L+    +   G+E N  TF  V+  C
Sbjct: 628 ISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSAC 666



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/610 (23%), Positives = 276/610 (45%), Gaps = 4/610 (0%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R +  Q+   +VK  F  D+++   LI  Y K G   +   VFD + E++ V+WT ++S 
Sbjct: 164 RWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISG 223

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            ++ G   + L+++  +     +P+ + + +V+  C  +   E G  IH   L+   EK+
Sbjct: 224 CVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKD 283

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +   +++ Y K G V AA ++F  + + ++  W  ++ GY       EA+ + +SM  
Sbjct: 284 ASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPK 343

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  D +   + L  C+ +   + G Q+H   I++ +     + N+LIDMY K   +  
Sbjct: 344 FGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTE 403

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQ---TASLFHKFILSGSRPNHVTFSILLRQ 356
           A KVF+  A  DV+ +N +  G+S      +     ++FH       RP+ +TF  LLR 
Sbjct: 404 ARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
              L  L L  Q+  L    G   +    S+LI ++  C  ++ +  VFD +  K++  W
Sbjct: 464 SASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIW 523

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N + SGY     + + L  F  +  S    +  TF  +V       + Q+  + H  ++K
Sbjct: 524 NSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLK 583

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G     YI ++L+  Y   G  +++ +  + A   D+  W +++S+  + G   +A+ +
Sbjct: 584 RGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQM 643

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
              ++  G +P+      +L++C+  G  +        +++ G   E      ++    +
Sbjct: 644 LEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGR 703

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
            G +  AR   ++       IV+ +L+   A  G V E  E   +M + +      +F  
Sbjct: 704 AGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNV-ELAEYAAEMAILSDPKDSGSFTL 762

Query: 657 VMSACSHKGL 666
           + +  + KG+
Sbjct: 763 LSNIYASKGM 772



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 4/387 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D    +  L+   +L +   GTQVH + +K    ND ++ N+LI MY+KC       
Sbjct: 346 LKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEAR 405

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNG---EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +VFD  A  ++V +  ++    + G   E    L ++ DM+     P+     S+++   
Sbjct: 406 KVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S+ +      IH    K  +  + F G +++  Y+    +  +  VF  +   D+  WN+
Sbjct: 466 SLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           M  GY       EALN+   +       D++TF++ +     +A   +G++ H  +++  
Sbjct: 526 MFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRG 585

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +EC+  I NAL+DMY K    + A K F+  A +DV+ WN++   ++ +    +   +  
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLE 645

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           K +  G  PN++TF  +L  C     ++ GL+   L L  G   E      ++ +  R G
Sbjct: 646 KMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAG 705

Query: 397 AVEMAHSVFDNVSYKNIT-TWNELLSG 422
            +  A  + + +  K     W  LLSG
Sbjct: 706 RLNEARELIEKMPTKPAAIVWRSLLSG 732


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/737 (30%), Positives = 386/737 (52%), Gaps = 14/737 (1%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENL--------KSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           F S + L   P+     L  + +L        K+   G Q+H  ++K   +   FL   L
Sbjct: 28  FQSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALLLKSHLS--AFLATKL 85

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           + MY KCG     ++VFDEM+ER + SW  ++ A + +G++   +++Y DM+  G   + 
Sbjct: 86  VLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDA 145

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
               SV+K C ++G S  G  IH  A+K    +  FV  +++  Y K GD+  A  +F  
Sbjct: 146 CTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDG 205

Query: 206 I--SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
           I    +D   WN++I  +   G   EAL++   M   G+  + YTF+ ALQG    +   
Sbjct: 206 IMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVK 265

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G  IHG +++S     + + NALI MY K   M+ A +VFE M  +D +SWNTL  G  
Sbjct: 266 LGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLV 325

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +N+      + F     SG +P+ V+   L+   G+  +L  G ++   A+  G      
Sbjct: 326 QNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQ 385

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           + ++L+ M+ +C  V+     F+ +  K++ +W  +++GY  N    + +  F  +   G
Sbjct: 386 IGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKG 445

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           ++V+      V+  C   +++  + +IHG + K   +    + ++++  Y   G +D + 
Sbjct: 446 MDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGHIDYAR 504

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                    D+ SW +M++  VH G   EA+ +F+SL +   +PD   + + L++ A + 
Sbjct: 505 RAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLS 564

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           + ++ K IH F+I+ GF  E  +AS+++D YA CG ++ +R  F  S    D+I++ ++I
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMF-HSVKQRDLILWTSMI 623

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            A   HG  ++A+ +F KM   N+ P   TF++++ ACSH GL+ +G   F+ M   Y +
Sbjct: 624 NANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQL 683

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           +P P+ Y C+VD+LSR+  LE+A H +  MP +PS  ++ +LL  C IH NKELGE A++
Sbjct: 684 EPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAK 743

Query: 744 KLLLLLPKNDAAHVLLS 760
           +LL    +N   + L+S
Sbjct: 744 ELLQSDTENSGKYALIS 760


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/696 (29%), Positives = 364/696 (52%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  GF +   + N LI +YSK G+      VF+ +  ++ VSW  ++S   QNG
Sbjct: 133 QIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNG 192

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             D  + ++  M  +  +P  +   SV+  C  +   + G  +H F +K  +    FV  
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y++ G++ AAE++F  +   D   +N++I G A  G+   AL +   M  + +  
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKP 312

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V     G+Q+H  +I+  +   + I  +L+D+Y+K   ++ A + F
Sbjct: 313 DCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYF 372

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   + +  N  ++  +F +  + G  PN  T+  +LR C  L  LD
Sbjct: 373 LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALD 432

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +  GF     V S LI M+ + G ++ A  +   +  +++ +W  +++GY 
Sbjct: 433 LGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYT 492

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +   A+ LK F  +   G+  +   F   +  C   +      QIH     +G+S    
Sbjct: 493 QHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLS 552

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G+  +++      +  D  SW A++S     GH  EA+ +F  + +AG
Sbjct: 553 IGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAG 612

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            + + +  G+ +++ A     ++ K IH  +IK G+++E   ++ +I  Y+KCG I+ A+
Sbjct: 613 VEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAK 672

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N V+ +N +I  Y+ HG  SEA+ +F++MK   L P+  TFV V+SACSH 
Sbjct: 673 REFFEMPEKN-VVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHV 731

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   F+SM  ++G+ P P+ Y C+VD+L R   L  A+  IE MP +P   ++R+
Sbjct: 732 GLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRT 791

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N E+GE+A+  LL L P++ A +VLLS
Sbjct: 792 LLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLS 827



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 175/634 (27%), Positives = 319/634 (50%), Gaps = 24/634 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS    ++   LG Q+HG IVK G +++ F+ N L+ +YS+ G      ++F 
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ +S+  ++S   Q G  D  L+++  M+ +   P+   V S++  C S+GA   
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + +K+ +  +  +  S+L+ Y K  D+  A   F +  +++V  WN M+  Y  
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   E+  +   M  EG+  ++YT+ + L+ C+ +   D+G QIH  +I+S  + ++ +
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A  + +R+ ++DV+SW  +  G++++    +   LF +    G 
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R +++ FS  +  C  +  L+ G Q+   +   G+ ++ ++ ++L+ ++ RCG  + A+ 
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYL 572

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ +  K+  +WN L+SG+  +    + L+ F  + ++GVE N  TF   V     + N
Sbjct: 573 AFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTAN 632

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG+ S     + LI  Y   G + D   EF    E+ ++ SW AM++
Sbjct: 633 IKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMIT 691

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG------AYQRTKSI-HPFV 575
                G+  EAV++F  + + G  P+      +L++C+ +G      +Y R+ S  H  V
Sbjct: 692 GYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLV 751

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K     E YV   V+D   +   +  AR   ++     D +++ TL+ A   H    + 
Sbjct: 752 PK----PEHYV--CVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVH----KN 801

Query: 636 MEI--FDKMKLANLQPS-QATFV--SVMSACSHK 664
           +EI  F    L  L+P   AT+V  S M A S K
Sbjct: 802 IEIGEFAARHLLELEPEDSATYVLLSNMYAVSGK 835



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 177/680 (26%), Positives = 318/680 (46%), Gaps = 6/680 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N  S +   ++H  I K GF  +  L + LI +Y   G     +++FD++   N+  W  
Sbjct: 22  NSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNK 81

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALK 173
           ++S  +        L ++  M T    P+E    SV++ C S G + F  +  IH   + 
Sbjct: 82  VISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRAC-SGGKAPFQVTEQIHAKIIH 140

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
                +P V   +++ Y+K G V  A+ VF  +   D   W AMI G +  G   EA+ +
Sbjct: 141 HGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILL 200

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M    +    Y F + L  C+ +  F +G Q+HG I++  +     + NAL+ +Y +
Sbjct: 201 FCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSR 260

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  A ++F +M  +D IS+N+L  G ++     +   LF K  L   +P+ VT + L
Sbjct: 261 WGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASL 320

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  +     G QL    +  G   +  +  SL+ ++ +C  +E AH  F     +N+
Sbjct: 321 LSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENV 380

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             WN +L  Y      ++    F  +   G+  N  T+  ++ TC       +  QIH  
Sbjct: 381 VLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQ 440

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +IK+GF    Y+CS LI  Y   G+LD +          D+ SW AM++         EA
Sbjct: 441 VIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEA 500

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  +   G + D     + +++CA I A  + + IH      G++ ++ + +A++  
Sbjct: 501 LKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSL 560

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YA+CG  + A +AF++  ++ D I +N LI  +A  G   EA+++F +M  A ++ +  T
Sbjct: 561 YARCGRAQDAYLAFEK-IDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFT 619

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F S +SA ++   + +G  +  +M  + G     +    L+ + S+ G +EDAK     M
Sbjct: 620 FGSAVSATANTANIKQGKQI-HAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEM 678

Query: 714 PFQPSPTVYRSLLSGCRIHG 733
           P + +   + ++++G   HG
Sbjct: 679 P-EKNVVSWNAMITGYSQHG 697



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 274/595 (46%), Gaps = 6/595 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   N      + + C + G+      +H    K   +    +G  +++ Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           V  A ++F  I S +V  WN +I G        + L + S M+ E +T D+ TF + L+ 
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 256 CSL-VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           CS   A F +  QIH  II      S  + N LID+Y K+  +D A  VFER+  KD +S
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W  +  G S+N    +   LF +   S   P    FS +L  C K+    LG QL    +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   E  V ++L+ ++ R G +  A  +F  +  ++  ++N L+SG          L+
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  +    ++ +  T   ++  C          Q+H  +IK G SS   I  SL+  YV
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYV 360

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
               ++ + E+    E  ++  W  M+ A    G+  E+  IF  +   G  P++Y   +
Sbjct: 361 KCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPS 420

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           IL +C ++GA    + IH  VIK GF   VYV S +ID YAK G++  AR    Q     
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTAR-GILQRLREE 479

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           DV+ +  +I  Y  H L +EA+++F +M+   ++     F S +SAC+    +++G  + 
Sbjct: 480 DVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIH 539

Query: 675 -KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            +S  S Y    S      LV + +R G  +DA    E +  + + + + +L+SG
Sbjct: 540 AQSYISGYSEDLSIG--NALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALISG 591



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 209/419 (49%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + +A  LS   ++ +   G Q+H +++K+G ++D+ ++ +L+ +Y KC       
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F      N+V W +++ A  Q G       +++ M+  G MPN++   S+++ C S+G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A + G  IH   +K   + N +V   +++ YAK G++  A  +   +  +DV  W AMI 
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       EAL +   M  +GI  D   F +A+  C+ +   + G+QIH     S    
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +SI NAL+ +Y +      A+  FE++  KD ISWN L  GF+++ +  +   +F +  
Sbjct: 550 DLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMN 609

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            +G   N  TF   +       ++  G Q+  + +  G+  E   ++ LI ++ +CG++E
Sbjct: 610 QAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIE 669

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A   F  +  KN+ +WN +++GY  +   ++ +  F  + + G+  N  TF  V+  C
Sbjct: 670 DAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSAC 728



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 14/296 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D I  + ++S    +++   G Q+H      G++ D+ + N L+++Y++CG      
Sbjct: 512 IRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAY 571

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+++  ++ +SW  ++S   Q+G  +  L+++  M   G   N F  GS +    +  
Sbjct: 572 LAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTA 631

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH   +K   +        ++  Y+K G +  A+R F+ +   +V  WNAMI 
Sbjct: 632 NIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMIT 691

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGLI 272
           GY+  GYG EA+++   M   G+  +  TF+  L  CS V   + G        + HGL+
Sbjct: 692 GYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLV 751

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
            + E    +      +D+  +++ +  A +  E M  + D + W TL    + +KN
Sbjct: 752 PKPEHYVCV------VDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKN 801


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/725 (30%), Positives = 367/725 (50%), Gaps = 12/725 (1%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           + P  +  +L+     +S   G  +H H++K G        N+L+ +YS+C        V
Sbjct: 2   RTPETIGSALARFGTSRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAV 59

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FDE+ +   VSW+ +V+A   NG     L  +  M+  G   NEFA+  V+K    +   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV--- 116

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI----SSDDVGCWNAM 217
            FG  +H  A+  R+  + FV  +++  Y   G V  A R+F          +   WN M
Sbjct: 117 RFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTM 176

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  Y       +A+ V   M++ G   +++ F   +  C+   D + GRQ+HG ++R+  
Sbjct: 177 ISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGY 236

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E  +   NAL+DMY K   ++ A  VFE+M   DV+SWN    G   + +  +   L  +
Sbjct: 237 EKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQ 296

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              SG  PN  T S +L+ C      +LG Q+    +      +E V   L+ M+ + G 
Sbjct: 297 MKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGF 356

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE--VNGCTFFYVV 455
           ++ A  VFD +  +++  WN L+SG   +    +VL  F  + + G++  VN  T   V+
Sbjct: 357 LDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVL 416

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           ++   SE      Q+H    K G  S  ++ + LI SY   GQLD + +    +   D+ 
Sbjct: 417 KSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDII 476

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           S   MM+AL    H  +A+ +F  ++  G +PD ++L ++LN+C ++ AY++ K +H  +
Sbjct: 477 SSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           IK  F ++V+  +A++ AYAKCG I+ A MAF        ++ ++ +I   A HG    A
Sbjct: 537 IKRQFTSDVFAGNALVYAYAKCGSIEDADMAF-SGLPERGIVSWSAMIGGLAQHGHGKRA 595

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++F +M    + P+  T  SV+SAC+H GLVD     F+SM   +G+  + + Y C++D
Sbjct: 596 LDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMID 655

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +L R G LEDA  ++  MPFQ +  V+ +LL   R+H + ELG  A+EKL  L P+    
Sbjct: 656 ILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGT 715

Query: 756 HVLLS 760
           HVLL+
Sbjct: 716 HVLLA 720



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 173/638 (27%), Positives = 296/638 (46%), Gaps = 19/638 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM----AERNLVSWTLIV 117
            G QVH   V     +D+F+ N L+A+Y   G      R+FDE      ERN VSW  ++
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           SA ++N +    + ++ +M  +G  PNEF    V+  C      E G  +H   ++   E
Sbjct: 178 SAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYE 237

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           K+ F   ++++ Y+KLGD+  A  VF  + + DV  WNA I G    G+   AL ++  M
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM 297

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  + +T  + L+ C+    F++GRQIHG ++++  +    +   L+DMY K   +
Sbjct: 298 KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFL 357

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG--SRPNHVTFSILLR 355
           D A KVF+ M  +D+I WN L  G S +   G+  SLFH+    G     N  T + +L+
Sbjct: 358 DDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLK 417

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
                  +    Q+  LA   G L + +V + LI  + +CG ++ A  VF      +I +
Sbjct: 418 STASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIIS 477

Query: 416 WNELLSGYCFNCCD--ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
              +++    + CD   D +K F  +   G+E +      ++  C      +   Q+H  
Sbjct: 478 STTMMT--ALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAH 535

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           +IK  F+S  +  ++L+ +Y   G + D    FS   ER  + SW AM+  L   GH   
Sbjct: 536 LIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPER-GIVSWSAMIGGLAQHGHGKR 594

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVI 591
           A+ +FH +++ G  P+   L ++L++C   G     K          G +      + +I
Sbjct: 595 ALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMI 654

Query: 592 DAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           D   + G ++ A  +  +  F +N   V+  L+ A   H      +      KL  L+P 
Sbjct: 655 DILGRAGKLEDAMELVNNMPFQAN-AAVWGALLGASRVHR--DPELGRMAAEKLFTLEPE 711

Query: 651 QA-TFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQPS 686
           ++ T V + +  +  G+ D+   + K M DS    +P+
Sbjct: 712 KSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPA 749



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 8/186 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D   L+  L+   +L +   G QVH H++K  FT+D+F  N L+  Y+KCG      
Sbjct: 506 LEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDAD 565

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ER +VSW+ ++    Q+G     L ++  M   G  PN   + SV+  C   G
Sbjct: 566 MAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAG 625

Query: 160 ----ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
               A ++  S+   F +  R E++      +L    KL D  A E V       +   W
Sbjct: 626 LVDDAKKYFESMKETFGID-RTEEHYACMIDILGRAGKLED--AMELVNNMPFQANAAVW 682

Query: 215 NAMIGG 220
            A++G 
Sbjct: 683 GALLGA 688


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/691 (29%), Positives = 367/691 (53%), Gaps = 3/691 (0%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           KLG   D      +I      G       +F +M   N+V+W +++S  ++ G     + 
Sbjct: 276 KLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAID 335

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
            + +M   G       +GSV+    S+ A  +G  +H  A+K  +  N +VG S++N YA
Sbjct: 336 FFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYA 395

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K   + AA++VF ++   ++  WNAM+GGYA  GY  + + + S M   G   D++T+ +
Sbjct: 396 KCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTS 455

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C+ +   ++GRQ+H  II+   E ++ + N L+DMY K   ++ A + FE + ++D
Sbjct: 456 ILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRD 515

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            +SWN +  G+ + ++  +  ++F + IL G  P+ V+ + +L  C  L  L+ G Q+ C
Sbjct: 516 NVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHC 575

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +  G        SSLI M+ +CGA+E A  VF  +  +++ + N +++GY  N    +
Sbjct: 576 FLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VE 634

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLI 490
            +  F  +   G+  +  TF  +++ C       +  QIH  I K G    G ++  SL+
Sbjct: 635 AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLL 694

Query: 491 KSYVNFG-QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
             Y+N   + D    FS          W A++S     G + EA+ ++  +     +PD+
Sbjct: 695 VMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQ 754

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
               ++L +C+ + +    + IH  +  +G +++    SAV+D YAKCGD+K +   F++
Sbjct: 755 ATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEE 814

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             + NDVI +N++I+ +A +G    A++IFD+MK   ++P   TF+ V++ACSH G V +
Sbjct: 815 MGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSE 874

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +F  M   Y + P  D   C++D+L R G+L++A+  I+ + F+P+  ++ +LL  C
Sbjct: 875 GREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGAC 934

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHG+   G  A+EKL+ L P+N + +VLLS
Sbjct: 935 RIHGDDIRGRRAAEKLIELEPENSSPYVLLS 965



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 181/701 (25%), Positives = 314/701 (44%), Gaps = 72/701 (10%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K GF +   L + ++ +Y+KCG   +  + F+++ +R++++W  ++S   + G 
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +  +  +  ++  G  PN+F    V+  C  +   + G  +HC  +K+  E N F   S
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K G +  A ++F ++   D   W AMI GY   G   EAL V   M   G+  D
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +  F+  +  C       +GR                              +D A  +F 
Sbjct: 283 QVAFVTVITAC-----VGLGR------------------------------LDDACDLFV 307

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           +M + +V++WN +  G  +     +    F     +G +    T   +L     L  L+ 
Sbjct: 308 QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNY 367

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           GL +   A+  G      V SSLI M+ +C  +E A  VFD +  +N+  WN +L GY  
Sbjct: 368 GLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ 427

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N   + V+K F  +   G   +  T+  ++  C   E  +M  Q+H  IIK  F    ++
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFV 487

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y   G L+ + +        D  SW A++   V +    EA  +F  ++  G 
Sbjct: 488 ENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGI 547

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            PDE  L +IL+ CA + A ++ + +H F++K G  T +Y  S++ID Y KCG I+ AR 
Sbjct: 548 APDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARY 607

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS--- 662
            F     S  V+  N +I  YA + LV EA+++F +M+   L PS+ TF S++ AC+   
Sbjct: 608 VF-SCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPY 665

Query: 663 -------------HKGLVDKG-----CLLFKSMDSQ-----------YGMQPSPDCYGCL 693
                         +GL+  G      LL   M+SQ           +    S   +  +
Sbjct: 666 KLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAI 725

Query: 694 VDMLSRNGYLEDAKHVIEIM---PFQPSPTVYRSLLSGCRI 731
           +   ++NG  E+A  + + M     +P    + S+L  C I
Sbjct: 726 ISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSI 766



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 170/653 (26%), Positives = 305/653 (46%), Gaps = 9/653 (1%)

Query: 47   LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            L   LS   +L++   G  VH   +K G  +++++ ++LI MY+KC       +VFD + 
Sbjct: 352  LGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD 411

Query: 107  ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ERNLV W  ++    QNG     +K++ +M+  GF P+EF   S++  C  +   E G  
Sbjct: 412  ERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQ 471

Query: 167  IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
            +H F +K   E N FV  ++++ YAK G +  A + F  I + D   WNA+I GY     
Sbjct: 472  LHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEED 531

Query: 227  GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
              EA N+   M+ +GI  D+ +  + L GC+ +   + G Q+H  +++S ++  +   ++
Sbjct: 532  EDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSS 591

Query: 287  LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
            LIDMY+K   ++ A  VF  M  + V+S N +  G+++N +  +   LF +    G  P+
Sbjct: 592  LIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPS 650

Query: 347  HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
             +TF+ LL  C     L+LG Q+ CL    G L D + +  SL+ M+        A  +F
Sbjct: 651  EITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILF 710

Query: 406  DNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
                Y K+   W  ++SG+  N C  + L+ +  +  +    +  TF  V+  C    + 
Sbjct: 711  SEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASL 770

Query: 465  QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
                 IH  I   G  S     S+++  Y   G + +S + F     + D+ SW +M+  
Sbjct: 771  GDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVG 830

Query: 524  LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNT 582
                G+   A+ IF  +     +PD+     +L +C+  G     + I   ++       
Sbjct: 831  FAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVP 890

Query: 583  EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             +   + +ID   + G +K A    D+     + +++ TL+ A   HG         +  
Sbjct: 891  RLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAE-- 948

Query: 643  KLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
            KL  L+P  ++ +V + +  +  G  D+   + ++M  + G++  P C   +V
Sbjct: 949  KLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAM-REKGLRKLPGCSWIVV 1000



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 165/677 (24%), Positives = 316/677 (46%), Gaps = 40/677 (5%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  ++K+GF  + F + +LI MYSKCG      ++FD + + + VSWT +++  +
Sbjct: 200 LGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYV 259

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G  +  LK++ DM+  G +P++ A  +V+  CV +G                      
Sbjct: 260 QVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLG---------------------- 297

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
                     +L D   A  +F  + + +V  WN MI G+   G   EA++   +M   G
Sbjct: 298 ----------RLDD---ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTG 344

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +   + T  + L   + +   + G  +H   I+  +  ++ + ++LI+MY K   M+ A 
Sbjct: 345 VKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAK 404

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF+ + +++++ WN + GG+++N    +   LF +    G  P+  T++ +L  C  L 
Sbjct: 405 KVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLE 464

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L++G QL    +   F     V ++L+ M+ +CGA+E A   F+ +  ++  +WN ++ 
Sbjct: 465 CLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIV 524

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY     + +    F  +   G+  +  +   ++  C   +  +   Q+H  ++K+G  +
Sbjct: 525 GYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQT 584

Query: 482 CGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           C Y  SSLI  YV  G ++ + + FS    R  + S  A+++    Q    EA+ +F  +
Sbjct: 585 CLYAGSSLIDMYVKCGAIEAARYVFSCMPSR-SVVSMNAIIAGYA-QNDLVEAIDLFQEM 642

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVASAVIDAYAKCGD 599
              G  P E    ++L++C         + IH  + K G   +  ++  +++  Y     
Sbjct: 643 QNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQR 702

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
              A + F +       I++  +I  +  +G   EA++++ +M   N +P QATF SV+ 
Sbjct: 703 KTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLR 762

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACS    +  G ++  S+    G+         +VDM ++ G ++ +  V E M  +   
Sbjct: 763 ACSILASLGDGRMI-HSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDV 821

Query: 720 TVYRSLLSGCRIHGNKE 736
             + S++ G   +G  E
Sbjct: 822 ISWNSMIVGFAKNGYAE 838



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 260/559 (46%), Gaps = 45/559 (8%)

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           AS    +IH   LK        +G ++++ YAK G+V  A + F  +   D+  WN+++ 
Sbjct: 96  ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLS 155

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y+  G   + +    S+   G++ +++T+   L  C+ + D D+G+Q+H  +I+   E 
Sbjct: 156 MYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +     +LIDMY K   +  A K+F+ + D D +SW  +  G+ +   P +   +F    
Sbjct: 216 NSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQ 275

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G  P+ V F  ++  C       +GL         G LD+                  
Sbjct: 276 KLGLVPDQVAFVTVITAC-------VGL---------GRLDD------------------ 301

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +F  +   N+  WN ++SG+    CD + +  F N+W++GV+    T   V+    
Sbjct: 302 -ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIA 360

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             E       +H   IK G +S  Y+ SSLI  Y    +++ + +  +  +  ++  W A
Sbjct: 361 SLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNA 420

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+      G+  + + +F  +   G  PDE+   +IL++CA +   +  + +H F+IK  
Sbjct: 421 MLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN 480

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F   ++V + ++D YAKCG ++ AR  F +   + D + +N +I+ Y       EA  +F
Sbjct: 481 FEYNLFVENTLVDMYAKCGALEEARQQF-EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMF 539

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVD 695
            +M L  + P + +  S++S C++   +++G    C L KS     G+Q        L+D
Sbjct: 540 RRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-----GLQTCLYAGSSLID 594

Query: 696 MLSRNGYLEDAKHVIEIMP 714
           M  + G +E A++V   MP
Sbjct: 595 MYVKCGAIEAARYVFSCMP 613



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 177/387 (45%), Gaps = 7/387 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA  LS   NL++   G QVH  +VK G    ++  ++LI MY KCG       VF
Sbjct: 550 DEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVF 609

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R++VS   I++   QN +    + ++ +M+  G  P+E    S++  C       
Sbjct: 610 SCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLN 668

Query: 163 FGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            G  IHC   K   +    F+G S+L  Y        A+ +F           W A+I G
Sbjct: 669 LGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISG 728

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +   G   EAL +   M       D+ TF + L+ CS++A    GR IH LI    ++  
Sbjct: 729 HTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSD 788

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFI 339
               +A++DMY K   M  + +VFE M  K DVISWN++  GF++N        +F +  
Sbjct: 789 ELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMK 848

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-GFLDEENVTSSLIYMFCRCGAV 398
            +  RP+ VTF  +L  C     +  G ++  + +H    +   +  + +I +  R G +
Sbjct: 849 HTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFL 908

Query: 399 EMAHSVFDNVSYK-NITTWNELLSGYC 424
           + A    D ++++ N   W  LL G C
Sbjct: 909 KEAEEFIDKLNFEPNAMIWATLL-GAC 934



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 93/169 (55%), Gaps = 11/169 (6%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A + +K+IH   +K GF ++  + SA++D YAKCG+++ A  AF+Q     D++ +N+++
Sbjct: 96  ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQ-LEKRDILAWNSVL 154

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDS 679
             Y+  G + + +  F  ++   + P+Q T+  V+S+C+    +D G    C + K    
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK---- 210

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             G + +  C G L+DM S+ G L DA+ + + +   P    + ++++G
Sbjct: 211 -MGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAG 257



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  L     L S   G  +H  I  +G  +D    + ++ MY+KCG     ++
Sbjct: 751 RPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQ 810

Query: 101 VFDEMAERN-LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---- 155
           VF+EM  +N ++SW  ++    +NG  +  LK++ +MK     P++     V+  C    
Sbjct: 811 VFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAG 870

Query: 156 -VSMGASEFGYSIHCFALKIRIE 177
            VS G   F   +H + +  R++
Sbjct: 871 RVSEGREIFDIMVHSYKIVPRLD 893


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/740 (30%), Positives = 382/740 (51%), Gaps = 14/740 (1%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENL--------KSRVLGTQVHGHIVKLGFTNDIFLQ 82
           N  F S + L   P+     L  + +L        K+   G Q+H  ++K   +   FL 
Sbjct: 25  NPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLS--AFLA 82

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
             L+ MY KCG     ++VFDEM ER + +W  ++ A + +G++   +++Y +M+  G  
Sbjct: 83  TKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVA 142

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            +     SV+K C ++G S  G  IH  A+K    +  FV  +++  Y K GD+  A  +
Sbjct: 143 IDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVL 202

Query: 203 FYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           F  I    +D   WN++I  +   G   EAL++   M   G+  + YTF+ ALQG    +
Sbjct: 203 FDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPS 262

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
              +G  IHG  ++S     + + NALI MY K   M+ A +VF  M  +D +SWNTL  
Sbjct: 263 FVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLS 322

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G  +N+      + F     S  +P+ V+   L+   G+  +L  G ++   A+  G   
Sbjct: 323 GLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDS 382

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              + ++LI M+ +C  V+     F+ +  K++ +W  +++GY  N C  + +  F  + 
Sbjct: 383 NMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQ 442

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G++V+      V+  C   +++  + +IHG + K   +    + ++++  Y   G  D
Sbjct: 443 VKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGEVGHRD 501

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +          D+ SW +M++  VH G   EA+ +F+SL +   +PD   + + L++ A
Sbjct: 502 YARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATA 561

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + + ++ K IH F+I+ GF  E  +AS+++D YA CG ++ +R  F  S    D+I++ 
Sbjct: 562 NLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMF-HSVKQRDLILWT 620

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           ++I A   HG  +EA+ +F KM   N+ P   TF++++ ACSH GL+ +G   F+ M   
Sbjct: 621 SMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYG 680

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y ++P P+ Y C+VD+LSR+  LE+A   +  MP +PS  V+ +LL  C IH NKELGE 
Sbjct: 681 YQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGEL 740

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
           A+++LL    KN   + L+S
Sbjct: 741 AAKELLQSDTKNSGKYALIS 760


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/737 (29%), Positives = 385/737 (52%), Gaps = 34/737 (4%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----------------------- 92
           NLK+   G QVH  ++  GF   I++ N L+  Y K                        
Sbjct: 18  NLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMPQRDVISWNT 77

Query: 93  --------GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
                   G  G+   +FD M ER++VSW  ++S  + NG     ++++V M++   +P+
Sbjct: 78  LIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLK-IPH 136

Query: 145 EFAVGSV-MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           ++A  +V +K C  +     G  +HC A+++  E +   G ++++ Y+K   +  A RVF
Sbjct: 137 DYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVF 196

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   ++ CW+A+I GY       E L +   ML  G+ + + T+ +  + C+ ++ F 
Sbjct: 197 REMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFK 256

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G Q+HG  ++S+      I  A +DMY K   M  A+KVF  + +    S+N +  G++
Sbjct: 257 LGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYA 316

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
                 +   +F     +    + ++ S  L  C  +     G+QL  LA+ CG      
Sbjct: 317 RQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNIC 376

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++++ M+ +CGA+  A  +F+ +  ++  +WN +++ +  N      L  F ++  S 
Sbjct: 377 VANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRST 436

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           +E +  T+  VV+ C   +      +IHG IIK+G     ++ S+L+  Y   G L  + 
Sbjct: 437 MEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAE 496

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +     E     SW +++S    Q  +  A   F  ++E G  PD Y   T+L+ CA + 
Sbjct: 497 KIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMA 556

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             +  K IH  ++KL  +++VY+AS ++D Y+KCG+++ +R+ F+++    D + ++ +I
Sbjct: 557 TIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKA-PKRDYVTWSAMI 615

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            AYA+HGL  +A+ +F++M+L N++P+   F+SV+ AC+H G VDKG   F+ M S YG+
Sbjct: 616 CAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGL 675

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P  + Y C+VD+L R+G + +A  +IE MPF+    ++R+LLS C++ GN E+ E A  
Sbjct: 676 DPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFN 735

Query: 744 KLLLLLPKNDAAHVLLS 760
            LL L P++ +A+VLL+
Sbjct: 736 SLLQLDPQDSSAYVLLA 752



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 248/514 (48%), Gaps = 34/514 (6%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K TF + LQ CS +   + G+Q+H  +I +    +I + N L+  Y KSS M+YAFKVF+
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKF--------------------------- 338
           RM  +DVISWNTL  G++   N G   SLF                              
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 339 ---ILSGSRP-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
              + S   P ++ TF+++L+ C  + D  LGLQ+ CLA+  GF ++    S+L+ M+ +
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           C  ++ A  VF  +  +N+  W+ +++GY  N    + LK F ++ + G+ V+  T+  V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             +C      ++  Q+HG  +K+ F+    I ++ +  Y    ++ ++++  N       
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR 305

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            S+ A++     Q    +A+ IF SL       DE  L   L +C+ I  +     +H  
Sbjct: 306 QSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGL 365

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            +K G    + VA+ ++D Y KCG +  A + F++     D + +N +I A+  +  + +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALMEACLIFEE-MERRDAVSWNAIIAAHEQNEEIVK 424

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
            + +F  M  + ++P   T+ SV+ AC+ +  ++ G  +   +  + GM         LV
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRI-IKSGMGLDWFVGSALV 483

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           DM  + G L +A+ +   +  + +   + S++SG
Sbjct: 484 DMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISG 516



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 191/381 (50%), Gaps = 2/381 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L+ +L+    +K  + G Q+HG  VK G   +I + N ++ MY KCG       +F
Sbjct: 339 DEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIF 398

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +EM  R+ VSW  I++A  QN E    L ++V M  +   P++F  GSV+K C    A  
Sbjct: 399 EEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALN 458

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           +G  IH   +K  +  + FVG ++++ Y K G +  AE++   +       WN++I G++
Sbjct: 459 YGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFS 518

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                  A    S ML  GI  D YT+   L  C+ +A  ++G+QIH  I++ ++   + 
Sbjct: 519 SQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVY 578

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           I + L+DMY K   M  +  +FE+   +D ++W+ +   ++ +    +  +LF +  L  
Sbjct: 579 IASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLN 638

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            +PNH  F  +LR C  +  +D GL   Q +  H G   +    S ++ +  R G V  A
Sbjct: 639 VKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEA 698

Query: 402 HSVFDNVSYK-NITTWNELLS 421
             + +++ ++ +   W  LLS
Sbjct: 699 LKLIESMPFEADDVIWRTLLS 719


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/736 (28%), Positives = 377/736 (51%), Gaps = 32/736 (4%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----------------------- 92
           NLK+   G Q H  I   GF   +F+ N L+  Y KC                       
Sbjct: 50  NLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNT 109

Query: 93  ---GYFGWGLR-----VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
              GY G G       +FD M ER++VSW  ++S  +QNG     ++++  M+      +
Sbjct: 110 MIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHD 169

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
                 V+K C  +     G  +HC A+++  + +   G ++++ Y+    +  A  +F 
Sbjct: 170 YATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFC 229

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +   +  CW+A+I GY       E L +   ML EG+ + + TF +A + C+ ++ F++
Sbjct: 230 EMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFEL 289

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G Q+H   +++       +  A +DMY K   M  A KVF    +    S N L  G++ 
Sbjct: 290 GTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYAR 349

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
                +   +F     S    + ++ S  L  C  +     G+QL  LA+ CG      V
Sbjct: 350 QDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICV 409

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++++ M+ +CGA+  A  +FD++  K+  +WN +++ +  N    + L  F ++  S +
Sbjct: 410 ANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTM 469

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           E +  TF  VV+ C   +      ++HG +IK+G     ++ S++I  Y   G L  + +
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                E     SW +++S    +     A++ F  +++ G  PD +   T+L+ CA +  
Sbjct: 530 IHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLAT 589

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +  K IH  ++KL  +++VY+AS ++D Y+KCG+++ +R+ F+++    D + ++ +I 
Sbjct: 590 VELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKA-PKRDYVTWSAMIC 648

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           AYA+HGL  +A+++F++M+L N++P+   F+SV+ AC+H G VDKG   F+ M S YG+ 
Sbjct: 649 AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLD 708

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
           P  + Y C+VD+L R+G + +A  +IE MPF+    ++R+LL  CR+ GN E+ E A+  
Sbjct: 709 PQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANS 768

Query: 745 LLLLLPKNDAAHVLLS 760
           LL L P++ +A+VLLS
Sbjct: 769 LLQLDPQDSSAYVLLS 784



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 298/634 (47%), Gaps = 13/634 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH   +++GF +D+     L+ MYS C        +F EM ERN V W+ +++  +
Sbjct: 188 LGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYV 247

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N  F  GLK+Y  M   G   ++    S  + C  + A E G  +H +ALK     +  
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI 307

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG + L+ YAK   +  A +VF +  +      NA+I GYA      EAL +  S+    
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ +   AL  CS +  +  G Q+HGL ++  ++ +I + N ++DMY K   +  A 
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEAC 427

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ M  KD +SWN +     +N++  +T +LF   + S   P+  TF  +++ C    
Sbjct: 428 LIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKK 487

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G+++    +  G   +  V S++I M+C+CG +  A  + + +  +   +WN ++S
Sbjct: 488 ALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIIS 547

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+       + L  F  + + GV  +  T+  V++ C      ++  QIHG I+K    S
Sbjct: 548 GFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHS 607

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             YI S+++  Y   G + +S      A + D  +W AM+ A  + G   +A+ +F  + 
Sbjct: 608 DVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQ 667

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDAYAKCG 598
               KP+  I  ++L +CA +G     K +H F       G + ++   S ++D   + G
Sbjct: 668 LQNVKPNHTIFISVLRACAHMGFVD--KGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSG 725

Query: 599 DIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV-- 655
            +  A  +     F ++DVI + TL+      G V  A +  + +   + Q S A  +  
Sbjct: 726 QVNEALELIESMPFEADDVI-WRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLS 784

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +V +     G V K     +S    Y ++  P C
Sbjct: 785 NVYAIAGMWGEVAK----IRSFMKNYKLKKEPGC 814



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 3/389 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S+L  D I L+ +L+    +K  + G Q+HG  VK G   +I + N ++ MY+KCG    
Sbjct: 366 SYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALME 425

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +FD+M  ++ VSW  I++A  QN   +  L ++V M  +   P+++  GSV+K C  
Sbjct: 426 ACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAG 485

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
             A  +G  +H   +K  +  + FVG ++++ Y K G +  AE++   +       WN++
Sbjct: 486 KKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSI 545

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G++    G  AL+  S ML  G+  D +T+   L  C+ +A  ++G+QIHG I++ ++
Sbjct: 546 ISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQL 605

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              + I + ++DMY K   M  +  +FE+   +D ++W+ +   ++ +        LF +
Sbjct: 606 HSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEE 665

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCG 396
             L   +PNH  F  +LR C  +  +D GL   + +  H G   +    S ++ +  R G
Sbjct: 666 MQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSG 725

Query: 397 AVEMAHSVFDNVSYK-NITTWNELLSGYC 424
            V  A  + +++ ++ +   W  LL G C
Sbjct: 726 QVNEALELIESMPFEADDVIWRTLL-GIC 753



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/514 (25%), Positives = 240/514 (46%), Gaps = 34/514 (6%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K TF +  Q CS +   + G+Q H  I  +    ++ + N L+  Y K   ++YAF VF+
Sbjct: 38  KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97

Query: 306 RMADKDVISWNTLFGGFS-------------------------------ENKNPGQTASL 334
           +M  +DVISWNT+  G++                               +N    ++  +
Sbjct: 98  KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F K  L   + ++ TF+++L+ C  + D  LGLQ+ CLA+  GF  +    ++L+ M+  
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           C  ++ A ++F  +  +N   W+ +++GY  N    + LK +  + + G+ V+  TF   
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             +C      ++  Q+H   +KT F     + ++ +  Y    ++ ++ +  N       
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTR 337

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            S  A++     Q    EA+ IF SL ++    DE  L   L +C+AI  Y     +H  
Sbjct: 338 QSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGL 397

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            +K G +  + VA+ ++D YAKCG +  A + FD      D + +N +I A+  +  V E
Sbjct: 398 AVKCGLDFNICVANTILDMYAKCGALMEACLIFD-DMEIKDAVSWNAIIAAHEQNEHVEE 456

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
            + +F  M  + ++P   TF SV+ AC+ K  ++ G  +   +  + GM         ++
Sbjct: 457 TLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRV-IKSGMGLDWFVGSAII 515

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           DM  + G L +A+ + E +  + +   + S++SG
Sbjct: 516 DMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISG 548


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/691 (29%), Positives = 366/691 (52%), Gaps = 3/691 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
             +V   + ++G   D      ++  Y   G      ++F ++   N+V+W +++S   +
Sbjct: 227 AVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAK 286

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  +  +  ++++K  G      ++GSV+    S+    +G  +H  A K  ++ N +V
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYV 346

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N YAK   + AA++VF S+   ++  WNAM+GG+A  G   E +   S M   G 
Sbjct: 347 GSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGP 406

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D++TF +    C+ +   + G Q+H ++I+++   ++ + NAL+DMY KS  +  A K
Sbjct: 407 QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARK 466

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            FE M   D +SWN +  G+ + +   +   +F + + +G  P+ V+ + ++  C  + +
Sbjct: 467 QFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQE 526

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q  CL +  G        SSLI M+ +CG V  A  VF ++  +N+ + N L++G
Sbjct: 527 LKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAG 586

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SS 481
           Y     + + +  F  I   G++    TF  +++ C  +    +  QIHG ++K GF SS
Sbjct: 587 YTMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSS 645

Query: 482 CGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              +C SL+  Y+N  + +D+   FS       +  W A++S    Q H+ +A+  +  +
Sbjct: 646 SEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHM 705

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                 PD+    ++L +CA + + Q  + IH  +   GFN +    S++ID YAKCGD+
Sbjct: 706 RSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDV 765

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           KG+   F +    N+VI +N++I+  A +G   EA+EIF +M+  ++ P + TF+ V+SA
Sbjct: 766 KGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSA 825

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH G V +G  +F  M + Y +QP  D  GC+VD+L R G+L +A+  I  +  +  P 
Sbjct: 826 CSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPM 885

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           ++ +LL  CR HG++  G+ A++KL+ L P+
Sbjct: 886 LWSTLLGACRKHGDEVRGKRAADKLMELKPQ 916



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 275/605 (45%), Gaps = 37/605 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K+G      L N ++ +Y KCG   +  + F  + ++++ +W  ++S  + +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           F   ++ +V M  +   PNEF    V+  C  +    FG  +HC   K       F    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YAK   +  A  VF    + D   W A+I GY   G+  EA+ V   M   G   D
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T                                +++VNA    Y+    +  A K+F 
Sbjct: 243 QITL-------------------------------VTVVNA----YVALGRLADARKLFT 267

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++ + +V++WN +  G ++     +  S F +   +G +    +   +L     L  L+ 
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A   G  D   V S+L+ M+ +C  ++ A  VF+++  +NI  WN +L G+  
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    +V++ F  +   G + +  TF  +   C         GQ+H  +IK  F+S  ++
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y   G L  + +     +  D  SW A++   V + +N EA  +F  +V  G 
Sbjct: 448 ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            PDE  L +I+++CA +   +R +  H  ++K+G +T     S++ID Y KCG +  AR 
Sbjct: 508 LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F  S  S +V+  N LI  Y   G + EA+ +F ++++  L+P++ TF  ++  C    
Sbjct: 568 VF-YSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAF 625

Query: 666 LVDKG 670
           +++ G
Sbjct: 626 MLNLG 630



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/607 (26%), Positives = 277/607 (45%), Gaps = 7/607 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   +L     G+ VH    K G  +++++ + L+ MY+KC       +VF+ + 
Sbjct: 312 LGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG 371

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN+V W  ++    QNG     ++ +  MK +G  P+EF   S+   C S+    FG  
Sbjct: 372 ERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQ 431

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   N FV  ++++ YAK G +  A + F  +   D   WNA+I GY    Y
Sbjct: 432 LHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEY 491

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA  +   M+  G+  D+ +  + +  C+ V +   G+Q H L+++  ++ S    ++
Sbjct: 492 NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSS 551

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY+K   +  A  VF  M  ++V+S N L  G++   +  +   LF +  + G +P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPT 610

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTF+ LL  C     L+LG Q+    +  GFL   E V  SL+ ++        + ++F
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLF 670

Query: 406 DNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             + Y K +  W  L+SGY         L+ + ++    +  +   F  V+  C    + 
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSL 730

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
           Q   +IH  I  TGF+     CSSLI  Y   G +  S + F     R ++ SW +M+  
Sbjct: 731 QNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVG 790

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNT 582
           L   G+  EA+ IF  + +    PDE     +L++C+  G     + +   ++       
Sbjct: 791 LAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQP 850

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V     ++D   + G +  A    ++     D ++++TL+ A   HG         D  
Sbjct: 851 RVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAAD-- 908

Query: 643 KLANLQP 649
           KL  L+P
Sbjct: 909 KLMELKP 915



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 164/698 (23%), Positives = 304/698 (43%), Gaps = 38/698 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    A  LS    L+    G QVH  + K GF    F Q  LI MY+KC Y     
Sbjct: 138 VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDAR 197

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD     + VSWT +++  +++G     +K++  M+  G  P++  +           
Sbjct: 198 LVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITL----------- 246

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                                    +V+N Y  LG +A A ++F  I + +V  WN MI 
Sbjct: 247 ------------------------VTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMIS 282

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+A  G+  EA++    +   G+   + +  + L   + ++  + G  +H    +  ++ 
Sbjct: 283 GHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD 342

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ + +AL++MY K S MD A +VF  + +++++ WN + GGF++N    +    F    
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMK 402

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G +P+  TF+ +   C  L  L+ G QL  + +   F     V ++L+ M+ + GA++
Sbjct: 403 RHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALK 462

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F+ +   +  +WN ++ GY     + +    F  +  +GV  +  +   +V  C 
Sbjct: 463 EARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACA 522

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             +  +   Q H  ++K G  +     SSLI  YV  G +  + +        ++ S  A
Sbjct: 523 NVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNA 582

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++     GH  EA+ +F  +   G KP E     +L+ C         + IH  V+K G
Sbjct: 583 LIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 580 F-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           F ++   V  +++  Y        +   F +      ++V+  LI  YA      +A++ 
Sbjct: 642 FLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           +  M+  N+ P QA F SV+ AC+    +  G  +  S+    G          L+DM +
Sbjct: 702 YQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEI-HSLIFHTGFNMDEVTCSSLIDMYA 760

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           + G ++ +  V   MP + +   + S++ G   +G  E
Sbjct: 761 KCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 37/322 (11%)

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           ++ ++ +CG V+ A   F  +  K++  WN +LS Y  +   A V+++F  +W   V  N
Sbjct: 82  IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPN 141

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C   ++     Q+H  + KTGF    +    LI  Y     L ++    +
Sbjct: 142 EFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           GA  LD  SW A+++  V  G   EAV +F  +   G  PD+  L T++N          
Sbjct: 202 GALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVN---------- 251

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
                                    AY   G +  AR  F Q  N N V+ +N +I  +A
Sbjct: 252 -------------------------AYVALGRLADARKLFTQIPNPN-VVAWNVMISGHA 285

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   EA+  F ++K   L+ ++++  SV+SA +   +++ G ++  +  ++ G+  + 
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV-HAQATKEGLDDNV 344

Query: 688 DCYGCLVDMLSRNGYLEDAKHV 709
                LV+M ++   ++ AK V
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQV 366



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 14/323 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA  +S   N++    G Q H  +VK+G        ++LI MY KCG       VF
Sbjct: 510 DEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  RN+VS   ++ A    G  +  + ++ +++  G  P E     ++  C       
Sbjct: 570 YSMPSRNVVSVNALI-AGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN 628

Query: 163 FGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            G  IH   +K   +  +  V  S+L  Y        +E +F  +     +  W A+I G
Sbjct: 629 LGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISG 688

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS----- 275
           YA   +  +AL     M  + I  D+  F + L+ C+ ++    G++IH LI  +     
Sbjct: 689 YAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMD 748

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASL 334
           EV CS     +LIDMY K   +  + +VF  M  + +VISWN++  G ++N    +   +
Sbjct: 749 EVTCS-----SLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEI 803

Query: 335 FHKFILSGSRPNHVTFSILLRQC 357
           F +       P+ VTF  +L  C
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSAC 826



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 10/239 (4%)

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   +K G    G + + ++  YV  G +D + +  +  E+ D+ +W +++S  +  G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
               V  F  +     +P+E+    +L++C+ +      + +H  V K GF    +    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKC  ++ AR+ FD + N  D + +  LI  Y   G   EA+++FD+M+     P
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNL-DTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD--CYGCLVDMLSRNGYLEDA 706
            Q T V+V++A    G +     LF  +       P+P+   +  ++   ++ G+ E+A
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQI-------PNPNVVAWNVMISGHAKRGFAEEA 293



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 10/154 (6%)

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + A    K IH   +K+G   +  + + ++D Y KCG++  A+ AF +     DV  +N+
Sbjct: 54  LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSR-LEKKDVFAWNS 112

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSM 677
           ++  Y  HGL +  ++ F  M    ++P++ TF  V+SACS    V+ G    C +FK+ 
Sbjct: 113 VLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKT- 171

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
               G      C G L+DM ++  YL DA+ V +
Sbjct: 172 ----GFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/705 (31%), Positives = 369/705 (52%), Gaps = 6/705 (0%)

Query: 59  SRVL--GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           SR L  G  +H  +++ G   D FL ++L+ MY KCG       VFD M  R++V+WT +
Sbjct: 73  SRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAM 132

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           VSA    G+    L+++ +M   G +PN FA+ + +K C       F   +H  A+K+  
Sbjct: 133 VSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEG 192

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +P+V  S++  Y   G+V  AER            WNA++  YA  G   + + V   
Sbjct: 193 LFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDK 252

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ++  G  + KYT    L+ C  +     G+ +HGL+I+  +E    + N LI+MY K   
Sbjct: 253 LVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLS 312

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            + A++VF R+ + DV+  + +   F  +    +   +F +    G +PN  TF  L   
Sbjct: 313 AEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIV 372

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             +  D++L   +    +  GF   + V  +++ M+ + GAV+ A   FD +   +I +W
Sbjct: 373 ASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASW 432

Query: 417 NELLSG-YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           N LLSG Y  N C+   L+ F  +   GV  N  T+  ++  C    + +   Q+H  ++
Sbjct: 433 NTLLSGFYSGNNCEHG-LRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVL 491

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K+GF     +   L+  YV  G   N+    +  +  D+ SW  +MS         +A+ 
Sbjct: 492 KSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIE 551

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F S++   ++P++  L T L+ C+ +        +H + IK G+N+ V V+SA++D Y 
Sbjct: 552 CFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYV 610

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG++  A M FD+S +++D++ +NT+I  YA HG   +A+E F +M      P + TFV
Sbjct: 611 KCGNLADAEMLFDES-DTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFV 669

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+SACSH GL+D+G   FK + S YG+ P+ + Y C+VD+L++ G L +A+ +I  MP 
Sbjct: 670 GVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPL 729

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            P  ++++++L  CR+HGN E+ E A+EKL    P + ++ +LLS
Sbjct: 730 TPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLS 774



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/598 (23%), Positives = 271/598 (45%), Gaps = 8/598 (1%)

Query: 52  SLSENLKSRVLGT------QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           +L+  LK+  +G+      QVH   VKL    D ++ ++L+  Y  CG      R   + 
Sbjct: 163 ALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDS 222

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R+ VSW  +++   ++G++   + ++  +  +G   +++ + +V+K C+ +G ++ G 
Sbjct: 223 PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQ 282

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H   +K  +E +  +   ++  Y+K      A  VF  I   DV   + MI  +    
Sbjct: 283 AVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHD 342

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA ++   M   G+  ++YTF+      S   D ++ R IH  I++S    +  + +
Sbjct: 343 MAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCD 402

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           A++ MY+K+  +  A   F+ M   D+ SWNTL  GF    N      +F + I  G   
Sbjct: 403 AIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLA 462

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T+  +LR C  L+DL  G Q+    L  GF  + +V+  L+ M+ + G    A  VF
Sbjct: 463 NKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVF 522

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D +  +++ +W  ++S Y         ++ F ++       N  T    +  C       
Sbjct: 523 DRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLG 582

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              Q+H   IK+G++S   + S+L+  YV  G L ++    + ++  D+  W  ++    
Sbjct: 583 SGLQLHSYTIKSGWNS-SVVSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYA 641

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEV 584
             GH ++A+  F  +++ G  PDE     +L++C+  G     +     +  + G    +
Sbjct: 642 QHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTL 701

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
              + ++D  AK G +  A    ++   + D  ++ T++ A   HG +  A    +K+
Sbjct: 702 EHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKL 759



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/565 (24%), Positives = 253/565 (44%), Gaps = 7/565 (1%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            + ++ C +  A   G ++H   L+     + F+  S+LN Y K G +A A  VF  +  
Sbjct: 64  AAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPH 123

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            DV  W AM+      G    AL + + M  EG+  + +    AL+ C++ +D     Q+
Sbjct: 124 RDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQV 183

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H   ++ E      + ++L++ Y+    +D A +       +  +SWN L   ++ + + 
Sbjct: 184 HAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDY 243

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   +F K + SG   +  T   +L+ C +L     G  +  L +  G   +  + + L
Sbjct: 244 AKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCL 303

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD--ADVLKTFCNIWESGVEV 446
           I M+ +C + E A+ VF  +   ++   + ++S  CF+  D   +    F  + + GV+ 
Sbjct: 304 IEMYSKCLSAEDAYEVFARIDEPDVVHCSLMIS--CFDRHDMAPEAFDIFMQMSDMGVKP 361

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  TF  +     R+ +  +   IH  I+K+GFS    +C +++  YV  G + ++    
Sbjct: 362 NQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAF 421

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  +  D+ASW  ++S      +    + IF  L+  G   ++Y    IL  C ++   +
Sbjct: 422 DLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLR 481

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
               +H  V+K GF  +  V+  ++D Y + G    AR+ FD+     DV  +  ++  Y
Sbjct: 482 FGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDR-LKERDVFSWTVVMSTY 540

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A      +A+E F  M   N +P+ AT  + +S CS    +  G L   S   + G   S
Sbjct: 541 AKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSG-LQLHSYTIKSGWNSS 599

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIE 711
                 LVDM  + G L DA+ + +
Sbjct: 600 V-VSSALVDMYVKCGNLADAEMLFD 623



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 209/465 (44%), Gaps = 4/465 (0%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           ++  ALQGC+       G+ +H  ++RS       + ++L++MY K   +  A  VF+ M
Sbjct: 62  SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             +DV++W  +    +   + G    LF +    G  PN    +  L+ C    DL    
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           Q+   A+    L +  V+SSL+  +  CG V++A     +   ++  +WN LL+ Y  + 
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYIC 486
             A V+  F  + ESG E++  T   V++ CC        GQ +HG +IK G  +   + 
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLK-CCMELGLAKSGQAVHGLVIKRGLETDRVLN 300

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           + LI+ Y      ++++E     +  D+     M+S         EA  IF  + + G K
Sbjct: 301 NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVK 360

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P++Y    +    +  G     +SIH  ++K GF+    V  A++  Y K G ++ A +A
Sbjct: 361 PNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILA 420

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           FD      D+  +NTL+  +         + IF ++    +  ++ T+V ++  C+    
Sbjct: 421 FDL-MQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMD 479

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           +  GC +   +  + G Q   D    L+DM  + G   +A+ V +
Sbjct: 480 LRFGCQVHACV-LKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFD 523



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 11/186 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R +   LA SLS+  +L     G Q+H + +K G+ + + + + L+ MY KCG       
Sbjct: 562 RPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEM 620

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FDE    +LV W  I+    Q+G     L+ + +M   G +P+E     V+  C   G 
Sbjct: 621 LFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGL 680

Query: 161 SEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
            + G          + +   +E      C V +  AK G +A AE +   +  + D   W
Sbjct: 681 LDEGRRYFKLLSSVYGITPTLEH---YACMV-DILAKAGKLAEAESLINEMPLTPDASLW 736

Query: 215 NAMIGG 220
             ++G 
Sbjct: 737 KTILGA 742


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/701 (31%), Positives = 368/701 (52%), Gaps = 8/701 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG I+  G   D +L N LI +YS+ G   +  +VF++M ERNLVSW+ +VSA   +G 
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFV 182
           ++  L ++++  +T    PNE+ + S ++ C  +        + +  F +K   +++ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++FY K G++  A  VF ++       W  MI G    G  + +L +   ++ + +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D Y     L  CS++   + G+QIH  I+R  +E   S++N LID Y+K   +  A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M +K++ISW TL  G+ +N    +   LF      G +P+    S +L  C  L  
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q+    +     ++  VT+SLI M+ +C  +  A  VFD  +  ++  +N ++ G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425

Query: 423 YCFNCCDADV---LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           Y       ++   L  F ++    +  +  TF  ++       +  +  QIHG + K G 
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   +  S+LI  Y N   L +S    +  +  D+  W +M +  V Q  N EA+ +F  
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L  + E+PDE+    ++ +   + + Q  +  H  ++K G     Y+ +A++D YAKCG 
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            + A  AFD S  S DV+ +N++I +YA+HG   +A+++ +KM    ++P+  TFV V+S
Sbjct: 606 PEDAHKAFD-SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLV+ G   F+ M  ++G++P  + Y C+V +L R G L  A+ +IE MP +P+ 
Sbjct: 665 ACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+RSLLSGC   GN EL E A+E  +L  PK+  +  +LS
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H HI++ G   D  L N LI  Y KCG      ++F+ M  +N++SWT ++S   Q
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      ++++  M   G  P+ +A  S++  C S+ A  FG  +H + +K  +  + +V
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF---EALNVVSSMLF 239
             S+++ YAK   +  A +VF   ++ DV  +NAMI GY+  G  +   EALN+   M F
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             I     TF++ L+  + +    + +QIHGL+ +  +   I   +ALID+Y     +  
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           +  VF+ M  KD++ WN++F G+ +     +  +LF +  LS  RP+  TF+ ++   G 
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  + LG +  C  L  G      +T++L+ M+ +CG+ E AH  FD+ + +++  WN +
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +S Y  +      L+    +   G+E N  TF  V+  C
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/612 (22%), Positives = 277/612 (45%), Gaps = 4/612 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           + R +  Q+   +VK GF  D+++   LI  Y K G   +   VFD + E++ V+WT ++
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  ++ G   + L+++  +  +  +P+ + + +V+  C  +   E G  IH   L+  +E
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +   +++ Y K G V AA ++F  + + ++  W  ++ GY       EA+ + +SM
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  D Y   + L  C+ +     G Q+H   I++ +     + N+LIDMY K   +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSE---NKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             A KVF+  A  DV+ +N +  G+S         +  ++F        RP+ +TF  LL
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R    L  L L  Q+  L    G   +    S+LI ++  C  ++ +  VFD +  K++ 
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN + +GY     + + L  F  +  S    +  TF  +V       + Q+  + H  +
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K G     YI ++L+  Y   G  +++ +  + A   D+  W +++S+  + G   +A+
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +   ++  G +P+      +L++C+  G  +        +++ G   E      ++   
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL 701

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            + G +  AR   ++       IV+ +L+   A  G V E  E   +M + +      +F
Sbjct: 702 GRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV-ELAEHAAEMAILSDPKDSGSF 760

Query: 655 VSVMSACSHKGL 666
             + +  + KG+
Sbjct: 761 TMLSNIYASKGM 772


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/703 (32%), Positives = 360/703 (51%), Gaps = 10/703 (1%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            G  +H    + G   ++++   L+ +Y   G      R+F EM ERN+VSWT ++ A   
Sbjct: 365  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 424

Query: 123  NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            NG  +  L+ Y  M+ +G   N  A  +V+ +C S+     G  +    +   ++    V
Sbjct: 425  NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 484

Query: 183  GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              S++  +  LG V  AE++F  +   D   WNAMI  Y+H G   +   V S M   G+
Sbjct: 485  ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              D  T  + +  C+    F  G  IH L +RS ++ S++++NAL++MY  +  +  A  
Sbjct: 545  RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 604

Query: 303  VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC---GK 359
            +F  M+ +D+ISWNT+   + +N N         +   +   PNH+TFS  L  C   G 
Sbjct: 605  LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 664

Query: 360  LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            L+D   G  +  + L         V +SLI M+ +C ++E A  VF ++   +I ++N L
Sbjct: 665  LID---GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 721

Query: 420  LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
            + GY         ++ F  +  +G++ N  T   +  +   S +    G+ +H  II+TG
Sbjct: 722  IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTG 781

Query: 479  FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            F S  Y+ +SLI  Y   G L++S    N     ++ SW A+++A V  GH  EA+ +F 
Sbjct: 782  FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFI 841

Query: 539  SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
             +  AG K D   L   L+SCA++ + +    +H   +K G +++ YV +A +D Y KCG
Sbjct: 842  DMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCG 901

Query: 599  DI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
             + +  ++  DQ+        +NTLI  YA +G   EA E F +M     +P   TFV++
Sbjct: 902  KMDEMLQVVPDQAIRPQQ--CWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVAL 959

Query: 658  MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
            +SACSH GLVDKG   + SM S +G+ P      C+VD+L R G   +A+  IE MP  P
Sbjct: 960  LSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLP 1019

Query: 718  SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +  ++RSLLS  R H N E+G   ++KLL L P +D+A+VLLS
Sbjct: 1020 NDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLS 1062



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 254/517 (49%), Gaps = 1/517 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  +SL  +L++ V G QV   ++  G  N + + N+LI M+   G      ++FD M E
Sbjct: 451 ATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEE 510

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            + +SW  ++S     G       ++ DM+ +G  P+   + S+M VC S      G  I
Sbjct: 511 HDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGI 570

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   L+  ++ +  V  +++N Y+  G ++ AE +F+++S  D+  WN MI  Y      
Sbjct: 571 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNS 630

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +AL  +  +     + +  TF +AL  CS       G+ +H ++++  ++ ++ + N+L
Sbjct: 631 TDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSL 690

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           I MY K + M+ A KVF+ M   D++S+N L GG++  ++  +   +F     +G +PN+
Sbjct: 691 ITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNY 750

Query: 348 VTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           +T   +        DL + G  L    +  GFL +E V +SLI M+ +CG +E + ++F+
Sbjct: 751 ITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFN 810

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           +++ KNI +WN +++         + LK F ++  +G +++       + +C    + + 
Sbjct: 811 SITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEE 870

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             Q+HG  +K+G  S  Y+ ++ +  Y   G++D   +            W  ++S    
Sbjct: 871 GMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAK 930

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
            G+  EA   F  +V  G KPD      +L++C+  G
Sbjct: 931 YGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAG 967



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 161/676 (23%), Positives = 307/676 (45%), Gaps = 12/676 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSK---CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +HG  V+L      F +N L+A Y +          L +FDEMA+R   +W   VS  ++
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFALKIRIEKN 179
            G      +M   M+  G   + FA+ S++  C   G  E    G +IH    +  +  N
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            ++G ++L+ Y   G V+ A+R+F+ +   +V  W A++   +  GY  EAL     M  
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G+  +   F   +  C  + +   G Q+   +I S ++  +S+ N+LI M+     +  
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A K+F+RM + D ISWN +   +S      +   +F      G RP+  T   L+  C  
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                 G  +  L L         V ++L+ M+   G +  A  +F N+S +++ +WN +
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
           +S Y  NC   D LKT   ++ +    N  TF   +   C S    + G+ +H  +++  
Sbjct: 621 ISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSAL-GACSSPGALIDGKMVHAIVLQLS 679

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                 + +SLI  Y     ++++ +        D+ S+  ++          +A+ +F 
Sbjct: 680 LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFS 739

Query: 539 SLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            +  AG KP+   +  I  S A+    +   + +H ++I+ GF ++ YVA+++I  YAKC
Sbjct: 740 WMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKC 799

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G+++ +   F+   N N ++ +N +I A    G   EA+++F  M+ A  +  +      
Sbjct: 800 GNLESSTNIFNSITNKN-IVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAEC 858

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +S+C+    +++G +    +  + G+          +DM  + G +++   V+     +P
Sbjct: 859 LSSCASLASLEEG-MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 917

Query: 718 SPTVYRSLLSGCRIHG 733
               + +L+SG   +G
Sbjct: 918 Q-QCWNTLISGYAKYG 932



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 196/420 (46%), Gaps = 1/420 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D   L   +S+  +      G+ +H   ++    + + + N L+ MYS  G      
Sbjct: 544 LRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 603

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  M+ R+L+SW  ++S+ +QN      LK    +      PN     S +  C S G
Sbjct: 604 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPG 663

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  +H   L++ +++N  VG S++  Y K   +  AE+VF S+ + D+  +N +IG
Sbjct: 664 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIG 723

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF-DIGRQIHGLIIRSEVE 278
           GYA    G +A+ V S M   GI  +  T IN     +   D  + GR +H  IIR+   
Sbjct: 724 GYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFL 783

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               + N+LI MY K   ++ +  +F  + +K+++SWN +     +  +  +   LF   
Sbjct: 784 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDM 843

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             +G++ + V  +  L  C  L  L+ G+QL  L +  G   +  V ++ + M+ +CG +
Sbjct: 844 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 903

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +    V  + + +    WN L+SGY       +  +TF  +  +G + +  TF  ++  C
Sbjct: 904 DEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSAC 963



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSK---CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +HG  V+L      F +N L+A Y +          L +FDEMA+R   +W   VS  ++
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFALKIRIEKN 179
            G      +M   M+  G   + FA+ S++  C   G  E    G +IH    +  +  N
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 157

Query: 180 PFVGCSVLNF 189
            ++G ++L+ 
Sbjct: 158 VYIGRALLHL 167



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 29/174 (16%)

Query: 43   DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
            D + LA+ LS   +L S   G Q+HG  +K G  +D ++ N  + MY KCG     L+V 
Sbjct: 851  DRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVV 910

Query: 103  DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--- 159
             + A R    W  ++S   + G F    + +  M   G  P+     +++  C   G   
Sbjct: 911  PDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVD 970

Query: 160  ---------ASEFGYSI---HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
                     AS FG S    HC                +++   +LG  A AE+
Sbjct: 971  KGIDYYNSMASSFGVSPGIKHCVC--------------IVDLLGRLGRFAEAEK 1010


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/703 (32%), Positives = 360/703 (51%), Gaps = 10/703 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    + G   ++++   L+ +Y   G      R+F EM ERN+VSWT ++ A   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L+ Y  M+ +G   N  A  +V+ +C S+     G  +    +   ++    V
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSV 182

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  +  LG V  AE++F  +   D   WNAMI  Y+H G   +   V S M   G+
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T  + +  C+    F  G  IH L +RS ++ S++++NAL++MY  +  +  A  
Sbjct: 243 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC---GK 359
           +F  M+ +D+ISWNT+   + +N N         +   +   PNH+TFS  L  C   G 
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L+D   G  +  + L         V +SLI M+ +C ++E A  VF ++   +I ++N L
Sbjct: 363 LID---GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 419

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
           + GY         ++ F  +  +G++ N  T   +  +   S +    G+ +H  II+TG
Sbjct: 420 IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTG 479

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  Y+ +SLI  Y   G L++S    N     ++ SW A+++A V  GH  EA+ +F 
Sbjct: 480 FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFI 539

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +  AG K D   L   L+SCA++ + +    +H   +K G +++ YV +A +D Y KCG
Sbjct: 540 DMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCG 599

Query: 599 DI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            + +  ++  DQ+        +NTLI  YA +G   EA E F +M     +P   TFV++
Sbjct: 600 KMDEMLQVVPDQAIRPQQ--CWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVAL 657

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH GLVDKG   + SM S +G+ P      C+VD+L R G   +A+  IE MP  P
Sbjct: 658 LSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLP 717

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  ++RSLLS  R H N E+G   ++KLL L P +D+A+VLLS
Sbjct: 718 NDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLS 760



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 259/530 (48%), Gaps = 6/530 (1%)

Query: 40  LRKDPI-----FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +R+D +       A  +SL  +L++ V G QV   ++  G  N + + N+LI M+   G 
Sbjct: 136 MRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGR 195

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                ++FD M E + +SW  ++S     G       ++ DM+ +G  P+   + S+M V
Sbjct: 196 VHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSV 255

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C S      G  IH   L+  ++ +  V  +++N Y+  G ++ AE +F+++S  D+  W
Sbjct: 256 CASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISW 315

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N MI  Y       +AL  +  +     + +  TF +AL  CS       G+ +H ++++
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             ++ ++ + N+LI MY K + M+ A KVF+ M   D++S+N L GG++  ++  +   +
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQV 435

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           F     +G +PN++T   +        DL + G  L    +  GFL +E V +SLI M+ 
Sbjct: 436 FSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG +E + ++F++++ KNI +WN +++         + LK F ++  +G +++      
Sbjct: 496 KCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAE 555

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
            + +C    + +   Q+HG  +K+G  S  Y+ ++ +  Y   G++D   +         
Sbjct: 556 CLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRP 615

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              W  ++S     G+  EA   F  +V  G KPD      +L++C+  G
Sbjct: 616 QQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAG 665



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 29/174 (16%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA+ LS   +L S   G Q+HG  +K G  +D ++ N  + MY KCG     L+V 
Sbjct: 549 DRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVV 608

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--- 159
            + A R    W  ++S   + G F    + +  M   G  P+     +++  C   G   
Sbjct: 609 PDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVD 668

Query: 160 ---------ASEFGYSI---HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
                    AS FG S    HC                +++   +LG  A AE+
Sbjct: 669 KGIDYYNSMASSFGVSPGIKHCVC--------------IVDLLGRLGRFAEAEK 708


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/715 (30%), Positives = 369/715 (51%), Gaps = 7/715 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +++ L+     ++ + G  +H +++K GF     L+N+LI+ YSKC       RVFDE+ 
Sbjct: 7   ISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIP 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +   VSW+ +V+A   NG     ++ +  M+  G   NEFA+  V+K CV    ++ G  
Sbjct: 65  DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DAQLGAQ 121

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCG 225
           +H  A+      + FV  +++  Y   G +  A RVF    S+ +   WN ++  Y    
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKND 181

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +A+ V   M++ GI   ++ F   +  C+   + D GRQ+H +++R   E  +   N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 241

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY+K   +D A  +FE+M D DV+SWN L  G   N +  +   L  +   SG  P
Sbjct: 242 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 301

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N    S +L+ C      DLG Q+    +      ++ +   L+ M+ +   ++ A  VF
Sbjct: 302 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 361

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D +S++++  WN L+SG        +    F  + + G+ VN  T   V+++    E   
Sbjct: 362 DWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAAS 421

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              Q+H    K GF    ++ + LI SY     L ++          D+ +  +M++AL 
Sbjct: 422 ATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALS 481

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
              H   A+ +F  ++  G +PD ++L ++LN+CA++ AY++ K +H  +IK  F ++ +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             +A++  YAKCG I+ A +AF  S     V+ ++ +I   A HG    A+E+F +M   
Sbjct: 542 AGNALVYTYAKCGSIEDAELAF-SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P+  T  SV+ AC+H GLVD+    F SM   +G+  + + Y C++D+L R G L+D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A  ++  MPFQ + +V+ +LL   R+H + ELG+ A+EKL +L P+    HVLL+
Sbjct: 661 AMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F +D F  N L+  Y+KCG      
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C   G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/712 (30%), Positives = 378/712 (53%), Gaps = 4/712 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           L L  + K+   G QVH H++      N +FL   L+ MY KCG      ++FD M  + 
Sbjct: 85  LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 144

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           + +W  ++ A + NGE    L++Y +M+ +G   +      ++K C  +    +G  +H 
Sbjct: 145 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHG 204

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGF 228
            A+K       FV  S++  Y K  D+  A ++F  +   +DV  WN+MI  Y+  G   
Sbjct: 205 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 264

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL +   M    +  + YTF+ ALQ C   +    G  IH  +++S    ++ + NALI
Sbjct: 265 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 324

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY +   M  A  +F  M D D ISWN++  GF +N    +    +H+   +G +P+ V
Sbjct: 325 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 384

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
               ++    +  +   G+Q+   A+  G   +  V +SL+ M+ +  +++    +FD +
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 444

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             K++ +W  +++G+  N   +  L+ F  +   G++++      ++  C   +    V 
Sbjct: 445 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 504

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IH  II+ G S    + + ++  Y   G +D +       E  D+ SW +M+S  VH G
Sbjct: 505 EIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 563

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             +EA+ +FH + E G +PD   L +IL++ A++ A ++ K IH F+I+ GF  E  +AS
Sbjct: 564 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 623

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            ++D YA+CG ++ +R  F+    + D++++ ++I AY  HG    A+++F +M+  ++ 
Sbjct: 624 TLVDMYARCGTLEKSRNVFN-FIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P    FV+V+ ACSH GL+++G    +SM  +Y ++P P+ Y CLVD+L R  +LE+A  
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++ M  +P+  V+ +LL  C+IH NKELGE A++KLL + P+N   +VL+S
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVS 794



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 1/321 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+  + D + +   ++ S    + + G Q+H + +K G  +D+ + N+L+ MY+K     
Sbjct: 376 DAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 435

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +   +FD+M ++++VSWT I++   QNG     L+++ +++  G   +   + S++  C 
Sbjct: 436 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 495

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +        IH + ++  +  +  +   +++ Y + G+V  A R+F  I   DV  W +
Sbjct: 496 GLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTS 554

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI  Y H G   EAL +   M   G+  D  + ++ L   + ++    G++IHG +IR  
Sbjct: 555 MISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKG 614

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                S+ + L+DMY +   ++ +  VF  + +KD++ W ++   +  +        LF 
Sbjct: 615 FVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 674

Query: 337 KFILSGSRPNHVTFSILLRQC 357
           +       P+H+ F  +L  C
Sbjct: 675 RMEDESIAPDHIAFVAVLYAC 695


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/684 (29%), Positives = 374/684 (54%), Gaps = 3/684 (0%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+   N +I  Y++ G  G+   +FD M ER++VSW  ++S  + NG     ++++V M+
Sbjct: 71  DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130

Query: 138 TNGFMPNEFAVGSV-MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           +   +P+++A  SV +K C  +     G  +HC A+++  E +   G ++++ Y+K   +
Sbjct: 131 SLK-IPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKL 189

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A R+F  +   ++ CW+A+I GY       E L +   ML  G+ + + T+ +  + C
Sbjct: 190 DGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC 249

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++ F +G Q+HG  ++S+      I  A +DMY K   M  A+KVF  + +    S+N
Sbjct: 250 AGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYN 309

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G++      +   +F     +    + ++ S  L  C  +     G+QL  LA+ C
Sbjct: 310 AIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC 369

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G      V ++++ M+ +CGA+  A ++FD++  ++  +WN +++ +  N      L  F
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            ++  S +E +  T+  VV+ C   +      +IHG I+K+G     ++ S+L+  Y   
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G L  + +  +  E     SW +++S    Q  +  A   F  ++E G  PD +   T+L
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           + CA +   +  K IH  ++KL  +++VY+AS ++D Y+KCG+++ +R+ F+++    D 
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKT-PKRDY 608

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + ++ +I AYA+HG   +A+++F++M+L N++P+   F+SV+ AC+H G VDKG   F+ 
Sbjct: 609 VTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQI 668

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M S YG+ P  + Y C+VD+L R+  + +A  +IE M F+    ++R+LLS C++ GN E
Sbjct: 669 MQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVE 728

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           + E A   LL L P++ +A+VLL+
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLA 752



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/595 (27%), Positives = 291/595 (48%), Gaps = 7/595 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH   +++GF ND+   + L+ MYSKC       R+F EM ERNLV W+ +++  +
Sbjct: 156 LGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYV 215

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN  F  GLK++ DM   G   ++    SV + C  + A + G  +H  ALK     +  
Sbjct: 216 QNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSI 275

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G + L+ YAK   ++ A +VF ++ +     +NA+I GYA    G +AL +  S+    
Sbjct: 276 IGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTY 335

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D+ +   AL  CS++     G Q+HGL ++  +  +I + N ++DMY K   +  A 
Sbjct: 336 LSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEAC 395

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ M  +D +SWN +     +N+   +T SLF   + S   P+  T+  +++ C    
Sbjct: 396 TIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQ 455

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G+++    +  G   +  V S+L+ M+ +CG +  A  + D +  K   +WN ++S
Sbjct: 456 ALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIIS 515

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+       +  + F  + E GV  +  T+  V++ C      ++  QIH  I+K    S
Sbjct: 516 GFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHS 575

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             YI S+L+  Y   G + +S        + D  +W AM+ A  + GH  +A+ +F  + 
Sbjct: 576 DVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQ 635

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCG 598
               KP+  I  ++L +CA +G     K +H F I     G +  +   S ++D   +  
Sbjct: 636 LLNVKPNHTIFISVLRACAHMGYVD--KGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSD 693

Query: 599 DIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            +  A ++     F ++DVI + TL+      G V  A + F+ +   + Q S A
Sbjct: 694 QVNEALKLIESMHFEADDVI-WRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSA 747



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 248/514 (48%), Gaps = 34/514 (6%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K+TF + LQ CS +   + G+Q H  +I +    +I + N L+  Y KSS M+YAFKVF+
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKF--------------------------- 338
           RM  +DVISWNT+  G++E  N G   SLF                              
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 339 ---ILSGSRP-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
              + S   P ++ TFS++L+ C  + D  LGLQ+ CLA+  GF ++    S+L+ M+ +
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           C  ++ A  +F  +  +N+  W+ +++GY  N    + LK F ++ + G+ V+  T+  V
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             +C      ++  Q+HG  +K+ F+    I ++ +  Y    ++ ++++  N       
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR 305

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            S+ A++     Q    +A+ IF SL       DE  L   L +C+ I  +     +H  
Sbjct: 306 QSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGL 365

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            +K G    + VA+ ++D Y KCG +  A   FD      D + +N +I A+  +  + +
Sbjct: 366 AVKCGLGFNICVANTILDMYGKCGALVEACTIFD-DMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
            + +F  M  + ++P   T+ SV+ AC+ +  ++ G  +   +  + GM         LV
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRI-VKSGMGLDWFVGSALV 483

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           DM  + G L +A+ + + +  + +   + S++SG
Sbjct: 484 DMYGKCGMLMEAEKIHDRLE-EKTTVSWNSIISG 516



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 144/639 (22%), Positives = 278/639 (43%), Gaps = 40/639 (6%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
            +F    +++ C ++ A   G   H   +        +V   ++ FY K  ++  A +VF
Sbjct: 5   KKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVF 64

Query: 204 YSISSDDVGCWNAMIGGYA-------------------------------HCGYGFEALN 232
             +   DV  WN MI GYA                               H G   +++ 
Sbjct: 65  DRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIE 124

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   M    I  D  TF   L+ CS + D+ +G Q+H L I+   E  +   +AL+DMY 
Sbjct: 125 IFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +D AF++F  M +++++ W+ +  G+ +N    +   LF   +  G   +  T++ 
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           + R C  L    LG QL   AL   F  +  + ++ + M+ +C  +  A  VF+ +    
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPP 304

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             ++N ++ GY         L+ F ++  + +  +  +    +  C   +      Q+HG
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHG 364

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             +K G      + ++++  Y   G L  +    +  ER D  SW A+++A        +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            +++F S++ +  +PD++  G+++ +CA   A      IH  ++K G   + +V SA++D
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVD 484

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KCG +  A    D+       + +N++I  ++       A   F +M    + P   
Sbjct: 485 MYGKCGMLMEAEKIHDR-LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNF 543

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQ-YGMQPSPDCY--GCLVDMLSRNGYLEDAKHV 709
           T+ +V+  C++   ++ G    K + +Q   +    D Y    LVDM S+ G ++D++ +
Sbjct: 544 TYATVLDVCANMATIELG----KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            E  P +   T + +++     HG+ E      E++ LL
Sbjct: 600 FEKTPKRDYVT-WSAMICAYAYHGHGEQAIKLFEEMQLL 637



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 192/391 (49%), Gaps = 2/391 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q    ++L  D I L+ +L+    +K  + G Q+HG  VK G   +I + N ++ MY KC
Sbjct: 329 QSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKC 388

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +FD+M  R+ VSW  I++A  QN E    L ++V M  +   P++F  GSV+
Sbjct: 389 GALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVV 448

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C    A  +G  IH   +K  +  + FVG ++++ Y K G +  AE++   +      
Sbjct: 449 KACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTV 508

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN++I G++       A    S ML  G+  D +T+   L  C+ +A  ++G+QIH  I
Sbjct: 509 SWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQI 568

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++  +   + I + L+DMY K   M  +  +FE+   +D ++W+ +   ++ + +  Q  
Sbjct: 569 LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAI 628

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
            LF +  L   +PNH  F  +LR C  +  +D GL   Q +  H G        S ++ +
Sbjct: 629 KLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDL 688

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
             R   V  A  + +++ ++ +   W  LLS
Sbjct: 689 LGRSDQVNEALKLIESMHFEADDVIWRTLLS 719


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/690 (29%), Positives = 365/690 (52%), Gaps = 3/690 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
            +V   + ++G   D      ++  Y   G      ++F ++   N+V+W +++S   + 
Sbjct: 228 VKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKR 287

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G  +  +  ++++K  G      ++GSV+    S+    +G  +H  A K  ++ N +VG
Sbjct: 288 GFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVG 347

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++N YAK   + AA++VF S+   ++  WNAM+GG+A  G   E +   S M   G  
Sbjct: 348 SALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQ 407

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D++TF +    C+ +   + G Q+H ++I+++   ++ + NAL+DMY KS  +  A K 
Sbjct: 408 PDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQ 467

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE M   D +SWN +  G+ + +   +   +F + + +G  P+ V+ + ++  C  + +L
Sbjct: 468 FELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQEL 527

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G Q  CL +  G        SSLI M+ +CG V  A  VF ++  +N+ + N L++GY
Sbjct: 528 KRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGY 587

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SSC 482
                + + +  F  I   G++    TF  +++ C  +    +  QIHG ++K GF SS 
Sbjct: 588 TMGHLE-EAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSS 646

Query: 483 GYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +C SL+  Y+N  + +D+   FS       +  W A++S    Q H+ +A+  +  + 
Sbjct: 647 EMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMR 706

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
                PD+    ++L +CA + + Q  + IH  +   GFN +    S++ID YAKCGD+K
Sbjct: 707 SDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVK 766

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           G+   F +    N+VI +N++I+  A +G   EA+EIF +M+  ++ P + TF+ V+SAC
Sbjct: 767 GSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH G V +G  +F  M + Y + P  D  GC+VD+L R G+L +A+  I  +  +  P +
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPML 886

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           + +LL  CR HG++  G+ A++KL+ L P+
Sbjct: 887 WSTLLGACRKHGDEVRGKRAADKLMELKPQ 916



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 151/605 (24%), Positives = 275/605 (45%), Gaps = 37/605 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K+G      L N ++ +Y KCG   +  + F  + ++++ +W  ++S  + +G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           F   ++ +V M  +   PNEF    V+  C  +    FG  +HC   K       F    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YAK   +  A  VF    + D   W A+I GY   G+  EA+ V   M   G   D
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPD 242

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T                                +++VNA    Y+    +  A K+F 
Sbjct: 243 QITL-------------------------------VTVVNA----YVALGRLADARKLFT 267

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++ + +V++WN +  G ++     +  S F +   +G +    +   +L     L  L+ 
Sbjct: 268 QIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNY 327

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A   G  D   V S+L+ M+ +C  ++ A  VF+++  +NI  WN +L G+  
Sbjct: 328 GSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQ 387

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    +V++ F  +   G + +  TF  +   C         GQ+H  +IK  F+S  ++
Sbjct: 388 NGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFV 447

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y   G L  + +     +  D  SW A++   V + +N EA  +F  +V  G 
Sbjct: 448 ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGV 507

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            PDE  L +I+++CA +   +R +  H  ++K+G +T     S++ID Y KCG +  AR 
Sbjct: 508 LPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARD 567

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F  S  S +V+  N LI  Y   G + EA+ +F ++++  L+P++ TF  ++  C    
Sbjct: 568 VF-YSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAF 625

Query: 666 LVDKG 670
           +++ G
Sbjct: 626 MLNLG 630



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 161/607 (26%), Positives = 277/607 (45%), Gaps = 7/607 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   +L     G+ VH    K G  +++++ + L+ MY+KC       +VF+ + 
Sbjct: 312 LGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLG 371

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN+V W  ++    QNG     ++ +  MK +G  P+EF   S+   C S+    FG  
Sbjct: 372 ERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQ 431

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   N FV  ++++ YAK G +  A + F  +   D   WNA+I GY    Y
Sbjct: 432 LHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEY 491

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA  +   M+  G+  D+ +  + +  C+ V +   G+Q H L+++  ++ S    ++
Sbjct: 492 NDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSS 551

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY+K   +  A  VF  M  ++V+S N L  G++   +  +   LF +  + G +P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMG-HLEEAIHLFQEIQMVGLKPT 610

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTF+ LL  C     L+LG Q+    +  GFL   E V  SL+ ++        + ++F
Sbjct: 611 EVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLF 670

Query: 406 DNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             + Y K +  W  L+SGY         L+ + ++    +  +   F  V+  C    + 
Sbjct: 671 SELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSL 730

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
           Q   +IH  I  TGF+     CSSLI  Y   G +  S + F     R ++ SW +M+  
Sbjct: 731 QNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVG 790

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNT 582
           L   G+  EA+ IF  + +    PDE     +L++C+  G     + +   ++       
Sbjct: 791 LAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLP 850

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V     ++D   + G +  A    ++     D ++++TL+ A   HG         D  
Sbjct: 851 RVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAAD-- 908

Query: 643 KLANLQP 649
           KL  L+P
Sbjct: 909 KLMELKP 915



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 164/698 (23%), Positives = 304/698 (43%), Gaps = 38/698 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    A  LS    L+    G QVH  + K GF    F Q  LI MY+KC Y     
Sbjct: 138 VRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDAR 197

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD     + VSWT +++  +++G     +K++  M+  G  P++  +           
Sbjct: 198 LVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITL----------- 246

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                                    +V+N Y  LG +A A ++F  I + +V  WN MI 
Sbjct: 247 ------------------------VTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMIS 282

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+A  G+  EA++    +   G+   + +  + L   + ++  + G  +H    +  ++ 
Sbjct: 283 GHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD 342

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ + +AL++MY K S MD A +VF  + +++++ WN + GGF++N    +    F    
Sbjct: 343 NVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMK 402

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G +P+  TF+ +   C  L  L+ G QL  + +   F     V ++L+ M+ + GA++
Sbjct: 403 RHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALK 462

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F+ +   +  +WN ++ GY     + +    F  +  +GV  +  +   +V  C 
Sbjct: 463 EARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACA 522

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             +  +   Q H  ++K G  +     SSLI  YV  G +  + +        ++ S  A
Sbjct: 523 NVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNA 582

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++     GH  EA+ +F  +   G KP E     +L+ C         + IH  V+K G
Sbjct: 583 LIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWG 641

Query: 580 F-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           F ++   V  +++  Y        +   F +      ++V+  LI  YA      +A++ 
Sbjct: 642 FLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQF 701

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           +  M+  N+ P QA F SV+ AC+    +  G  +  S+    G          L+DM +
Sbjct: 702 YQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEI-HSLIFHTGFNMDEVTCSSLIDMYA 760

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           + G ++ +  V   MP + +   + S++ G   +G  E
Sbjct: 761 KCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAE 798



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 143/322 (44%), Gaps = 37/322 (11%)

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           ++ ++ +CG V+ A   F  +  K++  WN +LS Y  +   A V+++F  +W   V  N
Sbjct: 82  IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPN 141

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C   ++     Q+H  + KTGF    +    LI  Y     L ++    +
Sbjct: 142 EFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           GA  LD  SW A+++  V  G   EAV +F  +   G  PD+  L T++N          
Sbjct: 202 GALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVN---------- 251

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
                                    AY   G +  AR  F Q  N N V+ +N +I  +A
Sbjct: 252 -------------------------AYVALGRLADARKLFTQIPNPN-VVAWNVMISGHA 285

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   EA+  F ++K   L+ ++++  SV+SA +   +++ G ++  +  ++ G+  + 
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMV-HAQATKEGLDDNV 344

Query: 688 DCYGCLVDMLSRNGYLEDAKHV 709
                LV+M ++   ++ AK V
Sbjct: 345 YVGSALVNMYAKCSKMDAAKQV 366



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 14/323 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA  +S   N++    G Q H  +VK+G        ++LI MY KCG       VF
Sbjct: 510 DEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVF 569

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  RN+VS   ++ A    G  +  + ++ +++  G  P E     ++  C       
Sbjct: 570 YSMPSRNVVSVNALI-AGYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLN 628

Query: 163 FGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            G  IH   +K   +  +  V  S+L  Y        +E +F  +     +  W A+I G
Sbjct: 629 LGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISG 688

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS----- 275
           YA   +  +AL     M  + I  D+  F + L+ C+ ++    G++IH LI  +     
Sbjct: 689 YAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMD 748

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASL 334
           EV CS     +LIDMY K   +  + +VF  M  + +VISWN++  G ++N    +   +
Sbjct: 749 EVTCS-----SLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEI 803

Query: 335 FHKFILSGSRPNHVTFSILLRQC 357
           F +       P+ VTF  +L  C
Sbjct: 804 FKQMEQQSIIPDEVTFLGVLSAC 826



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 114/239 (47%), Gaps = 10/239 (4%)

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   +K G    G + + ++  YV  G +D + +  +  E+ D+ +W +++S  +  G 
Sbjct: 63  IHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGL 122

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
               V  F  +     +P+E+    +L++C+ +      + +H  V K GF    +    
Sbjct: 123 FATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGG 182

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKC  ++ AR+ FD + N  D + +  LI  Y   G   EA+++FD+M+     P
Sbjct: 183 LIDMYAKCRYLRDARLVFDGALNL-DTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAP 241

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD--CYGCLVDMLSRNGYLEDA 706
            Q T V+V++A    G +     LF  +       P+P+   +  ++   ++ G+ E+A
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQI-------PNPNVVAWNVMISGHAKRGFAEEA 293



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A    K IH   +K+G   +  + + ++D Y KCG++  A+ AF +     DV  +N+++
Sbjct: 56  ALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSR-LEKKDVFAWNSVL 114

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDS 679
             Y  HGL +  ++ F  M    ++P++ TF  V+SACS    V+ G    C +FK+   
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKT--- 171

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             G      C G L+DM ++  YL DA+ V +
Sbjct: 172 --GFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/698 (29%), Positives = 366/698 (52%), Gaps = 1/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   V+ G  +DI +   L+ M  +CG      + F   A+R++V +  +++A  Q
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ 307

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G      + Y  M+++G   N     S++  C +  A E G  IH    +     +  +
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ YA+ GD+  A  +FY++   D+  WNA+I GYA      EA+ +   M  EG+
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              + TF++ L  C+  + +  G+ IH  I+RS ++ +  + NAL++MY +   +  A  
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE    +DVISWN++  G +++ +      LF +       P+++TF+ +L  C     
Sbjct: 488 VFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEA 547

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+LG Q+       G   + N+ ++LI M+ RCG+++ A +VF ++ ++++ +W  ++ G
Sbjct: 548 LELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                 D   ++ F  +   G      TF  +++ C  S       ++   I+ +G+   
Sbjct: 608 CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELD 667

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI +Y   G + ++ E  +     D+ SW  +++     G    AV   + + E
Sbjct: 668 TGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQE 727

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
               P+++   ++LN+C++  A +  K +H  ++K     +V V +A+I  YAKCG    
Sbjct: 728 QDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGE 787

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A+  FD     N V+ +N +I AYA HGL S+A+  F+ M+   ++P  +TF S++SAC+
Sbjct: 788 AQEVFDNIIEKN-VVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACN 846

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLV +G  +F SM+S+YG+ P+ + YGCLV +L R    ++A+ +I  MPF P   V+
Sbjct: 847 HAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVW 906

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  CRIHGN  L E A+   L L  +N A ++LLS
Sbjct: 907 ETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLS 944



 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 184/696 (26%), Positives = 336/696 (48%), Gaps = 7/696 (1%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKS--LSLSEN-LKSRVL--GTQVHGHIVKLGFTND 78
           R  R CG ++    +  +  P    ++  ++L +N  + R+L    ++H  +V+     D
Sbjct: 2   RNERHCGPDREDVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPD 61

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           IFL N LI MY KC       +VF EM  R+++SW  ++S   Q G      +++ +M+ 
Sbjct: 62  IFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQN 121

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            GF+PN+    S++  C S    E G  IH   +K   +++P V  S+L+ Y K GD+  
Sbjct: 122 AGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPR 181

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A +VF  IS  DV  +N M+G YA   Y  E L +   M  EGI+ DK T+IN L   + 
Sbjct: 182 ARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTT 241

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
            +  D G++IH L +   +   I +  AL+ M ++   +D A + F+  AD+DV+ +N L
Sbjct: 242 PSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNAL 301

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
               +++ +  +    +++    G   N  T+  +L  C     L+ G  +       G 
Sbjct: 302 IAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGH 361

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  + ++LI M+ RCG +  A  +F  +  +++ +WN +++GY       + ++ +  
Sbjct: 362 SSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQ 421

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV+    TF +++  C  S        IH  I+++G  S G++ ++L+  Y   G 
Sbjct: 422 MQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGS 481

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           L  +     G +  D+ SW +M++     G    A  +F  +     +PD     ++L+ 
Sbjct: 482 LMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSG 541

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           C    A +  K IH  + + G   +V + +A+I+ Y +CG ++ AR  F  S    DV+ 
Sbjct: 542 CKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVF-HSLQHRDVMS 600

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +  +I   A  G   +A+E+F +M+    +P ++TF S++  C+    +D+G  +   + 
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYIL 660

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +  G +        L+   S++G + DA+ V + MP
Sbjct: 661 NS-GYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 169/678 (24%), Positives = 332/678 (48%), Gaps = 5/678 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I+K G+  D  +QN+L++MY KCG      +VF  ++ R++VS+  ++    Q
Sbjct: 147 GKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQ 206

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  L ++  M + G  P++    +++    +    + G  IH   ++  +  +  V
Sbjct: 207 KAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRV 266

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++    + GDV +A++ F   +  DV  +NA+I   A  G+  EA      M  +G+
Sbjct: 267 GTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGV 326

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +++ T+++ L  CS     + G+ IH  I        + I NALI MY +   +  A +
Sbjct: 327 ALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARE 386

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M  +D+ISWN +  G++  ++ G+   L+ +    G +P  VTF  LL  C     
Sbjct: 387 LFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSA 446

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G  +    L  G     ++ ++L+ M+ RCG++  A +VF+    +++ +WN +++G
Sbjct: 447 YADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAG 506

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +  +       K F  +    +E +  TF  V+  C   E  ++  QIHG I ++G    
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y+  G L ++    +  +  D+ SW AM+     QG + +A+ +F  +  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G +P +    +IL  C +       K +  +++  G+  +  V +A+I AY+K G +  
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD+   S D++ +N +I  YA +GL   A+E   +M+  ++ P++ +FVS+++ACS
Sbjct: 687 AREVFDK-MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
               +++G  +   +  +  +Q        L+ M ++ G   +A+ V + +  + +   +
Sbjct: 746 SFSALEEGKRVHAEI-VKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTW 803

Query: 723 RSLLSGCRIHG--NKELG 738
            ++++    HG  +K LG
Sbjct: 804 NAMINAYAQHGLASKALG 821



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 168/659 (25%), Positives = 306/659 (46%), Gaps = 18/659 (2%)

Query: 40  LRKDPIFLAKSLSLS-----ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +R D + L ++  LS        K+   G  +H HI + G ++D+ + N LI+MY++CG 
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                 +F  M +R+L+SW  I++   +  +    +++Y  M++ G  P       ++  
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C +  A   G  IH   L+  I+ N  +  +++N Y + G +  A+ VF    + DV  W
Sbjct: 441 CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISW 500

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N+MI G+A  G    A  +   M  E +  D  TF + L GC      ++G+QIHG I  
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S ++  +++ NALI+MYI+   +  A  VF  +  +DV+SW  + GG ++     +   L
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G RP   TFS +L+ C     LD G ++    L+ G+  +  V ++LI  + +
Sbjct: 621 FWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSK 680

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G++  A  VFD +  ++I +WN++++GY  N      ++    + E  V  N  +F  +
Sbjct: 681 SGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSL 740

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLD 513
           +  C      +   ++H  I+K        + ++LI  Y   G    + E F N  E+ +
Sbjct: 741 LNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEK-N 799

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----AYQRTK 569
           + +W AM++A    G   +A+  F+ + + G KPD     +IL++C   G     YQ   
Sbjct: 800 VVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFS 859

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           S+     + G    +     ++    +    + A    +Q     D  V+ TL+ A   H
Sbjct: 860 SMES---EYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIH 916

Query: 630 GLVSEAMEIFDK-MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           G ++ A    +  +KL    P  A ++ + +  +  G  D    + + M+ + G++  P
Sbjct: 917 GNIALAEHAANNALKLNARNP--AVYILLSNVYAAAGRWDDVAKIRRVMEGR-GIRKEP 972



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/514 (24%), Positives = 256/514 (49%), Gaps = 5/514 (0%)

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
           HCG   E  +V ++        ++ T++  LQ C+        ++IH  ++ + V   I 
Sbjct: 6   HCGPDRE--DVSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIF 63

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N LI+MY+K   +  A +VF+ M  +DVISWN+L   +++     +   LF +   +G
Sbjct: 64  LSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAG 123

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             PN +T+  +L  C    +L+ G ++    +  G+  +  V +SL+ M+ +CG +  A 
Sbjct: 124 FIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRAR 183

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            VF  +S +++ ++N +L  Y       + L  F  +   G+  +  T+  +++      
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
                 +IH   ++ G +S   + ++L+   V  G +D++ +   G    D+  + A+++
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIA 303

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           AL   GHN EA   ++ +   G   +     +ILN+C+   A +  K IH  + + G ++
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSS 363

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +V + +A+I  YA+CGD+  AR  F  +    D+I +N +I  YA      EAM ++ +M
Sbjct: 364 DVQIGNALISMYARCGDLPKARELF-YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +   ++P + TF+ ++SAC++      G ++ + +  + G++ +      L++M  R G 
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-LRSGIKSNGHLANALMNMYRRCGS 481

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           L +A++V E    +   + + S+++G   HG+ E
Sbjct: 482 LMEAQNVFEGTQARDVIS-WNSMIAGHAQHGSYE 514


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/703 (32%), Positives = 357/703 (50%), Gaps = 10/703 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    + G   ++++   L+ +Y   G      R+F EM ERN+VSWT ++ A   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L+ Y  M+  G   N  A  +V+ +C S+     G  +    +   ++    V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  +  LG V  AE++F  +   D    NAMI  Y+H G   +   V S M   G+
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T  + +  C+    F  G  IH L +RS ++ S++++NAL++MY  +  +  A  
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC---GK 359
           +F  M+ +D+ISWNT+   + +N N         +   +   PNH+TFS  L  C   G 
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L+D   G  +  + L         V +SLI M+ +C ++E A  VF ++   ++ ++N L
Sbjct: 363 LID---GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVL 419

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
           + GY         ++ F  I  +G++ N  T   +  +   S +    G+ +H  II+TG
Sbjct: 420 IGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTG 479

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  Y+ +SLI  Y   G L++S    N     ++ SW A+++A    GH  EA+ +F 
Sbjct: 480 FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFI 539

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +  AG K D   L   L+SCA++ + +    +H   +K G +++ YV +A +D Y KCG
Sbjct: 540 DMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCG 599

Query: 599 DIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            +    +M  DQ+        +NTLI  YA +G   EA E F +M     +P   TFV++
Sbjct: 600 KMNEMLQMVPDQAIRPQQ--CWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVAL 657

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH GLVDKG   + SM S +G+ P      C+VD+L R G   +A+  IE MP  P
Sbjct: 658 LSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLP 717

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  ++RSLLS  R H N E+G  A++KLL L P +D+A+VLLS
Sbjct: 718 NDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLS 760



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 156/635 (24%), Positives = 295/635 (46%), Gaps = 14/635 (2%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  +SL  +L++ V G QV  H++  G  N + + N+LI M+   G      ++FD M E
Sbjct: 149 ATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEE 208

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            + +S   ++S     G       ++ DM+ +G  P+   + S+M VC S      G  I
Sbjct: 209 HDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGI 268

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   L+  ++ +  V  +++N Y+  G ++ AE +F+++S  D+  WN MI  Y      
Sbjct: 269 HSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNS 328

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +AL  +  +       +  TF +AL  CS       G+ +H ++++  ++ ++ + N+L
Sbjct: 329 TDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSL 388

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           I MY K + M+ A KVF+ M   DV+S+N L GG++  ++  +   +F     +G +PN+
Sbjct: 389 ITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNY 448

Query: 348 VTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           +T   +        DL + G  L    +  GFL +E V +SLI M+ +CG +E + ++F+
Sbjct: 449 ITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFN 508

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           +++ KNI +WN +++         + LK F ++  +G +++       + +C    + + 
Sbjct: 509 SITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEE 568

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             Q+HG  +K+G  S  Y+ ++ +  Y   G+++   +            W  ++S    
Sbjct: 569 GMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAK 628

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVY 585
            G+  EA   F  +V  G KPD      +L++C+  G   +     +      G +  + 
Sbjct: 629 YGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIK 688

Query: 586 VASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGL------VSEAMEI 638
               ++D   + G    A R   +     ND+I  + L  +  H  L        + +E+
Sbjct: 689 HCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLEL 748

Query: 639 --FDK---MKLANLQPSQATFVSVMSACSHKGLVD 668
             FD    + L+NL  + A +V V    SH   ++
Sbjct: 749 DPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTIN 783



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 196/420 (46%), Gaps = 1/420 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D   L   +S+  +      G+ +H   ++    + + + N L+ MYS  G      
Sbjct: 242 LRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAE 301

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  M+ R+L+SW  ++S+ +QN      LK    +     +PN     S +  C S G
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPG 361

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  +H   L++ +++N  VG S++  Y K   +  AE+VF S+ + DV  +N +IG
Sbjct: 362 ALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIG 421

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF-DIGRQIHGLIIRSEVE 278
           GYA    G +A+ V S +   GI  +  T IN     +   D  + GR +H  IIR+   
Sbjct: 422 GYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFL 481

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               + N+LI MY K   ++ +  +F  + +K+++SWN +    ++  +  +   LF   
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDM 541

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             +G++ + V  +  L  C  L  L+ G+QL  L +  G   +  V ++ + M+ +CG +
Sbjct: 542 QHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKM 601

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
                +  + + +    WN L+SGY       +  +TF  +   G + +  TF  ++  C
Sbjct: 602 NEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSAC 661



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 29/174 (16%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA+ LS   +L S   G Q+HG  +K G  +D ++ N  + MY KCG     L++ 
Sbjct: 549 DRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMV 608

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--- 159
            + A R    W  ++S   + G F    + +  M   G  P+     +++  C   G   
Sbjct: 609 PDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVD 668

Query: 160 ---------ASEFGYSI---HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
                    AS FG S    HC                +++   +LG  A AER
Sbjct: 669 KGIDYYNSMASSFGVSPGIKHCVC--------------IVDLLGRLGRFAEAER 708


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/817 (27%), Positives = 402/817 (49%), Gaps = 85/817 (10%)

Query: 27  RLCGNNQFCSDSFLR-----------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF 75
           R+ G   + S+  L+            D    A +LS    L++  LG  VH  ++K G 
Sbjct: 19  RVQGTKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGL 78

Query: 76  TNDIFLQNNLIAMYSKC----------------------------GYFGWGL-----RVF 102
            +  F Q  LI +Y+KC                            GY   GL      +F
Sbjct: 79  ESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIF 138

Query: 103 DEMAE------------------------------------RNLVSWTLIVSAAIQNGEF 126
           D+M                                      RN+V+W +++S   +   +
Sbjct: 139 DKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHY 198

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
           +  L  +  M  +G   +   + SV+    S+ A   G  +H  A+K   E + +V  S+
Sbjct: 199 EEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSL 258

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           +N Y K      A +VF +IS  ++  WNAM+G Y+  G+    + +   M+  GI  D+
Sbjct: 259 INMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDE 318

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           +T+ + L  C+     ++GRQ+H  II+     ++ + NALIDMY K+  +  A K FE 
Sbjct: 319 FTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEH 378

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M  +D ISWN +  G+ + +      SLF + IL G  P+ V+ + +L  CG +  L+ G
Sbjct: 379 MTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAG 438

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            Q  CL++  G        SSLI M+ +CG ++ AH  + ++  +++ + N L++GY   
Sbjct: 439 QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK 498

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG--Y 484
               + +     +   G++ +  TF  +++ C  S    +  QIH AI+K G   CG  +
Sbjct: 499 NTK-ESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGL-LCGSEF 556

Query: 485 ICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           + +SL+  Y++  +L D +  FS  +    +  W A++S  +    +  A+ ++  + + 
Sbjct: 557 LGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDN 616

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              PD+    T+L +CA + +    + IH  +   GF+ +   +SA++D YAKCGD+K +
Sbjct: 617 NISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSS 676

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F++     DVI +N++I+ +A +G    A+++FD+M  + + P   TF+ V++ACSH
Sbjct: 677 VQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSH 736

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V +G  +F  M + YG++P  D Y C+VD+L R G+L++A+  I+ +  +P+  ++ 
Sbjct: 737 AGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWA 796

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL  CRIHG+++ G+ A++KL+ L P++ + +VLLS
Sbjct: 797 NLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLS 833



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 171/653 (26%), Positives = 310/653 (47%), Gaps = 9/653 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  LS   +L +   G  VH H +K GF + I++ ++LI MY KC       +VFD ++
Sbjct: 220 LASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS 279

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ++N++ W  ++    QNG     +++++DM + G  P+EF   S++  C      E G  
Sbjct: 280 QKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQ 339

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K R   N FV  ++++ YAK G +  A + F  ++  D   WNA+I GY     
Sbjct: 340 LHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEV 399

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
              A ++   M+ +GI  D+ +  + L  C  +   + G+Q H L ++  +E ++   ++
Sbjct: 400 EAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSS 459

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY K   +  A K +  M ++ V+S N L  G++  KN  ++ +L H+  + G +P+
Sbjct: 460 LIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYAL-KNTKESINLLHEMQILGLKPS 518

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            +TF+ L+  C     + LGLQ+ C  +  G L   E + +SL+ M+     +  A+ +F
Sbjct: 519 EITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILF 578

Query: 406 DNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
               S K+I  W  L+SG+  N C    L  +  + ++ +  +  TF  V++ C    + 
Sbjct: 579 SEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSL 638

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IH  I  TGF       S+L+  Y   G + +S + F   A + D+ SW +M+  
Sbjct: 639 HDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVG 698

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNT 582
               G+   A+ +F  + ++   PD+     +L +C+  G     + I   ++   G   
Sbjct: 699 FAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEP 758

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V   + ++D   + G +K A    D+     + +++  L+ A   HG   E        
Sbjct: 759 RVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHG--DEKRGQRAAK 816

Query: 643 KLANLQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           KL  L+P S + +V + +  +  G  D+   L ++M  +  +Q  P C   +V
Sbjct: 817 KLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKK-DIQKIPGCSWIVV 868



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 226/528 (42%), Gaps = 46/528 (8%)

Query: 214 WNAMIGGYAHCGYGFE-ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           WN  + G  H  Y  E  L   +S +  G + D++TF   L  C+ + +  +GR +H  +
Sbjct: 16  WNWRVQGTKH--YSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCV 73

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGGFSENKNPGQ 330
           I+S +E +     ALI +Y K + +  A  +F          +SW  L  G+ +   P +
Sbjct: 74  IKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHE 133

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +F K + + + P+ V    +L     L  LD   QL                     
Sbjct: 134 ALHIFDK-MRNSAVPDQVALVTVLNAYISLGKLDDACQL--------------------- 171

Query: 391 MFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
                         F    +  +N+  WN ++SG+       + L  F  + + GV+ + 
Sbjct: 172 --------------FQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSR 217

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            T   V+              +H   IK GF S  Y+ SSLI  Y      D++ +  + 
Sbjct: 218 STLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDA 277

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
             + +M  W AM+      G     + +F  ++  G  PDE+   +IL++CA     +  
Sbjct: 278 ISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVG 337

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           + +H  +IK  F + ++V +A+ID YAK G +K A   F+      D I +N +I+ Y  
Sbjct: 338 RQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEH-MTYRDHISWNAIIVGYVQ 396

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
             + + A  +F +M L  + P + +  S++SAC +  +++ G   F  +  + G++ +  
Sbjct: 397 EEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAG-QQFHCLSVKLGLETNLF 455

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
               L+DM S+ G ++DA      MP + S     +L++G  +   KE
Sbjct: 456 AGSSLIDMYSKCGDIKDAHKTYSSMP-ERSVVSVNALIAGYALKNTKE 502



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 184/409 (44%), Gaps = 43/409 (10%)

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V  WN    G +++ +  +    +  F+ SG  P+  TF++ L  C KL +L LG  +  
Sbjct: 13  VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT--WNELLSGYCFNCCD 429
             +  G         +LI+++ +C ++  A ++F +  + ++ T  W  L+SGY      
Sbjct: 72  CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            + L  F  +  S V                 +   +V                    ++
Sbjct: 132 HEALHIFDKMRNSAV----------------PDQVALV--------------------TV 155

Query: 490 IKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           + +Y++ G+LD++ +          ++ +W  M+S      H  EA+  FH + + G K 
Sbjct: 156 LNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKS 215

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
               L ++L++ A++ A      +H   IK GF + +YVAS++I+ Y KC     AR  F
Sbjct: 216 SRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVF 275

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D + +  ++IV+N ++  Y+ +G +S  ME+F  M    + P + T+ S++S C+    +
Sbjct: 276 D-AISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYL 334

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           + G  L  ++  +     +      L+DM ++ G L++A    E M ++
Sbjct: 335 EVGRQLHSAIIKKR-FTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYR 382


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 193/635 (30%), Positives = 343/635 (54%), Gaps = 9/635 (1%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L ++V +  +   P+E  +  V  +C      + G  +HC  +K  +  +  VG S+++
Sbjct: 77  ALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVD 136

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEGITMDKY 247
            Y K  +V    RVF  +   +V  W +++ GY+  G YG+    +   M +EG+  ++Y
Sbjct: 137 MYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGY-VWELFCQMQYEGVLPNRY 195

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T    +          IG Q+H ++++   E +I + N+LI +Y +   +  A  VF++M
Sbjct: 196 TVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKM 255

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             +D ++WN++  G+  N    +   +F+K  L+G +P H+TF+ +++ C  L +L L  
Sbjct: 256 EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVK 315

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYCFN 426
            +QC AL  GF  ++ V ++L+    +C  ++ A S+F  +   KN+ +W  ++SG   N
Sbjct: 316 LMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQN 375

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
             +   +  F  +   GV+ N  T+  ++           V ++H  +IKT +     + 
Sbjct: 376 GGNDQAVNLFSQMRREGVKPNHFTYSAILTV----HYPVFVSEMHAEVIKTNYERSSSVG 431

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+ +YV  G   ++ +     E  D+ +W AM++     G   EA  +FH L++ G K
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491

Query: 547 PDEYILGTILNSCAA-IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           P+E+   +++N+CA+   A ++ K  H + IK+  N  + V+SA++  YAK G+I  A  
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F +     D++ +N++I  Y+ HG   +A+E+FD+M+  N+     TF+ V++AC+H G
Sbjct: 552 VFKRQ-KERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAG 610

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV+KG   F SM + + + P+   Y C++D+ SR G LE A  +I  MPF P  TV+R+L
Sbjct: 611 LVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTL 670

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L   R+H N ELGE A+EKL+ L P++ AA+VLLS
Sbjct: 671 LGAARVHRNVELGELAAEKLISLQPEDSAAYVLLS 705



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/601 (24%), Positives = 274/601 (45%), Gaps = 9/601 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH   VK G  + + +  +L+ MY K      G RVFDEM ERN+VSWT +++   
Sbjct: 111 LGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYS 170

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG +    +++  M+  G +PN + V +V+   V+ G    G  +H   +K   E+   
Sbjct: 171 WNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIP 230

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y++LG +  A  VF  +   D   WN+MI GY   G   E   + + M   G
Sbjct: 231 VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +     TF + ++ C+ + +  + + +    ++S       ++ AL+    K   MD A 
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDAL 350

Query: 302 KVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +F  M + K+V+SW  +  G  +N    Q  +LF +    G +PNH T+S +L     +
Sbjct: 351 SLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPV 410

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              ++  ++    +   +    +V ++L+  + + G    A  VF+ +  K++  W+ +L
Sbjct: 411 FVSEMHAEV----IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAML 466

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGF 479
           +GY       +  K F  + + G++ N  TF  V+  C         G Q H   IK   
Sbjct: 467 AGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRL 526

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           ++   + S+L+  Y   G +D++ E     +  D+ SW +M+S     G   +A+ +F  
Sbjct: 527 NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDE 586

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           + +     D      ++ +C   G  ++  K  +  +     N  +   S +ID Y++ G
Sbjct: 587 MQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAG 646

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A    ++        V+ TL+ A   H  V E  E+  + KL +LQP  +    ++
Sbjct: 647 MLEKAMGIINEMPFPPGATVWRTLLGAARVHRNV-ELGELAAE-KLISLQPEDSAAYVLL 704

Query: 659 S 659
           S
Sbjct: 705 S 705



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 254/521 (48%), Gaps = 7/521 (1%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N ++  Y+      EALN+  S+L   +  D+ T       C+   D  +GRQ+H   ++
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVK 121

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +   +S+  +L+DMY+K+  ++   +VF+ M +++V+SW +L  G+S N   G    L
Sbjct: 122 FGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWEL 181

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G  PN  T S ++        + +GLQ+  + +  GF +   V +SLI ++ R
Sbjct: 182 FCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSR 241

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G +  A  VFD +  ++  TWN +++GY  N  D +V + F  +  +GV+    TF  V
Sbjct: 242 LGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASV 301

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLD 513
           +++C       +V  +    +K+GF++   + ++L+ +     ++D++   FS   E  +
Sbjct: 302 IKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKN 361

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           + SW AM+S  +  G N +AV +F  +   G KP+ +    IL     +   +    +H 
Sbjct: 362 VVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSE----MHA 417

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            VIK  +     V +A++DAY K G+   A   F +   + D++ ++ ++  YA  G   
Sbjct: 418 EVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF-EIIEAKDLMAWSAMLAGYAQTGETE 476

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           EA ++F ++    ++P++ TF SV++AC+      +    F +   +  +  +      L
Sbjct: 477 EAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSAL 536

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           V M ++ G ++ A  V +    +     + S++SG   HG 
Sbjct: 537 VTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQ 576



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 130/270 (48%), Gaps = 3/270 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V  +++H  ++K  +     +   L+  Y K G     ++VF+ +  ++L++W+ +++  
Sbjct: 410 VFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGY 469

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKN 179
            Q GE +   K++  +   G  PNEF   SV+  C S   A+E G   H +A+K+R+   
Sbjct: 470 AQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNA 529

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  +++  YAK G++ +A  VF      D+  WN+MI GY+  G   +AL V   M  
Sbjct: 530 LCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             + +D  TFI  +  C+     + G++  + +I    +  ++   + +ID+Y ++  ++
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649

Query: 299 YAFKVFERMA-DKDVISWNTLFGGFSENKN 327
            A  +   M        W TL G    ++N
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRN 679


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 223/730 (30%), Positives = 353/730 (48%), Gaps = 75/730 (10%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--------------------------- 102
           ++  G   D FL N L+ +YS  G     LR F                           
Sbjct: 34  VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93

Query: 103 ----DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
               DEM +RN+VSW  +++A  ++      L++Y  M   G +P  F + SV+  C ++
Sbjct: 94  RALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAV 153

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A + G   H  A+K+ +++N FV  ++L  Y K G V  A R+F  ++S +   + AM+
Sbjct: 154 AALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMM 213

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS--------LVADFDIGRQIHG 270
           GG    G   +AL + + M   G+ +D     + L  C+        +V  F +G+ IH 
Sbjct: 214 GGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHA 273

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           LI+R        + N+LIDMY K   MD A KVF+ + +   +SWN L  GF +  +  +
Sbjct: 274 LIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAK 333

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              + +    SGS PN VT+S +L  C K  D                            
Sbjct: 334 ALEVLNLMEESGSEPNEVTYSNMLASCIKARD---------------------------- 365

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
                  V  A ++FD +S  ++TTWN LLSGYC      D ++ F  +    V+ +  T
Sbjct: 366 -------VLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTT 418

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              ++ +C R     +  Q+H A ++    +  ++ S L+  Y   GQ+  +    N   
Sbjct: 419 LAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMT 478

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+  W +M+S L     N EA   F  +   G  P E    +++NSCA + +  + + 
Sbjct: 479 ERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQ 538

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           IH  ++K G++  VYV SA+ID YAKCG++  AR+ FD     N ++ +N +I  YA +G
Sbjct: 539 IHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKN-IVAWNEMIHGYAQNG 597

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +A+++F+ M     +P   TF++V++ CSH GLVD+    F SM+S YG+ P  + Y
Sbjct: 598 FGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHY 657

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            CL+D L R G L + + +I+ MP +  P V+  LL+ C +H N ELGE A++ L  L P
Sbjct: 658 TCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDP 717

Query: 751 KNDAAHVLLS 760
           KN + +VLLS
Sbjct: 718 KNPSPYVLLS 727



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 113/218 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L    LGTQVH   V+    ND+F+ + L+ MYSKCG  G   
Sbjct: 412 VQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 471

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ M ER++V W  ++S    +   +     +  M+ NG MP E +  S++  C  + 
Sbjct: 472 IIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLS 531

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  IH   +K   ++N +VG ++++ YAK G++  A   F  + + ++  WN MI 
Sbjct: 532 SVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIH 591

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GYA  G+G +A+++   ML      D  TFI  L GCS
Sbjct: 592 GYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCS 629



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S   G Q+H  IVK G+  ++++ + LI MY+KCG        FD M  +N+V+W  +
Sbjct: 530 LSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEM 589

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +    QNG  +  + ++  M T    P+     +V+  C   G
Sbjct: 590 IHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSG 632


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 217/739 (29%), Positives = 380/739 (51%), Gaps = 14/739 (1%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           SL  S+ LK    G  VH  I+K+G  +D++L NNL+ +Y+KC   G    +FDEM  R+
Sbjct: 25  SLCNSQTLKE---GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRD 81

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +VSWT ++SA  +N      L+++  M  +G  PNEF + S ++ C ++G  EFG  IH 
Sbjct: 82  VVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHA 141

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +K+ +E N  +G ++++ Y K        ++   +   DV  W  MI          E
Sbjct: 142 SVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSE 201

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALI 288
           AL +   M+  GI  +++TF+  L   S +      G+ +H  +I   VE ++ +  A+I
Sbjct: 202 ALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAII 261

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   M+ A KV ++    DV  W ++  GF +N    +  +      LSG  PN+ 
Sbjct: 262 CMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNF 321

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG-AVEMAHSVFDN 407
           T++ LL     +L L+LG Q     +  G   +  V ++L+ M+ +C          F  
Sbjct: 322 TYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRG 381

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++  N+ +W  L++G+  +  + + ++ F  +  +GV+ N  T   ++  C + ++    
Sbjct: 382 IALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQT 441

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            ++HG IIKT       + ++L+ +Y   G  D ++         D+ ++  + + L  Q
Sbjct: 442 KKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQ 501

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G +  A+ +   +     K DE+ L + +++ A +G  +  K +H +  K GF     V+
Sbjct: 502 GDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVS 561

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           ++++ +Y+KCG ++ A   F +     D + +N LI   A +GL+S+A+  FD M+LA +
Sbjct: 562 NSLVHSYSKCGSMRDAYRVF-KDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGV 620

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P   TF+S++ ACS   L+++G   F SM+  Y + P  D Y CLVD+L R G LE+A 
Sbjct: 621 KPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAM 680

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQRE 767
            VIE MPF+P   +Y++LL+ C +HGN  LGE  + + L L P + A ++LL+       
Sbjct: 681 GVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLA------- 733

Query: 768 GNLLDHEGVCNVNDGIKTV 786
            +L D+ G+ +  D  + +
Sbjct: 734 -SLYDNAGLPDFGDKTRKL 751



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 151/638 (23%), Positives = 286/638 (44%), Gaps = 25/638 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  +VKLG   +  L   L+ +Y+KC       ++   + + ++VSWT ++S+ ++
Sbjct: 136 GAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-FGYSIHCFALKIRIEKNPF 181
             ++   L++YV M   G  PNEF    ++ +   +G  + +G  +H   +   +E N  
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  +++  YAK   +  A +V       DV  W ++I G+       EA+N +  M   G
Sbjct: 256 LKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSG 315

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK-SSGMDYA 300
           I  + +T+ + L   S V   ++G Q H  +I   +E  I + NAL+DMY+K S      
Sbjct: 316 ILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNG 375

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K F  +A  +VISW +L  GF+E+    ++  LF +   +G +PN  T S +L  C K+
Sbjct: 376 VKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKM 435

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             +    +L    +      +  V ++L+  +   G  + A SV   +++++I T+  L 
Sbjct: 436 KSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLA 495

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +           L+   ++    V+++  +    +         +   Q+H    K+GF 
Sbjct: 496 ARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFE 555

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            C  + +SL+ SY   G + +++         D  SW  ++S L   G   +A++ F  +
Sbjct: 556 RCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDM 615

Query: 541 VEAGEKPDEYILGTILNSCAA----------IGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             AG KPD     +++ +C+             + ++T  I P         + YV   +
Sbjct: 616 RLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITP-------KLDHYV--CL 666

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQP 649
           +D   + G ++ A    +      D ++Y TL+ A   HG V    ++  + ++L    P
Sbjct: 667 VDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDP 726

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             A ++ + S   + GL D G    K M  + G++ SP
Sbjct: 727 --AIYLLLASLYDNAGLPDFGDKTRKLM-RERGLRRSP 761



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 180/374 (48%), Gaps = 18/374 (4%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW-GLRVFDEMA 106
           A  L+ S ++ S  LG Q H  ++ +G   DI++ N L+ MY KC +    G++ F  +A
Sbjct: 324 ASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIA 383

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             N++SWT +++   ++G  +  ++++ +M+  G  PN F + +++  C  M +      
Sbjct: 384 LPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKK 443

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H + +K +++ +  VG ++++ YA  G    A  V   ++  D+  +  +       G 
Sbjct: 444 LHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGD 503

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
              AL V++ M  + + MD+++  + +   + +   + G+Q+H    +S  E   S+ N+
Sbjct: 504 HEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNS 563

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+  Y K   M  A++VF+ + + D +SWN L  G + N       S F    L+G +P+
Sbjct: 564 LVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPD 623

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE---NVTSSLIYMFC------RCGA 397
            VTF  L+  C +   L+ GL          F   E   ++T  L +  C      R G 
Sbjct: 624 SVTFLSLIFACSQGSLLNQGLDY--------FYSMEKTYHITPKLDHYVCLVDLLGRGGR 675

Query: 398 VEMAHSVFDNVSYK 411
           +E A  V + + +K
Sbjct: 676 LEEAMGVIETMPFK 689



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 2/275 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+  L     +KS +   ++HG+I+K     D+ + N L+  Y+  G       V   M 
Sbjct: 425 LSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMN 484

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+++++T + +   Q G+ +M L++   M  +    +EF++ S +     +G  E G  
Sbjct: 485 HRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQ 544

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC++ K   E+   V  S+++ Y+K G +  A RVF  I+  D   WN +I G A  G 
Sbjct: 545 LHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGL 604

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVN 285
             +AL+    M   G+  D  TF++ +  CS  +  + G    + +     +   +    
Sbjct: 605 ISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYV 664

Query: 286 ALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF 319
            L+D+  +   ++ A  V E M  K D + + TL 
Sbjct: 665 CLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLL 699



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 132/280 (47%), Gaps = 10/280 (3%)

Query: 456 ETC------CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-FGQLDNSFEFSNG 508
           ETC      C S+  +    +H  IIK G     Y+ ++L+  Y   FG       F   
Sbjct: 18  ETCLQVLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEM 77

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
             R D+ SW  ++SA     H+ EA+ +F  ++ +G+ P+E+ L + L SC+A+G ++  
Sbjct: 78  PHR-DVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFG 136

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
             IH  V+KLG      + + ++D Y KC D               DV+ + T+I +   
Sbjct: 137 AKIHASVVKLGLELNHVLGTTLVDLYTKC-DCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
               SEA++++ KM  A + P++ TFV ++   S  GL      +  S    +G++ +  
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
               ++ M ++   +EDA  V +  P +    ++ S++SG
Sbjct: 256 LKTAIICMYAKCRRMEDAIKVSQQTP-KYDVCLWTSIISG 294



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
              C+D  ++ D   LA  +S +  L     G Q+H +  K GF     + N+L+  YSK
Sbjct: 512 THMCNDE-VKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSK 570

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      RVF ++ E + VSW  ++S    NG     L  + DM+  G  P+     S+
Sbjct: 571 CGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSL 630

Query: 152 MKVC 155
           +  C
Sbjct: 631 IFAC 634


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 214/712 (30%), Positives = 377/712 (52%), Gaps = 4/712 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           L L  + K+   G QVH H++      N +FL   L+ MY KCG      ++FD M  + 
Sbjct: 121 LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKT 180

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           + +W  ++ A + NGE    L++Y +M+ +G   +      ++K C  +     G  +H 
Sbjct: 181 IFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHG 240

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGF 228
            A+K       FV  S++  Y K  D+  A ++F  +   +DV  WN+MI  Y+  G   
Sbjct: 241 LAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSI 300

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL +   M    +  + YTF+ ALQ C   +    G  IH  +++S    ++ + NALI
Sbjct: 301 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 360

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY +   M  A  +F  M D D ISWN++  GF +N    +    +H+   +G +P+ V
Sbjct: 361 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 420

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
               ++    +  +   G+Q+   A+  G   +  V +SL+ M+ +  +++    +FD +
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 480

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             K++ +W  +++G+  N   +  L+ F  +   G++++      ++  C   +    V 
Sbjct: 481 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 540

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IH  II+ G S    + + ++  Y   G +D +       E  D+ SW +M+S  VH G
Sbjct: 541 EIHSYIIRKGLSDL-VLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNG 599

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             +EA+ +FH + E G +PD   L +IL++ A++ A ++ K IH F+I+ GF  E  +AS
Sbjct: 600 LANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAS 659

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            ++D YA+CG ++ +R  F+    + D++++ ++I AY  HG    A+++F +M+  ++ 
Sbjct: 660 TLVDMYARCGTLEKSRNVFN-FIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P    FV+V+ ACSH GL+++G    +SM  +Y ++P P+ Y CLVD+L R  +LE+A  
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQ 778

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++ M  +P+  V+ +LL  C+IH NKELGE A++KLL + P+N   +VL+S
Sbjct: 779 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVS 830



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 156/321 (48%), Gaps = 1/321 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+  + D + +   ++ S    + + G Q+H + +K G  +D+ + N+L+ MY+K     
Sbjct: 412 DAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMK 471

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +   +FD+M ++++VSWT I++   QNG     L+++ +++  G   +   + S++  C 
Sbjct: 472 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 531

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +        IH + ++  +  +  +   +++ Y + G+V  A R+F  I   DV  W +
Sbjct: 532 GLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTS 590

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI  Y H G   EAL +   M   G+  D  + ++ L   + ++    G++IHG +IR  
Sbjct: 591 MISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKG 650

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                S+ + L+DMY +   ++ +  VF  + +KD++ W ++   +  +        LF 
Sbjct: 651 FVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 710

Query: 337 KFILSGSRPNHVTFSILLRQC 357
           +       P+H+ F  +L  C
Sbjct: 711 RMEDESIAPDHIAFVAVLYAC 731


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 210/709 (29%), Positives = 361/709 (50%), Gaps = 17/709 (2%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S + G  +H H++K G       +N+L++ YSKC   G   RVFDE+ +   VSW+ +V
Sbjct: 18  QSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +A   N      L  +  M++     NEF +  V+K     G   FG  +H  A+   + 
Sbjct: 76  TAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHALAMATGLG 132

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC------WNAMIGGYAHCGYGFEAL 231
            + FV  +++  Y   G V  A  VF     D+ GC      WN ++  Y        A+
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARMVF-----DEAGCERNTVSWNGLMSAYVKNDRCSHAV 187

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            V   M++ G+  +++ F   +  C+   D + GR++H ++IR+  +  +   NAL+DMY
Sbjct: 188 KVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMY 247

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A  VF ++ + DV+SWN    G   + +      L  +   SG  PN  T S
Sbjct: 248 SKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLS 307

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L+ C      +LG Q+    +      +  +   L+ M+ + G ++ A  VFD +  +
Sbjct: 308 SILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQR 367

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++  WN L+SG       A+ L  FC + + G +VN  T   V+++    E      Q+H
Sbjct: 368 DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVH 427

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
               K GF S  ++ + LI SY     L+ ++         D+ ++ +M++AL    H  
Sbjct: 428 ALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGE 487

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+ +F  ++  G  PD ++L ++LN+CA++ AY++ K +H  +IK  F ++V+  +A++
Sbjct: 488 DAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALV 547

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             YAKCG I+ A +AF        V+ ++ +I   A HG    A+++F +M   ++ P+ 
Sbjct: 548 YTYAKCGSIEDADLAF-SGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            T  SV+ AC+H GLVD+    F SM   +G++ + + Y C++D+L R G L+DA  ++ 
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            MPFQ +  V+ +LL+  R+H + ELG  A+EKL +L P+    HVLL+
Sbjct: 667 SMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLA 715



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 2/284 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  L  + +L++     QVH    KLGF +D  + N LI  Y KC    +  RVF++  
Sbjct: 407 LAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHG 466

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             +++++T +++A  Q    +  +K++++M   G  P+ F + S++  C S+ A E G  
Sbjct: 467 SYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQ 526

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   + F G +++  YAK G +  A+  F  +    V  W+AMIGG A  G+
Sbjct: 527 VHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGH 586

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD-IGRQIHGLIIRSEVECSISIVN 285
           G  AL+V   M+ E I+ +  T  + L  C+     D   R  + +     +E +     
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYA 646

Query: 286 ALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNP 328
            +ID+  ++  +D A ++   M    +   W  L      +++P
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDP 690



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 57/120 (47%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F +D+F  N L+  Y+KCG      
Sbjct: 501 LDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDAD 560

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + E+ +VSW+ ++    Q+G     L ++  M      PN   + SV+  C   G
Sbjct: 561 LAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAG 620


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 220/707 (31%), Positives = 372/707 (52%), Gaps = 3/707 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NLKS   G  +H  I+KLG  + ++L NNL+++YSKC       + FDEM  R++VSWT 
Sbjct: 31  NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVSWTG 90

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I+SA I+N   +  L ++  M  +G  PN F   S+++ C ++G   +G  IH  ++K  
Sbjct: 91  ILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIHASSIKHG 150

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E N  +G S+++ Y++      A ++F  + S D   W  +I      G    AL +  
Sbjct: 151 FESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHALRIYM 210

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            ML   ++ +++TF+  L   S +     G+ IH   I   V+ ++ +  AL++MY +  
Sbjct: 211 EMLEAQVSSNEFTFVRLLAASSFIG-LQYGKLIHAHAIVLGVKLNLVLKTALVNMYSRCQ 269

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A KV +   + DVI W  +  G ++N    +  + FHK  +SG   ++ T+  +L 
Sbjct: 270 RIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLS 329

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA-VEMAHSVFDNVSYKNIT 414
            C  +L LDLG Q+    +  G  D+  V ++L+ M+ +C   VE    +F  +   N+ 
Sbjct: 330 VCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVI 389

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  L++G+  +    D L  F  +   GV+ N  T   V+  C   ++     ++HG I
Sbjct: 390 SWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHI 449

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           IKT       + ++L+ +Y   G++D+++       + D  ++ ++ + L   G++  A+
Sbjct: 450 IKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHELAL 509

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           ++   +  A  K D + L    ++ A++G  +  K +H + +K G +  + VA+ +ID Y
Sbjct: 510 SVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLY 569

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            K G +  AR AF +     DV+ +N LI   A +G +S A+  FD M+L  +QP   TF
Sbjct: 570 GKYGLVHEARRAFTE-ITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITF 628

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + V+S CSH GLVD G   F SM   + ++P  D Y CLVD+L R G LE+A ++IE MP
Sbjct: 629 LLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMP 688

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            +P  ++Y++LL+ C IH N  LGE  + + L L P + A H+LL K
Sbjct: 689 LEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVK 735



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 165/319 (51%), Gaps = 1/319 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG-YFGWGLRVFDEMAERN 109
           LS+  ++ S  LG Q+H  +++ G  +D+ + N L+ MY KC      GLR+F  +   N
Sbjct: 328 LSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIKSPN 387

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           ++SWT +++   ++G     L ++++M+T G  PN F +  V++VC ++ +      +H 
Sbjct: 388 VISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHG 447

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +K + + +  VG ++++ YA  G V  A RV   ++  D   + ++       GY   
Sbjct: 448 HIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGYHEL 507

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL+V+S M    + +D ++        + +   + G+Q+H   ++S + C +S+ N LID
Sbjct: 508 ALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANGLID 567

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           +Y K   +  A + F  + + DV+SWN L  G + N +     S F    L G +P+ +T
Sbjct: 568 LYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRGIQPDSIT 627

Query: 350 FSILLRQCGKLLDLDLGLQ 368
           F ++L  C     +D+GLQ
Sbjct: 628 FLLVLSTCSHGGLVDMGLQ 646



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 33/217 (15%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S S +L     G Q+H + +K G +  + + N LI +Y K G      R F E+ E ++V
Sbjct: 532 SASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVV 591

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SW  ++S    NG     L  + DM+  G  P+      V+  C   G  + G       
Sbjct: 592 SWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMG------- 644

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
                          L ++  + ++   E       SD   C   ++G     G   EA+
Sbjct: 645 ---------------LQYFHSMREMHDVEP-----QSDHYVCLVDILG---RAGRLEEAM 681

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           N++ +M  E    D   +   L  CS+  + ++G  +
Sbjct: 682 NIIETMPLEP---DASIYKTLLAACSIHRNMNLGEDV 715


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 182/547 (33%), Positives = 302/547 (55%), Gaps = 1/547 (0%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W   I GY   G+  +AL +   M   GI  DK  F++ ++ C   +D   GR++H  II
Sbjct: 88  WKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDII 147

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
               E  + +  AL  MY K   ++ A +VF+RM  +DV+SWN +  G+S+N  P +  +
Sbjct: 148 ARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALA 207

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF +  ++G +PN  T   ++  C  LL L+ G Q+ C A+  G   +  V + L+ M+ 
Sbjct: 208 LFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYA 267

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG V  AH +F+ +  +++ +WN ++ GY  N    + L  F  +   G++ N  T   
Sbjct: 268 KCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVS 327

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           V+  C      +   QIHG  I++GF S   + ++L+  Y   G ++++++      + +
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKN 387

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           + +W A++S     GH HEA+ +F  +   G KPD + + ++L +CA   A ++ K IH 
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHG 447

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           + I+ GF + V V + ++D YAKCG++  A+  F++     DV+ + T+I+AY  HG   
Sbjct: 448 YTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER-MPEQDVVSWTTMILAYGIHGHGE 506

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           +A+ +F KM+    +     F ++++ACSH GLVD+G   F+ M S YG+ P  + Y CL
Sbjct: 507 DALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACL 566

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R G+L++A  +I+ M  +P   V+ +LL  CRIH N ELGE A++ L  L P N 
Sbjct: 567 VDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNA 626

Query: 754 AAHVLLS 760
             +VLLS
Sbjct: 627 GYYVLLS 633



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 216/399 (54%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH  I+  GF +D+ +   L +MY+KCG      +VFD M +R++VSW  I++   Q
Sbjct: 139 GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQ 198

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+    L ++ +M+ NG  PN   + SVM VC  + A E G  IHC+A++  IE +  V
Sbjct: 199 NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLV 258

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              ++N YAK G+V  A ++F  +   DV  WNA+IGGY+      EAL   + M   GI
Sbjct: 259 VNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGI 318

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  T ++ L  C+ +   + G+QIHG  IRS  E +  + NAL++MY K   ++ A+K
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FERM  K+V++WN +  G+S++ +P +  +LF +    G +P+      +L  C   L 
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLA 438

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+    +  GF     V + L+ ++ +CG V  A  +F+ +  +++ +W  ++  
Sbjct: 439 LEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILA 498

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           Y  +    D L  F  + E+G +++   F  ++  C  +
Sbjct: 499 YGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHA 537



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 228/455 (50%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           N V W   +   ++NG ++  L++Y  M+  G  P++    SV+K C S    + G  +H
Sbjct: 84  NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVH 143

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              +    E +  VG ++ + Y K G +  A +VF  +   DV  WNA+I GY+  G  +
Sbjct: 144 EDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPY 203

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL + S M   GI  +  T ++ +  C+ +   + G+QIH   IRS +E  + +VN L+
Sbjct: 204 EALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLV 263

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY K   ++ A K+FERM  +DV SWN + GG+S N    +  + F++  + G +PN +
Sbjct: 264 NMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSI 323

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T   +L  C  L  L+ G Q+   A+  GF   + V ++L+ M+ +CG V  A+ +F+ +
Sbjct: 324 TMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM 383

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             KN+  WN ++SGY  +    + L  F  +   G++ +      V+  C      +   
Sbjct: 384 PKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           QIHG  I++GF S   + + L+  Y   G ++ + +        D+ SW  M+ A    G
Sbjct: 444 QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           H  +A+ +F  + E G K D      IL +C+  G
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAG 538



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 196/372 (52%), Gaps = 3/372 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H + ++ G  +D+ + N L+ MY+KCG      ++F+ M  R++ SW  I+     
Sbjct: 240 GKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSL 299

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N +    L  +  M+  G  PN   + SV+  C  + A E G  IH +A++   E N  V
Sbjct: 300 NSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVV 359

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++N YAK G+V +A ++F  +   +V  WNA+I GY+  G+  EAL +   M  +GI
Sbjct: 360 GNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI 419

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +  ++ L  C+     + G+QIHG  IRS  E ++ +   L+D+Y K   ++ A K
Sbjct: 420 KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FERM ++DV+SW T+   +  + +     +LF K   +G++ +H+ F+ +L  C     
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGL 539

Query: 363 LDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           +D GLQ  QC+    G   +    + L+ +  R G ++ A+ +  N+S + +   W  LL
Sbjct: 540 VDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALL 599

Query: 421 SGYCFNCCDADV 432
            G C   C+ ++
Sbjct: 600 -GACRIHCNIEL 610



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 142/291 (48%), Gaps = 16/291 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + I +   L    +L +   G Q+HG+ ++ GF ++  + N L+ MY+KCG      
Sbjct: 318 IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAY 377

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F+ M ++N+V+W  I+S   Q+G     L ++++M+  G  P+ FA+ SV+  C    
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFL 437

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A E G  IH + ++   E N  VG  +++ YAK G+V  A+++F  +   DV  W  MI 
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMIL 497

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HGLI 272
            Y   G+G +AL + S M   G  +D   F   L  CS     D G Q        +GL 
Sbjct: 498 AYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLA 557

Query: 273 IRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
            + E   C       L+D+  ++  +D A  + + M+ + D   W  L G 
Sbjct: 558 PKLEHYAC-------LVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 112/220 (50%), Gaps = 10/220 (4%)

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           N  +F+    R +   W   +   V  G  ++A+ +++ +   G  PD+ +  +++ +C 
Sbjct: 72  NQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACG 131

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           +    Q  + +H  +I  GF ++V V +A+   Y KCG ++ AR  FD+     DV+ +N
Sbjct: 132 SQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDR-MPKRDVVSWN 190

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKS 676
            +I  Y+ +G   EA+ +F +M++  ++P+ +T VSVM  C+H   +++G    C   +S
Sbjct: 191 AIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS 250

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
                G++        LV+M ++ G +  A  + E MP +
Sbjct: 251 -----GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIR 285


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 205/729 (28%), Positives = 373/729 (51%), Gaps = 32/729 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD------------------- 103
           G Q H  ++  GF    F+ N L+ MY KC Y  +  +VFD                   
Sbjct: 68  GKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYAS 127

Query: 104 ------------EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
                       EM ER++VSW  ++S  +QNGE    + ++++M   G   +  ++  V
Sbjct: 128 CGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVV 187

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C ++   + G  +H   +K   + +   G ++L  YAK   +  +  VF  +   + 
Sbjct: 188 LKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNW 247

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W+AMI G        E L +   M   G+ + +  + +  + C+ ++   +G+++H  
Sbjct: 248 VSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSH 307

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            ++S     I +  A +DMY K   M  A KV   M    + S+N +  G++ +    Q 
Sbjct: 308 ALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQA 367

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
              F   + +G   + +T S  L  C  +     G Q+  LA+    +    V ++++ M
Sbjct: 368 LKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDM 427

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C A+  A  +FD +  ++  +WN +++    N  + + L  F ++  S +E +  T+
Sbjct: 428 YGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTY 487

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C   +      +IH  IIK+G     ++ ++L+  Y   G ++ + +  +  E+
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
             M SW A++S       + +A   F  ++E G  PD +    +L++CA +      K I
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  +IK    ++VY+ S ++D Y+KCG+++ +++ F+++ N  D + +N ++  YAHHGL
Sbjct: 608 HAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPN-RDFVTWNAMLCGYAHHGL 666

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+++F+ M+L N++P+ ATFVSV+ AC+H GLVDKG   F  M S+YG+ P  + Y 
Sbjct: 667 GEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYS 726

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R+G +++A ++++ MPF+    ++R+LLS C+IHGN E+ E A+  LL L P+
Sbjct: 727 CMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQ 786

Query: 752 NDAAHVLLS 760
           + +A VLLS
Sbjct: 787 DSSACVLLS 795



 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 176/590 (29%), Positives = 289/590 (48%), Gaps = 9/590 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVHG +VK GF  D+   + L+ MY+KC      L VF E+ E+N VSW+ +++  +
Sbjct: 199 MGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCV 258

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN     GL+++ +M+  G   ++    S+ + C ++ A   G  +H  ALK     +  
Sbjct: 259 QNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDII 318

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG + L+ YAK G +A A++V  S+    +  +NA+I GYA    GF+AL     +L  G
Sbjct: 319 VGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTG 378

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ T   AL  C+ +     GRQ+HGL ++S    +I + NA++DMY K   +  A 
Sbjct: 379 LGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEAS 438

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ M  +D +SWN +     +N N  +T + F   I S   P+  T+  +L+ C    
Sbjct: 439 DLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQ 498

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G+++    +  G   +  V ++L+ M+C+CG +E A  + D    K + +WN ++S
Sbjct: 499 ALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIIS 558

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+       D  K F  + E GV  +  T+  V++TC       +  QIH  IIK    S
Sbjct: 559 GFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQS 618

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             YICS+L+  Y   G + +S      A   D  +W AM+    H G   EA+ +F S+ 
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQ 678

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL---GFNTEVYVASAVIDAYAKCG 598
               KP+     ++L +CA +G     K +H F + L   G + +    S ++D   + G
Sbjct: 679 LVNVKPNHATFVSVLRACAHMGLVD--KGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSG 736

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            I  A     +     D +++  L+     HG V    E+ +K   A LQ
Sbjct: 737 RIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNV----EVAEKATRALLQ 782



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 120/512 (23%), Positives = 235/512 (45%), Gaps = 34/512 (6%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER- 306
           TF +  Q CS     + G+Q H  +I    E +  + N L+ MYIK   +DYA KVF++ 
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 307 ------------------------------MADKDVISWNTLFGGFSENKNPGQTASLFH 336
                                         M ++DV+SWN++  GF +N    ++  +F 
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +    G   +  + +++L+ CG L + D+G+Q+  L +  GF  +    S+L+ M+ +C 
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCK 230

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++ + SVF  +  KN  +W+ +++G   N  + + L+ F  +   GV V+   +  +  
Sbjct: 231 RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFR 290

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +C      ++  ++H   +K+ F S   + ++ +  Y   G++ ++ +  +   +  + S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           + A++          +A+  F  L++ G   DE  L   LN+CA+I      + +H   +
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K    + + VA+A++D Y KC  +  A   FD      D + +N +I A   +G   E +
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDM-MERRDAVSWNAIIAACEQNGNEEETL 469

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
             F  M  + ++P   T+ SV+ AC+ +  ++ G  +   +  + GM         LVDM
Sbjct: 470 AHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRI-IKSGMGFDSFVGAALVDM 528

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             + G +E A  + +    Q +   + +++SG
Sbjct: 529 YCKCGMIEKADKIHDRTE-QKTMVSWNAIISG 559



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 190/422 (45%), Gaps = 40/422 (9%)

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TFS + ++C K   L+ G Q     + CGF     V++ L+ M+ +C  ++ A  VFD +
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTF--------CNIWES------------------ 442
             +++ ++N ++SGY  +C + D+ + F           W S                  
Sbjct: 111 YLRDVVSYNSIISGYA-SCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVF 169

Query: 443 ------GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
                 GV  +  +   V++ C   E   M  Q+HG ++K GF       S+L+  Y   
Sbjct: 170 LEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC 229

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
            +LD+S    +     +  SW AM++  V    N E + +F  +   G    + I  ++ 
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            SCAA+ A +  K +H   +K  F +++ V +A +D YAKCG +  A+     S     +
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVL-SSMPKCSL 348

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFK 675
             YN +I+ YA      +A++ F  +    L   + T    ++AC S +G ++   +   
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGL 408

Query: 676 SMDSQYGMQPSPDCYG-CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           ++ S   +  S  C    ++DM  +   L +A  + ++M  + + + + ++++ C  +GN
Sbjct: 409 AVKS---ISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVS-WNAIIAACEQNGN 464

Query: 735 KE 736
           +E
Sbjct: 465 EE 466


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 216/704 (30%), Positives = 360/704 (51%), Gaps = 3/704 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS +   +VH  +V  G   D+FL N L+  Y K G       +FD+M  RNLVSW+ +V
Sbjct: 54  KSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVV 113

Query: 118 SAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           S   Q G  +  L  +++  +T     NE+ + S+++ CV     E G  +H + +K   
Sbjct: 114 SMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGF 173

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            ++ +VG S++  YAK G++  A  VF  +       W A+I GY   G    +L + + 
Sbjct: 174 GEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNL 233

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+   +  DKY   + L  CS++     G+QIH  ++RSE +  +S  N LID Y K   
Sbjct: 234 MMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGR 293

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +     +F+R+  K++ISW T+  G+ +N    +   L  +    G +P+    S +L  
Sbjct: 294 VKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTS 353

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           CG +  L  G Q+    +      +  VT++LI M+ +C A++ A  VFD V+  ++  +
Sbjct: 354 CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++ GY         L+ F  +    V  +  TF  ++         Q+  QIHG IIK
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            GFS   +  S+LI  Y     + ++     G    D+  W ++ S    Q  + EA  +
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKL 533

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           +  L  + E+P+E+    +  + + + +    +  H  V+K+G  ++ ++ +A++D YAK
Sbjct: 534 YSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAK 593

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG ++ A   F  S    D   +N++I  YA HG V EA+ +F+ M   N+ P+  TFVS
Sbjct: 594 CGSVEEAEKIFSSSV-WKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVS 652

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SACSH G V+ G   + SM ++YG++P  + Y  +V +L R G L +A+  IE M  +
Sbjct: 653 VLSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIR 711

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P+  V+RSLLS CR+ GN EL + A+E  + + P +  ++V+LS
Sbjct: 712 PAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLS 755



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 139/593 (23%), Positives = 281/593 (47%), Gaps = 8/593 (1%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           A+ +++   VS  +  +   +HC  +   ++ + F+   +L+ Y K+G V  A  +F  +
Sbjct: 42  ALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKM 101

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK---YTFINALQGCSLVADFD 263
            + ++  W++++  Y   GY  +AL  +  + F+   +DK   Y   + ++ C      +
Sbjct: 102 PNRNLVSWSSVVSMYTQLGYNEKAL--LYFLEFQRTCVDKLNEYILASIIRACVQRDGGE 159

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G Q+H  +I+S     + +  +L+ +Y K   +D A  VF+ +  K  ++W  +  G++
Sbjct: 160 PGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYT 219

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           ++     +  LF+  + S   P+    S +L  C  L  L  G Q+    L      + +
Sbjct: 220 KSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVS 279

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             + LI  + +CG V+   ++FD +  KNI +W  +++GY  N  D + ++    ++  G
Sbjct: 280 TYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMG 339

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            + +      V+ +C   +  Q   QIH  +IK       ++ ++LI  Y     LD++ 
Sbjct: 340 WKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAK 399

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              +      +  + AM+     QG+   A+ +F  +      P      ++L   AA+ 
Sbjct: 400 RVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALL 459

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             Q +K IH  +IK GF+ + + +SA+ID Y+KC  I+ AR  F+ + N  D++V+N+L 
Sbjct: 460 CLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTN-KDIVVWNSLF 518

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y       EA +++  ++L+  +P++ TF ++ +A S    +  G   F +   + G+
Sbjct: 519 SGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHG-QQFHNQVMKMGL 577

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           +  P     LVDM ++ G +E+A+ +     ++ +   + S++S    HG  E
Sbjct: 578 ESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDT-ACWNSMISMYAQHGKVE 629


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 211/737 (28%), Positives = 381/737 (51%), Gaps = 12/737 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS  E+  SR+ G  +H  ++K G   ++ L NNL+++Y K        ++FDEM +R +
Sbjct: 30  LSFCESSSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMPQRTV 88

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +WT+++SA  ++ EF   L ++ +M  +G  PNEF   SV++ C  +G   +G  +H  
Sbjct: 89  FAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRSCAGLGDLSYGGRVHGS 148

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            LK   E N  VG S+ + Y+K G +  A  +F S+ + D   W  MI          EA
Sbjct: 149 VLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISWTMMISSLVGARKWSEA 208

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L   S M+  G+  +++TF+  L G S     + G+ IH  II   +  ++ +  +L+  
Sbjct: 209 LRFYSEMIKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSSIIVRGIPLNVVLKTSLVYF 267

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y   S M+ A +V     ++DV  W ++  GF  N    +    F +    G  PN+ T+
Sbjct: 268 YSHFSIMEDAVRVLNSTGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLHPNNFTY 327

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM-AHSVFDNVS 409
           S +L  C  +  LDLG Q+    +  GF D  +V ++L+ M+ +C A E+ A  VF  + 
Sbjct: 328 SAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMKCSASEVEASRVFGAMI 387

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             N+ +W  L+ G   +  + D       + +  VE N  T   V+  C + +  ++V +
Sbjct: 388 SPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLE 447

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IHG +++        + +SL+ +Y + G++D ++  +   +  D  ++ ++++     G 
Sbjct: 448 IHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRDNITYTSLVTRFNELGK 507

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           +  A+++ + +   G + D+  L   +++ A +GA++  K +H + +K GF+  V V ++
Sbjct: 508 HEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNS 567

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KCG ++ A+  F++     DV+ +N L+   A  G +S A+  F++M++   +P
Sbjct: 568 LVDMYSKCGSLEDAKKVFEE-IAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEP 626

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TF+ ++SACS   L + G   F+SM + + M+P  + Y  LV +L R G LE+A  V
Sbjct: 627 DSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEPQIEHYVHLVGILGRAGRLEEATGV 686

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS--------K 761
           +E M  +P+  ++++LL  CR HGN  LGE  + K L L P + A ++LL+         
Sbjct: 687 VETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPAFYILLADLYDESGKP 746

Query: 762 RKRQREGNLLDHEGVCN 778
              Q+  NL+  +G+C 
Sbjct: 747 ELAQKTRNLMSEKGLCK 763



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 207/457 (45%), Gaps = 29/457 (6%)

Query: 343 SRPNHVTFSILLRQCGKLLDL------DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           SR N +  S L + C ++L         +GL + C  +  G L+  ++ ++L+ ++ +  
Sbjct: 14  SRTNEL--SNLQQSCIRILSFCESSSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD 71

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            +  A  +FD +  + +  W  ++S +  +   A  L  F  +  SG+  N  TF  V+ 
Sbjct: 72  GIWNARKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIR 131

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +C    +    G++HG+++KTGF     + SSL   Y   G+L  + E  +  +  D  S
Sbjct: 132 SCAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTIS 191

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  M+S+LV      EA+  +  +++AG  P+E+    +L + + +G  +  K+IH  +I
Sbjct: 192 WTMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSSII 250

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G    V + ++++  Y+    ++ A    + S    DV ++ +++  +  +    EA+
Sbjct: 251 VRGIPLNVVLKTSLVYFYSHFSIMEDAVRVLN-STGEQDVFLWTSVVSGFVRNLRAKEAV 309

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
             F +M+   L P+  T+ +++S CS    +D G  +  S   + G + S D    LV M
Sbjct: 310 GTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQI-HSQTIKVGFEDSTDVGNALVSM 368

Query: 697 LSRNGYLE-DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
             +    E +A  V   M   P+   + +L+ G   HG ++                D  
Sbjct: 369 YMKCSASEVEASRVFGAM-ISPNVVSWTTLILGLVDHGFEQ----------------DCF 411

Query: 756 HVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
            +L+   KR+ E N +   GV      +K + L LE+
Sbjct: 412 GLLMEMVKREVEPNFVTLSGVLRACSKLKYLRLVLEI 448



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 106/217 (48%), Gaps = 2/217 (0%)

Query: 43  DPIFLAKS--LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           +P F+  S  L     LK   L  ++HG++++     ++ + N+L+  Y+  G   +   
Sbjct: 423 EPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWN 482

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           V   M  R+ +++T +V+   + G+ +M L +   M  +G   ++ ++   +    ++GA
Sbjct: 483 VTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGA 542

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +HC+++K        V  S+++ Y+K G +  A++VF  I+  DV  WN ++ G
Sbjct: 543 HETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSG 602

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  G    AL+    M  +G   D  TF+  L  CS
Sbjct: 603 LASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACS 639



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 62/125 (49%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + L   +S S NL +   G  +H + VK GF+  + + N+L+ MYSKCG      
Sbjct: 523 IRMDQLSLPGFISASANLGAHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAK 582

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+E+A  ++VSW  +VS     G     L  + +M+  G  P+      ++  C    
Sbjct: 583 KVFEEIAMPDVVSWNGLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGR 642

Query: 160 ASEFG 164
            +E G
Sbjct: 643 LTEMG 647


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 217/698 (31%), Positives = 361/698 (51%), Gaps = 4/698 (0%)

Query: 65  QVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           ++H  IV  GF  +DIFL N L+  YSK        ++FD M+ +NLV+W+ +VS    +
Sbjct: 59  KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHH 118

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                 L ++V  M++    PNE+ + SV++ C   G       IH   +K    ++ +V
Sbjct: 119 SHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYV 178

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++FY K   +  A  +F  +       W  +I GY+  G    +L +   M    +
Sbjct: 179 CTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHV 238

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DKY   + L  C ++   + G+QIH  ++RS +   +S+VN  ID Y K   +    K
Sbjct: 239 CPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRK 298

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+RM DK+V+SW T+  G  +N        LF +    G  P+    + +L  CG L+ 
Sbjct: 299 LFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVA 358

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+   A+     +++ V + LI M+ +C ++  A  VF+ ++  ++ ++N ++ G
Sbjct: 359 LEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEG 418

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       + L  F  +  S        F  ++       + ++  QIHG IIK G S  
Sbjct: 419 YSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLD 478

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +  S+LI  Y    ++ ++       +  D+  W AM S    Q  N E++ ++  L  
Sbjct: 479 EFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQM 538

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +  KP+E+    ++ + + I + +  +  H  VIK+GF+ + +VA+ ++D YAK G I+ 
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A  AF  S N  D   +N++I  YA HG   +A+++F+ M +  L+P+  TFV V+SACS
Sbjct: 599 AHKAF-ISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACS 657

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+D G   F SM SQ+G++P  + Y C+V +L R G L +AK  IE MP + +  V+
Sbjct: 658 HTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVW 716

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RSLLS CR+ GN ELG +A+E  +   P +  ++VLLS
Sbjct: 717 RSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLS 754



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 216/419 (51%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+  LS    LK    G Q+H ++++ G   D+ + N  I  Y KC     G ++F
Sbjct: 241 DKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLF 300

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M ++N+VSWT +++  +QN      L ++V+M   G+ P+ F   SV+  C S+ A E
Sbjct: 301 DRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALE 360

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H +A+K+ I+ + FV   +++ YAK   +  A +VF  +++ D+  +NAMI GY+
Sbjct: 361 KGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYS 420

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EAL++   M     +     F++ L   + +   ++  QIHGLII+  V     
Sbjct: 421 RQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEF 480

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             +ALID+Y K S +  A  VFE + DKD++ W  +F G+++     ++  L+    +S 
Sbjct: 481 AGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSR 540

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            +PN  TF+ ++     +  L  G Q     +  GF D+  V ++L+ M+ + G++E AH
Sbjct: 541 LKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAH 600

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             F + ++K+   WN +++ Y  +      L+ F ++   G++ N  TF  V+  C  +
Sbjct: 601 KAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 13/367 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH + +K+   ND F++N LI MY+KC       +VF+ MA  +LVS+  ++    +
Sbjct: 362 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSR 421

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
             +    L ++ +M+ +   P      S++ V  S+   E    IH   +K  +  + F 
Sbjct: 422 QDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFA 481

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y+K   V  A  VF  I   D+  W AM  GY       E+L +   +    +
Sbjct: 482 GSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRL 541

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +++TF   +   S +A    G+Q H  +I+   +    + N L+DMY KS  ++ A K
Sbjct: 542 KPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHK 601

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            F     KD   WN++   ++++    +   +F   I+ G +PN+VTF  +L  C     
Sbjct: 602 AFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGL 661

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFDNVSYKN-ITT 415
           LDLG        H   + +  +   + +  C      R G +  A    + +  K     
Sbjct: 662 LDLGFD------HFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVV 715

Query: 416 WNELLSG 422
           W  LLS 
Sbjct: 716 WRSLLSA 722



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 134/272 (49%), Gaps = 1/272 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +S +L    L  Q+HG I+K G + D F  + LI +YSKC   G    VF+E+ ++++
Sbjct: 451 LGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDI 510

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V WT + S   Q  E +  LK+Y  ++ +   PNEF   +V+    ++ +   G   H  
Sbjct: 511 VVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQ 570

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K+  + +PFV  ++++ YAK G +  A + F S +  D  CWN+MI  YA  G   +A
Sbjct: 571 VIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKA 630

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L V   M+ EG+  +  TF+  L  CS     D+G      + +  +E  I     ++ +
Sbjct: 631 LQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSL 690

Query: 291 YIKSSGMDYAFKVFERMADKD-VISWNTLFGG 321
             ++  +  A +  E+M  K   + W +L   
Sbjct: 691 LGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+ +    A  ++ + N+ S   G Q H  ++K+GF +D F+ N L+ MY+K G    
Sbjct: 539 SRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEE 598

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F     ++   W  +++   Q+GE +  L+++ DM   G  PN      V+  C  
Sbjct: 599 AHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSH 658

Query: 158 MGASEFGY 165
            G  + G+
Sbjct: 659 TGLLDLGF 666


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 216/719 (30%), Positives = 365/719 (50%), Gaps = 37/719 (5%)

Query: 63  GTQVHGHIVKLGFTNDI---FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           G Q+H H V  G   D    FL   L+ MY KCG      R+FD M  R + SW  ++ A
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133

Query: 120 AIQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            + +G     + +Y  M+ +    G  P+   + SV+K C + G    G  +H  A+K  
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           ++++  V  +++  YAK G + +A RVF +     DV  WN+ I G    G   EAL++ 
Sbjct: 194 LDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLF 253

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  +G +M+ YT +  LQ C+ +A  + GR++H  +++   E +I   NAL+ MY + 
Sbjct: 254 RRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQ-CNALLVMYARC 312

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A +VF  + DKD ISWN++   + +N+   +    F + + +G  P+H     LL
Sbjct: 313 GWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLL 372

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              G L  L  G ++   A+      +  + ++L+ M+ +C +VE +  VFD +  K+  
Sbjct: 373 SAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHV 432

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  +++ Y  +   ++ +  F    + G++V+      ++E C   ++  ++ Q+H   
Sbjct: 433 SWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYA 492

Query: 475 IKTG-------------FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           I+ G             +  CG +C +L           N FE     ++ D+ +W +M+
Sbjct: 493 IRNGLLDLILKNRIIDIYGECGEVCYAL-----------NIFEM---LDKKDIVTWTSMV 538

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +     G  HEAV +F  ++ AG +PD   L  IL + A + +  + K IH F+I+  F 
Sbjct: 539 NCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFP 598

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            E  V S+++D Y+ CG +  A   FD++    DV+++  +I A   HG   +A+ IF +
Sbjct: 599 VEGAVVSSLVDMYSGCGSMNYALKVFDEA-KCKDVVLWTAMINATGMHGHGKQAIYIFKR 657

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M    + P   +F++++ ACSH  LVD+G      M S+Y +QP  + Y C+VD+L R+G
Sbjct: 658 MLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSG 717

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             E+A   I+ MP +P   V+ +LL  CRIH N EL   A++KLL L P N   +VL+S
Sbjct: 718 QTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVS 776



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 154/314 (49%), Gaps = 3/314 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   +L   + G +VH + VK    +D+ + N L+ MY KC       RVFD M  ++ 
Sbjct: 372 LSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDH 431

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSWT I++   Q+  +   +  +   +  G   +   +GS+++ C  + +      +H +
Sbjct: 432 VSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSY 491

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           A++  +  +  +   +++ Y + G+V  A  +F  +   D+  W +M+  +A  G   EA
Sbjct: 492 AIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEA 550

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +   ML  GI  D    +  L   + ++    G++IHG +IR +     ++V++L+DM
Sbjct: 551 VALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDM 610

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y     M+YA KVF+    KDV+ W  +      + +  Q   +F + + +G  P+HV+F
Sbjct: 611 YSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSF 670

Query: 351 SILLRQC--GKLLD 362
             LL  C   KL+D
Sbjct: 671 LALLYACSHSKLVD 684



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 143/311 (45%), Gaps = 3/311 (0%)

Query: 19  HATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           +A   R     G  +      ++ DP+ +   L     LKS  L  QVH + ++ G   D
Sbjct: 441 YAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-D 499

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           + L+N +I +Y +CG   + L +F+ + ++++V+WT +V+   +NG     + ++  M  
Sbjct: 500 LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLN 559

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  P+  A+  ++     + +   G  IH F ++ +      V  S+++ Y+  G +  
Sbjct: 560 AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 619

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A +VF      DV  W AMI      G+G +A+ +   ML  G++ D  +F+  L  CS 
Sbjct: 620 ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679

Query: 259 VADFDIGR-QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWN 316
               D G+  +  ++ + +++        ++D+  +S   + A+K  + M  +   + W 
Sbjct: 680 SKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWC 739

Query: 317 TLFGGFSENKN 327
            L G    +KN
Sbjct: 740 ALLGACRIHKN 750


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 208/713 (29%), Positives = 369/713 (51%), Gaps = 28/713 (3%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           +K LS     KS   G Q+H HI K G ++D  ++N+LI +YSKC  FG+  ++ DE +E
Sbjct: 60  SKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSE 119

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            +LVSW+ ++S   QNG     L  + +M   G   NEF   SV+K C  +     G  +
Sbjct: 120 PDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   +    E + FV  +++  YAK  +   ++R+F  I   +V  WNA+   Y    + 
Sbjct: 180 HGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFC 239

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            EA+ +   M+  GI  ++++  + +  C+ + D   G+ IHG +I+   +      NAL
Sbjct: 240 GEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANAL 299

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   +  A  VFE++   D++SWN +  G   +++  Q   L  +      R  H
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM----KRQLH 355

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +          L+ +D+   L              V+  L+ M+ +C  +E A   F+ 
Sbjct: 356 SS----------LMKMDMESDL-------------FVSVGLVDMYSKCDLLEDARMAFNL 392

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  K++  WN ++SGY     D + L  F  + + G+  N  T   ++++    +   + 
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            Q+HG  +K+GF S  Y+ +SLI SY     ++++          D+ S+ +M++A    
Sbjct: 453 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 512

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   EA+ +F  + +   KPD ++  ++LN+CA + A+++ K +H  ++K GF  +++  
Sbjct: 513 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 572

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +++++ YAKCG I  A  AF +      ++ ++ +I   A HG   +A+++F++M    +
Sbjct: 573 NSLVNMYAKCGSIDDAGRAFSE-LTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGV 631

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P+  T VSV+ AC+H GLV +  L F+SM+  +G +P  + Y C++D+L R G + +A 
Sbjct: 632 SPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAV 691

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++  MPF+ + +V+ +LL   RIH + ELG  A+E L +L P+    HVLL+
Sbjct: 692 ELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLA 744



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 277/566 (48%), Gaps = 29/566 (5%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           F P   +   ++  C +  +   G  IH    K  +  +P +   ++N Y+K      A 
Sbjct: 52  FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           ++    S  D+  W+A+I GYA  G G  AL     M   G+  +++TF + L+ CS+V 
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D  IG+Q+HG+++ S  E  + + N L+ MY K      + ++F+ + +++V+SWN LF 
Sbjct: 172 DLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS 231

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            + +    G+   LF++ +LSG +PN  + S ++  C  L D   G  +    +  G+  
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +    ++L+ M+ + G +  A SVF+ +   +I +WN +++G   +              
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLH-----------EHH 340

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           E  +E+ G                QM  Q+H +++K    S  ++   L+  Y     L+
Sbjct: 341 EQALELLG----------------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 384

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++    N     D+ +W A++S       + EA+++F  + + G   ++  L TIL S A
Sbjct: 385 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +      + +H   +K GF++++YV +++ID+Y KC  ++ A   F++     D++ + 
Sbjct: 445 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEEC-TIGDLVSFT 503

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           ++I AYA +G   EA+++F +M+   L+P +    S+++AC++    ++G  L   +  +
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI-LK 562

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDA 706
           YG          LV+M ++ G ++DA
Sbjct: 563 YGFVLDIFAGNSLVNMYAKCGSIDDA 588



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 215/469 (45%), Gaps = 29/469 (6%)

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           T    ++   L  C        G QIH  I +S +    SI N LI++Y K     YA K
Sbjct: 53  TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           + +  ++ D++SW+ L  G+++N   G     FH+  L G + N  TFS +L+ C  + D
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G Q+  + +  GF  +  V ++L+ M+ +C     +  +FD +  +N+ +WN L S 
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       + +  F  +  SG++ N  +   +V  C    +      IHG +IK G+   
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWD 292

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +  ++L+  Y   G L ++       ++ D+ SW A+++  V   H+ +A+        
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE------- 345

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
                   +LG            Q  + +H  ++K+   ++++V+  ++D Y+KC  ++ 
Sbjct: 346 --------LLG------------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 385

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           ARMAF+      D+I +N +I  Y+ +    EA+ +F +M    +  +Q T  +++ + +
Sbjct: 386 ARMAFNL-LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 444

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
              +V   C     +  + G          L+D   +  ++EDA+ + E
Sbjct: 445 GLQVVHV-CRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 492



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 196/421 (46%), Gaps = 27/421 (6%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ +   L+  ++    L+    G  +HG+++KLG+  D F  N L+ MY+K G    
Sbjct: 252 SGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLAD 311

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            + VF+++ + ++VSW  +++  + +   +  L++   MK                    
Sbjct: 312 AISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ------------------ 353

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                    +H   +K+ +E + FV   +++ Y+K   +  A   F  +   D+  WNA+
Sbjct: 354 ---------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAI 404

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY+      EAL++   M  EGI  ++ T    L+  + +    + RQ+HGL ++S  
Sbjct: 405 ISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGF 464

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              I +VN+LID Y K S ++ A ++FE     D++S+ ++   +++     +   LF +
Sbjct: 465 HSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLE 524

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                 +P+    S LL  C  L   + G QL    L  GF+ +    +SL+ M+ +CG+
Sbjct: 525 MQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGS 584

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A   F  ++ + I +W+ ++ G   +      L+ F  + + GV  N  T   V+  
Sbjct: 585 IDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGA 644

Query: 458 C 458
           C
Sbjct: 645 C 645



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 189/393 (48%), Gaps = 21/393 (5%)

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           FSE+    QT ++ +        P  V++S LL QC     L  GLQ+       G  D+
Sbjct: 34  FSEDP---QTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDD 90

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            ++ + LI ++ +C     A  + D  S  ++ +W+ L+SGY  N      L  F  +  
Sbjct: 91  PSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHL 150

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ-LD 500
            GV+ N  TF  V++ C   ++ ++  Q+HG ++ +GF    ++ ++L+  Y    + LD
Sbjct: 151 LGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLD 210

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           +   F    ER ++ SW A+ S  V      EAV +F+ +V +G KP+E+ L +++N+C 
Sbjct: 211 SKRLFDEIPER-NVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +    R K IH ++IKLG++ + + A+A++D YAK GD+  A   F++     D++ +N
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEK-IKQPDIVSWN 328

Query: 621 TLIMAYAHHGLVSEAMEIFDKMK------LANLQPSQATFVSVMSACSHKGLVD--KGCL 672
            +I     H    +A+E+  +MK      L  +      FVSV       GLVD    C 
Sbjct: 329 AVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSV-------GLVDMYSKCD 381

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
           L +     + + P  D       +   + Y ED
Sbjct: 382 LLEDARMAFNLLPEKDLIAWNAIISGYSQYWED 414



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 63/123 (51%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L+ D    +  L+   NL +   G Q+H HI+K GF  DIF  N+L+ MY+KCG   
Sbjct: 527 DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 586

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R F E+ ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C 
Sbjct: 587 DAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACN 646

Query: 157 SMG 159
             G
Sbjct: 647 HAG 649


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 209/699 (29%), Positives = 354/699 (50%), Gaps = 4/699 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  +++     D FL ++L+ MY KCG      RVFD M  R++V+WT ++SA   
Sbjct: 69  GQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTA 128

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+ D  L M+  M   G  PN F + SV+K C     S+F + +H   +K+    +P+V
Sbjct: 129 AGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYV 188

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++  Y   G++ AAE V   +       WNA++ GYA  G     + ++  ++  G 
Sbjct: 189 GSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGD 248

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            + KYT    L+ C  +     G+ +H  +I+  +E    + + L++MY +    + A++
Sbjct: 249 EISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYE 308

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF R+ + DV+  + +   F  +    +   LF K    G +PNH  F  +     +  D
Sbjct: 309 VFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGD 368

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            +L   +    +  GF   + V  +++ M+ + GAV+ A   FD +   +  +WN +LS 
Sbjct: 369 ANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSA 428

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +         L+ F  +   G   N  T+  V+  C    N +   Q+H  I+K+G  + 
Sbjct: 429 FYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQND 488

Query: 483 GYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +   L+  Y   G   ++   F    ER D  SW  +MS         + V  F S++
Sbjct: 489 TDVSRMLVDMYAQSGCFTSACLVFEQLKER-DAFSWTVIMSGYAKTEEAEKVVEYFRSML 547

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               +P +  L   L+ C+ + +      +H + IK G+N+ V V+ A++D Y KCG+I 
Sbjct: 548 RENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIA 606

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A M F +S  + D + +NT+I  Y+ HG   +A++ F +M     +P   TFV V+SAC
Sbjct: 607 DAEMLFHES-ETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSAC 665

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GL+++G   FKS+ S YG+ P+ + Y C+VD+LS+ G L +A+ +I  MP  P  ++
Sbjct: 666 SHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSI 725

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +R++L  CRIH N E+ E A+E+L  L P + ++ +LLS
Sbjct: 726 WRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLS 764



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/466 (24%), Positives = 211/466 (45%), Gaps = 14/466 (3%)

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           ALQ C++      G+++H  ++RS +     ++++L++MY K   +  A +VF+ M  +D
Sbjct: 56  ALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRD 115

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           +++W  +    +   +  Q   +F +    G  PN  T + +L+ C          Q+  
Sbjct: 116 IVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHG 175

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +    LD+  V SSL+  +  CG ++ A +V   +  ++  +WN LL+GY  +     
Sbjct: 176 QVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRR 235

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLI 490
           V+     +  SG E++  T   V++ CC        GQ +H ++IK G  +   + S L+
Sbjct: 236 VMIIIEKLVASGDEISKYTLPTVLK-CCMELGLAKYGQSVHASVIKRGLETDNVLNSCLV 294

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
           + Y      + ++E     +  D+    AM+S         EA+ +F  +   G KP+ Y
Sbjct: 295 EMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHY 354

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           I   I    +  G     +S+H +++K GF     V  A+++ Y K G ++ A + FD  
Sbjct: 355 IFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDL- 413

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----HKG 665
            +  D   +NT++ A+       + + IF +M       ++ T+VSV+  C+       G
Sbjct: 414 IHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFG 473

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
                C+L      + G+Q   D    LVDM +++G    A  V E
Sbjct: 474 TQVHACIL------KSGLQNDTDVSRMLVDMYAQSGCFTSACLVFE 513



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 175/385 (45%), Gaps = 3/385 (0%)

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L+ C     L  G +L    L      +  +  SL+ M+C+CG +  A  VFD + +++I
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             W  ++S +         L  F  + + G+  NG T   V++ C    + +   Q+HG 
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K       Y+ SSL+++Y + G+LD +     G       SW A+++     G     
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + I   LV +G++  +Y L T+L  C  +G  +  +S+H  VIK G  T+  + S +++ 
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y++C   + A   F +  +  DV+  + +I  +  H +  EA+++F KM    ++P+   
Sbjct: 297 YSRCLSAEEAYEVFIR-IDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV +    S  G  +  C    +   + G          +++M  + G ++DA    +++
Sbjct: 356 FVGIAGVASRTGDANL-CRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLI 414

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELG 738
             +P    + ++LS      N E G
Sbjct: 415 -HEPDTFSWNTILSAFYSGSNCEQG 438



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 32/275 (11%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R     LA SLS+  ++ S   G Q+H   +K G+ + + +   L+ MY KCG      
Sbjct: 551 IRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAE 609

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---- 155
            +F E   R+ V+W  I+    Q+G     L  +  M   G  P+      V+  C    
Sbjct: 610 MLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAG 669

Query: 156 -VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
            ++ G   F      + +   +E      C V +  +K G +  AE +   +  + D   
Sbjct: 670 LLNEGRKYFKSLSSIYGITPTMEH---YACMV-DILSKAGRLVEAESLINQMPLAPDSSI 725

Query: 214 WNAMIGG------------YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           W  ++G              A   +  E  +  SS+L   I  D   + +  +  +++ D
Sbjct: 726 WRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVTRVRNILLD 785

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
                  HG  ++ E  CS   +N  I M++   G
Sbjct: 786 -------HG--VKKEPGCSWIEINGQIHMFLSQDG 811


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 201/696 (28%), Positives = 358/696 (51%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   V  G   D  + N LI +Y+K G      +VF E++ R+ VSW  ++S   Q+G
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                 ++Y  M     +P  + + SV+  C        G  IH    K       FVG 
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y   G    AERVF  +   D   +N +I G+A CG+G  AL +   M   G+  
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V D   G+Q+H  ++++ +        +L+D+Y+K   ++ A  +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   + +  +  ++  +F +   +G  PN  T+  +LR C     ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIE 363

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ + G ++ A  + + +  +++ +W  +++GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L TF  + + GV  +          C   +  +   QIH  +  +G+++   
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G+ + +F      E  D  +W  ++S         +A+ +F  + +AG
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAG 543

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + +++ A +   ++ K +H   +K G  +E  VA+A+I  Y KCG I+ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA+++FD+MK   L+P+  TF+ V++ACSH 
Sbjct: 604 MIFSEMSLRNEV-SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   FKSM + YG+ P PD Y C+VD+L R G L+ A+  ++ MP   +  ++R+
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE A++ LL L P + A++VLLS
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLS 758



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 154/624 (24%), Positives = 295/624 (47%), Gaps = 4/624 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     K    G  +H  + K  F ++ F+ N LIA+Y   G F    RVF 
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M   + V++  ++S   Q G  +  L+++ +M+ +G  P+   V S++  C S+G  + 
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + LK  +  +     S+L+ Y K GD+  A  +F      +V  WN M+  Y  
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +++T+   L+ C+     ++G QIH L I++  E  + +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   +D A K+ E +  +DV+SW ++  G+ ++    +  + F +    G 
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +     C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG  E A S
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFS 503

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F  + +K+  TWN L+SG+  +      L  F  + ++G + N  TF   +       +
Sbjct: 504 LFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLAD 563

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   Q+HG  +KTG +S   + ++LI  Y   G ++++    +     +  SW  ++++
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G   EA+ +F  + + G KP++     +L +C+ +G  +   S    +  + G N 
Sbjct: 624 CSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNP 683

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                + V+D   + G +  AR   D+   + + +++ TL+ A   H  + E  E+  K 
Sbjct: 684 IPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNI-EIGELAAK- 741

Query: 643 KLANLQP-SQATFVSVMSACSHKG 665
            L  L+P   A++V + +A +  G
Sbjct: 742 HLLELEPHDSASYVLLSNAYAVTG 765



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/421 (26%), Positives = 200/421 (47%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR D + +A  L+   ++     G Q+H +++K G + D   + +L+ +Y KCG    
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +F+     N+V W L++ A  Q  +     +++  M+  G  PN+F    +++ C  
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTC 358

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            G  E G  IH  ++K   E + +V   +++ Y+K G +  A ++   +   DV  W +M
Sbjct: 359 TGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSM 418

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY    +  EAL     M   G+  D     +A   C+ +     G QIH  +  S  
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              ISI N L+++Y +    + AF +F  +  KD I+WN L  GF +++   Q   +F K
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMK 538

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +G++ N  TF   +     L D+  G Q+   A+  G   E  V ++LI ++ +CG+
Sbjct: 539 MGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E A  +F  +S +N  +WN +++    +    + L  F  + + G++ N  TF  V+  
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658

Query: 458 C 458
           C
Sbjct: 659 C 659



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 179/356 (50%), Gaps = 16/356 (4%)

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           L L++   ++  G   +  + + LI ++ + G V  A  VF  +S ++  +W  +LSGY 
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    +  + +  +  + V         V+  C + +       IH  + K  F S  +
Sbjct: 121 QSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERL-------DMASWGAMMSALVHQGHNHEAVTIF 537
           + ++LI  Y+ FG    SF+    AER+       D  ++  ++S     GH   A+ IF
Sbjct: 181 VGNALIALYLGFG----SFKL---AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +  +G +PD   + ++L +CA++G  Q+ K +H +++K G + +     +++D Y KC
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           GDI+ A   F+    +N V+++N +++AY     ++++ EIF +M+   + P+Q T+  +
Sbjct: 294 GDIETAHDIFNLGDRTN-VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCI 352

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +  C+  G ++ G  +  S+  + G +      G L+DM S+ G L+ A+ ++E++
Sbjct: 353 LRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEML 407



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 16/294 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA + S    +K+   G Q+H  +   G+  DI + N L+ +Y++CG       +F
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            E+  ++ ++W  ++S   Q+  +   L +++ M   G   N F   S +    ++   +
Sbjct: 506 REIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIK 565

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H  A+K        V  ++++ Y K G +  A+ +F  +S  +   WN +I   +
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCS 625

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGL-IIR 274
             G G EAL++   M  EG+  +  TFI  L  CS V   + G         ++GL  I 
Sbjct: 626 QHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIP 685

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
               C       ++D+  ++  +D A +  + M    + + W TL      +KN
Sbjct: 686 DHYAC-------VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKN 732



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 117/254 (46%), Gaps = 4/254 (1%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R     +V +IH   +  G  +   I + LI  Y   G +  + +        D  SW A
Sbjct: 55  RGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVA 114

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+S     G   EA  ++  +      P  Y+L ++L++C     + + + IH  V K  
Sbjct: 115 MLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAF-DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           F +E +V +A+I  Y   G  K A   F D  F   D + +NTLI  +A  G    A++I
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLF--CDRVTFNTLISGHAQCGHGECALQI 232

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           FD+M+L+ L+P   T  S+++AC+  G + KG  L   +  + GM       G L+D+  
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL-LKAGMSFDYITEGSLLDLYV 291

Query: 699 RNGYLEDAKHVIEI 712
           + G +E A  +  +
Sbjct: 292 KCGDIETAHDIFNL 305


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 220/723 (30%), Positives = 342/723 (47%), Gaps = 76/723 (10%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDE-------------------------------MA 106
           D FL N L+ +YS+ G     L  F                                 M 
Sbjct: 42  DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101

Query: 107 ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            RN VSW  ++SA A   G+    ++MY  M+  G +P  F + SV+  C  + A   G 
Sbjct: 102 RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGR 161

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
             H  A+K+ ++ N FV  ++L  Y K G V  A R+FY ++  +   + AM+GG A  G
Sbjct: 162 RCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTG 221

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGC--------SLVADFDIGRQIHGLIIRSEV 277
              +AL + + M   G+ +D  +  + L  C        S+   F +G+ IH L++R   
Sbjct: 222 SIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGF 281

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                + N+LIDMY K   MD A KVFE +    ++SWN L  GF +  +  +   +   
Sbjct: 282 GSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSL 341

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +G  PN VT+S LL  C K  D                                   
Sbjct: 342 MQEAGFEPNEVTYSNLLASCIKARD----------------------------------- 366

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           V  A ++FD +S  ++TTWN LLSGYC      D ++ F  +    V+ +  T   ++ +
Sbjct: 367 VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSS 426

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C +        Q+H A ++    +  ++ S L+  Y   GQ+  +    N     D+  W
Sbjct: 427 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 486

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            +++S L     N EA   F  + E G  P E    +++NSC+ + +    + IH  V+K
Sbjct: 487 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 546

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G++  VYV SA+ID YAKCG++  AR+ FD     N ++ +N +I  YA +GL  +A+E
Sbjct: 547 DGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKN-IVAWNEMIHGYAQNGLGDKAVE 605

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F+ M     +P   TF++V++ CSH GLVDK    F SM++ YG+ P  + Y CL+D L
Sbjct: 606 LFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDAL 665

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            R G   + + +I  MP +  P ++  LL+ C +H N ELG+ A+E L  + PKN + +V
Sbjct: 666 GRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYV 725

Query: 758 LLS 760
           LLS
Sbjct: 726 LLS 728



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/593 (24%), Positives = 265/593 (44%), Gaps = 45/593 (7%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  LS    L +   G + HG  VK+G   + F++N L+ MY+KCG  G  +R+F  MA
Sbjct: 144 LASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMA 203

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF--- 163
             N VS+T ++    Q G  D  L+++  M  +G   +  +V SV+  C    A+++   
Sbjct: 204 RPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVA 263

Query: 164 -----GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G +IH   ++     +  VG S+++ Y K  ++  A +VF S+ S  +  WN +I
Sbjct: 264 RAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILI 323

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G+   G   +A+ V+S M   G   ++ T+ N L  C                      
Sbjct: 324 TGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASC---------------------- 361

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
                        IK+  +  A  +F++++   V +WNTL  G+ + +    T  LF + 
Sbjct: 362 -------------IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRM 408

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
                +P+  T +++L  C KL  LD G Q+   ++     ++  V S L+ M+ +CG +
Sbjct: 409 QHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQI 468

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +A S+F+ ++ +++  WN ++SG   +  + +    F  + E+G+     ++  ++ +C
Sbjct: 469 GIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSC 528

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
            R  +     QIH  ++K G+    Y+ S+LI  Y   G +D++  F +     ++ +W 
Sbjct: 529 SRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWN 588

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIK 577
            M+      G   +AV +F  ++   +KPD      +L  C+  G   +  +  +     
Sbjct: 589 EMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENS 648

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHH 629
            G        + +IDA  + G          +    +D I++  L+ A   HH
Sbjct: 649 YGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHH 701



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 109/218 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L     G QVH   V+    ND+F+ + L+ MYSKCG  G   
Sbjct: 413 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 472

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F++M ER++V W  I+S    +         +  M+ NG MP E +  S++  C  + 
Sbjct: 473 SIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLS 532

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  IH   +K   ++N +VG ++++ YAK G++  A   F ++   ++  WN MI 
Sbjct: 533 SIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIH 592

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GYA  G G +A+ +   ML      D  TFI  L GCS
Sbjct: 593 GYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 630


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 210/697 (30%), Positives = 365/697 (52%), Gaps = 31/697 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           + G+ VK+G   D+F+   L+ +Y+K         +FD M  R++V W +++ A ++ G 
Sbjct: 144 LQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGA 203

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            D  L ++     +G  P+          CVS+     G                 VG  
Sbjct: 204 GDEVLGLFSAFHRSGLRPD----------CVSVRTILMG-----------------VGKK 236

Query: 186 VLNFYAKLGDVAA-AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            + F  +L  V A A ++F      DV  WN  +  Y   G G+EA++    M+   +  
Sbjct: 237 TV-FERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPC 295

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T+I  L   + +   ++G+QIHG ++R   +  +S+ N+ I+MY+K+  ++YA ++F
Sbjct: 296 DSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMF 355

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD-L 363
            +M + D+ISWNT+  G + +     +  LF   + SG  P+  T + +LR C  L +  
Sbjct: 356 GQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESY 415

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            +G Q+   AL  G + +  V+++LI ++ + G +E A  +F N    ++ +WN ++ G+
Sbjct: 416 CVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    + L+ F  + E G + +  TF    +        Q   QIH  +IK  F    
Sbjct: 476 TVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL 535

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ S ++  Y+  G++ ++ +  N     D  +W  ++S  V  G   +A+  +H +  A
Sbjct: 536 FVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLA 595

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PDEY   T++ +C+ + A ++ K IH  ++KL    + +V ++++D YAKCG+I+ A
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDA 655

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F +  N+  V ++N +I+  A HG   EA+  F++MK   + P + TF+ V+SACSH
Sbjct: 656 YGLF-RRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSH 714

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GL       F SM   YG++P  + Y CLVD LSR G++++A+ V+  MPF+ S T+YR
Sbjct: 715 SGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYR 774

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ CR+ G+KE GE  +EKL  + P + AA+VLLS
Sbjct: 775 TLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLS 811



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 176/685 (25%), Positives = 319/685 (46%), Gaps = 39/685 (5%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIVS 118
           +LG + H  IV  G   D ++ NNLI MY+KCG      ++FD    ++R+LV++  I++
Sbjct: 30  ILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILA 89

Query: 119 AAIQNGEFD------MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           A    GE            ++  ++ +  +     +  + K+C+  G+     ++  +A+
Sbjct: 90  AYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV 149

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           KI ++ + FV  +++N YAK   +  A  +F  +   DV  WN M+  Y   G G E L 
Sbjct: 150 KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLG 209

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S+    G+  D  +    L G        +G+       ++  E  +  V A      
Sbjct: 210 LFSAFHRSGLRPDCVSVRTILMG--------VGK-------KTVFERELEQVRA------ 248

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
                 YA K+F    D DV  WN     + +     +    F   I S    + +T+ +
Sbjct: 249 ------YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L     L  L+LG Q+    +  G+    +V +S I M+ + G+V  A  +F  +   +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIH 471
           + +WN ++SG   +  +   L+ F ++  SG+  +  T   V+  C   E    VG Q+H
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVH 422

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
              +K G     ++ ++LI  Y   G+++ +    +  +  D+ASW AMM       +  
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYR 482

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           EA+ +F  + E GEK D+        +   +   Q+ K IH  VIK+ F+ +++V S ++
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG++K AR  F+Q   S D + + T+I     +G   +A+  + +M+LA +QP +
Sbjct: 543 DMYLKCGEMKSARKVFNQ-IPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDE 601

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF +++ ACS    +++G  +  ++  +      P     LVDM ++ G +EDA  +  
Sbjct: 602 YTFATLVKACSLLTALEQGKQIHANI-MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFR 660

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKE 736
            M  + S  ++ +++ G   HGN E
Sbjct: 661 RMNTR-SVALWNAMIVGLAQHGNAE 684



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 257/517 (49%), Gaps = 40/517 (7%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS+  +L    LG Q+HG +V+ G+   + + N+ I MY K G   +  R+F +M E +L
Sbjct: 304 LSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDL 363

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-FGYSIHC 169
           +SW  ++S   ++G  +  L++++D+  +G +P++F + SV++ C S+  S   G  +H 
Sbjct: 364 ISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHT 423

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
            ALK  I  + FV  ++++ Y+K G +  AE +F++    D+  WNAM+ G+       E
Sbjct: 424 CALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYRE 483

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL + S M   G   D+ TF NA +    +     G+QIH ++I+      + +++ ++D
Sbjct: 484 ALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILD 543

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY+K   M  A KVF ++   D ++W T+  G  EN    Q    +H+  L+G +P+  T
Sbjct: 544 MYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYT 603

Query: 350 FSILLRQCGKLLDLDLGLQLQC--LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           F+ L++ C  L  L+ G Q+    + L+C F  +  V +SL+ M+ +CG +E A+ +F  
Sbjct: 604 FATLVKACSLLTALEQGKQIHANIMKLNCAF--DPFVMTSLVDMYAKCGNIEDAYGLFRR 661

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++ +++  WN ++ G   +    + L  F  +   GV  +  TF  V+  C  S      
Sbjct: 662 MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHS------ 715

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
                     G +S          +Y NF  +  ++    G E  ++  +  ++ AL   
Sbjct: 716 ----------GLTS---------DAYKNFDSMQKTY----GVEP-EIEHYSCLVDALSRA 751

Query: 528 GHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIG 563
           GH  EA  +  S+  EA       +  T+LN+C   G
Sbjct: 752 GHIQEAEKVVSSMPFEASAT----MYRTLLNACRVQG 784



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 131/614 (21%), Positives = 267/614 (43%), Gaps = 56/614 (9%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           +  +P  F   S+++  ++      G   H   +   +  + +V  +++  YAK G + +
Sbjct: 10  SSLLPQWF---SILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFS 66

Query: 199 AERVF--YSISSDDVGCWNAMIGGYAHCG------YGFEALNVVSSMLFEGITMDKYTFI 250
           A ++F     S  D+  +NA++  YAH G         EA ++   +    +   ++T  
Sbjct: 67  ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
              + C L         + G  ++  ++  + +  AL+++Y K   +  A  +F+RM  +
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVR 186

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV+ WN +   + E     +   LF  F  SG RP+ V+   +L   GK    +  L   
Sbjct: 187 DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFEREL--- 243

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
                      E V +    +F           V D+ S  ++T WN+ LS Y       
Sbjct: 244 -----------EQVRAYATKLF-----------VCDDDS--DVTVWNKTLSSYLQAGEGW 279

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F ++ +S V  +  T+  ++       + ++  QIHGA+++ G+     + +S I
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             YV  G ++ +       + +D+ SW  ++S     G    ++ +F  L+ +G  PD++
Sbjct: 340 NMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQF 399

Query: 551 ILGTILNSCAAI-GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
            + ++L +C+++  +Y   + +H   +K G   + +V++A+ID Y+K G ++ A + F  
Sbjct: 400 TITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             +  D+  +N ++  +       EA+ +F  M     +  Q TF +   A         
Sbjct: 460 Q-DGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAA-------- 510

Query: 670 GCLLFKSMDSQ-----YGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           GCL+      Q       M+   D +    ++DM  + G ++ A+ V   +P  P    +
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAW 569

Query: 723 RSLLSGCRIHGNKE 736
            +++SGC  +G +E
Sbjct: 570 TTVISGCVENGEEE 583



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 140/274 (51%), Gaps = 13/274 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D I  A +   +  L     G Q+H  ++K+ F  D+F+ + ++ MY KCG      +
Sbjct: 497 KADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARK 556

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+++   + V+WT ++S  ++NGE +  L  Y  M+  G  P+E+   +++K C  + A
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  IH   +K+    +PFV  S+++ YAK G++  A  +F  +++  V  WNAMI G
Sbjct: 617 LEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVG 676

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLII 273
            A  G   EALN  + M   G+T D+ TFI  L  CS   L +D    FD  ++ +G   
Sbjct: 677 LAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYG--- 733

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
              VE  I   + L+D   ++  +  A KV   M
Sbjct: 734 ---VEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 214/675 (31%), Positives = 361/675 (53%), Gaps = 5/675 (0%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY KCG       +FD+M+ER++ +W  ++   + NGE    L+MY +M+  G   + + 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI- 206
              ++K C  +     G  IH  A+K   +   FV  S++  YAK  D+  A ++F  + 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
             +DV  WN++I  Y+  G   EAL + S ML  G+  + YTF  ALQ C   +   +G 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QIH  I++S     + + NAL+ MY++   M  A  +F  +  KD+++WN++  GF +N 
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +    F+    +  +P+ V+   ++   G+L  L  G ++   A+  GF     V +
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI M+ +C  +      FD +++K++ +W    +GY  N C    L+    +   G++V
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360

Query: 447 NGCTFFYVVETCCRSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           +  T    +   CR  N    + +IHG  I+ G S    + +++I  Y   G +D +   
Sbjct: 361 DA-TMIGSILLACRGLNCLGKIKEIHGYTIRGGLSD-PVLQNTIIDVYGECGIIDYAVRI 418

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
               E  D+ SW +M+S  VH G  ++A+ +F S+ E G +PD   L +IL++  ++   
Sbjct: 419 FESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTL 478

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ K IH F+I+ GF  E  +++ ++D YA+CG ++ A   F  + N N +I++  +I A
Sbjct: 479 KKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN-LILWTAMISA 537

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           Y  HG    A+E+F +MK   + P   TF++++ ACSH GLV++G    + M  +Y ++P
Sbjct: 538 YGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEP 597

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
            P+ Y CLVD+L R   LE+A  +++ M  +P+P V+ +LL  CRIH NKE+GE A+EKL
Sbjct: 598 WPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKL 657

Query: 746 LLLLPKNDAAHVLLS 760
           L L   N   +VL+S
Sbjct: 658 LELDLDNPGNYVLVS 672



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 253/528 (47%), Gaps = 6/528 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P+ L K+  + E+L     G ++HG  +K G  + +F+ N+L+A+Y+KC       ++FD
Sbjct: 62  PVLL-KACGIVEDL---FCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD 117

Query: 104 EMAERN-LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            M  RN +VSW  I+SA   NG     L ++ +M   G + N +   + ++ C      +
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   LK     + +V  +++  Y + G +  A  +F ++   D+  WN+M+ G+ 
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFI 237

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   EAL     +    +  D+ + I+ +     +     G++IH   I++  + +I 
Sbjct: 238 QNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNIL 297

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N LIDMY K   M Y  + F+ MA KD+ISW T   G+++NK   Q   L  +  + G
Sbjct: 298 VGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG 357

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              +      +L  C  L  L    ++    +  G L +  + +++I ++  CG ++ A 
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVLQNTIIDVYGECGIIDYAV 416

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +F+++  K++ +W  ++S Y  N      L+ F ++ E+G+E +  T   ++   C   
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             +   +IHG II+ GF   G I ++L+  Y   G ++++++     +  ++  W AM+S
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMIS 536

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           A    G+   AV +F  + +    PD      +L +C+  G     KS
Sbjct: 537 AYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKS 584



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 1/318 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + +   +  S  L   + G ++H + +K GF ++I + N LI MY+KC    +G 
Sbjct: 257 LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGG 316

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R FD MA ++L+SWT   +   QN  +   L++   ++  G   +   +GS++  C  + 
Sbjct: 317 RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLN 376

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  IH + ++  +  +P +  ++++ Y + G +  A R+F SI   DV  W +MI 
Sbjct: 377 CLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMIS 435

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y H G   +AL V SSM   G+  D  T ++ L     ++    G++IHG IIR     
Sbjct: 436 CYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFIL 495

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
             SI N L+DMY +   ++ A+K+F    ++++I W  +   +  +        LF +  
Sbjct: 496 EGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMK 555

Query: 340 LSGSRPNHVTFSILLRQC 357
                P+H+TF  LL  C
Sbjct: 556 DEKIIPDHITFLALLYAC 573



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 135/273 (49%), Gaps = 5/273 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++HG+ ++ G ++ + LQN +I +Y +CG   + +R+F+ +  +++VSWT ++S  + NG
Sbjct: 383 EIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNG 441

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L+++  MK  G  P+   + S++    S+   + G  IH F ++        +  
Sbjct: 442 LANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN 501

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YA+ G V  A ++F    + ++  W AMI  Y   GYG  A+ +   M  E I  
Sbjct: 502 TLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIP 561

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           D  TF+  L  CS     + G+    ++    ++E        L+D+  + + ++ A+++
Sbjct: 562 DHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQI 621

Query: 304 FERMADKDVIS-WNTLFGG--FSENKNPGQTAS 333
            + M ++     W  L G      NK  G+ A+
Sbjct: 622 VKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 88/186 (47%), Gaps = 2/186 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           ++ L  D + L   LS   +L +   G ++HG I++ GF  +  + N L+ MY++CG   
Sbjct: 455 ETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVE 514

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              ++F     RNL+ WT ++SA   +G  +  +++++ MK    +P+     +++  C 
Sbjct: 515 DAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574

Query: 157 SMGASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG-CW 214
             G    G S +     + ++E  P     +++   +   +  A ++  S+ ++     W
Sbjct: 575 HSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVW 634

Query: 215 NAMIGG 220
            A++G 
Sbjct: 635 CALLGA 640


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/638 (30%), Positives = 340/638 (53%), Gaps = 3/638 (0%)

Query: 124 GEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           G  +  L ++VD+ + +G  PNEF + SV++ C  +G  E G  +H F ++   +++ +V
Sbjct: 15  GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++FY+K GB+  A  VF  +       W  +I GY  CG    +L + + M    +
Sbjct: 75  GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+Y   + L  CS++   + G+QIH  ++R   E  +S+VN LID Y K + +    K
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F++M  K++ISW T+  G+ +N    +   LF +    G +P+    + +L  CG L  
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+    +       E V + LI M+ +   +  A  VFD ++ +N+ ++N ++ G
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y      ++ L+ F  +       +  TF  ++         ++  QIHG IIK G S  
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLD 374

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +  S+LI  Y     + ++          D+  W AM         N EA+ ++ +L  
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 434

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           + +KP+E+    ++ + + + + +  +  H  ++K+G +   +V +A++D YAKCG I+ 
Sbjct: 435 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 494

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  F+ S    DV+ +N++I  +A HG   EA+ +F +M    +QP+  TFV+V+SACS
Sbjct: 495 ARKMFNSSI-WRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G V+ G   F SM   +G++P  + Y C+V +L R+G L +AK  IE MP +P+  V+
Sbjct: 554 HAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVW 612

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RSLLS CRI GN ELG++A+E  +   PK+  +++LLS
Sbjct: 613 RSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 650



 Score =  248 bits (633), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/567 (26%), Positives = 278/567 (49%), Gaps = 8/567 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG +V+ GF  D+++  +LI  YSK G       VFD++ E+  V+WT I++   +
Sbjct: 56  GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTK 115

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G   + L+++  M+    +P+ + V SV+  C  +   E G  IH + L+   E +  V
Sbjct: 116 CGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 175

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++FY K   V A  ++F  +   ++  W  MI GY    + +EA+ +   M   G 
Sbjct: 176 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 235

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +   + L  C  +   + GRQ+H   I++ +E +  + N LIDMY KS+ +  A K
Sbjct: 236 KPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKK 295

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ MA+++VIS+N +  G+S  +   +   LFH+  +    P+ +TF  LL     L  
Sbjct: 296 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFA 355

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+L  Q+  L +  G   +    S+LI ++ +C  V+ A  VF+ ++ K+I  WN +  G
Sbjct: 356 LELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFG 415

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +  + + LK +  +  S  + N  TF  ++       + +   Q H  ++K G   C
Sbjct: 416 YTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 475

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ ++L+  Y   G ++ + +  N +   D+  W +M+S     G   EA+ +F  +++
Sbjct: 476 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 535

Query: 543 AGEKPDEYILGTILNSCAAIGAYQ----RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            G +P+      +L++C+  G  +       S+  F IK G  TE Y  + V+    + G
Sbjct: 536 EGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPG--TEHY--ACVVSLLGRSG 591

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMA 625
            +  A+   ++       IV+ +L+ A
Sbjct: 592 KLFEAKEFIEKMPIEPAAIVWRSLLSA 618



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 112/207 (54%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +S +L +  L  Q+HG I+K G + D+F  + LI +YSKC Y      VF+EM E+++
Sbjct: 347 LGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDI 406

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W  +     Q+ E +  LK+Y  ++ +   PNEF   +++    ++ +   G   H  
Sbjct: 407 VVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQ 466

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K+ ++  PFV  ++++ YAK G +  A ++F S    DV CWN+MI  +A  G   EA
Sbjct: 467 LVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEA 526

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCS 257
           L +   M+ EGI  +  TF+  L  CS
Sbjct: 527 LGMFREMMKEGIQPNYVTFVAVLSACS 553



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)

Query: 34  FCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           + +  F R+ P     A  ++ + NL S   G Q H  +VK+G     F+ N L+ MY+K
Sbjct: 429 YSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 488

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      ++F+    R++V W  ++S   Q+GE +  L M+ +M   G  PN     +V
Sbjct: 489 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 548

Query: 152 MKVCVSMGASEFG 164
           +  C   G  E G
Sbjct: 549 LSACSHAGXVEDG 561


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 209/706 (29%), Positives = 368/706 (52%), Gaps = 11/706 (1%)

Query: 63  GTQVHGHIVKLGFTN---DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           G QVH H V  G  N   D FL   L+ MY +CG      R+F+ M  R + SW  +V A
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 120 AIQNGEFDMGLKMYVDMKTN---GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            + +G     +++Y  M+ +   G  P+   + SV+K C + G    G  +H  A+K+ +
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVV 234
           +K+  V  +++  YAK G + +A RVF  +  D  DV  WN+++ G    G   EAL + 
Sbjct: 196 DKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALF 255

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M   G  M+ YT +  LQ C+ +    +GR++H  +++   E +I   NAL+ MY K 
Sbjct: 256 RGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKY 314

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A +VF ++A+KD ISWN++   + +N    +    F + +  G +P+H     L 
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              G L  L+ G +    A+      +  V ++L+ M+ +CG++E +  VF+++  ++  
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHI 434

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  +L+ +  +   ++ L+    + + G+ V+      ++ETCC  ++  ++ Q+H   
Sbjct: 435 SWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYA 494

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ G      + + LI  Y   G+ D+S       E+ D+ SW +M++   + G  + AV
Sbjct: 495 IRNGLLDL-ILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  + +A  +PD   L +IL + A + +  + K +H F+I+  F  E  V S+++D Y
Sbjct: 554 FLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMY 613

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           + CG +  A   F+++    DV+++  +I A   HG   +A+++F +M    L P   +F
Sbjct: 614 SGCGSMNYAIRVFERA-KCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSF 672

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           ++++ ACSH  LV++G      M S+Y ++P  + Y C+VD+L R+G  E+A   I+ MP
Sbjct: 673 LALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMP 732

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             P   V+ +LL  CR+H N  L   A+ KLL L P N   ++L+S
Sbjct: 733 MDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVS 778



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 5/204 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   L     L S   G QVHG +++  F  +  + ++L+ MYS CG   + +
Sbjct: 564 IQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAI 623

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF+    +++V WT +++A   +G     + ++  M   G  P+  +  +++  C    
Sbjct: 624 RVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSK 683

Query: 160 ASEFG-YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAM 217
             E G + +     K R++        V++   + G    A     ++  D     W A+
Sbjct: 684 LVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCAL 743

Query: 218 IGG-YAHCGYGFEALNVVSSMLFE 240
           +G    H  YG     V ++ L E
Sbjct: 744 LGACRVHRNYGLAV--VAANKLLE 765


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 200/692 (28%), Positives = 363/692 (52%), Gaps = 4/692 (0%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG-EFDMGL 130
           K+G   D      +I+  +  G       +  +M   + V+W  ++S   Q+G EF++ L
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV-L 310

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
            +Y DM++ G  P      S++    +M A   G  +H  A+   ++ N FVG S++N Y
Sbjct: 311 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 370

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK G  + A+ VF      ++  WNAM+ G+       EA+ +   M+   +  D++TF+
Sbjct: 371 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFV 430

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L  C+ ++ F +G+Q+H + I++ ++ S+ + NA +DMY K   +  A  +F  +  K
Sbjct: 431 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 490

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D ISWN L  G ++N    +   +  +  L G  P+ V+FS  +  C  +   + G Q+ 
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
           CLA+  G      V SSLI ++ + G VE +  +F  V   +I   N L++G+  N  + 
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSL 489
           + ++ F  + + G++ +  TF  ++  C  S N  +  Q+H   +K+G       +  SL
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 670

Query: 490 IKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
              Y+    L+++ +  +   +  ++  W A++S     G+   ++  F  +     + D
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSD 730

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           E    ++L +C+ + A+   K IH  + K GF +     SA+ID Y+KCGD+  +  AF 
Sbjct: 731 EATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFK 790

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +  N  D++ +N++I+ +A +G   EA+ +F KM+   ++P + TF+ V+ AC+H GL+ 
Sbjct: 791 ELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 850

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G   F SM   YG+ P  D Y C +D+L R G+L++A+  I+ +PF+P   V+ + L+ 
Sbjct: 851 EGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CR+H ++E G+ A+ KL+ L P+  + +VLLS
Sbjct: 911 CRMHKDEERGKIAARKLVELEPQYSSTYVLLS 942



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 305/648 (47%), Gaps = 8/648 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS + N+K+ V G Q+H   V  G   ++F+ ++LI +Y+KCG       VFD   
Sbjct: 328 FASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSC 387

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  +++  +QN   +  ++M+  M       +EF   S++  C  + +   G  
Sbjct: 388 EKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ 447

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC  +K  ++ + FV  + L+ Y+K G +  A+ +F  I   D   WNA+  G A    
Sbjct: 448 VHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLE 507

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ ++  M   GIT D  +F  A+  CS +   + G+QIH L I+  +  + ++ ++
Sbjct: 508 EEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS 567

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LID+Y K   ++ + K+F ++    ++  N L  GF +N N  +   LF + +  G +P+
Sbjct: 568 LIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPS 627

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTFS +L  C   L+  +G Q+ C  L  G L D+  +  SL  ++ +   +E A+ + 
Sbjct: 628 SVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 687

Query: 406 DNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             +  +KN+  W  ++SGY  N      L +F  +    V  +  TF  V++ C      
Sbjct: 688 TEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAF 747

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IHG I K+GF S     S+LI  Y   G + +SFE F     + D+  W +M+  
Sbjct: 748 ADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVG 807

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G+  EA+ +F  + E   KPDE     +L +C   G     +     + K+ G   
Sbjct: 808 FAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTP 867

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            +   +  ID   + G ++ A+ A DQ     D +V+ T + A   H    E        
Sbjct: 868 RLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK--DEERGKIAAR 925

Query: 643 KLANLQPS-QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           KL  L+P   +T+V + S  +  G   +  +  +SM  + G+   P C
Sbjct: 926 KLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREK-GVAKFPGC 972



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 165/678 (24%), Positives = 290/678 (42%), Gaps = 65/678 (9%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I++ G      L ++L+ +Y K G  G+         ER   + + ++S   ++G 
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 126 FDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               L  +  ++ T G  P++F +  V+  C  +G   +G  +HC  +K     + F   
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK GDV  A RVF  I+  D  CW++MI  Y   G   EAL + S M   G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+ T +                                    +I     S  +D+A  + 
Sbjct: 258 DQVTLVT-----------------------------------IISTLASSGRLDHATALL 282

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M     ++WN +  G +++        L+      G  P   TF+ +L     +    
Sbjct: 283 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 342

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+   A+  G      V SSLI ++ +CG    A +VFD    KNI  WN +L+G+ 
Sbjct: 343 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 402

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    + ++ F  +    ++ +  TF  ++  C    +  +  Q+H   IK       +
Sbjct: 403 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 462

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++ +  Y  +G + ++    +     D  SW A+   L       EAV +   +   G
Sbjct: 463 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 522

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             PD+    T +N+C+ I A +  K IH   IK G  +   V S++ID Y+K GD++ +R
Sbjct: 523 ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSR 582

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F Q  +++ ++  N LI  +  +    EA+++F ++    L+PS  TF S++S CS  
Sbjct: 583 KIFAQ-VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-- 639

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVD----------MLSRNGYLEDAKHVI 710
                      S++S  G Q    CY    G L D          +  ++  LEDA  ++
Sbjct: 640 ----------GSLNSAIGKQ--VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 687

Query: 711 EIMPFQPSPTVYRSLLSG 728
             MP   +   + +++SG
Sbjct: 688 TEMPDHKNLFEWTAIISG 705



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 295/682 (43%), Gaps = 42/682 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   LA  LS    +     G QVH  +VK GF++ +F +  L+ MY+KCG      R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD +A  + + W+ +++   + G +   L ++  M   G  P++  + +++    S G 
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +     H  AL   ++K P                           +     WNA+I G
Sbjct: 275 LD-----HATAL---LKKMP---------------------------TPSTVAWNAVISG 299

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +A  G  F  L +   M   G+   + TF + L   + +  F  G+Q+H   +   ++ +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + ++LI++Y K      A  VF+   +K+++ WN +  GF +N+ P +   +F   + 
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              + +  TF  +L  C  L    LG Q+ C+ +         V ++ + M+ + GA+  
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A ++F  + YK+  +WN L  G   N  + + +     +   G+  +  +F   +  C  
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   QIH   IK G  S   + SSLI  Y   G +++S +     +   +    A+
Sbjct: 540 IRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINAL 599

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG- 579
           ++  V   +  EA+ +F  +++ G KP      +IL+ C+        K +H + +K G 
Sbjct: 600 IAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGV 659

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              +  +  ++   Y K   ++ A     +  +  ++  +  +I  YA +G    ++  F
Sbjct: 660 LYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSF 719

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSP--DCYGCL 693
            +M+  N++  +ATF SV+ ACS       G     L+ KS    Y    S   D Y   
Sbjct: 720 WRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC 779

Query: 694 VDMLSRNGYLEDAKHVIEIMPF 715
            D++S     ++ K+  +IMP+
Sbjct: 780 GDVISSFEAFKELKNKQDIMPW 801



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 3/425 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D       L     L S  LG QVH   +K      +F+ N  + MYSK G  G   
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  ++ +SW  +     QN E +  + M   M+ +G  P++ +  + +  C ++ 
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A+E G  IHC A+K  I  N  VG S+++ Y+K GDV ++ ++F  + +  +   NA+I 
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+       EA+ +   +L +G+     TF + L GCS   +  IG+Q+H   ++S V  
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 661

Query: 280 SISIVN-ALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
             +++  +L  +Y+KS  ++ A K+   M D K++  W  +  G+++N     +   F +
Sbjct: 662 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWR 721

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                 R +  TF+ +L+ C  +     G ++  L    GF   E  TS+LI M+ +CG 
Sbjct: 722 MRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGD 781

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           V  +   F  +  K +I  WN ++ G+  N    + L  F  + E  ++ +  TF  V+ 
Sbjct: 782 VISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLI 841

Query: 457 TCCRS 461
            C  S
Sbjct: 842 ACTHS 846



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/459 (22%), Positives = 198/459 (43%), Gaps = 48/459 (10%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG I+R        + ++L+++Y KS  + YA+       ++   + ++L    + +
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 326 KNPGQTASLFHKFI--LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +PG     F ++I   +G RP+    +++L  C ++  L  G Q+ C  +  GF     
Sbjct: 136 GSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 194

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             ++L+ M+ +CG V  A  VFD ++  +   W+ +++ Y    C  + L  F  + + G
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 254

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
              +  T   ++ T   S                                   G+LD++ 
Sbjct: 255 SAPDQVTLVTIISTLASS-----------------------------------GRLDHAT 279

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                       +W A++S     G     + ++  +   G  P      ++L++ A + 
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A+   + +H   +  G +  V+V S++I+ YAKCG    A+  FD S   N ++++N ++
Sbjct: 340 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN-IVMWNAML 398

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDS 679
             +  + L  EA+ +F  M    LQ  + TFVS++ AC++      G    C+  K+   
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC-- 456

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
              M  S       +DM S+ G + DAK +  ++P++ S
Sbjct: 457 ---MDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDS 492



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 2/221 (0%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R+ + Q    +HG I++ G    G +  SL++ Y   G++  ++     A      +  +
Sbjct: 68  RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 127

Query: 520 MMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++S     G   + +  F  +   AG +PD++ L  +L++C+ +G     + +H  V+K 
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF++ V+  +A++D YAKCGD+  AR  FD      D I ++++I  Y   G   EA+ +
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFD-GIACPDTICWSSMIACYHRVGCYQEALAL 246

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           F +M      P Q T V+++S  +  G +D    L K M +
Sbjct: 247 FSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 287


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 203/685 (29%), Positives = 350/685 (51%), Gaps = 2/685 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G Q+H  I K G+ +D+ +   LI MY KCG      +VF+EM ERN+VSWT ++S  +
Sbjct: 219 FGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYV 278

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G+    L ++  +  +G  PN+ +  S++  C +      G  +H +  +  +E+   
Sbjct: 279 QHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVL 338

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ Y++ G +A A +VF ++ S +   WNAMI GY   G   EA  +  +M  +G
Sbjct: 339 VGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKG 397

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              DK+T+ + L  C+  AD D G+++H  I  +  +  +++  ALI MY K    + A 
Sbjct: 398 FQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEAR 457

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF +M +++VISWN        +    +    F +       P+H+TF  LL  C    
Sbjct: 458 KVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPE 517

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL+ G  +       G L   +V ++LI M+ RCG +  A  VF  +  +++ +WN +++
Sbjct: 518 DLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIA 577

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               +  +      F      G + +  TF  V+      E+      IHG + K GF  
Sbjct: 578 ANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGK 637

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LIK Y   G L ++    +  +  D+  W AM++A  H     +A+ +F  + 
Sbjct: 638 DIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQ 697

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G  PD     T LN+CA + A +  K IH  + + G  T+  V++++I+ Y++CG + 
Sbjct: 698 LEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLC 757

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+  F++   S D+  +N LI  Y  +G  + A+E ++ M  A++ P++ATF S++S+ 
Sbjct: 758 SAKQVFEKML-SRDINSWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSY 816

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +  G  ++     +S+  ++ M+PS   Y  +V  L R G L++A+  IE +  + +  +
Sbjct: 817 AQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALM 876

Query: 722 YRSLLSGCRIHGNKELGEWASEKLL 746
           + SLL  CRIH N EL E A E LL
Sbjct: 877 WESLLVACRIHLNVELAETAVEHLL 901



 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/668 (29%), Positives = 323/668 (48%), Gaps = 3/668 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F A+ L      KS   G +VH H+    F  DI+L N LI+MYSKCG       VF  M
Sbjct: 102 FYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAM 161

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            ++++VSW  ++S    +G       ++  M+  G  PN+    S++  C S  A EFG 
Sbjct: 162 EDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGE 221

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH    K   E +  V  +++N Y K G +  A +VF  +   +V  W AMI GY   G
Sbjct: 222 QIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 281

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EAL +   ++  GI  +K +F + L  C+   D   G ++H  I ++ +E  + + N
Sbjct: 282 DSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGN 341

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALI MY +   +  A +VF+ +   +  +WN +  G+ E     +   LF      G +P
Sbjct: 342 ALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLME-EAFRLFRAMEQKGFQP 400

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T++ LL  C    DLD G +L       G+  +  V ++LI M+ +CG+ E A  VF
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +  +N+ +WN  +S  C +    +  + F  +    V  +  TF  ++ +C   E+ +
Sbjct: 461 NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLE 520

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               IHG I + G  S  ++ ++LI  Y   G L ++ E      R D+ SW AM++A V
Sbjct: 521 RGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANV 580

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G N  A  +F      G K D+Y    +L + A +      + IH  V K GF  ++ 
Sbjct: 581 QHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIR 640

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V + +I  Y+KCG ++ A   F  +    DV+ +N ++ AYAH     +A+++F +M+L 
Sbjct: 641 VLTTLIKMYSKCGSLRDAENVFS-TVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLE 699

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P  +T+ + ++AC+    V+ G  +   +  + GM+        L++M SR G L  
Sbjct: 700 GVNPDSSTYSTALNACARLTAVEHGKKIHAQL-KEAGMETDTRVSNSLIEMYSRCGCLCS 758

Query: 706 AKHVIEIM 713
           AK V E M
Sbjct: 759 AKQVFEKM 766



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 132/469 (28%), Positives = 240/469 (51%), Gaps = 3/469 (0%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +   +   LQ C L      G+++H  +  ++ +  I + N LI MY K   ++ A
Sbjct: 95  GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M DKDV+SWN +  G++ +    + A LF++    G +PN  TF  +L  C   
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           + L+ G Q+       G+  + NV+++LI M+C+CG++E+A  VF+ +  +N+ +W  ++
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  +    + L  F  +  SG++ N  +F  ++  C    +     ++H  I + G  
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE 334

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++LI  Y   G L N+ +  +    L+  +W AM++    +G   EA  +F ++
Sbjct: 335 QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGY-GEGLMEEAFRLFRAM 393

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            + G +PD++   ++L  CA      R K +H  +   G+ T++ VA+A+I  YAKCG  
Sbjct: 394 EQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSP 453

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + AR  F+Q    N VI +N  I     H L  EA + F +M+  ++ P   TF++++++
Sbjct: 454 EEARKVFNQMPERN-VISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNS 512

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           C+    +++G  +   ++ Q+GM  +      L+ M  R G L DA+ V
Sbjct: 513 CTSPEDLERGRYIHGKIN-QWGMLSNNHVANALISMYGRCGNLADAREV 560



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 280/617 (45%), Gaps = 4/617 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H +I + G   ++ + N LI+MYS+CG      +VFD +   N  +W  ++ A   
Sbjct: 321 GLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMI-AGYG 379

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  +   +++  M+  GF P++F   S++ +C      + G  +H        + +  V
Sbjct: 380 EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTV 439

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ YAK G    A +VF  +   +V  WNA I        G EA      M  + +
Sbjct: 440 ATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDV 499

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  TFI  L  C+   D + GR IHG I +  +  +  + NALI MY +   +  A +
Sbjct: 500 NPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADARE 559

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF R+  +D+ SWN +     ++   G    LF K+   G + +  TF  +LR    L D
Sbjct: 560 VFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLED 619

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           LD G  +  L    GF  +  V ++LI M+ +CG++  A +VF  V  K++  WN +L+ 
Sbjct: 620 LDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAA 679

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    D LK F  +   GV  +  T+   +  C R    +   +IH  + + G  + 
Sbjct: 680 YAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETD 739

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + +SLI+ Y   G L ++ +        D+ SW A+++     G  + A+  +  ++ 
Sbjct: 740 TRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLR 799

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDI 600
           A   P++    +IL+S A +G  ++        IK  +N E      + ++ A  + G +
Sbjct: 800 ASIVPNKATFTSILSSYAQLGEEEQAFDFLE-SIKKEWNMEPSEQHYAYMVAALGRAGLL 858

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K A    ++    +  +++ +L++A   H  V  A    + +  A  Q S A    +MS 
Sbjct: 859 KEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASPAVCEQLMSI 918

Query: 661 CSHKGLVDKGCLLFKSM 677
            +  G  +   +L  +M
Sbjct: 919 YAAAGRWEDVSVLKTTM 935


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 224/730 (30%), Positives = 347/730 (47%), Gaps = 75/730 (10%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-------------------------- 103
           ++  G   D FL N L+ +YS  G     LR F                           
Sbjct: 36  VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95

Query: 104 -----EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
                 M +RN VSW  +++A  ++      L+MY  M   G  P  F + SV+  C ++
Sbjct: 96  RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A + G   H  A+K+ ++ N FV   +L  Y K G VA A R+F  +SS +   + AM+
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV--ADFDIGR------QIHG 270
           GG A  G   +AL + + M    I +D     + L  C+     D+++ R       IH 
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHA 275

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           L++R   +    + N+LIDMY K   MD A KVFE M+   ++SWN L  G+ +     +
Sbjct: 276 LVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYER 335

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +      SG  PN VT+S +L  C K  D                            
Sbjct: 336 ALEVLDLMQESGFEPNEVTYSNMLASCIKARD---------------------------- 367

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
                  V  A ++FD +S  ++TTWN LLSGY       D ++ F  +    V+ +  T
Sbjct: 368 -------VPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTT 420

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              ++ TC R    ++  Q+H A +K    +  ++ S LI  Y   GQ+  +    N   
Sbjct: 421 LAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMT 480

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+  W +M+S L     N EA   F  + E G  P E    +++NSCA + +  + + 
Sbjct: 481 ERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQ 540

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           IH  V+K G++  VYV S++ID YAKCG++  AR+ F+     N ++ +N +I  YA +G
Sbjct: 541 IHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKN-IVAWNEMIHGYAQNG 599

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +A+E+F+ M     +P   TF++V++ CSH GLVD+    F SM+S YG++P  + Y
Sbjct: 600 FGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHY 659

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            CL+D L R G   +   VI+ MP++    ++  LL+ C +H N ELGE+A++ L  L P
Sbjct: 660 TCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDP 719

Query: 751 KNDAAHVLLS 760
           KN + +VLLS
Sbjct: 720 KNPSPYVLLS 729



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 144/317 (45%), Gaps = 17/317 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L    LG QVH   VKL   ND+F+ + LI MYSKCG  G   
Sbjct: 414 VQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQ 473

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ M ER++V W  ++S    +   +     +  M+ NG  P E +  S++  C  + 
Sbjct: 474 IIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLS 533

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  IH   LK   ++N +VG S+++ YAK G++  A   F  +   ++  WN MI 
Sbjct: 534 SIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIH 593

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-------LVADFDIGRQIHGLI 272
           GYA  G+G +A+ +   ML      D  TFI  L GCS        +A F+     +G  
Sbjct: 594 GYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYG-- 651

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG--FSENKNPG 329
           IR  VE        LID   ++        V ++M  K D I W  L        N   G
Sbjct: 652 IRPLVEH----YTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELG 707

Query: 330 QTASLFHKFILSGSRPN 346
           + A+  H F L    P+
Sbjct: 708 EFAAK-HLFRLDPKNPS 723


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 209/713 (29%), Positives = 366/713 (51%), Gaps = 18/713 (2%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----GYFGWGLRVFDEMAERN 109
           S N   R+   Q+H H   L       LQ++++A+ ++         +  ++FD+   R+
Sbjct: 14  STNPILRIRRYQLHCHANPL-------LQSHVVALNARTLLRDSDPRFAQQLFDQTPLRD 66

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           L     ++    +  +    L ++V +  +G  P+ + +  V+ VC        G  +HC
Sbjct: 67  LKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHC 126

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +K  +  +  VG S+++ Y K G+V    RVF  +   DV  WN+++ GY+   +  +
Sbjct: 127 QCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQ 186

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
              +   M  EG   D YT    +   +      IG QIH L+++   E    + N+LI 
Sbjct: 187 VWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLIS 246

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           M  KS  +  A  VF+ M +KD +SWN++  G   N    +    F+   L+G++P H T
Sbjct: 247 MLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHAT 306

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV- 408
           F+ +++ C  L +L L   L C  L  G    +NV ++L+    +C  ++ A S+F  + 
Sbjct: 307 FASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMH 366

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +++ +W  ++SGY  N      +  F  +   GV+ N  T+     T    ++   + 
Sbjct: 367 GVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTY----STILTVQHAVFIS 422

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IH  +IKT +     + ++L+ ++V  G + ++ +     E  D+ +W AM++     G
Sbjct: 423 EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAG 482

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA-IGAYQRTKSIHPFVIKLGFNTEVYVA 587
              EA  IFH L   G KP+E+   +I+N+C A   + ++ K  H + IKL  N  + V+
Sbjct: 483 ETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVS 542

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           S+++  YAK G+I+ A   F +     D++ +N++I  YA HG   +A+E+F++M+  NL
Sbjct: 543 SSLVTLYAKRGNIESAHEIFKRQ-KERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNL 601

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +    TF+ V+SAC+H GLV KG   F  M + + + P+ + Y C++D+ SR G L  A 
Sbjct: 602 EVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAM 661

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +I  MPF P+ TV+R +L+  R+H N ELG+ A+EK++ L P++ AA+VLLS
Sbjct: 662 DIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLS 714


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 210/715 (29%), Positives = 366/715 (51%), Gaps = 7/715 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +++ L+     ++ + G  +H  ++K G       +N+LI+ YSKC       RVFDE+ 
Sbjct: 7   ISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEIP 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +   VSW+ +V+A   NG     ++ +  M+  G   NEFA+  V+K CV    +  G  
Sbjct: 65  DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DARLGAQ 121

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCG 225
           +H  A+      + FV  +++  Y   G +  A RVF    S+ +   WN ++  Y    
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +A+ V   M++ GI   ++ F   +  C+   + + GRQ+H +++R   +  +   N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY+K   +D A  +FE+M D DV+SWN L  G   N +  +   L  +   SG  P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T S +L+ C      DLG Q+    +      ++ +   L+ M+ +   ++ A  VF
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D + ++++   N L+SG        + L  F  + + G+ VN  T   V+++    E   
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAS 421

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              Q+H   +K GF    ++ + LI SY     L ++          D+ +  +M++AL 
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
              H   A+ +F  ++  G +PD ++L ++LN+CA++ AY++ K +H  +IK  F ++ +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             +A++  YAKCG I+ A +AF  S     V+ ++ +I   A HG    A+E+F +M   
Sbjct: 542 AGNALVYTYAKCGSIEDAELAF-SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P+  T  SV+ AC+H GLVD+    F SM   +G+  + + Y C++D+L R G L+D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A  ++  MPFQ + +++ +LL   R+H + ELG+ A+EKL +L P+    HVLL+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 242/516 (46%), Gaps = 5/516 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH  +V++G+  D+F  N L+ MY K G       +F++M + ++VSW  ++S  + 
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     +++ + MK +G +PN F + S++K C   GA + G  IH F +K   + + ++
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++ YAK   +  A +VF  +   D+   NA+I G +H G   EAL++   +  EG+
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +++ T    L+  + +      RQ+H L ++        +VN LID Y K S +  A +
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE  +  D+I+  ++    S+  +      LF + +  G  P+    S LL  C  L  
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G Q+    +   F+ +    ++L+Y + +CG++E A   F ++  + + +W+ ++ G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSS 481
              +      L+ F  + + G+  N  T   V+  C  +       +   ++ +  G   
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIFHS 539
                S +I      G+LD++ E  N    + + + WGA++ A  VH+      +     
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKL 700

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
            +   EK   ++L  + N+ A+ G +     +   +
Sbjct: 701 FILEPEKSGTHVL--LANTYASAGMWNEVAKVRKLM 734



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F +D F  N L+  Y+KCG      
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C   G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 200/692 (28%), Positives = 363/692 (52%), Gaps = 4/692 (0%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG-EFDMGL 130
           K+G   D      +I+  +  G       +  +M   + V+W  ++S   Q+G EF++ L
Sbjct: 262 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV-L 320

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
            +Y DM++ G  P      S++    +M A   G  +H  A+   ++ N FVG S++N Y
Sbjct: 321 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 380

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK G  + A+ VF      ++  WNAM+ G+       EA+ +   M+   +  D++TF+
Sbjct: 381 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFV 440

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L  C+ ++ F +G+Q+H + I++ ++ S+ + NA +DMY K   +  A  +F  +  K
Sbjct: 441 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 500

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D ISWN L  G ++N    +   +  +  L G  P+ V+FS  +  C  +   + G Q+ 
Sbjct: 501 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 560

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
           CLA+  G      V SSLI ++ + G VE +  +F  V   +I   N L++G+  N  + 
Sbjct: 561 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 620

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSL 489
           + ++ F  + + G++ +  TF  ++  C  S N  +  Q+H   +K+G       +  SL
Sbjct: 621 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 680

Query: 490 IKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
              Y+    L+++ +  +   +  ++  W A++S     G+   ++  F  +     + D
Sbjct: 681 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSD 740

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           E    ++L +C+ + A+   K IH  + K GF +     SA+ID Y+KCGD+  +  AF 
Sbjct: 741 EATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFK 800

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +  N  D++ +N++I+ +A +G   EA+ +F KM+   ++P + TF+ V+ AC+H GL+ 
Sbjct: 801 ELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 860

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G   F SM   YG+ P  D Y C +D+L R G+L++A+  I+ +PF+P   V+ + L+ 
Sbjct: 861 EGRHFFGSMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 920

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CR+H ++E G+ A+ KL+ L P+  + +VLLS
Sbjct: 921 CRMHKDEERGKIAARKLVELEPQYSSTYVLLS 952



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 305/648 (47%), Gaps = 8/648 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS + N+K+ V G Q+H   V  G   ++F+ ++LI +Y+KCG       VFD   
Sbjct: 338 FASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSC 397

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  +++  +QN   +  ++M+  M       +EF   S++  C  + +   G  
Sbjct: 398 EKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ 457

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC  +K  ++ + FV  + L+ Y+K G +  A+ +F  I   D   WNA+  G A    
Sbjct: 458 VHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLE 517

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ ++  M   GIT D  +F  A+  CS +   + G+QIH L I+  +  + ++ ++
Sbjct: 518 EEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS 577

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LID+Y K   ++ + K+F ++    ++  N L  GF +N N  +   LF + +  G +P+
Sbjct: 578 LIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPS 637

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTFS +L  C   L+  +G Q+ C  L  G L D+  +  SL  ++ +   +E A+ + 
Sbjct: 638 SVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 697

Query: 406 DNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             +  +KN+  W  ++SGY  N      L +F  +    V  +  TF  V++ C      
Sbjct: 698 TEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAF 757

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IHG I K+GF S     S+LI  Y   G + +SFE F     + D+  W +M+  
Sbjct: 758 ADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVG 817

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G+  EA+ +F  + E   KPDE     +L +C   G     +     + K+ G   
Sbjct: 818 FAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTP 877

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            +   +  ID   + G ++ A+ A DQ     D +V+ T + A   H    E        
Sbjct: 878 RLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK--DEERGKIAAR 935

Query: 643 KLANLQPS-QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           KL  L+P   +T+V + S  +  G   +  +  +SM  + G+   P C
Sbjct: 936 KLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREK-GVAKFPGC 982



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 165/678 (24%), Positives = 290/678 (42%), Gaps = 65/678 (9%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I++ G      L ++L+ +Y K G  G+         ER   + + ++S   ++G 
Sbjct: 88  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147

Query: 126 FDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               L  +  ++ T G  P++F +  V+  C  +G   +G  +HC  +K     + F   
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK GDV  A RVF  I+  D  CW++MI  Y   G   EAL + S M   G   
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+ T +                                    +I     S  +D+A  + 
Sbjct: 268 DQVTLVT-----------------------------------IISTLASSGRLDHATALL 292

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M     ++WN +  G +++        L+      G  P   TF+ +L     +    
Sbjct: 293 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 352

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+   A+  G      V SSLI ++ +CG    A +VFD    KNI  WN +L+G+ 
Sbjct: 353 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 412

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    + ++ F  +    ++ +  TF  ++  C    +  +  Q+H   IK       +
Sbjct: 413 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 472

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++ +  Y  +G + ++    +     D  SW A+   L       EAV +   +   G
Sbjct: 473 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 532

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             PD+    T +N+C+ I A +  K IH   IK G  +   V S++ID Y+K GD++ +R
Sbjct: 533 ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSR 592

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F Q  +++ ++  N LI  +  +    EA+++F ++    L+PS  TF S++S CS  
Sbjct: 593 KIFAQ-VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-- 649

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVD----------MLSRNGYLEDAKHVI 710
                      S++S  G Q    CY    G L D          +  ++  LEDA  ++
Sbjct: 650 ----------GSLNSAIGKQ--VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 697

Query: 711 EIMPFQPSPTVYRSLLSG 728
             MP   +   + +++SG
Sbjct: 698 TEMPDHKNLFEWTAIISG 715



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 295/682 (43%), Gaps = 42/682 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   LA  LS    +     G QVH  +VK GF++ +F +  L+ MY+KCG      R
Sbjct: 165 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 224

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD +A  + + W+ +++   + G +   L ++  M   G  P++  + +++    S G 
Sbjct: 225 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 284

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +     H  AL   ++K P                           +     WNA+I G
Sbjct: 285 LD-----HATAL---LKKMP---------------------------TPSTVAWNAVISG 309

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +A  G  F  L +   M   G+   + TF + L   + +  F  G+Q+H   +   ++ +
Sbjct: 310 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 369

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + ++LI++Y K      A  VF+   +K+++ WN +  GF +N+ P +   +F   + 
Sbjct: 370 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 429

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              + +  TF  +L  C  L    LG Q+ C+ +         V ++ + M+ + GA+  
Sbjct: 430 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 489

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A ++F  + YK+  +WN L  G   N  + + +     +   G+  +  +F   +  C  
Sbjct: 490 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 549

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   QIH   IK G  S   + SSLI  Y   G +++S +     +   +    A+
Sbjct: 550 IRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINAL 609

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG- 579
           ++  V   +  EA+ +F  +++ G KP      +IL+ C+        K +H + +K G 
Sbjct: 610 IAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGV 669

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              +  +  ++   Y K   ++ A     +  +  ++  +  +I  YA +G    ++  F
Sbjct: 670 LYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSF 729

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSP--DCYGCL 693
            +M+  N++  +ATF SV+ ACS       G     L+ KS    Y    S   D Y   
Sbjct: 730 WRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC 789

Query: 694 VDMLSRNGYLEDAKHVIEIMPF 715
            D++S     ++ K+  +IMP+
Sbjct: 790 GDVISSFEAFKELKNKQDIMPW 811



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 3/425 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D       L     L S  LG QVH   +K      +F+ N  + MYSK G  G   
Sbjct: 432 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 491

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  ++ +SW  +     QN E +  + M   M+ +G  P++ +  + +  C ++ 
Sbjct: 492 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 551

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A+E G  IHC A+K  I  N  VG S+++ Y+K GDV ++ ++F  + +  +   NA+I 
Sbjct: 552 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 611

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+       EA+ +   +L +G+     TF + L GCS   +  IG+Q+H   ++S V  
Sbjct: 612 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 671

Query: 280 SISIVN-ALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
             +++  +L  +Y+KS  ++ A K+   M D K++  W  +  G+++N     +   F +
Sbjct: 672 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWR 731

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                 R +  TF+ +L+ C  +     G ++  L    GF   E  TS+LI M+ +CG 
Sbjct: 732 MRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGD 791

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           V  +   F  +  K +I  WN ++ G+  N    + L  F  + E  ++ +  TF  V+ 
Sbjct: 792 VISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLI 851

Query: 457 TCCRS 461
            C  S
Sbjct: 852 ACTHS 856



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/459 (22%), Positives = 198/459 (43%), Gaps = 48/459 (10%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG I+R        + ++L+++Y KS  + YA+       ++   + ++L    + +
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 145

Query: 326 KNPGQTASLFHKFI--LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +PG     F ++I   +G RP+    +++L  C ++  L  G Q+ C  +  GF     
Sbjct: 146 GSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 204

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             ++L+ M+ +CG V  A  VFD ++  +   W+ +++ Y    C  + L  F  + + G
Sbjct: 205 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 264

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
              +  T   ++ T   S                                   G+LD++ 
Sbjct: 265 SAPDQVTLVTIISTLASS-----------------------------------GRLDHAT 289

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                       +W A++S     G     + ++  +   G  P      ++L++ A + 
Sbjct: 290 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 349

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A+   + +H   +  G +  V+V S++I+ YAKCG    A+  FD S   N ++++N ++
Sbjct: 350 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN-IVMWNAML 408

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDS 679
             +  + L  EA+ +F  M    LQ  + TFVS++ AC++      G    C+  K+   
Sbjct: 409 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC-- 466

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
              M  S       +DM S+ G + DAK +  ++P++ S
Sbjct: 467 ---MDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDS 502



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 2/221 (0%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R+ + Q    +HG I++ G    G +  SL++ Y   G++  ++     A      +  +
Sbjct: 78  RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 137

Query: 520 MMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++S     G   + +  F  +   AG +PD++ L  +L++C+ +G     + +H  V+K 
Sbjct: 138 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 197

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF++ V+  +A++D YAKCGD+  AR  FD      D I ++++I  Y   G   EA+ +
Sbjct: 198 GFSSSVFCEAALVDMYAKCGDVPNARRVFD-GIACPDTICWSSMIACYHRVGCYQEALAL 256

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           F +M      P Q T V+++S  +  G +D    L K M +
Sbjct: 257 FSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 297


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 198/733 (27%), Positives = 380/733 (51%), Gaps = 39/733 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--------------- 107
           G Q H  ++  GF  D+++ N L+ MY +C +  +  +VF++M++               
Sbjct: 62  GKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYAD 121

Query: 108 ----------------RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN---GFMPNEFAV 148
                           R++VSW  ++S  +QNGE    + +++DM  +   GF    FAV
Sbjct: 122 AGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAV 181

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             V+K C  +     G  +H   +++   K+   G ++L+ YAK   +  + ++F  I  
Sbjct: 182 --VLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPV 239

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +  CW+A+I G          L +   M   GI + +  + +  + C+ ++   +G Q+
Sbjct: 240 KNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQL 299

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H   ++ +    I++  A +DMY K   +  A ++F  +    +  +N +  G   N+  
Sbjct: 300 HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKG 359

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLL-DLDLGLQLQCLALHCGFLDEENVTSS 387
            +    F   + SG   N ++ S     C  +  DLD G QL  L++         V +S
Sbjct: 360 FEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANS 418

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           ++ M+ +C A+  A  +FD +  ++  +WN +++ +  N  + + L  F ++    +E +
Sbjct: 419 ILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPD 478

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T+  V++ C   +      +IH  IIK+G     ++  +LI  Y   G ++ + +  +
Sbjct: 479 QFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHD 538

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
             E+  M SW A+++      H+ +A + F+ +++   KPD +    +L++CA + +   
Sbjct: 539 RIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGL 598

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH  +IKL  +++VY+ S ++D Y+KCG+++ + + F+++ N  D + +N +I  YA
Sbjct: 599 GKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPN-KDFVTWNAMICGYA 657

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HGL  EA+  F++M+L N++P+ ATFVS++ AC+H G +DKG   F +M ++YG++P  
Sbjct: 658 QHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQI 717

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           + Y C++D++ R+G + +A  +I+ MPF+    ++R+LLS C+IHGN E+ E A+  +L 
Sbjct: 718 EHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQ 777

Query: 748 LLPKNDAAHVLLS 760
           L P++ +A +LLS
Sbjct: 778 LEPEDSSACILLS 790



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 289/591 (48%), Gaps = 11/591 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG IV++GF  D+   + L+ MY+KC      L++F E+  +N V W+ I++  +
Sbjct: 194 LGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCV 253

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN E  +GL+++ +M+  G   ++    SV + C  + A + G  +H  ALK     +  
Sbjct: 254 QNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDIT 313

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG + L+ YAK G +A A+R+F S+    + C+NA+I G      GFEAL     +L  G
Sbjct: 314 VGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSG 373

Query: 242 ITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           +  ++ +   A   C S+  D D GRQ+H L ++S +  +I + N+++DMY K   +  A
Sbjct: 374 LGFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEA 432

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M  +D +SWN +     +N N  +T +LF   +     P+  T+  +L+ C   
Sbjct: 433 CCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQ 492

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G+++    +  G   +  V  +LI M+C+CG +E A  + D +  + + +WN ++
Sbjct: 493 QALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAII 552

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G+       D    F  + +  V+ +  T+  V++ C    +  +  QIHG IIK    
Sbjct: 553 AGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELH 612

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  YI S+L+  Y   G + +S      A   D  +W AM+      G   EA+  F  +
Sbjct: 613 SDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERM 672

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDAYAKC 597
                +P+     +IL +CA +G     K +H F   + + G   ++   S +ID   + 
Sbjct: 673 QLENVRPNHATFVSILRACAHMGFID--KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRS 730

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           G I  A     +     D +++ TL+     HG     +EI +K   A LQ
Sbjct: 731 GRISEALKLIQEMPFEADAVIWRTLLSICKIHG----NIEIAEKATNAILQ 777



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 191/391 (48%), Gaps = 2/391 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q    S L  + I L+ + S   ++K  + G Q+H   VK    ++I + N+++ MY KC
Sbjct: 367 QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKC 426

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   +FDEM  R+ VSW  +++A  QNG  +  L ++  M      P++F  GSV+
Sbjct: 427 EALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVL 486

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C S  A   G  IH   +K  +  + FVG ++++ Y K G +  A+++   I    + 
Sbjct: 487 KACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMV 546

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WNA+I G+    +  +A +    ML   +  D +T+   L  C+ +A   +G+QIHG I
Sbjct: 547 SWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQI 606

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+   + I + L+DMY K   M  +  VFE+  +KD ++WN +  G++++    +  
Sbjct: 607 IKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEAL 666

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
             F +  L   RPNH TF  +LR C  +  +D GL     +    G   +    S +I +
Sbjct: 667 GYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDI 726

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
             R G +  A  +   + ++ +   W  LLS
Sbjct: 727 IGRSGRISEALKLIQEMPFEADAVIWRTLLS 757



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 237/513 (46%), Gaps = 35/513 (6%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF + +Q CS       G+Q H  +I S     + I N L+ MY++ S ++YA+KVFE+M
Sbjct: 45  TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKF----------ILSGSRPN----------- 346
           + +DVIS+NT+  G+++          F+            +LSG   N           
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164

Query: 347 -----------HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
                        TF+++L+ C  L D  LG+Q+  L +  GF  +    S+L+ M+ +C
Sbjct: 165 DMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKC 224

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
             ++ +  +F  +  KN   W+ +++G   N      L+ F  + + G+ V+   +  V 
Sbjct: 225 KRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVF 284

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
            +C      ++  Q+H   +K  F S   + ++ +  Y   G L ++    N   +  + 
Sbjct: 285 RSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQ 344

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
            + A++   V      EA+  F  L+++G   +E  L    ++CA+I      + +H   
Sbjct: 345 CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLS 404

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           +K    + + VA++++D Y KC  +  A   FD+     D + +N +I A+  +G   E 
Sbjct: 405 VKSTLRSNICVANSILDMYGKCEALSEACCMFDE-MERRDAVSWNAVIAAHEQNGNEEET 463

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           + +F  M    ++P Q T+ SV+ ACS +  ++ G  +   +  + G+       G L+D
Sbjct: 464 LNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRI-IKSGLGLDSFVGGALID 522

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           M  + G +E+AK + + +  Q +   + ++++G
Sbjct: 523 MYCKCGMIEEAKKIHDRIE-QQTMVSWNAIIAG 554


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 205/737 (27%), Positives = 373/737 (50%), Gaps = 33/737 (4%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N ++   G + H H++  GFT  +F+ N LI MY KC    +  +VF+EM +R++VSW  
Sbjct: 36  NRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNT 95

Query: 116 IV--------------------------------SAAIQNGEFDMGLKMYVDMKTNGFMP 143
           +V                                S  +QNG+    + +++ M+  G M 
Sbjct: 96  MVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMF 155

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           +   +   +K+C  +     G  IH  A+++  + +   G ++++ YAK   +  +  VF
Sbjct: 156 DHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVF 215

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   +   W+A I G          L +   M  +GI + + T+ +  + C+ ++   
Sbjct: 216 SELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASR 275

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G Q+H   ++++    + +  A +DMY K   M  A+K+F  + D ++ S+N +  G++
Sbjct: 276 LGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYA 335

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            N+   Q   LF +   +    + V+ S  L     +     GLQL  LA+         
Sbjct: 336 RNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNIC 395

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++++ M+ +CGA+  A  +FD +  ++  +WN +++    N  +   L  F  +  S 
Sbjct: 396 VANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSK 455

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           +E +  T+  V++ C          ++HG IIK+G     ++ S+L+  Y   G ++ + 
Sbjct: 456 MEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAE 515

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +     E   M SW A++S    Q  + ++   F  ++E G +PD +   T+L++CA + 
Sbjct: 516 KIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLA 575

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
                K IH  +IKL   ++VY+ S ++D Y+KCG++  + + F ++    D + +N +I
Sbjct: 576 TVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA-PKRDSVTWNAMI 634

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             +A+HGL  EA+E+F+ M   N++P+ ATFVSV+ ACSH G   KG   F+ M S Y +
Sbjct: 635 CGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYAL 694

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           +P  + Y C+VD+L R+G +E+A  +I+ MPF+    ++R+LLS C+I GN E+ E A+ 
Sbjct: 695 EPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAAS 754

Query: 744 KLLLLLPKNDAAHVLLS 760
            LL L P++ +A+ LLS
Sbjct: 755 SLLKLDPEDSSAYTLLS 771



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 179/658 (27%), Positives = 325/658 (49%), Gaps = 23/658 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA SL +   L+ +VLG Q+HG  V++GF  D+   + L+ MY+KC      L VF
Sbjct: 156 DHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVF 215

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            E+ ++N +SW+  ++  +QN +   GLK++ +M+  G   ++    SV + C  + AS 
Sbjct: 216 SELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASR 275

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +HC ALK     +  VG + L+ YAK  +++ A ++F  +   ++  +NAMI GYA
Sbjct: 276 LGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYA 335

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
               GF+A  +   +     + D+ +   AL   +++     G Q+HGL I+S +  +I 
Sbjct: 336 RNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNIC 395

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++DMY K   +  A  +F+ M  +D +SWN +     +N++ G+T S F   + S 
Sbjct: 396 VANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSK 455

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+  T+  +L+ C        G+++    +  G   +  V S+L+ M+ +CG +E A 
Sbjct: 456 MEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAE 515

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +   +  + + +WN ++SG+       D  + F ++ E GVE +  T+  V++TC    
Sbjct: 516 KIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLA 575

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
              +  QIH  +IK    S  YI S+L+  Y   G + +S      A + D  +W AM+ 
Sbjct: 576 TVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMIC 635

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFV 575
              + G   EA+ +F  ++    KP+     ++L +C+ +G        +Q+  SI+   
Sbjct: 636 GFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALE 695

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            +L    E Y  S ++D   + G ++ A R+  D  F + D I++ TL+      G V  
Sbjct: 696 PQL----EHY--SCMVDILGRSGQVEEALRLIQDMPFEA-DAIIWRTLLSICKIQGNV-- 746

Query: 635 AMEIFDKM--KLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             E+ +K    L  L P  ++  +++S   +  G+  +   + ++M S + ++  P C
Sbjct: 747 --EVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRS-HNLKKEPGC 801



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 148/636 (23%), Positives = 273/636 (42%), Gaps = 42/636 (6%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           + + C +  A + G   H   +        FV   ++  Y K   +  A +VF  +   D
Sbjct: 30  IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRD 89

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFE------------------------------ 240
           +  WN M+ G A  G    A  V +SM                                 
Sbjct: 90  IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149

Query: 241 --GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+  D  T   +L+ CSL+ D  +G QIHG+ ++   +  +   +AL+DMY K + ++
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLE 209

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            +  VF  + DK+ ISW+    G  +N    +   LF +    G   +  T++ + R C 
Sbjct: 210 DSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCA 269

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L    LG QL C AL   F  +  V ++ + M+ +C  +  A+ +F  +   N+ ++N 
Sbjct: 270 GLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNA 329

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ GY  N       K F  + ++    +  +    +      +      Q+HG  IK+ 
Sbjct: 330 MIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSN 389

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            SS   + ++++  Y   G L  +    +  E  D  SW A+++A        + ++ F 
Sbjct: 390 LSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFG 449

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +++ +  +PDE+  G++L +CA   A+     +H  +IK G   +++V SA++D Y+KCG
Sbjct: 450 AMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCG 509

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A            ++ +N +I  ++      ++   F  M    ++P   T+ +V+
Sbjct: 510 MMEEAE-KIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVL 568

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQ 716
             C++   V  G  +   M     ++   D Y    LVDM S+ G + D+  +    P +
Sbjct: 569 DTCANLATVGLGKQIHAQM---IKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKR 625

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
            S T + +++ G   HG   LGE A E    +L +N
Sbjct: 626 DSVT-WNAMICGFAYHG---LGEEALELFEHMLHEN 657



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/497 (24%), Positives = 227/497 (45%), Gaps = 36/497 (7%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + TF +  Q CS       G++ H  +I S    ++ + N LI MY+K   ++YA+KVFE
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 306 RMADKDVISWNT--------------------------------LFGGFSENKNPGQTAS 333
            M  +D++SWNT                                L  G+ +N +  ++ +
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT-SSLIYMF 392
           +F K    G   +H T ++ L+ C  L D  LG+Q+  +A+  GF D + VT S+L+ M+
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGF-DYDVVTGSALVDMY 202

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +C ++E +  VF  +  KN  +W+  ++G   N      LK F  +   G+ V+  T+ 
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYA 262

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            V  +C      ++  Q+H   +KT F S   + ++ +  Y     + ++++  +     
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           ++ S+ AM+          +A  +F  L +     DE  L   L++ A I  +     +H
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
              IK   ++ + VA+A++D Y KCG +  A   FD+     D + +N +I A   +   
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDE-MEIRDPVSWNAIITACEQNESE 441

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
            + +  F  M  + ++P + T+ SV+ AC+ +     G  +   +  + GM         
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRI-IKSGMGLKMFVGSA 500

Query: 693 LVDMLSRNGYLEDAKHV 709
           LVDM S+ G +E+A+ +
Sbjct: 501 LVDMYSKCGMMEEAEKI 517


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 199/696 (28%), Positives = 356/696 (51%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   V  G   D  + N LI +Y+K G      +VF E++ R+ VSW  ++S   Q G
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                 ++Y  M     +P  + + SV+  C        G  IH    K       FVG 
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y   G    AERVF  +   D   +N +I G+A CG+G  AL +   M   G+  
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V D   G+Q+H  ++++ +        +L+D+Y+K   ++ A  +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   + +  +  ++  +F +   +G  PN  T+  +LR C     ++
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIE 363

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ +   ++ A  + + +  +++ +W  +++GY 
Sbjct: 364 LGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L TF  + + GV  +          C   +  +   QIH  +  +G+++   
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADIS 483

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G+ + +F      +  D  +W  ++S         +A+ +F  + +AG
Sbjct: 484 IWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAG 543

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + +++ A +   ++ K +H   +K G  +E  VA+A+I  Y KCG I+ A+
Sbjct: 544 AKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAK 603

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA+++FD+MK   L+P+  TF+ V++ACSH 
Sbjct: 604 MIFSEMSLRNEV-SWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHV 662

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   FKSM + YG+ P PD Y C+VD+L R G L+ A+  ++ MP   +  ++R+
Sbjct: 663 GLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRT 722

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE A++ LL L P + A++VLLS
Sbjct: 723 LLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLS 758



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/624 (24%), Positives = 295/624 (47%), Gaps = 4/624 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     K    G  +H  + K  F ++ F+ N LIA+Y   G F    RVF 
Sbjct: 144 PYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFC 203

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M   + V++  ++S   Q G  +  L+++ +M+ +G  P+   V S++  C S+G  + 
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + LK  +  +     S+L+ Y K GD+  A  +F      +V  WN M+  Y  
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQ 323

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +K+T+   L+ C+     ++G QIH L I++  E  + +
Sbjct: 324 ISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYV 383

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   +D A K+ E +  +DV+SW ++  G+ ++    +  + F +    G 
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +     C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG  E A S
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFS 503

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F  + +K+  TWN L+SG+  +      L  F  + ++G + N  TF   +       +
Sbjct: 504 LFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLAD 563

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   Q+HG  +KTG +S   + ++LI  Y   G ++++    +     +  SW  ++++
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G   EA+ +F  + + G KP++     +L +C+ +G  +   S    +  + G N 
Sbjct: 624 CSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNP 683

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                + V+D   + G +  AR   D+   + + +++ TL+ A   H  + E  E+  K 
Sbjct: 684 IPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNI-EIGELAAK- 741

Query: 643 KLANLQP-SQATFVSVMSACSHKG 665
            L  L+P   A++V + +A +  G
Sbjct: 742 HLLELEPHDSASYVLLSNAYAVTG 765



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 199/421 (47%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR D + +A  L+   ++     G Q+H +++K G + D   + +L+ +Y KCG    
Sbjct: 239 SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIET 298

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +F+     N+V W L++ A  Q  +     +++  M+  G  PN+F    +++ C  
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTC 358

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            G  E G  IH  ++K   E + +V   +++ Y+K   +  A ++   +   DV  W +M
Sbjct: 359 TGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSM 418

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY    +  EAL     M   G+  D     +A   C+ +     G QIH  +  S  
Sbjct: 419 IAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGY 478

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              ISI N L+++Y +    + AF +F  +  KD I+WN L  GF +++   Q   +F K
Sbjct: 479 AADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMK 538

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +G++ N  TF   +     L D+  G Q+   A+  G   E  V ++LI ++ +CG+
Sbjct: 539 MSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGS 598

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E A  +F  +S +N  +WN +++    +    + L  F  + + G++ N  TF  V+  
Sbjct: 599 IEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAA 658

Query: 458 C 458
           C
Sbjct: 659 C 659



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/356 (24%), Positives = 177/356 (49%), Gaps = 16/356 (4%)

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           L L++   ++  G   +  + + LI ++ + G V  A  VF  +S ++  +W  +LSGY 
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYA 120

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                 +  + +  +  + V         V+  C + +       IH  + K  F S  +
Sbjct: 121 QRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERL-------DMASWGAMMSALVHQGHNHEAVTIF 537
           + ++LI  Y+ FG    SF+    AER+       D  ++  ++S     GH   A+ IF
Sbjct: 181 VGNALIALYLGFG----SFKL---AERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +  +G +PD   + ++L +CA++G  Q+ K +H +++K G + +     +++D Y KC
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC 293

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           GDI+ A   F+    +N V+++N +++AY     ++++ EIF +M+   + P++ T+  +
Sbjct: 294 GDIETAHDIFNLGDRTN-VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCI 352

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +  C+  G ++ G  +  S+  + G +      G L+DM S+   L+ A+ ++E++
Sbjct: 353 LRTCTCTGQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEML 407



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 131/294 (44%), Gaps = 16/294 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA + S    +K+   G Q+H  +   G+  DI + N L+ +Y++CG       +F
Sbjct: 446 DNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLF 505

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            E+  ++ ++W  ++S   Q+  ++  L +++ M   G   N F   S +    ++   +
Sbjct: 506 REIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIK 565

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H  A+K        V  ++++ Y K G +  A+ +F  +S  +   WN +I   +
Sbjct: 566 QGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCS 625

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGL-IIR 274
             G G EAL++   M  EG+  +  TFI  L  CS V   + G         ++GL  I 
Sbjct: 626 QHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIP 685

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
               C       ++D+  ++  +D A +  + M    + + W TL      +KN
Sbjct: 686 DHYAC-------VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKN 732



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 4/254 (1%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R     +V +IH   +  G  +   I + LI  Y   G +  + +        D  SW A
Sbjct: 55  RGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVA 114

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+S    +G   EA  ++  +      P  Y+L ++L++C     + + + IH  V K  
Sbjct: 115 MLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAF-DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           F +E +V +A+I  Y   G  K A   F D  F   D + +NTLI  +A  G    A++I
Sbjct: 175 FCSETFVGNALIALYLGFGSFKLAERVFCDMLF--CDRVTFNTLISGHAQCGHGECALQI 232

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           FD+M+L+ L+P   T  S+++AC+  G + KG  L   +  + GM       G L+D+  
Sbjct: 233 FDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL-LKAGMSFDYITEGSLLDLYV 291

Query: 699 RNGYLEDAKHVIEI 712
           + G +E A  +  +
Sbjct: 292 KCGDIETAHDIFNL 305


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 199/692 (28%), Positives = 362/692 (52%), Gaps = 4/692 (0%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG-EFDMGL 130
           K+G   D      +I+  +  G       +  +M   + V+W  ++S   Q+G EF++ L
Sbjct: 252 KMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV-L 310

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
            +Y DM++ G  P      S++    +M A   G  +H  A+   ++ N FVG S++N Y
Sbjct: 311 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 370

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK G  + A+ VF      ++  WNAM+ G+       EA+ +   M+   +  D++TF+
Sbjct: 371 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFV 430

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L  C+ ++ F +G+Q+H + I++ ++ S+ + NA +DMY K   +  A  +F  +  K
Sbjct: 431 SILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYK 490

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D ISWN L  G ++N    +   +  +  L G  P+ V+FS  +  C  +   + G Q+ 
Sbjct: 491 DSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIH 550

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
           CLA+  G      V SSLI ++ + G VE +  +F  V   +I   N L++G+  N  + 
Sbjct: 551 CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNED 610

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSL 489
           + ++ F  + + G++ +  TF  ++  C  S N  +  Q+H   +K+G       +  SL
Sbjct: 611 EAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSL 670

Query: 490 IKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
              Y+    L+++ +  +   +  ++  W A++S     G+   ++  F  +     + D
Sbjct: 671 AGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSD 730

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           E    ++L +C+ + A+   K IH  + K GF +     SA+ID Y+KCGD+  +  AF 
Sbjct: 731 EATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFK 790

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +  N  D++ +N++I+ +A +G   EA+ +F KM+   ++P + TF+ V+ AC+H GL+ 
Sbjct: 791 ELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLIS 850

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G   F  M   YG+ P  D Y C +D+L R G+L++A+  I+ +PF+P   V+ + L+ 
Sbjct: 851 EGRHFFGPMRKVYGLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAA 910

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CR+H ++E G+ A+ KL+ L P+  + +VLLS
Sbjct: 911 CRMHKDEERGKIAARKLVELEPQYSSTYVLLS 942



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 303/648 (46%), Gaps = 8/648 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS + N+K+ V G Q+H   V  G   ++F+ ++LI +Y+KCG       VFD   
Sbjct: 328 FASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSC 387

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  +++  +QN   +  ++M+  M       +EF   S++  C  + +   G  
Sbjct: 388 EKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQ 447

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC  +K  ++ + FV  + L+ Y+K G +  A+ +F  I   D   WNA+  G A    
Sbjct: 448 VHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLE 507

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ ++  M   GIT D  +F  A+  CS +   + G+QIH L I+  +  + ++ ++
Sbjct: 508 EEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSS 567

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LID+Y K   ++ + K+F ++    ++  N L  GF +N N  +   LF + +  G +P+
Sbjct: 568 LIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPS 627

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
            VTFS +L  C   L+  +G Q+ C  L  G L D+  +  SL  ++ +   +E A+ + 
Sbjct: 628 SVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 687

Query: 406 DNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             +  +KN+  W  ++SGY  N      L +F  +    V  +  TF  V++ C      
Sbjct: 688 TEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAF 747

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IHG I K+GF S     S+LI  Y   G + +SFE F     + D+  W +M+  
Sbjct: 748 ADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVG 807

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH-PFVIKLGFNT 582
               G+  EA+ +F  + E   KPDE     +L +C   G     +    P     G   
Sbjct: 808 FAKNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTP 867

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            +   +  ID   + G ++ A+ A DQ     D +V+ T + A   H    E        
Sbjct: 868 RLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHK--DEERGKIAAR 925

Query: 643 KLANLQPS-QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           KL  L+P   +T+V + S  +  G   +  +  +SM  + G+   P C
Sbjct: 926 KLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREK-GVAKFPGC 972



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 165/678 (24%), Positives = 290/678 (42%), Gaps = 65/678 (9%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I++ G      L ++L+ +Y K G  G+         ER   + + ++S   ++G 
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 126 FDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               L  +  ++ T G  P++F +  V+  C  +G   +G  +HC  +K     + F   
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK GDV  A RVF  I+  D  CW++MI  Y   G   EAL + S M   G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+ T +                                    +I     S  +D+A  + 
Sbjct: 258 DQVTLVT-----------------------------------IISTLASSGRLDHATALL 282

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M     ++WN +  G +++        L+      G  P   TF+ +L     +    
Sbjct: 283 KKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 342

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+   A+  G      V SSLI ++ +CG    A +VFD    KNI  WN +L+G+ 
Sbjct: 343 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 402

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    + ++ F  +    ++ +  TF  ++  C    +  +  Q+H   IK       +
Sbjct: 403 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 462

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++ +  Y  +G + ++    +     D  SW A+   L       EAV +   +   G
Sbjct: 463 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 522

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             PD+    T +N+C+ I A +  K IH   IK G  +   V S++ID Y+K GD++ +R
Sbjct: 523 ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSR 582

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F Q  +++ ++  N LI  +  +    EA+++F ++    L+PS  TF S++S CS  
Sbjct: 583 KIFAQ-VDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS-- 639

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVD----------MLSRNGYLEDAKHVI 710
                      S++S  G Q    CY    G L D          +  ++  LEDA  ++
Sbjct: 640 ----------GSLNSAIGKQ--VHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLL 687

Query: 711 EIMPFQPSPTVYRSLLSG 728
             MP   +   + +++SG
Sbjct: 688 TEMPDHKNLFEWTAIISG 705



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 158/682 (23%), Positives = 295/682 (43%), Gaps = 42/682 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   LA  LS    +     G QVH  +VK GF++ +F +  L+ MY+KCG      R
Sbjct: 155 RPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARR 214

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD +A  + + W+ +++   + G +   L ++  M   G  P++  + +++    S G 
Sbjct: 215 VFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLASSGR 274

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +     H  AL   ++K P                           +     WNA+I G
Sbjct: 275 LD-----HATAL---LKKMP---------------------------TPSTVAWNAVISG 299

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +A  G  F  L +   M   G+   + TF + L   + +  F  G+Q+H   +   ++ +
Sbjct: 300 HAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN 359

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + ++LI++Y K      A  VF+   +K+++ WN +  GF +N+ P +   +F   + 
Sbjct: 360 VFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              + +  TF  +L  C  L    LG Q+ C+ +         V ++ + M+ + GA+  
Sbjct: 420 YTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGD 479

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A ++F  + YK+  +WN L  G   N  + + +     +   G+  +  +F   +  C  
Sbjct: 480 AKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSN 539

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   QIH   IK G  S   + SSLI  Y   G +++S +     +   +    A+
Sbjct: 540 IRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINAL 599

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG- 579
           ++  V   +  EA+ +F  +++ G KP      +IL+ C+        K +H + +K G 
Sbjct: 600 IAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGV 659

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              +  +  ++   Y K   ++ A     +  +  ++  +  +I  YA +G    ++  F
Sbjct: 660 LYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSF 719

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSP--DCYGCL 693
            +M+  N++  +ATF SV+ ACS       G     L+ KS    Y    S   D Y   
Sbjct: 720 WRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKC 779

Query: 694 VDMLSRNGYLEDAKHVIEIMPF 715
            D++S     ++ K+  +IMP+
Sbjct: 780 GDVISSFEAFKELKNKQDIMPW 801



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 202/425 (47%), Gaps = 3/425 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D       L     L S  LG QVH   +K      +F+ N  + MYSK G  G   
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAK 481

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  ++ +SW  +     QN E +  + M   M+ +G  P++ +  + +  C ++ 
Sbjct: 482 ALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIR 541

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A+E G  IHC A+K  I  N  VG S+++ Y+K GDV ++ ++F  + +  +   NA+I 
Sbjct: 542 ATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIA 601

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+       EA+ +   +L +G+     TF + L GCS   +  IG+Q+H   ++S V  
Sbjct: 602 GFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLY 661

Query: 280 SISIVN-ALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
             +++  +L  +Y+KS  ++ A K+   M D K++  W  +  G+++N     +   F +
Sbjct: 662 DDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWR 721

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                 R +  TF+ +L+ C  +     G ++  L    GF   E  TS+LI M+ +CG 
Sbjct: 722 MRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGD 781

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           V  +   F  +  K +I  WN ++ G+  N    + L  F  + E  ++ +  TF  V+ 
Sbjct: 782 VISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIKPDEVTFLGVLI 841

Query: 457 TCCRS 461
            C  S
Sbjct: 842 ACTHS 846



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/459 (22%), Positives = 198/459 (43%), Gaps = 48/459 (10%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG I+R        + ++L+++Y KS  + YA+       ++   + ++L    + +
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARS 135

Query: 326 KNPGQTASLFHKFI--LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +PG     F ++I   +G RP+    +++L  C ++  L  G Q+ C  +  GF     
Sbjct: 136 GSPGDVLGAF-RYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVF 194

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             ++L+ M+ +CG V  A  VFD ++  +   W+ +++ Y    C  + L  F  + + G
Sbjct: 195 CEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMG 254

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
              +  T   ++ T   S                                   G+LD++ 
Sbjct: 255 SAPDQVTLVTIISTLASS-----------------------------------GRLDHAT 279

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                       +W A++S     G     + ++  +   G  P      ++L++ A + 
Sbjct: 280 ALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMK 339

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A+   + +H   +  G +  V+V S++I+ YAKCG    A+  FD S   N ++++N ++
Sbjct: 340 AFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKN-IVMWNAML 398

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDS 679
             +  + L  EA+ +F  M    LQ  + TFVS++ AC++      G    C+  K+   
Sbjct: 399 TGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNC-- 456

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
              M  S       +DM S+ G + DAK +  ++P++ S
Sbjct: 457 ---MDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDS 492



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 110/221 (49%), Gaps = 2/221 (0%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R+ + Q    +HG I++ G    G +  SL++ Y   G++  ++     A      +  +
Sbjct: 68  RARHSQTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASS 127

Query: 520 MMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++S     G   + +  F  +   AG +PD++ L  +L++C+ +G     + +H  V+K 
Sbjct: 128 LLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKS 187

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF++ V+  +A++D YAKCGD+  AR  FD      D I ++++I  Y   G   EA+ +
Sbjct: 188 GFSSSVFCEAALVDMYAKCGDVPNARRVFD-GIACPDTICWSSMIACYHRVGCYQEALAL 246

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           F +M      P Q T V+++S  +  G +D    L K M +
Sbjct: 247 FSRMDKMGSAPDQVTLVTIISTLASSGRLDHATALLKKMPT 287


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/704 (29%), Positives = 368/704 (52%), Gaps = 11/704 (1%)

Query: 63  GTQVHGHIVKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+H  I K   + ++ FL   L+ MY KCG      +VFDEM +R   +W  ++ A +
Sbjct: 99  GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NGE    L +Y +M+  G      +  +++K C  +     G  +H   +K+      F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  ++++ YAK  D++AA R+F       D   WN+++  Y+  G   E L +   M   
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDY 299
           G   + YT ++AL  C   +   +G++IH  +++S    S + + NALI MY +   M  
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++  +M + DV++WN+L  G+ +N    +    F   I +G + + V+ + ++   G+
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L +L  G++L    +  G+     V ++LI M+ +C         F  +  K++ +W  +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N C  + L+ F ++ +  +E++      ++      ++  +V +IH  I++ G 
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518

Query: 480 SSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
                I + L+  Y    N G     FE   G    D+ SW +M+S+    G+  EAV +
Sbjct: 519 LDT-VIQNELVDVYGKCRNMGYATRVFESIKGK---DVVSWTSMISSSALNGNESEAVEL 574

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +VE G   D   L  IL++ A++ A  + + IH ++++ GF  E  +A AV+D YA 
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGD++ A+  FD+      ++ Y ++I AY  HG    A+E+FDKM+  N+ P   +F++
Sbjct: 635 CGDLQSAKAVFDR-IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++ ACSH GL+D+G    K M+ +Y ++P P+ Y CLVDML R   + +A   +++M  +
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P+  V+ +LL+ CR H  KE+GE A+++LL L PKN    VL+S
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 797



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 1/326 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + +   ++ S  L + + G ++H +++K G+ +++ + N LI MYSKC    +  R
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F  M +++L+SWT +++   QN      L+++ D+       +E  +GS+++    + +
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
                 IHC  L+  +  +  +   +++ Y K  ++  A RVF SI   DV  W +MI  
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   EA+ +   M+  G++ D    +  L   + ++  + GR+IH  ++R      
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            SI  A++DMY     +  A  VF+R+  K ++ + ++   +  +        LF K   
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
               P+H++F  LL  C     LD G
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEG 707



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 7/268 (2%)

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFE-FSN 507
            F YV+E C +        Q+H  I KT  S    ++   L+  Y   G LD++ + F  
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
             +R   A W  M+ A V  G    A+ ++ ++   G          +L +CA +   + 
Sbjct: 142 MPDRTAFA-WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              +H  ++KLG+++  ++ +A++  YAK  D+  AR  FD      D +++N+++ +Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   E +E+F +M +    P+  T VS ++AC        G  +  S+        S 
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSSTHSS 318

Query: 688 DCYGC--LVDMLSRNGYLEDAKHVIEIM 713
           + Y C  L+ M +R G +  A+ ++  M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQM 346


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/704 (29%), Positives = 368/704 (52%), Gaps = 11/704 (1%)

Query: 63  GTQVHGHIVKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+H  I K   + ++ FL   L+ MY KCG      +VFDEM +R   +W  ++ A +
Sbjct: 99  GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NGE    L +Y +M+  G      +  +++K C  +     G  +H   +K+      F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  ++++ YAK  D++AA R+F       D   WN+++  Y+  G   E L +   M   
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDY 299
           G   + YT ++AL  C   +   +G++IH  +++S    S + + NALI MY +   M  
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++  +M + DV++WN+L  G+ +N    +    F   I +G + + V+ + ++   G+
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L +L  G++L    +  G+     V ++LI M+ +C         F  +  K++ +W  +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N C  + L+ F ++ +  +E++      ++      ++  +V +IH  I++ G 
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518

Query: 480 SSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
                I + L+  Y    N G     FE   G    D+ SW +M+S+    G+  EAV +
Sbjct: 519 LDT-VIQNELVDVYGKCRNMGYATRVFESIKGK---DVVSWTSMISSSALNGNESEAVEL 574

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +VE G   D   L  IL++ A++ A  + + IH ++++ GF  E  +A AV+D YA 
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGD++ A+  FD+      ++ Y ++I AY  HG    A+E+FDKM+  N+ P   +F++
Sbjct: 635 CGDLQSAKAVFDR-IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++ ACSH GL+D+G    K M+ +Y ++P P+ Y CLVDML R   + +A   +++M  +
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P+  V+ +LL+ CR H  KE+GE A+++LL L PKN    VL+S
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 797



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 1/326 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + +   ++ S  L + + G ++H +++K G+ +++ + N LI MYSKC    +  R
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F  M +++L+SWT +++   QN      L+++ D+       +E  +GS+++    + +
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
                 IHC  L+  +  +  +   +++ Y K  ++  A RVF SI   DV  W +MI  
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   EA+ +   M+  G++ D    +  L   + ++  + GR+IH  ++R      
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            SI  A++DMY     +  A  VF+R+  K ++ + ++   +  +        LF K   
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
               P+H++F  LL  C     LD G
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEG 707



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 7/268 (2%)

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFE-FSN 507
            F YV+E C +        Q+H  I KT  S    ++   L+  Y   G LD++ + F  
Sbjct: 82  AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
             +R   A W  M+ A V  G    A+ ++ ++   G          +L +CA +   + 
Sbjct: 142 MPDRTAFA-WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              +H  ++KLG+++  ++ +A++  YAK  D+  AR  FD      D +++N+++ +Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   E +E+F +M +    P+  T VS ++AC        G  +  S+        S 
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSSTHSS 318

Query: 688 DCYGC--LVDMLSRNGYLEDAKHVIEIM 713
           + Y C  L+ M +R G +  A+ ++  M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQM 346


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 203/716 (28%), Positives = 363/716 (50%), Gaps = 7/716 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+ K+ + + NL+    G   HG I + G   D+F+   L+ MYSK G       VFD+M
Sbjct: 134 FVLKACTGALNLQE---GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            +R++V+W  +++   Q+ +    +  +  M+  G  P+  ++ ++      +   E   
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           SIH +    R + +  V   +++ Y+K GDV  A RVF  +   D   W  M+ GYAH G
Sbjct: 251 SIHGYVF--RRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              E L +   M    + ++K + ++A    +   D + G++IHG  ++  ++  I +  
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L+ MY K    + A ++F  +  +D+++W+ +     +   P +  SLF +      +P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N VT   +L  C  L  L LG  + C  +      + +  ++L+ M+ +CG    A + F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +S ++I TWN L++GY       + +  F  +  S +  +  T   VV  C    +  
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSAL 524
               IHG I+K GF S  ++ ++LI  Y   G L ++ F F+      D  +W  +++A 
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           +  GH  EA++ FH +      P+     ++L + A + A++   + H  +I++GF +  
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V +++ID YAKCG +  +   F++  +  D + +N ++  YA HG    A+ +F  M+ 
Sbjct: 669 LVGNSLIDMYAKCGQLDYSEKLFNE-MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           + +Q    +FVSV+SAC H GLV++G  +F SM  +Y ++P  + Y C+VD+L R G  +
Sbjct: 728 SQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +    I++MP +P   V+ +LL  CR+H N +LGE A + L+ L P+N A  V+LS
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLS 843



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/672 (25%), Positives = 322/672 (47%), Gaps = 9/672 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQN--NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q+H  I+  GF +   + +  NL +++ KC        VFD     + + W  ++ A  +
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARSVFDSTPNPSRILWNSMIRAYTR 106

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +++  L+MY  M   G  P+++    V+K C      + G   H    +  +E++ F+
Sbjct: 107 SKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++ Y+K+GD+  A  VF  +   DV  WNAMI G +      EA++   SM   G+
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                + +N   G   +++ ++ R IHG + R +   ++S  N LID+Y K   +D A +
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARR 284

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M D+D +SW T+  G++ N    +   LF K  L   R N V+         + +D
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G ++   AL      +  V + L+ M+ +CG  E A  +F  +  +++  W+ +++ 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                   + L  F  +    ++ N  T   ++  C      ++   IH   +K    S 
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
               ++L+  Y   G    +    N     D+ +W ++++     G  + A+ +F+ L  
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +   PD   +  ++ +CA +    +   IH  ++KLGF ++ +V +A+ID YAKCG +  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F+++  + D + +N +I AY  +G   EA+  F +M+L N  P+  TFVSV+ A +
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           +     +G + F +   Q G   +      L+DM ++ G L+ ++ +   M  + + + +
Sbjct: 645 YLAAFREG-MAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVS-W 702

Query: 723 RSLLSGCRIHGN 734
            ++LSG  +HG+
Sbjct: 703 NAMLSGYAVHGH 714



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 1/319 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + L   L    +L    LG  +H   VK    +D+     L++MY+KCG+F   L
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+ M+ R++V+W  +++   Q G+    + M+  ++ +   P+   +  V+  C  + 
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
             + G  IH   +K+  E +  V  ++++ YAK G + +AE +F     + D   WN +I
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G+  EA++    M  E    +  TF++ L   + +A F  G   H  II+    
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +  + N+LIDMY K   +DY+ K+F  M  KD +SWN +  G++ + +  +  +LF   
Sbjct: 666 SNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725

Query: 339 ILSGSRPNHVTFSILLRQC 357
             S  + + V+F  +L  C
Sbjct: 726 QESQVQIDSVSFVSVLSAC 744


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 213/691 (30%), Positives = 353/691 (51%), Gaps = 6/691 (0%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F ND  L   +I MYS CG       VFD++  +NL  W  IVSA  +N  F+  + ++ 
Sbjct: 30  FCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFS 89

Query: 135 DM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           ++       P+ F +  V+K C  +     G  IH  A K+ +  + FVG +++  Y K 
Sbjct: 90  ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKC 149

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFIN 251
           G V  A +VF  +   ++  WN++I G++  G+  E+ N    ML   E    D  T + 
Sbjct: 150 GLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVT 209

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C+   D + G  +HGL ++  +   + + N+LIDMY K   +  A  +F++   K+
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKN 269

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL--LRQCGKLLDLDLGLQL 369
           ++SWN++ GG++  ++  +T  L  K     ++     F+IL  L  C +  +L    +L
Sbjct: 270 IVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKEL 329

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +   G    E V ++ I  + RCGA+  +  VFD +  K +++WN LL GY  N   
Sbjct: 330 HGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDP 389

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  +  + +SG++ +  T   ++  C R ++     +IHG  ++ G +   +I  SL
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y+  G+   +    +G E   + SW  M++     G   EA+ +F  ++  G +P E
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             +  +  +C+ + A +  K +H F +K     +++V+S++ID YAK G I  ++  FD+
Sbjct: 510 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
                DV  +N +I  Y  HG   EA+E+F+KM    L+P   TF  ++ ACSH GLV+ 
Sbjct: 570 -LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVED 628

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G   F  M + + ++P  + Y C+VDML R G ++DA  +IE MP  P   ++ SLLS C
Sbjct: 629 GLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 688

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHGN  LGE  + KLL L P+    +VL+S
Sbjct: 689 RIHGNLGLGEKVANKLLELEPEKPENYVLIS 719



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/615 (25%), Positives = 286/615 (46%), Gaps = 18/615 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  +HG   K+   +D+F+ N LIAMY KCG     ++VF+ M ERNLVSW  I+    
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFS 178

Query: 122 QNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
           +NG        + +M      F+P+   + +V+ VC      E G ++H  A+K+ + + 
Sbjct: 179 ENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEE 238

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  S+++ Y+K   ++ A+ +F      ++  WN+MIGGYA          ++  M  
Sbjct: 239 LMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQT 298

Query: 240 EGITM--DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           E   M  D++T +N L  C   ++    +++HG   R  ++ +  + NA I  Y +   +
Sbjct: 299 EDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             + +VF+ M  K V SWN L  G+++N +P +   L+ +   SG  P+  T   LL  C
Sbjct: 359 CSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 418

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            ++  L  G ++   AL  G   +  +  SL+ ++  CG    A  +FD + ++++ +WN
Sbjct: 419 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWN 478

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++GY  N    + +  F  +   G++        V   C +    ++  ++H   +K 
Sbjct: 479 VMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKA 538

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
             +   ++ SS+I  Y   G +  S    +     D+ASW  +++     G   EA+ +F
Sbjct: 539 HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELF 598

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFVIKLGFNTEVYVASAV 590
             ++  G KPD++    IL +C+  G        + +  ++H    KL   T       V
Sbjct: 599 EKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYT------CV 652

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQP 649
           +D   + G I  A    ++     D  ++++L+ +   HG +    ++ +K ++L   +P
Sbjct: 653 VDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKP 712

Query: 650 SQATFVSVMSACSHK 664
                +S + A S K
Sbjct: 713 ENYVLISNLFAGSGK 727



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/535 (24%), Positives = 252/535 (47%), Gaps = 25/535 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG  VKLG   ++ + N+LI MYSKC +      +FD+  ++N+VSW  ++    +
Sbjct: 223 GMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAR 282

Query: 123 NGEFDMGLKMYVDMKTNG--FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             +      +   M+T       +EF + +V+ VC+     +    +H ++ +  ++ N 
Sbjct: 283 EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNE 342

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  + +  Y + G + ++ERVF  + +  V  WNA++ GYA      +AL++   M   
Sbjct: 343 LVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDS 402

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D +T  + L  CS +     G +IHG  +R+ +     I  +L+ +YI   G  +A
Sbjct: 403 GLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI-CCGKPFA 461

Query: 301 FKV-FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
            +V F+ M  + ++SWN +  G+S+N  P +  +LF + +  G +P  +    +   C +
Sbjct: 462 AQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQ 521

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L LG +L C AL     ++  V+SS+I M+ + G + ++  +FD +  K++ +WN +
Sbjct: 522 LSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVI 581

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE---------NQQMVGQI 470
           ++GY  +    + L+ F  +   G++ +  TF  ++  C  +          NQ +   +
Sbjct: 582 IAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML--NL 639

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSALVHQGH 529
           H    K    +C      ++      G++D++           D   W +++S+    G+
Sbjct: 640 HNIEPKLEHYTC------VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGN 693

Query: 530 NHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                 + + L+E   EKP+ Y+L  I N  A  G +   + +   +  +G   +
Sbjct: 694 LGLGEKVANKLLELEPEKPENYVL--ISNLFAGSGKWDDVRRVRGRMKDIGLQKD 746



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 166/345 (48%), Gaps = 12/345 (3%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +DS L  D   +   L     +KS   G ++HG  ++ G   D F+  +L+++Y  CG  
Sbjct: 400 TDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKP 459

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                +FD M  R+LVSW ++++   QNG  D  + ++  M ++G  P E A+  V   C
Sbjct: 460 FAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGAC 519

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             + A   G  +HCFALK  + ++ FV  S+++ YAK G +  ++R+F  +   DV  WN
Sbjct: 520 SQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWN 579

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR- 274
            +I GY   G G EAL +   ML  G+  D +TF   L  CS     + G +    ++  
Sbjct: 580 VIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNL 639

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTAS 333
             +E  +     ++DM  ++  +D A ++ E M  D D   W++L      + N G    
Sbjct: 640 HNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEK 699

Query: 334 LFHKFI-LSGSRP-NHVTFSILLRQCGKLLDL--------DLGLQ 368
           + +K + L   +P N+V  S L    GK  D+        D+GLQ
Sbjct: 700 VANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQ 744



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 195/417 (46%), Gaps = 7/417 (1%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA-LIDMYIKSSGMDYAFKVFERMADKD 311
           LQ C    D ++GR++H ++  S   C+  ++N  +I MY        +  VF+++  K+
Sbjct: 5   LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +  WN +   ++ N+      S+F + I ++  +P++ T   +++ C  LLDL LG  + 
Sbjct: 65  LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            +A     + +  V ++LI M+ +CG VE A  VF+++  +N+ +WN ++ G+  N    
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184

Query: 431 DVLKTFCN--IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           +    F    + E     +  T   V+  C   E+ +    +HG  +K G +    + +S
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNS 244

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV--EAGEK 546
           LI  Y     L  +    +  ++ ++ SW +M+     +        +   +   +A  K
Sbjct: 245 LIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMK 304

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            DE+ +  +L  C      Q  K +H +  + G  +   VA+A I AY +CG +  +   
Sbjct: 305 ADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERV 364

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           FD   ++  V  +N L+  YA +    +A++++ +M  + L P   T  S++ ACS 
Sbjct: 365 FDL-MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 184/384 (47%), Gaps = 11/384 (2%)

Query: 352 ILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           +LL+ CG+  D+++G +L + ++    F ++  + + +I M+  CG+   +  VFD +  
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           KN+  WN ++S Y  N    D +  F   I  +  + +  T   V++ C    +  +   
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQG 528
           IHG   K    S  ++ ++LI  Y   G ++ + + F +  ER ++ SW +++      G
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER-NLVSWNSIICGFSENG 181

Query: 529 HNHEAVTIFHSLVEAGEK--PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
              E+   F  ++   E   PD   L T+L  CA     ++  ++H   +KLG N E+ V
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-- 644
            +++ID Y+KC  +  A++ FD++   N ++ +N++I  YA    V     +  KM+   
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKN-IVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           A ++  + T ++V+  C  +  + +          ++G+Q +       +   +R G L 
Sbjct: 301 AKMKADEFTILNVLPVCLERSEL-QSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALC 359

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSG 728
            ++ V ++M  + + + + +LL G
Sbjct: 360 SSERVFDLMDTK-TVSSWNALLCG 382


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 209/715 (29%), Positives = 365/715 (51%), Gaps = 7/715 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +++ L+     ++ + G  +H  ++K G       +N+LI+ YSKC       R FDE+ 
Sbjct: 7   ISQQLTRYAAAQALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEIP 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +   VSW+ +V+A   NG     ++ +  M+  G   NEFA+  V+K CV    +  G  
Sbjct: 65  DPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DARLGAQ 121

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCG 225
           +H  A+      + FV  +++  Y   G +  A RVF    S+ +   WN ++  Y    
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +A+ V   M++ GI   ++ F   +  C+   + + GRQ+H +++R   +  +   N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY+K   +D A  +FE+M D DV+SWN L  G   N +  +   L  +   SG  P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T S +L+ C      DLG Q+    +      ++ +   L+ M+ +   ++ A  VF
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D + ++++   N L+SG        + L  F  + + G+ VN  T   V+++    E   
Sbjct: 362 DWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAAS 421

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              Q+H   +K GF    ++ + LI SY     L ++          D+ +  +M++AL 
Sbjct: 422 TTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALS 481

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
              H   A+ +F  ++  G +PD ++L ++LN+CA++ AY++ K +H  +IK  F ++ +
Sbjct: 482 QCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAF 541

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             +A++  YAKCG I+ A +AF  S     V+ ++ +I   A HG    A+E+F +M   
Sbjct: 542 AGNALVYTYAKCGSIEDAELAF-SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDE 600

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P+  T  SV+ AC+H GLVD+    F SM   +G+  + + Y C++D+L R G L+D
Sbjct: 601 GINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDD 660

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A  ++  MPFQ + +++ +LL   R+H + ELG+ A+EKL +L P+    HVLL+
Sbjct: 661 AMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLA 715



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/516 (24%), Positives = 242/516 (46%), Gaps = 5/516 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH  +V++G+  D+F  N L+ MY K G       +F++M + ++VSW  ++S  + 
Sbjct: 221 GRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 280

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     +++ + MK +G +PN F + S++K C   GA + G  IH F +K   + + ++
Sbjct: 281 NGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYI 340

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++ YAK   +  A +VF  +   D+   NA+I G +H G   EAL++   +  EG+
Sbjct: 341 GVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGL 400

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +++ T    L+  + +      RQ+H L ++        +VN LID Y K S +  A +
Sbjct: 401 GVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANR 460

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE  +  D+I+  ++    S+  +      LF + +  G  P+    S LL  C  L  
Sbjct: 461 VFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 520

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G Q+    +   F+ +    ++L+Y + +CG++E A   F ++  + + +W+ ++ G
Sbjct: 521 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 580

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSS 481
              +      L+ F  + + G+  N  T   V+  C  +       +   ++ +  G   
Sbjct: 581 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 640

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIFHS 539
                S +I      G+LD++ E  N    + + + WGA++ A  VH+      +     
Sbjct: 641 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKL 700

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
            +   EK   ++L  + N+ A+ G +     +   +
Sbjct: 701 FILEPEKSGTHVL--LANTYASAGMWNEVAKVRKLM 734



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F +D F  N L+  Y+KCG      
Sbjct: 501 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 560

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C   G
Sbjct: 561 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 620


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 203/716 (28%), Positives = 363/716 (50%), Gaps = 7/716 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+ K+ + + NL+    G   HG I + G   D+F+   L+ MYSK G       VFD+M
Sbjct: 134 FVLKACTGALNLQE---GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKM 190

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            +R++V+W  +++   Q+ +    +  +  M+  G  P+  ++ ++      +   E   
Sbjct: 191 PKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCR 250

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           SIH +    R + +  V   +++ Y+K GDV  A RVF  +   D   W  M+ GYAH G
Sbjct: 251 SIHGYVF--RRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNG 308

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              E L +   M    + ++K + ++A    +   D + G++IHG  ++  ++  I +  
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L+ MY K    + A ++F  +  +D+++W+ +     +   P +  SLF +      +P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N VT   +L  C  L  L LG  + C  +      + +  ++L+ M+ +CG    A + F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +S ++I TWN L++GY       + +  F  +  S +  +  T   VV  C    +  
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSAL 524
               IHG I+K GF S  ++ ++LI  Y   G L ++ F F+      D  +W  +++A 
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           +  GH  EA++ FH +      P+     ++L + A + A++   + H  +I++GF +  
Sbjct: 609 MQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNT 668

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V +++ID YAKCG +  +   F++  +  D + +N ++  YA HG    A+ +F  M+ 
Sbjct: 669 LVGNSLIDMYAKCGQLXYSEKLFNE-MDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE 727

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           + +Q    +FVSV+SAC H GLV++G  +F SM  +Y ++P  + Y C+VD+L R G  +
Sbjct: 728 SQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFD 787

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +    I++MP +P   V+ +LL  CR+H N +LGE A + L+ L P+N A  V+LS
Sbjct: 788 ETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLS 843



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/672 (25%), Positives = 321/672 (47%), Gaps = 9/672 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQN--NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q+H  I+  GF +   + +  NL +++ KC        VFD     + + W  ++ A  +
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDL---ARSVFDSTPNPSRILWNSMIRAYTR 106

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +++  L+MY  M   G  P+++    V+K C      + G   H    +  +E++ F+
Sbjct: 107 SKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFI 166

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++ Y+K+GD+  A  VF  +   DV  WNAMI G +      EA++   SM   G+
Sbjct: 167 GAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGV 226

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                + +N   G   +++ ++ R IHG + R +   ++S  N LID+Y K   +D A +
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARR 284

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M D+D +SW T+  G++ N    +   LF K  L   R N V+         + +D
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETID 344

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G ++   AL      +  V + L+ M+ +CG  E A  +F  +  +++  W+ +++ 
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                   + L  F  +    ++ N  T   ++  C      ++   IH   +K    S 
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
               ++L+  Y   G    +    N     D+ +W ++++     G  + A+ +F+ L  
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +   PD   +  ++ +CA +    +   IH  ++KLGF ++ +V +A+ID YAKCG +  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F+++  + D + +N +I AY  +G   EA+  F +M+L N  P+  TFVSV+ A +
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           +     +G + F +   Q G   +      L+DM ++ G L  ++ +   M  + + + +
Sbjct: 645 YLAAFREG-MAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVS-W 702

Query: 723 RSLLSGCRIHGN 734
            ++LSG  +HG+
Sbjct: 703 NAMLSGYAVHGH 714



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 154/319 (48%), Gaps = 1/319 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + L   L    +L    LG  +H   VK    +D+     L++MY+KCG+F   L
Sbjct: 426 MKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAAL 485

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+ M+ R++V+W  +++   Q G+    + M+  ++ +   P+   +  V+  C  + 
Sbjct: 486 TTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
             + G  IH   +K+  E +  V  ++++ YAK G + +AE +F     + D   WN +I
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVII 605

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G+  EA++    M  E    +  TF++ L   + +A F  G   H  II+    
Sbjct: 606 AAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL 665

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +  + N+LIDMY K   + Y+ K+F  M  KD +SWN +  G++ + +  +  +LF   
Sbjct: 666 SNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725

Query: 339 ILSGSRPNHVTFSILLRQC 357
             S  + + V+F  +L  C
Sbjct: 726 QESQVQIDSVSFVSVLSAC 744


>gi|449528837|ref|XP_004171409.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 413

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 185/430 (43%), Positives = 260/430 (60%), Gaps = 41/430 (9%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC + KI +E+N FVG S L+ YA+LGD+ +AE VF  +   DVGCWNAMIGGY HCG 
Sbjct: 7   VHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTHCGL 66

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G EALN VS +  EGI MD +T ++A++ CSL+ D D G+++HG I+R  +  S + +N 
Sbjct: 67  GLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGL-ISTAAMNG 125

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY+ S   +   K+F  M  +D+ISWNT+FGG S  K                    
Sbjct: 126 LMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGGSSNEKEL------------------ 167

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
                                   CLA+H G LDE  V SS+I MF + G +EM HSVFD
Sbjct: 168 ----------------------WTCLAIHLGCLDETRVLSSIISMFSQFGLMEMVHSVFD 205

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           ++ +K ++ WN+ +  Y  N  + +  +TF ++   GV  N  TF  ++ET C+ EN  M
Sbjct: 206 SLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWM 265

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             Q+H A +K GF S  Y+  SLIK Y+  G L++SFE  N  E +DMA++GA++S LVH
Sbjct: 266 CRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVH 325

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
           Q + +EA+   + L+E+G+KPDE+  G+ILN C+   AY +TK+IH  V K+GF   V+V
Sbjct: 326 QNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCSCRAAYHQTKAIHSLVEKMGFGFHVHV 385

Query: 587 ASAVIDAYAK 596
           ASA+IDAYAK
Sbjct: 386 ASAIIDAYAK 395



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 87/429 (20%), Positives = 175/429 (40%), Gaps = 43/429 (10%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH    K+G   ++F+  + ++MY++ G       VF+ M + ++  W  ++      G 
Sbjct: 7   VHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTHCGL 66

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L     + + G   + F + S +K C  +   + G  +H F L+  +     +   
Sbjct: 67  GLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGLISTAAMN-G 125

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y       +  ++F S+ + D+  WN + GG ++                     +
Sbjct: 126 LMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGGSSN-------------------EKE 166

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            +T +    GC      D  R                +++++I M+ +   M+    VF+
Sbjct: 167 LWTCLAIHLGC-----LDETR----------------VLSSIISMFSQFGLMEMVHSVFD 205

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +  K V +WN     +S N    +    F   +  G   N  TFSI++    K  +  +
Sbjct: 206 SLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWM 265

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
             QL C +L  GF   + V+ SLI  +   G++E +  +F+ +   ++ T+  ++S    
Sbjct: 266 CRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVH 325

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQMVGQIHGAIIKTGFSSCGY 484
                + +     + ESG + +  TF  ++  C CR+   Q    IH  + K GF    +
Sbjct: 326 QNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCSCRAAYHQ-TKAIHSLVEKMGFGFHVH 384

Query: 485 ICSSLIKSY 493
           + S++I +Y
Sbjct: 385 VASAIIDAY 393



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 107/224 (47%), Gaps = 2/224 (0%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM-G 129
           + LG  ++  + +++I+M+S+ G       VFD +  + + +W   + A   N  F+M  
Sbjct: 173 IHLGCLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSSN-SFEMEA 231

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
            + +  +   G + NE+    +++             +HC +LK     + +V CS++  
Sbjct: 232 FRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAGFGSHKYVSCSLIKC 291

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y  +G + ++  +F  +   D+  + A+I    H  Y +EA+  ++ ++  G   D++TF
Sbjct: 292 YILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQNYMYEAIMFLNFLMESGKKPDEFTF 351

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
            + L GCS  A +   + IH L+ +      + + +A+ID Y K
Sbjct: 352 GSILNGCSCRAAYHQTKAIHSLVEKMGFGFHVHVASAIIDAYAK 395



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/400 (19%), Positives = 155/400 (38%), Gaps = 42/400 (10%)

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           D+ R +H L  +  +E ++ +  + + MY +   +  A  VFE M   DV  WN + GG+
Sbjct: 2   DLVRGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGY 61

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           +      +  +        G + ++ T    ++ C  + DLD G +L    L  G +   
Sbjct: 62  THCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGLISTA 121

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            + + L+ M+           +F+++  ++I +WN +  G                   +
Sbjct: 122 AM-NGLMDMYLISDRKNSVLKIFNSMQTRDIISWNTVFGGS-----------------SN 163

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
             E+  C     +   C  E +                    + SS+I  +  FG ++  
Sbjct: 164 EKELWTCL---AIHLGCLDETR--------------------VLSSIISMFSQFGLMEMV 200

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
               +      +++W   + A        EA   F SL+  G   +EY    I+ +    
Sbjct: 201 HSVFDSLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETACKF 260

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                 + +H   +K GF +  YV+ ++I  Y   G ++ +   F+Q     D+  Y  +
Sbjct: 261 ENPWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQ-LEIVDMATYGAV 319

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           I    H   + EA+   + +  +  +P + TF S+++ CS
Sbjct: 320 ISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGCS 359



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 127/310 (40%), Gaps = 46/310 (14%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           K+ SL ++L S   G ++HG I++ G  +   + N L+ MY         L++F+ M  R
Sbjct: 94  KACSLIQDLDS---GKELHGFILRRGLISTAAM-NGLMDMYLISDRKNSVLKIFNSMQTR 149

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           +++SW  +   +    E                                           
Sbjct: 150 DIISWNTVFGGSSNEKEL----------------------------------------WT 169

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           C A+ +       V  S+++ +++ G +     VF S+    V  WN  I  Y+   +  
Sbjct: 170 CLAIHLGCLDETRVLSSIISMFSQFGLMEMVHSVFDSLVFKPVSAWNQFILAYSSNSFEM 229

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EA    SS+L  G+  ++YTF   ++      +  + RQ+H   +++       +  +LI
Sbjct: 230 EAFRTFSSLLRYGVVANEYTFSIIIETACKFENPWMCRQLHCASLKAGFGSHKYVSCSLI 289

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNH 347
             YI    ++ +F++F ++   D+ ++  +      ++N    A +F  F++ SG +P+ 
Sbjct: 290 KCYILIGSLESSFEIFNQLEIVDMATYGAVISTLV-HQNYMYEAIMFLNFLMESGKKPDE 348

Query: 348 VTFSILLRQC 357
            TF  +L  C
Sbjct: 349 FTFGSILNGC 358



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 80/400 (20%), Positives = 153/400 (38%), Gaps = 75/400 (18%)

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           +DL   + CL+   G      V  S + M+ R G +  A  VF+ +   ++  WN ++ G
Sbjct: 1   MDLVRGVHCLSWKIGMEQNVFVGGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGG 60

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       + L     +   G++++  T    V+ C   ++     ++HG I++ G  S 
Sbjct: 61  YTHCGLGLEALNAVSLLNSEGIKMDNFTIVSAVKACSLIQDLDSGKELHGFILRRGLIST 120

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + + L+  Y+   + ++  +  N  +  D+ SW                 T+F     
Sbjct: 121 AAM-NGLMDMYLISDRKNSVLKIFNSMQTRDIISWN----------------TVF----- 158

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G   +E  L T L                   I LG   E  V S++I  +++ G ++ 
Sbjct: 159 -GGSSNEKELWTCL------------------AIHLGCLDETRVLSSIISMFSQFGLMEM 199

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF-VSVMSAC 661
               FD S     V  +N  I+AY+ +    EA   F  +    +  ++ TF + + +AC
Sbjct: 200 VHSVFD-SLVFKPVSAWNQFILAYSSNSFEMEAFRTFSSLLRYGVVANEYTFSIIIETAC 258

Query: 662 ---------------------SHKGL---VDKGCLLFKSMDSQYGMQPSPD-----CYGC 692
                                SHK +   + K  +L  S++S + +    +      YG 
Sbjct: 259 KFENPWMCRQLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGA 318

Query: 693 LVDMLSRNGYLEDAKHVIEIM---PFQPSPTVYRSLLSGC 729
           ++  L    Y+ +A   +  +     +P    + S+L+GC
Sbjct: 319 VISTLVHQNYMYEAIMFLNFLMESGKKPDEFTFGSILNGC 358



 Score = 39.7 bits (91), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 28/144 (19%), Positives = 61/144 (42%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H   +K GF +  ++  +LI  Y   G       +F+++   ++ ++  ++S  +   
Sbjct: 268 QLHCASLKAGFGSHKYVSCSLIKCYILIGSLESSFEIFNQLEIVDMATYGAVISTLVHQN 327

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                +     +  +G  P+EF  GS++  C    A     +IH    K+    +  V  
Sbjct: 328 YMYEAIMFLNFLMESGKKPDEFTFGSILNGCSCRAAYHQTKAIHSLVEKMGFGFHVHVAS 387

Query: 185 SVLNFYAKLGDVAAAERVFYSISS 208
           ++++ YAK+       R   ++ S
Sbjct: 388 AIIDAYAKMWRYRKCTRSIRTVMS 411


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 206/698 (29%), Positives = 364/698 (52%), Gaps = 31/698 (4%)

Query: 66   VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            VHG+ +K+G   D+F+   L+ +YSKCG       +FD M ER++V W +++   +Q G 
Sbjct: 749  VHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGL 808

Query: 126  FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
                 +++ +   +G  P+EF+V  ++      G SE  +           ++  ++   
Sbjct: 809  EKEAFQLFSEFHRSGLRPDEFSVQLILN-----GVSEVNW-----------DEGKWLADQ 852

Query: 186  VLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            V  + AKL           S+S D  DV CWN  +      G  + A+    +M    I 
Sbjct: 853  VQAYAAKL-----------SLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNID 901

Query: 244  MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
             D  T +  L   +   D ++G+Q+HG+ ++S ++  +S+ N+L++MY K     +A +V
Sbjct: 902  YDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREV 961

Query: 304  FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD- 362
            F  M   D+ISWN++    +++    ++ +LF   +  G +P+H T + +LR C  L+D 
Sbjct: 962  FNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG 1021

Query: 363  LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            L++  Q+   AL  G + +  V ++LI ++ + G +E A  +F N    ++  WN ++ G
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081

Query: 423  YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
            Y         L+ F  I +SG + +  T     + C          QIH   IK GF S 
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141

Query: 483  GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             ++ S ++  Y+  G + N+    N     D  +W +M+S  V  G+  +A+ I+H + +
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201

Query: 543  AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            +   PDEY   T++ + + + A ++ + +H  VIKL   ++ +V ++++D YAKCG+I+ 
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261

Query: 603  ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
            A   F +  N  ++ ++N +++  A HG   EA+ +F  MK   ++P + +F+ ++SACS
Sbjct: 1262 AYRLF-KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 1320

Query: 663  HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
            H GL  +      SM + YG++P  + Y CLVD L R G +++A  VIE MPF+ S ++ 
Sbjct: 1321 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 1380

Query: 723  RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            R+LL  CRI G+ E G+  + +L  L P + AA+VLLS
Sbjct: 1381 RALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLS 1418



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 328/686 (47%), Gaps = 42/686 (6%)

Query: 61   VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
            +LG   H  IV  G   D FL NNL+ MYSKCG      +VFD   ER+LV+W  I+ A 
Sbjct: 638  LLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAY 697

Query: 121  I-----QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
                   +G    GL ++  ++ +        +  V+K+C++ G       +H +A+KI 
Sbjct: 698  AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 757

Query: 176  IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            +E + FV  +++N Y+K G +  A  +F  +   DV  WN M+ GY   G   EA  + S
Sbjct: 758  LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 817

Query: 236  SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                 G+  D+++    L G S V ++D G+                        ++   
Sbjct: 818  EFHRSGLRPDEFSVQLILNGVSEV-NWDEGK------------------------WLADQ 852

Query: 296  GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNH--VTFSI 352
               YA K+     + DV  WN      SE    G        F+ ++G   ++  VT  +
Sbjct: 853  VQAYAAKLSLSDDNPDVFCWNK---KLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLV 909

Query: 353  LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            +L       DL+LG Q+  +A+  G   + +V +SL+ M+ + G    A  VF+++ + +
Sbjct: 910  VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969

Query: 413  ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR-SENQQMVGQIH 471
            + +WN ++S    +  + + +  F ++   G++ +  T   V+  C    +   +  QIH
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIH 1029

Query: 472  GAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHN 530
               +KTG  +  ++ ++LI  Y   G+++ + F F N  + LD+A W AMM   +     
Sbjct: 1030 VHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQN-KDDLDLACWNAMMFGYIIGNDG 1088

Query: 531  HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             +A+ +F  + ++GEK D+  L T   +C  +    + K IH   IK GF+++++V S +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148

Query: 591  IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
            +D Y KCGD+  A + F+   ++ D + + ++I     +G   +A+ I+ +M+ + + P 
Sbjct: 1149 LDMYIKCGDMVNAGIVFNY-ISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 1207

Query: 651  QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
            + TF +++ A S    +++G  L  ++  +      P     LVDM ++ G +EDA  + 
Sbjct: 1208 EYTFATLIKASSCVTALEQGRQLHANV-IKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 1266

Query: 711  EIMPFQPSPTVYRSLLSGCRIHGNKE 736
            + M  + +  ++ ++L G   HGN E
Sbjct: 1267 KKMNVR-NIALWNAMLVGLAQHGNAE 1291



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 207/403 (51%), Gaps = 5/403 (1%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSK--CGYFGWGLRVFDEMAERNLVSWTLIVSA 119
            LG QVHG  VK G  +D+ + N+L+ MYSK  C YF     VF++M   +L+SW  ++S+
Sbjct: 922  LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA--REVFNDMKHLDLISWNSMISS 979

Query: 120  AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEK 178
              Q+   +  + +++D+   G  P+ F + SV++ C S+         IH  ALK     
Sbjct: 980  CAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIA 1039

Query: 179  NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
            + FV  ++++ Y+K G +  AE +F +    D+ CWNAM+ GY     G +AL + S + 
Sbjct: 1040 DSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIH 1099

Query: 239  FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              G   D+ T   A + C  +   D G+QIH   I++  +  + + + ++DMYIK   M 
Sbjct: 1100 KSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMV 1159

Query: 299  YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
             A  VF  ++  D ++W ++  G  +N N  Q   ++H+   S   P+  TF+ L++   
Sbjct: 1160 NAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASS 1219

Query: 359  KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
             +  L+ G QL    +    + +  V +SL+ M+ +CG +E A+ +F  ++ +NI  WN 
Sbjct: 1220 CVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNA 1279

Query: 419  LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            +L G   +    + +  F ++   G+E +  +F  ++  C  +
Sbjct: 1280 MLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 1322



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 150/382 (39%), Gaps = 54/382 (14%)

Query: 353  LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            LLR      +L LG       +  G   +  ++++L+ M+ +CG++  A  VFD    ++
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 413  ITTWNELLSGYCFNCCDAD-----VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
            + TWN +L  Y  +    D      L  F  +  S       T   V++ C  S      
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 468  GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
              +HG  IK G     ++  +L+  Y   G++ ++    +     D+  W  M+   V  
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 528  GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG------------AYQRTKS----- 570
            G   EA  +F     +G +PDE+ +  ILN  + +             AY    S     
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDN 866

Query: 571  ----------------------IHPFVIKLGFNTEVYVAS--AVIDAYAKCGDIKGARMA 606
                                  I  FV   G N +    +   V+ A A   D++  +  
Sbjct: 867  PDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQV 926

Query: 607  FDQSFNS---NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
               +  S   +DV V N+L+  Y+  G    A E+F+ MK  +L     ++ S++S+C+ 
Sbjct: 927  HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL----ISWNSMISSCAQ 982

Query: 664  KGLVDKGCLLFKSMDSQYGMQP 685
              L ++   LF  +  + G++P
Sbjct: 983  SSLEEESVNLFIDLLHE-GLKP 1003


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 198/663 (29%), Positives = 355/663 (53%), Gaps = 7/663 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FDE  ++ L     ++    +N +    L +++ ++ +G   +  ++  V+KVC  + 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +HC  +K    ++  VG S+++ Y K   V   ERVF  +   +V  W +++ 
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G   +AL + S M  EGI  + +TF   L G +     + G Q+H ++I+S ++ 
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +I + N++++MY KS  +  A  VF+ M +++ +SWN++  GF  N    +   LF++  
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G +     F+ +++ C  + ++    QL C  +  G   + N+ ++L+  + +C  ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  +F  +   +N+ +W  ++SGY  N      +  FC +   GV  N  T+     T 
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTY----STI 402

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
             +       QIH  ++KT + +   + ++L  SY   G  + + +     +  D+ +W 
Sbjct: 403 LTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWS 462

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA-IGAYQRTKSIHPFVIK 577
           AM+S     G    AV IF  L + G +P+E+   ++LN+CAA   + ++ K  H   IK
Sbjct: 463 AMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 522

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            GF+  + V+SA++  YAK G+I+ A   F +  +  D++ +N++I  YA HG   ++++
Sbjct: 523 SGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD-RDLVSWNSMISGYAQHGCGKKSLK 581

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           IF++M+  NL+    TF+ V+SAC+H GLV++G   F  M   Y + P+ + Y C+VD+ 
Sbjct: 582 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLY 641

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           SR G LE A  +I  MPF    T++R+LL+ CR+H N +LGE A+EKL+ L P++ AA+V
Sbjct: 642 SRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYV 701

Query: 758 LLS 760
           LLS
Sbjct: 702 LLS 704



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/606 (27%), Positives = 293/606 (48%), Gaps = 15/606 (2%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R++G QVH   +K GF  D+ +  +L+ MY K      G RVFDEM  +N+VSWT +++ 
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             QNG  +  LK++  M+  G  PN F   +V+    + GA E G  +H   +K  ++  
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FVG S++N Y+K   V+ A+ VF S+ + +   WN+MI G+   G   EA  +   M  
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+ + +  F   ++ C+ + +    +Q+H  +I++  +  ++I  AL+  Y K S +D 
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347

Query: 300 AFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
           AFK+F  M   ++V+SW  +  G+ +N    +  +LF +    G RPNH T+S +L    
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANA 407

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +       Q+  L +   + +  +V ++L   + + G    A  +F+ +  K+I  W+ 
Sbjct: 408 AVSP----SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSA 463

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKT 477
           +LSGY         +K F  + + GVE N  TF  V+  C         G Q H   IK+
Sbjct: 464 MLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKS 523

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           GFS+   + S+L+  Y   G ++++ E F    +R D+ SW +M+S     G   +++ I
Sbjct: 524 GFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR-DLVSWNSMISGYAQHGCGKKSLKI 582

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDA 593
           F  +     + D      ++++C   G     +     ++K   +    E Y  S ++D 
Sbjct: 583 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHY--SCMVDL 640

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y++ G ++ A    ++        ++ TL+ A   H  ++  +      KL +LQP  + 
Sbjct: 641 YSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH--LNVQLGELAAEKLISLQPQDSA 698

Query: 654 FVSVMS 659
              ++S
Sbjct: 699 AYVLLS 704



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 187/381 (49%), Gaps = 8/381 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
             A  + L  N+K      Q+H  ++K G   D+ ++  L+  YSKC       ++F  M
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355

Query: 106 -AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
              +N+VSWT I+S  +QNG  D  + ++  M+  G  PN F   +++    ++  S+  
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ-- 413

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   +K   E +P VG ++ + Y+K+GD   A ++F  I   D+  W+AM+ GYA  
Sbjct: 414 --IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQM 471

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-VADFDIGRQIHGLIIRSEVECSISI 283
           G    A+ +   +  EG+  +++TF + L  C+   A  + G+Q H   I+S    ++ +
Sbjct: 472 GDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCV 531

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            +AL+ MY K   ++ A +VF+R  D+D++SWN++  G++++    ++  +F +      
Sbjct: 532 SSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL 591

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             + +TF  ++  C     ++ G +    +      +      S ++ ++ R G +E A 
Sbjct: 592 ELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAM 651

Query: 403 SVFDNVSYK-NITTWNELLSG 422
            + + + +    T W  LL+ 
Sbjct: 652 DLINKMPFPAGATIWRTLLAA 672


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 209/734 (28%), Positives = 379/734 (51%), Gaps = 32/734 (4%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC------------------------- 92
           K+   G Q H  ++   F   +F+ N LI MY KC                         
Sbjct: 56  KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAML 115

Query: 93  -GYFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
            GY G G      ++FD M ER++VSW  ++S  + NG+    + +++ M   G + +  
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT 175

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
               V+K C S+     G  IH  A+K+  + +   G ++L+ YAK   +  + + F+S+
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +   W+A+I G          L +   M   G+ + + TF +  + C+ ++   +G 
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+HG  ++++    + I  A +DMY+K + +  A K+F  + + ++ S+N +  G++ + 
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   +F     SG   + V+ S   R C  +     GLQ+  L++         V +
Sbjct: 356 KGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 415

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +++ M+ +CGA+  A  VF+ +  ++  +WN +++ +  N  +   L  F  + +SG+E 
Sbjct: 416 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEP 475

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T+  V++ C   +      +IH  IIK+      ++  +LI  Y   G ++ + +  
Sbjct: 476 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLH 535

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +      + SW A++S    Q  + EA   F  ++E G  PD +   TIL++CA +   +
Sbjct: 536 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 595

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K IH  +IK    ++ Y++S ++D Y+KCG+++  ++ F+++ N  D + +N ++  Y
Sbjct: 596 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN-RDFVTWNAMVCGY 654

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A HGL  EA++IF+ M+L N++P+ ATF++V+ AC H GLV+KG   F SM S YG+ P 
Sbjct: 655 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 714

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            + Y C+VD++ R+G +  A  +IE MPF+    ++R+LLS C+IHGN E+ E A+  +L
Sbjct: 715 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSIL 774

Query: 747 LLLPKNDAAHVLLS 760
            L P++ AA+VLLS
Sbjct: 775 QLEPEDSAAYVLLS 788



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 170/631 (26%), Positives = 307/631 (48%), Gaps = 9/631 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG  VK+GF  D+   + L+ MY+KC      ++ F  M E+N VSW+ I++  +Q
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N +   GL+++ +M+  G   ++    SV + C  + A   G  +H  ALK     +  +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G + L+ Y K  +++ A+++F S+ + ++  +NA+I GYA    G EAL +   +   G+
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D+ +   A + C+++     G Q+HGL ++S  + +I + NA++DMY K   +  A  
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 432

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE M  +D +SWN +     +N N  +T SLF   + SG  P+  T+  +L+ C     
Sbjct: 433 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQA 492

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G+++    +      +  V  +LI M+ +CG +E A  + D ++ + + +WN ++SG
Sbjct: 493 LNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 552

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +       +  KTF  + E GV+ +  T+  +++TC      ++  QIH  IIK    S 
Sbjct: 553 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 612

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            YI S+L+  Y   G + +       A   D  +W AM+      G   EA+ IF  +  
Sbjct: 613 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 672

Query: 543 AGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
              KP+      +L +C  +G  ++     H  +   G + ++   S V+D   + G + 
Sbjct: 673 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 732

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ---PSQATFVSVM 658
            A    +      D +++ TL+     HG V    E+ +K   + LQ      A +V + 
Sbjct: 733 KALELIEGMPFEADAVIWRTLLSICKIHGNV----EVAEKAAYSILQLEPEDSAAYVLLS 788

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +  ++ G+ ++   L K M    G++  P C
Sbjct: 789 NIYANAGMWNEVTKLRKMMRFN-GLKKEPGC 818



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 194/381 (50%), Gaps = 2/381 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+ +      +K  + G QVHG  +K    ++I + N ++ MY KCG       VF
Sbjct: 375 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 434

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +EM  R+ VSW  I++A  QNG  +  L ++V M  +G  P+EF  GSV+K C    A  
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALN 494

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K R+  + FVG ++++ Y+K G +  AE++   ++   V  WNA+I G++
Sbjct: 495 CGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFS 554

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EA    S ML  G+  D +T+   L  C+ +   ++G+QIH  II+ E++    
Sbjct: 555 LQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAY 614

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           I + L+DMY K   M     +FE+  ++D ++WN +  G++++    +   +F    L  
Sbjct: 615 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 674

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            +PNH TF  +LR CG +  ++ GL     +  + G   +    S ++ +  R G V  A
Sbjct: 675 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 734

Query: 402 HSVFDNVSYK-NITTWNELLS 421
             + + + ++ +   W  LLS
Sbjct: 735 LELIEGMPFEADAVIWRTLLS 755



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/551 (24%), Positives = 258/551 (46%), Gaps = 36/551 (6%)

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           F+ L +     ++     K TF +  Q CS       G+Q H  +I +E + ++ + N L
Sbjct: 24  FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCL 83

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF------------ 335
           I MYIK S +++AFKVF+ M  +D +SWN +  G++   + G    LF            
Sbjct: 84  IQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWN 143

Query: 336 -----------HKFILS--------GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
                      H+ ++         G+  +  TF+++L+ C  L D   G+Q+  LA+  
Sbjct: 144 SLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM 203

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +    S+L+ M+ +C  ++ +   F ++  KN  +W+ +++G   N      L+ F
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             + ++GV V+  TF  V  +C      ++  Q+HG  +KT F +   I ++ +  Y+  
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
             L ++ +  N     ++ S+ A++          EA+ +F  L ++G   DE  L    
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAF 383

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +CA I        +H   +K    + + VA+A++D Y KCG +  A + F++   S D 
Sbjct: 384 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV-SRDA 442

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF-K 675
           + +N +I A+  +G   + + +F  M  + ++P + T+ SV+ AC+    ++ G  +  +
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
            + S+ G+         L+DM S+ G +E A+ + + +  Q +   + +++SG  +    
Sbjct: 503 IIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQ-TVVSWNAIISGFSLQKQS 559

Query: 736 ELGEWASEKLL 746
           E  +    K+L
Sbjct: 560 EEAQKTFSKML 570



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 36/445 (8%)

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           ++K+P +T  +        +     TFS + ++C     L  G Q     +   F     
Sbjct: 19  QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL----------------------- 420
           VT+ LI M+ +C  +E A  VFD +  ++  +WN +L                       
Sbjct: 79  VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138

Query: 421 --------SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
                   SGY  N     V+  F  +   G   +  TF  V+++C   E+     QIHG
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             +K GF       S+L+  Y    +LD S +F +     +  SW A+++  V       
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            + +F  + +AG    +    ++  SCA + A +    +H   +K  F T+V + +A +D
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLD 318

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KC ++  A+  F+ S  ++++  YN +I+ YA      EA+ +F  ++ + L   + 
Sbjct: 319 MYMKCNNLSDAQKLFN-SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 377

Query: 653 TFVSVMSACSH-KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           +      AC+  KG  D   L    +  +   Q +      ++DM  + G L +A  V E
Sbjct: 378 SLSGAFRACAVIKG--DLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 435

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKE 736
            M  + + + + ++++    +GN+E
Sbjct: 436 EMVSRDAVS-WNAIIAAHEQNGNEE 459


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 211/726 (29%), Positives = 369/726 (50%), Gaps = 17/726 (2%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           + P  ++  L+     +S  LG  +H H++K G  +    +N+L++ YSKC   G   RV
Sbjct: 2   RSPESISPLLTRYAATQSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRV 59

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FDE  +   VSW+ +V+A   N      L  +  M+  G   NEFA+  V+K     G  
Sbjct: 60  FDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG-- 117

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGG 220
             G  +H  A+   +  + FV  +++  Y   G V  A RVF   + D +   WN M+  
Sbjct: 118 -LGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +       +A+ +   M++ G+  +++ F   +  C+   D + GR++H +++R+  +  
Sbjct: 177 FVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD 236

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +   NAL+DMY K   +  A  VF ++   DV+SWN    G   + +      L  +   
Sbjct: 237 VFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKS 296

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL------DEENVTSSLIYMFCR 394
           SG  PN  T S +L+ C         L  Q   +H GF+       ++ +  +L+ M+ +
Sbjct: 297 SGLVPNVFTLSSILKACAGAGAGAFALGRQ---IH-GFMIKACADSDDYIGVALVDMYAK 352

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A  VF+ +  K++  WN L+SG     C  + L  FC + + G ++N  T   V
Sbjct: 353 YGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAV 412

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +++    E      Q+H    K GF S  ++ + LI SY     L  + +        ++
Sbjct: 413 LKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNI 472

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            ++ +M++AL    H  +A+ +F  ++  G +PD ++L ++LN+CA++ AY++ K +H  
Sbjct: 473 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAH 532

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +IK  F T+V+  +A++  YAKCG I+ A +AF        V+ ++ +I   A HG    
Sbjct: 533 LIKRKFMTDVFAGNALVYTYAKCGSIEDADLAF-SGLPDKGVVSWSAMIGGLAQHGHGKR 591

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+++F +M    + P+  T  SV+ AC+H GLVD+    F SM   +G+  + + Y C++
Sbjct: 592 ALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMI 651

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+L R G L+DA  ++  MPF+ +  V+ +LL+  R+H + ELG+ A+EKL +L P+   
Sbjct: 652 DLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSG 711

Query: 755 AHVLLS 760
            HVLL+
Sbjct: 712 THVLLA 717



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 239/521 (45%), Gaps = 13/521 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH  +V+ G+  D+F  N L+ MYSK G       VF ++ + ++VSW   +S  + 
Sbjct: 221 GRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVL 280

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
           +G     L++ + MK++G +PN F + S++K C   GA  F     IH F +K   + + 
Sbjct: 281 HGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDD 340

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           ++G ++++ YAK G +  A +VF  I   D+  WNA+I G +H G   E+L++   M  E
Sbjct: 341 YIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKE 400

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G  +++ T    L+  + +       Q+H L  +        +VN LID Y K + + YA
Sbjct: 401 GSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYA 460

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVFE  +  ++I++ ++    S+  +      LF + +  G  P+    S LL  C  L
Sbjct: 461 NKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASL 520

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              + G Q+    +   F+ +    ++L+Y + +CG++E A   F  +  K + +W+ ++
Sbjct: 521 SAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMI 580

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT--- 477
            G   +      L  F  + +  +  N  T   V+   C   +  +V +  G        
Sbjct: 581 GGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVL---CACNHAGLVDEAKGYFSSMKEM 637

Query: 478 -GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAV 534
            G        S +I      G+LD++ E  N      + A WGA+++A  VH+      +
Sbjct: 638 FGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKL 697

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
                 V   EK   ++L  + N+ A+ G +     +   +
Sbjct: 698 AAEKLFVLEPEKSGTHVL--LANTYASAGMWDEVAKVRKLM 736



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 56/120 (46%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F  D+F  N L+  Y+KCG      
Sbjct: 503 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDAD 562

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ++ +VSW+ ++    Q+G     L ++  M      PN   + SV+  C   G
Sbjct: 563 LAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAG 622


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 203/696 (29%), Positives = 345/696 (49%), Gaps = 25/696 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   +  G   D  + N LI +YSK G      RVF+E++ R+ VSW  ++S   QNG
Sbjct: 63  EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L +Y  M   G +P  + + SV+  C        G S+H    K       FVG 
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y + G    AERVFY +   D   +N +I G+A C +G  AL +   M   G++ 
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ + D   G Q+H  + ++ +     +  +L+D+Y+K   ++ A  +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 +V+ WN +   F +  +  ++  LF +   +G RPN  T+  +LR C    ++D
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L++  GF  +  V+  LI M+ + G +E A  V + +  K++ +W  +++GY 
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    D L  F  + + G+  +       +  C   +  +   QIH  +  +G+S    
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  +F      E  D  +W  ++S     G + EA+ +F  + ++G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K + +   + L++ A +   ++ K IH  VIK G + E  V +A+I  Y KCG  + A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M F +    N+V  +NT+I + + HG   EA++ FD+MK                     
Sbjct: 603 MEFSEMSERNEV-SWNTIITSCSQHGRGLEALDFFDQMK--------------------- 640

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
               +G   FKSM  +YG++P PD Y C++D+  R G L+ AK  +E MP      V+R+
Sbjct: 641 ---KEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRT 697

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++H N E+GE A++ LL L P + A++VLLS
Sbjct: 698 LLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLS 733



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/624 (25%), Positives = 294/624 (47%), Gaps = 28/624 (4%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS     +    G  VH    K GF ++ F+ N LI +Y +CG F    RVF 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFY 202

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ V++  ++S   Q    +  L+++ +M+++G  P+   + S++  C S+G  + 
Sbjct: 203 DMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H +  K  +  +  +  S+L+ Y K GDV  A  +F   +  +V  WN ++  +  
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M   GI  +++T+   L+ C+   + D+G QIH L +++  E  + +
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYV 382

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
              LIDMY K   ++ A +V E + +KDV+SW ++  G+ +++      + F +    G 
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGI 442

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+++  +  +  C  +  +  GLQ+       G+  + ++ ++L+ ++ RCG +  A S
Sbjct: 443 WPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ + +K+  TWN L+SG+  +    + LK F  + +SGV+ N  TF   +        
Sbjct: 503 SFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAE 562

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            +   QIH  +IKTG S    + ++LI  Y   G   D   EFS  +ER +  SW  +++
Sbjct: 563 IKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSER-NEVSWNTIIT 621

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           +    G   EA+  F  + + G                   +Y ++ S      K G   
Sbjct: 622 SCSQHGRGLEALDFFDQMKKEGL------------------SYFKSMS-----DKYGIRP 658

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                + VID + + G +  A+   ++   + D +V+ TL+ A   H  + E  E+  K 
Sbjct: 659 RPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNI-EVGELAAK- 716

Query: 643 KLANLQP-SQATFVSVMSACSHKG 665
            L  L+P   A++V + +A +  G
Sbjct: 717 HLLELEPHDSASYVLLSNAYAVTG 740



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 187/384 (48%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  D + ++  L+   +L     GTQ+H ++ K G ++D  ++ +L+ +Y KCG    
Sbjct: 238 SGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVET 297

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L +F+     N+V W LI+ A  Q  +     +++  M+T G  PN+F    +++ C  
Sbjct: 298 ALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTC 357

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            G  + G  IH  ++K   E + +V   +++ Y+K G +  A RV   +   DV  W +M
Sbjct: 358 TGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSM 417

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY    Y  +AL     M   GI  D     +A+ GC+ +     G QIH  +  S  
Sbjct: 418 IAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGY 477

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +SI NAL+++Y +   +  AF  FE +  KD I+WN L  GF+++    +   +F +
Sbjct: 478 SGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMR 537

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              SG + N  TF   L     L ++  G Q+    +  G   E  V ++LI ++ +CG+
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597

Query: 398 VEMAHSVFDNVSYKNITTWNELLS 421
            E A   F  +S +N  +WN +++
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIIT 621



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 34/308 (11%)

Query: 31  NNQFCSDSF----------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIF 80
            +++C D+           +  D I LA ++S    +K+   G Q+H  +   G++ D+ 
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           + N L+ +Y++CG        F+E+  ++ ++W  +VS   Q+G  +  LK+++ M  +G
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
              N F   S +    ++   + G  IH   +K        VG ++++ Y K G    A+
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAK 602

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
             F  +S  +   WN +I   +  G G EAL+    M  EG++                 
Sbjct: 603 MEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSY---------------- 646

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
            F      +G+  R +    +      ID++ ++  +D A K  E M    D + W TL 
Sbjct: 647 -FKSMSDKYGIRPRPDHYACV------IDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLL 699

Query: 320 GGFSENKN 327
                +KN
Sbjct: 700 SACKVHKN 707



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 13/192 (6%)

Query: 556 LNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +C   G  +Q    IH   I  G   +  V + +ID Y+K G +  AR  F++  ++ 
Sbjct: 48  LRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEE-LSAR 106

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +  ++  YA +GL  EA+ ++ +M  A + P+     SV+S+C+   L  +G    
Sbjct: 107 DNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG---- 162

Query: 675 KSMDSQ---YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           +S+ +Q    G          L+ +  R G    A+ V   MP + + T + +L+SG   
Sbjct: 163 RSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVT-FNTLISG--- 218

Query: 732 HGNKELGEWASE 743
           H     GE A E
Sbjct: 219 HAQCAHGEHALE 230


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 212/724 (29%), Positives = 369/724 (50%), Gaps = 17/724 (2%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L + L  + + +    G ++H  IV LG   +  L N+L+ +Y KC   G    VF 
Sbjct: 29  PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFS 86

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +  R+  SWT I++A  ++G+    + M+  M+  G   +     +V+K C  +G    
Sbjct: 87  RLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G SIH + ++  +E    +   +L+ Y   G VA+A  +F  +  D V  WNA I   A 
Sbjct: 147 GRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERMERDLVS-WNAAIAANAQ 205

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G    AL +   M  EG+   + T +  L  C   A     R IH ++  S +E ++ +
Sbjct: 206 SGDLDMALELFQRMQLEGVRPARITLVITLSVC---AKIRQARAIHSIVRESGLEQTLVV 262

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             AL   Y +   +D A +VF+R A++DV+SWN + G ++++ +  + A LF + +  G 
Sbjct: 263 STALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI 322

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+ VT       C  L     G  +   AL  G   +  + ++L+ M+ RCG+ E A  
Sbjct: 323 PPSKVTLVNASTGCSSL---RFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARH 379

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F+ +   N  +WN +++G          L+ F  +   G+     T+  ++E    +  
Sbjct: 380 LFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 464 QQMV----GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGA--ERLDMAS 516
           +        ++H  I+  G++S   I ++++K Y + G +D +   F  GA  +R D+ S
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W A++S+L   GH   A+  F  +   G  P++     +L++CA   A      +H  + 
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLR 558

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G  + V+VA+A+   Y +CG ++ AR  F++     DV+++N +I AY+ +GL  EA+
Sbjct: 559 HSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEAL 618

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           ++F +M+    +P + +FVSV+SACSH GL D+G  +F+SM   YG+ PS D Y C VD+
Sbjct: 619 KLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDV 678

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L R G+L DA+ +I  M  +P+  V+++LL  CR + + + G  A+  +  L P +++A+
Sbjct: 679 LGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAY 738

Query: 757 VLLS 760
           V+LS
Sbjct: 739 VVLS 742


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 214/725 (29%), Positives = 359/725 (49%), Gaps = 29/725 (4%)

Query: 58  KSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCG---YFGWGLRVFDEMAERNLVSW 113
           +S   G +VH HI+  G F   + L N LI MY KCG          VFD+M ++++VSW
Sbjct: 12  RSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSW 71

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           + I++A  Q G     + ++  M      PNE  + S +  C        G +IH   L 
Sbjct: 72  SCIIAAYGQAGHCREAINLFQRMDVE---PNEMVIVSTLAACSGAKDLALGMAIHARILS 128

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             + K+ FVG ++LN YAK G +  A  VF  +   DV  W AMI  +A  G   +AL  
Sbjct: 129 PDLRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALET 188

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           +  M+   +  +  TF+ A+  CS     D GR+IH  +I   +   I+I NAL+ MY K
Sbjct: 189 LEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAK 248

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            S  + A  VF+RM D++ +SWN++   F+ +        LFH   L G +P+ V+F  +
Sbjct: 249 GSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGV 308

Query: 354 LRQCGKLLDL----DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           L  C     L     +  QL+  A+H     + +V +SL+  + +CG +E A  +F  + 
Sbjct: 309 LSACSSTGCLRSCKRIHSQLELAAVHSP--PDLSVENSLVTAYAKCGDLEAAERIFQRIP 366

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            KN+ +W  +L+ Y F+   +  L+ +  +    ++ +      V+       +  +  +
Sbjct: 367 GKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARK 426

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H  +  + F     I ++LI  Y   G L+ +    +G ER ++ SW AMM + V  G+
Sbjct: 427 LHARVASSSFMLKIQIQNALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGY 486

Query: 530 NHEAVTIFHSL-------VEAGEK--PDEYILGTILNSCAAIGAYQRTKSIHPFV----- 575
           + EA+ +F  +       +E+G +  PD  +   +L + A +G     + IH  +     
Sbjct: 487 DEEAIALFSEMKTGNSKAMESGLRSSPDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNP 546

Query: 576 -IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            I  G  T V + +A++  YA+CG +  A  AF     + D + +++L+  YAHHG    
Sbjct: 547 EILAGSTTNVTLGNALVSMYARCGSMGDASAAFHH-MRARDTVTWSSLVAGYAHHGHAEY 605

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+ ++  M L  +QP   T+VS++++CSH GL+ +    F SM   + +   PD + C+V
Sbjct: 606 AILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMV 665

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+L R G++  A+ V+  MPFQP    + +LL  C++HG+ + G  A+   + + P    
Sbjct: 666 DVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHGDAQRGAVAARNAVGISPGFAG 725

Query: 755 AHVLL 759
           + VLL
Sbjct: 726 STVLL 730



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 143/616 (23%), Positives = 271/616 (43%), Gaps = 32/616 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  + + +  +L+     K   LG  +H  I+       +F+   L+ MY+KCG      
Sbjct: 96  VEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQAR 155

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD+M  +++VSWT +++A  Q G+    L+    M      PN     + +  C S  
Sbjct: 156 AVFDQMPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSRE 215

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH   + + +  +  +  ++++ YAK      A  VF  +   +   WN+MI 
Sbjct: 216 FLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIA 275

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            +A       A+ +   M  EGI  D  +F+  L  CS        ++IH  +  + V  
Sbjct: 276 AFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHS 335

Query: 280 S--ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +S+ N+L+  Y K   ++ A ++F+R+  K+V+SW  +   ++ + N  +   L+ K
Sbjct: 336 PPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDK 395

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            +    +P+ V    ++     + D+ L  +L        F+ +  + ++LI M+ RCG+
Sbjct: 396 MVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYARCGS 455

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-------WESGVEVNGCT 450
           +E A  VFD +  KN+ +WN ++  Y  +  D + +  F  +        ESG+  +   
Sbjct: 456 LEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSSPDC 515

Query: 451 FFYVVETCCRSENQQMV-GQ-IHGAI------IKTGFSSCGYICSSLIKSYVNFGQL-DN 501
              V+  C  +   ++  G+ IH  +      I  G ++   + ++L+  Y   G + D 
Sbjct: 516 IMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSMGDA 575

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S  F +   R D  +W ++++   H GH   A+ ++  +   G +PD     +ILNSC+ 
Sbjct: 576 SAAFHHMRAR-DTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSH 634

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASA-------VIDAYAKCGDIKGARMAFDQSFNSN 614
            G   + +  H FV  +    E +  +A       ++D   + G +  A           
Sbjct: 635 AGLLAQAR--HFFVSMV----EDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQP 688

Query: 615 DVIVYNTLIMAYAHHG 630
           DV+ +NTL+     HG
Sbjct: 689 DVVAWNTLLGCCKVHG 704


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 230/824 (27%), Positives = 404/824 (49%), Gaps = 73/824 (8%)

Query: 1   MRILKRAFLFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSL--SENLK 58
           MR+ +   LF      H H T+   +R        + S   + P     + S    E  K
Sbjct: 8   MRLTRVVLLF------HQHLTKNIPYRRVRIFSISTASVNHEKPATSVANFSFVFKECAK 61

Query: 59  SRV--LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
            R   LG Q H H++  GF   +F+ N L+ +Y  CG  G+  ++FD M  R++VSW  +
Sbjct: 62  QRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAM 121

Query: 117 V-------------------------------SAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           +                               S  +Q GE    +K++++M  +G   + 
Sbjct: 122 IFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDN 181

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
            +   ++KVC  +   + G  IH  AL++  + +   G ++L+ YAK   +  +  VFY+
Sbjct: 182 KSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYA 241

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   +   W+A+I G     +    L +   M   G+ + +  + + L+ C+ + D  +G
Sbjct: 242 MPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLG 301

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            Q+H   ++S+      +  A +DMY K + M  A ++F+   + ++ S+N +  G+S+ 
Sbjct: 302 TQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQK 361

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
            N  +   LF K   S    + ++ S  LR C  +  L  GLQL  LA    F     V 
Sbjct: 362 DNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVA 421

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++ I M+ +C A++ A  VFD +  K+  +WN +++ +  N   +  L    ++  SG+E
Sbjct: 422 NAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGME 481

Query: 446 VNGCTFFYVVETCC-RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD---- 500
            +  TF  V++ C   S N  M  +IH  I+K G +S  YI SSL+  Y   G +D    
Sbjct: 482 PDEYTFGSVLKACAGDSLNHGM--EIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEK 539

Query: 501 ----------NSFEFSNGAERLD-------------MASWGAMMSALVHQGHNHEAVTIF 537
                     +S  +S   E ++             + SW A++S  V +  + +A   F
Sbjct: 540 IHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFF 599

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           + ++E G  PD++   T+L++CA + +    K IH  VIK     +VY+ S ++D Y+KC
Sbjct: 600 NRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKC 659

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G++  +R+ F+++    D + +N +I  YAHHG+  EA+++F+ M L N+ P+ ATFVS+
Sbjct: 660 GNLHDSRLMFEKA-PIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSL 718

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + AC+H GLV++G   F  M  +YG+ P  + Y  +VD+L ++G +E A  +I+ MPF+ 
Sbjct: 719 LRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEA 778

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLL-PKNDAAHVLLS 760
              ++R+LLS C+I+ N       +   LL L P++ + ++LLS
Sbjct: 779 DDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLS 822


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 199/733 (27%), Positives = 370/733 (50%), Gaps = 22/733 (3%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           K+G   D      +I+  +  G       +   +   + V+W  ++S+  Q+G       
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFG 313

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           +Y DMK  G MP      S++    SM A + G  IH  A+K  ++ N FVG S++N Y 
Sbjct: 314 LYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYV 373

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G ++ A++VF   +  ++  WNAM+ G+       E + +   M    +  D +TF++
Sbjct: 374 KHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVS 433

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C  +   DIGRQ+H + I++ ++  + + NA++DMY K   +D A  +F  +  KD
Sbjct: 434 VLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKD 493

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            +SWN L  G + N+   +   +  +    G  P+ V+F+  +  C  +   + G Q+ C
Sbjct: 494 SVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHC 553

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
            ++         V SSLI ++ + G VE +  V  +V   ++   N L++G   N  + +
Sbjct: 554 ASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDE 613

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF----SSCGYICS 487
            ++ F  + + G + +  TF  ++  C    +  +  Q+H   +K+      +S G    
Sbjct: 614 AIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGI--- 670

Query: 488 SLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           SL+  Y+    L+++ +  +   +  ++  W A +S     G++ +++ +F  +     +
Sbjct: 671 SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVR 730

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            DE    ++L +C+ I A    K IH  +IK GF +    ASA++D Y+KCGD+  +   
Sbjct: 731 SDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEI 790

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F +  N  +++ +N++I+ +A +G  +EA+ +F KM+ + L+P + T + V+ ACSH GL
Sbjct: 791 FKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGL 850

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           + +G  LF SM   YG+ P  D Y CL+D+L R G+L++A+ VI+ +PF+    ++ + L
Sbjct: 851 ISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFL 910

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLLD 772
           + C++H ++E G+ A++KL+ + P+  + +V LS               R+  RE  ++ 
Sbjct: 911 AACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMK 970

Query: 773 HEGVCNVNDGIKT 785
             G   +  G KT
Sbjct: 971 FPGCSWITVGNKT 983



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/622 (26%), Positives = 302/622 (48%), Gaps = 9/622 (1%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  LS + ++ +   G Q+H   VK G   ++F+ ++LI +Y K G      +VFD   E
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTE 390

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           +N+V W  ++   +QN   +  ++M+  M+      ++F   SV+  C+++ + + G  +
Sbjct: 391 KNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQV 450

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           HC  +K  ++ + FV  ++L+ Y+KLG +  A+ +F  I   D   WNA+I G AH    
Sbjct: 451 HCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEE 510

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            EA+ ++  M   GI  D+ +F  A+  CS +   + G+QIH   I+  V  + ++ ++L
Sbjct: 511 EEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSL 570

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ID+Y K   ++ + KV   +    ++  N L  G  +N    +   LF + +  G +P++
Sbjct: 571 IDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSN 630

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFD 406
            TF+ +L  C   +   +G Q+    L    L+++ ++  SL+ ++ +C  +E A+ +  
Sbjct: 631 FTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLA 690

Query: 407 NVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            V  +KN+  W   +SGY  N      L  F  +    V  +  TF  V++ C       
Sbjct: 691 EVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALT 750

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSAL 524
              +IHG IIK+GF S     S+L+  Y   G + +SFE F     + ++  W +M+   
Sbjct: 751 DGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGF 810

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTE 583
              G+ +EA+ +F  + E+  KPDE  L  +L +C+  G     +++   + ++ G    
Sbjct: 811 AKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPR 870

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V   + +ID   + G ++ A+   DQ     D +++ T + A   H    E        K
Sbjct: 871 VDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHK--DEERGKVAAKK 928

Query: 644 LANLQPSQAT---FVSVMSACS 662
           L  ++P +++   F+S + A +
Sbjct: 929 LVEMEPQRSSTYVFLSSLHAAA 950



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 166/705 (23%), Positives = 311/705 (44%), Gaps = 50/705 (7%)

Query: 26  HRLCGNNQFCSDSFLR--------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
           H   G+ +   D+F R         D   LA  LS    L +   G QVH  ++K GF +
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
             F Q  L+ MY+KC       RVFD +A  + + W  +++   + G +   L ++  M+
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G  P++    +++    SMG                                +L D  
Sbjct: 254 KMGSAPDQVTYVTIISTLASMG--------------------------------RLSD-- 279

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  +   I       WNA+I  Y+  G   E   +   M  +G+   + TF + L   +
Sbjct: 280 -ARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAA 338

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            +  FD G+QIH   ++  ++ ++ + ++LI++Y+K   +  A KVF+   +K+++ WN 
Sbjct: 339 SMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 398

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  GF +N    +T  +F     +    +  TF  +L  C  L  LD+G Q+ C+ +   
Sbjct: 399 MLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS 458

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +  V ++++ M+ + GA+++A ++F  +  K+  +WN L+ G   N  + + +    
Sbjct: 459 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLK 518

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +   G+  +  +F   +  C      +   QIH A IK    S   + SSLI  Y  FG
Sbjct: 519 RMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFG 578

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            +++S +     +   M    A+++ LV      EA+ +F  +++ G KP  +   +IL+
Sbjct: 579 DVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILS 638

Query: 558 SCAAIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            C    +    K +H + +K    N +  +  +++  Y KC  ++ A     +  +  ++
Sbjct: 639 GCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNL 698

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CL 672
           + +   I  YA +G   +++ +F +M+  +++  +ATF SV+ ACS    +  G     L
Sbjct: 699 VEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGL 758

Query: 673 LFKSMDSQYGMQPSP--DCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           + KS    Y    S   D Y    D++S     ++ K+   IMP+
Sbjct: 759 IIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPW 803



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 267/608 (43%), Gaps = 40/608 (6%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTL 115
           ++R  G  +H  +++LG      L + L+ +Y + G  G+  R       A  +  + + 
Sbjct: 71  QARACGV-LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASS 129

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++S   ++G     L  +  ++ + G  P++F +  V+  C  +GA E G  +HC  LK 
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               + F    +++ YAK  +V  A RVF  I+  D  CW +MI GY   G   +AL + 
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           S M   G   D+ T+                               ++I++ L  M    
Sbjct: 250 SRMEKMGSAPDQVTY-------------------------------VTIISTLASM---- 274

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A  + +R+     ++WN +   +S++    +   L+      G  P   TF+ +L
Sbjct: 275 GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASML 334

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +   D G Q+   A+  G      V SSLI ++ + G +  A  VFD  + KNI 
Sbjct: 335 SAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIV 394

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN +L G+  N    + ++ F  +  + +E +  TF  V+  C   ++  +  Q+H   
Sbjct: 395 MWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCIT 454

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           IK    +  ++ ++++  Y   G +D +    +     D  SW A++  L H     EAV
Sbjct: 455 IKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAV 514

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +   +   G  PDE    T +N+C+ I A +  K IH   IK    +   V S++ID Y
Sbjct: 515 YMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLY 574

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +K GD++ +R       +++ ++  N LI     +    EA+E+F ++     +PS  TF
Sbjct: 575 SKFGDVESSRKVLAH-VDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTF 633

Query: 655 VSVMSACS 662
            S++S C+
Sbjct: 634 ASILSGCT 641



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/542 (24%), Positives = 246/542 (45%), Gaps = 22/542 (4%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q+   + L  D       L    NL S  +G QVH   +K     D+F+ N ++ MYSK 
Sbjct: 417 QYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKL 476

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +F  +  ++ VSW  ++     N E +  + M   MK  G  P+E +  + +
Sbjct: 477 GAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAI 536

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C ++ A+E G  IHC ++K  +  N  VG S+++ Y+K GDV ++ +V   + +  + 
Sbjct: 537 NACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMV 596

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
             NA+I G        EA+ +   +L +G     +TF + L GC+      IG+Q+H   
Sbjct: 597 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYT 656

Query: 273 IRSEV---ECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNP 328
           ++S +   + S+ I  +L+ +Y+K   ++ A K+   + D K+++ W     G+++N   
Sbjct: 657 LKSALLNQDTSLGI--SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYS 714

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            Q+  +F +      R +  TF+ +L+ C ++  L  G ++  L +  GF+  E   S+L
Sbjct: 715 DQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASAL 774

Query: 389 IYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           + M+ +CG V  +  +F  +  K NI  WN ++ G+  N    + L  F  + ES ++ +
Sbjct: 775 MDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPD 834

Query: 448 GCTFFYVVETCCR----SENQQM---VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             T   V+  C      SE + +   + Q++G + +    +C      LI      G L 
Sbjct: 835 EVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYAC------LIDLLGRGGHLQ 888

Query: 501 NSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNS 558
            + E  +    R D   W   ++A                LVE   ++   Y+  + L++
Sbjct: 889 EAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHA 948

Query: 559 CA 560
            A
Sbjct: 949 AA 950



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 128/278 (46%), Gaps = 12/278 (4%)

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDM 514
           T  R+   +  G +H  +++ G    G +  +L+  Y   G++  ++             
Sbjct: 65  TPHRTHQARACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASG 124

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           A+  +++S     G   + +  F  L    G  PD++ L  +L++C+ +GA ++ + +H 
Sbjct: 125 AAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHC 184

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            V+K GF +  +  + ++D YAKC ++K AR  FD      D I + ++I  Y   G   
Sbjct: 185 DVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFD-GIACPDTICWASMIAGYHRVGRYQ 243

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           +A+ +F +M+     P Q T+V+++S  +  G +     L K +       PS   +  +
Sbjct: 244 QALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQ-----MPSTVAWNAV 298

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQ---PSPTVYRSLLSG 728
           +   S++G   +   + + M  Q   P+ + + S+LS 
Sbjct: 299 ISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSA 336


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 214/703 (30%), Positives = 370/703 (52%), Gaps = 11/703 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H HIV  G  +D FL ++L+ MY KCG     ++VF  +  R+L SW  I++A  +
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAFAK 64

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      ++M+  M + G  P+   + SV+  C S+   E G  IH  AL   +  +  V
Sbjct: 65  NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIV 124

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ YA+   +  A  VF  I S  V  WNAMI   A  G   +AL +   M  E  
Sbjct: 125 QNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELEP- 183

Query: 243 TMDKYTFINALQGCSLVADF-DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             ++ TF +    CSL+ D  ++G++IH  I  S +E ++++  A++ MY K   +  A 
Sbjct: 184 --NEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMAR 241

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF  +  K+V+SWN + G +++N    +   ++H+ +    + + VT  I L     L 
Sbjct: 242 QVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLR 301

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG++L  L++  G+     V ++LI M+ +C  ++ A  VF  V   ++ +W  L+ 
Sbjct: 302 LLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIV 361

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII--KTGF 479
            Y  +  + + L+ +  +   G+E +  TF  V+  C  + + ++   +H  ++  K GF
Sbjct: 362 AYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGF 421

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           S  G + ++LI  YV  G+LD S E F +  +   +  W AM++A   +G++  AV ++ 
Sbjct: 422 SD-GVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYD 480

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKC 597
            + + G  PDE  L +IL++CA +   ++ + +H  +I     +    V +A+I  YA C
Sbjct: 481 MMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASC 540

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G+I+ A+  F +  N  DV+ +  LI AY   G    A+ ++ +M +  +QP++ TF+ V
Sbjct: 541 GEIREAKAVFKRMKN-RDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCV 599

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
             AC H GLVD+    F+SM     + P+ D Y C+V +LSR G LE+A+ ++  MPF P
Sbjct: 600 FLACGHAGLVDECKWYFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNP 658

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
               + SLL  CR HG+ +    A+++ + L  ++ A +VLLS
Sbjct: 659 GSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSAPYVLLS 701



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/617 (24%), Positives = 283/617 (45%), Gaps = 11/617 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   L+  L    +L+    G ++H   +  G ++ I +QN L++MY++C       
Sbjct: 83  IKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVAR 142

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM- 158
            VFD++  +++VSW  +++A  + GE +  L+++  M+     PNE    SV   C  + 
Sbjct: 143 VVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLLP 199

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              E G  IH       +E N  V  +++  Y K G V  A +VF  I   +V  WNAM+
Sbjct: 200 DHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAML 259

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G Y       EAL V   M+ + +  D+ T + AL   + +    +G ++H L +    +
Sbjct: 260 GAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYD 319

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +I + NALI MY K + +D A +VF ++   DV+SW  L   ++++    +   L+ + 
Sbjct: 320 SNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQM 379

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLG--LQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
              G  P+ VTF+ +L  C    DL+LG  L  + LA   GF D   + ++LI M+ +CG
Sbjct: 380 EGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGV-LVAALINMYVKCG 438

Query: 397 AVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
            ++++  +F +    K +  WN +++ Y         +  +  + + G++ +  T   ++
Sbjct: 439 RLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSIL 498

Query: 456 ETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             C   ++ +   Q+H  II +   S    + ++LI  Y + G++  +       +  D+
Sbjct: 499 SACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDV 558

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW  ++SA V  G    A+ ++  ++  G +P E     +  +C   G     K     
Sbjct: 559 VSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLACGHAGLVDECKWYFQS 618

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGAR-MAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           +I+          S V+   ++ G ++ A  +     FN   V  + +L+ A   HG + 
Sbjct: 619 MIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSV-GWTSLLGACRTHGDLK 677

Query: 634 EAMEIFDKMKLANLQPS 650
            A    D+    + Q S
Sbjct: 678 RARRAADEAMELDRQDS 694



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 82/173 (47%), Gaps = 3/173 (1%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  + + IH  ++  G  ++ ++   ++  Y KCG +  A   F  S     +  +N +I
Sbjct: 1   ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVF-HSLPRRSLFSWNFII 59

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            A+A +    +A+E+F  M  A ++P  AT  SV+ ACS    +++G  +     ++ G+
Sbjct: 60  AAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALAR-GL 118

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
             S      LV M +R   L+ A+ V + +  + S   + ++++ C   G  E
Sbjct: 119 SSSIIVQNALVSMYARCSRLDVARVVFDKIESK-SVVSWNAMIAACARQGEAE 170


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 225/758 (29%), Positives = 374/758 (49%), Gaps = 79/758 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           +LA  L    + + ++ G  +HG IV++G  +D +L N L+ +Y +CG   +  +VFDEM
Sbjct: 8   YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67

Query: 106 A-------------------------------ERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           +                               ER++VSW  ++S  ++ G  +  L +Y 
Sbjct: 68  SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M  +GF+P+ F + SV+  C  +    FG   H  A+K  ++KN FVG ++L+ YAK G
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187

Query: 195 -DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
             V    RVF S+S  +   + A+IGG A      EA+ +   M  +G+ +D     N L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247

Query: 254 ------QGCSLVADF---DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
                 +GC  +++    ++G+QIH L +R      + + N+L+++Y K+  M+ A  +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M + +V+SWN +  GF +     ++     +   SG +PN VT   +L  C       
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------- 360

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
                                        R G VE    +F ++   +++ WN +LSGY 
Sbjct: 361 ----------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYS 392

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                 + +  F  +    ++ +  T   ++ +C R    +   QIHG +I+T  S   +
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 452

Query: 485 ICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I S LI  Y    +++ S   F +    LD+A W +M+S   H   + +A+ +F  + + 
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512

Query: 544 GEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
               P+E    T+L+SC+ + +    +  H  V+K G+ ++ +V +A+ D Y KCG+I  
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD     N VI +N +I  Y H+G   EA+ ++ KM  +  +P   TFVSV++ACS
Sbjct: 573 ARQFFDAVLRKNTVI-WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLV+ G  +  SM   +G++P  D Y C+VD L R G LEDA+ + E  P++ S  ++
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLW 691

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             LLS CR+HG+  L    +EKL+ L P++ AA+VLLS
Sbjct: 692 EILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 36/334 (10%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   L+  LS    L+    G Q+HG +++   + +  + + LIA+YS+C       
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471

Query: 100 RVFDE-MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVS 157
            +FD+ + E ++  W  ++S    N      L ++  M     + PNE +  +V+  C  
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + +   G   H   +K     + FV  ++ + Y K G++ +A + F ++   +   WN M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHG 270
           I GY H G G EA+ +   M+  G   D  TF++ L  CS     + G       ++IHG
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I  E++  I IV+ L        G     +  E++A+                  P +
Sbjct: 652 --IEPELDHYICIVDCL--------GRAGRLEDAEKLAE----------------ATPYK 685

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++S+  + +LS  R  H   S+  R   KL+ LD
Sbjct: 686 SSSVLWEILLSSCRV-HGDVSLARRVAEKLMRLD 718


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/610 (31%), Positives = 329/610 (53%), Gaps = 1/610 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ CV       G  +H   L+  ++ N ++  ++L  Y   G V  A R+F   S+  
Sbjct: 50  LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKS 109

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN MI GYAH G G EA N+ + M  EG+  DK+TF++ L  CS  A  + GR++H 
Sbjct: 110 VVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHV 169

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            ++ + +  + ++ NALI MY K   +  A +VF+ MA +D +SW TL G ++E+    +
Sbjct: 170 RVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           +   +H  +  G RP+ +T+  +L  CG L  L+ G Q+    +      +  V+++L  
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CGAV+ A  VF+ +  +++  WN ++ G   +    +    F  + +  V  +  T
Sbjct: 290 MYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVT 349

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  ++  C R        +IH   +K G  S     ++LI  Y   G + ++ +  +   
Sbjct: 350 YLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           + D+ SW A++      G   E+ + F  +++ G + ++     +L +C+   A +  K 
Sbjct: 410 KRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKE 469

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           IH  V+K G   ++ VA+A++  Y KCG ++ A +   +  ++ DV+ +NTLI   A +G
Sbjct: 470 IHAEVVKAGIFADLAVANALMSMYFKCGSVEDA-IRVSEGMSTRDVVTWNTLIGGLAQNG 528

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              EA++ F+ MK   ++P+  TFV+VMSAC  + LV++G   F SM   YG+ P+   Y
Sbjct: 529 RGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHY 588

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L+R G+L +A+ VI  MPF+PS  ++ +LL+ CR HGN E+GE A+E+ L L P
Sbjct: 589 ACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEP 648

Query: 751 KNDAAHVLLS 760
           +N   +V LS
Sbjct: 649 QNAGTYVSLS 658



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 253/502 (50%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K   +G QVH HI++ G   ++++ N L+ +Y  CG      R+FD+ + +++VSW +++
Sbjct: 58  KDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMI 117

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S     G       ++  M+  G  P++F   S++  C S  A  +G  +H   ++  + 
Sbjct: 118 SGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLA 177

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            N  VG ++++ YAK G V  A RVF +++S D   W  + G YA  GY  E+L    +M
Sbjct: 178 NNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAM 237

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           L EG+   + T++N L  C  +A  + G+QIH  I+ SE    + +  AL  MYIK   +
Sbjct: 238 LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAV 297

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A +VFE + ++DVI+WNT+ GG  ++    +   +FH+ +     P+ VT+  +L  C
Sbjct: 298 KDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC 357

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +   L  G ++   A+  G + +    ++LI M+ + G+++ A  VFD +  +++ +W 
Sbjct: 358 ARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 417

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            L+ GY       +   TF  + + GVE N  T+  V++ C      +   +IH  ++K 
Sbjct: 418 ALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKA 477

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G  +   + ++L+  Y   G ++++   S G    D+ +W  ++  L   G   EA+  F
Sbjct: 478 GIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKF 537

Query: 538 HSLVEAGEKPDEYILGTILNSC 559
             +     +P+      ++++C
Sbjct: 538 EVMKSEEMRPNATTFVNVMSAC 559



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 245/540 (45%), Gaps = 30/540 (5%)

Query: 26  HRLCGNNQF-----CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIF 80
           HR  G   F          L  D       LS   +  +   G +VH  +++ G  N+  
Sbjct: 122 HRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNAT 181

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           + N LI+MY+KCG      RVFD MA R+ VSWT +  A  ++G     LK Y  M   G
Sbjct: 182 VGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEG 241

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+     +V+  C S+ A E G  IH   ++     +  V  ++   Y K G V  A 
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
            VF  + + DV  WN MIGG    G   EA  +   ML E +  D+ T++  L  C+   
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               G++IH   ++  +   +   NALI+MY K+  M  A +VF+RM  +DV+SW  L G
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+++     ++ S F K +  G   N +T+  +L+ C   + L  G ++    +  G   
Sbjct: 422 GYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA 481

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V ++L+ M+ +CG+VE A  V + +S +++ TWN L+ G   N    + L+ F  + 
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMK 541

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF----SSCGYIC-SSLIKSYVN 495
              +  N  TF  V+ + CR  N    G+   A ++  +    +   Y C   ++    +
Sbjct: 542 SEEMRPNATTFVNVM-SACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGH 600

Query: 496 FGQLDN---SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
            G+ ++   +  F   A     A WGA+++A    G+           VE GE+  E  L
Sbjct: 601 LGEAEDVILTMPFKPSA-----AMWGALLAACRAHGN-----------VEIGEQAAEQCL 644



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 258/546 (47%), Gaps = 36/546 (6%)

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           +   +V+  +  +G  +D Y ++  LQ C    D  +G+Q+H  I+R  ++ ++ I+N L
Sbjct: 26  YAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTL 85

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPN 346
           + +Y+    ++ A ++F++ ++K V+SWN +  G++ ++  GQ A +LF      G  P+
Sbjct: 86  LKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYA-HRGLGQEAFNLFTLMQQEGLEPD 144

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             TF  +L  C     L+ G ++    +  G  +   V ++LI M+ +CG+V  A  VFD
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFD 204

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            ++ ++  +W  L   Y  +    + LKT+  + + GV  +  T+  V+  C      + 
Sbjct: 205 AMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEK 264

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIH  I+++   S   + ++L K Y+  G + ++ E        D+ +W  M+  LV 
Sbjct: 265 GKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVD 324

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G   EA  +FH +++    PD      IL++CA  G     K IH   +K G  ++V  
Sbjct: 325 SGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A+I+ Y+K G +K AR  FD+     DV+ +  L+  YA  G V E+   F KM    
Sbjct: 385 GNALINMYSKAGSMKDARQVFDR-MPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQG 443

Query: 647 LQPSQATFVSVMSACS-----------HKGLVDKG------------CLLFKSMDSQYGM 683
           ++ ++ T++ V+ ACS           H  +V  G             + FK    +  +
Sbjct: 444 VEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAI 503

Query: 684 QPSPD-------CYGCLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGCRIHG 733
           + S          +  L+  L++NG   +A    E+M     +P+ T + +++S CR+  
Sbjct: 504 RVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRN 563

Query: 734 NKELGE 739
             E G 
Sbjct: 564 LVEEGR 569


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 207/698 (29%), Positives = 345/698 (49%), Gaps = 1/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q H  ++  G   +  L   L+ MY  CG F     +F ++       W  ++     
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+FD  L  Y  M   G +P+++    V+K C  + +   G  +H     +  E + FV
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++ FY++ G +  A  +F  + S D   WN M+ GY   G    A  V   M     
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  TF   L  C+     + G Q+HGL++ S +E    + N L+ MY K   +  A +
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARR 304

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M   D+++WN +  G+ +N    + + LFH+ I +  +P+ +TFS  L    +   
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGAT 364

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++ C  +  G   +  + S+LI ++ +C  VEMA  +FD  +  +I     ++SG
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISG 424

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N  + + L+ F  + +  +  N  T   V+  C       +  ++HG I+K G    
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ S+++  Y   G+LD + +   G    D   W +M+++    G   EA+ +F  +  
Sbjct: 485 CYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           AG K D   +   L++CA + A    K IH F+++  F ++++  SA+ID Y+KCG++  
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   FD     N+V  +N++I AY +HG + +++ +F  M    +QP   TF++++SAC 
Sbjct: 605 ACRVFDTMEEKNEV-SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 663

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G VD+G   F+ M  + G+    + Y C+VD+  R G L +A  +I  MPF P   V+
Sbjct: 664 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  CR+HGN EL E AS  L  L P+N   +VLLS
Sbjct: 724 GTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLS 761



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 292/636 (45%), Gaps = 7/636 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG  VH  I  +GF  D+F+ ++LI  YS+ G       +FD M  ++ V W ++
Sbjct: 160 LNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVM 219

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  ++NG++D    ++++M+     PN      V+ VC S     FG  +H   +   +
Sbjct: 220 LNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL 279

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  V  ++L  YAK G +  A R+F  +   D+  WN MI GY   G+  EA  +   
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+   +  D  TF + L   S  A    G++IH  IIR+ V   + + +ALID+Y K   
Sbjct: 340 MISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRD 399

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A K+F++    D++    +  G+  N        +F   +    R N VT + +L  
Sbjct: 400 VEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPA 459

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L LG +L    L  G      V S+++ M+ +CG +++AH  F  +S K+   W
Sbjct: 460 CAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCW 519

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++    N    + +  F  +  +G + +  +    +  C          +IH  +++
Sbjct: 520 NSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR 579

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             F S  +  S+LI  Y   G LD +    +  E  +  SW ++++A  + G   +++ +
Sbjct: 580 GAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNL 639

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDA 593
           FH ++  G +PD      I+++C   G  Q  + IH F     +LG    +   + ++D 
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAG--QVDEGIHYFRCMTEELGIMARMEHYACMVDL 697

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           + + G +  A    +    S D  V+ TL+ A   HG V E  E+  +  L +L P  + 
Sbjct: 698 FGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNV-ELAEVASR-NLFDLDPQNSG 755

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +  ++S         +  L  +S+  + G+Q  P C
Sbjct: 756 YYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGC 791



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 196/417 (47%), Gaps = 17/417 (4%)

Query: 10  FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
           F D+ SC FH                  + ++ D I  +  L L     +   G ++H +
Sbjct: 329 FMDEASCLFHEM--------------ISARMKPDSITFSSFLPLLSEGATLRQGKEIHCY 374

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           I++ G + D+FL++ LI +Y KC       ++FD+    ++V  T ++S  + NG  +  
Sbjct: 375 IIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNA 434

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L+++  +       N   + SV+  C  + A   G  +H   LK     + +VG ++++ 
Sbjct: 435 LEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDM 494

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK G +  A + F  IS  D  CWN+MI   +  G   EA+++   M   G   D  + 
Sbjct: 495 YAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSI 554

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             AL  C+ +     G++IH  ++R      +   +ALIDMY K   +D A +VF+ M +
Sbjct: 555 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEE 614

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ- 368
           K+ +SWN++   +  +     + +LFH  +  G +P+HVTF  ++  CG    +D G+  
Sbjct: 615 KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHY 674

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYC 424
            +C+    G +      + ++ +F R G +  A  + +++ +  +   W  LL G C
Sbjct: 675 FRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL-GAC 730



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 218/491 (44%), Gaps = 9/491 (1%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
            ++ LQ C+  +    GRQ H  ++ + +  +  +   L+ MY+       A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
                 WN +  GF+           + K +  G+ P+  TF  +++ CG L  + LG  
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +       GF  +  V SSLI  +   G +  A  +FD +  K+   WN +L+GY  N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             +    F  +  +    N  TF  V+  C          Q+HG ++ +G      + ++
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G L ++    +   + D+ +W  M+S  V  G   EA  +FH ++ A  KPD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                + L   +     ++ K IH ++I+ G + +V++ SA+ID Y KC D++ AR  FD
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           Q     D++V   +I  Y  +G+ + A+EIF  +    ++ +  T  SV+ AC+    + 
Sbjct: 409 QR-TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 467

Query: 669 KGCLLFKS-MDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
            G  L    + + +G      CY    ++DM ++ G L D  H   I         + S+
Sbjct: 468 LGKELHGHILKNGHG----GSCYVGSAIMDMYAKCGRL-DLAHQTFIGISDKDAVCWNSM 522

Query: 726 LSGCRIHGNKE 736
           ++ C  +G  E
Sbjct: 523 ITSCSQNGKPE 533


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 198/708 (27%), Positives = 363/708 (51%), Gaps = 27/708 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  ++   + +   L N L++ YSK   F +  ++FD+M  RN+V+WT ++S+ ++ G
Sbjct: 69  QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYG 128

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                 +M+  M+ +   PNE     +++ C +      G  IH   ++  +E+  F G 
Sbjct: 129 SVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGS 188

Query: 185 SVLNFYAKLGD-VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE--G 241
           S++  Y K GD +  A RVFY +   DV  WN MI G+A  G  F  +  + S ++E  G
Sbjct: 189 SLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNG-DFRMVQRLFSEMWEEQG 247

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ TF + L+ CS++ +     QIHG++ +   E  + + +A++D+Y K   +    
Sbjct: 248 LKPDRITFASLLKCCSVLNEV---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCR 304

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F+ M  KD   W+++  G++ N    +  + F        + +    S  L+ C ++ 
Sbjct: 305 KIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIE 364

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL- 420
           DL+ G+Q+  L +  G  ++  V S L+ ++   G +     +F  +  K+I  WN ++ 
Sbjct: 365 DLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMIL 424

Query: 421 --------SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
                    G C          TF       +++ G T   V+++C +  +     QIH 
Sbjct: 425 AQARPGQGCGRCMQLFQELRRTTF-------LQIQGATLVAVLKSCEKDSDLPAGRQIHS 477

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            I+K+       + ++L+  Y    Q+D++F+      R D +SW +++          +
Sbjct: 478 LIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESK 537

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ +   +++ G     Y L   +++C+ +      K +H F IK G++ +VY+ S++ID
Sbjct: 538 ALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIID 597

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG+I+ +   FD+    N+V  +N +I  YAHHG   +A+E+  K++   + P+  
Sbjct: 598 MYAKCGNIEESEKVFDEQLKPNEV-TFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHV 656

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+++MSACSH G V++   LF  M  +Y ++P  + Y CLVD   R G LE+A  +++ 
Sbjct: 657 TFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK 716

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
                S + +R+LLS CR H N+++GE ++ K++ L P + A ++LLS
Sbjct: 717 ---DGSESAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLS 761



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 182/391 (46%), Gaps = 15/391 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   L+ +L     ++    G QVHG ++K G  ND F+ + L+ +Y+  G  G   
Sbjct: 346 VKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVE 405

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGE-FDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVS 157
           ++F  + ++++V+W  ++ A  + G+     ++++ +++   F+  + A + +V+K C  
Sbjct: 406 KLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEK 465

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                 G  IH   +K  + ++  VG ++++ Y++   +  A + F  I   D   W+++
Sbjct: 466 DSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSI 525

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           IG         +AL +   ML EGI    Y+    +  CS +     G+Q+H   I+S  
Sbjct: 526 IGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGY 585

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
            C + I +++IDMY K   ++ + KVF+     + +++N +  G++ +    Q   +  K
Sbjct: 586 SCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSK 645

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYM 391
              +G  PNHVTF  L+  C        G   +   L    LD+  +       S L+  
Sbjct: 646 LEKNGVAPNHVTFLALMSACSH-----AGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDA 700

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           + R G +E A+ +      +  + W  LLS 
Sbjct: 701 YGRAGRLEEAYQIVQKDGSE--SAWRTLLSA 729



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 132/291 (45%), Gaps = 3/291 (1%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           +FL+     L   L   E       G Q+H  IVK        + N L+ MYS+C     
Sbjct: 447 TFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDD 506

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F ++  ++  SW+ I+    QN      L++  +M   G     +++   +  C  
Sbjct: 507 AFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQ 566

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +     G  +H FA+K     + ++G S+++ YAK G++  +E+VF      +   +NA+
Sbjct: 567 LLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAI 626

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSE 276
           I GYAH G   +A+ V+S +   G+  +  TF+  +  CS     +    +  L++ + +
Sbjct: 627 ISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYK 686

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           ++      + L+D Y ++  ++ A+++ ++  D    +W TL      + N
Sbjct: 687 IKPKSEHYSCLVDAYGRAGRLEEAYQIVQK--DGSESAWRTLLSACRNHSN 735


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 223/701 (31%), Positives = 354/701 (50%), Gaps = 2/701 (0%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           + G QVHG IVK+G  +D+F+  +L+ +Y   G     ++VF EM  +N+VSWT ++ A 
Sbjct: 47  IEGVQVHGFIVKVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAY 106

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +  GE  M + +Y  M++ G   N+  + SV+  CVS+     GY +    +K  +E N 
Sbjct: 107 VDYGEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNV 166

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S+++ +   G V  A  VF  +   D   WN+MI  Y   G   E+L   S M   
Sbjct: 167 SVANSLISMFGYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRV 226

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              ++  T    L GC  V +   GR IH L+++     ++   N LI MY  +   + A
Sbjct: 227 HKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDA 286

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M +KD+ISWN++   ++++ N      L           N+VTF+  L  C   
Sbjct: 287 ELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDP 346

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
                G  L  L +H G  +   V ++L+ ++ + G +  A  VF  +  ++  TWN L+
Sbjct: 347 EFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALI 406

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGF 479
            G+  +    + LK F  + E GV +N  T   V+  C    +    G  IH  II TGF
Sbjct: 407 GGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGF 466

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            S  Y+ +SLI  Y   G L++S    +     + ++W AMM+A  H GH  EA+     
Sbjct: 467 QSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLE 526

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  AG   DE+     L + A +   +  + +H   +KLG ++  +VASA +D Y KCG+
Sbjct: 527 MRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGE 586

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I        +  N +  + +N L  +++ HG   +A E F +M    ++P   TFVS++S
Sbjct: 587 IDDVLRIIPRPINRSR-LSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLS 645

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH G+V++G   + SM  ++G+        C++D+L R+G   +A+  I+ MP  P+ 
Sbjct: 646 ACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTD 705

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+RSLL+ C+ HGN ELG  A E LL L P +D+A+VL S
Sbjct: 706 HVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYS 746



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 163/628 (25%), Positives = 295/628 (46%), Gaps = 17/628 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFD 103
           ++  +S   +L++ +LG QV GH++K G   ++ + N+LI+M+   GYFG       VF 
Sbjct: 134 MSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMF---GYFGSVEEACYVFS 190

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M E + +SW  +++A I+NG     L+ +  M       N   + +++  C S+   ++
Sbjct: 191 GMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKW 250

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  IH   LK     N     +++  Y+  G    AE VF  +   D+  WN+M+  YA 
Sbjct: 251 GRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQ 310

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   +AL ++++M +     +  TF +AL  CS       G+ +H L+I   +  ++ +
Sbjct: 311 DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIV 370

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+ +Y KS  M  A KVF+ M  +D ++WN L GG ++++ P +    F      G 
Sbjct: 371 GNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGV 430

Query: 344 RPNHVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             N++T S +L  C    D L+ G+ +    +  GF  +E V +SLI M+ +CG +  ++
Sbjct: 431 PINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSN 490

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           ++FD ++ KN + WN +++    +    + LK    +  +GV V+  +F   +    +  
Sbjct: 491 NIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLA 550

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             +   Q+HG  +K G  S  ++ S+ +  Y   G++D+              SW  + S
Sbjct: 551 ILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTS 610

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFN 581
           +    G   +A   FH ++  G KPD     ++L++C+  G  +   + +  +IK  G  
Sbjct: 611 SFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIP 670

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG---LVSEAMEI 638
            ++     +ID   + G    A     +   S    V+ +L+ A   HG   L  +A+E 
Sbjct: 671 AKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVE- 729

Query: 639 FDKMKLANLQPS-QATFVSVMSACSHKG 665
                L  L PS  + +V   + C+  G
Sbjct: 730 ----NLLKLDPSDDSAYVLYSNICATTG 753


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 216/760 (28%), Positives = 358/760 (47%), Gaps = 81/760 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-- 103
           +LA  L    + K+ + G  +H H+++   ++D FL N LI  Y+KC       R+FD  
Sbjct: 7   YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66

Query: 104 -----------------------------EMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                                        EM ERN+VSW  ++SA  +NG     L +Y 
Sbjct: 67  PKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYY 126

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M   GF+P  F + SV+  C ++   E G   H  ++KI ++ N +VG ++L  YAK  
Sbjct: 127 RMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCR 186

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +  A + F  +   +   + AM+GG A      EA  +   ML   I +D  +  + L 
Sbjct: 187 CIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLG 246

Query: 255 GCSL-------------VADFDI-GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            CS              V   D+ G+Q+H L I+   E  + + N+L+DMY K+  MD A
Sbjct: 247 VCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSA 306

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M +  V+SWN +  G+ +     +      +    G  P+ +T+  +L  C K 
Sbjct: 307 EMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKS 366

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            D++ G Q                                   +FD +S  ++++WN +L
Sbjct: 367 GDIEAGRQ-----------------------------------MFDGMSSPSLSSWNTIL 391

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N    + +K F  +    V  +  T   ++ +       +   Q+H    K  F 
Sbjct: 392 SGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFR 451

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +  Y+ S LI  Y   G+++ +    +    LD+  W +MM+ L     + EA T F  +
Sbjct: 452 TDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM 511

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            E G  P ++   T+L+ CA + +  + + +H  + + G+  + +V SA+ID Y+KCGD+
Sbjct: 512 REKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDV 571

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             AR  FD     N  + +N +I  YA +G   EA+ +++ M  +  +P   TFV+V++A
Sbjct: 572 DAARWVFDMMLGKN-TVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTA 630

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLVD G  +F SM  ++G++P  D Y C++D L R G L +A+ +I+ MP +  P 
Sbjct: 631 CSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPI 690

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++  LLS CR++ +  L   A+E+L  L P+N A +VLL+
Sbjct: 691 IWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLA 730


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 201/702 (28%), Positives = 354/702 (50%), Gaps = 37/702 (5%)

Query: 66   VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            VHG+ VK+GF  D+F+   L+ +Y K G  G    +FD+M ER+ V W +++ A ++N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 126  FDMGLKMYVDMKTNGFMPN----EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             D  L+ +     +GF P+       +G V    VS         +  +A+K+     PF
Sbjct: 799  QDEALRFFSAFHRSGFFPDFSNLHCVIGGV-NSDVSNNRKRHAEQVKAYAMKMF----PF 853

Query: 182  VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
               S  N +A                      WN  +  + H G    A++   ++L   
Sbjct: 854  DQGS--NIFA----------------------WNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 242  ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            I  D  T +  L       D D+G QIH L+I+S     + + N+L++MY K+  +  A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 302  KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            K F    + D+ISWNT+   +++N    +    F   +  G +P+  T + +LR C    
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 362  D---LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +     LG Q+   A+ CG +++  V+++LI ++ + G ++ A  +       ++ +WN 
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 419  LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
            ++ GY  +      L+ F  + E G+ ++  T    ++      N +   QI    IK G
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG 1129

Query: 479  FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            F++  ++ S ++  Y+  G + N+ E      R D  +W  M+S  +  G    A++++H
Sbjct: 1130 FNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYH 1189

Query: 539  SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
             +  +G +PDEY   T++ + + + A ++ K IH  V+KL ++ + +V ++++D Y KCG
Sbjct: 1190 LMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCG 1249

Query: 599  DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
             ++ A   F +  +   V+ +N +++  A HG V EA+ +F  M+   +QP + TF+ V+
Sbjct: 1250 SVQDAYRVF-RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVL 1308

Query: 659  SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            SACSH GL  +    F +M   YG+ P  + Y CLVD L R G +++A++VI  MPF+ S
Sbjct: 1309 SACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKAS 1368

Query: 719  PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++YR+LL  CR  G+ E  +  ++KLL L P + +A+VLLS
Sbjct: 1369 ASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 311/686 (45%), Gaps = 46/686 (6%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            LG + H  IV  G   D +L NNLI MYSKCG      +VFD+ ++R+LV+W  I++A  
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688

Query: 122  QNGEFDM-----GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            Q  +        G +++  ++  GF      +  ++K+C+  G  +   ++H +A+KI  
Sbjct: 689  QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748

Query: 177  EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            E + FV  +++N Y K G V  A  +F  +   D   WN M+  Y    +  EAL     
Sbjct: 749  ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR---- 804

Query: 237  MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
                        F +A        DF            S + C I  VN+ +    K   
Sbjct: 805  ------------FFSAFHRSGFFPDF------------SNLHCVIGGVNSDVSNNRKRHA 840

Query: 297  MD---YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
                 YA K+F      ++ +WN     F            F   + S    + VT  I+
Sbjct: 841  EQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 354  LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            L       DLDLG Q+  L +   F     V++SL+ M+ + G V  A   F N    ++
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 414  TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ---MVGQI 470
             +WN ++S Y  N  + + + TF ++   G++ +  T   V+  C   +  +   +  Q+
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 471  HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            H   IK G  +  ++ ++LI  Y   G++D +    +G    D+ASW A+M   +    +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 531  HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             +A+  F  + E G   DE  L T + +   +   ++ K I  + IKLGFN +++V+S V
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 591  IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
            +D Y KCGD+  A   F +  +  D + + T+I  Y  +G    A+ ++  M+++ +QP 
Sbjct: 1141 LDMYIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPD 1199

Query: 651  QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKH 708
            + TF +++ A S    +++G  +  ++     +  S D +    LVDM  + G ++DA  
Sbjct: 1200 EYTFATLIKASSCLTALEQGKQIHANV---VKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256

Query: 709  VIEIMPFQPSPTVYRSLLSGCRIHGN 734
            V   M  +     + ++L G   HG+
Sbjct: 1257 VFRKMDVR-KVVFWNAMLLGLAQHGH 1281



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 213/434 (49%), Gaps = 7/434 (1%)

Query: 35   CSDSFLRK----DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
            C  + LR     D + L   LS +       LG Q+H  ++K  F   + + N+L+ MYS
Sbjct: 881  CFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYS 940

Query: 91   KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
            K G      + F    E +L+SW  ++S+  QN      +  + D+  +G  P++F + S
Sbjct: 941  KAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000

Query: 151  VMKVCVSMGASEF---GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
            V++ C +    E+   G  +H +A+K  I  + FV  ++++ Y+K G +  AE + +   
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 208  SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
              D+  WNA++ GY       +AL   S M   GI +D+ T   A++    + +   G+Q
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 268  IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
            I    I+      + + + ++DMYIK   M  A ++F  ++  D ++W T+  G+ EN +
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 328  PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                 S++H   +SG +P+  TF+ L++    L  L+ G Q+    +   +  +  V +S
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 388  LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
            L+ M+C+CG+V+ A+ VF  +  + +  WN +L G   +    + L  F  +  +G++ +
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 448  GCTFFYVVETCCRS 461
              TF  V+  C  S
Sbjct: 1301 KVTFIGVLSACSHS 1314



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 143/359 (39%), Gaps = 46/359 (12%)

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R    + DL LG +     +  G L +  +T++LI M+ +CG++  A  VFD  S +++ 
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 415 TWNELLSGYC--FNCCDADVL---KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           TWN +L+ Y    +    +VL   + F  + E G  +   T   +++ C  S   Q+   
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +HG  +K GF    ++  +L+  Y  +G +  +    +     D   W  M+ A V    
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTIL---NSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
             EA+  F +   +G  PD   L  ++   NS  +    +  + +  + +K+        
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKM-------- 850

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
                               FDQ  N   +  +N  +  + H G +  A++ F  +  + 
Sbjct: 851 ------------------FPFDQGSN---IFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 647 LQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           +     T V ++SA      +D G     L+ KS        P       L++M S+ G
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-----SFAPVVPVSNSLMNMYSKAG 943



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%)

Query: 38   SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
            S ++ D    A  +  S  L +   G Q+H ++VKL ++ D F+  +L+ MY KCG    
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD 1253

Query: 98   GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              RVF +M  R +V W  ++    Q+G  D  L ++  M++NG  P++     V+  C  
Sbjct: 1254 AYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH 1313

Query: 158  MG 159
             G
Sbjct: 1314 SG 1315


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 201/701 (28%), Positives = 353/701 (50%), Gaps = 35/701 (4%)

Query: 66   VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            VHG+ VK+GF  D+F+   L+ +Y K G  G    +FD+M ER+ V W +++ A ++N  
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 126  FDMGLKMYVDMKTNGFMP---NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
             D  L+ +     +GF P   N   V   +   VS         +  +A+K+     PF 
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMF----PFD 854

Query: 183  GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              S  N +A                      WN  +  + H G    A++   ++L   I
Sbjct: 855  QGS--NIFA----------------------WNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              D  T +  L       D D+G QIH L+I+S     + + N+L++MY K+  +  A K
Sbjct: 891  GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950

Query: 303  VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
             F    + D+ISWNT+   +++N    +    F   +  G +P+  T + +LR C    +
Sbjct: 951  TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE 1010

Query: 363  ---LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                 LG Q+   A+ CG +++  V+++LI ++ + G ++ A  +       ++ +WN +
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAI 1070

Query: 420  LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
            + GY  +      L+ F  + E G+ ++  T    ++      N +   QI    IK GF
Sbjct: 1071 MFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGF 1130

Query: 480  SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            ++  ++ S ++  Y+  G + N+ E      R D  +W  M+S  +  G    A++++H 
Sbjct: 1131 NNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHL 1190

Query: 540  LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            +  +G +PDEY   T++ + + + A ++ K IH  V+KL ++ + +V ++++D Y KCG 
Sbjct: 1191 MRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGS 1250

Query: 600  IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            ++ A   F +  +   V+ +N +++  A HG V EA+ +F  M+   +QP + TF+ V+S
Sbjct: 1251 VQDAYRVF-RKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLS 1309

Query: 660  ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
            ACSH GL  +    F +M   YG+ P  + Y CLVD L R G +++A++VI  MPF+ S 
Sbjct: 1310 ACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASA 1369

Query: 720  TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++YR+LL  CR  G+ E  +  ++KLL L P + +A+VLLS
Sbjct: 1370 SMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLS 1410



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 180/686 (26%), Positives = 311/686 (45%), Gaps = 46/686 (6%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            LG + H  IV  G   D +L NNLI MYSKCG      +VFD+ ++R+LV+W  I++A  
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688

Query: 122  QNGEFDM-----GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            Q  +        G +++  ++  GF      +  ++K+C+  G  +   ++H +A+KI  
Sbjct: 689  QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748

Query: 177  EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            E + FV  +++N Y K G V  A  +F  +   D   WN M+  Y    +  EAL     
Sbjct: 749  ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALR---- 804

Query: 237  MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
                        F +A        DF            S + C I  VN+ +    K   
Sbjct: 805  ------------FFSAFHRSGFXPDF------------SNLHCVIGGVNSDVSNNRKRHA 840

Query: 297  MD---YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
                 YA K+F      ++ +WN     F            F   + S    + VT  I+
Sbjct: 841  EQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900

Query: 354  LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            L       DLDLG Q+  L +   F     V++SL+ M+ + G V  A   F N    ++
Sbjct: 901  LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960

Query: 414  TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ---MVGQI 470
             +WN ++S Y  N  + + + TF ++   G++ +  T   V+  C   +  +   +  Q+
Sbjct: 961  ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQV 1020

Query: 471  HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            H   IK G  +  ++ ++LI  Y   G++D +    +G    D+ASW A+M   +    +
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080

Query: 531  HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             +A+  F  + E G   DE  L T + +   +   ++ K I  + IKLGFN +++V+S V
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGV 1140

Query: 591  IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
            +D Y KCGD+  A   F +  +  D + + T+I  Y  +G    A+ ++  M+++ +QP 
Sbjct: 1141 LDMYIKCGDMPNALELFGE-ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPD 1199

Query: 651  QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKH 708
            + TF +++ A S    +++G  +  ++     +  S D +    LVDM  + G ++DA  
Sbjct: 1200 EYTFATLIKASSCLTALEQGKQIHANV---VKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256

Query: 709  VIEIMPFQPSPTVYRSLLSGCRIHGN 734
            V   M  +     + ++L G   HG+
Sbjct: 1257 VFRKMDVR-KVVFWNAMLLGLAQHGH 1281



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 213/434 (49%), Gaps = 7/434 (1%)

Query: 35   CSDSFLRK----DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
            C  + LR     D + L   LS +       LG Q+H  ++K  F   + + N+L+ MYS
Sbjct: 881  CFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYS 940

Query: 91   KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
            K G      + F    E +L+SW  ++S+  QN      +  + D+  +G  P++F + S
Sbjct: 941  KAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLAS 1000

Query: 151  VMKVCVSMGASEF---GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
            V++ C +    E+   G  +H +A+K  I  + FV  ++++ Y+K G +  AE + +   
Sbjct: 1001 VLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 208  SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
              D+  WNA++ GY       +AL   S M   GI +D+ T   A++    + +   G+Q
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 268  IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
            I    I+      + + + ++DMYIK   M  A ++F  ++  D ++W T+  G+ EN +
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 328  PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                 S++H   +SG +P+  TF+ L++    L  L+ G Q+    +   +  +  V +S
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 388  LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
            L+ M+C+CG+V+ A+ VF  +  + +  WN +L G   +    + L  F  +  +G++ +
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 448  GCTFFYVVETCCRS 461
              TF  V+  C  S
Sbjct: 1301 KVTFIGVLSACSHS 1314



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 143/359 (39%), Gaps = 46/359 (12%)

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R    + DL LG +     +  G L +  +T++LI M+ +CG++  A  VFD  S +++ 
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 415 TWNELLSGYC--FNCCDADVL---KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           TWN +L+ Y    +    +VL   + F  + E G  +   T   +++ C  S   Q+   
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +HG  +K GF    ++  +L+  Y  +G +  +    +     D   W  M+ A V    
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTIL---NSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
             EA+  F +   +G  PD   L  ++   NS  +    +  + +  + +K+        
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKM-------- 850

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
                               FDQ  N   +  +N  +  + H G +  A++ F  +  + 
Sbjct: 851 ------------------FPFDQGSN---IFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 647 LQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           +     T V ++SA      +D G     L+ KS        P       L++M S+ G
Sbjct: 890 IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-----SFAPVVPVSNSLMNMYSKAG 943



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%)

Query: 38   SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
            S ++ D    A  +  S  L +   G Q+H ++VKL ++ D F+  +L+ MY KCG    
Sbjct: 1194 SGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQD 1253

Query: 98   GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              RVF +M  R +V W  ++    Q+G  D  L ++  M++NG  P++     V+  C  
Sbjct: 1254 AYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH 1313

Query: 158  MG 159
             G
Sbjct: 1314 SG 1315


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 201/711 (28%), Positives = 366/711 (51%), Gaps = 4/711 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS  E+  SR+ G  +H  ++K G   ++ L NNL+++Y K        ++FDEM+ R +
Sbjct: 31  LSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +WT+++SA  ++ EF   L ++ +M  +G  PNEF   SV++ C  +    +G  +H  
Sbjct: 90  FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K   E N  VG S+ + Y+K G    A  +F S+ + D   W  MI          EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L   S M+  G+  +++TF+  L G S     + G+ IH  II   +  ++ +  +L+D 
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y + S M+ A +V     ++DV  W ++  GF  N    +    F +    G +PN+ T+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM-AHSVFDNVS 409
           S +L  C  +  LD G Q+    +  GF D  +V ++L+ M+ +C A E+ A  VF  + 
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             N+ +W  L+ G   +    D       + +  VE N  T   V+  C +  + + V +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH  +++        + +SL+ +Y +  ++D ++      +R D  ++ ++++     G 
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           +  A+++ + +   G + D+  L   +++ A +GA +  K +H + +K GF+    V ++
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KCG ++ A+  F++   + DV+ +N L+   A +G +S A+  F++M++   +P
Sbjct: 569 LVDMYSKCGSLEDAKKVFEE-IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TF+ ++SACS+  L D G   F+ M   Y ++P  + Y  LV +L R G LE+A  V
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +E M  +P+  ++++LL  CR  GN  LGE  + K L L P + A ++LL+
Sbjct: 688 VETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLA 738



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 62/125 (49%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + L   +S S NL +   G  +H + VK GF+    + N+L+ MYSKCG      
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+E+A  ++VSW  +VS    NG     L  + +M+     P+      ++  C +  
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643

Query: 160 ASEFG 164
            ++ G
Sbjct: 644 LTDLG 648


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 182/576 (31%), Positives = 312/576 (54%), Gaps = 1/576 (0%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y+  G+V  A ++F S+ +  V  WNA+I GYA  G+  EA  +   M+ EG+  
Sbjct: 97  TLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEP 156

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
              TF++ L  CS  A  + G+++H  ++ +       I  AL+ MY+K   MD A +VF
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +  +DV ++N + GG++++ +  +   LF++    G +PN ++F  +L  C     L 
Sbjct: 217 DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALA 276

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +    ++ G +D+  V +SLI M+  CG++E A  VFDN+  +++ +W  ++ GY 
Sbjct: 277 WGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYA 336

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    D    F  + E G++ +  T+ +++  C  S N     +IH  +   GF +   
Sbjct: 337 ENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G + ++ +  +   R D+ SW AM+ A V  G+  EA   FH +  + 
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN 456

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD      +LN+C  +GA      I+   IK    + V + +A+I   AK G ++ AR
Sbjct: 457 IEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERAR 516

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD +    DVI +N +I  Y+ HG   EA+ +FD+M     +P+  TFV V+SACS  
Sbjct: 517 YIFD-TMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRA 575

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           G VD+G   F  +    G+ P+   YGC+VD+L R G L++A+ +I+ MP +P+ +++ S
Sbjct: 576 GFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSS 635

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL  CRIHGN ++ E A+E+ L++ P + A +V LS
Sbjct: 636 LLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLS 671



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 258/506 (50%), Gaps = 3/506 (0%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G  +D  T++   Q C+ + D  +G+Q+   II+   + +I  +N LI +Y     +  A
Sbjct: 52  GNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEA 111

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F+ + +K V++WN L  G+++  +  +  +LF + +  G  P+ +TF  +L  C   
Sbjct: 112 RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSP 171

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G ++    +  GF+ +  + ++L+ M+ + G+++ A  VFD +  ++++T+N ++
Sbjct: 172 AGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMV 231

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY  +       + F  + + G++ N  +F  +++ C   E       +H   +  G  
Sbjct: 232 GGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLV 291

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SLI+ Y   G ++ +    +  +  D+ SW  M+      G+  +A  +F ++
Sbjct: 292 DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATM 351

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            E G +PD      I+N+CA        + IH  V   GF T++ V++A++  YAKCG I
Sbjct: 352 QEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAI 411

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K AR  FD +    DV+ ++ +I AY  +G  +EA E F  MK +N++P   T++++++A
Sbjct: 412 KDARQVFD-AMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNA 470

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           C H G +D G  ++        +   P     L+ M +++G +E A+++ + M  +   T
Sbjct: 471 CGHLGALDVGMEIYTQAIKADLVSHVP-LGNALIIMNAKHGSVERARYIFDTMVRRDVIT 529

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLL 746
            + +++ G  +HGN     +  +++L
Sbjct: 530 -WNAMIGGYSLHGNAREALYLFDRML 554



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 156/699 (22%), Positives = 311/699 (44%), Gaps = 9/699 (1%)

Query: 14  PSCHFHATRKRIHRLCGNN--QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV 71
           PS  F +T  R  R+  N+  Q   +     D     K       L+   LG QV  HI+
Sbjct: 27  PSARFRSTFTR--RVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHII 84

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           + G   +I+  N LI +YS CG      ++FD +  + +V+W  +++   Q G       
Sbjct: 85  QGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFA 144

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           ++  M   G  P+     SV+  C S     +G  +H   +      +  +G ++++ Y 
Sbjct: 145 LFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYV 204

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G +  A +VF  +   DV  +N M+GGYA  G   +A  +   M   G+  +K +F++
Sbjct: 205 KGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLS 264

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L GC        G+ +H   + + +   I +  +LI MY     ++ A +VF+ M  +D
Sbjct: 265 ILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRD 324

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V+SW  +  G++EN N      LF      G +P+ +T+  ++  C    +L+   ++  
Sbjct: 325 VVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS 384

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
                GF  +  V+++L++M+ +CGA++ A  VFD +  +++ +W+ ++  Y  N    +
Sbjct: 385 QVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTE 444

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
             +TF  +  S +E +G T+  ++  C       +  +I+   IK    S   + ++LI 
Sbjct: 445 AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALII 504

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
                G ++ +    +   R D+ +W AM+      G+  EA+ +F  +++   +P+   
Sbjct: 505 MNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVT 564

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              +L++C+  G     +    ++++  G    V +   ++D   + G++  A +     
Sbjct: 565 FVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSM 624

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMSACSHKGLVDK 669
                  ++++L++A   HG +  A    ++  +  + P   A +V +    +  G+ + 
Sbjct: 625 PVKPTSSIWSSLLVACRIHGNLDVAERAAERCLM--IDPYDGAVYVQLSHMYAAAGMWEN 682

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
              + K M+S+ G++    C    V        +ED  H
Sbjct: 683 VAKVRKVMESR-GIRKEQGCTWIEVAGKVHTFVVEDRSH 720


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 214/742 (28%), Positives = 345/742 (46%), Gaps = 75/742 (10%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--------------- 102
            SR      H  ++  G   D FL N L+ +YS  G     LR F               
Sbjct: 24  PSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAI 83

Query: 103 ----------------DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
                             M +RN VSW  +++A  ++G     L+MY  M   G  P  F
Sbjct: 84  SAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNF 143

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            + SV+  C ++ A + G   H  A+K+ ++ + FV   +L  Y K G VA A R+F  +
Sbjct: 144 TLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM 203

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV--ADFDI 264
            S +   + AM+GG A  G   +AL + + M   GI +D     + L  C+     D+++
Sbjct: 204 PSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNV 263

Query: 265 GR------QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
            R       IH L++R        + N+L+D+Y K   MD A KVFE ++   ++SWN L
Sbjct: 264 ARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNIL 323

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G+ +     +   +      SG  PN VT+S +L  C K  D                
Sbjct: 324 ITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARD---------------- 367

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                              V  A ++FD +   ++TTWN LLSGY       + +  F  
Sbjct: 368 -------------------VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRR 408

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +    V+ +  T   ++ +C R  N ++  Q+H A ++    +  ++ S LI  Y   GQ
Sbjct: 409 MQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQ 468

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +  +    N     D+  W +M+S L     + EA      + E G  P E    +++N 
Sbjct: 469 VGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINL 528

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA + +  + + +H  V+K G++  VYV  ++ID YAK G++  AR+ F+     N ++ 
Sbjct: 529 CARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKN-LVA 587

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +N +I  YA +G   +A+E+F+ M     +P   TF++V++ CSH GLVD+    F SM+
Sbjct: 588 WNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSME 647

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           S YG+ P  + Y CL+D L+R     + + VI  MP++  P ++  LL+ C +H N ELG
Sbjct: 648 SNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELG 707

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
           E++++ L  L PKN + +VLLS
Sbjct: 708 EFSAKHLFRLDPKNPSPYVLLS 729



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 113/218 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L +  LG QVH   V+L   ND+F+ + LI +YSKCG  G  L
Sbjct: 414 VQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIAL 473

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ M ER++V W  ++S    +   +        M+ NG  P E +  S++ +C  + 
Sbjct: 474 IIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLS 533

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  +H   LK   ++N +VGCS+++ YAK G++  A   F  +   ++  WN MI 
Sbjct: 534 SIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIH 593

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GYA  G+G +A+ +   ML      D  TFI  L GCS
Sbjct: 594 GYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCS 631



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 40  LRKDPIFLAKS-----LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +R++ +F  +S     ++L   L S   G Q+H  ++K G+  ++++  +LI MY+K G 
Sbjct: 510 MRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGN 569

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                  F+ M  +NLV+W  ++    QNG  +  ++++  M T    P+     +V+  
Sbjct: 570 MDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTG 629

Query: 155 CVSMG 159
           C   G
Sbjct: 630 CSHSG 634


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 201/719 (27%), Positives = 368/719 (51%), Gaps = 11/719 (1%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I  A ++S   +++S   G  +H  +++ GF +D+ +   ++ MY KCG       VF+ 
Sbjct: 205 ITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFER 264

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEF 163
           M   N VSW  IV+A  Q+G     L  +  M+   G  P++    +++  C S     F
Sbjct: 265 MPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTF 324

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H   L+   + +  VG  ++  Y+  G +  A   F ++   D   WN +I G+A 
Sbjct: 325 GELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQ 384

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  EA+++   ML EGIT DK+TFI+ + G + + +  I   +  L++ S VE  + +
Sbjct: 385 AGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKI---LSELMVESGVELDVFL 441

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           V+ALI+M+ +   +  A  +F+ M D+D++ W ++   + ++ +            L G 
Sbjct: 442 VSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGL 501

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             N  T    L  C  L  L  G  +   A+  GF     V ++LI M+ +CG +E A  
Sbjct: 502 MGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADR 561

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF     KN+ +WN + + Y       + L+ F  +   G++ +  +F  V+  C  +  
Sbjct: 562 VFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE 620

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   +IH  +++TG  S   + ++L+  Y     LD +    +  E  D+ SW AM++ 
Sbjct: 621 GR---KIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAG 677

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN--SCAAIGAYQRTKSIHPFVIKLGFN 581
               G + EA+ +F  +   G  PD+    T+LN  S ++  + ++ + +   +   G+ 
Sbjct: 678 KAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYE 737

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           T+  V +A++  + + G +  AR AF++     D   +N ++ A+A HG V +A+++F +
Sbjct: 738 TDTIVGNAIVSMFGRSGRLAEARRAFER-IRERDAASWNVIVTAHAQHGEVEQALKLFRR 796

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+  + +P   T VSV+SACSH GL+++G   F SM  ++G+  S + YGC+VD+L+R G
Sbjct: 797 MQQESSRPDSITLVSVLSACSHGGLIEEGYHHFTSMGREFGIAGSQEHYGCVVDLLARAG 856

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            L+ A+ ++  MP   S  ++ +LLS C++ G+++  +   E+++ L P+  AA+V+LS
Sbjct: 857 RLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVGERVMELDPRRPAAYVVLS 915



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 174/675 (25%), Positives = 328/675 (48%), Gaps = 17/675 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +    F  D  +QN  I MY KCG     + VF  +   + VSW  +++A  +
Sbjct: 21  GRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQVSWNSLLAAFAR 80

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+F    +++  MK  G  P+     +V+  C ++G    G  +H F L+  +E+N  V
Sbjct: 81  DGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMV 140

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++  Y K G V  A RVF  ++  DV  W +MI  Y       EAL +   M   G+
Sbjct: 141 GTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGV 200

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ T+  A+  C+ V     G+ IH  ++    E  + +  A+++MY K   ++ A +
Sbjct: 201 LPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDARE 260

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLL 361
           VFERM   + +SWN +    +++    +    F +  L G   P+ VTF  +L  C    
Sbjct: 261 VFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPA 320

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G  L    L CG+     V + ++ M+  CG ++ A + F  +  ++  +WN ++S
Sbjct: 321 TLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIIS 380

Query: 422 GYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           G+     CD + +  F  +   G+  +  TF  +++   R +  +++ ++   ++++G  
Sbjct: 381 GHAQAGFCD-EAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL---MVESGVE 436

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ S+LI  +  +G +  +    +  +  D+  W +++S+ V  G + +A+     +
Sbjct: 437 LDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLM 496

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G   +++ L T LN+CA++ A    K IH   I+ GF     V +A+I+ YAKCG +
Sbjct: 497 RLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCL 556

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A   F Q     +++ +NT+  AY       EA+++F +M+L  L+  + +FV+V++ 
Sbjct: 557 EEADRVFHQC--GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNG 614

Query: 661 CS--HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           CS   +G      LL   M+S + +  +      L++M + +  L++A  +   M F+  
Sbjct: 615 CSSASEGRKIHNILLETGMESDHIVSTA------LLNMYTASKSLDEASRIFSRMEFRDI 668

Query: 719 PTVYRSLLSGCRIHG 733
            + + ++++G   HG
Sbjct: 669 VS-WNAMIAGKAEHG 682



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/561 (24%), Positives = 278/561 (49%), Gaps = 6/561 (1%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++ +C    A   G  +H         ++  V  + ++ Y K G V  A  VF S+   
Sbjct: 7   ALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHP 66

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               WN+++  +A  G   +A  +   M  +G+  D+ TF+  L GCS + D   G+ +H
Sbjct: 67  SQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGKLLH 126

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G ++ + +E ++ +  +LI MY K   ++ A +VF+++A +DV+SW ++   + ++    
Sbjct: 127 GFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCV 186

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LFH+   SG  PN +T++  +  C  +  +  G  +    L  GF  +  V+ +++
Sbjct: 187 EALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNG 448
            M+ +CG++E A  VF+ + + N  +WN +++    + C  + L  F  +  + G+  + 
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGITPDK 306

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            TF  ++  C           +H  I++ G+ +   + + ++  Y + G++DN+  F + 
Sbjct: 307 VTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D  SW  ++S     G   EAV +F  ++  G  PD++   +I++  A +   Q  
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARM---QEA 423

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K +   +++ G   +V++ SA+I+ +++ G+++ AR  FD      D++++ ++I +Y  
Sbjct: 424 KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDD-MKDRDIVMWTSIISSYVQ 482

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG   +A+     M+L  L  +  T V+ ++AC+    + +G L+  +   + G   SP 
Sbjct: 483 HGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLI-HAHAIERGFAASPA 541

Query: 689 CYGCLVDMLSRNGYLEDAKHV 709
               L++M ++ G LE+A  V
Sbjct: 542 VGNALINMYAKCGCLEEADRV 562



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 231/493 (46%), Gaps = 7/493 (1%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           ++ TF+  L  C+  +    GR +H  +  SE      + NA I MY K   ++ A  VF
Sbjct: 1   ERGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVF 60

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +     +SWN+L   F+ +    Q   +F +  L G  P+ +TF  +L  C  + DL 
Sbjct: 61  QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLS 120

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  L    L  G      V +SLI M+ +CG VE A  VFD ++ +++ +W  ++  Y 
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYV 180

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L+ F  +  SGV  N  T+   +  C   E+      IH  +++ GF S   
Sbjct: 181 QHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV 240

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEA 543
           +  +++  Y   G L+++ E        +  SW A+++A    G   EA+  F  + ++ 
Sbjct: 241 VSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQG 300

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD+    TILN+C++       + +H  +++ G++T + V + ++  Y+ CG I  A
Sbjct: 301 GITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AF  +    D I +NT+I  +A  G   EA+ +F +M    + P + TF+S++   + 
Sbjct: 361 -AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR 419

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
                +   +   +  + G++        L++M SR G + +A+ + + M       ++ 
Sbjct: 420 M----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMK-DRDIVMWT 474

Query: 724 SLLSGCRIHGNKE 736
           S++S    HG+ +
Sbjct: 475 SIISSYVQHGSSD 487


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 188/673 (27%), Positives = 344/673 (51%), Gaps = 37/673 (5%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G     +++   +K  G + N    G +++ C  +   E G  +H    ++ +  + ++G
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S++NFY+K GDVA+ E+VF  ++  DV  W++MI  YA   +  +A +    M    I 
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            ++ TF++ L+ C+  +  +  R+IH ++  S +E  +++  ALI MY K   +  A ++
Sbjct: 177 PNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEI 236

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F++M +++V+SW  +    ++++   +   L+ K + +G  PN VTF  LL  C     L
Sbjct: 237 FQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G ++       G   +  V ++LI M+C+C  ++ A   FD +S +++ +W+ +++GY
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356

Query: 424 CFNCCD-----ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
             +         +V +    +   GV  N  TF  +++ C      +   QIH  I K G
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416

Query: 479 FSS--------------CGYI-----------------CSSLIKSYVNFGQLDNSFEFSN 507
           F S              CG I                  +SL+  Y+  G L ++ +  +
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFS 476

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                ++ SW  M++     G   +   +  S+   G +PD   + +IL +C A+ A +R
Sbjct: 477 EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K +H   +KLG  ++  VA+++I  Y+KCG++  AR  FD+  ++ D + +N ++  Y 
Sbjct: 537 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDK-ISNRDTVAWNAMLAGYG 595

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG+  EA+++F +M    + P++ TF +V+SAC   GLV +G  +F+ M   + M+P  
Sbjct: 596 QHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGK 655

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
             YGC+VD+L R G L++A+  I+ MP +P  +V+ +LL  C+ H N +L EWA+  +L 
Sbjct: 656 QHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILR 715

Query: 748 LLPKNDAAHVLLS 760
           L P N + +V LS
Sbjct: 716 LEPSNASVYVTLS 728



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 162/660 (24%), Positives = 290/660 (43%), Gaps = 48/660 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  + +LG   DI+L N+LI  YSK G      +VF  M  R++V+W+ +++A   
Sbjct: 97  GKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAG 156

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N         +  MK     PN     S++K C +    E    IH       +E +  V
Sbjct: 157 NNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAV 216

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y+K G+++ A  +F  +   +V  W A+I   A      EA  +   ML  GI
Sbjct: 217 ATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGI 276

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           + +  TF++ L  C+     + GR+IH  I    +E  + + NALI MY K + +  A +
Sbjct: 277 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARE 336

Query: 303 VFERMADKDVISWNTLFGGFSEN-----KNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            F+RM+ +DVISW+ +  G++++     ++  +   L  +    G  PN VTF  +L+ C
Sbjct: 337 TFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKAC 396

Query: 358 GKLLDLDLGLQLQCLALHCGF-----------------------------LDEENVT--S 386
                L+ G Q+       GF                             ++ +NV   +
Sbjct: 397 SVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWA 456

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           SL+ M+ +CG +  A  VF  +S +N+ +WN +++GY  +   A V +   ++   G + 
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQP 516

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   ++E C      +    +H   +K G  S   + +SLI  Y   G++  +    
Sbjct: 517 DRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVF 576

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +     D  +W AM++     G   EAV +F  +++    P+E     ++++C   G  Q
Sbjct: 577 DKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQ 636

Query: 567 RTKSI-----HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
             + I       F +K G   + Y    ++D   + G ++ A     +     D+ V++ 
Sbjct: 637 EGREIFRIMQEDFRMKPG--KQHY--GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHA 692

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           L+ A   H  V  A   +    +  L+PS A+ +V++ +  +  G  D    + K MD +
Sbjct: 693 LLGACKSHDNVQLAE--WAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDK 750



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 103/196 (52%), Gaps = 2/196 (1%)

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G  +  L   G   EA+ +   + + G   +    G I+  CA +  ++  K +H  + +
Sbjct: 47  GGEVWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDE 106

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           LG   ++Y+ +++I+ Y+K GD+      F +     DV+ ++++I AYA +   ++A +
Sbjct: 107 LGLAIDIYLGNSLINFYSKFGDVASVEQVF-RRMTLRDVVTWSSMIAAYAGNNHPAKAFD 165

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F++MK AN++P++ TF+S++ AC++  +++K   +   + +  GM+        L+ M 
Sbjct: 166 TFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKAS-GMETDVAVATALITMY 224

Query: 698 SRNGYLEDAKHVIEIM 713
           S+ G +  A  + + M
Sbjct: 225 SKCGEISLACEIFQKM 240


>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
 gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
          Length = 691

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 205/694 (29%), Positives = 356/694 (51%), Gaps = 9/694 (1%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           + P  +  +L+     +S + G  +H H++K G        N+L++ YS+C        V
Sbjct: 2   RTPGTIGSALARFGASRSLLAGAHLHSHLLKSGLLAS--YSNHLLSFYSRCRLPSAARAV 59

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FDE+ +   VSW+ +V+A   NG     L  +  M+  G   NE+A+  V+K    +   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDV--- 116

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGG 220
            FG  +H  A+  R+ ++ FV  +++  Y   G V  A+R+F     + +   WN MI  
Sbjct: 117 RFGAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISA 176

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y       +A+ V   M++ G   +++ F   +  C+   D++ GRQ+HG+++R+  +  
Sbjct: 177 YVKNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKD 236

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +   NAL+DMY K   ++ A  VFE++   DV+SWN L  G   + +  +   L  +   
Sbjct: 237 VFTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKP 296

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  PN  T S +L+ C      +LG Q+    +      +E V   L+ M+ + G ++ 
Sbjct: 297 LGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDD 356

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE--VNGCTFFYVVETC 458
           A  VFD +  +++  WN L+SG   +    +VL  F  + + G++  VN  T   V+++ 
Sbjct: 357 ARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKST 416

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
              E      Q+H    K G  S  ++ + LI SY   G+LD + +    +   D+ S  
Sbjct: 417 ASLEAICHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISST 476

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +MM+AL    H  +A+ +F  ++  G +PD ++L ++LN+CA++ AY++ K +H  +IK 
Sbjct: 477 SMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKR 536

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
            F ++V+  +A++  YAKCG I+ A MAF        V+ ++ +I   A HG    A+E+
Sbjct: 537 QFTSDVFAGNALVYTYAKCGSIEDADMAF-SGLPEKGVVSWSAMIGGLAQHGHGKRALEL 595

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F +M    + P+  T  SV+SAC+H GLVD     F+SM   +G+  + + Y C++D+L 
Sbjct: 596 FHRMLDEGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILG 655

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
           R G L+DA  ++  MPFQ +  V+ +LL   R++
Sbjct: 656 RAGKLKDAMELVNNMPFQANAAVWGALLGASRLN 689



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 84/186 (45%), Gaps = 8/186 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D   L+  L+   +L +   G QVH H++K  FT+D+F  N L+  Y+KCG      
Sbjct: 503 LEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYTYAKCGSIEDAD 562

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + E+ +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C   G
Sbjct: 563 MAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLDEGVAPNNITLTSVLSACNHAG 622

Query: 160 ----ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
               A ++  S+   F +  R E++      +L    KL D  A E V       +   W
Sbjct: 623 LVDDAKKYFESMKEAFGID-RTEEHYACMIDILGRAGKLKD--AMELVNNMPFQANAAVW 679

Query: 215 NAMIGG 220
            A++G 
Sbjct: 680 GALLGA 685


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 206/716 (28%), Positives = 364/716 (50%), Gaps = 9/716 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFT--NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           L L    K+   G QVH H V  G    +D FL   L+ MY KCG       +FD M+ R
Sbjct: 65  LDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSR 124

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMK---TNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            + SW  ++ A + +G     L +Y  M+    +G  P+   + SV+K     G    G 
Sbjct: 125 TVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGC 184

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGYAHC 224
            +H  A+K  ++++ FV  +++  YAK G + +A RVF  +    DV  WN+MI G    
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQN 244

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL++   M    ++M+ YT +  LQ C+ +A  ++GR++H  +++S  E +I   
Sbjct: 245 GMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ-C 303

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NAL+ MY K   +D A +VF  + +KD ISWN++   + +N    +      + +  G +
Sbjct: 304 NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQ 363

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+H     L    G L  L  G ++   A+      +  V ++L+ M+ +C  +E +  V
Sbjct: 364 PDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHV 423

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +  K+  +W  +++ Y  +    + L+ F    + G++V+      ++E C   E  
Sbjct: 424 FDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETI 483

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
            +  Q+H   I+ G      + + +I  Y   G++ +S +     E+ D+ +W +M++  
Sbjct: 484 LLAKQLHCYAIRNGLLDL-VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCY 542

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
            + G  +EA+ +F  +     +PD   L +IL +   + +  + K +H F+I+  F+ E 
Sbjct: 543 ANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEE 602

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            + S+++D Y+ CG + GA   F+ +    D++++  +I A   HG   +A+++F +M  
Sbjct: 603 AIVSSLVDMYSGCGSLSGALKVFN-AVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQ 661

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             + P   +F++++ ACSH  LV++G      M S Y ++P  + Y C+VD+L R+G  E
Sbjct: 662 TGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTE 721

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A   I+ MP +P   V+ SLL  CR+H N EL   A+ +LL L P N   +VL+S
Sbjct: 722 EAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVS 777



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/324 (21%), Positives = 158/324 (48%), Gaps = 5/324 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ DP+ +   L     L++ +L  Q+H + ++ G   D+ ++N +I +Y +CG     L
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSL 521

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F+ + ++++V+WT +++    +G  +  L ++ +M++    P+  A+ S++     + 
Sbjct: 522 KMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLS 581

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  +H F ++        +  S+++ Y+  G ++ A +VF ++   D+  W AMI 
Sbjct: 582 SLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMIN 641

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
                G+G +A+++   ML  G+T D  +F+  L  CS     + G+    +++ +  +E
Sbjct: 642 ATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLE 701

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHK 337
                   ++D+  +S   + A++  + M  K   + W +L G    +KN        ++
Sbjct: 702 PWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANR 761

Query: 338 FI-LSGSRP-NHVTFSILLRQCGK 359
            + L    P N+V  S +  + GK
Sbjct: 762 LLELEPDNPGNYVLVSNVFAEMGK 785


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/724 (28%), Positives = 370/724 (51%), Gaps = 17/724 (2%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L + L  + + +    G ++H  IV LG   +  L N+L+ +Y KC   G    VF 
Sbjct: 29  PAHLVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFS 86

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +  R+  SWT I++A  ++G+    + M+  M+  G   +     +V+K C  +G    
Sbjct: 87  RLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQ 146

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G SIH + ++  ++    +   +L+ Y   G VA+A  +F  +  D V  WNA I   A 
Sbjct: 147 GRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDLVS-WNAAIAANAQ 205

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G    AL +   M  EG+   + T + AL  C+ +      + IH ++  S +E ++ +
Sbjct: 206 SGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTLVV 262

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             AL   Y +   +  A +VF+R A++DV+SWN + G ++++ +  + A LF + +  G 
Sbjct: 263 STALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGI 322

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+ VT       C     L  G  +   AL  G   +  + ++L+ M+ RCG+ E A  
Sbjct: 323 SPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARH 379

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F  +   N  +WN +++G          ++ F  +   G+     T+  ++E    +  
Sbjct: 380 LFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438

Query: 464 QQMV----GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGA--ERLDMAS 516
           +        ++H  I+  G++S   I ++++K Y + G +D +   F  GA  +R D+ S
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W A++S+L   GH   A+  F  +   G  P++     +L++CA   A    + +H  + 
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLR 558

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G  + ++VA+A+   Y +CG ++ AR  F++     DV+++N +I AY+ +GL  EA+
Sbjct: 559 HSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEAL 618

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           ++F +M+    +P + +FVSV+SACSH GL D+G  +F+SM   YG+ PS D Y C VD+
Sbjct: 619 KLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDV 678

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L R G+L DA+ +I  M  +P+  V+++LL  CR + + + G  A+  +  L P +++A+
Sbjct: 679 LGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAY 738

Query: 757 VLLS 760
           V+LS
Sbjct: 739 VVLS 742


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 196/665 (29%), Positives = 354/665 (53%), Gaps = 9/665 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFDEM +R   +W  ++ A + NGE    L +Y +M+  G   + ++   ++K C  + 
Sbjct: 117 KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLR 176

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVGCWNAMI 218
               G  +HC  +K+      F+  ++++ YAK   ++AA+R+F  S    D   WN+++
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y+  G   E L +   M   G   + YT ++AL  C   +   +G++IH  +++S   
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + + NALI MY +   M  A ++   M + DV++WN+L  G+ +N    +    F   
Sbjct: 297 FEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDM 356

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           I +G +P+ V+ + ++   G+L +L  G++L    +  G+     V ++LI M+ +C   
Sbjct: 357 IAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLT 416

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
                 F  +  K++ +W  +++GY  N C  + L+ F ++ +  +E++      ++  C
Sbjct: 417 CYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRAC 476

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDMA 515
              ++  +V +IH  I++ G      I + L+  Y    N G     FE   G    D+ 
Sbjct: 477 SVLKSMLIVKEIHCHILRKGLIDT-VIQNELVDVYGKCRNMGYASRVFESIKGK---DVV 532

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW +M+S+    G+ +EAV +F  + E G   D   L  IL++ A++ A ++ + IH ++
Sbjct: 533 SWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYL 592

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           ++ GF  E  +A AV+D YA CGD++ A+  FD+      ++ Y ++I AY  HG    +
Sbjct: 593 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDR-IERKGLLQYTSMINAYGMHGCGKAS 651

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +E+F+KM+  N+ P   +F++++ ACSH GL+D+G    K M+ +Y ++P P+ Y CLVD
Sbjct: 652 VELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVD 711

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           ML R   + +A   +++M  +P+  V+ +LL+ CR H  KE+GE A+++LL L PKN   
Sbjct: 712 MLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGN 771

Query: 756 HVLLS 760
            VL+S
Sbjct: 772 LVLVS 776



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 236/502 (47%), Gaps = 2/502 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
           GT++H  +VKLGF +  F+ N L++MY+K  +     R+FD   E+ + V W  I+S+  
Sbjct: 181 GTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYS 240

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +G+    L+++ +M+  G   N + + S +  C     ++ G  IH   LK       +
Sbjct: 241 TSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVY 300

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++  YA+ G +  A R+   +++ DV  WN++I GY       EAL     M+  G
Sbjct: 301 VCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAG 360

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D+ +  + +     +++   G ++H  +I+   + ++ + N LIDMY K +   Y  
Sbjct: 361 HKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMG 420

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           + F  M +KD+ISW T+  G++ N    +   LF          + +    +LR C  L 
Sbjct: 421 RAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLK 480

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + +  ++ C  L  G +D   + + L+ ++ +C  +  A  VF+++  K++ +W  ++S
Sbjct: 481 SMLIVKEIHCHILRKGLIDTV-IQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMIS 539

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               N  + + ++ F  + E+G+  +      ++         +   +IHG +++ GF  
Sbjct: 540 SSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCL 599

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            G I  +++  Y   G L ++    +  ER  +  + +M++A    G    +V +F+ + 
Sbjct: 600 EGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMR 659

Query: 542 EAGEKPDEYILGTILNSCAAIG 563
                PD      +L +C+  G
Sbjct: 660 HENVSPDHISFLALLYACSHAG 681



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 196/412 (47%), Gaps = 1/412 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +  +L+  E      LG ++H  ++K   + ++++ N LIAMY++CG      R+   M 
Sbjct: 267 IVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMN 326

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             ++V+W  ++   +QN  +   L+ + DM   G  P+E ++ SV+     +     G  
Sbjct: 327 NADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGME 386

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H + +K   + N  VG ++++ Y+K        R F  +   D+  W  +I GYA    
Sbjct: 387 LHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDC 446

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL +   +  + + +D+    + L+ CS++    I ++IH  I+R  +  ++ I N 
Sbjct: 447 HVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV-IQNE 505

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+D+Y K   M YA +VFE +  KDV+SW ++    + N N  +   LF +   +G   +
Sbjct: 506 LVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLAD 565

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            V    +L     L  L  G ++    L  GF  E ++  +++ M+  CG ++ A +VFD
Sbjct: 566 SVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFD 625

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +  K +  +  +++ Y  + C    ++ F  +    V  +  +F  ++  C
Sbjct: 626 RIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYAC 677



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 1/326 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + L   ++ S  L + + G ++H +++K G+ +++ + N LI MYSKC    +  R
Sbjct: 362 KPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGR 421

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F  M E++L+SWT I++    N      L+++ D+       +E  +GS+++ C  + +
Sbjct: 422 AFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKS 481

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
                 IHC  L+  +  +  +   +++ Y K  ++  A RVF SI   DV  W +MI  
Sbjct: 482 MLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISS 540

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   EA+ +   M   G+  D    +  L   + ++    GR+IHG ++R      
Sbjct: 541 SALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLE 600

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            SI  A++DMY     +  A  VF+R+  K ++ + ++   +  +     +  LF+K   
Sbjct: 601 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRH 660

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
               P+H++F  LL  C     LD G
Sbjct: 661 ENVSPDHISFLALLYACSHAGLLDEG 686



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/119 (20%), Positives = 58/119 (48%), Gaps = 1/119 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG++++ GF  +  +   ++ MY+ CG       VFD +  + L+ +T +++A   
Sbjct: 585 GREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGM 644

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS-IHCFALKIRIEKNP 180
           +G     ++++  M+     P+  +  +++  C   G  + G   +    L+ ++E  P
Sbjct: 645 HGCGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWP 703


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 206/713 (28%), Positives = 376/713 (52%), Gaps = 25/713 (3%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  +V+    +  DI + N  I MY KCG     ++ F  M  R++VSWT+++ A 
Sbjct: 232 GRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAY 291

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q+G+F + L+++ +M   G  PN     S++  C +    E G  IH   ++  +E + 
Sbjct: 292 SQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHV 351

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG----YAHCGYGFEALNVVSS 236
            V  S+L  Y++      +  +F  +S  D   W+ +I       +HC    +AL +  S
Sbjct: 352 VVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCR---DALPLYRS 408

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML EG+          L+ C  +A+   G+ +H  +I S +E  +  + +L++MY K   
Sbjct: 409 MLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGI-SLVNMYAKCGT 467

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A KVF+R+ ++  I WN++   + E K+P +   LF +    G  P+ +TF  +L  
Sbjct: 468 VGEARKVFDRINNRSRILWNSMITAYQE-KDPHEALHLFREMQPEGVSPDRITFMTVLNA 526

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C    DL+ G  +    +  GF  +  V ++L  M+ +CG++  A  VFD++ ++++ +W
Sbjct: 527 CVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSW 586

Query: 417 NELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVG--QIHGA 473
           N +++ Y     D +   + C   +  G+  +  TF  ++  C  S+  ++V   QIH  
Sbjct: 587 NNMIAAY-VQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNAC--SDPNRLVDGRQIHSW 643

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-----FSNGAER-LDMASWGAMMSALVHQ 527
           I ++   +   + + LI  Y N G L+N+ E     FSN  +   D+  W +M++A    
Sbjct: 644 IAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQH 703

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   +A+ ++  +     + D     ++LN+CA +   ++ ++IH  V++ G  T+V VA
Sbjct: 704 GEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVA 763

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           ++++  Y KCG    A + F+++    D+ ++  LI +YA HG   +A+ IF +++   +
Sbjct: 764 NSIVFMYGKCGSFDEASIVFEKT-KHKDISLWTALIASYARHGHGEQALWIFRRLRQDGI 822

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           + S  TFV+++SACSH GL+++GC  F SM ++ G++P+ + + CLVD+L+R G+L  A+
Sbjct: 823 ELSNLTFVAMLSACSHVGLIEEGCEFFASM-AELGIEPNMEHHSCLVDLLARAGHLHTAE 881

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +  MP   +  V  +LL+ CR+HG+ E     +EKL  L P+++A +V LS
Sbjct: 882 EFLSRMPVAANTIVLTALLAACRVHGDVERARRVAEKLEALDPESEAPYVTLS 934



 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 182/622 (29%), Positives = 306/622 (49%), Gaps = 27/622 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           ++ R+ GTQ+           DI ++N  I MY KCG     ++ F  M  R++VSWT++
Sbjct: 32  IQDRLAGTQLE---------LDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVM 82

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           + A  Q+G+F + L+++ +M   G  PN     S++  C +    E G  IH   ++  +
Sbjct: 83  IGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 142

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAE-RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           E +  V  S+L  Y++      +  + F  +   DV  W  MIG Y+  G    ++ +  
Sbjct: 143 ESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFR 202

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIK 293
            ML EG   +  TF++ L GC   +  + GRQIH L++ S +E    I ++N  I+MY+K
Sbjct: 203 EMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVK 262

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +D A + F RM  +DV+SW  + G +S++     +  LF + +L G+ PN VTF  +
Sbjct: 263 CGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSI 322

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C     L+ G Q+  L +         V +SL+ M+ RC + E + S+FD +S ++ 
Sbjct: 323 LSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDS 382

Query: 414 TTWNELL---SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            +W+ ++   S    +C DA  L  + ++   GV         V+E C      +    +
Sbjct: 383 VSWSTIIMACSREDSHCRDA--LPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLV 440

Query: 471 HGAIIKTGFSSCGYICSSLIKSYV---NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
           H  +I++G      +  SL+  Y      G+    F+  N   R+    W +M++A   +
Sbjct: 441 HAHVIESGLEG-DLVGISLVNMYAKCGTVGEARKVFDRINNRSRI---LWNSMITAY-QE 495

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
              HEA+ +F  +   G  PD     T+LN+C      +  ++IH  ++  GF  +V VA
Sbjct: 496 KDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVA 555

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+ + YAKCG +  AR  FD S    DV+ +N +I AY        A+ +   M+L  +
Sbjct: 556 TALFNMYAKCGSLGEARGVFD-SMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGM 614

Query: 648 QPSQATFVSVMSACSHKG-LVD 668
           +P +ATF S+++ACS    LVD
Sbjct: 615 RPDKATFTSLLNACSDPNRLVD 636



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 278/586 (47%), Gaps = 10/586 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   G  P+   + +++  C  +GA E G  I       ++E +  V    +N Y K G 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +  A + F  +   DV  W  MIG Y+  G    +L +   ML EG   +  TF++ L G
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK-SSGMDYAFKVFERMADKDVIS 314
           C   +  + GRQIH L++ S +E  + + N+L+ MY +  S  D   + F RM  +DV+S
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVS 180

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W  + G +S++     +  LF + +L G+ PN VTF  +L  C     L+ G Q+  L +
Sbjct: 181 WTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVV 240

Query: 375 HCGFLDEEN--VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
                   +  V +  I M+ +CG ++ A   F  +  +++ +W  ++  Y  +   +  
Sbjct: 241 ESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLS 300

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L+ F  +   G   N  TF  ++  C      +   QIH  ++++   S   + +SL+  
Sbjct: 301 LQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGM 360

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ-GHNHEAVTIFHSLVEAGEKPDEYI 551
           Y      ++S    +     D  SW  ++ A   +  H  +A+ ++ S++  G  P    
Sbjct: 361 YSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLA 420

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L  +L +C ++   +  K +H  VI+ G   ++ V  ++++ YAKCG +  AR  FD+  
Sbjct: 421 LSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGEARKVFDR-I 478

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           N+   I++N++I AY       EA+ +F +M+   + P + TF++V++AC +   ++ G 
Sbjct: 479 NNRSRILWNSMITAYQEKD-PHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGR 537

Query: 672 LLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            +  + +DS  G          L +M ++ G L +A+ V + M F+
Sbjct: 538 TIHTRIVDS--GFAADVRVATALFNMYAKCGSLGEARGVFDSMVFR 581



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 6/274 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D       L+   +    V G Q+H  I +    NDI +   LI MY+ CG      
Sbjct: 614 MRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAR 673

Query: 100 RVFDEM------AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
            +FD +        R+L  WT +++A  Q+GE+   L++Y  M +     +     SV+ 
Sbjct: 674 EIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLN 733

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C  +     G +IH   ++  +  +  V  S++  Y K G    A  VF      D+  
Sbjct: 734 ACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISL 793

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W A+I  YA  G+G +AL +   +  +GI +   TF+  L  CS V   + G +    + 
Sbjct: 794 WTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMA 853

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
              +E ++   + L+D+  ++  +  A +   RM
Sbjct: 854 ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRM 887


>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
 gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
          Length = 934

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 216/736 (29%), Positives = 366/736 (49%), Gaps = 21/736 (2%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           FL   P FL    ++S +L+S   G  VH  + + G  +D+ +Q  L+ MY KCG     
Sbjct: 203 FLPSRPTFLTVLAAIS-SLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEA 261

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + VFD M   +++ W+ ++SA +   E++  L+++  M+  G  PN   + SV+  C   
Sbjct: 262 VEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGP 321

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A E G  IH   ++   E +  VG ++++ Y K G +  A  VF+ +    V   N M+
Sbjct: 322 QALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMM 381

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G  A  G    AL +   M+ EGI  D  TF++AL  CS  +    G   H  ++   +E
Sbjct: 382 GACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLE 441

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             I + NAL++MY K   ++ A  VFE + ++DV +WN +   + +N+       +F   
Sbjct: 442 LDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHM 501

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           + SG +P+ VTF+I L  C     L     +  L    G +    V ++L+ M+ R G +
Sbjct: 502 MQSGYKPDEVTFAITLNACYHPRFLR---DVHSLISETG-ISNTVVQNALVVMYGRFGLL 557

Query: 399 EMAHSVFDNVSYKNITTWNELLSG---YCFNCC---------DADVLKTFCNIWESGVEV 446
           E  + VF+ +  ++IT+WN +++     C+N           D++ LK F  + ++GV  
Sbjct: 558 EEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWP 617

Query: 447 NGCTFFYVVETCCR-SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE- 504
           +  +F  VV+        +  +  +   I  +       I ++LI  Y   G    + + 
Sbjct: 618 DKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDL 677

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
           F + AER D  +W  MMS      H  +++ +F  +++ G  PD+  + T+LN CA++ A
Sbjct: 678 FDSMAER-DAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPA 736

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            Q  K+I  ++     +    + +A+++ YAKCG    AR  F       D + +N LI 
Sbjct: 737 LQEGKAICVWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFS-VMQGRDAVSWNALIG 795

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           AY  +     A +IF  M+L    P   TF +++S CSH GL+ +    F+ M   Y ++
Sbjct: 796 AYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMREDYYVE 855

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
                YGC+VD+L R G + +A+ V E MP    P V+ +LLS C++HG  + G+ A+E+
Sbjct: 856 AETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGKRAAER 915

Query: 745 LLLLLPKNDAAHVLLS 760
           L+ L P+  +A+V+LS
Sbjct: 916 LVELDPEVTSAYVVLS 931



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 164/696 (23%), Positives = 323/696 (46%), Gaps = 26/696 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R   + L +  S S++L     G Q+H  I +     D  + N LI MY KCG      
Sbjct: 4   VRDRFVDLLRQCSRSKDLAR---GRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDAS 60

Query: 100 RVFDEMAER---NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +VF ++ E    NLV+WT +++A  +NG+  + ++++  M+  G  P+   + ++ + C 
Sbjct: 61  QVFYQLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACG 120

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           +    E G  IH +   +    +  +G S++  Y K G ++ A  +F S+   +   WN+
Sbjct: 121 NPENLEDGKKIHAY---LSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNS 177

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++G +       EA+ +   ML  G    + TF+  L   S +     G+ +H  +  + 
Sbjct: 178 LMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLAEAG 237

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            E  + +  AL++MY K   +  A +VF+RM   DVI W+ +           ++  LF 
Sbjct: 238 HEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFR 297

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           K  L G+RPN+VT   +L  C     L+ G  +    +  G+  +  V ++++ M+ +CG
Sbjct: 298 KMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCG 357

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           ++E A  VF  V  +++ T N ++         +  LK F  +   G+E +  TF   + 
Sbjct: 358 SLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALC 417

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C  +         H  +++ G     ++ ++L+  Y   G+++ +          D+ +
Sbjct: 418 ACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQDVRT 477

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFV 575
           W AM+ A V        + +F  ++++G KPDE      LN+C     + R  + +H  +
Sbjct: 478 WNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNAC----YHPRFLRDVHSLI 533

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD----QSFNSNDVIV-------YNTLIM 624
            + G +  V V +A++  Y + G ++     F+    +S  S +V++       +N++I 
Sbjct: 534 SETGISNTV-VQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIF 592

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           A+   G  SEA+++F +M+ A + P + +FV+V+ A S+ G+ +      +++ +   ++
Sbjct: 593 AHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVE 652

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
                   L+ M  R G    A+ + + M  + + T
Sbjct: 653 DGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVT 688



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 162/700 (23%), Positives = 318/700 (45%), Gaps = 25/700 (3%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
           RL    Q   +S  R   + + ++    ENL+    G ++H +   L   +D+ L ++LI
Sbjct: 95  RLFQQMQLEGNSPDRITLVTIFEACGNPENLED---GKKIHAY---LSCNSDVVLGSSLI 148

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
            MY KCG       +F  M E N V+W  ++ A IQ+   +  +++Y +M   GF+P+  
Sbjct: 149 TMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRP 208

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
              +V+    S+ +   G  +H    +   E +  V  +++N Y K G V  A  VF  +
Sbjct: 209 TFLTVLAAISSLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRM 268

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              DV  W+A+I  + +C    E+L +   M  EG   +  T ++ L  C      + G+
Sbjct: 269 PRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGK 328

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            IH  ++ +  E  + + NA++ MY K   ++ A+ VF R+  + V++ N + G  +   
Sbjct: 329 GIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQG 388

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +      LF   +  G   +++TF   L  C     L  G       L CG   +  V +
Sbjct: 389 DSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVAN 448

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+ M+ +CG VE A  VF+ +  +++ TWN ++  Y  N  +   L  F ++ +SG + 
Sbjct: 449 ALVNMYGKCGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKP 508

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  TF   +  C    + + +  +H  I +TG S+   + ++L+  Y  FG L+  ++  
Sbjct: 509 DEVTFAITLNACY---HPRFLRDVHSLISETGISNT-VVQNALVVMYGRFGLLEEGYQVF 564

Query: 507 NGAERLDMASWGAMMS------------ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
              ++  + SW  M++            A V  G + EA+ +F  + +AG  PD+     
Sbjct: 565 EKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVA 624

Query: 555 ILNSCAAIGAYQ-RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++ + + +G  +     +   +        V + +A+I  Y +CG    AR  FD S   
Sbjct: 625 VVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGSFGKARDLFD-SMAE 683

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D + +NT++          +++++F +M      P + T ++V++ C+    + +G  +
Sbjct: 684 RDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAI 743

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              +D    +  +      +++M ++ G  ++A+ +  +M
Sbjct: 744 CVWLD-HTPLSANQMIGNAILNMYAKCGSRDEARRIFSVM 782


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 209/730 (28%), Positives = 370/730 (50%), Gaps = 8/730 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER--NLVSWTLIVSAA 120
           G QVH  ++    + D +    ++ MY+ CG F    ++F  +  R  ++  W  I+S+ 
Sbjct: 54  GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++NG  +  L  Y  M   G  P+      ++K CV++   +    +      + ++ N 
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE 173

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y + G +    ++F  +   D   WN M+ GYA CG     +   S M  +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I+ +  TF   L  C+     D+G Q+HGL++ S V+   SI N+L+ MY K    D A
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F  M+  D ++WN +  G+ ++    ++ + F++ I SG  P+ +TFS LL    K 
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L+   Q+ C  +      +  +TS+LI  + +C  V MA ++F   +  ++  +  ++
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N    D L+ F  + +  +  N  T   ++         ++  ++HG IIK GF 
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   I  ++I  Y   G+++ ++E      + D+ SW +M++      +   A+ IF  +
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
             +G   D   +   L++CA + +    K+IH F+IK    ++VY  S +ID YAKCG++
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMS 659
           K A   F ++    +++ +N++I A  +HG + +++ +F +M + + ++P Q TF+ ++S
Sbjct: 594 KAAMNVF-KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIIS 652

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           +C H G VD+G   F+SM   YG+QP  + Y C+VD+  R G L +A   ++ MPF P  
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA 712

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNV 779
            V+ +LL  CR+H N EL E AS KL+ L P N   +VL+S        N  + E V  V
Sbjct: 713 GVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS----NAHANAREWESVTKV 768

Query: 780 NDGIKTVDLK 789
              +K  +++
Sbjct: 769 RSLMKEREVQ 778



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 281/591 (47%), Gaps = 15/591 (2%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISS 208
           +++ C +      G  +H F +   I  + +    +L  YA  G  +   ++FY   +  
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
             +  WN++I  +   G   +AL     ML  G++ D  TF   ++ C  + +F     +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
              +    ++C+  + ++LI  Y++   +D   K+F+R+  KD + WN +  G+++    
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                 F    +    PN VTF  +L  C   L +DLG+QL  L +  G   E ++ +SL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ +CG  + A  +F  +S  +  TWN ++SGY  +    + L  F  +  SGV  + 
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            TF  ++ +  + EN +   QIH  I++   S   ++ S+LI +Y     +  +    + 
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
              +D+  + AM+S  +H G   +++ +F  LV+    P+E  L +IL     + A +  
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           + +H F+IK GF+    +  AVID YAKCG +  A   F++  +  D++ +N++I   A 
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER-LSKRDIVSWNSMITRCAQ 519

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK-----GLVDKGCLLFKSMDSQYGM 683
               S A++IF +M ++ +     +  + +SAC++      G    G ++  S+ S    
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           + +      L+DM ++ G L+ A +V + M  + +   + S+++ C  HG 
Sbjct: 580 EST------LIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGK 623



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 210/399 (52%), Gaps = 1/399 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HG +V  G   +  ++N+L++MYSKCG F    ++F  M+  + V+W  ++S  +
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G  +  L  + +M ++G +P+     S++         E+   IHC+ ++  I  + F
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K   V+ A+ +F   +S DV  + AMI GY H G   ++L +   ++   
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I+ ++ T ++ L    ++    +GR++HG II+   +   +I  A+IDMY K   M+ A+
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++FER++ +D++SWN++    +++ NP     +F +  +SG   + V+ S  L  C  L 
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
               G  +    +      +    S+LI M+ +CG ++ A +VF  +  KNI +WN +++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616

Query: 422 GYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCC 459
               +    D L  F  + E SG+  +  TF  ++ +CC
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + ++ +LS   NL S   G  +HG ++K    +D++ ++ LI MY+KCG     + VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
             M E+N+VSW  I++A   +G+    L ++ +M + +G  P++     ++  C  +G  
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660

Query: 162 EFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIG 219
           + G            I+        V++ + + G +  A     S+    D G W  ++G
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720

Query: 220 G 220
            
Sbjct: 721 A 721



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG-ARMAFDQS 610
           L  +L +C+     ++ K +H F+I    + + Y    ++  YA CG      +M +   
Sbjct: 38  LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
              + +  +N++I ++  +GL+++A+  + KM    + P  +TF  ++ AC
Sbjct: 98  LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148


>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
 gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
          Length = 836

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/689 (28%), Positives = 354/689 (51%), Gaps = 23/689 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH +I    F  DI LQ +L+ MY+KCG       VFD MA +++V+W  +  A++ 
Sbjct: 143 GKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAMAGASVH 202

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF- 181
           NG+     K+  +M   G  PN     S+ +     G+S       C A++ R+  + + 
Sbjct: 203 NGQSH---KLLREMDLQGVKPNATTYASITR-----GSSTL---TGCRAMEQRLLASGYM 251

Query: 182 ----VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
               V  +++N YAK GD+  A +VF  +   DV  W+ MI  Y   G   EA+ +   M
Sbjct: 252 SHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLM 311

Query: 238 LFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
             E  +  +  TF+  +  C+   D   G Q+HG ++   +E  +++ +AL+ MY+K   
Sbjct: 312 ESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGS 371

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A K F+R+  +DV+ WN +   +SE  +P Q    +    +    PN VT++ +L  
Sbjct: 372 LEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQVIEAYEAMDV---EPNAVTYTNVLIA 428

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  + DL  G ++    +  G   +  + ++L+ ++ +C +++ A  VF+ +  K++  W
Sbjct: 429 CSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSLYIKCRSLKSACQVFEAMGKKDVIPW 488

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++ GY  + CD + L+ +  + E+GVE N  TF   ++ C + ++ +   ++   I  
Sbjct: 489 NFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIKDIETGSKVEAMITT 548

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSALVHQGHNHEAV 534
            GF +     ++L+  Y   G L+ +     S   ER D+  W AM+++    G   EA+
Sbjct: 549 KGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAMIASYAQAGRGEEAL 608

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            ++ +++    KP+     ++L++C+++G     + IH  +       +V V ++++  Y
Sbjct: 609 ALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMY 668

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           A+CG ++ A   F +  N  DV  +  ++ A+AHHG  + A+E+  +M+L  + P   TF
Sbjct: 669 ARCGSLRDAWSCFAKIHN-RDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTF 727

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            SV+ ACSH+G +++G   F SM   Y ++PS D Y C+VD+L+R G L +A+ VI+ + 
Sbjct: 728 QSVLHACSHEGSLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVG 787

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            +     +  LL   R H N  +G  A++
Sbjct: 788 LERESMGWMMLLGASRTHSNLAMGVEAAQ 816



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 160/635 (25%), Positives = 305/635 (48%), Gaps = 12/635 (1%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           G+ ++++ +N LI ++ K G       VFD M ++N+ SW++++ A  QNG  +    ++
Sbjct: 53  GYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLF 112

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             M++ G  PN      V+  C       FG  +H +      + +  +  S++N YAK 
Sbjct: 113 ERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKC 172

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G  A A+ VF S++  D+  WNAM G   H G   ++  ++  M  +G+  +  T+ +  
Sbjct: 173 GSPADAKAVFDSMARKDIVTWNAMAGASVHNG---QSHKLLREMDLQGVKPNATTYASIT 229

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           +G S +      R +   ++ S     + + NAL+++Y K   ++ A KVF R+  KDVI
Sbjct: 230 RGSSTLTGC---RAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKVFNRLERKDVI 286

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           SW+T+   ++++    +   ++       S  PN VTF  ++  C    D+  G+Q+   
Sbjct: 287 SWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGCGDVIRGIQVHGR 346

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  G   +  V S+L+ M+ +CG++E A   FD V  +++  WN +LS Y        V
Sbjct: 347 LVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQV 406

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ +  +    VE N  T+  V+  C   E+     ++H  I+ +G  +   + ++L+  
Sbjct: 407 IEAYEAM---DVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLSL 463

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y+    L ++ +      + D+  W  MM   +    + EA+ ++  + EAG + +    
Sbjct: 464 YIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTF 523

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF-DQSF 611
              L +C+ I   +    +   +   GF T+V   +A+++ YA CGD++ A+  F  +  
Sbjct: 524 ANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRG 583

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              DV+ +  +I +YA  G   EA+ ++  M    ++P+  T+ SV+SACS  G + +G 
Sbjct: 584 ERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGR 643

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            +   ++ +   +        L+ M +R G L DA
Sbjct: 644 KIHSKLEGK-AEELDVAVQNSLLSMYARCGSLRDA 677



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 7/401 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           + G QVHG +V LG   D+ + + L+ MY KCG      + FD + +R+++ W  ++SA 
Sbjct: 338 IRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAY 397

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G     ++ Y  M      PN     +V+  C +M     G  +H   +   +E + 
Sbjct: 398 SERGSPQQVIEAYEAMDVE---PNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDM 454

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  ++L+ Y K   + +A +VF ++   DV  WN M+ GY       EAL + + M   
Sbjct: 455 TMETALLSLYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEA 514

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +  TF NAL+ CS + D + G ++  +I     E  +    AL++MY     ++ A
Sbjct: 515 GVEANNVTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAA 574

Query: 301 FKVF--ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            +VF   R   +DV+ W  +   +++     +  +L+   +    +PN VT++ +L  C 
Sbjct: 575 KRVFGSRRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACS 634

Query: 359 KLLDLDLGLQLQC-LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            L ++  G ++   L      LD   V +SL+ M+ RCG++  A S F  +  +++ +W 
Sbjct: 635 SLGNILEGRKIHSKLEGKAEELDVA-VQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWT 693

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +++ +  +   A  L+    +   GV  +  TF  V+  C
Sbjct: 694 GMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHAC 734



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 124/287 (43%), Gaps = 4/287 (1%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +  A +L     +K    G++V   I   GF  D+     L+ MY+ CG      RVF  
Sbjct: 521 VTFANALKACSKIKDIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGS 580

Query: 105 M--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
                R++V WT ++++  Q G  +  L +Y  M +    PN     SV+  C S+G   
Sbjct: 581 RRGERRDVVFWTAMIASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNIL 640

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH        E +  V  S+L+ YA+ G +  A   F  I + DV  W  M+  +A
Sbjct: 641 EGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFA 700

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSI 281
           H G+   AL +V  M   G++ D  TF + L  CS     + G      + +   VE S 
Sbjct: 701 HHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEGSLERGWASFVSMAVDYAVEPSK 760

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
                ++D+  ++  +  A +V + +  +++ + W  L G    + N
Sbjct: 761 DHYLCMVDLLARAGRLAEAREVIQFVGLERESMGWMMLLGASRTHSN 807



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 8/233 (3%)

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           TG+    Y  + LI+ +  FG    S E  +G ++ ++ SW  M+ A    GH +EA  +
Sbjct: 52  TGYLDNVYFRNWLIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLL 111

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +   G +P+      +L +C+        K +H ++    F  ++ + +++++ YAK
Sbjct: 112 FERMESEGIRPNAVTCLHVLGACSYQNELPFGKKVHAYISASEFKWDISLQTSLVNMYAK 171

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG    A+  FD S    D++ +N +  A  H+G   ++ ++  +M L  ++P+  T+ S
Sbjct: 172 CGSPADAKAVFD-SMARKDIVTWNAMAGASVHNG---QSHKLLREMDLQGVKPNATTYAS 227

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +    S       GC   +      G          LV++ ++ G LE A+ V
Sbjct: 228 ITRGSS----TLTGCRAMEQRLLASGYMSHVPVQNALVNVYAKCGDLEGARKV 276



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + +     LS   +L + + G ++H  +       D+ +QN+L++MY++CG      
Sbjct: 619 IKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAEELDVAVQNSLLSMYARCGSLRDAW 678

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F ++  R++ SWT +V+A   +G     L++  +M+  G  P+     SV+  C   G
Sbjct: 679 SCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVREMELCGVSPDAVTFQSVLHACSHEG 738

Query: 160 ASEFGY-SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV--FYSISSDDVGCWNA 216
           + E G+ S    A+   +E +      +++  A+ G +A A  V  F  +  + +G W  
Sbjct: 739 SLERGWASFVSMAVDYAVEPSKDHYLCMVDLLARAGRLAEAREVIQFVGLERESMG-WMM 797

Query: 217 MIGG---YAHCGYGFEALNVVS 235
           ++G    +++   G EA   V+
Sbjct: 798 LLGASRTHSNLAMGVEAAQCVA 819


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 207/722 (28%), Positives = 370/722 (51%), Gaps = 42/722 (5%)

Query: 44   PIF----LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            P+F    L+ S S SE+L         HG+ VK+G   D+F+   L+ +Y+K G      
Sbjct: 765  PVFKMCLLSASPSASESL---------HGYAVKIGLQWDVFVAGALVNIYAKFGLIREAR 815

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             +FD MA R++V W +++ A +        + ++ +    GF P++  + ++ +V     
Sbjct: 816  VLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRV----- 870

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                          ++ +KN      +L    K     A +   Y     DV  WN  + 
Sbjct: 871  --------------VKCKKN------ILEL--KQFKAYATKLFMYDDDGSDVIVWNKALS 908

Query: 220  GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
             +   G  +EA++    M+   +  D  TF+  L   + +   ++G+QIHG+++RS ++ 
Sbjct: 909  RFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQ 968

Query: 280  SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
             +S+ N LI+MY+K+  +  A  VF +M + D+ISWNT+  G + +     +  +F   +
Sbjct: 969  VVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLL 1028

Query: 340  LSGSRPNHVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
                 P+  T + +LR C  L     L  Q+   A+  G + +  V+++LI ++ + G +
Sbjct: 1029 RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKM 1088

Query: 399  EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            E A  +F N    ++ +WN ++ GY  +      L+ +  + ESG   +  T     +  
Sbjct: 1089 EEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAA 1148

Query: 459  CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                  +   QIH  ++K GF+   ++ S ++  Y+  G+++++    +     D  +W 
Sbjct: 1149 GGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWT 1208

Query: 519  AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
             M+S  V  G    A+  +H +  +  +PDEY   T++ +C+ + A ++ + IH  ++KL
Sbjct: 1209 TMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKL 1268

Query: 579  GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
                + +V ++++D YAKCG+I+ AR  F ++ N+  +  +N +I+  A HG   EA++ 
Sbjct: 1269 NCAFDPFVMTSLVDMYAKCGNIEDARGLFKRT-NTRRIASWNAMIVGLAQHGNAKEALQF 1327

Query: 639  FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
            F  MK   + P + TF+ V+SACSH GLV +    F SM   YG++P  + Y CLVD LS
Sbjct: 1328 FKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALS 1387

Query: 699  RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
            R G +E+A+ VI  MPF+ S ++YR+LL+ CR+  ++E G+  +EKLL L P + AA+VL
Sbjct: 1388 RAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVL 1447

Query: 759  LS 760
            LS
Sbjct: 1448 LS 1449



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 177/679 (26%), Positives = 317/679 (46%), Gaps = 38/679 (5%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSA 119
            LG + H  I+  G   D F+ NNLI MY+KCG      ++FD   +  R+LV+W  I+SA
Sbjct: 674  LGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSA 733

Query: 120  -AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             A    +   G  ++  ++ +        +  V K+C+   +     S+H +A+KI ++ 
Sbjct: 734  LAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQW 793

Query: 179  NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
            + FV  +++N YAK G +  A  +F  ++  DV  WN M+  Y      +EA+ + S   
Sbjct: 794  DVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFH 853

Query: 239  FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              G   D  T    L+  S V                 V+C  +I+              
Sbjct: 854  RTGFRPDDVT----LRTLSRV-----------------VKCKKNILEL-------KQFKA 885

Query: 299  YAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            YA K+F    D  DVI WN     F +     +    F   I S    + +TF ++L   
Sbjct: 886  YATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV 945

Query: 358  GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
              L  L+LG Q+  + +  G     +V + LI M+ + G+V  A SVF  ++  ++ +WN
Sbjct: 946  AGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWN 1005

Query: 418  ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE-NQQMVGQIHGAIIK 476
             ++SG   +  +   +  F ++    +  +  T   V+  C   E    +  QIH   +K
Sbjct: 1006 TMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMK 1065

Query: 477  TGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G     ++ ++LI  Y   G+++ + F F N  +  D+ASW A+M   +  G   +A+ 
Sbjct: 1066 AGVVLDSFVSTALIDVYSKRGKMEEAEFLFVN-QDGFDLASWNAIMHGYIVSGDFPKALR 1124

Query: 536  IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            ++  + E+GE+ D+  L     +   +   ++ K IH  V+K GFN +++V S V+D Y 
Sbjct: 1125 LYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYL 1184

Query: 596  KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
            KCG+++ AR  F +   S D + + T+I     +G    A+  + +M+L+ +QP + TF 
Sbjct: 1185 KCGEMESARRVFSE-IPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFA 1243

Query: 656  SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            +++ ACS    +++G  +  ++  +      P     LVDM ++ G +EDA+ + +    
Sbjct: 1244 TLVKACSLLTALEQGRQIHANI-VKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNT 1302

Query: 716  QPSPTVYRSLLSGCRIHGN 734
            +   + + +++ G   HGN
Sbjct: 1303 RRIAS-WNAMIVGLAQHGN 1320



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 130/595 (21%), Positives = 263/595 (44%), Gaps = 42/595 (7%)

Query: 150  SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--S 207
            S+++  ++      G   H   L      + FV  +++  YAK G +++A ++F +   +
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 208  SDDVGCWNAMIGGYA-HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
            + D+  WNA++   A H     +  ++   +    ++  ++T     + C L A      
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 267  QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
             +HG  ++  ++  + +  AL+++Y K   +  A  +F+ MA +DV+ WN +   + +  
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 327  NPGQTASLFHKFILSGSRPNHVTFSILLR--QCGK-LLDLDLGLQLQCLALHCGFLDEEN 383
               +   LF +F  +G RP+ VT   L R  +C K +L+L    Q +  A          
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELK---QFKAYA---------- 887

Query: 384  VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
               + ++M+   G+              ++  WN+ LS +       + +  F ++  S 
Sbjct: 888  ---TKLFMYDDDGS--------------DVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 444  VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            V  +G TF  ++         ++  QIHG ++++G      + + LI  YV  G +  + 
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRAR 990

Query: 504  EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI- 562
                    +D+ SW  M+S     G    +V +F  L+     PD++ + ++L +C+++ 
Sbjct: 991  SVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLE 1050

Query: 563  GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            G Y     IH   +K G   + +V++A+ID Y+K G ++ A   F    +  D+  +N +
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQ-DGFDLASWNAI 1109

Query: 623  IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-KGCLLFKSMDSQY 681
            +  Y   G   +A+ ++  M+ +  +  Q T V+   A    GLV  K      ++  + 
Sbjct: 1110 MHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAG--GLVGLKQGKQIHAVVVKR 1167

Query: 682  GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            G          ++DM  + G +E A+ V   +P  P    + +++SGC  +G +E
Sbjct: 1168 GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEE 1221



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 5/270 (1%)

Query: 41   RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
            R D I L  +   +  L     G Q+H  +VK GF  D+F+ + ++ MY KCG      R
Sbjct: 1135 RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARR 1194

Query: 101  VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            VF E+   + V+WT ++S  ++NG+ +  L  Y  M+ +   P+E+   +++K C  + A
Sbjct: 1195 VFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTA 1254

Query: 161  SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
             E G  IH   +K+    +PFV  S+++ YAK G++  A  +F   ++  +  WNAMI G
Sbjct: 1255 LEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVG 1314

Query: 221  YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEV 277
             A  G   EAL     M   G+  D+ TFI  L  CS   LV+  +     + +     +
Sbjct: 1315 LAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVS--EAYENFYSMQKNYGI 1372

Query: 278  ECSISIVNALIDMYIKSSGMDYAFKVFERM 307
            E  I   + L+D   ++  ++ A KV   M
Sbjct: 1373 EPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 156/390 (40%), Gaps = 34/390 (8%)

Query: 350  FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV- 408
            FSIL RQ     DL LG +     L  G   +  VT++LI M+ +CG++  A  +FD   
Sbjct: 660  FSIL-RQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTP 718

Query: 409  -SYKNITTWNELLSGYCFNCCDA-DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
             + +++ TWN +LS    +   + D    F  +  S V     T   V + C  S +   
Sbjct: 719  DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSA 778

Query: 467  VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
               +HG  +K G     ++  +L+  Y  FG +  +    +G    D+  W  MM A V 
Sbjct: 779  SESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVD 838

Query: 527  QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
                +EA+ +F      G +PD+  L T+             K    +  KL        
Sbjct: 839  TCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKL-------- 890

Query: 587  ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
                                F    + +DVIV+N  +  +   G   EA++ F  M  + 
Sbjct: 891  --------------------FMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930

Query: 647  LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            +     TFV +++  +    ++ G  +   +  + G+        CL++M  + G +  A
Sbjct: 931  VACDGLTFVVMLTVVAGLNCLELGKQI-HGIVMRSGLDQVVSVGNCLINMYVKAGSVSRA 989

Query: 707  KHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            + V   M  +     + +++SGC + G +E
Sbjct: 990  RSVFGQMN-EVDLISWNTMISGCTLSGLEE 1018


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  345 bits (884), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 205/710 (28%), Positives = 347/710 (48%), Gaps = 3/710 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F A+ L      KS   G +VH H+    F  DI+L N LI+MYSKCG       VF  M
Sbjct: 53  FYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSM 112

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            ++++VSW  ++S    +G     + ++  M+  G  PN+ +  S++  C +    EFG 
Sbjct: 113 EDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGE 172

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH    K   E +  V  +++N Y K G +  A +VF  +   +V  W AMI GY   G
Sbjct: 173 QIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHG 232

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA  +   ++  G   +K +F + L  C+   D + G ++H  I ++ +E  + + N
Sbjct: 233 DSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGN 292

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALI MY +   +  A +VF+ +   + +SWN +  G+ E     +   LF      G +P
Sbjct: 293 ALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFME-EAFRLFRDMQQKGFQP 351

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T++ LL  C    DL+ G +L    +   +  +  V ++LI M+ +CG++E A  VF
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +  KN  +WN  ++  C +  + +  + F  +    V  +  TF  ++ +C   E+ +
Sbjct: 412 NQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFE 471

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               IHG I + G  S   + ++LI  Y   G+L ++ E      R D+ SW AM++A V
Sbjct: 472 RGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYV 531

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G N  A  +F      G K D+Y    +L + A +      + IH  V K G   ++ 
Sbjct: 532 QHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIR 591

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + + +I  Y+KCG ++ A   F ++    DV+ +N ++ AY H     +A+++F +M+L 
Sbjct: 592 ILTTLIKMYSKCGSLRDAYSVF-KNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLE 650

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P  AT+ SV++AC+  G ++ G   F +   +  M+     Y C+V  L R   L++
Sbjct: 651 GVNPDSATYTSVLNACARLGAIEHG-KKFHTQLKEAAMETDTRHYACMVAALGRASLLKE 709

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           A+  IE +  +    ++ SLL  CRIH N  L E A E LL +  ++  A
Sbjct: 710 AEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPA 759



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 234/470 (49%), Gaps = 3/470 (0%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  +   +   LQ C        G+++H  +  ++ E  I + N LI MY K   ++ 
Sbjct: 45  RGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIED 104

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF+ M DKDV+SWN +  G++ +    +   LF++    G +PN  +F  +L  C  
Sbjct: 105 ANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQT 164

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            + L+ G Q+       G+  + NV+++LI M+C+CG++E+A  VF+ +  +N+ +W  +
Sbjct: 165 PIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAM 224

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SGY  +    +    F  +  SG + N  +F  ++  C    + +   ++H  I + G 
Sbjct: 225 ISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGL 284

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + ++LI  Y   G L N+ +  +     +  SW AM++    +G   EA  +F  
Sbjct: 285 EQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGY-GEGFMEEAFRLFRD 343

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + + G +PD +   ++L  CA      R K +H  +++  +  +V VA+A+I  YAKCG 
Sbjct: 344 MQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGS 403

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++ AR  F+Q    N  + +N  I     HG   EA ++F +M+  ++ P   TF+++++
Sbjct: 404 LEEARKVFNQMPEKN-AVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLN 462

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +C+     ++G  +   +D Q+GM  +      L+ M  R G L DA+ V
Sbjct: 463 SCTSPEDFERGRYIHGKID-QWGMLSNNLVANALISMYGRCGKLADAREV 511


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 200/696 (28%), Positives = 349/696 (50%), Gaps = 43/696 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H   +  GF +  F+ N LI +Y K G+     +VF+ +  R+ VSW  ++S   QNG
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + ++  +              V+  C  +   EFG  +H   LK       +V  
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCN 290

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y++ G++++AE++F+ +S  D   +N++I G A  GY   AL +   M  +    
Sbjct: 291 ALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKP 350

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V     G+Q H   I++ +   I +  +L+D+Y+K S         
Sbjct: 351 DCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS--------- 401

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 D+ + +  F  + +  N  ++  +F +  + G  PN  T+  +L+ C  L   D
Sbjct: 402 ------DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATD 455

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    L  GF     V+S LI M+ + G ++ A  +F  +   ++ +W  +++GY 
Sbjct: 456 LGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYT 515

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L  F  + + G++ +   F   +  C   +      QIH     +G+S    
Sbjct: 516 QHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLS 575

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  ++   +     D  SW +++S     G+  EA+ IF  + +AG
Sbjct: 576 IGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG 635

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            + + +  G+ +++ A I   +  K IH  + K G+++E  V++A+I  YAKCG I    
Sbjct: 636 LEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI---- 691

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
                     D I +N++I  Y+ HG   EA+++F+ MK  ++ P+  TFV V+SACSH 
Sbjct: 692 ----------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHV 741

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F+SM   + + P P+ Y C+VD+L R+G L  AK  +E MP QP   V+R+
Sbjct: 742 GLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRT 801

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C +H N ++GE+A+  LL L PK+ A +VL+S
Sbjct: 802 LLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVS 837



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 298/613 (48%), Gaps = 46/613 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G Q+HG ++K GF+++ ++ N L+ +YS+ G      ++F  M++R+ VS+  ++S   
Sbjct: 269 FGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLA 328

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G  +  L ++  M  +   P+   V S++  C S+GA   G   H +A+K  +  +  
Sbjct: 329 QQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L+ Y K  D+  A   F                 Y       ++  + + M  EG
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFFLC---------------YGQLDNLNKSFQIFTQMQIEG 433

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +++T+ + L+ C+ +   D+G QIH  ++++  + ++ + + LIDMY K   +D+A 
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F R+ + DV+SW  +  G++++    +  +LF +    G + +++ F+  +  C  + 
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G Q+   +   G+ D+ ++ ++L+ ++ RCG V  A++ FD +  K+  +WN L+S
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 613

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+  +    + L  F  + ++G+E+N  TF   V       N ++  QIHG I KTG+ S
Sbjct: 614 GFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDS 673

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y   G +D+              SW +M++     G   EA+ +F  + 
Sbjct: 674 ETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMK 720

Query: 542 EAGEKPDEYILGTILNSCAAIG------AYQRTKS-IHPFVIKLGFNTEVYVASAVIDAY 594
           +    P+      +L++C+ +G      +Y R+ S  H  V K     E Y  + V+D  
Sbjct: 721 QLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPK----PEHY--ACVVDLL 774

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-AT 653
            + G +  A+   ++     D +V+ TL+ A   H  +   +  F    L  L+P   AT
Sbjct: 775 GRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNID--IGEFAASHLLELEPKDSAT 832

Query: 654 FVSV--MSACSHK 664
           +V V  M A S K
Sbjct: 833 YVLVSNMYAVSGK 845



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 203/418 (48%), Gaps = 28/418 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + +A  LS   ++ +   G Q H + +K G T+DI ++ +L+ +Y KC        
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F             +    + N   +   +++  M+  G +PN+F   S++K C ++GA
Sbjct: 409 FF-------------LCYGQLDN--LNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           ++ G  IH   LK   + N +V   +++ YAK G +  A ++F  +  +DV  W AMI G
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAG 513

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y       EALN+   M  +GI  D   F +A+  C+ +   D GRQIH     S     
Sbjct: 514 YTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDD 573

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +SI NAL+ +Y +   +  A+  F+++  KD +SWN+L  GF+++    +  ++F +   
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNK 633

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +G   N  TF   +     + ++ +G Q+  +    G+  E  V+++LI ++ +CG +  
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-- 691

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
                D++S      WN +++GY  + C  + LK F ++ +  V  N  TF  V+  C
Sbjct: 692 -----DDIS------WNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSAC 738



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 237/554 (42%), Gaps = 47/554 (8%)

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++FY   GD+  A  VF  +    + CWN +   +           +   ML + +
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV 159

Query: 243 TMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             D+  F   L+GCS  A  F    QIH   I S  E S  I N LID+Y K+  +  A 
Sbjct: 160 EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAK 219

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVFE +  +D +SW  +  G S+N    +   LF + +LS               C K+ 
Sbjct: 220 KVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSA--------------CTKVE 265

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             + G QL  L L  GF  E  V ++L+ ++ R G +  A  +F  +S ++  ++N L+S
Sbjct: 266 FFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLIS 325

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G          L  F  +     + +  T   ++  C          Q H   IK G +S
Sbjct: 326 GLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTS 385

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              +  SL+  YV    +  + EF     +LD               + +++  IF  + 
Sbjct: 386 DIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD---------------NLNKSFQIFTQMQ 430

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G  P+++   +IL +C  +GA    + IH  V+K GF   VYV+S +ID YAK G + 
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLD 490

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F +    NDV+ +  +I  Y  H   +EA+ +F +M+   ++     F S +SAC
Sbjct: 491 HALKIF-RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC 549

Query: 662 SHKGLVDKG-------CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +    +D+G       CL   S D   G          LV + +R G + +A    + + 
Sbjct: 550 AGIQALDQGRQIHAQSCLSGYSDDLSIG--------NALVSLYARCGKVREAYAAFDQI- 600

Query: 715 FQPSPTVYRSLLSG 728
           +      + SL+SG
Sbjct: 601 YAKDNVSWNSLVSG 614



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 27/299 (9%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  ++ D I  A ++S    +++   G Q+H      G+++D+ + N L+++Y++CG   
Sbjct: 532 DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVR 591

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
                FD++  ++ VSW  +VS   Q+G F+  L ++  M   G   N F  GS +    
Sbjct: 592 EAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAA 651

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           ++     G  IH    K   +    V  +++  YAK G +            DD+  WN+
Sbjct: 652 NIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI------------DDIS-WNS 698

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIH 269
           MI GY+  G GFEAL +   M    +  +  TF+  L  CS V   D G        + H
Sbjct: 699 MITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAH 758

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
            L+ + E    +      +D+  +S  +  A +  E M    D + W TL    + +KN
Sbjct: 759 NLVPKPEHYACV------VDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKN 811


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 213/697 (30%), Positives = 349/697 (50%), Gaps = 48/697 (6%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
             D++  N  +    K G  G    VFD M ER++VSW  ++S  ++ G  +  L +Y  
Sbjct: 35  VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 94

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG- 194
           M  +GF+P+ F + SV+  C  +    FG   H  A+K  ++KN FVG ++L+ YAK G 
Sbjct: 95  MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 154

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL- 253
            V    RVF S+S  +   + A+IGG A      EA+ +   M  +G+ +D     N L 
Sbjct: 155 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 214

Query: 254 -----QGCSLVADF---DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
                +GC  +++    ++G+QIH L +R      + + N+L+++Y K+  M+ A  +F 
Sbjct: 215 ISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFA 274

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M + +V+SWN +  GF +     ++     +   SG +PN VT   +L  C        
Sbjct: 275 EMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC-------- 326

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
                                       R G VE    +F ++   +++ WN +LSGY  
Sbjct: 327 ---------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 359

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
                + +  F  +    ++ +  T   ++ +C R    +   QIHG +I+T  S   +I
Sbjct: 360 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 419

Query: 486 CSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
            S LI  Y    +++ S   F +    LD+A W +M+S   H   + +A+ +F  + +  
Sbjct: 420 VSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 479

Query: 545 EK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              P+E    T+L+SC+ + +    +  H  V+K G+ ++ +V +A+ D Y KCG+I  A
Sbjct: 480 VLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSA 539

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD     N VI +N +I  Y H+G   EA+ ++ KM  +  +P   TFVSV++ACSH
Sbjct: 540 RQFFDAVLRKNTVI-WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSH 598

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV+ G  +  SM   +G++P  D Y C+VD L R G LEDA+ + E  P++ S  ++ 
Sbjct: 599 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 658

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            LLS CR+HG+  L    +EKL+ L P++ AA+VLLS
Sbjct: 659 ILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 695



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/619 (23%), Positives = 283/619 (45%), Gaps = 48/619 (7%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF-GWGLRVFDEM 105
           LA  LS    +   V G + HG  VK G   +IF+ N L++MY+KCG+   +G+RVF+ +
Sbjct: 107 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 166

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV------CVSMG 159
           ++ N VS+T ++    +  +    ++M+  M   G   +   + +++ +      C S+ 
Sbjct: 167 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 226

Query: 160 ---ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
               +E G  IHC AL++    +  +  S+L  YAK  D+  AE +F  +   +V  WN 
Sbjct: 227 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 286

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI G+       +++  ++ M   G   ++ T I+ L  C    D + GR+I        
Sbjct: 287 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI-------- 338

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                                      F  +    V +WN +  G+S  ++  +  S F 
Sbjct: 339 ---------------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 371

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +      +P+  T S++L  C +L  L+ G Q+  + +        ++ S LI ++  C 
Sbjct: 372 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE 431

Query: 397 AVEMAHSVFDN-VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYV 454
            +E++  +FD+ ++  +I  WN ++SG+  N  D   L  F  + ++ V   N  +F  V
Sbjct: 432 KMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATV 491

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           + +C R  +     Q HG ++K+G+ S  ++ ++L   Y   G++D++ +F +   R + 
Sbjct: 492 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 551

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
             W  M+    H G   EAV ++  ++ +GEKPD     ++L +C+  G  +    I   
Sbjct: 552 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSS 611

Query: 575 VIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           + ++ G   E+     ++D   + G ++ A    + +   +  +++  L+ +   HG VS
Sbjct: 612 MQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVS 671

Query: 634 EAMEIFDKMKLANLQPSQA 652
            A  + +K+   + Q S A
Sbjct: 672 LARRVAEKLMRLDPQSSAA 690



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 36/334 (10%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   L+  LS    L+    G Q+HG +++   + +  + + LIA+YS+C       
Sbjct: 378 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 437

Query: 100 RVFDE-MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVS 157
            +FD+ + E ++  W  ++S    N      L ++  M     + PNE +  +V+  C  
Sbjct: 438 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 497

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + +   G   H   +K     + FV  ++ + Y K G++ +A + F ++   +   WN M
Sbjct: 498 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 557

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHG 270
           I GY H G G EA+ +   M+  G   D  TF++ L  CS     + G       ++IHG
Sbjct: 558 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 617

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I  E++  I IV+ L        G     +  E++A+                  P +
Sbjct: 618 --IEPELDHYICIVDCL--------GRAGRLEDAEKLAE----------------ATPYK 651

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++S+  + +LS  R  H   S+  R   KL+ LD
Sbjct: 652 SSSVLWEILLSSCRV-HGDVSLARRVAEKLMRLD 684


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 200/719 (27%), Positives = 368/719 (51%), Gaps = 11/719 (1%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I  A ++S   +++S   G  +H  +++ GF +D+ +   ++ MY KCG       VF+ 
Sbjct: 205 ITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFER 264

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEF 163
           M   N VSW  IV+A  Q+G     L  +  M+   G  P++    +++  C S     F
Sbjct: 265 MPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTF 324

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  ++   L+   + +  VG  ++  Y+  G +  A   F ++   D   WN +I G+A 
Sbjct: 325 GELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQ 384

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  EA+++   ML EGIT DK+TFI+ + G + + +  I   +  L++ S VE  + +
Sbjct: 385 AGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKI---LSELMVESGVELDVFL 441

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           V+ALI+M+ +   +  A  +F+ M D+D++ W ++   + ++ +            L G 
Sbjct: 442 VSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGL 501

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             N  T    L  C  L  L  G  +   A+  GF     V ++LI M+ +CG +E A  
Sbjct: 502 MGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADL 561

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF     KN+ +WN + + Y       + L+ F  +   G++ +  +F  V+  C  +  
Sbjct: 562 VFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSSASE 620

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
                +IH  +++TG  S   + ++L+  Y     LD +    +  E  D+ SW AM++ 
Sbjct: 621 GS---KIHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAG 677

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN--SCAAIGAYQRTKSIHPFVIKLGFN 581
               G + EA+ +F  +   G  PD+    T+LN  S ++  + ++ + +   +   G+ 
Sbjct: 678 KAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYE 737

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           T+  V +A++  + + G +  AR AF++     D   +N ++ A+A HG V +A+++F +
Sbjct: 738 TDTIVGNAIVSMFGRSGRLAEARRAFER-IRERDAASWNVIVTAHAQHGEVEQALKLFRR 796

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+  + +P   T VSV+SACSH GL+++G   F SM  ++G+  S + YGC+VD+L+R G
Sbjct: 797 MQQESSRPDSITLVSVLSACSHGGLIEEGYYHFTSMGREFGIAGSQEHYGCVVDLLARAG 856

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            L+ A+ ++  MP   S  ++ +LLS C++ G+++  +  +E+++ L P+  AA+V+LS
Sbjct: 857 RLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRVAERVMELDPRRPAAYVVLS 915



 Score =  266 bits (680), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 173/673 (25%), Positives = 326/673 (48%), Gaps = 13/673 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +    F  D  +QN  I MY KCG     + VF  +   + VSW  +++A  +
Sbjct: 21  GRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQVSWNSLLAAFAR 80

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+F    +++  MK  G  P+     +V+  C + G    G  +H F L+  +E+N  V
Sbjct: 81  DGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMV 140

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++  Y K G V  A RVF  ++  DV  W +MI  Y       EAL +   M   G+
Sbjct: 141 GTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGV 200

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ T+  A+  C+ V     G+ IH  ++    E  + +  A+++MY K   ++ A +
Sbjct: 201 LPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDARE 260

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLL 361
           VFERM   + +SWN +    +++    +    F +  L  GS P+ VTF  +L  C    
Sbjct: 261 VFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPA 320

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G  L    L CG+     V + ++ M+  CG ++ A + F  +  ++  +WN ++S
Sbjct: 321 TLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIIS 380

Query: 422 GYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           G+     CD + +  F  +   G+  +  TF  +++   R +  +++ ++   ++++G  
Sbjct: 381 GHAQAGFCD-EAVHLFRRMLAEGITPDKFTFISIIDGTARMQEAKILSEL---MVESGVE 436

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ S+LI  +  +G +  +    +  +  D+  W +++S+ V  G + +A+     +
Sbjct: 437 LDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLM 496

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G   +++ L T LN+CA++ A    K IH   I+ GF     V +A+I+ YAKCG +
Sbjct: 497 RLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCL 556

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A + F Q     +++ +NT+  AY       EA+++F +M+L  L+  + +FV+V++ 
Sbjct: 557 EEADLVFHQC--GKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNG 614

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CS      K      ++  + GM+        L++M + +  L++A  +   M F+   +
Sbjct: 615 CSSASEGSK----IHNILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVS 670

Query: 721 VYRSLLSGCRIHG 733
            + ++++G   HG
Sbjct: 671 -WNAMIAGKAEHG 682



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 276/561 (49%), Gaps = 6/561 (1%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++ +C    A   G  +H         ++  V  + ++ Y K G V  A  VF S+   
Sbjct: 7   ALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHP 66

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               WN+++  +A  G   +A  +   M  +G+  D+ TF+  L GC+   D   G+ +H
Sbjct: 67  SQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGKLLH 126

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G ++ + +E ++ +  +LI MY K   ++ A +VF+++A +DV+SW ++   + ++    
Sbjct: 127 GFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHDRCV 186

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LFH+   SG  PN +T++  +  C  +  +  G  +    L  GF  +  V+ +++
Sbjct: 187 EALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAIV 246

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNG 448
            M+ +CG++E A  VF+ + + N  +WN +++    + C  + L  F  +  + G   + 
Sbjct: 247 NMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGSTPDK 306

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            TF  ++  C           ++  I++ G+ +   + + ++  Y + G++DN+  F + 
Sbjct: 307 VTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFST 366

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D  SW  ++S     G   EAV +F  ++  G  PD++   +I++  A +   Q  
Sbjct: 367 MVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARM---QEA 423

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K +   +++ G   +V++ SA+I+ +++ G+++ AR  FD      D++++ ++I +Y  
Sbjct: 424 KILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDD-MKDRDIVMWTSIISSYVQ 482

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG   +A+     M+L  L  +  T V+ ++AC+    + +G L+  S   + G   SP 
Sbjct: 483 HGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLI-HSHAIERGFAASPA 541

Query: 689 CYGCLVDMLSRNGYLEDAKHV 709
               L++M ++ G LE+A  V
Sbjct: 542 VGNALINMYAKCGCLEEADLV 562



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 230/493 (46%), Gaps = 7/493 (1%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+ TF+  L  C+  +    GR +H  +  SE      + NA I MY K   ++ A  VF
Sbjct: 1   DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +     +SWN+L   F+ +    Q   +F +  L G  P+ +TF  +L  C    DL 
Sbjct: 61  QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLS 120

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  L    L  G      V +SLI M+ +CG VE A  VFD ++ +++ +W  ++  Y 
Sbjct: 121 RGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYV 180

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L+ F  +  SGV  N  T+   +  C   E+      IH  +++ GF S   
Sbjct: 181 QHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVV 240

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEA 543
           +  +++  Y   G L+++ E        +  SW A+++A    G   EA+  F  + ++ 
Sbjct: 241 VSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQG 300

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD+    TILN+C++       + ++  +++ G++T + V + ++  Y+ CG I  A
Sbjct: 301 GSTPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNA 360

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AF  +    D I +NT+I  +A  G   EA+ +F +M    + P + TF+S++   + 
Sbjct: 361 -AAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTAR 419

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
                +   +   +  + G++        L++M SR G + +A+ + + M       ++ 
Sbjct: 420 M----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMK-DRDIVMWT 474

Query: 724 SLLSGCRIHGNKE 736
           S++S    HG+ +
Sbjct: 475 SIISSYVQHGSSD 487


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 214/757 (28%), Positives = 381/757 (50%), Gaps = 48/757 (6%)

Query: 11   ADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIF----LAKSLSLSENLKSRVLGTQV 66
            ADK    FH     + RL     F S +     P+F    L+ S S +E+L         
Sbjct: 705  ADKARDGFH-----LFRLL-RRSFVSATRHTLAPVFKMCLLSASPSAAESL--------- 749

Query: 67   HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
            HG+ VK+G   D+F+   L+ +Y+K G       +FD M  R++V W +++ A +  G  
Sbjct: 750  HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809

Query: 127  DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
               L ++ +    G  P++  + ++ +V                   ++ ++N      V
Sbjct: 810  YEALLLFSEFNRTGLRPDDVTLCTLARV-------------------VKSKQN------V 844

Query: 187  LNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            L +  K       +   Y       DV  WN  +  +   G  +EA++    M+   +  
Sbjct: 845  LEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904

Query: 245  DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
            D  TF+  L   + +   ++G+QIHG+++RS ++  +S+ N LI+MY+K+  +  A  VF
Sbjct: 905  DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964

Query: 305  ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD-L 363
             +M + D++SWNT+  G + +     +  +F   +  G  P+  T + +LR C  L    
Sbjct: 965  WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC 1024

Query: 364  DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             L  Q+   A+  G + +  V+++LI ++ + G +E A  +F N    ++ +WN ++ GY
Sbjct: 1025 HLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGY 1084

Query: 424  CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
              +      L+ +  + ESG   N  T     +        +   QI   ++K GF+   
Sbjct: 1085 IVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDL 1144

Query: 484  YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            ++ S ++  Y+  G+++++    N     D  +W  M+S  V  G    A+  +H +  +
Sbjct: 1145 FVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLS 1204

Query: 544  GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              +PDEY   T++ +C+ + A ++ + IH   +KL    + +V ++++D YAKCG+I+ A
Sbjct: 1205 KVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA 1264

Query: 604  RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            R  F ++ N++ +  +N +I+  A HG   EA++ F++MK   + P + TF+ V+SACSH
Sbjct: 1265 RGLFKRT-NTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSH 1323

Query: 664  KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
             GLV +    F SM   YG++P  + Y CLVD LSR G + +A+ VI  MPF+ S ++YR
Sbjct: 1324 SGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYR 1383

Query: 724  SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL+ CR+  ++E G+  +EKLL L P + AA+VLLS
Sbjct: 1384 TLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1420



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 178/689 (25%), Positives = 319/689 (46%), Gaps = 53/689 (7%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSA 119
            LG + H  I+  G   D FL NNLI MYSKCG      ++FD   +  R+LV+W  I+SA
Sbjct: 644  LGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSA 703

Query: 120  AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
                     G  ++  ++ +        +  V K+C+   +     S+H +A+KI ++ +
Sbjct: 704  HADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWD 761

Query: 180  PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             FV  +++N YAK G +  A  +F  +   DV  WN M+  Y   G  +EAL + S    
Sbjct: 762  VFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNR 821

Query: 240  EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE---VECSISIVNALIDMYIKSSG 296
             G+  D  T       C+L             +++S+   +E  +  + A          
Sbjct: 822  TGLRPDDVTL------CTLAR-----------VVKSKQNVLEWQLKQLKA---------- 854

Query: 297  MDYAFKVF---ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              Y  K+F   +     DVI+WN     F +     +    F   I S    + +TF ++
Sbjct: 855  --YGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVM 912

Query: 354  LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            L     L  L+LG Q+  + +  G     +V + LI M+ + G+V  A +VF  ++  ++
Sbjct: 913  LSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDL 972

Query: 414  TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ-QMVGQIHG 472
             +WN ++SG   +  +   +  F ++   G+  +  T   V+  C        +  QIH 
Sbjct: 973  VSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHA 1032

Query: 473  AIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNH 531
              +K G     ++ ++LI  Y   G+++ + F F N  +  D+ASW AMM   +  G   
Sbjct: 1033 CAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVN-QDGFDLASWNAMMHGYIVSGDFP 1091

Query: 532  EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            +A+ ++  + E+GE+ ++  L     +   +   ++ K I   V+K GFN +++V S V+
Sbjct: 1092 KALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVL 1151

Query: 592  DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            D Y KCG+++ AR  F++   S D + + T+I     +G    A+  +  M+L+ +QP +
Sbjct: 1152 DMYLKCGEMESARRIFNE-IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDE 1210

Query: 652  ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             TF +++ ACS    +++G  +  +   +      P     LVDM ++ G +EDA+ +  
Sbjct: 1211 YTFATLVKACSLLTALEQGRQIHANT-VKLNCAFDPFVMTSLVDMYAKCGNIEDARGL-- 1267

Query: 712  IMPFQPSPT----VYRSLLSGCRIHGNKE 736
               F+ + T     + +++ G   HGN E
Sbjct: 1268 ---FKRTNTSRIASWNAMIVGLAQHGNAE 1293



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 130/620 (20%), Positives = 268/620 (43%), Gaps = 40/620 (6%)

Query: 128  MGLKMYVDMKT-NGFMPNEFAVGSV------MKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            M L++     T N F+P    + S+      ++  ++      G   H   L      + 
Sbjct: 602  MHLRLRAATSTANPFIPPAHLIHSIPQWFSILRHAIAASDLPLGKRAHARILTSGHHPDR 661

Query: 181  FVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
            F+  +++  Y+K G +++A ++F +   +S D+  WNA++   AH     +  ++   + 
Sbjct: 662  FLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILS--AHADKARDGFHLFRLLR 719

Query: 239  FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
               ++  ++T     + C L A       +HG  ++  ++  + +  AL+++Y K   + 
Sbjct: 720  RSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIR 779

Query: 299  YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
             A  +F+ M  +DV+ WN +   + +     +   LF +F  +G RP+ VT   L R   
Sbjct: 780  EARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVK 839

Query: 359  KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               ++ L  QL+ L  +         T   +Y     G+              ++  WN+
Sbjct: 840  SKQNV-LEWQLKQLKAYG--------TKLFMYDDDDDGS--------------DVIAWNK 876

Query: 419  LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
             LS +       + +  F ++  S V  +G TF  ++         ++  QIHG ++++G
Sbjct: 877  TLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSG 936

Query: 479  FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                  + + LI  YV  G +  +         +D+ SW  M+S     G    +V +F 
Sbjct: 937  LDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFV 996

Query: 539  SLVEAGEKPDEYILGTILNSCAAIGAY-QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             L+  G  PD++ + ++L +C+++G        IH   +K G   + +V++ +ID Y+K 
Sbjct: 997  DLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKS 1056

Query: 598  GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            G ++ A   F    +  D+  +N ++  Y   G   +A+ ++  M+ +  + +Q T  + 
Sbjct: 1057 GKMEEAEFLFVNQ-DGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANA 1115

Query: 658  MSACSHKGLVD-KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
              A    GLV  K     +++  + G          ++DM  + G +E A+ +   +P  
Sbjct: 1116 AKAAG--GLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP-S 1172

Query: 717  PSPTVYRSLLSGCRIHGNKE 736
            P    + +++SGC  +G +E
Sbjct: 1173 PDDVAWTTMISGCVENGQEE 1192


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 210/732 (28%), Positives = 367/732 (50%), Gaps = 23/732 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I L  +L+  E  ++   G  +HG I + G   D+ L+N L++MY  CG      
Sbjct: 97  VKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAK 156

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVFD M  RN+++WT ++ A  +    +   K++  M+  GF  N     ++++ C    
Sbjct: 157 RVFDAMPARNVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPE 215

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  +H  +++        +  +++  Y + G +  A  +F S+   D+  WNA+I 
Sbjct: 216 FLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALIT 275

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL---QGCSLVADFDIGRQIHGLIIRSE 276
            Y   G+  EA+ +   ML EG   DK TF+  L    G   + D  +   +H  I+ S 
Sbjct: 276 EYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKL---VHSHIVESG 332

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           V  +I++  AL+ MY K   ++    +FE+M  ++VISWN +   ++++    +   +  
Sbjct: 333 VSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITE 392

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS------SLIY 390
              L G +P++VT   LL  C    DL LG ++       G++ E    +      SL+ 
Sbjct: 393 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVH------GWIAEGRCEADLILWNSLLN 446

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ RCG VE A  VFD +  +N+ +W  +L+ Y         L  F  I  SGV+    T
Sbjct: 447 MYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCIT 506

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGA 509
           F   ++ C  +E       +H   +++G  +   + S+L+  Y   G + D    F +  
Sbjct: 507 FLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTE 566

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
            R +  +W AM++A V  G + E +     + + G         + L++C+ +   +  K
Sbjct: 567 VRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGK 626

Query: 570 SIHPFVIKLGFNTEV-YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
            IH +V +  F+TE   V ++++  Y KCG +  AR  F+ S    D+I +N +I  YA 
Sbjct: 627 RIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETS-RRQDIICWNAIISGYAQ 685

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG   +A+E+F +M+   + P   TFV ++S CSH GL+D+G   + SM  + G++P+ D
Sbjct: 686 HGQTRDAVELFHRMQQEGVTPDPVTFVCILSVCSHGGLLDEGVYAYASM-VELGLEPTQD 744

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C++D+L R G L++A+  I+ +  +P+     SLLS C+ HG+ + G  A+E ++ +
Sbjct: 745 NYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEM 804

Query: 749 LPKNDAAHVLLS 760
            P++ +AHV+LS
Sbjct: 805 DPRSSSAHVVLS 816



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 161/687 (23%), Positives = 317/687 (46%), Gaps = 8/687 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L     LK+  +  ++H  IV+    N +FL N+LI  Y KC         F+ M+ +N+
Sbjct: 7   LQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 66

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +WT I+     +    + + +   M   G  P+   + + +  C +  A   G  IH  
Sbjct: 67  YTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHGL 126

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             +   + +  +  ++++ Y   G V  A+RVF ++ + +V  W AMIG +A      +A
Sbjct: 127 IAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSLE-QA 185

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
             V   M  EG   +  T++  +Q CS     ++G  +H   + S       + NALI M
Sbjct: 186 FKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITM 245

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y +   ++ A  +F  M ++D+I+WN L   + ++ +  +   L+   +  G +P+ VTF
Sbjct: 246 YGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTF 305

Query: 351 SILLRQCG---KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
             LL        L D+ L   +    +  G      + ++L+ M+ +C ++E    +F+ 
Sbjct: 306 VALLTMSNGPEALTDVKL---VHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEK 362

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  +N+ +WN +++ Y  +      ++    +   GV+ +  T   ++  C  S + ++ 
Sbjct: 363 MPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLG 422

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            ++HG I +    +   + +SL+  Y   G+++ +    +G  + ++ SW AM++A   Q
Sbjct: 423 RKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQ 482

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
                A+ +FH++  +G KP        L++C    A  + + +H   ++ G +T+V + 
Sbjct: 483 NRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLG 542

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA++  Y +CG I+ A+  FD +    + + ++ +I A+  HG   E ++    M+   L
Sbjct: 543 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGL 602

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
             S ATF S +SACS+   + +G  +   +  +     +      LV M  + G L+ A+
Sbjct: 603 DMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAR 662

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            V E    Q     + +++SG   HG 
Sbjct: 663 EVFETSRRQ-DIICWNAIISGYAQHGQ 688



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 274/588 (46%), Gaps = 3/588 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C  + A +    +H   ++  ++   F+G  +++ Y K   +  A   F  +S  +
Sbjct: 6   LLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 65

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A+IG  AH      A+ ++  ML EG+  D  T + AL  C        G+ IHG
Sbjct: 66  VYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKLIHG 125

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           LI +S  +C + + NAL+ MY     +D A +VF+ M  ++VI+W  + G  +E  +  Q
Sbjct: 126 LIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAET-SLEQ 184

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +F    L G + N VT+  L++ C K   L++G+ L   ++      E  + ++LI 
Sbjct: 185 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 244

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ RCG +E A ++F ++  ++I  WN L++ Y  +    + +  +  + + G + +  T
Sbjct: 245 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 304

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++      E    V  +H  I+++G S    + ++L+  Y     L+++        
Sbjct: 305 FVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 364

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           + ++ SW  M++A    G   +AV I   +   G KPD      +LN C      +  + 
Sbjct: 365 QRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRK 424

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H ++ +     ++ + +++++ Y +CG+++ A M FD     N VI +  ++ AY+   
Sbjct: 425 VHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRN-VISWTAMLTAYSRQN 483

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
               A+ +F  + L+ ++P+  TF+  + AC     + KG  L  S   Q G        
Sbjct: 484 RQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKG-RLVHSCAVQSGNDTDVSLG 542

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             LV M  R G + DAK   +    + +   + ++++    HG    G
Sbjct: 543 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREG 590



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 229/470 (48%), Gaps = 17/470 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           ++  LQ C  +   DI R++H  I+R+ ++  + + N LI  Y K   +D A++ FERM+
Sbjct: 3   YVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMS 62

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            K+V +W  + G  + +        L  + +L G +P+++T    L  C     L  G  
Sbjct: 63  YKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAGKL 122

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  L    G   +  + ++L+ M+  CG+V+ A  VFD +  +N+ TW  ++  +     
Sbjct: 123 IHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAETSL 182

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           +    K F  +   G + N  T+  +V+ C + E  ++   +H   +++  +    +C++
Sbjct: 183 E-QAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNA 241

Query: 489 LIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           LI  Y   G+L+++   FS+  ER D+ +W A+++     GH  EAV ++  +++ G KP
Sbjct: 242 LITMYGRCGRLEDARAIFSSMVER-DIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKP 300

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D+     +L       A    K +H  +++ G +  + + +A++  Y+KC  ++  R  F
Sbjct: 301 DKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLF 360

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           ++    N VI +N ++ AYA HGL  +A++I + M+L  ++P   T V +++ C+     
Sbjct: 361 EKMPQRN-VISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCT----- 414

Query: 668 DKGCLLFKSMDSQYGMQPSPDC------YGCLVDMLSRNGYLEDAKHVIE 711
             G    K     +G      C      +  L++M  R G +E A+ V +
Sbjct: 415 --GSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFD 462



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 168/368 (45%), Gaps = 5/368 (1%)

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           V +  LL+ C KL  LD+  +L    +     +   + + LI+ + +C +++ A   F+ 
Sbjct: 1   VEYVRLLQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFER 60

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +SYKN+ TW  ++     + C +  +     +   GV+ +  T    + +C  S+     
Sbjct: 61  MSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLEGVKPDNITLLAALTSCETSQALPAG 120

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             IHG I ++G      + ++L+  Y + G +D++    +     ++ +W AM+ A   +
Sbjct: 121 KLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHA-E 179

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               +A  +F  +   G K +     T++ +C+     +    +H   ++     E  + 
Sbjct: 180 TSLEQAFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLC 239

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+I  Y +CG ++ AR  F  S    D+I +N LI  Y  HG V EA+ ++  M     
Sbjct: 240 NALITMYGRCGRLEDARAIFS-SMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGC 298

Query: 648 QPSQATFVSVMSACS-HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           +P + TFV++++  +  + L D    L  S   + G+  +      LV M S+   LED 
Sbjct: 299 KPDKVTFVALLTMSNGPEALTD--VKLVHSHIVESGVSINIALGTALVAMYSKCESLEDT 356

Query: 707 KHVIEIMP 714
           + + E MP
Sbjct: 357 RWLFEKMP 364


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 214/752 (28%), Positives = 372/752 (49%), Gaps = 39/752 (5%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P+F+A + + + + +  +   Q H    + G  +D+ + N  I  Y KC       RVFD
Sbjct: 41  PVFMAVAKACAAS-RDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFD 99

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           ++  R++V+W  + +  +  G    GL ++  M  N    N   V S++  C  +   + 
Sbjct: 100 DLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKS 159

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  IH F ++  + ++ FV  + +NFYAK   V  A+ VF  +   DV  WN++   Y +
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVN 219

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
           CG+  + LNV   M+ +G+  D  T    L  CS + D   G+ IHG  ++  +  ++ +
Sbjct: 220 CGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFV 279

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+++Y     +  A  VF+ M  ++VI+WN+L   +     P +  ++F +  L+G 
Sbjct: 280 SNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGV 339

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           +P+ +  S +L  C +L DL  G  +   A+  G +++  V ++L+ ++  C  V  A +
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQT 399

Query: 404 VFDNVSYKNITTWNELLSGYCFNCC-DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           VFD + ++N+ TWN L S Y  NC      L  F  +  +GV+ +  T   ++  C   +
Sbjct: 400 VFDLMPHRNVVTWNSLSSCY-VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF----------------------GQLD 500
           + +    IHG  ++ G     ++C++L+  Y                         G L 
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518

Query: 501 NSF---EFSNG----------AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
             F   E+  G            + D  +W  ++   V      EA+ IF  +   G KP
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKP 578

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           DE  + +IL +C+     +  K IH +V +   + ++   +A++D YAKCG +  +R  F
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVF 638

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D      DV  +NT+I A   HG   EA+ +F+KM L+ ++P  ATF  V+SACSH  LV
Sbjct: 639 DM-MPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLV 697

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           ++G  +F SM   + ++P  + Y C+VD+ SR G LE+A   I+ MP +P+   +++ L+
Sbjct: 698 EEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           GCR++ N EL + +++KL  + P   A +V L
Sbjct: 758 GCRVYKNVELAKISAKKLFEIDPNGSANYVTL 789



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 171/677 (25%), Positives = 319/677 (47%), Gaps = 46/677 (6%)

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  I +G  +  +K+Y   +  G  P++    +V K C +   +      H  A +  + 
Sbjct: 13  SFGIPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVM 72

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +G + ++ Y K   V  A RVF  + + DV  WN++   Y +CG+  + LNV   M
Sbjct: 73  SDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKM 132

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
               +  +  T  + L GCS + D   G++IHG ++R  +   + + +A ++ Y K   +
Sbjct: 133 GLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCV 192

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A  VF+ M  +DV++WN+L   +     P +  ++F + +L G +P+ VT S +L  C
Sbjct: 193 REAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L DL  G  +   AL  G ++   V+++L+ ++  C  V  A +VFD + ++N+ TWN
Sbjct: 253 SDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWN 312

Query: 418 ELLSGYCFNCC-DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
            L S Y  NC      L  F  +  +GV+ +      ++  C + ++ +    IHG  +K
Sbjct: 313 SLASCY-VNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK 371

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G     ++C++L+  Y N   +  +    +     ++ +W ++ S  V+ G   + + +
Sbjct: 372 HGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNV 431

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +V  G KPD   + +IL++C+ +   +  K IH F ++ G   +V+V +A++  YAK
Sbjct: 432 FREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAK 491

Query: 597 CGDIKGARMAFD-------QSFN---------------------------SNDVIVYNTL 622
           C  ++ A++ FD        S+N                             D I ++ +
Sbjct: 492 CVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVV 551

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMD 678
           I     +  + EAMEIF KM+    +P + T  S++ ACS    +  G    C +F+   
Sbjct: 552 IGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWK 611

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
                + +      LVDM ++ G L  +++V ++MP +   + + +++    +HGN +  
Sbjct: 612 DWDLARTNA-----LVDMYAKCGGLSLSRNVFDMMPIKDVFS-WNTMIFANGMHGNGKEA 665

Query: 739 EWASEKLLLLLPKNDAA 755
               EK+LL + K D+A
Sbjct: 666 LSLFEKMLLSMVKPDSA 682



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 255/556 (45%), Gaps = 35/556 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +P+ ++  L    +L+    G ++HG +V+ G   D+F+ +  +  Y+KC       
Sbjct: 137 VKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQ 196

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD M  R++V+W  + S  +  G    GL ++ +M  +G  P+   V  ++  C  + 
Sbjct: 197 TVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G +IH FALK  + +N FV  +++N Y     V  A+ VF  +   +V  WN++  
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y +CG+  + LNV   M   G+  D     + L  CS + D   G+ IHG  ++  +  
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  AL+++Y     +  A  VF+ M  ++V++WN+L   +     P +  ++F + +
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L+G +P+ VT   +L  C  L DL  G  +   A+  G +++  V ++L+ ++ +C  V 
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVR 496

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFN-------------------------------CC 428
            A  VFD + ++ + +WN +L+ Y  N                               C 
Sbjct: 497 EAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCV 556

Query: 429 D----ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                 + ++ F  +   G + +  T + ++  C  SE  +M  +IH  + +        
Sbjct: 557 KNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLA 616

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             ++L+  Y   G L  S    +     D+ SW  M+ A    G+  EA+++F  ++ + 
Sbjct: 617 RTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSM 676

Query: 545 EKPDEYILGTILNSCA 560
            KPD      +L++C+
Sbjct: 677 VKPDSATFTCVLSACS 692


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 197/666 (29%), Positives = 350/666 (52%), Gaps = 10/666 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFDEM +R   +W  ++ A + NGE    L +Y +M+  G      +  +++K C  + 
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMI 218
               G  +H   +K+      F+  ++++ YAK  D++AA R+F       D   WN+++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y+  G   E L +   M   G   + YT ++AL  C   +   +G++IH  +++S   
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279

Query: 279 CS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
            S + + NALI MY +   M  A ++  +M + DV++WN+L  G+ +N    +    F  
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 339

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            I +G + + V+ + ++   G+L +L  G++L    +  G+     V ++LI M+ +C  
Sbjct: 340 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 399

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
                  F  +  K++ +W  +++GY  N C  + L+ F ++ +  +E++      ++  
Sbjct: 400 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 459

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDM 514
               ++  +V +IH  I++ G      I + L+  Y    N G     FE   G    D+
Sbjct: 460 SSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVFESIKGK---DV 515

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW +M+S+    G+  EAV +F  +VE G   D   L  IL++ A++ A  + + IH +
Sbjct: 516 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 575

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +++ GF  E  +A AV+D YA CGD++ A+  FD+      ++ Y ++I AY  HG    
Sbjct: 576 LLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDR-IERKGLLQYTSMINAYGMHGCGKA 634

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+E+FDKM+  N+ P   +F++++ ACSH GL+D+G    K M+ +Y ++P P+ Y CLV
Sbjct: 635 AVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLV 694

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           DML R   + +A   +++M  +P+  V+ +LL+ CR H  KE+GE A+++LL L PKN  
Sbjct: 695 DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG 754

Query: 755 AHVLLS 760
             VL+S
Sbjct: 755 NLVLVS 760



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 234/503 (46%), Gaps = 3/503 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
           G+++H  +VKLG+ +  F+ N L++MY+K        R+FD   E+ + V W  I+S+  
Sbjct: 164 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 223

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +G+    L+++ +M   G  PN + + S +  C     ++ G  IH   LK     +  
Sbjct: 224 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 283

Query: 182 VGCSVL-NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
             C+ L   Y + G +  AER+   +++ DV  WN++I GY       EAL   S M+  
Sbjct: 284 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 343

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   D+ +  + +     +++   G ++H  +I+   + ++ + N LIDMY K +   Y 
Sbjct: 344 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 403

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            + F RM DKD+ISW T+  G+++N    +   LF          + +    +LR    L
Sbjct: 404 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 463

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             + +  ++ C  L  G LD   + + L+ ++ +C  +  A  VF+++  K++ +W  ++
Sbjct: 464 KSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 522

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S    N  +++ ++ F  + E+G+  +      ++             +IH  +++ GF 
Sbjct: 523 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 582

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             G I  +++  Y   G L ++    +  ER  +  + +M++A    G    AV +F  +
Sbjct: 583 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 642

Query: 541 VEAGEKPDEYILGTILNSCAAIG 563
                 PD      +L +C+  G
Sbjct: 643 RHENVSPDHISFLALLYACSHAG 665



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 194/398 (48%), Gaps = 2/398 (0%)

Query: 62  LGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG ++H  ++K    ++++++ N LIAMY++CG      R+  +M   ++V+W  ++   
Sbjct: 265 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 324

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +QN  +   L+ + DM   G   +E ++ S++     +     G  +H + +K   + N 
Sbjct: 325 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 384

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG ++++ Y+K        R F  +   D+  W  +I GYA      EAL +   +  +
Sbjct: 385 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 444

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            + +D+    + L+  S++    I ++IH  I+R  +  ++ I N L+D+Y K   M YA
Sbjct: 445 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYA 503

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VFE +  KDV+SW ++    + N N  +   LF + + +G   + V    +L     L
Sbjct: 504 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 563

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G ++ C  L  GF  E ++  +++ M+  CG ++ A +VFD +  K +  +  ++
Sbjct: 564 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 623

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + Y  + C    ++ F  +    V  +  +F  ++  C
Sbjct: 624 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 661



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 1/326 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + +   ++ S  L + + G ++H +++K G+ +++ + N LI MYSKC    +  R
Sbjct: 346 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 405

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F  M +++L+SWT +++   QN      L+++ D+       +E  +GS+++    + +
Sbjct: 406 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 465

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
                 IHC  L+  +  +  +   +++ Y K  ++  A RVF SI   DV  W +MI  
Sbjct: 466 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 524

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   EA+ +   M+  G++ D    +  L   + ++  + GR+IH  ++R      
Sbjct: 525 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 584

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            SI  A++DMY     +  A  VF+R+  K ++ + ++   +  +        LF K   
Sbjct: 585 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 644

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
               P+H++F  LL  C     LD G
Sbjct: 645 ENVSPDHISFLALLYACSHAGLLDEG 670


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 183/575 (31%), Positives = 302/575 (52%), Gaps = 1/575 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ ++K G +  A RVF  I       ++ M+ GYA       AL  +  M ++ +   
Sbjct: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            Y F   L+ C   AD   G++IHG +I +    ++  +  +++MY K   +D A+K+F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM ++D++SWNT+  GFS+N    +   L  +    G RP+ +T   +L     +  L +
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A+  GF    N++++L  M+ +CG+VE A  +FD +  K + +WN ++ GY  
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N      +  F  + E G++  G T    +  C    + +    +H  + +    S   +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SLI  Y    ++D + +  N        SW AM+      G   EA+  F  +   G 
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KPD + + +++ + A +   +  K IH  +I+   +  ++V +A++D Y+KCG I  AR 
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD   +   VI +N +I  Y  HGL   A+++FDKMK   ++P+  T++SV+SACSH G
Sbjct: 507 LFDM-ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG 565

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LVD+G   FKSM   YG++PS D YG +VD+L R G +++A   IE MP  P  TVY ++
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAM 625

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  C+IH N E+GE A++KL  L P     HVLL+
Sbjct: 626 LGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 195/399 (48%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG ++   F  ++F    ++ MY+KC       ++FD M ER+LVSW  I++   Q
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     L++ + M+  G  P+   + +V+     +G    G SIH +A++    K   +
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++ + Y+K G V  A  +F  +    V  WN+M+ GY   G   +A+ V   ML EGI
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T + AL  C+ + D + G+ +H  + +  +   IS++N+LI MY K   +D A  
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  +  +  +SWN +  G+++N    +  + F +    G +P+  T   ++    +L  
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSV 465

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
                 +  L +         VT++L+ M+ +CGA+ MA  +FD +S +++ TWN ++ G
Sbjct: 466 TRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDG 525

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           Y  +      L  F  + +  VE N  T+  V+  C  S
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 278/629 (44%), Gaps = 9/629 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   ++K G  N+   Q  L++++SK G      RVF+ + ++    +  ++    +N 
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L     M+ +   P  +    ++KVC      + G  IH   +      N F   
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            V+N YAK   +  A ++F  +   D+  WN +I G++  G+  +AL +V  M  EG   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T +  L   + V    +G+ IHG  IR+     ++I  AL DMY K   ++ A  +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M  K V+SWN++  G+ +N  P +  ++F K +  G  P  VT    L  C  L DL+
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +           + +V +SLI M+ +C  V++A  +F+N++ +   +WN ++ GY 
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYA 426

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N   ++ L  F  +   G++ +  T   V+         +    IHG II++      +
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G +  + +  +      + +W AM+      G    A+ +F  + +  
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546

Query: 545 EKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
            +P++    +++++C+  G      +         G    +    A++D   + G IK A
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM--KLANLQPSQATF-VSVMSA 660
               +    S  + VY  ++ A   H    + +E+ +K   KL  L P +  + V + + 
Sbjct: 607 WDFIENMPISPGITVYGAMLGACKIH----KNIEVGEKAAKKLFELNPDEGGYHVLLANI 662

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +      K   + K+M+ + G++ +P C
Sbjct: 663 YASTSKWSKVAEVRKTMEKK-GLKKTPGC 690



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 187/390 (47%), Gaps = 3/390 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D   R D I L   L  + ++   ++G  +HG+ ++ GF   + +   L  MYSKCG   
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +FD M ++ +VSW  ++   +QNGE +  + ++  M   G  P    +   +  C 
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G  E G  +H F  ++ +  +  V  S+++ Y+K   V  A  +F +++      WNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GYA  G   EALN  S M   G+  D +T ++ +   + ++     + IHGLIIRS 
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           ++ +I +  AL+DMY K   +  A K+F+ ++D+ VI+WN +  G+  +        LF 
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRC 395
           K       PN +T+  ++  C     +D GL+  + +    G     +   +++ +  R 
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600

Query: 396 GAVEMAHSVFDNVSY-KNITTWNELLSGYC 424
           G ++ A    +N+     IT +  +L G C
Sbjct: 601 GRIKEAWDFIENMPISPGITVYGAML-GAC 629



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 226/478 (47%), Gaps = 25/478 (5%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QI  L+I++ +         L+ ++ K   ++ A +VFE + DK    ++T+  G+++N 
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +     +   +      +P    F+ LL+ CG   DL  G ++    +   F       +
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            ++ M+ +C  ++ A+ +FD +  +++ +WN +++G+  N      L+    + + G   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 447 NGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           +  T   V+          MVG+ IHG  I+ GF+    I ++L   Y   G ++ +   
Sbjct: 247 DSITLVTVLPAAA-DVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +G ++  + SW +MM   V  G   +A+ +F  ++E G  P    +   L++CA +G  
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +R K +H FV +L   +++ V +++I  Y+KC  +  A   F+ + N    + +N +I+ 
Sbjct: 366 ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN-NLNGRTHVSWNAMILG 424

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH----------KGLVDKGCLLFK 675
           YA +G VSEA+  F +MK   ++P   T VSV+ A +            GL+ + CL   
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL--- 481

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
             D    +  +      LVDM S+ G +  A+ + +++  +   T + +++ G   HG
Sbjct: 482 --DKNIFVTTA------LVDMYSKCGAIHMARKLFDMISDRHVIT-WNAMIDGYGTHG 530



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 178/368 (48%), Gaps = 8/368 (2%)

Query: 335 FHKFILSGSRPNHV---TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           FH        P+HV     ++LL  C  + +L    Q+  L +  G  +E    + L+ +
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           F + G++  A  VF+ +  K    ++ +L GY  N      L   C +    V+     F
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
            Y+++ C  + + +   +IHG +I   F++  +  + ++  Y    Q+D++++  +    
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ SW  +++     G   +A+ +   + + G++PD   L T+L + A +G     KSI
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H + I+ GF   V +++A+ D Y+KCG ++ AR+ FD   +   V+ +N+++  Y  +G 
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFD-GMDQKTVVSWNSMMDGYVQNGE 329

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             +A+ +F+KM    + P+  T +  + AC+  G +++G  + K +D Q  +        
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD-QLNLGSDISVMN 388

Query: 692 CLVDMLSR 699
            L+ M S+
Sbjct: 389 SLISMYSK 396


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 216/699 (30%), Positives = 349/699 (49%), Gaps = 2/699 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG +VK G   D+++   L+  Y   G      ++F+EM + N+VSWT ++     
Sbjct: 215 GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 274

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G     L +Y  M+  G   N+    +V   C  +     GY +    ++   E +  V
Sbjct: 275 SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 334

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ ++    V  A  VF  ++  D+  WNAMI  YAH G   E+L     M     
Sbjct: 335 ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 394

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  T  + L  CS V +   GR IHGL+++  ++ ++ I N L+ +Y ++   + A  
Sbjct: 395 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ M ++D+ISWN++   + ++        +  + +  G   NHVTF+  L  C     
Sbjct: 455 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 514

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L     +  L +  GF D   V ++L+ M+ + G +  A  V   +   +  TWN L+ G
Sbjct: 515 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 574

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSS 481
           +  N    + +K +  I E G+  N  T   V+  C   ++    G  IH  I+ TGF S
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+ +SLI  Y   G L++S    +G       +W AM++A  H G   EA+ IF  + 
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G   D++     L + A +   +  + +H  VIKLGF ++++V +A +D Y KCG++ 
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 754

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                  Q  N +  + +N LI A+A HG   +A E F +M     +P   TFVS++SAC
Sbjct: 755 DVLKMLPQPINRSR-LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 813

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +H GLVD+G   + SM  ++G+ P  +   C++D+L R+G L  A+  I+ MP  P+   
Sbjct: 814 NHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA 873

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +RSLL+ CRIHGN EL    +E LL L P +D+A+VL S
Sbjct: 874 WRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 912



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 185/702 (26%), Positives = 335/702 (47%), Gaps = 11/702 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           + S++ G  +H   +       IF  N LI MYSK G       VFDEM  RN  SW+ +
Sbjct: 107 ITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTM 166

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIR 175
           +S  ++ G ++  + ++  M   G  PN F V S++  C   G  ++ G+ +H F +K  
Sbjct: 167 LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 226

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           I  + +VG ++++FY  +G V  A+++F  +   +V  W +++ GY+  G   E LNV  
Sbjct: 227 ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 286

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  EG++ ++ TF      C L+ D  +G Q+ G II+   E S+S+ N+LI M+   S
Sbjct: 287 RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 346

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A  VF+ M + D+ISWN +   ++ +    ++   FH      +  N  T S LL 
Sbjct: 347 SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 406

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  + +L  G  +  L +  G      + ++L+ ++   G  E A  VF  ++ +++ +
Sbjct: 407 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 466

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +++ Y  +    D LK    + + G  +N  TF   +  C   E       +H  II
Sbjct: 467 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 526

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             GF     + ++L+  Y   G +  + +      + D  +W A++         +EAV 
Sbjct: 527 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 586

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAI-GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +  + E G   +   + ++L +C+A     +    IH  ++  GF ++ YV +++I  Y
Sbjct: 587 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 646

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCGD+  +   FD    +   I +N ++ A AHHG   EA++IF +M+   +   Q +F
Sbjct: 647 AKCGDLNSSNYIFD-GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSF 705

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
              ++A ++  ++++G  L   +  + G +         +DM  + G + D   V++++P
Sbjct: 706 SGGLAATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHD---VLKMLP 761

Query: 715 FQP---SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
            QP   S   +  L+S    HG  +       ++L L PK D
Sbjct: 762 -QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD 802



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 233/507 (45%), Gaps = 19/507 (3%)

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
           H  YG   LN V+                 L+G S +     G+ +H   I   V   I 
Sbjct: 86  HTDYGIRCLNAVNF---------------PLKGFSEITSQMAGKALHAFCIVGSVNLGIF 130

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             N LI+MY K   +++A  VF+ M  ++  SW+T+  G+       +   LF +    G
Sbjct: 131 QTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 190

Query: 343 SRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             PN    + L+  C +   + D G Q+    +  G L +  V ++L++ +   G V  A
Sbjct: 191 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 250

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +F+ +   N+ +W  L+ GY  +    +VL  +  + + GV  N  TF  V  +C   
Sbjct: 251 QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 310

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E+Q +  Q+ G II+ GF     + +SLI  + +F  ++ +    +     D+ SW AM+
Sbjct: 311 EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 370

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           SA  H G   E++  FH +     + +   L ++L+ C+++   +  + IH  V+KLG +
Sbjct: 371 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 430

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           + V + + ++  Y++ G  + A + F Q+    D+I +N+++  Y   G   + ++I  +
Sbjct: 431 SNVCICNTLLTLYSEAGRSEDAELVF-QAMTERDLISWNSMMACYVQDGKCLDGLKILAE 489

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           +       +  TF S ++ACS+   + +  ++  ++    G          LV M  + G
Sbjct: 490 LLQMGKVMNHVTFASALAACSNPECLIESKIV-HALIIVAGFHDFLIVGNALVTMYGKLG 548

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            + +AK V++ MP QP    + +L+ G
Sbjct: 549 MMMEAKKVLQTMP-QPDRVTWNALIGG 574



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 3/325 (0%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +  A +L+   N +  +    VH  I+  GF + + + N L+ MY K G      +V   
Sbjct: 500 VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQT 559

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEF 163
           M + + V+W  ++    +N E +  +K Y  ++  G   N   + SV+  C +     + 
Sbjct: 560 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 619

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  IH   +    E + +V  S++  YAK GD+ ++  +F  + +     WNAM+   AH
Sbjct: 620 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G G EAL +   M   G+ +D+++F   L   + +A  + G+Q+HGL+I+   E  + +
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 739

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NA +DMY K   M    K+  +  ++  +SWN L   F+ +    +    FH+ +  G 
Sbjct: 740 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799

Query: 344 RPNHVTFSILLRQC--GKLLDLDLG 366
           +P+HVTF  LL  C  G L+D  L 
Sbjct: 800 KPDHVTFVSLLSACNHGGLVDEGLA 824



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 189/405 (46%), Gaps = 4/405 (0%)

Query: 55  ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           +NLK    G  +HG +VKLG  +++ + N L+ +YS+ G       VF  M ER+L+SW 
Sbjct: 412 DNLK---WGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 468

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +++  +Q+G+   GLK+  ++   G + N     S +  C +         +H   +  
Sbjct: 469 SMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVA 528

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
                  VG +++  Y KLG +  A++V  ++   D   WNA+IGG+A      EA+   
Sbjct: 529 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 588

Query: 235 SSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             +  +GI  +  T ++ L  CS   D    G  IH  I+ +  E    + N+LI MY K
Sbjct: 589 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 648

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ +  +F+ + +K  I+WN +    + +    +   +F +    G   +  +FS  
Sbjct: 649 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 708

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L     L  L+ G QL  L +  GF  + +VT++ + M+ +CG +     +      ++ 
Sbjct: 709 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 768

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +WN L+S +  + C     +TF  + + G + +  TF  ++  C
Sbjct: 769 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 813



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    +  L+ + NL     G Q+HG ++KLGF +D+ + N  + MY KCG     L++ 
Sbjct: 701 DQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 760

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
            +   R+ +SW +++SA  ++G F    + + +M   G  P+     S++  C
Sbjct: 761 PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 813


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 185/694 (26%), Positives = 358/694 (51%), Gaps = 8/694 (1%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           K+G   D      +I+  +  G  G    +   +   + V+W  ++++  Q+G       
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFG 310

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           +Y DMK  G MP      S++    +M A + G  IH  A+K  ++ N FVG S++N Y 
Sbjct: 311 LYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYV 370

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G ++ A++VF   +  ++  WNA++ G+       E + +   M    +  D +TF++
Sbjct: 371 KHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVS 430

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C  +   D+GRQ+H + I++ ++  + + NA++DMY K   +D A  +F  +  KD
Sbjct: 431 VLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKD 490

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            +SWN L  G + N+  G+  ++  +    G   + V+F+  +  C  +  ++ G Q+  
Sbjct: 491 SVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHS 550

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
            ++         V SSLI ++ + G VE +  V  +V   +I   N L++G   N  + +
Sbjct: 551 ASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDE 610

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF----SSCGYICS 487
            ++ F  + + G + +  TF  ++  C R  +  +  Q+H   +K+      +S G    
Sbjct: 611 AIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI--- 667

Query: 488 SLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           SL+  Y+    L+++ +      +  ++  W A +S     G++ +++ +F  +     +
Sbjct: 668 SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVR 727

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            DE    ++L +C+ + A    K IH  ++K GF +     SA++D Y+KCGD+  +   
Sbjct: 728 SDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEI 787

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F +  N  +++ +N++I+ +A +G  +EA+ +F KM+ + ++P   T + V+ ACSH GL
Sbjct: 788 FKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGL 847

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           + +G   F SM   YG+ P  D Y CL+D+L R G+L+ A+ VI+ +PF+    ++ + L
Sbjct: 848 ISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYL 907

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + C++H ++E G+ A++KL+ + P++ + +V LS
Sbjct: 908 AACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLS 941



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 303/616 (49%), Gaps = 11/616 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS + N+ +   G Q+H   VK G   ++F+ ++LI +Y K G      +VFD   
Sbjct: 327 FASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFST 386

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  I+   +QN   +  ++M+  M+      ++F   SV+  C+++ + + G  
Sbjct: 387 EKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQ 446

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC  +K  ++ + FV  ++L+ Y+KLG +  A+ +F  I   D   WNA+I G AH   
Sbjct: 447 VHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEE 506

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+N++  M F GI +D+ +F  A+  CS +   + G+QIH   I+  V  + ++ ++
Sbjct: 507 EGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSS 566

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LID+Y K   ++ + KV   +    ++  N L  G  +N    +   LF + +  G +P+
Sbjct: 567 LIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPS 626

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVF 405
           + TF+ +L  C + +   +G Q+ C  L    L+++ ++  SL+ ++ +C  +E A+ + 
Sbjct: 627 NFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLL 686

Query: 406 DNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           + V  +KN+  W   +SGY  N      L  F  +    V  +  TF  V++ C      
Sbjct: 687 EEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAAL 746

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IHG I+K+GF S     S+L+  Y   G + +SFE F     R ++  W +M+  
Sbjct: 747 TDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVG 806

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGF 580
               G+ +EA+ +F  + E+  KPD+  L  +L +C+  G    ++ +H F       G 
Sbjct: 807 FAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLI--SEGLHFFDSMSQVYGI 864

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
              V   + +ID   + G ++ A+   DQ     D +++ T + A   H    E      
Sbjct: 865 VPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHK--DEERGKVA 922

Query: 641 KMKLANLQP-SQATFV 655
             KL  ++P S +T+V
Sbjct: 923 AKKLVEMEPQSSSTYV 938



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 169/705 (23%), Positives = 320/705 (45%), Gaps = 50/705 (7%)

Query: 26  HRLCGNNQFCSDSFLR--------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
           H   G+ +   D+F R         D   +A  LS    L +   G QVH  ++K GF +
Sbjct: 131 HARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS 190

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
            +F Q  L+ MY+KCG      R+FD +A  + + WT +++   + G +   L ++  M+
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G +P++    +++    SMG                                +LGD  
Sbjct: 251 KMGSVPDQVTCVTIISTLASMG--------------------------------RLGD-- 276

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  +   I       WNA+I  Y+  G   E   +   M  +G+   + TF + L   +
Sbjct: 277 -ARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAA 335

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            +  FD GRQIH   ++  ++ ++ + ++LI++Y+K   +  A KVF+   +K+++ WN 
Sbjct: 336 NMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 395

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  GF +N+   +T  +F     +    +  TF  +L  C  L  LDLG Q+ C+ +  G
Sbjct: 396 ILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG 455

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +  V ++++ M+ + GA+++A ++F  +  K+  +WN L+ G   N  + + +    
Sbjct: 456 MDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLK 515

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +   G+ ++  +F   +  C      +   QIH A IK    S   + SSLI  Y  FG
Sbjct: 516 RMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFG 575

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            +++S +     +   +    A+++ LV      EA+ +F  +++ G KP  +   +IL+
Sbjct: 576 DVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILS 635

Query: 558 SCAAIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            C    +    K +H + +K    N +  +  +++  Y KC  ++ A    ++  +  ++
Sbjct: 636 GCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNL 695

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CL 672
           + +   I  YA +G   +++ +F +M+  +++  +ATF SV+ ACS    +  G     L
Sbjct: 696 VEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGL 755

Query: 673 LFKSMDSQYGMQPSP--DCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           + KS    Y    S   D Y    D++S     ++ K+   IMP+
Sbjct: 756 IVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPW 800



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 166/687 (24%), Positives = 296/687 (43%), Gaps = 56/687 (8%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNL 110
           L    ++R  G  +H  I++LG      L + L+ +Y + G  G+  R       A  + 
Sbjct: 63  LHRTHQARACGV-LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASS 121

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
            + + ++S   ++G     L  +  ++ + G  P++F +  V+  C  +GA E G  +HC
Sbjct: 122 AAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHC 181

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             LK     + F    +++ YAK G+V  A R+F  I+  D  CW +MI GY   G   +
Sbjct: 182 DVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQ 241

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL + S M   G   D+ T                                ++I++ L  
Sbjct: 242 ALALFSRMEKMGSVPDQVT-------------------------------CVTIISTLAS 270

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           M      +  A  + +R+     ++WN +   +S++    +   L+      G  P   T
Sbjct: 271 M----GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRST 326

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           F+ +L     +   D G Q+   A+  G      V SSLI ++ + G +  A  VFD  +
Sbjct: 327 FASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFST 386

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            KNI  WN +L G+  N    + ++ F  +  + +E +  TF  V+  C    +  +  Q
Sbjct: 387 EKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQ 446

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H   IK G  +  ++ ++++  Y   G +D +    +     D  SW A++  L H   
Sbjct: 447 VHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEE 506

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             EA+ +   +   G   DE    T +N+C+ I A +  K IH   IK    +   V S+
Sbjct: 507 EGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSS 566

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID Y+K GD++ +R       +++ ++  N LI     +    EA+E+F ++     +P
Sbjct: 567 LIDLYSKFGDVESSRKVLAH-VDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKP 625

Query: 650 SQATFVSVMSACSHK--GLVDKG--CLLFKS----MDSQYGMQPSPDCYGCLVDMLSRNG 701
           S  TF S++S C+     ++ K   C   KS     D+  G+         LV +  +  
Sbjct: 626 SNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGIS--------LVGIYLKCK 677

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            LEDA  ++E +P   +   + + +SG
Sbjct: 678 LLEDANKLLEEVPDHKNLVEWTATISG 704



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 208/431 (48%), Gaps = 7/431 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q+   + L  D       L    NL S  LG QVH   +K G   D+F+ N ++ MYSK 
Sbjct: 414 QYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKL 473

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +F  +  ++ VSW  ++     N E    + M   MK  G   +E +  + +
Sbjct: 474 GAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAI 533

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C ++ A E G  IH  ++K  +  N  VG S+++ Y+K GDV ++ +V   + +  + 
Sbjct: 534 NACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIV 593

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
             NA+I G        EA+ +   +L +G     +TF + L GC+      IG+Q+H   
Sbjct: 594 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYT 653

Query: 273 IRSEV---ECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNP 328
           ++S +   + S+ I  +L+ +Y+K   ++ A K+ E + D K+++ W     G+++N   
Sbjct: 654 LKSAILNQDTSLGI--SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYS 711

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            Q+  +F +      R +  TF+ +L+ C ++  L  G ++  L +  GF+  E  TS+L
Sbjct: 712 VQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSAL 771

Query: 389 IYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           + M+ +CG V  +  +F  + + +NI  WN ++ G+  N    + L  F  + ES ++ +
Sbjct: 772 MDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPD 831

Query: 448 GCTFFYVVETC 458
             T   V+  C
Sbjct: 832 DVTLLGVLIAC 842


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 216/699 (30%), Positives = 349/699 (49%), Gaps = 2/699 (0%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            G QVHG +VK G   D+++   L+  Y   G      ++F+EM + N+VSWT ++     
Sbjct: 865  GFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSD 924

Query: 123  NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            +G     L +Y  M+  G   N+    +V   C  +     GY +    ++   E +  V
Sbjct: 925  SGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSV 984

Query: 183  GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              S+++ ++    V  A  VF  ++  D+  WNAMI  YAH G   E+L     M     
Sbjct: 985  ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 1044

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              +  T  + L  CS V +   GR IHGL+++  ++ ++ I N L+ +Y ++   + A  
Sbjct: 1045 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104

Query: 303  VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            VF+ M ++D+ISWN++   + ++        +  + +  G   NHVTF+  L  C     
Sbjct: 1105 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 1164

Query: 363  LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            L     +  L +  GF D   V ++L+ M+ + G +  A  V   +   +  TWN L+ G
Sbjct: 1165 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 1224

Query: 423  YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSS 481
            +  N    + +K +  I E G+  N  T   V+  C   ++    G  IH  I+ TGF S
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284

Query: 482  CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              Y+ +SLI  Y   G L++S    +G       +W AM++A  H G   EA+ IF  + 
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344

Query: 542  EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
              G   D++     L + A +   +  + +H  VIKLGF ++++V +A +D Y KCG++ 
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMH 1404

Query: 602  GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                   Q  N +  + +N LI A+A HG   +A E F +M     +P   TFVS++SAC
Sbjct: 1405 DVLKMLPQPINRSR-LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 1463

Query: 662  SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
            +H GLVD+G   + SM  ++G+ P  +   C++D+L R+G L  A+  I+ MP  P+   
Sbjct: 1464 NHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLA 1523

Query: 722  YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +RSLL+ CRIHGN EL    +E LL L P +D+A+VL S
Sbjct: 1524 WRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 1562



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 185/702 (26%), Positives = 335/702 (47%), Gaps = 11/702 (1%)

Query: 57   LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
            + S++ G  +H   +       IF  N LI MYSK G       VFDEM  RN  SW+ +
Sbjct: 757  ITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTM 816

Query: 117  VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIR 175
            +S  ++ G ++  + ++  M   G  PN F V S++  C   G  ++ G+ +H F +K  
Sbjct: 817  LSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTG 876

Query: 176  IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            I  + +VG ++++FY  +G V  A+++F  +   +V  W +++ GY+  G   E LNV  
Sbjct: 877  ILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQ 936

Query: 236  SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
             M  EG++ ++ TF      C L+ D  +G Q+ G II+   E S+S+ N+LI M+   S
Sbjct: 937  RMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS 996

Query: 296  GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
             ++ A  VF+ M + D+ISWN +   ++ +    ++   FH      +  N  T S LL 
Sbjct: 997  SVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 1056

Query: 356  QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             C  + +L  G  +  L +  G      + ++L+ ++   G  E A  VF  ++ +++ +
Sbjct: 1057 VCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLIS 1116

Query: 416  WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
            WN +++ Y  +    D LK    + + G  +N  TF   +  C   E       +H  II
Sbjct: 1117 WNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII 1176

Query: 476  KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
              GF     + ++L+  Y   G +  + +      + D  +W A++         +EAV 
Sbjct: 1177 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVK 1236

Query: 536  IFHSLVEAGEKPDEYILGTILNSCAAI-GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
             +  + E G   +   + ++L +C+A     +    IH  ++  GF ++ YV +++I  Y
Sbjct: 1237 AYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMY 1296

Query: 595  AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            AKCGD+  +   FD    +   I +N ++ A AHHG   EA++IF +M+   +   Q +F
Sbjct: 1297 AKCGDLNSSNYIFD-GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSF 1355

Query: 655  VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
               ++A ++  ++++G  L   +  + G +         +DM  + G + D   V++++P
Sbjct: 1356 SGGLAATANLAVLEEGQQL-HGLVIKLGFESDLHVTNAAMDMYGKCGEMHD---VLKMLP 1411

Query: 715  FQP---SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
             QP   S   +  L+S    HG  +       ++L L PK D
Sbjct: 1412 -QPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPD 1452



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 272/533 (51%), Gaps = 5/533 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL ++SS       +D   ++  LQ C        G  IH  +I +     + +   LI
Sbjct: 16  EALKLLSS---NPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
             Y+K   +  A  VF+ M ++ V+SW  +  G+S+N    +   LF      G + N  
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQF 132

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T+   LR C  L  LD+G+Q+Q       F++   V S+L+    +CG +E A  +F  +
Sbjct: 133 TYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +++ +WN ++ GY       D    F ++   G+  +  T   V+          +  
Sbjct: 193 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 252

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           QIHG I + G+ S   +   LI +Y   G L ++ +   G  + D+ S  A+++   H+G
Sbjct: 253 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 312

Query: 529 -HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
            ++ +A+ +F  + +     D+ IL ++LN CA + ++     IH F +K   + +V + 
Sbjct: 313 IYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMG 372

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+ID YAK G+I+ A+ AFD+     +VI + +LI  YA HG    A+ ++ KM+    
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDE-MEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGF 431

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P+  TF+S++ ACSH GL  +GC  F +M ++Y ++P  + Y C+VD+ +R G LE+A 
Sbjct: 432 KPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAY 491

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +++  +  + + +++ ++L    I+G   LG+ A+  L  + P+N   +V+L+
Sbjct: 492 NLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLA 544



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 203/436 (46%), Gaps = 1/436 (0%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
           RL    +  S +  R DP    K L L  + K++  G  +H H++  GF +D+ L   LI
Sbjct: 13  RLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLI 72

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
             Y K G       VFD M ER++VSWT +VS   QNG F+    ++ DM+  G   N+F
Sbjct: 73  IFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQF 132

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
             GS ++ C S+   + G  +     K R  +N FV  ++++F++K G +  A  +F ++
Sbjct: 133 TYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM 192

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              DV  WNAMIGGYA  G+  ++  +  SML  G+  D YT  + L+  +      I  
Sbjct: 193 MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIAN 252

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS-EN 325
           QIHG+I +        +   LI+ Y K+  +  A  + + M  KD+ S   L  G++ E 
Sbjct: 253 QIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEG 312

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                   LF +        + V    +L  C  L    LG Q+   AL      +  + 
Sbjct: 313 IYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMG 372

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++LI M+ + G +E A   FD +  KN+ +W  L+SGY  +      +  +  +   G +
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFK 432

Query: 446 VNGCTFFYVVETCCRS 461
            N  TF  ++  C  +
Sbjct: 433 PNDVTFLSLLFACSHT 448



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 233/507 (45%), Gaps = 19/507 (3%)

Query: 223  HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            H  YG   LN V+                 L+G S +     G+ +H   I   V   I 
Sbjct: 736  HTDYGIRCLNAVNF---------------PLKGFSEITSQMAGKALHAFCIVGSVNLGIF 780

Query: 283  IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
              N LI+MY K   +++A  VF+ M  ++  SW+T+  G+       +   LF +    G
Sbjct: 781  QTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG 840

Query: 343  SRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              PN    + L+  C +   + D G Q+    +  G L +  V ++L++ +   G V  A
Sbjct: 841  VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNA 900

Query: 402  HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
              +F+ +   N+ +W  L+ GY  +    +VL  +  + + GV  N  TF  V  +C   
Sbjct: 901  QKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLL 960

Query: 462  ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            E+Q +  Q+ G II+ GF     + +SLI  + +F  ++ +    +     D+ SW AM+
Sbjct: 961  EDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMI 1020

Query: 522  SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
            SA  H G   E++  FH +     + +   L ++L+ C+++   +  + IH  V+KLG +
Sbjct: 1021 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080

Query: 582  TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            + V + + ++  Y++ G  + A + F Q+    D+I +N+++  Y   G   + ++I  +
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVF-QAMTERDLISWNSMMACYVQDGKCLDGLKILAE 1139

Query: 642  MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
            +       +  TF S ++ACS+   + +  ++  ++    G          LV M  + G
Sbjct: 1140 LLQMGKVMNHVTFASALAACSNPECLIESKIV-HALIIVAGFHDFLIVGNALVTMYGKLG 1198

Query: 702  YLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             + +AK V++ MP QP    + +L+ G
Sbjct: 1199 MMMEAKKVLQTMP-QPDRVTWNALIGG 1224



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 157/324 (48%), Gaps = 3/324 (0%)

Query: 45   IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
            +  A +L+   N +  +    VH  I+  GF + + + N L+ MY K G      +V   
Sbjct: 1150 VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQT 1209

Query: 105  MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEF 163
            M + + V+W  ++    +N E +  +K Y  ++  G   N   + SV+  C +     + 
Sbjct: 1210 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 1269

Query: 164  GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
            G  IH   +    E + +V  S++  YAK GD+ ++  +F  + +     WNAM+   AH
Sbjct: 1270 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 1329

Query: 224  CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
             G G EAL +   M   G+ +D+++F   L   + +A  + G+Q+HGL+I+   E  + +
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 1389

Query: 284  VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             NA +DMY K   M    K+  +  ++  +SWN L   F+ +    +    FH+ +  G 
Sbjct: 1390 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449

Query: 344  RPNHVTFSILLRQC--GKLLDLDL 365
            +P+HVTF  LL  C  G L+D  L
Sbjct: 1450 KPDHVTFVSLLSACNHGGLVDEGL 1473



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 189/405 (46%), Gaps = 4/405 (0%)

Query: 55   ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
            +NLK    G  +HG +VKLG  +++ + N L+ +YS+ G       VF  M ER+L+SW 
Sbjct: 1062 DNLK---WGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWN 1118

Query: 115  LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
             +++  +Q+G+   GLK+  ++   G + N     S +  C +         +H   +  
Sbjct: 1119 SMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVA 1178

Query: 175  RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
                   VG +++  Y KLG +  A++V  ++   D   WNA+IGG+A      EA+   
Sbjct: 1179 GFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY 1238

Query: 235  SSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              +  +GI  +  T ++ L  CS   D    G  IH  I+ +  E    + N+LI MY K
Sbjct: 1239 KLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAK 1298

Query: 294  SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
               ++ +  +F+ + +K  I+WN +    + +    +   +F +    G   +  +FS  
Sbjct: 1299 CGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGG 1358

Query: 354  LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            L     L  L+ G QL  L +  GF  + +VT++ + M+ +CG +     +      ++ 
Sbjct: 1359 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 1418

Query: 414  TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             +WN L+S +  + C     +TF  + + G + +  TF  ++  C
Sbjct: 1419 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 1463



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 193/419 (46%), Gaps = 13/419 (3%)

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC---GF 378
           FS+ ++      L     L  S P  +  S+ L+     +D     Q   +  H    GF
Sbjct: 2   FSKIQSACNLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGF 61

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             + ++ + LI  + + G V  A +VFD +  +++ +W  ++SGY  N         F +
Sbjct: 62  GSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSD 121

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV+ N  T+   +  C       M  Q+ G I K  F    ++ S+L+  +   G+
Sbjct: 122 MRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGK 181

Query: 499 L-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           + D S+ F    ER D+ SW AM+     QG   ++  +F S++  G  PD Y LG++L 
Sbjct: 182 MEDASYLFGTMMER-DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLR 240

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           + A  G       IH  + +LG+ +   V   +I+AYAK G ++ A+    +     D+ 
Sbjct: 241 ASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK-DLRKGMLKKDLF 299

Query: 618 VYNTLIMAYAHHGLVS-EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
               LI  YAH G+ S +A+++F +M   N+        S+++ C++      G  +  +
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQI-HA 358

Query: 677 MDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
              +Y  QPS D      L+DM +++G +EDAK   + M  + +   + SL+SG   HG
Sbjct: 359 FALKY--QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHG 414



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 58/113 (51%)

Query: 43   DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
            D    +  L+ + NL     G Q+HG ++KLGF +D+ + N  + MY KCG     L++ 
Sbjct: 1351 DQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 1410

Query: 103  DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
             +   R+ +SW +++SA  ++G F    + + +M   G  P+     S++  C
Sbjct: 1411 PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSAC 1463


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 186/663 (28%), Positives = 345/663 (52%), Gaps = 7/663 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FDE   +++  +  ++    +N      L ++ D+ ++G   +   +   +KVC  + 
Sbjct: 59  QLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLF 118

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +HC +LK    ++  VG S+++ Y K  D      +F  +   +V  W +++ 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G   E +++++ M  EG+  + +TF   L   +  +  + G Q+H +I+++  E 
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEF 238

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +  + NALI MY+KS  +  A  VF+ M  +D ++WN + GG++      +   +FH+  
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L+G + +   F   L+ C +  +L+   QL C  +  G+   +++ ++L+  + +C +V+
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  +F    +  N+ TW  ++ G+  N  +   +  FC +   GV  N  T+     T 
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTY----STV 414

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
              +   ++ Q+H  IIK  +     + ++L+ +YV  G +  S          D+ +W 
Sbjct: 415 LAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIK 577
           AM++ L     + +A+ +F  LV+ G KP+EY   +++N+C++  A  +  K IH   +K
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G +  + V+SA++  Y+K G+I+ A   F +     D++ +N++I  Y  HG   +A+E
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGDAKKALE 593

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F  M+   L     TF+ V++AC+H GLV++G   F  M   Y +    + Y C+VD+ 
Sbjct: 594 VFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLY 653

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           SR G  + A  +I  MPF  SPT++R+LL+ CR+H N ELG+ A+EKL+ L P +   +V
Sbjct: 654 SRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYV 713

Query: 758 LLS 760
           LLS
Sbjct: 714 LLS 716



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 175/624 (28%), Positives = 290/624 (46%), Gaps = 17/624 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+ +L +   L  +V+G QVH   +K GF  D+ +  +L+ MY K   F  G  +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DEM  +N+VSWT ++S   +NG  D  + +   M+  G  PN F   +V+         E
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H   +K   E   FV  +++  Y K   V  AE VF S+   D   WN MIGGYA
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G+  E   +   M   G+ + +  F  AL+ CS   + +  +Q+H  ++++  E +  
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADK--DVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I  AL+  Y K S +D AFK+F  MAD   +V++W  + GGF +N N  +   LF +   
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSR 401

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RPNH T+S +L   GK   L   L  Q +  +  +    +V ++L+  + + G V  
Sbjct: 402 EGVRPNHFTYSTVL--AGKPSSLLSQLHAQIIKAY--YEKVPSVATALLDAYVKTGNVVE 457

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  VF ++  K+I  W+ +L+G          ++ F  + + GV+ N  TF  V+  C  
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517

Query: 461 SENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           S      G QIH   +K+G S+   + S+L+  Y   G ++++ +     E  D+ SW +
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNS 577

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-- 577
           M++     G   +A+ +F  +   G   D+     +L +C   G  +  +     +IK  
Sbjct: 578 MITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDY 637

Query: 578 -LGFNTEVYVASAVIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            +    E Y  S ++D Y++ G   K   +     F ++  I    L     H  L    
Sbjct: 638 HIDKKXEHY--SCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL---E 692

Query: 636 MEIFDKMKLANLQPSQATFVSVMS 659
           +      KL +LQP+ A    ++S
Sbjct: 693 LGKLAAEKLVSLQPNDAVGYVLLS 716



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 137/586 (23%), Positives = 279/586 (47%), Gaps = 11/586 (1%)

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K  +++G      SIH   +K  +  + F+    L F +       A ++F      D+ 
Sbjct: 13  KAKITVGNGRLQSSIH--HIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDIS 70

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            +N ++  ++   +  EAL++   +   G+ +D  T   AL+ C ++ D  +GRQ+H   
Sbjct: 71  HYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQS 130

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++S     +S+  +L+DMY+K+   +    +F+ M  K+V+SW +L  G++ N    +  
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            L ++  + G  PN  TF+ +L        ++ G+Q+  + +  GF     V ++LI M+
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMY 250

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +   V  A +VFD++  ++  TWN ++ GY       +  + F  +  +GV+++   F 
Sbjct: 251 LKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFC 310

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAER 511
             ++ C +        Q+H  ++K G+     I ++L+ +Y     +D +F+ FS     
Sbjct: 311 TALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAA 370

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ +W AM+   V   +N +AV +F  +   G +P+ +   T+L    A         +
Sbjct: 371 HNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL----AGKPSSLLSQL 426

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGD-IKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           H  +IK  +     VA+A++DAY K G+ ++ AR+ +  S  + D++ ++ ++   A   
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFY--SIPAKDIVAWSAMLTGLAQTR 484

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +AME+F ++    ++P++ TF SV++ACS      +      +   + G   +    
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
             L+ M S+ G +E A+ V      +     + S+++G   HG+ +
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGDAK 589


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 211/699 (30%), Positives = 352/699 (50%), Gaps = 8/699 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VH H+++ GF +++ + N L+ MY+KCG      +VFD MA  + +SW  +++   
Sbjct: 215 MGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHF 274

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N E + GL++++ M  N   PN   + SV      +    F   +H FA+K     +  
Sbjct: 275 ENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVA 334

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              S++  Y  LG +  A ++F  + + D   W AMI GY   G+  +AL V + M    
Sbjct: 335 FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHN 394

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T  +AL  C+ +   D+G ++H L         + + NAL++MY KS  +D A 
Sbjct: 395 VNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ MA+KDV+SW+++  GF  N         F +++L   +PN VTF   L  C    
Sbjct: 455 EVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYF-RYMLGHVKPNSVTFIAALSACAATG 513

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    L CG   E  V ++L+ ++ +CG    A + F   S K++ +WN +LS
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFS 480
           G+  +      L  F  +  + +   G               +  VG ++H      GF 
Sbjct: 574 GFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACA---CLGRLDVGIKLHELAQNKGFI 630

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L++ Y     +D + E        D+ SW +M++       + +A+  F  +
Sbjct: 631 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 690

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +    KP+       L++CAA GA +  K IH +V++ G  +E YV +A++D Y KCG  
Sbjct: 691 L-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQT 749

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             A   F    +  DV+ +N ++  +  HGL   A+ +F++M      P + TFV +M A
Sbjct: 750 SYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCA 807

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CS  G+V +G  LF     ++ + P+   Y C+VD+LSR G L +A ++I  MP +P   
Sbjct: 808 CSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAA 867

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           V+ +LL+GCRIH + ELGE A++ +L L P + A HVLL
Sbjct: 868 VWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLL 906



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 164/609 (26%), Positives = 295/609 (48%), Gaps = 13/609 (2%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S++++  + S V    ++HG  VK GF  D+   N+LI MY+  G  G   ++F  M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + +SWT ++S   +NG  D  L++Y  M+ +   P++  + S +  C  +G  + G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLH 422

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A      +   V  ++L  YAK   +  A  VF  ++  DV  W++MI G+      F
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL     ML   +  +  TFI AL  C+       G++IH  ++R  +     + NAL+
Sbjct: 483 DALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALL 541

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNH 347
           D+Y+K     YA+  F   ++KDV+SWN +  GF  +       SLF++ + +   R   
Sbjct: 542 DLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGA 601

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +        G+   LD+G++L  LA + GF+    V ++L+ M+ +   ++ A  VF  
Sbjct: 602 CSALAACACLGR---LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 658

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++ K++ +W+ +++G+CFN    D L  F  +    V+ N  TF   +  C  +   +  
Sbjct: 659 MAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSG 717

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVH 526
            +IH  +++ G  S GY+ ++L+  YV  GQ   ++ +FS  +E+ D+ SW  M+S  V 
Sbjct: 718 KEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK-DVVSWNIMLSGFVA 776

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVY 585
            G    A+++F+ +VE GE PDE     ++ +C+  G   Q  +  H    K      + 
Sbjct: 777 HGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGMVIQGWELFHRRTEKFSIVPNLK 835

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             + ++D  ++ G +  A    ++     D  V+  L+     H  V E  E+  K+ L 
Sbjct: 836 HYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHV-ELGELAAKVIL- 893

Query: 646 NLQPSQATF 654
            L+P+   +
Sbjct: 894 ELEPNDVAY 902



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 157/596 (26%), Positives = 286/596 (47%), Gaps = 17/596 (2%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L N +++M  + G      RVF +M ER++ SW ++V    + G  +  L +Y  M   G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+ +    V++ C  +     G  +H   L+        V  +++  YAK GD+ AA 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF  ++  D   WNAMI G+         L +  +ML   +  +  T  +      +++
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           +    +++HG  ++      ++  N+LI MY     M  A K+F RM  KD +SW  +  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +N  P +   ++    L    P+ VT +  L  C  L  LD+G++L  LA + GF+ 
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V ++L+ M+ +   ++ A  VF  ++ K++ +W+ +++G+CFN    D L  F  + 
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML 492

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
              V+ N  TF   +  C  +   +   +IH  +++ G  S GY+ ++L+  YV  GQ  
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 501 NSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI---- 555
            ++ +FS  +E+ D+ SW  M+S  V  G    A+++F+ ++          LG +    
Sbjct: 552 YAWAQFSVHSEK-DVVSWNIMLSGFVAHGLGDIALSLFNQMMYTS-------LGRMGACS 603

Query: 556 -LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
            L +CA +G       +H      GF   V VA+A+++ YAK   I  A   F +     
Sbjct: 604 ALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVF-KFMAEK 662

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
           DV+ ++++I  +  +    +A+  F  M L +++P+  TF++ +SAC+  G +  G
Sbjct: 663 DVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSG 717


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 208/666 (31%), Positives = 334/666 (50%), Gaps = 20/666 (3%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ + +++      +  YVDM   G  P+ +A  +++K    +   E G  IH    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 173 KIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           K     +   V  +++N Y K GD  A  +VF  IS  +   WN++I           AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 232 NVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVECSISIVNALI 288
                ML E +    +T ++ +  CS   +     +G+Q+H   +R + E +  I+N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  +  +      +D+++WNT+     +N+   +      + +L G  P+  
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDN 407
           T S +L  C  L  L  G +L   AL  G LDE + V S+L+ M+C C  V     VFD 
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQM 466
           +  + I  WN +++GY  N  D + L  F  + ES G+  N  T   VV  C RS     
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IHG ++K G     ++ ++L+  Y   G++D +       E  D+ +W  M++  V 
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483

Query: 527 QGHNHEAVTIFHSL------VEAGE-----KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
             H+ +A+ + H +      V  G      KP+   L TIL SCAA+ A  + K IH + 
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           IK    T+V V SA++D YAKCG ++ +R  FDQ    N VI +N +IMAY  HG   EA
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAYGMHGNGQEA 602

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++   M +  ++P++ TF+SV +ACSH G+VD+G  +F  M   YG++PS D Y C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           +L R G +++A  ++ +MP   +    + SLL   RIH N E+GE A++ L+ L P   +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722

Query: 755 AHVLLS 760
            +VLL+
Sbjct: 723 HYVLLA 728



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 160/655 (24%), Positives = 304/655 (46%), Gaps = 26/655 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           +L+   LG Q+H H+ K G+  D + + N L+ +Y KCG FG   +VFD ++ERN VSW 
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFA 171
            ++S+     +++M L+ +  M      P+ F + SV+  C ++   E    G  +H + 
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L+ + E N F+  +++  Y KLG +A+++ +  S    D+  WN ++          EAL
Sbjct: 229 LR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDM 290
             +  M+ EG+  D++T  + L  CS +     G+++H   +++      S V +AL+DM
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVT 349
           Y     +    +VF+ M D+ +  WN +  G+S+N++  +   LF     S G   N  T
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            + ++  C +         +    +  G   +  V ++L+ M+ R G +++A  +F  + 
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467

Query: 410 YKNITTWNELLSGYCFNCCDADVL-----------KTFCNIWESGVEVNGCTFFYVVETC 458
            +++ TWN +++GY F+    D L           K         ++ N  T   ++ +C
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                     +IH   IK   ++   + S+L+  Y   G L  S +  +   + ++ +W 
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++ A    G+  EA+ +   ++  G KP+E    ++  +C+  G       I  +V+K 
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKP 646

Query: 579 GFNTEVYVA--SAVIDAYAKCGDIKGARMAFD-QSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            +  E      + V+D   + G IK A    +    + N    +++L+ A   H  + E 
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL-EI 705

Query: 636 MEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            EI  +  L  L+P+ A+ +V + +  S  GL DK   + ++M  Q G++  P C
Sbjct: 706 GEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ-GVRKEPGC 758



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 17/425 (4%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           +L + E L   ++G QVH + ++ G  N  F+ N L+AMY K G       +      R+
Sbjct: 211 NLPMPEGL---MMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRD 266

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           LV+W  ++S+  QN +    L+   +M   G  P+EF + SV+  C  +     G  +H 
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326

Query: 170 FALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           +ALK   +++N FVG ++++ Y     V +  RVF  +    +G WNAMI GY+   +  
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386

Query: 229 EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           EAL +   M    G+  +  T    +  C     F     IHG +++  ++    + N L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF------ILS 341
           +DMY +   +D A ++F +M D+D+++WNT+  G+  +++      L HK       +  
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506

Query: 342 GS-----RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           G+     +PN +T   +L  C  L  L  G ++   A+      +  V S+L+ M+ +CG
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++M+  VFD +  KN+ TWN ++  Y  +    + +     +   GV+ N  TF  V  
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626

Query: 457 TCCRS 461
            C  S
Sbjct: 627 ACSHS 631



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 3/184 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ + I L   L     L +   G ++H + +K     D+ + + L+ MY+KCG      
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD++ ++N+++W +I+ A   +G     + +   M   G  PNE    SV   C   G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 160 ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNA 216
             + G  I +       +E +      V++   + G +  A ++   +  D    G W++
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692

Query: 217 MIGG 220
           ++G 
Sbjct: 693 LLGA 696


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 208/666 (31%), Positives = 334/666 (50%), Gaps = 20/666 (3%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ + +++      +  YVDM   G  P+ +A  +++K    +   E G  IH    
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 173 KIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           K     +   V  +++N Y K GD  A  +VF  IS  +   WN++I           AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 232 NVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVECSISIVNALI 288
                ML E +    +T ++ +  CS   +     +G+Q+H   +R + E +  I+N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  +  +      +D+++WNT+     +N+   +      + +L G  P+  
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDN 407
           T S +L  C  L  L  G +L   AL  G LDE + V S+L+ M+C C  V     VFD 
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQM 466
           +  + I  WN +++GY  N  D + L  F  + ES G+  N  T   VV  C RS     
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IHG ++K G     ++ ++L+  Y   G++D +       E  D+ +W  M++  V 
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483

Query: 527 QGHNHEAVTIFHSL------VEAGE-----KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
             H+ +A+ + H +      V  G      KP+   L TIL SCAA+ A  + K IH + 
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           IK    T+V V SA++D YAKCG ++ +R  FDQ    N VI +N +IMAY  HG   EA
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAYGMHGNGQEA 602

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++   M +  ++P++ TF+SV +ACSH G+VD+G  +F  M   YG++PS D Y C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           +L R G +++A  ++ +MP   +    + SLL   RIH N E+GE A++ L+ L P   +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722

Query: 755 AHVLLS 760
            +VLL+
Sbjct: 723 HYVLLA 728



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 160/655 (24%), Positives = 304/655 (46%), Gaps = 26/655 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           +L+   LG Q+H H+ K G+  D + + N L+ +Y KCG FG   +VFD ++ERN VSW 
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFA 171
            ++S+     +++M L+ +  M      P+ F + SV+  C ++   E    G  +H + 
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L+ + E N F+  +++  Y KLG +A+++ +  S    D+  WN ++          EAL
Sbjct: 229 LR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDM 290
             +  M+ EG+  D++T  + L  CS +     G+++H   +++      S V +AL+DM
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVT 349
           Y     +    +VF+ M D+ +  WN +  G+S+N++  +   LF     S G   N  T
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            + ++  C +         +    +  G   +  V ++L+ M+ R G +++A  +F  + 
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467

Query: 410 YKNITTWNELLSGYCFNCCDADVL-----------KTFCNIWESGVEVNGCTFFYVVETC 458
            +++ TWN +++GY F+    D L           K         ++ N  T   ++ +C
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                     +IH   IK   ++   + S+L+  Y   G L  S +  +   + ++ +W 
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++ A    G+  EA+ +   ++  G KP+E    ++  +C+  G       I  +V+K 
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKP 646

Query: 579 GFNTEVYVA--SAVIDAYAKCGDIKGARMAFD-QSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            +  E      + V+D   + G IK A    +    + N    +++L+ A   H  + E 
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL-EI 705

Query: 636 MEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            EI  +  L  L+P+ A+ +V + +  S  GL DK   + ++M  Q G++  P C
Sbjct: 706 GEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ-GVRKEPGC 758



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 17/425 (4%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           +L + E L   ++G QVH + ++ G  N  F+ N L+AMY K G       +      R+
Sbjct: 211 NLPMPEGL---MMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRD 266

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           LV+W  ++S+  QN +    L+   +M   G  P+EF + SV+  C  +     G  +H 
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326

Query: 170 FALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           +ALK   +++N FVG ++++ Y     V +  RVF  +    +G WNAMI GY+   +  
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386

Query: 229 EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           EAL +   M    G+  +  T    +  C     F     IHG +++  ++    + N L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF------ILS 341
           +DMY +   +D A ++F +M D+D+++WNT+  G+  +++      L HK       +  
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506

Query: 342 GS-----RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           G+     +PN +T   +L  C  L  L  G ++   A+      +  V S+L+ M+ +CG
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++M+  VFD +  KN+ TWN ++  Y  +    + +     +   GV+ N  TF  V  
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626

Query: 457 TCCRS 461
            C  S
Sbjct: 627 ACSHS 631



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 3/184 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ + I L   L     L +   G ++H + +K     D+ + + L+ MY+KCG      
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD++ ++N+++W +I+ A   +G     + +   M   G  PNE    SV   C   G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632

Query: 160 ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNA 216
             + G  I +       +E +      V++   + G +  A ++   +  D    G W++
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692

Query: 217 MIGG 220
           ++G 
Sbjct: 693 LLGA 696


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 193/661 (29%), Positives = 344/661 (52%), Gaps = 9/661 (1%)

Query: 106 AERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           A  + V+W  ++S  A Q+G       +Y DM+  G  P      S++    +  A   G
Sbjct: 160 APSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEG 219

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H  A++  ++ N FVG S++N YAK G +  A  VF      +V  WNAM+ G    
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRN 279

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
            Y  EA+ +   M   G+  D++T+++ L  C+ +    +GRQ+  + I++ ++ S+ + 
Sbjct: 280 EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA 339

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NA +DM+ K   +D A  +F  +  KD +SWN L  G + N+   +   +     L G  
Sbjct: 340 NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVT 399

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ V+F+ ++  C  +   + G Q+ CLA+         V SSLI  + + G VE    V
Sbjct: 400 PDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKV 459

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
              V   +I   N L++G   N  + + +  F  +   G++ +  TF  ++  C    + 
Sbjct: 460 LAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSS 519

Query: 465 QMVGQIHGAIIKTGF----SSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGA 519
            +  Q+H   +K+GF    +S G    SL+ +Y+     +++ +      +  ++  W A
Sbjct: 520 IIGKQVHCYTLKSGFLNDDTSVGV---SLVGTYLKARMPEDANKLLIEMPDHKNLVEWTA 576

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++S     G++++++  F  +      PDE    +IL +C+ + A    K IH  +IK G
Sbjct: 577 IVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSG 636

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F +     SA+ID Y+KCGDI  +  AF +  +  D+ ++N++I+ +A +G   EA+ +F
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLF 696

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            KM+ + ++  + TF+ V+ AC+H GL+ +G   F SM   YG+ P  D Y C +D+L R
Sbjct: 697 QKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGR 756

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G+L++A+ VI  +PF+P   ++ + L+ CR+H ++E GE A+++L+ L P+N + +VLL
Sbjct: 757 GGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLL 816

Query: 760 S 760
           S
Sbjct: 817 S 817



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 164/617 (26%), Positives = 297/617 (48%), Gaps = 6/617 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS + N  + + G QVH   V+ G   ++F+ ++LI +Y+KCG  G  + VFD   
Sbjct: 203 FASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSG 262

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N+V W  +++  ++N      ++M++ MK  G   +EF   SV+  C  + +   G  
Sbjct: 263 EKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQ 322

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           + C  +K  ++ + FV  + L+ ++K G +  A+ +F  I+  D   WNA++ G  H   
Sbjct: 323 VQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEE 382

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA++++  M  +G+T D+ +F   +  CS +   + G+QIH L ++  +  + ++ ++
Sbjct: 383 DEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSS 442

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LID Y K   ++   KV  ++    ++  N L  G  +N    +   LF + +  G +P+
Sbjct: 443 LIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPS 502

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVF 405
             TFS +L  C  LL   +G Q+ C  L  GFL D+ +V  SL+  + +    E A+ + 
Sbjct: 503 SFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLL 562

Query: 406 -DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
            +   +KN+  W  ++SGY  N      L +F  +    V  +  TF  +++ C      
Sbjct: 563 IEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTAL 622

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IHG IIK+GF S     S++I  Y   G + +SFE F     + D+  W +M+  
Sbjct: 623 SDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILG 682

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNT 582
               G+  EA+ +F  + ++  K DE     +L +CA  G     +     + K+ G   
Sbjct: 683 FAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMP 742

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V   +  ID   + G ++ A+   ++     D +++ T + A   H    E  EI  K 
Sbjct: 743 RVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHK-DEERGEIAAK- 800

Query: 643 KLANLQPSQATFVSVMS 659
           +L  L+P  ++   ++S
Sbjct: 801 ELVELEPQNSSTYVLLS 817



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 164/721 (22%), Positives = 307/721 (42%), Gaps = 51/721 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA +LS    L + V G Q H    K G  +  F    L+ MY++CG  G   
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF  ++  + V W  ++S   + G F   + ++  M+  G  P+     +V+    ++G
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E   ++        + + P    +V                           WNA+I 
Sbjct: 147 RLEDARTL--------LHRMPAPSSTV--------------------------AWNAVIS 172

Query: 220 GYA-HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           GYA   G   E   +   M   G+   + TF + L   +    F  GRQ+H   +R  ++
Sbjct: 173 GYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLD 232

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ + ++LI++Y K   +  A  VF+   +K+V+ WN +  G   N+   +   +F   
Sbjct: 233 ANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYM 292

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
              G   +  T+  +L  C  L    LG Q+QC+ +         V ++ + M  + GA+
Sbjct: 293 KRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAI 352

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A ++F+ ++YK+  +WN LL G   N  D + +     +   GV  +  +F  V+  C
Sbjct: 353 DDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINAC 412

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                 +   QIH   +K    S   + SSLI  Y   G +++  +     +   +    
Sbjct: 413 SNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRN 472

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            +++ LV      EA+ +F  ++  G KP  +   +IL+ C  + +    K +H + +K 
Sbjct: 473 VLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKS 532

Query: 579 GF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           GF N +  V  +++  Y K    + A     +  +  +++ +  ++  YA +G   +++ 
Sbjct: 533 GFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLL 592

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCL 693
            F +M+  ++ P + TF S++ ACS    +  G     L+ KS    Y    S      +
Sbjct: 593 SFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSA-----I 647

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           +DM S+ G +  +    + +  +   T++ S++ G   +G      +A E LLL     D
Sbjct: 648 IDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNG------YADEALLLFQKMQD 701

Query: 754 A 754
           +
Sbjct: 702 S 702



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 236/526 (44%), Gaps = 40/526 (7%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P++F + + +  C  +GA   G   HC A K  +    F   +++N YA+ G V  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RVF  IS  D  CW +MI GY   G   EA+ + + M   G + D+ T +  +  C+L 
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV--CALT 143

Query: 260 ADFDIGR--QIHGLIIRSEVECSISIVNALIDMYIKSSGMDY-AFKVFERMADKDVISWN 316
           A   +GR      L+ R     S    NA+I  Y + SG+++  F ++     KD+  W 
Sbjct: 144 A---LGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLY-----KDMRCW- 194

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
                                    G  P   TF+ +L           G Q+   A+  
Sbjct: 195 -------------------------GLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRH 229

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G      V SSLI ++ +CG +  A  VFD    KN+  WN +L+G   N    + ++ F
Sbjct: 230 GLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMF 289

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G+E +  T+  V+  C   ++  +  Q+    IK    +  ++ ++ +  +  F
Sbjct: 290 LYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKF 349

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D++    N     D  SW A++  L H   + EA+ +   +   G  PDE    T++
Sbjct: 350 GAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVI 409

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           N+C+ I A +  K IH   +K    +   V S++ID Y+K GD++  R    Q  +++ +
Sbjct: 410 NACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQ-VDASSI 468

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +  N LI     +    EA+++F ++    L+PS  TF S++S C+
Sbjct: 469 VPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT 514



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 258/571 (45%), Gaps = 39/571 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D       L    +L S  LG QV    +K      +F+ N  + M+SK G      
Sbjct: 297 LEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAK 356

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ +  ++ VSW  ++     N E +  + M   M  +G  P+E +  +V+  C ++ 
Sbjct: 357 TLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIR 416

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A+E G  IHC A+K  I  N  VG S+++FY+K GDV +  +V   + +  +   N +I 
Sbjct: 417 ATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIA 476

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VE 278
           G        EA+++   +L +G+    +TF + L GC+ +    IG+Q+H   ++S  + 
Sbjct: 477 GLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLN 536

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
              S+  +L+  Y+K+   + A K+   M D K+++ W  +  G+++N    Q+   F +
Sbjct: 537 DDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWR 596

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                  P+ VTF+ +L+ C ++  L  G ++  L +  GF   +  TS++I M+ +CG 
Sbjct: 597 MRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGD 656

Query: 398 VEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           +  +   F  + S ++IT WN ++ G+  N    + L  F  + +S ++ +  TF  V+ 
Sbjct: 657 IISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLI 716

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C            H  +I  G     +   S+ K Y    ++D+               
Sbjct: 717 ACA-----------HAGLISEG----RHYFDSMSKVYGIMPRVDH--------------- 746

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           +   +  L   GH  EA  + + L     +PD  I  T L +C      +R +     ++
Sbjct: 747 YACFIDLLGRGGHLQEAQEVINEL---PFRPDGVIWATYLAACRMHKDEERGEIAAKELV 803

Query: 577 KL-GFNTEVYVASAVIDAYAKCGDIKGARMA 606
           +L   N+  YV   + + YA  G+   A+MA
Sbjct: 804 ELEPQNSSTYV--LLSNMYAAAGNWVEAKMA 832


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 212/749 (28%), Positives = 372/749 (49%), Gaps = 8/749 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  L    NL     G QVH  ++    + D +    ++ MY+ CG F    ++F 
Sbjct: 31  PRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFY 90

Query: 104 EMAER--NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
            +  R  ++  W  I+S+ ++ G  +  L  Y  M   G  P+      ++K CV++   
Sbjct: 91  RLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 150

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           +    +      + ++ N FV  S++  Y + G +  A ++F  +   D   WN M+ GY
Sbjct: 151 KGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGY 210

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A CG     +   S M  + I+ +  TF   L  C+     D+G Q+HGL++ S ++   
Sbjct: 211 AKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEG 270

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           SI N+L+ MY K    D A K+F  M+  D ++WN +  G+ ++    ++   F++ I S
Sbjct: 271 SIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISS 330

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+ +TFS LL    K  +L+   Q+ C  +      +  +TS+LI  + +C  V MA
Sbjct: 331 GVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 390

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +F   +  ++  +  ++SGY  N  + D L+ F  + +  +  N  T   ++      
Sbjct: 391 QKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGL 450

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              ++  ++HG IIK GF +   I  ++I  Y   G+++ ++E      + D+ SW +M+
Sbjct: 451 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMI 510

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +      +   A+ IF  +  +G   D   +   L++CA + +    K+IH F+IK    
Sbjct: 511 TRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLA 570

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            +VY  S +ID YAKCG++K A   FD +    +++ +N++I AY +HG + +++ +F +
Sbjct: 571 LDVYSESTLIDMYAKCGNLKAAMNVFD-TMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHE 629

Query: 642 M-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           M + +  +P Q TF+ ++S C H G VD+G   F+SM   YG+QP  + Y C+VD+  R 
Sbjct: 630 MVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRA 689

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L +A   ++ MPF P   V+ +LL   R+H N EL + AS +L+ L P N   +VL+S
Sbjct: 690 GRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLIS 749

Query: 761 KRKRQREGNLLDHEGVCNVNDGIKTVDLK 789
                   N  + E V  V   +K  +++
Sbjct: 750 ----NAHANTGEWESVTKVRSLMKEREVQ 774



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 4/201 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + ++ +LS   NL S   G  +HG ++K     D++ ++ LI MY+KCG     + VF
Sbjct: 537 DCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVF 596

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
           D M E+N+VSW  I++A   +G+    L ++ +M + +G  P++     ++ +C  +G  
Sbjct: 597 DTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDV 656

Query: 162 EFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIG 219
           + G            I+        V++ + + G ++ A     S+    D G W  ++G
Sbjct: 657 DEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLG 716

Query: 220 GYAHCGYGFEALNVVSSMLFE 240
             +      E   V SS L +
Sbjct: 717 A-SRLHKNVELAKVASSRLMD 736


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 186/663 (28%), Positives = 345/663 (52%), Gaps = 7/663 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FDE   +++  +  ++    +N      L ++ D+ ++G   +   +   +KVC  + 
Sbjct: 59  QLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLF 118

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +HC +LK    ++  VG S+++ Y K  D      +F  +   +V  W +++ 
Sbjct: 119 DQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS 178

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G   E +++++ M  EG+  + +TF   L   +  +  + G Q+H +I+++  E 
Sbjct: 179 GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEF 238

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +  + NALI MY+KS  +  A  VF+ M  +D ++WN + GG++      +   +FH+  
Sbjct: 239 TTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMR 298

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L+G + +   F   L+ C +  +L+   QL C  +  G+   +++ ++L+  + +C +V+
Sbjct: 299 LAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVD 358

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  +F    +  N+ TW  ++ G+  N  +   +  FC +   GV  N  T+     T 
Sbjct: 359 EAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTY----STV 414

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
              +   ++ Q+H  IIK  +     + ++L+ +YV  G +  S          D+ +W 
Sbjct: 415 LAGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWS 474

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIK 577
           AM++ L     + +A+ +F  LV+ G KP+EY   +++N+C++  A  +  K IH   +K
Sbjct: 475 AMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVK 534

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G +  + V+SA++  Y+K G+I+ A   F +     D++ +N++I  Y  HG   +A+E
Sbjct: 535 SGKSNALCVSSALLTMYSKKGNIESAEKVFTRQ-EERDIVSWNSMITGYGQHGDAKKALE 593

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F  M+   L     TF+ V++AC+H GLV++G   F  M   Y +    + Y C+VD+ 
Sbjct: 594 VFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLY 653

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           SR G  + A  +I  MPF  SPT++R+LL+ CR+H N ELG+ A+EKL+ L P +   +V
Sbjct: 654 SRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYV 713

Query: 758 LLS 760
           LLS
Sbjct: 714 LLS 716



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 173/622 (27%), Positives = 290/622 (46%), Gaps = 13/622 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+ +L +   L  +V+G QVH   +K GF  D+ +  +L+ MY K   F  G  +F
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DEM  +N+VSWT ++S   +NG  D  + +   M+  G  PN F   +V+         E
Sbjct: 163 DEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIE 222

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H   +K   E   FV  +++  Y K   V  AE VF S+   D   WN MIGGYA
Sbjct: 223 GGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYA 282

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G+  E   +   M   G+ + +  F  AL+ CS   + +  +Q+H  ++++  E +  
Sbjct: 283 AIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQD 342

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I  AL+  Y K S +D AFK+F  MAD   +V++W  + GGF +N N  +   LF +   
Sbjct: 343 IRTALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSR 401

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RPNH T+S +L   GK   L   L  Q +  +  +    +V ++L+  + + G V  
Sbjct: 402 EGVRPNHFTYSTVL--AGKPSSLLSQLHAQIIKAY--YEKVPSVATALLDAYVKTGNVVE 457

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  VF ++  K+I  W+ +L+G          ++ F  + + GV+ N  TF  V+  C  
Sbjct: 458 SARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSS 517

Query: 461 SENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           S      G QIH   +K+G S+   + S+L+  Y   G ++++ +     E  D+ SW +
Sbjct: 518 SAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNS 577

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-L 578
           M++     G   +A+ +F  +   G   D+     +L +C   G  +  +     +IK  
Sbjct: 578 MITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDY 637

Query: 579 GFNTEVYVASAVIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
             + ++   S ++D Y++ G   K   +     F ++  I    L     H  L    + 
Sbjct: 638 HIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNL---ELG 694

Query: 638 IFDKMKLANLQPSQATFVSVMS 659
                KL +LQP+ A    ++S
Sbjct: 695 KLAAEKLVSLQPNDAVGYVLLS 716



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/584 (23%), Positives = 278/584 (47%), Gaps = 11/584 (1%)

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K  +++G      SIH   +K  +  + F+    L F +       A ++F      D+ 
Sbjct: 13  KAKITVGNGRLQSSIH--HIKHFLHPHGFLYHQSLPFISLPSRPRYAHQLFDETPLKDIS 70

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            +N ++  ++   +  EAL++   +   G+ +D  T   AL+ C ++ D  +GRQ+H   
Sbjct: 71  HYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQVHCQS 130

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++S     +S+  +L+DMY+K+   +    +F+ M  K+V+SW +L  G++ N    +  
Sbjct: 131 LKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVI 190

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            L ++  + G  PN  TF+ +L        ++ G+Q+  + +  GF     V ++LI M+
Sbjct: 191 HLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMY 250

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +   V  A +VFD++  ++  TWN ++ GY       +  + F  +  +GV+++   F 
Sbjct: 251 LKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFC 310

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAER 511
             ++ C +        Q+H  ++K G+     I ++L+ +Y     +D +F+ FS     
Sbjct: 311 TALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAA 370

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ +W AM+   V   +N +AV +F  +   G +P+ +   T+L    A         +
Sbjct: 371 HNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVL----AGKPSSLLSQL 426

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGD-IKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           H  +IK  +     VA+A++DAY K G+ ++ AR+ +  S  + D++ ++ ++   A   
Sbjct: 427 HAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFY--SIPAKDIVAWSAMLTGLAQTR 484

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +AME+F ++    ++P++ TF SV++ACS      +      +   + G   +    
Sbjct: 485 DSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVS 544

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             L+ M S+ G +E A+ V      +     + S+++G   HG+
Sbjct: 545 SALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHGD 587


>gi|302801269|ref|XP_002982391.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
 gi|300149983|gb|EFJ16636.1| hypothetical protein SELMODRAFT_116290 [Selaginella moellendorffii]
          Length = 779

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 201/711 (28%), Positives = 360/711 (50%), Gaps = 13/711 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH HI +LG   DI+  N LI MY KC       ++F  M   N+VSWT ++    Q
Sbjct: 78  GRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQ 137

Query: 123 NGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            G      + ++  M+  G  PN   + +V++ C        G  +H + L+  +  +  
Sbjct: 138 YGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTD----GRQVHGYVLEAGMSLDTS 193

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++ Y K G V  A+ V   +   DV  WN MI GYA  G   E L  +  M  +G
Sbjct: 194 LGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDG 253

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++  K T+   L  CS   D   G+ IH  ++   ++    + + L+ MY K   ++   
Sbjct: 254 LSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVK 313

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +    + +++ I+WNT+ G ++   +  Q    F +  L G + + VTF ++L  C    
Sbjct: 314 RSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGVKADAVTFVLMLGTCSSPA 373

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G+ L       GF +   V +SL  M+ +CG+++ A  +F+ +  +N  +WN L+S
Sbjct: 374 HLAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEEMPSRNSVSWNSLMS 432

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               + C AD  K F  +   G   +  T   +++ C +  N +    IH  ++++GF  
Sbjct: 433 AAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDK 492

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y   G  + +    +     +  SW  +++A V +G N +AV +F  + 
Sbjct: 493 RTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD 552

Query: 542 EAGEKPDEYILGTILNSCAAI-GAYQRTKSIHPFVIKLGFNT--EVYVASAVIDAYAKCG 598
            A +K   Y+    L++C+ + G     K IH +++  GF+   +   A+A+++ Y KCG
Sbjct: 553 VARDKV-TYV--AALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCG 609

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ AR  FD   +  DV+ + +LI+AYA H  + +A+++   M+   ++     F+S++
Sbjct: 610 SLQEARKIFDGMLH-RDVVTWTSLIVAYAQHSEIEQALKLVKIMEQEGVKVDDVVFLSIL 668

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           S C H GL+++GC  F SM   YG+ P  + Y C++D+L R G+L+ A+ +++ +P +  
Sbjct: 669 SGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSD 728

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGN 769
             V+ +LL+ CR+HGN E G+ A+ ++ LL P   AA+V+LS    Q + +
Sbjct: 729 SKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLSNIYTQTQAS 779



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 302/631 (47%), Gaps = 15/631 (2%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD--MGLKMYVDMKTNGFMPNE 145
           MY KCG       VF ++   ++ +W+ ++  A  N E D    L++Y  M+  G  P+ 
Sbjct: 1   MYGKCGDLDAASEVFGKLDPLHVAAWSALL-GAYANSENDAVQALELYKRMQLEGVRPDS 59

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
               + +K C   GA   G  +H    ++ +E + +   +++N Y K      A ++F  
Sbjct: 60  VTFVTCLKACTVEGALGDGRKVHAHIRELGLETDIYAANALINMYGKCRSPEDAFQLFSR 119

Query: 206 ISSDDVGCWNAMIGGYAHCGY-GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
           + S +V  W ++IG +A  G+ G E++ +   M  EGI  +  T +  L+ C+L      
Sbjct: 120 MESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTD---- 175

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           GRQ+HG ++ + +    S+ NAL+DMY K+ G+D A  V   M  +DVISWN +  G+++
Sbjct: 176 GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGGVDEADVVLREMPKRDVISWNIMISGYAQ 235

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           + +  +      +    G  P  VT++ LL  C    DL  G  +    +  G   +E V
Sbjct: 236 SGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSEEDLGEGKSIHRSVVDMGLDRDEVV 295

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S L+ M+ +CG++E        V  +N   WN ++  Y         L++F  +   GV
Sbjct: 296 KSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLEGV 355

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + +  TF  ++ TC    +      +H  I + GF S   + +SL   Y   G LD + +
Sbjct: 356 KADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESI-IVHNSLTAMYAKCGSLDAARK 414

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                   +  SW ++MSA +  G + +A   F  +   G +PDE    ++L++C     
Sbjct: 415 MFEEMPSRNSVSWNSLMSAAIQHGCHADAHKFFQRMKLEGSRPDEVTCISMLDACTKQAN 474

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +   SIH  V++ GF+    VA+A+I  YAK GD + AR  FD     N  + +NT++ 
Sbjct: 475 AKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERN-TVSWNTILA 533

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH-KGLVDKGCLLFKSM-DSQYG 682
           AY   GL  +A+E+F KM +A     + T+V+ + ACS   G +  G L+   M D  + 
Sbjct: 534 AYVEKGLNRDAVEMFWKMDVAR---DKVTYVAALDACSGLAGGLAHGKLIHGYMLDHGFS 590

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            +        LV+M  + G L++A+ + + M
Sbjct: 591 NRLDTVAATALVNMYGKCGSLQEARKIFDGM 621


>gi|302817567|ref|XP_002990459.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
 gi|300141844|gb|EFJ08552.1| hypothetical protein SELMODRAFT_131642 [Selaginella moellendorffii]
          Length = 830

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 197/704 (27%), Positives = 345/704 (49%), Gaps = 13/704 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-EMAERNLVSWTLIVSAAI 121
           G +VH  I    F   + +   L+ MY+KCG      RVFD  +  +N+VSWT +VSA +
Sbjct: 128 GRRVHRRIQGSDFEWSVDVGTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYV 187

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + G  +  L ++++M   G  PNE    SV+  C      + G  +H    +  ++ + F
Sbjct: 188 ERGCLEQALTLFIEMLQEGVAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAF 243

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++  Y + G +  A  VF  I+  ++  WN+MI GYA        L     ML +G
Sbjct: 244 VGNALIKMYRRCGSLEDASLVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDG 303

Query: 242 ITMDKYTFINALQGCSLVADFDIG--RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
              DK+T +  L  C+  +       + IH L + S ++    +  AL+ +  +      
Sbjct: 304 WKGDKHTLLTVLDACAKSSTLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKS 363

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC-- 357
           A  VF+ +  KD+ +WN +F  ++++        L  +  L   RP+ VTF  +L  C  
Sbjct: 364 AKMVFDSLRAKDLAAWNCMFSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTA 423

Query: 358 -GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            G  L L+ G +     L  G+  +  + ++L+ M+  CG ++ A  VF+ +  +++ +W
Sbjct: 424 TGSSLGLETGKKTHEEILEQGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISW 483

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +L  Y       +   TF  I   G   +       +  C    N       H  I +
Sbjct: 484 TTMLGAYTQARLLDEASITFRRIQLEGHTPDRVALIAALGACT---NLSSARDFHERIRQ 540

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G+     + ++L++ Y   G L+++ E  +G     + SW  +++A    GH   A  +
Sbjct: 541 LGWEKDPLVANALLEVYSACGSLEDANETFDGIGEPSVISWNLLIAAHTRLGHPDRAFDL 600

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
             ++   G  PD   L T++NS A++  +++ K IH  +++ G   +  VA+A+++ Y K
Sbjct: 601 LRAMELQGHNPDSVTLATVINSRASLQLFRKGKIIHDSILEAGMEIDSVVATALVNFYGK 660

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGD   AR  F     +++V+ +N+ + AYA  G  SEA+ +  +M    + P+  TFVS
Sbjct: 661 CGDFATARSIFQGVGAADNVVTWNSTLAAYAQSGHASEALHVLAEMVQQGVAPTAVTFVS 720

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+S C H G+ D GC LF S+   Y M P P+ YGC++D+L+R G+LE+A+ +++ MP  
Sbjct: 721 VLSVCGHAGVADVGCHLFSSLRWDYDMDPIPEHYGCMIDLLARGGWLEEARQLLKTMPTT 780

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P    + +LLSGC      + G + + +LL    ++ +AH+ +S
Sbjct: 781 PDSIKWMALLSGCHGASVDKTGVFMAMQLLQQNTQSSSAHIAIS 824



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 264/554 (47%), Gaps = 15/554 (2%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H   +   ++KN  +   +++ Y     V  A +VF  ++S D G W  M+  YA 
Sbjct: 27  GKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLWAPMMAAYAR 86

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  EA  +   ML EG+  D+ T +  +  CS       GR++H  I  S+ E S+ +
Sbjct: 87  VGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQGSDFEWSVDV 146

Query: 284 VNALIDMYIKSSGMDYAFKVFE-RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             AL+ MY K   +D A +VF+ R+  K+++SW T+   + E     Q  +LF + +  G
Sbjct: 147 GTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQEG 206

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             PN +T+  +L  C    DLD G ++  L    G   +  V ++LI M+ RCG++E A 
Sbjct: 207 VAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDAS 262

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            VFD ++ +N+  WN +++GY         L+ F  +   G + +  T   V++ C +S 
Sbjct: 263 LVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSS 322

Query: 463 NQQM--VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
             Q   +  IH   +++G  S   + ++L+K     G   ++    +     D+A+W  M
Sbjct: 323 TLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCM 382

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA---YQRTKSIHPFVIK 577
            SA    G   +A+ +   +     +PD+    +IL++C A G+    +  K  H  +++
Sbjct: 383 FSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILE 442

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G+  +  + +A++  YA CG +  A++ F++   S D+I + T++ AY    L+ EA  
Sbjct: 443 QGYRLDAVLGTALVRMYAACGRLDDAKLVFEK-MESRDLISWTTMLGAYTQARLLDEASI 501

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F +++L    P +   ++ + AC++          F     Q G +  P     L+++ 
Sbjct: 502 TFRRIQLEGHTPDRVALIAALGACTNLSSARD----FHERIRQLGWEKDPLVANALLEVY 557

Query: 698 SRNGYLEDAKHVIE 711
           S  G LEDA    +
Sbjct: 558 SACGSLEDANETFD 571



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 166/672 (24%), Positives = 305/672 (45%), Gaps = 15/672 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  IV  G   ++ L N ++ MY  C       +VFD+MA R+   W  +++A  +
Sbjct: 27  GKELHAQIVSDGLDKNLHLANGIVHMYLVCKSVDNARKVFDKMASRDAGLWAPMMAAYAR 86

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G       ++  M   G +P+   + +V+  C   G+   G  +H        E +  V
Sbjct: 87  VGHLQEATGLFHRMLDEGVVPDRVTLLTVINACSESGSLAEGRRVHRRIQGSDFEWSVDV 146

Query: 183 GCSVLNFYAKLGDVAAAERVFYS-ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           G +++  YAK G V  A RVF + +   ++  W  M+  Y   G   +AL +   ML EG
Sbjct: 147 GTALVRMYAKCGSVDEARRVFDNRLLRKNIVSWTTMVSAYVERGCLEQALTLFIEMLQEG 206

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ T+++ L  C    D D GR++H LI +S ++    + NALI MY +   ++ A 
Sbjct: 207 VAPNEITYVSVLNAC----DLDAGRKVHRLIEQSGLDSDAFVGNALIKMYRRCGSLEDAS 262

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF+ +AD++++ WN++  G++       T   F K +L G + +  T   +L  C K  
Sbjct: 263 LVFDGIADRNLLVWNSMIAGYASLNEAQGTLEFFRKMLLDGWKGDKHTLLTVLDACAKSS 322

Query: 362 DLDL-GLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            L    LQ +  LA+  G   +  V ++L+ +    G  + A  VFD++  K++  WN +
Sbjct: 323 TLQASSLQTIHDLAVESGLDSDTLVGTALVKIKSEQGDRKSAKMVFDSLRAKDLAAWNCM 382

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ---QMVGQIHGAIIK 476
            S Y  +    D ++    +    V  +  TF  ++  C  + +    +   + H  I++
Sbjct: 383 FSAYAKHGRLRDAMELQEQMKLDQVRPDKVTFVSILSACTATGSSLGLETGKKTHEEILE 442

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G+     + ++L++ Y   G+LD++       E  D+ SW  M+ A        EA   
Sbjct: 443 QGYRLDAVLGTALVRMYAACGRLDDAKLVFEKMESRDLISWTTMLGAYTQARLLDEASIT 502

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +   G  PD   L   L +C  + +    +  H  + +LG+  +  VA+A+++ Y+ 
Sbjct: 503 FRRIQLEGHTPDRVALIAALGACTNLSS---ARDFHERIRQLGWEKDPLVANALLEVYSA 559

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG ++ A   FD       VI +N LI A+   G    A ++   M+L    P   T  +
Sbjct: 560 CGSLEDANETFD-GIGEPSVISWNLLIAAHTRLGHPDRAFDLLRAMELQGHNPDSVTLAT 618

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+++ +   L  KG ++  S+  + GM+        LV+   + G    A+ + + +   
Sbjct: 619 VINSRASLQLFRKGKIIHDSI-LEAGMEIDSVVATALVNFYGKCGDFATARSIFQGVGAA 677

Query: 717 PSPTVYRSLLSG 728
            +   + S L+ 
Sbjct: 678 DNVVTWNSTLAA 689


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 182/729 (24%), Positives = 375/729 (51%), Gaps = 34/729 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   +VK G   ++F+   L+  Y++ G+    +   DE+   ++V+W  +++  ++  
Sbjct: 196 QLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKIL 255

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            ++    ++  M   G  P+ F   S ++VC ++ + + G  +H   +    + + FVG 
Sbjct: 256 SWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGN 315

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK  D  +  +VF  +   +   WN++I   A  G+  +AL +   M   G   
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++   + L   + +AD   GR++HG ++R+ +   I + +AL+DMY K   ++ A +VF
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVF 435

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDL 363
             + +++ +S+N L  G+ +     +   L+H      G +P+  TF+ LL  C    + 
Sbjct: 436 RSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRND 495

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G Q+    +         V + L++M+  CG +  A  +F+ ++ +N  +WN ++ GY
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 555

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG----- 478
             N    + L+ F  +  +G++ +  +   ++ +C    + Q   ++H  I++       
Sbjct: 556 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEG 615

Query: 479 ---------FSSCG-----------------YICSSLIKSYVNFGQLDNSFEFSNGAERL 512
                    ++ CG                  + + ++ ++VN G+ +++    +  E+ 
Sbjct: 616 ILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQR 675

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           + A W ++++   ++G   E+   F  ++E+  + D   + TI+N C+++ A +    +H
Sbjct: 676 NTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLH 735

Query: 573 PFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             +IK GF N  V + +A++D Y+KCG I  AR  FD + N  +++ +N +I  Y+ HG 
Sbjct: 736 SLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFD-NMNGKNIVSWNAMISGYSKHGC 794

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ ++++M    + P++ TF++++SACSH GLV++G  +F SM   Y ++   + Y 
Sbjct: 795 SKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYT 854

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R G LEDAK  +E MP +P  + + +LL  CR+H + ++G  A+++L  L P+
Sbjct: 855 CMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQ 914

Query: 752 NDAAHVLLS 760
           N   +V++S
Sbjct: 915 NPGPYVIMS 923



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/608 (26%), Positives = 301/608 (49%), Gaps = 9/608 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSA 119
           G  +H  ++  G+  D +L   ++ +Y++ G      +  ++F+EM ERNL +W  ++ A
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             +  ++   L++Y  M+ +G   ++F   SV+K C++M        +    +K  +  N
Sbjct: 150 YARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN 209

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FVG ++++ YA+ G +  A      I    V  WNA+I GY       EA  +   ML 
Sbjct: 210 LFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLK 269

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  D +TF +AL+ C  +   D G+Q+H  +I    +    + NALIDMY K    + 
Sbjct: 270 IGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
             KVF+ M +++ ++WN++    ++  +      LF +   SG + N      +L     
Sbjct: 330 CLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAG 389

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L D+  G +L    +      +  + S+L+ M+ +CG VE AH VF ++  +N  ++N L
Sbjct: 390 LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNAL 449

Query: 420 LSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           L+GY       + L+ + ++  E G++ +  TF  ++  C    N     QIH  +I+  
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 509

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            +    + + L+  Y   G+L+ + E  N     +  SW +M+      G   EA+ +F 
Sbjct: 510 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 569

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G KPD + L ++L+SC ++   Q+ + +H F+++     E  +   ++D YAKCG
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 629

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A   +DQ+    DVI+ N ++ A+ + G  ++A  +FD+M+    Q + A + S++
Sbjct: 630 SMDYAWKVYDQTI-KKDVILNNVMVSAFVNSGRANDAKNLFDQME----QRNTALWNSIL 684

Query: 659 SACSHKGL 666
           +  ++KGL
Sbjct: 685 AGYANKGL 692



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 184/723 (25%), Positives = 324/723 (44%), Gaps = 78/723 (10%)

Query: 35  CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           C D+F        A +L +   L+SR  G QVH  ++  GF  D F+ N LI MY+KC  
Sbjct: 273 CPDNFT------FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 326

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
               L+VFDEM ERN V+W  I+SA  Q G F+  L +++ M+ +G+  N F +GS++  
Sbjct: 327 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMA 386

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
              +     G  +H   ++  +  +  +G ++++ Y+K G V  A +VF S+   +   +
Sbjct: 387 SAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSY 446

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           NA++ GY   G   EAL +   M  E GI  D++TF   L  C+   + + GRQIH  +I
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           R+ +  +I +   L+ MY +   ++YA ++F RMA+++  SWN++  G+ +N    +   
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALR 566

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF +  L+G +P+  + S +L  C  L D   G +L    +     +E  +   L+ M+ 
Sbjct: 567 LFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYA 626

Query: 394 RCGAVEMAHSV-------------------------------FDNVSYKNITTWNELLSG 422
           +CG+++ A  V                               FD +  +N   WN +L+G
Sbjct: 627 KCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAG 686

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       +    F  + ES +E +  T   +V  C      +   Q+H  IIK GF +C
Sbjct: 687 YANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNC 746

Query: 483 GYIC-SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +  ++L+  Y   G +  +    +     ++ SW AM+S     G + EA+ ++  + 
Sbjct: 747 SVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 806

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           + G  P+E     IL++C+  G  +    I   +       E Y   A  + Y    D+ 
Sbjct: 807 KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM------QEDYNIEAKAEHYTCMVDLL 860

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           G                           G + +A E  +KM    ++P  +T+ +++ AC
Sbjct: 861 G-------------------------RAGRLEDAKEFVEKMP---IEPEVSTWGALLGAC 892

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY---LEDAKHVIEIMPFQPS 718
                +D G L  + +       P P  Y  + ++ +  G    +ED + ++++   +  
Sbjct: 893 RVHKDMDMGRLAAQRLFELDPQNPGP--YVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKD 950

Query: 719 PTV 721
           P V
Sbjct: 951 PGV 953



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 270/577 (46%), Gaps = 16/577 (2%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG---DVAAAE 200
           N     S+++ C+   + + G SIH   +      + ++   +L  YA+ G   D+  A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           ++F  +   ++  WN MI  YA      E L +   M   G   DK+TF + ++ C  + 
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAME 189

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D    RQ+   ++++ + C++ +  AL+D Y +   MD A    + +    V++WN +  
Sbjct: 190 DMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIA 249

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +  +  +   +F + +  G  P++ TF+  LR CG L   D G Q+    + CGF  
Sbjct: 250 GYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V ++LI M+ +C   E    VFD +  +N  TWN ++S         D L  F  + 
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           ESG + N      ++       +     ++HG +++   +S   + S+L+  Y   G ++
Sbjct: 370 ESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVE 429

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSC 559
            + +        +  S+ A+++  V +G   EA+ ++H +  E G +PD++   T+L  C
Sbjct: 430 EAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC 489

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A      + + IH  +I+      + V + ++  Y++CG +  A+  F++    N    +
Sbjct: 490 ANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN-AYSW 548

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-----SHKGLVDKGCLLF 674
           N++I  Y  +G   EA+ +F +M+L  ++P   +  S++S+C     S KG      ++ 
Sbjct: 549 NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR 608

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            +M+ +  +Q        LVDM ++ G ++ A  V +
Sbjct: 609 NTMEEEGILQV------VLVDMYAKCGSMDYAWKVYD 639



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 6/221 (2%)

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN--- 501
           +VN   +  +++ C  S + Q    IH  +I  G++   Y+ + ++  Y   G LD+   
Sbjct: 68  DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127

Query: 502 -SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
               F    ER ++ +W  M+ A        E + ++  +  +G   D++   +++ +C 
Sbjct: 128 ARKLFEEMPER-NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI 186

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           A+      + +   V+K G N  ++V  A++D YA+ G +  A  + D+      V+ +N
Sbjct: 187 AMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDE-IEGTSVVTWN 245

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            +I  Y       EA  IFD+M    + P   TF S +  C
Sbjct: 246 AVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC 286


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/610 (30%), Positives = 322/610 (52%), Gaps = 1/610 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ CV       G  +H   L+  ++ N ++  ++L  YA  G V  A ++F   S+  
Sbjct: 34  LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKS 93

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN MI GYAH G   EA N+ + M  E +  DK+TF++ L  CS  A  + GR+IH 
Sbjct: 94  VVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHV 153

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            ++ + +    ++ NALI MY K   +  A +VF+ MA +D +SW TL G ++E+    +
Sbjct: 154 RVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEE 213

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           +   +H  +    RP+ +T+  +L  CG L  L+ G Q+    +   +  +  V+++L  
Sbjct: 214 SLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTK 273

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CGA + A  VF+ +SY+++  WN ++ G+  +    +   TF  + E GV  +  T
Sbjct: 274 MYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRAT 333

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  V+  C R        +IH    K G  S     ++LI  Y   G + ++ +  +   
Sbjct: 334 YTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 393

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           + D+ SW  ++          E+ T F  +++ G K ++     +L +C+   A +  K 
Sbjct: 394 KRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKE 453

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           IH  V+K G   ++ V +A++  Y KCG ++ A   F +  +  DV+ +NTLI     +G
Sbjct: 454 IHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVF-EGMSMRDVVTWNTLIGGLGQNG 512

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              EA++ ++ MK   ++P+ ATFV+V+SAC    LV++G   F  M   YG+ P+   Y
Sbjct: 513 RGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHY 572

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L+R G+L +A+ VI  +P +PS  ++ +LL+ CRIH N E+GE A+E  L L P
Sbjct: 573 ACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEP 632

Query: 751 KNDAAHVLLS 760
           +N   +V LS
Sbjct: 633 QNAGLYVSLS 642



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 145/550 (26%), Positives = 270/550 (49%), Gaps = 7/550 (1%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K   +G QVH HI++ G   ++++ N L+ +Y+ CG      ++FD+ + +++VSW +++
Sbjct: 42  KDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMI 101

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S     G       ++  M+     P++F   S++  C S     +G  IH   ++  + 
Sbjct: 102 SGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLA 161

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  VG ++++ YAK G V  A RVF +++S D   W  + G YA  GYG E+L    +M
Sbjct: 162 NDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAM 221

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           L E +   + T++N L  C  +A  + G+QIH  I+ SE    + +  AL  MY+K    
Sbjct: 222 LQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAF 281

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A +VFE ++ +DVI+WNT+  GF ++    +    FH+ +  G  P+  T++ +L  C
Sbjct: 282 KDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSAC 341

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +   L  G ++   A   G + +    ++LI M+ + G+++ A  VFD +  +++ +W 
Sbjct: 342 ARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 401

Query: 418 ELLSGYCFNCCDADV--LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
            LL  Y    CD  V    TF  + + GV+ N  T+  V++ C      +   +IH  ++
Sbjct: 402 TLLGRYAD--CDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVV 459

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G  +   + ++L+  Y   G ++++     G    D+ +W  ++  L   G   EA+ 
Sbjct: 460 KAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQ 519

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGF-NTEVYVASAVIDA 593
            +  +   G +P+      +L++C      +  +    F+ K  G   TE + A  ++D 
Sbjct: 520 RYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYA-CMVDI 578

Query: 594 YAKCGDIKGA 603
            A+ G ++ A
Sbjct: 579 LARAGHLREA 588



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 240/501 (47%), Gaps = 3/501 (0%)

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           +   +V+  +  +G  +D Y ++  LQ C    D  +G+Q+H  I+R  V+ ++ I N L
Sbjct: 10  YAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTL 69

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           + +Y     ++ A ++F++ ++K V+SWN +  G++      +  +LF         P+ 
Sbjct: 70  LKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDK 129

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            TF  +L  C     L+ G ++    +  G  ++  V ++LI M+ +CG+V  A  VFD 
Sbjct: 130 FTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDA 189

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++ ++  +W  L   Y  +    + LKT+  + +  V  +  T+  V+  C      +  
Sbjct: 190 MASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKG 249

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            QIH  I+++ + S   + ++L K Y+  G   ++ E        D+ +W  M+   V  
Sbjct: 250 KQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDS 309

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   EA   FH ++E G  PD     T+L++CA  G   R K IH    K G  ++V   
Sbjct: 310 GQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFG 369

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+I+ Y+K G +K AR  FD+     DV+ + TL+  YA    V E+   F +M    +
Sbjct: 370 NALINMYSKAGSMKDARQVFDR-MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           + ++ T++ V+ ACS+   +  G  +   +  + G+         L+ M  + G +EDA 
Sbjct: 429 KANKITYMCVLKACSNPVALKWGKEIHAEV-VKAGLLADLAVTNALMSMYFKCGSVEDAI 487

Query: 708 HVIEIMPFQPSPTVYRSLLSG 728
            V E M  +   T + +L+ G
Sbjct: 488 RVFEGMSMRDVVT-WNTLIGG 507



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 183/390 (46%), Gaps = 2/390 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R   I     LS   +L +   G Q+H HIV+  + +D+ +   L  MY KCG F    
Sbjct: 226 VRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAR 285

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ ++ R++++W  ++   + +G+ +     +  M   G  P+     +V+  C   G
Sbjct: 286 EVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPG 345

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH  A K  +  +   G +++N Y+K G +  A +VF  +   DV  W  ++G
Sbjct: 346 GLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLG 405

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            YA C    E+      ML +G+  +K T++  L+ CS       G++IH  ++++ +  
Sbjct: 406 RYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLA 465

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +++ NAL+ MY K   ++ A +VFE M+ +DV++WNTL GG  +N    +    +    
Sbjct: 466 DLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMK 525

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             G RPN  TF  +L  C     ++ G  Q   ++   G +  E   + ++ +  R G +
Sbjct: 526 SEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHL 585

Query: 399 EMAHSVFDNVSYK-NITTWNELLSGYCFNC 427
             A  V   +  K +   W  LL+    +C
Sbjct: 586 REAEDVILTIPLKPSAAMWGALLAACRIHC 615


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 203/730 (27%), Positives = 367/730 (50%), Gaps = 5/730 (0%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQ C  S  +K   + +  L    + +S  +   +HG IVK     D  L  +L+ +Y+K
Sbjct: 102 NQVCWSS--KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAK 159

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C Y  +   V  +M +R++VSWT ++   +  G  +  + ++ +M+  G MPNEF + + 
Sbjct: 160 CRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATG 219

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C    A + G  +H  A K+ +  + FVG ++++ YAK G++  A ++F  +   + 
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN ++ GYA  G     L +  SM+   +  +++T    L+GC+   +   G+ IH L
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           II+   E +  I   L+DMY K      A  VF+ +   D++ W+ L     +     ++
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LFH   L  + PN  T   LL       +L  G  +       GF  +  V+++L+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESGVEVNGCT 450
           + + G V     +++++  +++ +WN  LSG   +C   D  L  F ++ E G   N  T
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGL-HDCGMYDRPLTIFYHMLEEGFIPNMYT 518

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++ +C    +     Q+H  IIK       ++C++LI  Y     L+++    N   
Sbjct: 519 FISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS 578

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ +W  +++         +A+  F  + + G KP+E+ L   L+ C+++ + +  + 
Sbjct: 579 VRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ 638

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  V K G  ++++V SA++D YAKCG ++ A   F ++    D I +NT+I  YA +G
Sbjct: 639 LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALF-EALIRRDTIAWNTIICGYAQNG 697

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
             ++A+  F  M    + P   TF  ++SACSH+GLV++G   F SM   +G+ P+ D  
Sbjct: 698 QGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHC 757

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R G  ++ +  I+ M    +  ++ ++L   ++H N  LGE A+ KL  L P
Sbjct: 758 ACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQP 817

Query: 751 KNDAAHVLLS 760
           + +++++LLS
Sbjct: 818 EEESSYILLS 827



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 289/630 (45%), Gaps = 5/630 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H    KLG   D+F+ + L+ +Y+KCG      ++F  M E+N V+W ++++   
Sbjct: 231 LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+    LK++  M       NEF + +V+K C +    + G  IH   +K   E N F
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +GC +++ Y+K G    A  VF +I   D+  W+A+I      G   E++ +   M    
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              ++YT  + L   +   +   G+ IH  + +   E  +++ NAL+ MY+K+  +    
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K++E M D+D+ISWN    G  +     +  ++F+  +  G  PN  TF  +L  C  L 
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D+  G Q+    +     D   V ++LI M+ +C  +E A   F+ +S +++ TW  +++
Sbjct: 531 DVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIIT 590

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y         L  F  + + GV+ N  T    +  C    + +   Q+H  + K+G  S
Sbjct: 591 NYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS 650

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ S+L+  Y   G ++ +        R D  +W  ++      G  ++A+T F  ++
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           + G  PD      IL++C+  G  +  K   +      G +  V   + ++D   + G  
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMS 659
                   +   S + +++ T++ A   H  +    +  +  KL  LQP  +++++ + +
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAAN--KLFELQPEEESSYILLSN 828

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             + +G  D      +S+ S  G++  P C
Sbjct: 829 IFATEGRWDD-VKRVRSLMSSKGVKKEPGC 857


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 203/730 (27%), Positives = 367/730 (50%), Gaps = 5/730 (0%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQ C  S  +K   + +  L    + +S  +   +HG IVK     D  L  +L+ +Y+K
Sbjct: 102 NQVCWSS--KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAK 159

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C Y  +   V  +M +R++VSWT ++   +  G  +  + ++ +M+  G MPNEF + + 
Sbjct: 160 CRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATG 219

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C    A + G  +H  A K+ +  + FVG ++++ YAK G++  A ++F  +   + 
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN ++ GYA  G     L +  SM+   +  +++T    L+GC+   +   G+ IH L
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           II+   E +  I   L+DMY K      A  VF+ +   D++ W+ L     +     ++
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LFH   L  + PN  T   LL       +L  G  +       GF  +  V+++L+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESGVEVNGCT 450
           + + G V     +++++  +++ +WN  LSG   +C   D  L  F ++ E G   N  T
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGL-HDCGMYDRPLTIFYHMLEEGFIPNMYT 518

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++ +C    +     Q+H  IIK       ++C++LI  Y     L+++    N   
Sbjct: 519 FISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLS 578

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ +W  +++         +A+  F  + + G KP+E+ L   L+ C+++ + +  + 
Sbjct: 579 VRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQ 638

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  V K G  ++++V SA++D YAKCG ++ A   F ++    D I +NT+I  YA +G
Sbjct: 639 LHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALF-EALIRRDTIAWNTIICGYAQNG 697

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
             ++A+  F  M    + P   TF  ++SACSH+GLV++G   F SM   +G+ P+ D  
Sbjct: 698 QGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHC 757

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R G  ++ +  I+ M    +  ++ ++L   ++H N  LGE A+ KL  L P
Sbjct: 758 ACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQP 817

Query: 751 KNDAAHVLLS 760
           + +++++LLS
Sbjct: 818 EEESSYILLS 827



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 153/630 (24%), Positives = 289/630 (45%), Gaps = 5/630 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H    KLG   D+F+ + L+ +Y+KCG      ++F  M E+N V+W ++++   
Sbjct: 231 LGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+    LK++  M       NEF + +V+K C +    + G  IH   +K   E N F
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +GC +++ Y+K G    A  VF +I   D+  W+A+I      G   E++ +   M    
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              ++YT  + L   +   +   G+ IH  + +   E  +++ NAL+ MY+K+  +    
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K++E M D+D+ISWN    G  +     +  ++F+  +  G  PN  TF  +L  C  L 
Sbjct: 471 KLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLF 530

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D+  G Q+    +     D   V ++LI M+ +C  +E A   F+ +S +++ TW  +++
Sbjct: 531 DVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIIT 590

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y         L  F  + + GV+ N  T    +  C    + +   Q+H  + K+G  S
Sbjct: 591 NYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVS 650

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ S+L+  Y   G ++ +        R D  +W  ++      G  ++A+T F  ++
Sbjct: 651 DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMML 710

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           + G  PD      IL++C+  G  +  K   +      G +  V   + ++D   + G  
Sbjct: 711 DEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKF 770

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMS 659
                   +   S + +++ T++ A   H  +    +  +  KL  LQP  +++++ + +
Sbjct: 771 DELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAAN--KLFELQPEEESSYILLSN 828

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             + +G  D      +S+ S  G++  P C
Sbjct: 829 IFATEGRWDD-VKRVRSLMSSKGVKKEPGC 857


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/575 (31%), Positives = 300/575 (52%), Gaps = 1/575 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ ++K G +  A RVF  I       ++ M+ GYA       AL  +  M ++ +   
Sbjct: 87  LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            Y F   L+ C   AD   G++IHG +I +    ++  +  +++MY K   +D A+K+F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM ++D++SWNT+  GFS+N    +   L  +    G RP+ +T   +L     +  L +
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A+  GF    N++++L  M+ +CG+VE A  +FD +  K + +WN ++ GY  
Sbjct: 267 GKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQ 326

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N      +  F  + E G++  G T    +  C    + +    +H  + +    S   +
Sbjct: 327 NGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISV 386

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SLI  Y    ++D + +  N        SW AM+      G   EA+  F  +   G 
Sbjct: 387 MNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGM 446

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KPD + + +++ + A +   +  K IH  +I+   +  ++V +A++D Y+KCG I  AR 
Sbjct: 447 KPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARK 506

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD   +   VI +N +I  Y  HGL   A+++FDKMK   ++P+  T++SV+SACSH G
Sbjct: 507 LFDM-ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSG 565

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LVD+G   FKSM   YG++PS D YG +VD+L R G +++A   IE MP  P  TVY + 
Sbjct: 566 LVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAX 625

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              C+IH N E+GE A++KL  L P     HVLL+
Sbjct: 626 XGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLA 660



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 195/399 (48%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG ++   F  ++F    ++ MY+KC       ++FD M ER+LVSW  I++   Q
Sbjct: 166 GKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQ 225

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     L++ + M+  G  P+   + +V+     +G    G SIH +A++    K   +
Sbjct: 226 NGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNI 285

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++ + Y+K G V  A  +F  +    V  WN+M+ GY   G   +A+ V   ML EGI
Sbjct: 286 STALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T + AL  C+ + D + G+ +H  + +  +   IS++N+LI MY K   +D A  
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASD 405

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  +  +  +SWN +  G+++N    +  + F +    G +P+  T   ++    +L  
Sbjct: 406 IFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSV 465

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
                 +  L +         VT++L+ M+ +CGA+ MA  +FD +S +++ TWN ++ G
Sbjct: 466 TRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDG 525

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           Y  +      L  F  + +  VE N  T+  V+  C  S
Sbjct: 526 YGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHS 564



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/629 (23%), Positives = 276/629 (43%), Gaps = 9/629 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   ++K G  N+   Q  L++++SK G      RVF+ + ++    +  ++    +N 
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  L     M+ +   P  +    ++KVC      + G  IH   +      N F   
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            V+N YAK   +  A ++F  +   D+  WN +I G++  G+  +AL +V  M  EG   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T +  L   + V    +G+ IHG  IR+     ++I  AL DMY K   ++ A  +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M  K V+SWN++  G+ +N  P +  ++F K +  G  P  VT    L  C  L DL+
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +           + +V +SLI M+ +C  V++A  +F+N++ +   +WN ++ GY 
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYA 426

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N   ++ L  F  +   G++ +  T   V+         +    IHG II++      +
Sbjct: 427 QNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIF 486

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G +  + +  +      + +W AM+      G    A+ +F  + +  
Sbjct: 487 VTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGA 546

Query: 545 EKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
            +P++    +++++C+  G      +         G    +    A++D   + G IK A
Sbjct: 547 VEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEA 606

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM--KLANLQPSQATF-VSVMSA 660
               +    S  + VY     A   H    + +E+ +K   KL  L P +  + V + + 
Sbjct: 607 WDFIENMPISPGITVYGAXXGACKIH----KNIEVGEKAAKKLFELNPDEGGYHVLLANI 662

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +      K   + K+M+ + G++ +P C
Sbjct: 663 YASTSKWSKVAEVRKTMEKK-GLKKTPGC 690



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 1/373 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D   R D I L   L  + ++   ++G  +HG+ ++ GF   + +   L  MYSKCG   
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +FD M ++ +VSW  ++   +QNGE +  + ++  M   G  P    +   +  C 
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G  E G  +H F  ++ +  +  V  S+++ Y+K   V  A  +F +++      WNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GYA  G   EALN  S M   G+  D +T ++ +   + ++     + IHGLIIRS 
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           ++ +I +  AL+DMY K   +  A K+F+ ++D+ VI+WN +  G+  +        LF 
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFD 540

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRC 395
           K       PN +T+  ++  C     +D GL+  + +    G     +   +++ +  R 
Sbjct: 541 KMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRA 600

Query: 396 GAVEMAHSVFDNV 408
           G ++ A    +N+
Sbjct: 601 GRIKEAWDFIENM 613



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 226/478 (47%), Gaps = 25/478 (5%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QI  L+I++ +         L+ ++ K   ++ A +VFE + DK    ++T+  G+++N 
Sbjct: 67  QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +     +   +      +P    F+ LL+ CG   DL  G ++    +   F       +
Sbjct: 127 SLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMT 186

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            ++ M+ +C  ++ A+ +FD +  +++ +WN +++G+  N      L+    + + G   
Sbjct: 187 GVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 447 NGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           +  T   V+          MVG+ IHG  I+ GF+    I ++L   Y   G ++ +   
Sbjct: 247 DSITLVTVLPAAA-DVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLI 305

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +G ++  + SW +MM   V  G   +A+ +F  ++E G  P    +   L++CA +G  
Sbjct: 306 FDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL 365

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +R K +H FV +L   +++ V +++I  Y+KC  +  A   F+ + N    + +N +I+ 
Sbjct: 366 ERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFN-NLNGRTHVSWNAMILG 424

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH----------KGLVDKGCLLFK 675
           YA +G VSEA+  F +MK   ++P   T VSV+ A +            GL+ + CL   
Sbjct: 425 YAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL--- 481

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
             D    +  +      LVDM S+ G +  A+ + +++  +   T + +++ G   HG
Sbjct: 482 --DKNIFVTTA------LVDMYSKCGAIHMARKLFDMISDRHVIT-WNAMIDGYGTHG 530



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 178/368 (48%), Gaps = 8/368 (2%)

Query: 335 FHKFILSGSRPNHV---TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           FH        P+HV     ++LL  C  + +L    Q+  L +  G  +E    + L+ +
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           F + G++  A  VF+ +  K    ++ +L GY  N      L   C +    V+     F
Sbjct: 91  FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
            Y+++ C  + + +   +IHG +I   F++  +  + ++  Y    Q+D++++  +    
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ SW  +++     G   +A+ +   + + G++PD   L T+L + A +G     KSI
Sbjct: 211 RDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H + I+ GF   V +++A+ D Y+KCG ++ AR+ FD   +   V+ +N+++  Y  +G 
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFD-GMDQKTVVSWNSMMDGYVQNGE 329

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             +A+ +F+KM    + P+  T +  + AC+  G +++G  + K +D Q  +        
Sbjct: 330 PEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD-QLNLGSDISVMN 388

Query: 692 CLVDMLSR 699
            L+ M S+
Sbjct: 389 SLISMYSK 396


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 203/702 (28%), Positives = 347/702 (49%), Gaps = 8/702 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG + K G  +D+++   ++ +Y   G      +VF+EM +RN+VSWT ++     
Sbjct: 179 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 238

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE +  + +Y  M+  G   NE ++  V+  C  +     G  I    +K  +E    V
Sbjct: 239 KGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAV 298

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ +  +G+V  A  +F  IS  D   WN+++  YA  G+  E+  + + M     
Sbjct: 299 ENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHD 358

Query: 243 TMDKYTFINALQGCSLVADFD---IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            ++  T    L   S++ D D    GR IHGL+++   +  + + N L+ MY  +   + 
Sbjct: 359 EVNSTTVSTLL---SVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEE 415

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF++M  KD+ISWN+L   F  +        +    I +G   N+VTF+  L  C  
Sbjct: 416 ADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFS 475

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
               D G  L  L +  G  D + + ++L+ M+ + G +  +  V   +  +++  WN L
Sbjct: 476 PEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNAL 535

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
           + GY  N      L  F  +   GV  N  T   V+  C    +    G+ +H  I+  G
Sbjct: 536 IGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAG 595

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  ++ +SLI  Y   G L +S +  NG +   + +W A+++A  H GH  E + +  
Sbjct: 596 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVS 655

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G   D++     L++ A +   +  + +H   +KLGF  + ++ +A  D Y+KCG
Sbjct: 656 KMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCG 715

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           +I         S N + +  +N LI A   HG   E  E F +M    ++P   TFVS++
Sbjct: 716 EIGEVVKMLPPSVNRS-LPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLL 774

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           +ACSH GLVD+G   +  +   +G++P+ +   C++D+L R+G L +A+  I  MP +P+
Sbjct: 775 TACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPN 834

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+RSLL+ C+IH + + G  A+E L  L P++D+  VL S
Sbjct: 835 DLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSS 876



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 177/706 (25%), Positives = 331/706 (46%), Gaps = 37/706 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   VK      +   N LI MY+K G       +FD+M  RN VSW  ++S  ++
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVR 136

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-EFGYSIHCFALKIRIEKNPF 181
            G +  G++ +  M   G  P+ F + S++  C   G+    G  +H F  K  +  + +
Sbjct: 137 VGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y   G V+ + +VF  +   +V  W +++ GY+  G   E +++  SM  EG
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ +    +  C L+ D  +GRQI G +I+S +E  +++ N+LI M+     +DYA 
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F +++++D ISWN++   +++N +  +++ +F+         N  T S LL   G + 
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVD 376

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
               G  +  L +  GF     V ++L+ M+   G  E A  VF  +  K++ +WN L++
Sbjct: 377 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMA 436

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  +    D L   C++  +G  VN  TF   +  C   E       +HG ++ +G   
Sbjct: 437 SFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFD 496

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I ++L+  Y   G +  S        R D+ +W A++          +A+  F +L 
Sbjct: 497 NQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLR 556

Query: 542 EAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
             G   +   + ++L++C   G   +R K +H +++  GF ++ +V +++I  YAKCGD+
Sbjct: 557 VEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 616

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             ++  F+   ++  +I +N ++ A AHHG   E +++  KM+   L   Q +F   +SA
Sbjct: 617 SSSQDLFN-GLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSA 675

Query: 661 CSHKGLVDKG---------------CLLFKSMDSQYG-----------MQPSPD----CY 690
            +   ++++G               C +F +    Y            + PS +     +
Sbjct: 676 AAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 735

Query: 691 GCLVDMLSRNGYLE---DAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
             L+  L R+GY E   +  H +  M  +P    + SLL+ C  HG
Sbjct: 736 NILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS-HG 780



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/665 (24%), Positives = 314/665 (47%), Gaps = 45/665 (6%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK   LG Q+ G ++K G  + + ++N+LI+M+   G   +   +F++++ER+ +SW  I
Sbjct: 274 LKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSI 333

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           V+A  QNG  +   +++  M+      N   V +++ V   +   ++G  IH   +K+  
Sbjct: 334 VAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGF 393

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           +    V  ++L  YA  G    A+ VF  + + D+  WN+++  + + G   +AL ++ S
Sbjct: 394 DSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCS 453

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  G +++  TF +AL  C     FD GR +HGL++ S +  +  I NAL+ MY K  G
Sbjct: 454 MIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGG 513

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  + +V  +M  +DV++WN L GG++EN++P +  + F    + G   N++T   +L  
Sbjct: 514 MSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSA 573

Query: 357 C---GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           C   G L  L+ G  L    +  GF  +E+V +SLI M+ +CG +  +  +F+ +  ++I
Sbjct: 574 CLVPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSI 631

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TWN +L+    +    +VLK    +   G+ ++  +F   +    +    +   Q+HG 
Sbjct: 632 ITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 691

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K GF    +I ++    Y   G++    +    +    + SW  ++SAL   G+  E 
Sbjct: 692 AVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 751

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVID 592
              FH ++E G KP      ++L +C+  G   +  + +  + K  G    +     VID
Sbjct: 752 CETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVID 811

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
              + G +                                +EA     KM    ++P+  
Sbjct: 812 LLGRSGRL--------------------------------AEAETFISKMP---MKPNDL 836

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL-VDMLSRNGYLEDAKHVIE 711
            + S++++C     +D+G    K+ ++   ++P  D    L  +M +  G  ED ++V +
Sbjct: 837 VWRSLLASCKIHRDLDRG---RKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRK 893

Query: 712 IMPFQ 716
            M F+
Sbjct: 894 QMGFK 898



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 219/461 (47%), Gaps = 3/461 (0%)

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           G S +     GR +H L ++  V  S+   N LI+MY K   +  A  +F++M  ++ +S
Sbjct: 67  GFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVS 126

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLA 373
           WNT+  G        +    F K    G +P+    + L+  CG+   +   G+Q+    
Sbjct: 127 WNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 186

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G L +  V++++++++   G V  +  VF+ +  +N+ +W  L+ GY       +V+
Sbjct: 187 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             + ++   GVE N  +   V+ +C   +++ +  QI G +IK+G  S   + +SLI  +
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
            N G +D +    N     D  SW ++++A    GH  E+  IF+ +    ++ +   + 
Sbjct: 307 GNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVS 366

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           T+L+    +   +  + IH  V+K+GF++ V V + ++  YA  G  + A + F Q   +
Sbjct: 367 TLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQ-MPT 425

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D+I +N+L+ ++ + G   +A+ I   M       +  TF S ++AC      DKG +L
Sbjct: 426 KDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRIL 485

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
              +    G+  +      LV M  + G +  ++ V+  MP
Sbjct: 486 -HGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP 525



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 199/431 (46%), Gaps = 12/431 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS+  ++  +  G  +HG +VK+GF + + + N L+ MY+  G       VF +M  ++L
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SW  ++++ + +G     L +   M   G   N     S +  C S    + G  +H  
Sbjct: 429 ISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGL 488

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +   +  N  +G ++++ Y K+G ++ + RV   +   DV  WNA+IGGYA      +A
Sbjct: 489 VVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKA 548

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALID 289
           L    ++  EG++ +  T ++ L  C +  D  + G+ +H  I+ +  E    + N+LI 
Sbjct: 549 LAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 608

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  +  +F  + ++ +I+WN +    + + +  +   L  K    G   +  +
Sbjct: 609 MYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFS 668

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           FS  L    KL  L+ G QL  LA+  GF  +  + ++   M+ +CG +     +     
Sbjct: 669 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSV 728

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +WN L+S    +    +V +TF  + E G++    TF  ++  C           
Sbjct: 729 NRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACS---------- 778

Query: 470 IHGAIIKTGFS 480
            HG ++  G +
Sbjct: 779 -HGGLVDQGLA 788



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 11/167 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D    ++ LS +  L     G Q+HG  VKLGF  D F+ N    MYSKCG  G  +
Sbjct: 662 LSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVV 721

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---- 155
           ++      R+L SW +++SA  ++G F+   + + +M   G  P      S++  C    
Sbjct: 722 KMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGG 781

Query: 156 -VSMGASEFGYSIHCFALKIRIEKNPFVGC-SVLNFYAKLGDVAAAE 200
            V  G + +      F L+  IE      C  V++   + G +A AE
Sbjct: 782 LVDQGLAYYDMIAKDFGLEPAIEH-----CICVIDLLGRSGRLAEAE 823


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/664 (29%), Positives = 326/664 (49%), Gaps = 44/664 (6%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +RN VSW  +++A  ++G     L+MY  M   G  P  F + SV+  C ++ A + G
Sbjct: 1   MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
              H  A+K+ ++ + FV   +L  Y K G VA A R+F  + S +   + AM+GG A  
Sbjct: 61  RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV--ADFDIGR------QIHGLIIRSE 276
           G   +AL + + M   GI +D     + L  C+     D+++ R       IH L++R  
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                 + N+L+D+Y K   MD A KVFE ++   ++SWN L  G+ +     +   +  
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
               SG  PN VT+S +L  C K  D                                  
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARD---------------------------------- 266

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            V  A ++FD +   ++TTWN LLSGY       + +  F  +    V+ +  T   ++ 
Sbjct: 267 -VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILS 325

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +C R  N ++  Q+H A ++    +  ++ S LI  Y   GQ+  +    N     D+  
Sbjct: 326 SCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVC 385

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M+S L     + EA      + E G  P E    +++N CA + +  + + +H  V+
Sbjct: 386 WNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVL 445

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K G++  VYV  ++ID YAK G++  AR+ F+     N ++ +N +I  YA +G   +A+
Sbjct: 446 KDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKN-LVAWNEMIHGYAQNGFGEKAV 504

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E+F+ M     +P   TF++V++ CSH GLVD+    F SM+S YG+ P  + Y CL+D 
Sbjct: 505 ELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDA 564

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L+R     + + VI  MP++  P ++  LL+ C +H N ELGE++++ L  L PKN + +
Sbjct: 565 LARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPY 624

Query: 757 VLLS 760
           VLLS
Sbjct: 625 VLLS 628



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/577 (23%), Positives = 249/577 (43%), Gaps = 45/577 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G + HG  VK+G     F++N L+ MY+KCG     +R+FD M   N VS+T ++    Q
Sbjct: 60  GRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQ 119

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF--------GYSIHCFALKI 174
            G  D  L+++  M   G   +  AV SV+  C    A ++          SIH   ++ 
Sbjct: 120 GGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRK 179

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               +  VG S+++ YAK   +  A +VF S+SS  +  WN +I GY   G    A+ V+
Sbjct: 180 GFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVL 239

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M   G   ++ T+ N L  C                                   IK+
Sbjct: 240 EFMQESGFEPNEVTYSNMLASC-----------------------------------IKA 264

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A  +F+++    V +WNTL  G+ + +   +T  LF +      +P+  T +++L
Sbjct: 265 RDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVIL 324

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C +L + +LG Q+   ++     ++  V S LI ++ +CG V +A  +F+ ++ +++ 
Sbjct: 325 SSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVV 384

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN ++SG   +    +       + E+G+     ++  ++  C R  +     Q+H  +
Sbjct: 385 CWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQV 444

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K G+    Y+  SLI  Y   G +D++  F N     ++ +W  M+      G   +AV
Sbjct: 445 LKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAV 504

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDA 593
            +F  ++   +KPD      +L  C+  G      +  +      G    V   + +IDA
Sbjct: 505 ELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDA 564

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHH 629
            A+            +    +D I++  L+ A   HH
Sbjct: 565 LARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHH 601



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/434 (21%), Positives = 192/434 (44%), Gaps = 43/434 (9%)

Query: 36  SDSFLRKDPIFLAKSLSLSENL--------KSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
           S + +R DP+ ++  L              ++  L   +H  +V+ GF +D  + N+L+ 
Sbjct: 134 SRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVD 193

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           +Y+K       ++VF+ ++  ++VSW ++++   Q G ++  +++   M+ +GF PNE  
Sbjct: 194 LYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVT 253

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
             +++  C+                                   K  DV +A  +F  I 
Sbjct: 254 YSNMLASCI-----------------------------------KARDVPSARAMFDKIP 278

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
              V  WN ++ GY       E +++   M  + +  D+ T    L  CS + +F++G+Q
Sbjct: 279 KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQ 338

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H   +R  +   + + + LID+Y K   +  A  +F  M ++DV+ WN++  G + +  
Sbjct: 339 VHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSL 398

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +      +   +G  P   +++ ++  C +L  +  G Q+    L  G+     V  S
Sbjct: 399 SEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCS 458

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI M+ + G ++ A   F+ +  KN+  WNE++ GY  N      ++ F  +  +  + +
Sbjct: 459 LIDMYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPD 518

Query: 448 GCTFFYVVETCCRS 461
             TF  V+  C  S
Sbjct: 519 SVTFIAVLTGCSHS 532



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 40  LRKDPIFLAKS-----LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +R++ +F  +S     ++L   L S   G Q+H  ++K G+  ++++  +LI MY+K G 
Sbjct: 409 MRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGN 468

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                  F+ M  +NLV+W  ++    QNG  +  ++++  M T    P+     +V+  
Sbjct: 469 MDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTG 528

Query: 155 CVSMG 159
           C   G
Sbjct: 529 CSHSG 533


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/702 (28%), Positives = 358/702 (50%), Gaps = 13/702 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH +I + G   DI+  N LI MY KC       ++F  M   N+VSWT ++    Q
Sbjct: 37  GRKVHAYIRESGLETDIYAANALINMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQ 96

Query: 123 NGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            G      + ++  M+  G  PN   + +V++ C        G  +H + L+  +  +  
Sbjct: 97  YGHLGRESVLLFRKMELEGIRPNLITMVAVLRACNLTD----GRQVHGYVLEAGMSLDTS 152

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++ Y K GDV  A+ V   +   DV  WN MI GYA  G   E L  +  M  +G
Sbjct: 153 LGNALVDMYCKTGDVDEADLVLREMPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDG 212

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++  K T+   L  CS   D   G+ IH  ++   ++    + + L+ MY K   ++   
Sbjct: 213 LSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVK 272

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +    + +++ I+WNT+ G ++   +  Q    F +  L G + + VTF ++L  C    
Sbjct: 273 RSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPA 332

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G+ L       GF +   V +SL  M+ +CG+++ A  +F+ +  +N  +WN L+S
Sbjct: 333 HLAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLIS 391

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               + C AD  K F  +   G   +  T   +++ C +  N +    IH  ++++GF  
Sbjct: 392 AAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDK 451

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y   G  + +    +     +  SW  +++A V +G N +AV +F  + 
Sbjct: 452 RTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKMD 511

Query: 542 EAGEKPDEYILGTILNSCAAI-GAYQRTKSIHPFVIKLGFNT--EVYVASAVIDAYAKCG 598
            A +K   Y+    L++C+ + G     K IH +++  GF+   +   A+A+++ Y KCG
Sbjct: 512 VARDKV-TYV--AALDACSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCG 568

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ AR  FD+  +  DV+ + +LI+AYA H  + +A+++   M+   ++     F+S++
Sbjct: 569 SLQEARKIFDEMLH-RDVVTWTSLIVAYAQHSEIEQALKLVKIMEQDGVKVDDVVFLSIL 627

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           S C H GL+++GC  F SM   YG+ P  + Y C++D+L R G+L+ A+ +++ +P +  
Sbjct: 628 SGCDHSGLLEEGCKYFVSMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSD 687

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ +LL+ CR+HGN E G+ A+ ++ LL P   AA+V+LS
Sbjct: 688 SKVWMTLLAACRMHGNPERGKRAARRITLLDPSIPAAYVVLS 729



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/588 (27%), Positives = 282/588 (47%), Gaps = 12/588 (2%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L++Y  M+  G  P+     + ++ C   GA + G  +H +  +  +E + +   +++N
Sbjct: 2   ALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALIN 61

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY-GFEALNVVSSMLFEGITMDKY 247
            Y K      A ++F  + S +V  W ++IG +A  G+ G E++ +   M  EGI  +  
Sbjct: 62  MYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNLI 121

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T +  L+ C+L      GRQ+HG ++ + +    S+ NAL+DMY K+  +D A  V   M
Sbjct: 122 TMVAVLRACNLTD----GRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREM 177

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             +DVISWN +  G++++ +  +      +    G  P  VT++ LL  C    DL  G 
Sbjct: 178 PKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGK 237

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +    +  G   +E V S L+ M+ +CG++E        V  +N   WN ++  Y    
Sbjct: 238 SIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYS 297

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                L++F  +   GV+ +  TF  ++ TC    +      +H  I + GF S   + +
Sbjct: 298 DHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFESI-IVHN 356

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL   Y   G LD + +   G    +  SW +++SA +  G   +A   F  +   G +P
Sbjct: 357 SLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGSRP 416

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           DE    ++L++C      +   SIH  V++ GF+    VA+A+I  YAK GD + AR  F
Sbjct: 417 DEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGDHEAARNVF 476

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH-KGL 666
           D     N  + +NT++ AY   GL  +A+E+F KM +A     + T+V+ + ACS   G 
Sbjct: 477 DAMAERN-TVSWNTILAAYVEKGLNRDAVEMFWKMDVAR---DKVTYVAALDACSGLAGG 532

Query: 667 VDKGCLLFKSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +  G L+   M D  +  +        LV+M  + G L++A+ + + M
Sbjct: 533 LAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEM 580



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 237/486 (48%), Gaps = 8/486 (1%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL +   M  EG+  D  TF+  L+ C++    D GR++H  I  S +E  I   NALI
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASLFHKFILSGSRPNH 347
           +MY K    + AF++F RM   +V+SW ++ G F++  + G ++  LF K  L G RPN 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           +T   +LR C    +L  G Q+    L  G   + ++ ++L+ M+C+ G V+ A  V   
Sbjct: 121 ITMVAVLRAC----NLTDGRQVHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLRE 176

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  +++ +WN ++SGY  +    + L+    + + G+     T+  ++  C   E+    
Sbjct: 177 MPKRDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEG 236

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             IH +++  G      + S L+  Y   G L++    S      +  +W  ++ A    
Sbjct: 237 KSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARY 296

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
             + +A+  F  +   G K D      +L +C++     +   +H ++ +LGF + + V 
Sbjct: 297 SDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGFES-IIVH 355

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +++   YAKCG +  AR  F +   S + + +N+LI A   HG  ++A + F +MKL   
Sbjct: 356 NSLTAMYAKCGSLDAARKMF-EGMPSRNSVSWNSLISAAIQHGCYADAHKFFQRMKLEGS 414

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P + T +S++ AC+ +    +G  + + M  + G          L+ M ++ G  E A+
Sbjct: 415 RPDEVTCISMLDACTKQANAKEGSSIHQ-MVVESGFDKRTGVANALIFMYAKLGDHEAAR 473

Query: 708 HVIEIM 713
           +V + M
Sbjct: 474 NVFDAM 479


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 210/682 (30%), Positives = 338/682 (49%), Gaps = 31/682 (4%)

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           R+  SW   + +  ++ +F   +  Y++M  +G  P+ FA  +V+K    +   + G  I
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 168 HCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           H  A+K     +   V  +++N Y K G +    +VF  I+  D   WN+ I        
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVECSISI 283
             +AL    +M  E + +  +T ++    CS   ++    +G+Q+HG  +R   + + + 
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFT- 233

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+ MY K   +D +  +FE   D+D++SWNT+   FS++    +  + F   +L G 
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGV 293

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAH 402
             + VT + +L  C  L  LD+G ++    L    L E + V S+L+ M+C C  VE   
Sbjct: 294 ELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGR 353

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRS 461
            VFD++  + I  WN ++SGY  N  D   L  F  + + +G+  N  T   V+  C   
Sbjct: 354 RVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHC 413

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E       IHG  +K GF    Y+ ++L+  Y   G++D S    +  E  D  SW  M+
Sbjct: 414 EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMI 473

Query: 522 SALVHQGHNHEAVTIFHSLVEAGE-----------------KPDEYILGTILNSCAAIGA 564
           +  V  G    A+ + H +                      KP+   L T+L  CAA+ A
Sbjct: 474 TGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAA 533

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
             + K IH + I+    +++ V SA++D YAKCG +  +R  F++  N N VI +N LIM
Sbjct: 534 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKN-VITWNVLIM 592

Query: 625 AYAHHGLVSEAMEIFDKM-----KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           A   HG   EA+E+F  M     +    +P++ TF++V +ACSH GL+ +G  LF  M  
Sbjct: 593 ACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKH 652

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKELG 738
            +G++P+ D Y C+VD+L R G LE+A  ++  MP +      + SLL  CRIH N ELG
Sbjct: 653 DHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELG 712

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
           E A++ LL L P   + +VLLS
Sbjct: 713 EVAAKNLLHLEPNVASHYVLLS 734



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 165/686 (24%), Positives = 308/686 (44%), Gaps = 47/686 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGL 99
           R D       L     L+    G Q+H   VK G+ ++ + + N L+ MY KCG  G   
Sbjct: 89  RPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVC 148

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD + +R+ VSW   ++A  +  +++  L+ +  M+      + F + SV   C ++G
Sbjct: 149 KVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLG 208

Query: 160 AS---EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                  G  +H ++L++  +K  F   +++  YAKLG V  ++ +F S    D+  WN 
Sbjct: 209 VMHGLRLGKQLHGYSLRVGDQKT-FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNT 267

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI  ++      EAL     M+ EG+ +D  T  + L  CS +   D+G++IH  ++R+ 
Sbjct: 268 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 327

Query: 277 VECSISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
                S V +AL+DMY     ++   +VF+ +  + +  WN +  G++ N    +   LF
Sbjct: 328 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 387

Query: 336 HKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
            + I ++G  PN  T + ++  C           +   A+  GF ++  V ++L+ M+ R
Sbjct: 388 IEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSR 447

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE------------- 441
            G ++++ ++FD++  ++  +WN +++GY  +   ++ L     +               
Sbjct: 448 MGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDND 507

Query: 442 ----SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
                  + N  T   V+  C          +IH   I+   +S   + S+L+  Y   G
Sbjct: 508 DEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCG 567

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGE----KPDEYIL 552
            L+ S    N     ++ +W  ++ A    G   EA+ +F ++V EAG     KP+E   
Sbjct: 568 CLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTF 627

Query: 553 GTILNSCAAIG-------AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA-R 604
            T+  +C+  G        + R K  H      G        + V+D   + G ++ A  
Sbjct: 628 ITVFAACSHSGLISEGLNLFYRMKHDH------GVEPTSDHYACVVDLLGRAGQLEEAYE 681

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSH 663
           +        + V  +++L+ A   H  V E  E+  K  L +L+P+ A+ +V + +  S 
Sbjct: 682 LVNTMPAEFDKVGAWSSLLGACRIHQNV-ELGEVAAK-NLLHLEPNVASHYVLLSNIYSS 739

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDC 689
            GL +K   + K+M  Q G++  P C
Sbjct: 740 AGLWNKAMEVRKNM-RQMGVKKEPGC 764


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 193/612 (31%), Positives = 328/612 (53%), Gaps = 5/612 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++  C S+ + E G  IH   L    + +  +   +L+ Y K G +  A  +F S+   +
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W +MI GY+  G    A+ +   ML  G   D +TF + ++ CS + DF + RQ+H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +++SE    +   NALI MY K S M  A  VF R+  KD+ISW ++  GFS+     +
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 331 TASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
               F + +LS S  +PN   F      C KLL+ D G Q+  L +  G   +     SL
Sbjct: 284 ALCHFRE-MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSL 342

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
             M+ +CG +E A +VF ++   ++  WN +++G+       +    F  +  +G+  N 
Sbjct: 343 CDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSN 507
            T   ++  C          Q+H  I+K GF+    +C+SL+  Y     L+++ + F +
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + D+ SW  +++A + Q    E + +   +  +  KPD   L  +L S   I +Y+ 
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              IH F++K G N ++ V++A+I+ Y KCG ++ AR  FD S  + D+I +++LI+ YA
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFD-SIGNPDIISWSSLIVGYA 581

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   EA E+F  M+   ++P++ TFV +++ACSH G+V++G  L+++M   Y + P+ 
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           +   C+VD+L+R G L+ A+  I+ MPF P   V+++LL+ C++HGN E+G+ A+E +L 
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 748 LLPKNDAAHVLL 759
           + P N AA V+L
Sbjct: 702 IDPSNSAAVVML 713



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 296/601 (49%), Gaps = 5/601 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q CS S L+   +     ++   +L+S   G ++H H++   +  D+ LQN++++MY KC
Sbjct: 89  QKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKC 146

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +FD M  +N+VSWT ++S   + GE D  + +YV M  +G +P+ F  GS++
Sbjct: 147 GSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIV 206

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C  +   +    +H   LK     +     ++++ Y K   +A A  VF  I   D+ 
Sbjct: 207 KSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLI 266

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGL 271
            W +MI G++  GY  EAL     ML + +   +++ F +A   CS + + D GRQIHGL
Sbjct: 267 SWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGL 326

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            I+  +   +    +L DMY K   ++ A  VF  +   D+++WN +  GF+   N  ++
Sbjct: 327 CIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKES 386

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           +S F +   +G  PN VT   LL  C + + L+ G+Q+    +  GF  +  V +SL+ M
Sbjct: 387 SSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSM 446

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           + +C  +  A  VF+++  K +I +WN LL+         +VL+    ++ S ++ +  T
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              V+ +  +  + ++  QIH  I+K+G +    + ++LI  Y   G L+ + +  +   
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIG 566

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW +++      G   EA  +F ++   G KP+E     IL +C+ IG  +    
Sbjct: 567 NPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLK 626

Query: 571 IHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           ++  + +    +      S ++D  A+ G +  A     Q     DV+V+ TL+ A   H
Sbjct: 627 LYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVH 686

Query: 630 G 630
           G
Sbjct: 687 G 687



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 188/404 (46%), Gaps = 7/404 (1%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
            +  LC   +  S S  + +      + S    L     G Q+HG  +K G  +D+F   
Sbjct: 281 ELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGC 340

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--AAIQNGEFDMGLKMYVDMKTNGF 141
           +L  MY+KCG+      VF  + + +LV+W  I++  A++ N +       +  M+  G 
Sbjct: 341 SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSF--FSQMRHTGL 398

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
           +PN+  V S++  C        G  +H + +K+    +  V  S+L+ Y+K  ++  A +
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458

Query: 202 VFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           VF  I +  D+  WN ++          E L +   M    I  D  T  N L     +A
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
            +++G QIH  I++S +   IS+ NALI+MY K   ++ A K+F+ + + D+ISW++L  
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIV 578

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFL 379
           G+++     +   LF      G +PN +TF  +L  C  +  ++ GL+L + +       
Sbjct: 579 GYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS 638

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
             +   S ++ +  R G +++A      + +  ++  W  LL+ 
Sbjct: 639 PTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAA 682


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 193/612 (31%), Positives = 327/612 (53%), Gaps = 5/612 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++  C S+ + E G  IH   L    + +  +   +L+ Y K G +  A  +F S+   +
Sbjct: 104 LINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKN 163

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W +MI GY+  G    A+ +   ML  G   D +TF + ++ CS + DF + RQ+H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +++SE    +   NALI MY K S M  A  VF R+  KD+ISW ++  GFS+     +
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 331 TASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
               F + +LS S  +PN   F      C KLL+ D G Q+  L +  G   +     SL
Sbjct: 284 ALCHFRE-MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSL 342

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
             M+ +CG +E A +VF ++   ++  WN +++G+       +    F  +  +G+  N 
Sbjct: 343 CDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPND 402

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSN 507
            T   ++  C          Q+H  I+K GF+    +C+SL+  Y     L+++ + F +
Sbjct: 403 VTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFED 462

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + D+ SW  +++A + Q    E + +   +  +  KPD   L  +L S   I +Y+ 
Sbjct: 463 IGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEV 522

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              IH F++K G N ++ V++A+I+ Y KCG ++ AR  FD S  + D+I +++LI+ YA
Sbjct: 523 GSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFD-SIGNPDIISWSSLIVGYA 581

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G   EA E+F  M+   ++P++ TFV +++ACSH G+V++G  L+++M   Y + P+ 
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           +   C+VD+L+R G L+ A+  I  MPF P   V+++LL+ C++HGN E+G+ A+E +L 
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 748 LLPKNDAAHVLL 759
           + P N AA V+L
Sbjct: 702 IDPSNSAAVVML 713



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 165/601 (27%), Positives = 296/601 (49%), Gaps = 5/601 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q CS S L+   +     ++   +L+S   G ++H H++   +  D+ LQN++++MY KC
Sbjct: 89  QKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKC 146

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +FD M  +N+VSWT ++S   + GE D  + +YV M  +G +P+ F  GS++
Sbjct: 147 GSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIV 206

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C  +   +    +H   LK     +     ++++ Y K   +A A  VF  I   D+ 
Sbjct: 207 KSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLI 266

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGL 271
            W +MI G++  GY  EAL     ML + +   +++ F +A   CS + + D GRQIHGL
Sbjct: 267 SWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGL 326

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            I+  +   +    +L DMY K   ++ A  VF  +   D+++WN +  GF+   N  ++
Sbjct: 327 CIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKES 386

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           +S F +   +G  PN VT   LL  C + + L+ G+Q+    +  GF  +  V +SL+ M
Sbjct: 387 SSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSM 446

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           + +C  +  A  VF+++  K +I +WN LL+         +VL+    ++ S ++ +  T
Sbjct: 447 YSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVT 506

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              V+ +  +  + ++  QIH  I+K+G +    + ++LI  Y   G L+ + +  +   
Sbjct: 507 LTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIG 566

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW +++      G   EA  +F ++   G KP+E     IL +C+ IG  +    
Sbjct: 567 NPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLK 626

Query: 571 IHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           ++  + +    +      S ++D  A+ G +  A     Q     DV+V+ TL+ A   H
Sbjct: 627 LYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVH 686

Query: 630 G 630
           G
Sbjct: 687 G 687



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 188/404 (46%), Gaps = 7/404 (1%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
            +  LC   +  S S  + +      + S    L     G Q+HG  +K G  +D+F   
Sbjct: 281 ELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGC 340

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--AAIQNGEFDMGLKMYVDMKTNGF 141
           +L  MY+KCG+      VF  + + +LV+W  I++  A++ N +       +  M+  G 
Sbjct: 341 SLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSF--FSQMRHTGL 398

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
           +PN+  V S++  C        G  +H + +K+    +  V  S+L+ Y+K  ++  A +
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458

Query: 202 VFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           VF  I +  D+  WN ++          E L +   M    I  D  T  N L     +A
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
            +++G QIH  I++S +   IS+ NALI+MY K   ++ A K+F+ + + D+ISW++L  
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIV 578

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFL 379
           G+++     +   LF      G +PN +TF  +L  C  +  ++ GL+L + +       
Sbjct: 579 GYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS 638

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
             +   S ++ +  R G +++A      + +  ++  W  LL+ 
Sbjct: 639 PTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAA 682


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 205/706 (29%), Positives = 346/706 (49%), Gaps = 9/706 (1%)

Query: 62  LGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEM---AERNLVSWTLIV 117
           LG QVHG  V  G    D  LQ  L+ MY     F   + VF  +   A    + W  ++
Sbjct: 57  LGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLI 116

Query: 118 SAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
                 G++   L  Y+ M    +  +P+      V+K C ++GA   G  +H  A  + 
Sbjct: 117 RGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLG 176

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           ++ + FVG +++  YA  G +  A +VF  ++  D   WN M+ GY   G    A+ +  
Sbjct: 177 LDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFG 236

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M   G   +  T    L   +  +D   G Q+H L ++  +E  +++ N L+ MY K  
Sbjct: 237 DMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCK 296

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D  +K+F  M   D+++WN +  G  +N    Q   LF     SG RP+ VT   LL 
Sbjct: 297 CLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 356 QCGKLLDLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
               L   + G +L   +  +C  +D   + S+L+ ++ +C AV MA SV+D+    ++ 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDV-FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVV 415

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
             + ++SGY  N    + +K F  + E G+  N      V+  C      ++  ++H   
Sbjct: 416 IGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYA 475

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K  +    Y+ S+L+  Y   G+LD S    +     D  +W +M+S+    G   EA+
Sbjct: 476 LKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEAL 535

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  +   G K     + ++L++CA++ A    K IH  VIK     +++  SA+ID Y
Sbjct: 536 NLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMY 595

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            KCG+++ A   F+     N+V  +N++I +Y  +GLV E++ +   M+    +    TF
Sbjct: 596 GKCGNLEWAHRVFESMPEKNEV-SWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           ++++SAC+H G V +G  LF+ M  +Y + P  + + C+VD+ SR G L+ A  +I  MP
Sbjct: 655 LALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMP 714

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F+P   ++ +LL  CR+H N EL E AS++L  L P N   +VL+S
Sbjct: 715 FKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 237/492 (48%), Gaps = 28/492 (5%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  LS+S        G Q+H   VK G  +++ + N L++MY+KC     G ++F  M 
Sbjct: 250 LACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMP 309

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             +LV+W  ++S  +QNG  D  L ++ DM+ +G  P+   + S++     +     G  
Sbjct: 310 RDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKE 369

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H + ++  +  + F+  ++++ Y K   V  A+ V+ S  + DV   + MI GY   G 
Sbjct: 370 LHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGM 429

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ +   +L +GI  +     + L  C+ +A   +G+++H   +++  E    + +A
Sbjct: 430 SQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESA 489

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY K   +D +  +F +++ KD ++WN++   F++N  P +  +LF +  + G + +
Sbjct: 490 LMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYS 549

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           +VT S +L  C  L  +  G ++  + +      +    S+LI M+ +CG +E AH VF+
Sbjct: 550 NVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFE 609

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-------- 458
           ++  KN  +WN +++ Y       + +    ++ E G + +  TF  +V  C        
Sbjct: 610 SMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQE 669

Query: 459 ------CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAER 511
                 C +E  Q+  ++             + C  ++  Y   G+LD + E   +   +
Sbjct: 670 GLRLFRCMTEEYQIAPRME-----------HFAC--MVDLYSRAGKLDKAMELIVDMPFK 716

Query: 512 LDMASWGAMMSA 523
            D   WGA++ A
Sbjct: 717 PDAGIWGALLHA 728



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 4/391 (1%)

Query: 34  FC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC    S +R D + L   L    +L     G ++HG+IV+     D+FL + L+ +Y K
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFK 395

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        V+D     ++V  + ++S  + NG     +KM+  +   G  PN  A+ SV
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C SM A + G  +H +ALK   E   +V  ++++ YAK G +  +  +F  IS+ D 
Sbjct: 456 LPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDE 515

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN+MI  +A  G   EALN+   M  EG+     T  + L  C+ +     G++IHG+
Sbjct: 516 VTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGV 575

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +I+  +   +   +ALIDMY K   +++A +VFE M +K+ +SWN++   +       ++
Sbjct: 576 VIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
            SL       G + +HVTF  L+  C     +  GL+L +C+             + ++ 
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 391 MFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           ++ R G ++ A  +  ++ +K +   W  LL
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 234/498 (46%), Gaps = 17/498 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVF--- 304
            +  L+GC   +   +G Q+HG  + + +  +  ++   L+ MY+ +     A  VF   
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL---SGSRPNHVTFSILLRQCGKLL 361
            R A    + WN L  G +   +  ++A LF+  +    S   P+  TF  +++ C  L 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGD-YRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + LG  +   A   G   +  V S+LI M+   G +  A  VFD ++ ++   WN ++ 
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY      +  ++ F ++  SG E N  T    +       +     Q+H   +K G  S
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y     LD+ ++      R D+ +W  M+S  V  G   +A+ +F  + 
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           ++G +PD   L ++L +   +  + + K +H ++++   + +V++ SA++D Y KC  ++
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+  +D S  + DV++ +T+I  Y  +G+  EA+++F  +    ++P+     SV+ AC
Sbjct: 401 MAQSVYDSS-KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 662 SHKGLVDKGCLLFK-SMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           +    +  G  L   ++ + Y  +    CY    L+DM ++ G L+ + ++   +  +  
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGR----CYVESALMDMYAKCGRLDLSHYIFSKISAKDE 515

Query: 719 PTVYRSLLSGCRIHGNKE 736
            T + S++S    +G  E
Sbjct: 516 VT-WNSMISSFAQNGEPE 532


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 205/706 (29%), Positives = 346/706 (49%), Gaps = 9/706 (1%)

Query: 62  LGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEM---AERNLVSWTLIV 117
           LG QVHG  V  G    D  LQ  L+ MY     F   + VF  +   A    + W  ++
Sbjct: 57  LGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLI 116

Query: 118 SAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
                 G++   L  Y+ M    +  +P+      V+K C ++GA   G  +H  A  + 
Sbjct: 117 RGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLG 176

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           ++ + FVG +++  YA  G +  A +VF  ++  D   WN M+ GY   G    A+ +  
Sbjct: 177 LDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFG 236

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M   G   +  T    L   +  +D   G Q+H L ++  +E  +++ N L+ MY K  
Sbjct: 237 DMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCK 296

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D  +K+F  M   D+++WN +  G  +N    Q   LF     SG RP+ VT   LL 
Sbjct: 297 CLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLP 356

Query: 356 QCGKLLDLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
               L   + G +L   +  +C  +D   + S+L+ ++ +C AV MA SV+D+    ++ 
Sbjct: 357 ALTDLNGFNQGKELHGYIVRNCVHMDV-FLVSALVDIYFKCRAVRMAQSVYDSSKAIDVV 415

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
             + ++SGY  N    + +K F  + E G+  N      V+  C      ++  ++H   
Sbjct: 416 IGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYA 475

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K  +    Y+ S+L+  Y   G+LD S    +     D  +W +M+S+    G   EA+
Sbjct: 476 LKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEAL 535

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  +   G K     + ++L++CA++ A    K IH  VIK     +++  SA+ID Y
Sbjct: 536 NLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMY 595

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            KCG+++ A   F+     N+V  +N++I +Y  +GLV E++ +   M+    +    TF
Sbjct: 596 GKCGNLEWAHRVFESMPEKNEV-SWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTF 654

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           ++++SAC+H G V +G  LF+ M  +Y + P  + + C+VD+ SR G L+ A  +I  MP
Sbjct: 655 LALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMP 714

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F+P   ++ +LL  CR+H N EL E AS++L  L P N   +VL+S
Sbjct: 715 FKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 240/498 (48%), Gaps = 30/498 (6%)

Query: 43  DPIF--LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           +P F  LA  LS+S        G Q+H   VK G  +++ + N L++MY+KC     G +
Sbjct: 244 EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWK 303

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F  M   +LV+W  ++S  +QNG  D  L ++ DM+ +G  P+   + S++     +  
Sbjct: 304 LFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNG 363

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  +H + ++  +  + F+  ++++ Y K   V  A+ V+ S  + DV   + MI G
Sbjct: 364 FNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISG 423

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G   EA+ +   +L +GI  +     + L  C+ +A   +G+++H   +++  E  
Sbjct: 424 YVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGR 483

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + +AL+DMY K   +D +  +F +++ KD ++WN++   F++N  P +  +LF +  +
Sbjct: 484 CYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCM 543

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G + ++VT S +L  C  L  +  G ++  + +      +    S+LI M+ +CG +E 
Sbjct: 544 EGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEW 603

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-- 458
           AH VF+++  KN  +WN +++ Y       + +    ++ E G + +  TF  +V  C  
Sbjct: 604 AHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAH 663

Query: 459 ------------CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF- 505
                       C +E  Q+  ++             + C  ++  Y   G+LD + E  
Sbjct: 664 AGQVQEGLRLFRCMTEEYQIAPRME-----------HFAC--MVDLYSRAGKLDKAMELI 710

Query: 506 SNGAERLDMASWGAMMSA 523
            +   + D   WGA++ A
Sbjct: 711 VDMPFKPDAGIWGALLHA 728



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 4/391 (1%)

Query: 34  FC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC    S +R D + L   L    +L     G ++HG+IV+     D+FL + L+ +Y K
Sbjct: 336 FCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFK 395

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        V+D     ++V  + ++S  + NG     +KM+  +   G  PN  A+ SV
Sbjct: 396 CRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASV 455

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C SM A + G  +H +ALK   E   +V  ++++ YAK G +  +  +F  IS+ D 
Sbjct: 456 LPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDE 515

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN+MI  +A  G   EALN+   M  EG+     T  + L  C+ +     G++IHG+
Sbjct: 516 VTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGV 575

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +I+  +   +   +ALIDMY K   +++A +VFE M +K+ +SWN++   +       ++
Sbjct: 576 VIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKES 635

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
            SL       G + +HVTF  L+  C     +  GL+L +C+             + ++ 
Sbjct: 636 VSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVD 695

Query: 391 MFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           ++ R G ++ A  +  ++ +K +   W  LL
Sbjct: 696 LYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 234/499 (46%), Gaps = 19/499 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVF--- 304
            +  L+GC   +   +G Q+HG  + + +  +  ++   L+ MY+ +     A  VF   
Sbjct: 42  LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSL 101

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL---SGSRPNHVTFSILLRQCGKLL 361
            R A    + WN L  G +   +  ++A LF+  +    S   P+  TF  +++ C  L 
Sbjct: 102 PRGAAACALPWNWLIRGLTMAGD-YRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALG 160

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + LG  +   A   G   +  V S+LI M+   G +  A  VFD ++ ++   WN ++ 
Sbjct: 161 AIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY      +  ++ F ++  SG E N  T    +       +     Q+H   +K G  S
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y     LD+ ++      R D+ +W  M+S  V  G   +A+ +F  + 
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           ++G +PD   L ++L +   +  + + K +H ++++   + +V++ SA++D Y KC  ++
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+  +D S  + DV++ +T+I  Y  +G+  EA+++F  +    ++P+     SV+ AC
Sbjct: 401 MAQSVYDSS-KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPD--CY--GCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +    +  G  L       Y ++ + +  CY    L+DM ++ G L+ + ++   +  + 
Sbjct: 460 ASMAAMKLGQELH-----SYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514

Query: 718 SPTVYRSLLSGCRIHGNKE 736
             T + S++S    +G  E
Sbjct: 515 EVT-WNSMISSFAQNGEPE 532


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 309/576 (53%), Gaps = 1/576 (0%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  ++  G++  A + F S+ +  V  WNA+I GYA  G+  EA  +   M+ E +  
Sbjct: 101 TLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEP 160

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
              TF+  L  CS  A   +G++ H  +I+        I  AL+ MY+K   MD A +VF
Sbjct: 161 SIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVF 220

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +  +DV ++N + GG++++ +  +   LF++    G +PN ++F  +L  C     L 
Sbjct: 221 DGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALA 280

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +    ++ G +D+  V ++LI M+  CG++E A  VFD +  +++ +W  ++ GY 
Sbjct: 281 WGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYA 340

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    D    F  + E G++ +  T+ +++  C  S +  +  +IH  +++ GF +   
Sbjct: 341 ENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLL 400

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G + ++ +  +   R D+ SW AM+ A V  G   EA   FH +    
Sbjct: 401 VDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNN 460

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD      +LN+C  +GA      I+   IK    + + V +A+I+   K G I+ AR
Sbjct: 461 VEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERAR 520

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F ++    DV+ +N +I  Y+ HG   EA+++FD+M     +P+  TFV V+SACS  
Sbjct: 521 YIF-ENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRA 579

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           G V++G   F  +    G+ P+ + YGC+VD+L R G L++A+ +I  MP +P+ +++ +
Sbjct: 580 GFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWST 639

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL+ CRI+GN ++ E A+E+ L+  P + A +V LS
Sbjct: 640 LLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLS 675



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 152/655 (23%), Positives = 307/655 (46%), Gaps = 7/655 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+   LG QV  HI++ G   +I+  N LI ++S CG      + FD +  + +V+W  I
Sbjct: 74  LRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAI 133

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++   Q G       ++  M      P+      V+  C S    + G   H   +K+  
Sbjct: 134 IAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF 193

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  +G ++++ Y K G +  A +VF  +   DV  +N MIGGYA  G G +A  +   
Sbjct: 194 VSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYR 253

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG   ++ +F++ L GCS       G+ +H   + + +   + +  ALI MY+    
Sbjct: 254 MQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGS 313

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A +VF++M  +DV+SW  +  G++EN N      LF      G +P+ +T+  ++  
Sbjct: 314 IEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINA 373

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C    DL L  ++    +  GF  +  V ++L++M+ +CGA++ A  VFD +S +++ +W
Sbjct: 374 CASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSW 433

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + ++  Y  N C  +  +TF  +  + VE +  T+  ++  C       +  +I+   IK
Sbjct: 434 SAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK 493

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
               S   + ++LI   V  G ++ + + F N  +R D+ +W  M+      G+  EA+ 
Sbjct: 494 ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQR-DVVTWNVMIGGYSLHGNAREALD 552

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAY 594
           +F  +++   +P+      +L++C+  G  +  +    +++   G    + +   ++D  
Sbjct: 553 LFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLL 612

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQAT 653
            + G++  A +  ++     +  +++TL+ A   +G +  A    ++  ++  +P   A 
Sbjct: 613 GRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMS--EPYDGAV 670

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           +V +    +  G+ +    + K M+S+ G++    C    V+       +ED  H
Sbjct: 671 YVQLSHMYAAAGMWENVAKVRKVMESR-GVRKEQGCTWIEVEGKLHTFVVEDRSH 724



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 250/491 (50%), Gaps = 3/491 (0%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  T++   Q C ++ D  +G+Q+   II+S  + +I  +N LI ++     M  A + 
Sbjct: 59  IDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQT 118

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ + +K V++WN +  G+++  +  +  +LF + +     P+ +TF I+L  C     L
Sbjct: 119 FDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGL 178

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG +     +  GF+ +  + ++L+ M+ + G+++ A  VFD +  ++++T+N ++ GY
Sbjct: 179 KLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGY 238

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +       + F  + + G + N  +F  +++ C   E       +H   + TG     
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDV 298

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++LI+ Y+  G ++ +    +  +  D+ SW  M+       +  +A  +F ++ E 
Sbjct: 299 RVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEE 358

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PD      I+N+CA+       + IH  V++ GF T++ V +A++  YAKCG IK A
Sbjct: 359 GIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDA 418

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD + +  DV+ ++ +I AY  +G   EA E F  MK  N++P   T++++++AC H
Sbjct: 419 RQVFD-AMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGH 477

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G +D G  ++        +   P     L++M  ++G +E A+++ E M  Q     + 
Sbjct: 478 LGALDLGMEIYTQAIKADLVSHIP-VGNALINMNVKHGSIERARYIFENM-VQRDVVTWN 535

Query: 724 SLLSGCRIHGN 734
            ++ G  +HGN
Sbjct: 536 VMIGGYSLHGN 546



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 8/179 (4%)

Query: 29  CGNNQFCSDSFLRK-----DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           CG   F +   +++     D +     L+   +L +  LG +++   +K    + I + N
Sbjct: 445 CGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGN 504

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            LI M  K G       +F+ M +R++V+W +++     +G     L ++  M    F P
Sbjct: 505 ALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRP 564

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAE 200
           N      V+  C   G  E G     + L  R  +      GC V +   + G++  AE
Sbjct: 565 NSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMV-DLLGRAGELDEAE 622


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 212/756 (28%), Positives = 378/756 (50%), Gaps = 64/756 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV---- 117
           LG Q H H++  GF    F+ N L+ +Y+    F     VFD M  R++VSW  ++    
Sbjct: 24  LGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSWNKMINGYA 83

Query: 118 ---------------------------SAAIQNGEFDMGLKMYVDMKTNG--FMPNEFAV 148
                                      S  +QNGE    ++++VDM   G  F    FA+
Sbjct: 84  KSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAI 143

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             ++KVC  +  +  G  IH   +++  + +     ++L+ YAK      + RVF  I  
Sbjct: 144 --ILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 201

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +   W+A+I G         AL     M      + +  + + L+ C+ +++  +G Q+
Sbjct: 202 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 261

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H   ++S+      +  A +DMY K   M  A  +F++  + +  S+N +  G+S+ ++ 
Sbjct: 262 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHG 321

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   LFH+ + SG   + ++ S + R C  +  L  GLQ+  LA+      +  V ++ 
Sbjct: 322 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAA 381

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +C A+  A  VFD +  ++  +WN +++ +  N    + L  F ++  S +E + 
Sbjct: 382 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 441

Query: 449 CTFFYVVETCCRSENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS--- 502
            TF  V++ C        +G   +IH +I+K+G +S   +  SLI  Y   G ++ +   
Sbjct: 442 FTFGSVLKACTGGS----LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 497

Query: 503 ----FEFSNGA---ERLDM----------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
               F+ +N +   E L+            SW +++S  V +  + +A  +F  ++E G 
Sbjct: 498 HSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 557

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            PD++   T+L++CA + +    K IH  VIK    ++VY++S ++D Y+KCGD+  +R+
Sbjct: 558 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRL 617

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F++S    D + +N +I  YAHHG   EA+++F++M L N++P+  TF+S++ AC+H G
Sbjct: 618 MFEKSLR-RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMG 676

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           L+DKG   F  M   YG+ P    Y  +VD+L ++G ++ A  +I  MPF+    ++R+L
Sbjct: 677 LIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL 736

Query: 726 LSGCRIHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
           L  C IH N  E+ E A+  LL L P++ +A+ LLS
Sbjct: 737 LGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 772



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 181/658 (27%), Positives = 306/658 (46%), Gaps = 31/658 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+   LG Q+HG +V++G   D+   + L+ MY+K   F   LRVF  + E+N VSW+ I
Sbjct: 151 LEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 210

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  +QN    + LK + +M+      ++    SV++ C ++     G  +H  ALK   
Sbjct: 211 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 270

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  + L+ YAK  ++  A+ +F    + +   +NAMI GY+   +GF+AL +   
Sbjct: 271 AADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHR 330

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ++  G+  D+ +     + C+LV     G QI+ L I+S +   + + NA IDMY K   
Sbjct: 331 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  AF+VF+ M  +D +SWN +     +N    +T  LF   + S   P+  TF  +L+ 
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKA 450

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA---HSVF---DNVS- 409
           C     L  G+++    +  G     +V  SLI M+ +CG +E A   HS F    NVS 
Sbjct: 451 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSG 509

Query: 410 -------------YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
                         +   +WN ++SGY       D    F  + E G+  +  T+  V++
Sbjct: 510 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 569

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           TC    +  +  QIH  +IK    S  YI S+L+  Y   G L +S      + R D  +
Sbjct: 570 TCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 629

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W AM+    H G   EA+ +F  ++    KP+     +IL +CA +G     K +  F +
Sbjct: 630 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID--KGLEYFYM 687

Query: 577 ---KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
                G + ++   S ++D   K G +K A  +  +  F ++DVI    L +   H   V
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 747

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             A E      L  L P  ++  +++S   +  G+ +K   L ++M   + ++  P C
Sbjct: 748 EVAEEA--TAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG-FKLKKEPGC 802



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 155/646 (23%), Positives = 268/646 (41%), Gaps = 59/646 (9%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C   GA E G   H   +        FV   +L  Y    D  +A  VF  +   DV  W
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 215 NAMIGGYAHC-------------------------------GYGFEALNVVSSMLFEGIT 243
           N MI GYA                                 G   +++ V   M   G  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  TF   L+ CS + D  +G QIHG+++R   +  +   +AL+DMY K      + +V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ + +K+ +SW+ +  G  +N         F +     +  +   ++ +LR C  L +L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG QL   AL   F  +  V ++ + M+ +C  ++ A  +FD     N  ++N +++GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                    L  F  +  SG+  +  +   V   C   +      QI+   IK+  S   
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++ I  Y     L  +F   +   R D  SW A+++A    G  +E + +F S++ +
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +PDE+  G++L +C   G+      IH  ++K G  +   V  ++ID Y+KCG I+ A
Sbjct: 436 RIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 604 RMAFDQSFNSNDV-------------------IVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
                + F   +V                   + +N++I  Y       +A  +F +M  
Sbjct: 495 EKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY-GMQPSPDCY--GCLVDMLSRNG 701
             + P + T+ +V+  C++  L   G  L K + +Q    +   D Y    LVDM S+ G
Sbjct: 555 MGITPDKFTYATVLDTCAN--LASAG--LGKQIHAQVIKKELQSDVYISSTLVDMYSKCG 610

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
            L D++ + E    +     + +++ G   HG  E      E+++L
Sbjct: 611 DLHDSRLMFE-KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 655



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/495 (24%), Positives = 230/495 (46%), Gaps = 34/495 (6%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           ++  +N    C+     ++G+Q H  +I S    +  ++N L+ +Y  S     A  VF+
Sbjct: 6   RFLRMNRAVECAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFD 65

Query: 306 RMADKDVISWNTLFGGFSENKN----------------------------PGQTASLFHK 337
           RM  +DV+SWN +  G++++ N                             G+T      
Sbjct: 66  RMPLRDVVSWNKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEV 125

Query: 338 FI---LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F+    +G+  +  TF+I+L+ C  L D  LG+Q+  + +  G   +    S+L+ M+ +
Sbjct: 126 FVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAK 185

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
                 +  VF  +  KN  +W+ +++G   N   +  LK F  + +    V+   +  V
Sbjct: 186 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 245

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           + +C      ++ GQ+H   +K+ F++ G + ++ +  Y     + ++    + +E L+ 
Sbjct: 246 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNR 305

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            S+ AM++    + H  +A+ +FH L+ +G   DE  L  +  +CA +        I+  
Sbjct: 306 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDL 365

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            IK   + +V VA+A ID Y KC  +  A   FD+     D + +N +I A+  +G   E
Sbjct: 366 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE-MRRRDAVSWNAIIAAHEQNGKGYE 424

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
            + +F  M  + ++P + TF SV+ AC+  G +  G  +  S+  + GM  +      L+
Sbjct: 425 TLFLFVSMLRSRIEPDEFTFGSVLKACT-GGSLGYGMEIHSSI-VKSGMASNSSVGCSLI 482

Query: 695 DMLSRNGYLEDAKHV 709
           DM S+ G +E+A+ +
Sbjct: 483 DMYSKCGMIEEAEKI 497



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A  L    NL S  LG Q+H  ++K    +D+++ + L+ MYSKCG       +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMF 619

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           ++   R+ V+W  ++     +G+ +  ++++  M      PN     S+++ C  MG  +
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 679

Query: 163 FGYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            G   + + +K     +P +    ++++   K G V  A  +   +   +DDV  W  ++
Sbjct: 680 KGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IWRTLL 737

Query: 219 G 219
           G
Sbjct: 738 G 738


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 213/701 (30%), Positives = 351/701 (50%), Gaps = 38/701 (5%)

Query: 106 AERNLVS-WTLIVSAAIQNGE-FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           AE  L S W   + +  Q+   F   +  Y +M T G  P+ FA  +V+K    +     
Sbjct: 44  AEPRLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNL 103

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H    K        V  S++N Y K GD+ AA RVF  I++ D   WN+MI     
Sbjct: 104 GKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACR 163

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-LVADFDIGRQIHGLIIRSEVECSIS 282
                 A+++   ML E +    +T ++    CS L+    +G+Q+H  ++R+  +    
Sbjct: 164 FEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTF 222

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             NAL+ MY K   +  A  +F+   DKD++SWNT+    S+N    +     H  + SG
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMA 401
            RPN VT + +L  C  L  L  G ++    L    L E + V  +L+ M+C C   E  
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCR 460
             VFD +  + I  WN +++GY  N  D + ++ F   ++E G+  N  T   V+  C R
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
            E+      IH  ++K GF    Y+ ++L+  Y   G+++ +        R D+ SW  M
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGE-------------------KPDEYILGTILNSCAA 561
           ++  V  G + +A+ + H + + G+                   KP+   L T+L  CAA
Sbjct: 463 ITGYVVCGRHDDALNLLHDM-QRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + A  + K IH + +K   + +V V SA++D YAKCG +  +R  F+Q  +  +VI +N 
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQ-MSVRNVITWNV 580

Query: 622 LIMAYAHHGLVSEAMEIFDKM-----KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           LIMAY  HG   EA+++F +M         ++P++ T++++ ++ SH G+VD+G  LF +
Sbjct: 581 LIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYT 640

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNK 735
           M +++G++P+ D Y CLVD+L R+G +E+A ++I+ MP        + SLL  C+IH N 
Sbjct: 641 MKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNL 700

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGV 776
           E+GE A++ L +L P     +VL    K+   G  +  +GV
Sbjct: 701 EIGEIAAKNLFVLDP-----NVLDYGTKQSMLGRKMKEKGV 736



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/528 (25%), Positives = 228/528 (43%), Gaps = 27/528 (5%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H H+ K G      + N+L+ MY KCG      RVFDE+  R+ VSW  +++AA 
Sbjct: 103 LGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAAC 162

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNP 180
           +  E+++ + ++  M      P  F + SV   C ++      G  +H F L+   +   
Sbjct: 163 RFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLR-NGDWRT 221

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F   +++  YAKLG V  A+ +F      D+  WN +I   +      EAL  +  ML  
Sbjct: 222 FTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQS 281

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDY 299
           G+  +  T  + L  CS +     G++IH  ++ +      S V  AL+DMY      + 
Sbjct: 282 GVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEK 341

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCG 358
              VF+ M  + +  WN +  G+  N+   +   LF + +   G  PN VT S +L  C 
Sbjct: 342 GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACV 401

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +         +    +  GF  ++ V ++L+ M+ R G +E+A S+F +++ K+I +WN 
Sbjct: 402 RCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT 461

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVE------------------VNGCTFFYVVETCCR 460
           +++GY       D L    ++     E                   N  T   V+  C  
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   +IH   +K   S    + S+L+  Y   G L+ S          ++ +W  +
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGE-----KPDEYILGTILNSCAAIG 563
           + A    G   EA+ +F  +VE G+     +P+E     I  S +  G
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSG 629


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 202/698 (28%), Positives = 356/698 (51%), Gaps = 4/698 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   +K G   D  L   LI++Y+          +FD    ++LVS+  ++SA +Q
Sbjct: 260 GGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQ 319

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G++     ++  M   G  PN   V SV+  C        G S+H   +K  + +   V
Sbjct: 320 HGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISV 379

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y+KLG++ +A+ +F S +  +   WN++I GY        AL+    M  E +
Sbjct: 380 VSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENV 439

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T I  + GC  + D  + + IH   +R+  E + S++NAL+ MY     +  ++K
Sbjct: 440 APDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYK 499

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F++M  + +ISWNT+  G++E ++   +  LF +    G + + VT   L+       D
Sbjct: 500 LFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAED 559

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             +G  L  LA+  G   + ++T++LI M+  CG+VE    +FDN+S +N  ++N L++G
Sbjct: 560 TTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTG 619

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    ++L  F  + ++  E N  T   ++  C   +N Q    +H   I+   +  
Sbjct: 620 YRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVC---QNHQQGKSVHCYAIRNFSTLE 676

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
               +S I  Y  F  +D S +  N     ++  W A++SA V       A   F  +  
Sbjct: 677 TSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHF 736

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KPDE  + +++++CA +G     + +   +++ GF   + V +A+ID +++CG +  
Sbjct: 737 LNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSF 796

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD S    D + ++ +I +Y+ HG    A+ IF  M  + ++P   TFV ++SACS
Sbjct: 797 ARELFDSSV-VKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACS 855

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G V++   LFKS+   +G+ P  + Y C+VD+L R+G+L++A  V+  M F+PS ++ 
Sbjct: 856 HSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLL 915

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            SLL  CR HGN ++GE     L+     N  ++V+LS
Sbjct: 916 ESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLS 953



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/677 (23%), Positives = 330/677 (48%), Gaps = 10/677 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++H  +++ G   ++ +Q  L+ MY+K G+ G    VFD M +++L+SW  ++S   
Sbjct: 158 LGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYS 217

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG     ++   +M+ +G   N   +  +   C + G S+ G S+H FALK  +  +  
Sbjct: 218 LNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDES 277

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ YA L D++++  +F      D+  +N+MI  Y   G   E+ +V   M   G
Sbjct: 278 LAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAG 337

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T I+ L  CS     ++G  +HG++I+  +   IS+V+AL+ MY K   +D A 
Sbjct: 338 LGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAK 397

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+   +K+ + WN++  G+  N         F K  +    P+  T   ++  C  + 
Sbjct: 398 HLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIK 457

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL +   +   A+   F   ++V ++L+ M+  CG +  ++ +F  +  + + +WN ++S
Sbjct: 458 DLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIIS 517

Query: 422 GYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           GY      +A V K F  + + G++ +  T   ++ +   +E+  +   +H   +K+G +
Sbjct: 518 GYAEIRDLEASV-KLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCN 576

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++LI  Y N G ++      +     +  S+  +M+       + E + +F  +
Sbjct: 577 MDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQM 636

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           V+  ++P+     T+LN       +Q+ KS+H + I+     E    ++ I  Y++  ++
Sbjct: 637 VKNEQEPNHI---TVLNLLPVCQNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNV 693

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             +   F+ S    ++IV+N ++ A     L   A + F +M   N++P + T +S++SA
Sbjct: 694 DYSCKLFN-SVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSA 752

Query: 661 CSHKGLVDKG-CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           C+  G  D G C+   ++  Q G   +      L+DM SR G L  A+ + +    + S 
Sbjct: 753 CAQLGNSDLGECV--TALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSV 810

Query: 720 TVYRSLLSGCRIHGNKE 736
           T + ++++   +HG+ E
Sbjct: 811 T-WSAMINSYSMHGDCE 826



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/638 (23%), Positives = 279/638 (43%), Gaps = 35/638 (5%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           F  + F    V+K C ++     G  +HC  L+   E N  V  ++L+ YAK G + A+ 
Sbjct: 136 FGSDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASR 195

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
            VF  +   D+  WNAMI GY+  G   EA+     M  +G+  +  T +     C    
Sbjct: 196 TVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAG 255

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D D G  +H   ++  V    S+  ALI +Y     +  +  +F+    KD++S+N++  
Sbjct: 256 DSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMIS 315

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            + ++    ++  +F +   +G  PN VT   +L  C     ++LG  +  + +  G  +
Sbjct: 316 AYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAE 375

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           + +V S+L+ M+ + G ++ A  +FD+ + KN   WN ++SGY  N      L TFC + 
Sbjct: 376 QISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQ 435

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
              V  +  T   V+  C   ++ +M   IH   ++  F     + ++L+  Y + G+L 
Sbjct: 436 IENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELS 495

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           +S++     E   + SW  ++S          +V +F  + + G + D   L  +++S +
Sbjct: 496 SSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSIS 555

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
                   +S+H   +K G N ++ + + +I  Y+ CG ++  +  FD + +S + + YN
Sbjct: 556 VAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFD-NLSSRNTVSYN 614

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC------------------- 661
            L+  Y  + L  E + +F +M     +P+  T ++++  C                   
Sbjct: 615 VLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNHQQGKSVHCYAIRNFST 674

Query: 662 -------------SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
                        S    VD  C LF S+  +  +  +     C+   L+   +  D   
Sbjct: 675 LETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAF--DFFR 732

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            +  +  +P      SL+S C   GN +LGE  +  +L
Sbjct: 733 QMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALIL 770



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 225/508 (44%), Gaps = 42/508 (8%)

Query: 55  ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
            ++K   +   +H + V+  F  +  + N L+AMY  CG      ++F +M  R L+SW 
Sbjct: 454 RHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWN 513

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFA 171
            I+S   +  + +  +K++  M+  G    +F V +++ +  S+  +E    G S+H  A
Sbjct: 514 TIISGYAEIRDLEASVKLFFQMRQEGL---QFDVVTLIGLISSISVAEDTTVGESLHSLA 570

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +K     +  +  +++  Y+  G V A +R+F ++SS +   +N ++ GY       E L
Sbjct: 571 VKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEIL 630

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +   M+      +  T +N L  C    +   G+ +H   IR+      S   + I MY
Sbjct: 631 PLFRQMVKNEQEPNHITVLNLLPVCQ---NHQQGKSVHCYAIRNFSTLETSFFTSAICMY 687

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            + + +DY+ K+F  + ++++I WN +     + K        F +      +P+ VT  
Sbjct: 688 SRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMM 747

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            L+  C +L + DLG  +  L L  GF     V ++LI M  RCG++  A  +FD+   K
Sbjct: 748 SLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVK 807

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           +  TW+ +++ Y  +      L  F  + +SGV+ +  TF  ++  C  S      G + 
Sbjct: 808 DSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHS------GFVE 861

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
            A              +L KS     Q+D+            M  +  M+  L   GH  
Sbjct: 862 QA-------------RALFKSL----QIDHGIT-------PRMEHYACMVDLLGRSGHLD 897

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSC 559
           EA  +  S+     +P E +L ++L +C
Sbjct: 898 EAYDVVRSM---SFRPSESLLESLLGAC 922



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 190/388 (48%), Gaps = 21/388 (5%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I L  S+S++E+     +G  +H   VK G   DI L N LI MYS CG      R+FD 
Sbjct: 548 IGLISSISVAED---TTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDN 604

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           ++ RN VS+ ++++   +N   +  L ++  M  N   PN   V +++ VC +    + G
Sbjct: 605 LSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQN---HQQG 661

Query: 165 YSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            S+HC+A++    +E + F   S +  Y++  +V  + ++F S+   ++  WNA++    
Sbjct: 662 KSVHCYAIRNFSTLETSFFT--SAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACV 719

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            C     A +    M F  +  D+ T ++ +  C+ + + D+G  +  LI++     ++ 
Sbjct: 720 QCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLL 779

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +VNALIDM+ +   + +A ++F+    KD ++W+ +   +S + +     ++F   I SG
Sbjct: 780 VVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSG 839

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCG 396
            +P+ +TF I+L  C        G   Q  AL      +  +T  + +  C      R G
Sbjct: 840 VKPDDITFVIILSACSH-----SGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSG 894

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYC 424
            ++ A+ V  ++S++   +  E L G C
Sbjct: 895 HLDEAYDVVRSMSFRPSESLLESLLGAC 922



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 60/123 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + +   +S    L +  LG  V   I++ GF   + + N LI M+S+CG   +  
Sbjct: 739 MKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFAR 798

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD    ++ V+W+ ++++   +G+ +  L ++  M  +G  P++     ++  C   G
Sbjct: 799 ELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHSG 858

Query: 160 ASE 162
             E
Sbjct: 859 FVE 861


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 187/625 (29%), Positives = 325/625 (52%), Gaps = 1/625 (0%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   G   NEFA  SV+K C        G  +H   +    + + FV  S++  YAK G 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
              A  +F +I    V  WNA+   Y H     EA+++   M+  GI  ++++  + +  
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+ + D   GR+IHG +I+   +      NAL+DMY K   ++ A  VF+ +A  D++SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N +  G   ++   +   L  +   SG  PN  T S  L+ C  +   +LG QL    + 
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
                +  +   LI M+ +C +++ A  VF  +  +++  WN ++SG+  N  D +    
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +   G+  N  T   V+++    +   M  QIH   +K+GF    Y+ +SLI +Y  
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G ++++      +  +D+  + ++++A    G   EA+ ++  + + G KPD ++  ++
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           LN+CA++ AY++ K +H  ++K GF ++++  +++++ YAKCG I+ A  AF +      
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSR-IPVRG 479

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           ++ ++ +I   A HG   EA+++F +M    + P+  T VSV+ AC+H GLV +    F 
Sbjct: 480 IVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFN 539

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           SM   +G++P  + Y C++D+L R G LE A  ++  MPFQ +  V+ +LL   RIH N 
Sbjct: 540 SMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNI 599

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLS 760
           +LGE A+E LL L P+    HVLL+
Sbjct: 600 DLGEQAAEMLLALEPEKSGTHVLLA 624



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 182/637 (28%), Positives = 318/637 (49%), Gaps = 17/637 (2%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  VLG QVHG +V  GF +D F+ N+L+ +Y+KCG FG    +FD + +R++VSW  + 
Sbjct: 24  KDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRSVVSWNALF 83

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + +      + ++ DM  +G  PNEF++ S++ VC  +  S  G  IH + +K+  +
Sbjct: 84  SCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYD 143

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + F   ++++ YAK+G +  A  VF  I+  D+  WNA+I G     Y   AL ++  M
Sbjct: 144 SDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREM 203

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  + +T  +AL+ C+ +A  ++GRQ+H  +I+ ++     +   LIDMY K + M
Sbjct: 204 NKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSM 263

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A  VF+ M ++D+I+WN +  G S+N+   + ASLF      G   N  T S +L+  
Sbjct: 264 DDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSI 323

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L    +  Q+  L+L  GF  +  V +SLI  + +CG VE A  VF+     ++  + 
Sbjct: 324 AALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFT 383

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            L++ Y  +    + L+ +  + + G++ +      ++  C      +   Q+H  I+K 
Sbjct: 384 SLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKF 443

Query: 478 GFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           GF S  +  +SL+  Y   G + D S  FS    R  + SW AM+  L   G+  EA+ +
Sbjct: 444 GFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQHGYGKEALQL 502

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF-VIKLGFNTEVYVA--SAVIDA 593
           F  +++ G  P+   L ++L +C   G     K  H F  +K+ F  E      + +ID 
Sbjct: 503 FKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK--HYFNSMKILFGIEPMQEHYACMIDL 560

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH---GLVSEAMEIFDKMKLANLQPS 650
             + G ++ A    ++     + +V+  L+ A   H    L  +A E+     L  L+P 
Sbjct: 561 LGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM-----LLALEPE 615

Query: 651 QA-TFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQP 685
           ++ T V + +  +  G+ DK   + + M D +   +P
Sbjct: 616 KSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEP 652



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 211/421 (50%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R +   L+  +++   L+  V G ++HG+++KLG+ +D F  N L+ MY+K G    
Sbjct: 105 SGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILED 164

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VFDE+A+ ++VSW  I++  + +      L++  +M  +G  PN F + S +K C  
Sbjct: 165 ASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAG 224

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           M   E G  +H   +K+ +  + F+G  +++ Y+K   +  A  VF  +   D+  WNA+
Sbjct: 225 MALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAV 284

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G++      EA ++   M  EGI  ++ T    L+  + +    + RQIH L ++S  
Sbjct: 285 ISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGF 344

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E    +VN+LID Y K   ++ A +VFE     D++ + +L   ++++    +   L+ +
Sbjct: 345 EFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLE 404

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +P+    S LL  C  L   + G Q+    L  GF+ +    +SL+ M+ +CG+
Sbjct: 405 MQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGS 464

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E A   F  +  + I +W+ ++ G   +    + L+ F  + + GV  N  T   V+  
Sbjct: 465 IEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCA 524

Query: 458 C 458
           C
Sbjct: 525 C 525



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 2/186 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  ++ D    +  L+   +L +   G QVH HI+K GF +DIF  N+L+ MY+KCG   
Sbjct: 407 DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIE 466

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
                F  +  R +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C 
Sbjct: 467 DASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACN 526

Query: 157 SMG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
             G  +E  +  +   +   IE        +++   + G + AA  +   +    +   W
Sbjct: 527 HAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVW 586

Query: 215 NAMIGG 220
            A++G 
Sbjct: 587 GALLGA 592


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/731 (28%), Positives = 359/731 (49%), Gaps = 15/731 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR + I     L    +L+    G  VH   +  G    + ++N+LI+MY KC       
Sbjct: 208 LRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEA 267

Query: 100 R-VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           R VF  ++  +++SW+  ++A  Q+ E    +K +  M   G  PN   + SV++ C ++
Sbjct: 268 REVFLRISRPSVISWSAFIAAYGQHWE---AIKTFELMNLEGVKPNATTLTSVLRACATV 324

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           GA E G  IH   L     +N  V  +  + YAK   VA A RVF SI   D   WNA++
Sbjct: 325 GAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIV 384

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA---------DFDIGRQIH 269
             YA  G   +A+ +   M  EG   D  TFI  L  CS  A             GRQ+H
Sbjct: 385 SAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVH 444

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             +I + ++    + N L+ MY +   +D A   F+ +  ++V SW  L     +N    
Sbjct: 445 SQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEAS 504

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   L     L G+  N +TF  LL  C    DL LG  +       G   +   +++L+
Sbjct: 505 EGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALL 564

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+  C +++ A  VF+ + ++++ +W  ++S Y       + L+ +  + +     +  
Sbjct: 565 NMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAV 624

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+E C           IH  I+ +G  +  ++ ++++  Y     ++++ +  +  
Sbjct: 625 TLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRI 684

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+  W AM+ A        +A  ++  +VE    P++  L T+L+SC++    +R  
Sbjct: 685 LDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGS 744

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKC-GDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           S+H      G+ +   V +A+I+ YAKC G+++ A+ AF +S  S +V+ +++++ AYA 
Sbjct: 745 SLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAF-ESVASKNVVSWSSIVAAYAR 803

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           +G    A  +F  M    + P+  TF SV+ ACSH GL D+G   F SM   + ++P+P+
Sbjct: 804 NGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPE 863

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            YGC+V++L+++G ++ A   +  MP QP  + +RSLL  C +H +KE G  A+++LL  
Sbjct: 864 HYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDA 923

Query: 749 LPKNDAAHVLL 759
            P+N AA+VLL
Sbjct: 924 EPRNSAAYVLL 934



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 172/680 (25%), Positives = 314/680 (46%), Gaps = 17/680 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L  ++S    L   + G Q+H  I+  G    + L N+L+ MY KCG        F
Sbjct: 9   DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M ER+L+SW  +++   Q+      +++Y   +  G  P+E    S++  C + G  +
Sbjct: 69  DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           FG  +H   L      +  V   +++ Y+  G +  A  VF      DV  W  +I  Y 
Sbjct: 129 FGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYT 188

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G    A    S M  EG+  ++ TF+  L  CS +   + G+ +H L + S ++ S+ 
Sbjct: 189 RHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLR 248

Query: 283 IVNALIDMYIK-SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           + N+LI MY K S   D A +VF R++   VISW+     + ++    +T  L +   L 
Sbjct: 249 MENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMN---LE 305

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G +PN  T + +LR C  +   + G ++  L L   +     V ++   ++ +C  V  A
Sbjct: 306 GVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADA 365

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VF ++  K+  +WN ++S Y       D +     +   G   +  TF  ++ +C +S
Sbjct: 366 SRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQS 425

Query: 462 ENQQMVG---------QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
              +  G         Q+H  +I  G     Y+ + L++ Y   G LD++     G  + 
Sbjct: 426 ALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR 485

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           ++ SW  ++S LV  G   E + +  S+   G + ++    ++L +C+  G     K+IH
Sbjct: 486 NVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIH 545

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             +   G  +++  ++A+++ Y  C  +  AR+ F++     DV+ +  +I AYAH G  
Sbjct: 546 ERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMV-FRDVVSWTIIISAYAHAGYP 604

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
            EA++++ +M+    +P   T +SV+ AC S + LV+   +  + + S  G++       
Sbjct: 605 LEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVAS--GVETDVFVGT 662

Query: 692 CLVDMLSRNGYLEDAKHVIE 711
            +V    +   +EDA+ V +
Sbjct: 663 AVVSFYGKCEAVEDARQVFD 682



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/480 (27%), Positives = 233/480 (48%), Gaps = 13/480 (2%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG+  D+ T +NA+  C+ + D   G+QIH  I+ S +  S+ + N+L+ MY K   
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A   F+RM ++D+ISWN +   +++++   Q   L+    L G++P+ VTF+ LL  
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C    DL  G  L    L   F+ ++ V + LI M+  CG+++ A +VF+     ++ TW
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTW 180

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++ Y  +        T+  + + G+  N  TF  V++TC   E  +    +H   + 
Sbjct: 181 TTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALG 240

Query: 477 TGFSSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +G      + +SLI  Y    +  D + E      R  + SW A ++A    G + EA+ 
Sbjct: 241 SGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIK 297

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F  +   G KP+   L ++L +CA +GA+++ + IH  V+   +     V +A    YA
Sbjct: 298 TFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYA 357

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC  +  A   F  S    D + +N ++ AYA  GL  +A+ +  +M++    P   TF+
Sbjct: 358 KCSRVADASRVF-SSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFI 416

Query: 656 SVMSACSHKGLV-----DKGCLLFKSMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +++ +CS   L+      K     + + SQ    G+         LV M  R G L+DA+
Sbjct: 417 TILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDAR 476



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 149/591 (25%), Positives = 262/591 (44%), Gaps = 15/591 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   G   +E  + + +  C ++G S  G  IH   L   +  +  +  S++  Y K G 
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           V  A   F  +   D+  WNAMI  YA    G +A+ + +    EG   D+ TF + L  
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C    D   GR +H   + +       + N LI MY     +D A  VFE     DV +W
Sbjct: 121 CFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTW 180

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            T+   ++ +       + + K    G R N +TF  +L  C  L  L+ G  +  LAL 
Sbjct: 181 TTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALG 240

Query: 376 CGFLDEENVTSSLIYMFCRCGA-VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
            G      + +SLI M+ +C    + A  VF  +S  ++ +W+  ++ Y  +    + +K
Sbjct: 241 SGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIK 297

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
           TF  +   GV+ N  T   V+  C      +   +IH  ++   ++    + ++    Y 
Sbjct: 298 TFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYA 357

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
              ++ ++    +     D  SW A++SA   QG   +A+ +   +   G  PD+    T
Sbjct: 358 KCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFIT 417

Query: 555 ILNSC---AAIGAYQRTKS------IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           IL SC   A +  Y  +KS      +H  +I  G + + Y+ + ++  Y +CG +  AR 
Sbjct: 418 ILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARA 477

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
           AF Q  +  +V  +  LI     +G  SE +E+   M L   + ++ TF+S++ ACS  G
Sbjct: 478 AF-QGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTG 536

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            +  G  + + + ++ G++        L++M +    L++A+ V E M F+
Sbjct: 537 DLSLGKTIHERIRTK-GLESDIITSNALLNMYTTCESLDEARLVFERMVFR 586



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 7/326 (2%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F R D + L   L    +L++ V G  +H  IV  G   D+F+   +++ Y KC      
Sbjct: 618 FSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDA 677

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VFD + ++++V W  ++ A  QN   +    +Y++M  N   PN+  + +++  C S 
Sbjct: 678 RQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSST 737

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAM 217
              E G S+H  A       +  V  +++N YAK  G++ AA+  F S++S +V  W+++
Sbjct: 738 CKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSI 797

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE- 276
           +  YA  G    A N+  +M  +G+  +  TF + L  CS     D G   + L ++ + 
Sbjct: 798 VAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWS-YFLSMQGDH 856

Query: 277 -VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASL 334
            +E +      ++++  KS  +  A      M    D  +W +L G   E     +  +L
Sbjct: 857 HLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGA-CEVHTDKEYGAL 915

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKL 360
             K +L     N   + +LL    KL
Sbjct: 916 AAKQLLDAEPRNSAAY-VLLYNISKL 940


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 189/626 (30%), Positives = 321/626 (51%), Gaps = 5/626 (0%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   NEFA+  V+K CV    ++ G  +H  A+      + FV  +++  Y   G 
Sbjct: 1   MRAEGVCCNEFALPVVLK-CVP--DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 196 VAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +  A RVF    S+ +   WN ++  Y       +A+ V   M++ GI   ++ F   + 
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
            C+   + D GRQ+H +++R   E  +   NAL+DMY+K   +D A  +FE+M D DV+S
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVS 177

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN L  G   N +  +   L  +   SG  PN    S +L+ C      DLG Q+    +
Sbjct: 178 WNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
                 ++ +   L+ M+ +   ++ A  VFD +S++++  WN L+SG        +   
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFS 297

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  + + G+ VN  T   V+++    E      Q+H    K GF    ++ + LI SY 
Sbjct: 298 IFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYW 357

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
               L ++          D+ +  +M++AL    H   A+ +F  ++  G +PD ++L +
Sbjct: 358 KCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 417

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +LN+CA++ AY++ K +H  +IK  F ++ +  +A++  YAKCG I+ A +AF  S    
Sbjct: 418 LLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF-SSLPER 476

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            V+ ++ +I   A HG    A+E+F +M    + P+  T  SV+ AC+H GLVD+    F
Sbjct: 477 GVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYF 536

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            SM   +G+  + + Y C++D+L R G L+DA  ++  MPFQ + +V+ +LL   R+H +
Sbjct: 537 NSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKD 596

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLS 760
            ELG+ A+EKL +L P+    HVLL+
Sbjct: 597 PELGKLAAEKLFILEPEKSGTHVLLA 622



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 248/512 (48%), Gaps = 7/512 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM-AERNLVSWTLIVSAA 120
           LG QVH   +  GF +D+F+ N L+AMY   G+     RVFDE  +ERN VSW  ++SA 
Sbjct: 25  LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 84

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++N +    ++++ +M  +G  P EF    V+  C      + G  +H   +++  EK+ 
Sbjct: 85  VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 144

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F   ++++ Y K+G V  A  +F  +   DV  WNA+I G    G+   A+ ++  M   
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS 204

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  + +   + L+ C+    FD+GRQIHG +I++  +    I   L+DMY K+  +D A
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDA 264

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF+ M+ +D+I WN L  G S      +  S+F+     G   N  T + +L+    L
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
                  Q+  LA   GF+ + +V + LI  + +C  +  A  VF+  S  +I     ++
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384

Query: 421 SGYCFNCCD--ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +    + CD     +K F  +   G+E +      ++  C      +   Q+H  +IK  
Sbjct: 385 TA--LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQ 442

Query: 479 FSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           F S  +  ++L+ +Y   G + D    FS+  ER  + SW AM+  L   GH   A+ +F
Sbjct: 443 FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQHGHGKRALELF 501

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
             +V+ G  P+   + ++L +C   G     K
Sbjct: 502 GRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 243/516 (47%), Gaps = 5/516 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH  +V++G+  D+F  N L+ MY K G       +F++M + ++VSW  ++S  + 
Sbjct: 128 GRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVL 187

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     +++ + MK++G +PN F + S++K C   GA + G  IH F +K   + + ++
Sbjct: 188 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 247

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G  +++ YAK   +  A +VF  +S  D+  WNA+I G +H G   EA ++   +  EG+
Sbjct: 248 GVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGL 307

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +++ T    L+  + +      RQ+H L  +        +VN LID Y K S +  A +
Sbjct: 308 GVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIR 367

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE  +  D+I+  ++    S+  +      LF + +  G  P+    S LL  C  L  
Sbjct: 368 VFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSA 427

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G Q+    +   F+ +    ++L+Y + +CG++E A   F ++  + + +W+ ++ G
Sbjct: 428 YEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGG 487

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSS 481
              +      L+ F  + + G+  N  T   V+  C  +       +   ++ +  G   
Sbjct: 488 LAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDR 547

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIFHS 539
                S +I      G+LD++ E  N    + + + WGA++ A  VH+      +     
Sbjct: 548 TEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKL 607

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
            +   EK   ++L  + N+ A+ G +     +   +
Sbjct: 608 FILEPEKSGTHVL--LANTYASSGMWNEVAKVRKLM 641



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 14/290 (4%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  L  + +L++     QVH    K+GF  D  + N LI  Y KC      +RVF+E +
Sbjct: 314 LAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECS 373

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             ++++ T +++A  Q    +  +K++++M   G  P+ F + S++  C S+ A E G  
Sbjct: 374 SGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQ 433

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   + F G +++  YAK G +  AE  F S+    V  W+AMIGG A  G+
Sbjct: 434 VHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGH 493

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLIIRSEVEC 279
           G  AL +   M+ EGI  +  T  + L  C+   LV +    F+  +++ G I R+E   
Sbjct: 494 GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFG-IDRTEEHY 552

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNP 328
           S      +ID+  ++  +D A ++   M    +   W  L G    +K+P
Sbjct: 553 S-----CMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDP 597



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 58/120 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+  L+   +L +   G QVH H++K  F +D F  N L+  Y+KCG      
Sbjct: 408 LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAE 467

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F  + ER +VSW+ ++    Q+G     L+++  M   G  PN   + SV+  C   G
Sbjct: 468 LAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAG 527


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 200/691 (28%), Positives = 356/691 (51%), Gaps = 8/691 (1%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           + ND  L   LI MY+ CG       VFD M  +NL+ W  +VS   +NG +   +K+++
Sbjct: 75  YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134

Query: 135 DMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           D+ ++  F P+ F   SV+K C  +     G  IH   +K+ +  + FVG +++  Y K 
Sbjct: 135 DLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINA 252
           G V  A +VF  +   ++  WN+MI  ++  G+  ++ +++  ML  EG+  D  T +  
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  C+   + DIG  IHGL ++  +   + + NA++ MY K   ++ A   F +  +K+V
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +SWNT+   FS   +  +  +L  +  + G   + N VT   +L  C   L L    +L 
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374

Query: 371 CLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             +  HC       ++++ I  + +CGA+  A  VF  +  K +++WN L+ G+  N   
Sbjct: 375 GYSFRHC--FQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDP 432

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L     +  SG + +  T   ++  C   ++ Q   +IHG +++ G  +  ++ +SL
Sbjct: 433 RKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSL 492

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y++ G+  ++    +  +  ++ SW AM+S     G  +E++ +F   +  G +  E
Sbjct: 493 LSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHE 552

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             + ++  +C+ + A +  K  H +V+K     + +V  ++ID YAK G IK +R  FD 
Sbjct: 553 IAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFD- 611

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
                +V  +N +I+A+  HG   EA+E++++MK     P + T++ ++ AC H GLV++
Sbjct: 612 GLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEE 671

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G   FK M +   ++P  + Y CL+DML+R G L+DA  ++  MP +    ++ SLL  C
Sbjct: 672 GLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSC 731

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           R  G  E+GE  ++KLL L P     +VLLS
Sbjct: 732 RTFGALEIGEKVAKKLLELEPDKAENYVLLS 762



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 139/553 (25%), Positives = 254/553 (45%), Gaps = 53/553 (9%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +HG  VKLG + ++ + N ++ MYSKCGY       F +   +N+VSW  ++SA  
Sbjct: 266 IGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFS 325

Query: 122 QNGEFDMGLKMYVDMKTNG--FMPNEFAVGSVMKVCVS----MGASEF-GYSI-HCFALK 173
             G+ +    +  +M+  G     NE  + +V+  C+         E  GYS  HCF   
Sbjct: 326 LEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-- 383

Query: 174 IRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
             +E  N F+       YAK G + +AE+VF+ I    V  WNA+IGG+A  G   +AL+
Sbjct: 384 -HVELSNAFILA-----YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALH 437

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           ++  M + G   D +T  + L  C+ +     G++IHG ++R+ +E    +  +L+  YI
Sbjct: 438 LLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYI 497

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
                  A  +F+RM DK+++SWN +  G+S+N  P ++ +LF K +  G + + +    
Sbjct: 498 HCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVS 557

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +   C +L  L LG +     L     ++  V  S+I M+ + G ++ +  VFD +  KN
Sbjct: 558 VFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKN 617

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +WN ++  +  +    + ++ +  + + G   +  T+  ++  C            H 
Sbjct: 618 VASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACG-----------HA 666

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +++ G            K   NF  ++   E            +  ++  L   G   +
Sbjct: 667 GLVEEGL--------KYFKEMQNFNLIEPKLE-----------HYACLIDMLARAGRLDD 707

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVI 591
           A+ + +   E  E+ D  I  ++L SC   GA +  + +   +++L  +  E YV  +  
Sbjct: 708 ALRLVN---EMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLS-- 762

Query: 592 DAYAKCGDIKGAR 604
           + YA  G   G R
Sbjct: 763 NLYAGLGKWDGVR 775



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 194/419 (46%), Gaps = 13/419 (3%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA-LIDMYIKSSGMDYAFKVFERMADKD 311
           LQ C    D + GR++H  +  S    +  ++N  LI MY        +  VF+ M  K+
Sbjct: 50  LQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKN 109

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +I WN L  G++ N   G    +F   +     +P++ TF  +++ CG +LD+ LG  + 
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            + +  G + +  V ++L+ M+ +CGAV+ A  VFD +   N+ +WN ++  +  N    
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229

Query: 431 DVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
           D       +  E G+  +  T   ++  C       +   IHG  +K G S    + +++
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAM 289

Query: 490 IKSYVNFGQLDN---SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE- 545
           +  Y   G L+    SF  +N     ++ SW  M+SA   +G  +EA  +   +   GE 
Sbjct: 290 VYMYSKCGYLNEAQMSFVKNNNK---NVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEE 346

Query: 546 -KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K +E  +  +L +C      +  K +H +  +  F   V +++A I AYAKCG +  A 
Sbjct: 347 MKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAE 405

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             F        V  +N LI  +A +G   +A+ +  +M  +  QP   T  S++ AC+H
Sbjct: 406 KVF-HGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 3/277 (1%)

Query: 46  FLAKSLSLS-ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           F   SL L+  +LKS   G ++HG++++ G   D F+  +L++ Y  CG       +FD 
Sbjct: 452 FTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDR 511

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M ++NLVSW  ++S   QNG     L ++    + G   +E A+ SV   C  + A   G
Sbjct: 512 MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG 571

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
              H + LK    ++ FVGCS+++ YAK G +  + +VF  +   +V  WNA+I  +   
Sbjct: 572 KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISI 283
           G+G EA+ +   M   G   D++T+I  L  C      + G +    +   + +E  +  
Sbjct: 632 GHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEH 691

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF 319
              LIDM  ++  +D A ++   M ++ D   W++L 
Sbjct: 692 YACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 32/297 (10%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            L +  LG + HG+++K   T D F+  ++I MY+K G      +VFD + ++N+ SW  
Sbjct: 564 QLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNA 623

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY----SIHCFA 171
           I+ A   +G     +++Y  MK  G MP+ F    ++  C   G  E G      +  F 
Sbjct: 624 IIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFN 683

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEA 230
           L   IE        +++  A+ G +  A R+   +  + D   W++++      G   E 
Sbjct: 684 L---IEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFG-ALEI 739

Query: 231 LNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLI----IRSEVECSISI 283
              V+  L E +  DK   Y  ++ L     +  +D  R++  ++    ++ +  CS   
Sbjct: 740 GEKVAKKLLE-LEPDKAENYVLLSNLYAG--LGKWDGVRRVRQMMKEIGLQKDAGCS--- 793

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDV---ISWNTLFGGFSENKNPGQTASLFHK 337
                  +I+  G  Y+F V + +  K     + W  L    SE      T+S+ H+
Sbjct: 794 -------WIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHE 843


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 180/614 (29%), Positives = 326/614 (53%), Gaps = 4/614 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S++K C+     + G  IH   + + ++ N  +  S++N Y       +A+ VF +I + 
Sbjct: 8   SLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP 67

Query: 210 -DVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQ 267
            D+  WN ++          E L V   +L F  +  D +T+ + L+ CS +     G+ 
Sbjct: 68  LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKM 127

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H  +I+S     + ++++ + MY K +  + A K+F+ M ++DV SWN +   + ++  
Sbjct: 128 VHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQ 187

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
           P +   LF +  +SG +P+ VT + ++  C +LLDL+ G ++    +  GF  +  V+S+
Sbjct: 188 PEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSA 247

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ +CG +EMA  VF+ +  KN+ +WN +++GY         ++ F  + E G+   
Sbjct: 248 LVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPT 307

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C RS N Q+   IHG II+    +  ++ SSLI  Y   G + ++     
Sbjct: 308 LTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQ 367

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + ++ SW  M+S  V  G   EA+ IF  + +AG KPD     ++L +C+ +   ++
Sbjct: 368 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEK 427

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH F+I+        V  A++D YAKCG +  A   F+Q     D + + ++I AY 
Sbjct: 428 GKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQ-LPERDFVSWTSMIAAYG 486

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG   EA+++F+KM+ ++ +P + TF++++SACSH GLVD+GC  F  M ++YG +P+ 
Sbjct: 487 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAV 546

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           + Y CL+D+L R G L +A  +++  P  +    +  +L S C +H   +LGE     L+
Sbjct: 547 EHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLI 606

Query: 747 LLLPKNDAAHVLLS 760
              P + + +++LS
Sbjct: 607 EKDPDDPSTYIILS 620



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 262/552 (47%), Gaps = 16/552 (2%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L+ D       L     L     G  VH H++K GF  D+ + ++ + MY+KC  F   
Sbjct: 101 YLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDA 160

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +++FDEM ER++ SW  ++S   Q+G+ +  L+++ +MK +GF P+   + +V+  C  +
Sbjct: 161 IKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARL 220

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              E G  IH   ++     + FV  ++++ Y K G +  A+ VF  I   +V  WN+MI
Sbjct: 221 LDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMI 280

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY+  G     + +   M  EGI     T  + L  CS   +  +G+ IHG IIR+ VE
Sbjct: 281 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 340

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             I + ++LID+Y K   +  A  VF+ M   +V+SWN +  G+ +  +  +   +F   
Sbjct: 341 ADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDM 400

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             +G +P+ +TF+ +L  C +L  L+ G ++    +       E V  +L+ M+ +CGAV
Sbjct: 401 RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAV 460

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  +F+ +  ++  +W  +++ Y  +    + LK F  + +S  + +  TF  ++  C
Sbjct: 461 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 520

Query: 459 CRS----ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             +    E      Q+   I + GF       S LI      G+L  ++E        D+
Sbjct: 521 SHAGLVDEGCYYFNQM---IAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTP--DI 575

Query: 515 ASWGAMMSALVHQGHNHEAV----TIFHSLVEAG-EKPDEYILGTILNSCAAIGAYQRTK 569
                ++S L    H H+ +     I   L+E   + P  YI+  + N  A++  +   +
Sbjct: 576 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYII--LSNMYASVKKWDEVR 633

Query: 570 SIHPFVIKLGFN 581
            +   + +LG  
Sbjct: 634 KVRLKIKELGLK 645



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/372 (28%), Positives = 184/372 (49%), Gaps = 3/372 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S  + D + L   +S    L     G ++H  +V+ GF  D F+ + L+ MY KCG    
Sbjct: 201 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 260

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+++  +N+VSW  +++     G+    ++++  M   G  P    + S++  C  
Sbjct: 261 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 320

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
               + G  IH + ++ R+E + FV  S+++ Y K G++ +AE VF ++   +V  WN M
Sbjct: 321 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 380

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY   G   EAL + + M   G+  D  TF + L  CS +A  + G++IH  II S++
Sbjct: 381 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 440

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E +  ++ AL+DMY K   +D A  +F ++ ++D +SW ++   +  +    +   LF K
Sbjct: 441 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEK 500

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRC 395
              S ++P+ VTF  +L  C     +D G     Q +A + GF       S LI +  R 
Sbjct: 501 MQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEY-GFKPAVEHYSCLIDLLGRV 559

Query: 396 GAVEMAHSVFDN 407
           G +  A+ +   
Sbjct: 560 GRLREAYEILQR 571


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 194/703 (27%), Positives = 353/703 (50%), Gaps = 7/703 (0%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-----NLVSWTLIV 117
            G  +H  IV +G  +D ++  +LI MY KCG  G  L+VFD+M+E      ++  W  ++
Sbjct: 460  GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 519

Query: 118  SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
                + G F+ GL  +  M+  G  P+ +++  V+ +C  +     G  IH + ++   E
Sbjct: 520  DGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFE 579

Query: 178  KNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +P++  +++  Y+       A  +F  + +  ++  WN MIGG+   G   ++L + S 
Sbjct: 580  GDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSL 639

Query: 237  MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
               E   +   +F  A   CS     D GRQ+H  +I+   +    +  +L+ MY KS  
Sbjct: 640  AKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGS 699

Query: 297  MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            ++ A KVF+++ DK+V   N +   F  N        L++K     +  +  T S LL  
Sbjct: 700  VEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSG 759

Query: 357  CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            C  +   D G  +    +         + S+L+ M+ +CG+ E A SVF  +  +++  W
Sbjct: 760  CSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAW 819

Query: 417  NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
              +++G+C N    D L  F  + + GV+ +      V+      EN ++   IHG  IK
Sbjct: 820  GSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIK 879

Query: 477  TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             G  S  ++  SL+  Y  FG  +++    +     ++ +W +M+S     G    ++ +
Sbjct: 880  RGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINL 939

Query: 537  FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
               +++ G   D   + T+L + +++ A  + K++H + I+L   +++ V +A+ID Y K
Sbjct: 940  LPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVK 999

Query: 597  CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
            CG +K A++ F+     N ++ +N++I  Y  HG   EA+ +F +MK +   P + TF++
Sbjct: 1000 CGCLKYAQLIFENMPRRN-LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLA 1058

Query: 657  VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            ++++CSH G+V++G  LF+ M  +YG++P  + Y  +VD+L R G L+DA   I  MP  
Sbjct: 1059 LITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPID 1118

Query: 717  PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
               +V+  LL  CR H N ELGE  ++ LL + P   + +V L
Sbjct: 1119 ADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPL 1161



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 161/665 (24%), Positives = 302/665 (45%), Gaps = 8/665 (1%)

Query: 30   GNNQFC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
            G  QFC   +  +R D   L+  L +   L   + G Q+HG+I++  F  D +L+  LI 
Sbjct: 531  GLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIG 590

Query: 88   MYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
            MYS C        +F ++  R N+V+W +++   ++NG ++  L++Y   K         
Sbjct: 591  MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 650

Query: 147  AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            +       C      +FG  +HC  +K+  + +P+V  S+L  YAK G V  A++VF  +
Sbjct: 651  SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 710

Query: 207  SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
               +V   NAMI  +   G  ++AL + + M      +D +T  + L GCS+V  +D GR
Sbjct: 711  LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 770

Query: 267  QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
             +H  +I+  ++ +++I +AL+ MY K    + A  VF  M ++DV++W ++  GF +N+
Sbjct: 771  TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNR 830

Query: 327  NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
                   LF      G + +    + ++     L +++LG  +   A+  G   +  V  
Sbjct: 831  RFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVAC 890

Query: 387  SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            SL+ M+ + G  E A  VF ++  KN+  WN ++S Y +N      +     I + G  +
Sbjct: 891  SLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYL 950

Query: 447  NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
            +  +   V+              +H   I+    S   + ++LI  YV  G L  +    
Sbjct: 951  DSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIF 1010

Query: 507  NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                R ++ +W +M++     G+  EAV +F  +  +   PDE     ++ SC+  G  +
Sbjct: 1011 ENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE 1070

Query: 567  RTKSIHPFV-IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
               ++   + I+ G    +   ++V+D   + G +  A           D  V+  L+ A
Sbjct: 1071 EGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFA 1130

Query: 626  YAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
               H  +     + D   L  ++P++ + +V +++      + D+   L  SM  + G++
Sbjct: 1131 CRAHRNMELGELVAD--NLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGR-GLK 1187

Query: 685  PSPDC 689
             SP C
Sbjct: 1188 KSPGC 1192



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 295/628 (46%), Gaps = 13/628 (2%)

Query: 117  VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            + A +Q G++   L+++     +     +F   S++K C S+     G +IH   + + +
Sbjct: 413  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 177  EKNPFVGCSVLNFYAKLGDVAAAERVFYSI-----SSDDVGCWNAMIGGYAHCGYGFEAL 231
            + +P++  S++N Y K G + +A +VF  +     S+ D+  WN +I GY   G+  E L
Sbjct: 473  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 232  NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
                 M   GI  D Y+    L  C+ ++ +  GRQIHG IIR+  E    +  ALI MY
Sbjct: 533  AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 292  IKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
               S    A+ +F ++ ++ ++++WN + GGF EN    ++  L+        +    +F
Sbjct: 593  SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 351  SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +     C     LD G Q+ C  +   F D+  V +SL+ M+ + G+VE A  VFD V  
Sbjct: 653  TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 411  KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            K +   N ++S +  N    D L  +  +      V+  T   ++  C    +      +
Sbjct: 713  KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772

Query: 471  HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            H  +IK    S   I S+L+  Y   G  +++       +  D+ +WG+M++        
Sbjct: 773  HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRF 832

Query: 531  HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             +A+ +F ++ + G K D  ++ +++++   +   +    IH F IK G  ++V+VA ++
Sbjct: 833  KDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSL 892

Query: 591  IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
            +D Y+K G  + A M F    N N ++ +N++I  Y+ +GL   ++ +  ++        
Sbjct: 893  VDMYSKFGFAESAEMVFSSMPNKN-LVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLD 951

Query: 651  QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKH 708
              +  +V+ A S    + KG  L      Q  +Q   D      L+DM  + G L+ A+ 
Sbjct: 952  SVSITTVLVAVSSVAALLKGKTLHA---YQIRLQIPSDLQVENALIDMYVKCGCLKYAQL 1008

Query: 709  VIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            + E MP + +   + S+++G   HGN E
Sbjct: 1009 IFENMPRR-NLVTWNSMIAGYGSHGNCE 1035


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 207/751 (27%), Positives = 373/751 (49%), Gaps = 54/751 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV---- 117
           LG Q H H++  GF    F+ N L+ +Y+    F     VFD+M  R++VSW  ++    
Sbjct: 24  LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 83

Query: 118 ---------------------------SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
                                      S  +QNGE    ++++VDM   G   +      
Sbjct: 84  KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 143

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++KVC  +  +  G  IH   +++  + +     ++L+ YAK      + RVF  I   +
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
              W+A+I G         AL     M      + +  + + L+ C+ +++  +G Q+H 
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             ++S+      +  A +DMY K   M  A  +F+   + +  S+N +  G+S+ ++  +
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 323

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              LFH+ + SG   + ++ S + R C  +  L  GLQ+  LA+      +  V ++ I 
Sbjct: 324 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 383

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +C A+  A  VFD +  ++  +WN +++ +  N    + L  F ++  S +E +  T
Sbjct: 384 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-------F 503
           F  +++ C        + +IH +I+K+G +S   +  SLI  Y   G ++ +       F
Sbjct: 444 FGSILKACTGGSLGYGM-EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFF 502

Query: 504 EFSNGA---ERLDM----------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
           + +N +   E L+            SW +++S  V +  + +A  +F  ++E G  PD++
Sbjct: 503 QRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKF 562

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              T+L++CA + +    K IH  VIK    ++VY+ S ++D Y+KCGD+  +R+ F++S
Sbjct: 563 TYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS 622

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
               D + +N +I  YAHHG   EA+++F++M L N++P+  TF+S++ AC+H GL+DKG
Sbjct: 623 LR-RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 681

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
              F  M   YG+ P    Y  +VD+L ++G ++ A  +I  MPF+    ++R+LL  C 
Sbjct: 682 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCT 741

Query: 731 IHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
           IH N  E+ E A+  LL L P++ +A+ LLS
Sbjct: 742 IHRNNVEVAEEATAALLRLDPQDSSAYTLLS 772



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 183/658 (27%), Positives = 309/658 (46%), Gaps = 31/658 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+   LG Q+HG +V++G   D+   + L+ MY+K   F   LRVF  + E+N VSW+ I
Sbjct: 151 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 210

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  +QN    + LK + +M+      ++    SV++ C ++     G  +H  ALK   
Sbjct: 211 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 270

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  + L+ YAK  ++  A+ +F +  + +   +NAMI GY+   +GF+AL +   
Sbjct: 271 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 330

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ++  G+  D+ +     + C+LV     G QI+GL I+S +   + + NA IDMY K   
Sbjct: 331 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 390

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  AF+VF+ M  +D +SWN +     +N    +T  LF   + S   P+  TF  +L+ 
Sbjct: 391 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 450

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA---HSVF---DNVS- 409
           C     L  G+++    +  G     +V  SLI M+ +CG +E A   HS F    NVS 
Sbjct: 451 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 509

Query: 410 -------------YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
                         +   +WN ++SGY       D    F  + E G+  +  T+  V++
Sbjct: 510 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 569

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           TC    +  +  QIH  +IK    S  YICS+L+  Y   G L +S      + R D  +
Sbjct: 570 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 629

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W AM+    H G   EA+ +F  ++    KP+     +IL +CA +G     K +  F +
Sbjct: 630 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID--KGLEYFYM 687

Query: 577 ---KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
                G + ++   S ++D   K G +K A  +  +  F ++DVI    L +   H   V
Sbjct: 688 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 747

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             A E      L  L P  ++  +++S   +  G+ +K   L ++M   + ++  P C
Sbjct: 748 EVAEEA--TAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG-FKLKKEPGC 802



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 160/646 (24%), Positives = 273/646 (42%), Gaps = 59/646 (9%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C   GA E G   H   +        FV   +L  Y    D  +A  VF  +   DV  W
Sbjct: 16  CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75

Query: 215 NAMIGGYAHC-------------------------------GYGFEALNVVSSMLFEGIT 243
           N MI GY+                                 G   +++ V   M  EGI 
Sbjct: 76  NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  TF   L+ CS + D  +G QIHG+++R   +  +   +AL+DMY K      + +V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ + +K+ +SW+ +  G  +N         F +     +  +   ++ +LR C  L +L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG QL   AL   F  +  V ++ + M+ +C  ++ A  +FDN    N  ++N +++GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                    L  F  +  SG+  +  +   V   C   +      QI+G  IK+  S   
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++ I  Y     L  +F   +   R D  SW A+++A    G  +E + +F S++ +
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +PDE+  G+IL +C   G+      IH  ++K G  +   V  ++ID Y+KCG I+ A
Sbjct: 436 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 494

Query: 604 RMAFDQSFNSNDV-------------------IVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
                + F   +V                   + +N++I  Y       +A  +F +M  
Sbjct: 495 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 554

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY-GMQPSPDCYGC--LVDMLSRNG 701
             + P + T+ +V+  C++  L   G  L K + +Q    +   D Y C  LVDM S+ G
Sbjct: 555 MGITPDKFTYATVLDTCAN--LASAG--LGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 610

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
            L D++ + E    +     + +++ G   HG  E      E+++L
Sbjct: 611 DLHDSRLMFE-KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 655



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 36/355 (10%)

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R  H+T S+   +C K   L+LG Q     +  GF     V + L+ ++        A  
Sbjct: 6   RLLHMTRSV---ECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 62

Query: 404 VFDNVSYKNITTWNE-------------------------------LLSGYCFNCCDADV 432
           VFD +  +++ +WN+                               +LSGY  N      
Sbjct: 63  VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 122

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ F ++   G+E +G TF  +++ C   E+  +  QIHG +++ G  +     S+L+  
Sbjct: 123 IEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDM 182

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y    +   S     G    +  SW A+++  V       A+  F  + +      + I 
Sbjct: 183 YAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIY 242

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            ++L SCAA+   +    +H   +K  F  +  V +A +D YAKC +++ A++ FD S N
Sbjct: 243 ASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 302

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH-KGL 666
            N    YN +I  Y+      +A+ +F ++  + L   + +   V  AC+  KGL
Sbjct: 303 LNRQ-SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 356



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A  L    NL S  LG Q+H  ++K    +D+++ + L+ MYSKCG       +F
Sbjct: 560 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 619

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           ++   R+ V+W  ++     +G+ +  ++++  M      PN     S+++ C  MG  +
Sbjct: 620 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 679

Query: 163 FGYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            G   + + +K     +P +    ++++   K G V  A  +   +   +DDV  W  ++
Sbjct: 680 KGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IWRTLL 737

Query: 219 G 219
           G
Sbjct: 738 G 738


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 202/710 (28%), Positives = 357/710 (50%), Gaps = 11/710 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS-WT 114
            L S   G  VH H+++ G   + FL N LI MY  CG        F   A    V+ + 
Sbjct: 54  RLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYN 113

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            ++SA  +NG ++  L++Y  M   G  P++     V+  C ++G+      IH   ++ 
Sbjct: 114 QMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEA 173

Query: 175 R--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
              I  N  +  +++N Y K G V  A +VF  I + D   W +MI  YA+ G+  EAL+
Sbjct: 174 PQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALD 233

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   M  +GI  D  TF +AL  C+ + D   G+ IH  I+ S +E    + +ALI+MY 
Sbjct: 234 LYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDF-VGSALINMYA 289

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           +   +  A + FE++ +K V+ W +L   + +  +  +   L+ +    G   + VT+  
Sbjct: 290 RCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVT 349

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK- 411
            L  C  L  L  G  +      CGF     V ++L+ M+ +CG ++ A +VF+ V  K 
Sbjct: 350 ALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAKCGELDAARAVFNRVRQKR 408

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           N+  W  ++S Y       + L+ +  +   G   N  TF  V+  C  S + +   +IH
Sbjct: 409 NVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIH 468

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G +  +  +S   + ++L+  Y   G L+ +      + R D+ SW AM+ A    G   
Sbjct: 469 GHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGR 528

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAV 590
           EA+ ++ ++   G  PDE  + + L++CA  G+ Q  + IH  V+K   F + + V +A+
Sbjct: 529 EALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTAL 588

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ++ Y +CG ++ AR  F+      DV+ +  +  AYA  G   + ++++ +M L  ++P+
Sbjct: 589 VNMYGRCGRLETARSMFE-DMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPN 647

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + TF S++  CSH GL+ +G   F  M S++ + P  + + C+VD+L R+G L DA+ ++
Sbjct: 648 EITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALV 707

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E MP+QP    + ++L  C+ H + +  + A+ ++  L P+N + + LLS
Sbjct: 708 ESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLS 757



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/588 (27%), Positives = 283/588 (48%), Gaps = 21/588 (3%)

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           +D + +G++        +++ C  +G+   G  +H   L+    +N F+G  ++  Y   
Sbjct: 34  LDQRRHGYVE---LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNC 90

Query: 194 GDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
           G++  A   F + +S   V C+N M+  Y   G    AL +   M  EG   DK T+   
Sbjct: 91  GEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIV 150

Query: 253 LQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           L  CS V      R+IH  II +   +  ++S+ NAL++MY K   ++ A KVF+ + ++
Sbjct: 151 LGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNR 210

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D +SW ++   ++ N    +   L+ +    G +P+ +TF+  L  C KL+D        
Sbjct: 211 DAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGK------ 264

Query: 371 CLALHCGF----LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
             A+H       ++ + V S+LI M+ RCG V  A   F+ +  K++  W  L++ Y   
Sbjct: 265 --AIHARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 322

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
           C   + L  +  +   GV  +G T+   +  C      +    IH  + + GF S   + 
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSL-VVH 381

Query: 487 SSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           ++L+  Y   G+LD +   F+   ++ ++  W AM+SA    GH  EA+ ++  +V  G 
Sbjct: 382 TALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT 441

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P+EY    +L +C++ G  +    IH  V      + V V +A++  YAKCG ++ A+ 
Sbjct: 442 RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
           AF+ S    D++ +N +I AYA HGL  EA++++  M    + P + T  S +SAC+  G
Sbjct: 502 AFEAS-GRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISG 560

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            +  G  +   +      + S      LV+M  R G LE A+ + E M
Sbjct: 561 SLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDM 608


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/754 (27%), Positives = 374/754 (49%), Gaps = 60/754 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV---- 117
           LG Q H H++  GF    F+ N L+ +Y+    F     VFD+M  R++VSW  ++    
Sbjct: 66  LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 125

Query: 118 ---------------------------SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
                                      S  +QNGE    ++++VDM   G   +      
Sbjct: 126 KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 185

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++KVC  +  +  G  IH   +++  + +     ++L+ YAK      + RVF  I   +
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
              W+A+I G         AL     M      + +  + + L+ C+ +++  +G Q+H 
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             ++S+      +  A +DMY K   M  A  +F+   + +  S+N +  G+S+ ++  +
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              LFH+ + SG   + ++ S + R C  +  L  GLQ+  LA+      +  V ++ I 
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +C A+  A  VFD +  ++  +WN +++ +  N    + L  F ++  S +E +  T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485

Query: 451 FFYVVETCCRSENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS----- 502
           F  +++ C        +G   +IH +I+K+G +S   +  SLI  Y   G ++ +     
Sbjct: 486 FGSILKACTGGS----LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541

Query: 503 --FEFSNGA---ERLDM----------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
             F+ +N +   E L+            SW +++S  V +  + +A  +F  ++E G  P
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D++   T+L++CA + +    K IH  VIK    ++VY+ S ++D Y+KCGD+  +R+ F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           ++S    D + +N +I  YAHHG   EA+++F++M L N++P+  TF+S++ AC+H GL+
Sbjct: 662 EKSLR-RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           DKG   F  M   YG+ P    Y  +VD+L ++G ++ A  +I  MPF+    ++R+LL 
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780

Query: 728 GCRIHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
            C IH N  E+ E A+  LL L P++ +A+ LLS
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814



 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 183/658 (27%), Positives = 309/658 (46%), Gaps = 31/658 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+   LG Q+HG +V++G   D+   + L+ MY+K   F   LRVF  + E+N VSW+ I
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  +QN    + LK + +M+      ++    SV++ C ++     G  +H  ALK   
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  + L+ YAK  ++  A+ +F +  + +   +NAMI GY+   +GF+AL +   
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ++  G+  D+ +     + C+LV     G QI+GL I+S +   + + NA IDMY K   
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  AF+VF+ M  +D +SWN +     +N    +T  LF   + S   P+  TF  +L+ 
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA---HSVF---DNVS- 409
           C     L  G+++    +  G     +V  SLI M+ +CG +E A   HS F    NVS 
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 551

Query: 410 -------------YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
                         +   +WN ++SGY       D    F  + E G+  +  T+  V++
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           TC    +  +  QIH  +IK    S  YICS+L+  Y   G L +S      + R D  +
Sbjct: 612 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 671

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W AM+    H G   EA+ +F  ++    KP+     +IL +CA +G     K +  F +
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID--KGLEYFYM 729

Query: 577 ---KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
                G + ++   S ++D   K G +K A  +  +  F ++DVI    L +   H   V
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             A E      L  L P  ++  +++S   +  G+ +K   L ++M   + ++  P C
Sbjct: 790 EVAEEA--TAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG-FKLKKEPGC 844



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/650 (24%), Positives = 275/650 (42%), Gaps = 59/650 (9%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V K C   GA E G   H   +        FV   +L  Y    D  +A  VF  +   D
Sbjct: 54  VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113

Query: 211 VGCWNAMIGGYAHC-------------------------------GYGFEALNVVSSMLF 239
           V  WN MI GY+                                 G   +++ V   M  
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EGI  D  TF   L+ CS + D  +G QIHG+++R   +  +   +AL+DMY K      
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           + +VF+ + +K+ +SW+ +  G  +N         F +     +  +   ++ +LR C  
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L +L LG QL   AL   F  +  V ++ + M+ +C  ++ A  +FDN    N  ++N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY         L  F  +  SG+  +  +   V   C   +      QI+G  IK+  
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           S    + ++ I  Y     L  +F   +   R D  SW A+++A    G  +E + +F S
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++ +  +PDE+  G+IL +C   G+      IH  ++K G  +   V  ++ID Y+KCG 
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532

Query: 600 IKGARMAFDQSFNSNDV-------------------IVYNTLIMAYAHHGLVSEAMEIFD 640
           I+ A     + F   +V                   + +N++I  Y       +A  +F 
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY-GMQPSPDCYGC--LVDML 697
           +M    + P + T+ +V+  C++  L   G  L K + +Q    +   D Y C  LVDM 
Sbjct: 593 RMMEMGITPDKFTYATVLDTCAN--LASAG--LGKQIHAQVIKKELQSDVYICSTLVDMY 648

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           S+ G L D++ + E    +     + +++ G   HG  E      E+++L
Sbjct: 649 SKCGDLHDSRLMFE-KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/390 (23%), Positives = 166/390 (42%), Gaps = 36/390 (9%)

Query: 310 KDVISWNT-LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           + V+S+N  L    S  + P  + S F  F+   +  +   FS + ++C K   L+LG Q
Sbjct: 12  RSVVSFNRCLTEKISYRRVP--SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQ 69

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE---------- 418
                +  GF     V + L+ ++        A  VFD +  +++ +WN+          
Sbjct: 70  AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129

Query: 419 ---------------------LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
                                +LSGY  N      ++ F ++   G+E +G TF  +++ 
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C   E+  +  QIHG +++ G  +     S+L+  Y    +   S     G    +  SW
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            A+++  V       A+  F  + +      + I  ++L SCAA+   +    +H   +K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
             F  +  V +A +D YAKC +++ A++ FD S N N    YN +I  Y+      +A+ 
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ-SYNAMITGYSQEEHGFKALL 368

Query: 638 IFDKMKLANLQPSQATFVSVMSACSH-KGL 666
           +F ++  + L   + +   V  AC+  KGL
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGL 398



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A  L    NL S  LG Q+H  ++K    +D+++ + L+ MYSKCG       +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           ++   R+ V+W  ++     +G+ +  ++++  M      PN     S+++ C  MG  +
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721

Query: 163 FGYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            G   + + +K     +P +    ++++   K G V  A  +   +   +DDV  W  ++
Sbjct: 722 KGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IWRTLL 779

Query: 219 G 219
           G
Sbjct: 780 G 780


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 196/641 (30%), Positives = 335/641 (52%), Gaps = 11/641 (1%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           G+++  C S+ + ++G  IH   LK   + +  +   +LN Y K G +  A + F ++  
Sbjct: 161 GNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQL 220

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W  MI GY+  G   +A+ +   ML  G   D  TF + ++ C +  D D+GRQ+
Sbjct: 221 RNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQL 280

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG +I+S  +  +   NALI MY +   + +A  VF  ++ KD+ISW ++  GF++    
Sbjct: 281 HGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYE 340

Query: 329 GQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            +   LF      G  +PN   F  +   C  LL+ + G Q+  +    G         S
Sbjct: 341 IEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCS 400

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L  M+ + G +  A   F  +   ++ +WN +++ +  +    + +  FC +  +G+  +
Sbjct: 401 LCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPD 460

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FS 506
           G TF  ++  C          QIH  IIK G      +C+SL+  Y     L ++F  F 
Sbjct: 461 GITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFK 520

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           + +E  ++ SW A++SA +      E   +F  ++ +  KPD   + TIL +CA + + +
Sbjct: 521 DVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLE 580

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
               +H F +K G   +V V++ +ID YAKCG +K AR  F  + N  D++ +++LI+ Y
Sbjct: 581 VGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNP-DIVSWSSLIVGY 639

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A  GL  EA+ +F  MK   +QP++ T++ V+SACSH GLV++G   + +M+ + G+ P+
Sbjct: 640 AQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPT 699

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            +   C+VD+L+R G L +A++ I+ M F P  T++++LL+ C+ HGN ++ E A+E +L
Sbjct: 700 REHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENIL 759

Query: 747 LLLPKNDAAHVLLSK--------RKRQREGNLLDHEGVCNV 779
            L P N AA VLLS         ++  R  NL+   GV  V
Sbjct: 760 KLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKV 800



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 305/635 (48%), Gaps = 5/635 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +++S   G ++H HI+K     D+ LQN+++ MY KCG      + FD M  RN+VSWT+
Sbjct: 169 SIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTI 228

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S   QNG+ +  + MY+ M  +G+ P+    GS++K C   G  + G  +H   +K  
Sbjct: 229 MISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSG 288

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + +     ++++ Y + G +  A  VF  IS+ D+  W +MI G+   GY  EAL +  
Sbjct: 289 YDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFR 348

Query: 236 SMLFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
            M  +G    +++ F +    C  + + + GRQIHG+  +  +  ++    +L DMY K 
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKF 408

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A + F ++   D++SWN +   FS++ +  +    F + + +G  P+ +TF  LL
Sbjct: 409 GFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLL 468

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NI 413
             CG  + ++ G Q+    +  G   E  V +SL+ M+ +C  +  A +VF +VS   N+
Sbjct: 469 CACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANL 528

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +LS    +    +V + F  +  S  + +  T   ++ TC    + ++  Q+H  
Sbjct: 529 VSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCF 588

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K+G      + + LI  Y   G L ++ +     +  D+ SW +++      G  HEA
Sbjct: 589 SVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEA 648

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH-PFVIKLGFNTEVYVASAVID 592
           + +F  +   G +P+E     +L++C+ IG  +     +    I+LG        S ++D
Sbjct: 649 LNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVD 708

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
             A+ G +  A     +   + D+ ++ TL+ +   HG V  A    +   +  L PS +
Sbjct: 709 LLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAE--NILKLDPSNS 766

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             + ++S         K     +++  Q G+Q  P
Sbjct: 767 AALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVP 801



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/473 (24%), Positives = 220/473 (46%), Gaps = 10/473 (2%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I ++  T+ N +  C+ +     G++IH  I++S  +  + + N +++MY K   +  A 
Sbjct: 153 IQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDAR 212

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F+ M  ++V+SW  +  G+S+N        ++ + + SG  P+ +TF  +++ C    
Sbjct: 213 KAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAG 272

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D+DLG QL    +  G+       ++LI M+ R G +  A  VF  +S K++ +W  +++
Sbjct: 273 DIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMIT 332

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFS 480
           G+     + + L  F +++  G        F  V + CRS  +   G QIHG   K G  
Sbjct: 333 GFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLG 392

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              +   SL   Y  FG L ++       E  D+ SW A+++A    G  +EA+  F  +
Sbjct: 393 RNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQM 452

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +  G  PD     ++L +C +     +   IH ++IK+G + E  V ++++  Y KC ++
Sbjct: 453 MHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNL 512

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             A   F     + +++ +N ++ A   H    E   +F  M  +  +P   T  +++  
Sbjct: 513 HDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGT 572

Query: 661 CSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           C+    ++ G    C   KS     G+         L+DM ++ G L+ A+ V
Sbjct: 573 CAELASLEVGNQVHCFSVKS-----GLVVDVSVSNRLIDMYAKCGSLKHARDV 620



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 3/386 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F + +        S   +L     G Q+HG   K G   ++F   +L  MY+K G+    
Sbjct: 355 FYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSA 414

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +R F ++   +LVSW  I++A   +G+ +  +  +  M   G MP+     S++  C S 
Sbjct: 415 IRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSP 474

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAM 217
                G  IH + +KI ++K   V  S+L  Y K  ++  A  VF  +S + ++  WNA+
Sbjct: 475 VTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAI 534

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +          E   +   MLF     D  T    L  C+ +A  ++G Q+H   ++S +
Sbjct: 535 LSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGL 594

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +S+ N LIDMY K   + +A  VF    + D++SW++L  G+++     +  +LF  
Sbjct: 595 VVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRM 654

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCG 396
               G +PN VT+  +L  C  +  ++ G      + +  G        S ++ +  R G
Sbjct: 655 MKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAG 714

Query: 397 AVEMAHSVFDNVSY-KNITTWNELLS 421
            +  A +    + +  +IT W  LL+
Sbjct: 715 CLYEAENFIKKMGFNPDITMWKTLLA 740



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 106/221 (47%), Gaps = 2/221 (0%)

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           S +++   T+  ++  C    + +   +IH  I+K+       + + ++  Y   G L +
Sbjct: 151 SSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKD 210

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           + +  +  +  ++ SW  M+S     G  ++A+ ++  ++++G  PD    G+I+ +C  
Sbjct: 211 ARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCI 270

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
            G     + +H  VIK G++  +   +A+I  Y + G I  A   F    ++ D+I + +
Sbjct: 271 AGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTM-ISTKDLISWAS 329

Query: 622 LIMAYAHHGLVSEAMEIF-DKMKLANLQPSQATFVSVMSAC 661
           +I  +   G   EA+ +F D  +    QP++  F SV SAC
Sbjct: 330 MITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSAC 370


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 190/625 (30%), Positives = 320/625 (51%), Gaps = 3/625 (0%)

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           K  GF         ++  C  + + E G  IH   LK +   +  +   +LN Y K   +
Sbjct: 55  KKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSL 114

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A++VF ++   +V  W ++I GY+  G G  AL     ML  G+  D++TF + ++ C
Sbjct: 115 KDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKAC 174

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           S + D  +GRQ+H  +++SE    I   NALI MY KS+ +  A  VF RMA +D+ISW 
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWG 234

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           ++  GFS+     +    F + +  G   PN   F  +   C  LL  + G QL  +++ 
Sbjct: 235 SMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G   +     SL  M+ +CG +  A  VF  +   ++  WN +++G+ +     + +  
Sbjct: 295 FGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAF 354

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +   G+  +  T   ++  C          Q+HG I K G      +C++L+  Y  
Sbjct: 355 FSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAK 414

Query: 496 FGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             +L D  F F       D+ SW A+++A +      E   +   +  +  +PD   L  
Sbjct: 415 CSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTN 474

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +L + A   + +    +H + +K G N +  V + +ID YAKCG +K A   FD   N  
Sbjct: 475 VLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINP- 533

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           DV+ +++LI+ YA  G   EA+++F  M+  +++P+  TFV V++ACSH GLV++G  L+
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLY 593

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            +M+ ++G+ P+ +   C+VD+L+R G L +A+  I  M F P   V+++LL+ C+ HGN
Sbjct: 594 GTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGN 653

Query: 735 KELGEWASEKLLLLLPKNDAAHVLL 759
            ++G+ A+E +L + P N AAHVLL
Sbjct: 654 VDVGKRAAENILKIDPSNSAAHVLL 678



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 277/584 (47%), Gaps = 13/584 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+S   G ++H H++K     D+ LQN+++ MY KC       +VFD M ERN+VSWT +
Sbjct: 76  LRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSV 135

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++   QNG+    L+ Y  M  +G MP++F  GS++K C S+G    G  +H   LK   
Sbjct: 136 IAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEF 195

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +     ++++ Y K   +  A  VF  +++ D+  W +MI G++  GY  EAL     
Sbjct: 196 GAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKE 255

Query: 237 MLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           ML +G+ + +++ F +    CS +   + GRQ+HG+ I+  +   +    +L DMY K  
Sbjct: 256 MLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCG 315

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A  VF ++   D+++WN +  GF+   +  +  + F +    G  P+ +T   LL 
Sbjct: 316 LLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLC 375

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNIT 414
            C    +L  G+Q+       G   +  V ++L+ M+ +C  +  A   F+ +    ++ 
Sbjct: 376 ACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLV 435

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN +L+    +    +V +    +  S    +  T   V+     + + ++  Q+H   
Sbjct: 436 SWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYA 495

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +KTG +    + + LI  Y   G L  + +  +     D+ SW +++      G+  EA+
Sbjct: 496 LKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEAL 555

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDA 593
            +F ++     KP+      +L +C+ +G  +    ++  + K  G        S ++D 
Sbjct: 556 KLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDL 615

Query: 594 YAKCGDIKGA-----RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            A+ G +  A     +MAFD      D++V+ TL+ A   HG V
Sbjct: 616 LARAGCLNEAEGFIHQMAFDP-----DIVVWKTLLAACKTHGNV 654


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 195/713 (27%), Positives = 364/713 (51%), Gaps = 7/713 (0%)

Query: 52  SLSENLKSRVLGTQVH---GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S+S  L S    TQ+H     I+ LG  + +     LIA Y+          VF   +  
Sbjct: 18  SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 77

Query: 109 NLVS-WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           N V  W  I+ A   NG F   L +Y + +     P+ +   SV+  C  +   E   SI
Sbjct: 78  NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 137

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   L +    + ++G ++++ Y +  D+  A +VF  +   DV  WN++I GY   GY 
Sbjct: 138 HDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 197

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            EAL +       G+  D YT  + L+ C  +   + G  IHGLI +  ++  + + N L
Sbjct: 198 NEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGL 257

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           + MY K +G+    ++F++M  +D +SWNT+  G+S+     ++  LF + + +  +P+ 
Sbjct: 258 LSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDL 316

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           +T + +L+ CG L DL+ G  +    +  G+  +   ++ LI M+ +CG +  +  VF  
Sbjct: 317 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 376

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  K+  +WN +++ Y  N    + +K F  + ++ V+ +  T+  ++    +  +  + 
Sbjct: 377 MKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLG 435

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            ++H  + K GF+S   + ++L+  Y   G++ +S +     +  D+ +W  ++++ VH 
Sbjct: 436 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 495

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
              +  + +   +   G  PD   + +IL  C+ + A ++ K IH  + KLG  ++V V 
Sbjct: 496 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 555

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +I+ Y+KCG ++ +   F +   + DV+ +  LI A   +G   +A+  F +M+ A +
Sbjct: 556 NVLIEMYSKCGSLRNSFQVF-KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 614

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P    FV+++ ACSH GLV++G   F  M   Y ++P  + Y C+VD+LSR+  L+ A+
Sbjct: 615 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 674

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             I  MP +P  +++ +LLS CR+ G+ E+ E  SE+++ L P +   +VL+S
Sbjct: 675 DFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 727



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 164/332 (49%), Gaps = 19/332 (5%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQF      + D + +   L    +L     G  VH +++  G+  D    N LI MY+K
Sbjct: 310 NQF------KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 363

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       VF  M  ++ VSW  +++  IQNG FD  +K++  MKT+   P+      +
Sbjct: 364 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVML 422

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           + +   +G    G  +HC   K+    N  V  ++++ YAK G++  + +VF ++ + D+
Sbjct: 423 LSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 482

Query: 212 GCWNAMIGGYAH---CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
             WN +I    H   C  G   L ++S M  EG+T D  T ++ L  CSL+A    G++I
Sbjct: 483 ITWNTIIASCVHSEDCNLG---LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEI 539

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF---GGFSEN 325
           HG I +  +E  + + N LI+MY K   +  +F+VF+ M  KDV++W  L    G + E 
Sbjct: 540 HGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEG 599

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           K   +    F +   +G  P+HV F  ++  C
Sbjct: 600 K---KAVRAFGEMEAAGIVPDHVAFVAIIFAC 628



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 2/284 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +     LS+S  L    LG ++H  + K+GF ++I + N L+ MY+KCG  G  L
Sbjct: 412 VKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL 471

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+ M  R++++W  I+++ + + + ++GL+M   M+T G  P+   + S++ VC  + 
Sbjct: 472 KVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 531

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH    K+ +E +  VG  ++  Y+K G +  + +VF  + + DV  W A+I 
Sbjct: 532 AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALIS 591

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVE 278
                G G +A+     M   GI  D   F+  +  CS     + G    H +    ++E
Sbjct: 592 ACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 651

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG 321
             I     ++D+  +S+ +D A      M  K D   W  L   
Sbjct: 652 PRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 695



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 96/188 (51%), Gaps = 8/188 (4%)

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           + +  +I  + A+     +   +H  +I LG +  V  ++ +I  YA   D   +   F 
Sbjct: 13  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
            +  SN+V ++N++I A  H+GL SEA+ ++ + +   LQP   TF SV++AC+  GL+D
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLD 130

Query: 669 KGCLLFKSM-DSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
               + KS+ D    M    D Y    L+DM  R   L+ A+ V E MP +   + + SL
Sbjct: 131 FE--MAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-WNSL 187

Query: 726 LSGCRIHG 733
           +SG   +G
Sbjct: 188 ISGYNANG 195


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 194/697 (27%), Positives = 357/697 (51%), Gaps = 3/697 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH      GF +   + N LI +YSK GY     +VF+ +  +++V+W  ++S   QNG
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + ++ DM  +   P  + + SV+     +   E G  +HC  +K       +V  
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCN 300

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            ++  Y++   + +AER+F +++S D   +N++I G    G+   AL + + M  + +  
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V     G Q+H   I++ +   I +  +L+D+Y K + ++ A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++++ WN +   + +  N   +  +F +  + G  PN  T+  +LR C  L  L 
Sbjct: 421 LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +  GF     V S LI M+ + G + +A  +   +   ++ +W  +++GY 
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +   ++ L+ F  +   G++ +   F   +  C      +   QIH      GF +   
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600

Query: 485 ICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I ++LI  Y   G++  ++  F    ++ ++ SW +++S L   G+  EA+ +F  ++  
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNI-SWNSLVSGLAQSGYFEEALQVFVRMLRT 659

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             + + +  G+ +++ A++   ++ + IH  V+K G+++E  V++++I  YAK G I  A
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDA 719

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F+   +  +VI +N +I  Y+ HG   EA+ +F++MK+  + P+  TFV V+SACSH
Sbjct: 720 WREFN-DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSH 778

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV +G   F+SM   + + P  + Y C+VD+L R G L+ A   I+ MP      ++R
Sbjct: 779 IGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWR 838

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LLS C IH N E+GE A+  LL L P++ A +VL+S
Sbjct: 839 TLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLIS 875



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 310/625 (49%), Gaps = 22/625 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS S  ++   LG Q+H  ++K GF ++ ++ N L+A+YS+        R+F 
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M  R+ VS+  ++S  +Q G  D  L+++  M+ +   P+   V S++  C S+GA   
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  A+K  +  +  +  S+L+ Y+K  DV  A + F +  ++++  WN M+  Y  
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQ 440

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M  EG+  +++T+ + L+ C+ +    +G QIH  +I++  + ++ +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +  A ++  R+ + DV+SW  +  G+ ++    +   LF +    G 
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           + +++ F+  +  C  +  L  G Q+   +   GF  + ++ ++LI ++ RCG ++ A+ 
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ +  KN  +WN L+SG   +    + L+ F  +  +  EVN  T+   +       N
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMS 522
            +   QIH  ++KTG+ S   + +SLI  Y   G + +++ EF++ +ER ++ SW AM++
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER-NVISWNAMIT 739

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFV 575
                G   EA+ +F  +   G  P+      +L++C+ IG        ++    IH  V
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K    +E YV   V+D   + G +  A     +     D +++ TL+ A   H    + 
Sbjct: 800 PK----SEHYV--CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH----KN 849

Query: 636 MEIFDKM--KLANLQPS-QATFVSV 657
           +EI ++    L  L+P   AT+V +
Sbjct: 850 IEIGERAAHHLLELEPEDSATYVLI 874



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 177/672 (26%), Positives = 316/672 (47%), Gaps = 8/672 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI-QN 123
           ++H  I K GF  +  L ++L+  Y + G     ++VFDE + R++ SW  ++   + Q 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNPF 181
             F +   ++  M   G  PN +    V+K CV  G   F Y   +H        + +P 
Sbjct: 139 SNFQV-FCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPL 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   +++ Y+K G + +A++VF  I   D+  W AMI G +  G   EA+ +   M    
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I    Y   + L   + +  F++G Q+H L+I+        + N L+ +Y +S  +  A 
Sbjct: 257 IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAE 316

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F  M  +D +S+N+L  G  +     +   LF K      +P+ +T + LL  C  + 
Sbjct: 317 RIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G+QL   A+  G   +  +  SL+ ++ +C  VE AH  F     +NI  WN +L 
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLV 436

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y      +D  + F  +   G+  N  T+  ++ TC       +  QIH  +IKTGF  
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+CS LI  Y  +GQL  +          D+ SW AM++  V      EA+ +F  + 
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G + D     + +++CA I A ++ + IH      GF  ++ + +A+I  YA+CG I+
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A +AF++  + N+ I +N+L+   A  G   EA+++F +M     + +  T+ S +SA 
Sbjct: 617 EAYLAFEKIGDKNN-ISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +    + +G  +  SM  + G     +    L+ + +++G + DA      M  + +   
Sbjct: 676 ASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVIS 733

Query: 722 YRSLLSGCRIHG 733
           + ++++G   HG
Sbjct: 734 WNAMITGYSQHG 745



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 249/521 (47%), Gaps = 25/521 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D I +A  LS   ++ +   G Q+H H +K G + DI L+ +L+ +YSKC       
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F      N+V W +++ A  Q        +++  M+  G +PN+F   S+++ C S+G
Sbjct: 418 KFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   +K   + N +V   +++ YAK G +A A R+   +  DDV  W AMI 
Sbjct: 478 ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIA 537

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       EAL +   M + GI  D   F +A+  C+ +     G+QIH     +    
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA 597

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +SI NALI +Y +   +  A+  FE++ DK+ ISWN+L  G +++    +   +F + +
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            + +  N  T+   +     L ++  G Q+  + L  G+  E  V++SLI ++ + G++ 
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F+++S +N+ +WN +++GY  + C  + L+ F  +   G+  N  TF  V+  C 
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777

Query: 460 RS-------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-R 511
                    +  + + +IH  + K    S  Y+C  ++      GQLD + E+       
Sbjct: 778 HIGLVKEGLDYFESMFKIHDLVPK----SEHYVC--VVDLLGRAGQLDRAMEYIKEMPIP 831

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
            D   W  ++SA V            H  +E GE+   ++L
Sbjct: 832 ADAMIWRTLLSACV-----------IHKNIEIGERAAHHLL 861



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 276/596 (46%), Gaps = 8/596 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   N      +++ C++ G+      +HC   K   +  P +  S+++ Y + GD
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
              A +VF   S+  V  WN MI  +      F+   +   ML EGIT + YTF   L+ 
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 256 CSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           C +  D  F+  +Q+H        + S  + N LID+Y K+  ++ A KVF  +  KD++
Sbjct: 169 C-VGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +W  +  G S+N    +   LF     S   P     S +L    K+   +LG QL CL 
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  GF  E  V + L+ ++ R   +  A  +F  ++ ++  ++N L+SG          L
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  +    ++ +  T   ++  C          Q+H   IK G S+   +  SL+  Y
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLY 407

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
                ++ + +F    E  ++  W  M+ A     +  ++  IF  +   G  P+++   
Sbjct: 408 SKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYP 467

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +IL +C ++GA    + IH  VIK GF   VYV S +ID YAK G +  A +   +    
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALA-LRILRRLPE 526

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           +DV+ +  +I  Y  H + SEA+++F++M+   +Q     F S +SAC+    + +G  +
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586

Query: 674 F-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             +S  + +G   S +    L+ + +R G +++A    E +  + + + + SL+SG
Sbjct: 587 HAQSYAAGFGADLSIN--NALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 241/485 (49%), Gaps = 3/485 (0%)

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +++ M   G+  +   ++  L+GC          ++H  I +S  +    ++++L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y +      A KVF+  +++ V SWN +   F   K+  Q   LF + +  G  PN  TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 351 SILLRQC-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           + +L+ C G  +  +   Q+     + GF     V + LI ++ + G +E A  VF+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            K+I TW  ++SG   N  + + +  FC++  S +         V+    + +  ++  Q
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H  +IK GF S  Y+C+ L+  Y    +L ++    +     D  S+ +++S LV QG 
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           +  A+ +F  +     KPD   + ++L++CA++GA  +   +H   IK G + ++ +  +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KC D++ A   F  +   N ++++N +++AY     +S++ EIF +M++  + P
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETEN-IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +Q T+ S++  C+  G +  G  +   +  + G Q +      L+DM ++ G L  A  +
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHV-IKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 710 IEIMP 714
           +  +P
Sbjct: 521 LRRLP 525


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 202/731 (27%), Positives = 352/731 (48%), Gaps = 52/731 (7%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           +LA  L    + K+ + G  +H H+++   ++D FL N LI  Y+KC       R+FD+M
Sbjct: 7   YLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQM 66

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK--VCVSMGASEF 163
            +R++ +W  I+ A  +  E +    ++ +M     +     + ++ +   C ++   E 
Sbjct: 67  PKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVEC 126

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G   H  ++KI ++ N +VG ++L  YAK   +  A + F  +   +   + AM+GG A 
Sbjct: 127 GRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLAD 186

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-------------VADFDI-GRQIH 269
                EA  +   ML   I +D  +  + L  CS              V   D+ G+Q+H
Sbjct: 187 SDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH 246

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            L I+   E  + + N+L+DMY K+  MD A  +F  M +  V+SWN +  G+ +     
Sbjct: 247 CLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSS 306

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +      +    G  P+ +T+  +L  C K  D++ G Q                     
Sbjct: 307 KAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ--------------------- 345

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
                         +FD +S  ++++WN +LSGY  N    + +K F  +    V  +  
Sbjct: 346 --------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRT 391

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   ++ +       +   Q+H    K  F +  Y+ S LI  Y   G+++ +    +  
Sbjct: 392 TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRI 451

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
             LD+  W +MM+ L     + EA T F  + E G  P ++   T+L+ CA + +  + +
Sbjct: 452 AELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGR 511

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +H  + + G+  + +V SA+ID Y+KCGD+  AR  FD     N  + +N +I  YA +
Sbjct: 512 QVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN-TVTWNEMIHGYAQN 570

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   EA+ +++ M  +  +P   TFV+V++ACSH GLVD G  +F SM  ++G++P  D 
Sbjct: 571 GCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDH 630

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C++D L R G L +A+ +I+ MP +  P ++  LLS CR++ +  L   A+E+L  L 
Sbjct: 631 YTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLD 690

Query: 750 PKNDAAHVLLS 760
           P+N A +VLL+
Sbjct: 691 PQNSAPYVLLA 701


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 194/697 (27%), Positives = 357/697 (51%), Gaps = 3/697 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH      GF +   + N LI +YSK GY     +VF+ +  +++V+W  ++S   QNG
Sbjct: 181 QVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNG 240

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + ++ DM  +   P  + + SV+     +   E G  +HC  +K       +V  
Sbjct: 241 LEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCN 300

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            ++  Y++   + +AER+F +++S D   +N++I G    G+   AL + + M  + +  
Sbjct: 301 GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ V     G Q+H   I++ +   I +  +L+D+Y K + ++ A K F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++++ WN +   + +  N   +  +F +  + G  PN  T+  +LR C  L  L 
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+    +  GF     V S LI M+ + G + +A  +   +   ++ +W  +++GY 
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +   ++ L+ F  +   G++ +   F   +  C      +   QIH      GF +   
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600

Query: 485 ICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I ++LI  Y   G++  ++  F    ++ ++ SW +++S L   G+  EA+ +F  ++  
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNI-SWNSLVSGLAQSGYFEEALQVFVRMLRT 659

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             + + +  G+ +++ A++   ++ + IH  V+K G+++E  V++++I  YAK G I  A
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDA 719

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F+   +  +VI +N +I  Y+ HG   EA+ +F++MK+  + P+  TFV V+SACSH
Sbjct: 720 WREFN-DMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSH 778

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV +G   F+SM   + + P  + Y C+VD+L R G L+ A   I+ MP      ++R
Sbjct: 779 IGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWR 838

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LLS C IH N E+GE A+  LL L P++ A +VL+S
Sbjct: 839 TLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLIS 875



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 309/625 (49%), Gaps = 22/625 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L+  LS S  ++   LG Q+H  ++K GF ++ ++ N L+A+YS+        R+F 
Sbjct: 261 PYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFS 320

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M  R+ VS+  ++S  +Q G  D  L+++  M+ +   P+   V S++  C S+GA   
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  A+K  +  +  +  S+L+ Y+K  DV  A + F    ++++  WN M+  Y  
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQ 440

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                ++  +   M  EG+  +++T+ + L+ C+ +    +G QIH  +I++  + ++ +
Sbjct: 441 LDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYV 500

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +  A ++  R+ + DV+SW  +  G+ ++    +   LF +    G 
Sbjct: 501 CSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGI 560

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           + +++ F+  +  C  +  L  G Q+   +   GF  + ++ ++LI ++ RCG ++ A+ 
Sbjct: 561 QFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYL 620

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            F+ +  KN  +WN L+SG   +    + L+ F  +  +  EVN  T+   +       N
Sbjct: 621 AFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLAN 680

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMS 522
            +   QIH  ++KTG+ S   + +SLI  Y   G + +++ EF++ +ER ++ SW AM++
Sbjct: 681 IKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER-NVISWNAMIT 739

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFV 575
                G   EA+ +F  +   G  P+      +L++C+ IG        ++    IH  V
Sbjct: 740 GYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLV 799

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K    +E YV   V+D   + G +  A     +     D +++ TL+ A   H    + 
Sbjct: 800 PK----SEHYV--CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIH----KN 849

Query: 636 MEIFDKM--KLANLQPS-QATFVSV 657
           +EI ++    L  L+P   AT+V +
Sbjct: 850 IEIGERAAHHLLELEPEDSATYVLI 874



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 177/672 (26%), Positives = 316/672 (47%), Gaps = 8/672 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI-QN 123
           ++H  I K GF  +  L ++L+  Y + G     ++VFDE + R++ SW  ++   + Q 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQK 138

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNPF 181
             F +   ++  M   G  PN +    V+K CV  G   F Y   +H        + +P 
Sbjct: 139 SNFQV-FCLFRRMLAEGITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPL 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   +++ Y+K G + +A++VF  I   D+  W AMI G +  G   EA+ +   M    
Sbjct: 197 VANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASE 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I    Y   + L   + +  F++G Q+H L+I+        + N L+ +Y +S  +  A 
Sbjct: 257 IFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAE 316

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F  M  +D +S+N+L  G  +     +   LF K      +P+ +T + LL  C  + 
Sbjct: 317 RIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVG 376

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G+QL   A+  G   +  +  SL+ ++ +C  VE AH  F     +NI  WN +L 
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLV 436

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y      +D  + F  +   G+  N  T+  ++ TC       +  QIH  +IKTGF  
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+CS LI  Y  +GQL  +          D+ SW AM++  V      EA+ +F  + 
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G + D     + +++CA I A ++ + IH      GF  ++ + +A+I  YA+CG I+
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A +AF++  + N+ I +N+L+   A  G   EA+++F +M     + +  T+ S +SA 
Sbjct: 617 EAYLAFEKIGDKNN-ISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAA 675

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +    + +G  +  SM  + G     +    L+ + +++G + DA      M  + +   
Sbjct: 676 ASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVIS 733

Query: 722 YRSLLSGCRIHG 733
           + ++++G   HG
Sbjct: 734 WNAMITGYSQHG 745



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/521 (27%), Positives = 249/521 (47%), Gaps = 25/521 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D I +A  LS   ++ +   G Q+H H +K G + DI L+ +L+ +YSKC       
Sbjct: 358 LKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAH 417

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F      N+V W +++ A  Q        +++  M+  G +PN+F   S+++ C S+G
Sbjct: 418 KFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLG 477

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   +K   + N +V   +++ YAK G +A A R+   +  DDV  W AMI 
Sbjct: 478 ALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIA 537

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       EAL +   M + GI  D   F +A+  C+ +     G+QIH     +    
Sbjct: 538 GYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGA 597

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +SI NALI +Y +   +  A+  FE++ DK+ ISWN+L  G +++    +   +F + +
Sbjct: 598 DLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRML 657

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            + +  N  T+   +     L ++  G Q+  + L  G+  E  V++SLI ++ + G++ 
Sbjct: 658 RTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSIS 717

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F+++S +N+ +WN +++GY  + C  + L+ F  +   G+  N  TF  V+  C 
Sbjct: 718 DAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACS 777

Query: 460 RS-------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-R 511
                    +  + + +IH  + K    S  Y+C  ++      GQLD + E+       
Sbjct: 778 HIGLVKEGLDYFESMFKIHDLVPK----SEHYVC--VVDLLGRAGQLDRAMEYIKEMPIP 831

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
            D   W  ++SA V            H  +E GE+   ++L
Sbjct: 832 ADAMIWRTLLSACV-----------IHKNIEIGERAAHHLL 861



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 154/596 (25%), Positives = 276/596 (46%), Gaps = 8/596 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   N      +++ C++ G+      +HC   K   +  P +  S+++ Y + GD
Sbjct: 49  MEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGD 108

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
              A +VF   S+  V  WN MI  +      F+   +   ML EGIT + YTF   L+ 
Sbjct: 109 QHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKA 168

Query: 256 CSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           C +  D  F+  +Q+H        + S  + N LID+Y K+  ++ A KVF  +  KD++
Sbjct: 169 C-VGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIV 227

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +W  +  G S+N    +   LF     S   P     S +L    K+   +LG QL CL 
Sbjct: 228 TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLV 287

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  GF  E  V + L+ ++ R   +  A  +F  ++ ++  ++N L+SG          L
Sbjct: 288 IKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRAL 347

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  +    ++ +  T   ++  C          Q+H   IK G S+   +  SL+  Y
Sbjct: 348 ELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLY 407

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
                ++ + +F    E  ++  W  M+ A     +  ++  IF  +   G  P+++   
Sbjct: 408 SKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYP 467

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +IL +C ++GA    + IH  VIK GF   VYV S +ID YAK G +  A +   +    
Sbjct: 468 SILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALA-LRILRRLPE 526

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           +DV+ +  +I  Y  H + SEA+++F++M+   +Q     F S +SAC+    + +G  +
Sbjct: 527 DDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQI 586

Query: 674 F-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             +S  + +G   S +    L+ + +R G +++A    E +  + + + + SL+SG
Sbjct: 587 HAQSYAAGFGADLSIN--NALISLYARCGRIQEAYLAFEKIGDKNNIS-WNSLVSG 639



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 241/485 (49%), Gaps = 3/485 (0%)

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +++ M   G+  +   ++  L+GC          ++H  I +S  +    ++++L+D 
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y +      A KVF+  +++ V SWN +   F   K+  Q   LF + +  G  PN  TF
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 351 SILLRQC-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           + +L+ C G  +  +   Q+     + GF     V + LI ++ + G +E A  VF+ + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            K+I TW  ++SG   N  + + +  FC++  S +         V+    + +  ++  Q
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H  +IK GF S  Y+C+ L+  Y    +L ++    +     D  S+ +++S LV QG 
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           +  A+ +F  +     KPD   + ++L++CA++GA  +   +H   IK G + ++ +  +
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KC D++ A   F  +   N ++++N +++AY     +S++ EIF +M++  + P
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETEN-IVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIP 461

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +Q T+ S++  C+  G +  G  +   +  + G Q +      L+DM ++ G L  A  +
Sbjct: 462 NQFTYPSILRTCTSLGALYLGEQIHTHV-IKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 710 IEIMP 714
           +  +P
Sbjct: 521 LRRLP 525


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 183/662 (27%), Positives = 347/662 (52%), Gaps = 7/662 (1%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD+  +R+  S+T ++    ++G      +++++++  G   +     SV+KV  ++  
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
             FG  +HC  +K     +  VG S+++ Y K  +      VF  +   +V  W  +I G
Sbjct: 113 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISG 172

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA      E L +   M  EG   + +TF  AL   +       G Q+H +++++ ++ +
Sbjct: 173 YARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 232

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I + N+LI++Y+K   +  A  +F++   K V++WN++  G++ N    +   +F+   L
Sbjct: 233 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 292

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +  R +  +F+ +++ C  L +L    QL C  +  GF+ ++N+ ++L+  + +C A+  
Sbjct: 293 NHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLD 352

Query: 401 AHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           A  +F    +  N+ +W  ++SG+  N    + +  F  +   GV  N  T+  ++    
Sbjct: 353 ALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP 412

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                    ++H  ++KT +     + ++L+ +YV  G++D + +  +G +  D+ +W A
Sbjct: 413 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSA 468

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ-RTKSIHPFVIKL 578
           M++     G    A+ IF  L + G KP+E+   +ILN CAA  A   + K  H F IK 
Sbjct: 469 MLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKS 528

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
             ++ + V+SA++  YAK G I+ A   F +     D++ +N++I  YA HG   +A+++
Sbjct: 529 RLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKALDV 587

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F +MK   ++    TF+ V +AC+H GLV++G   F  M     + P+ +   C+VD+ S
Sbjct: 588 FKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 647

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G LE A  VI+ MP     T++R++L+ CR+H   ELG  A+EK++ ++P++ AA+VL
Sbjct: 648 RAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVL 707

Query: 759 LS 760
           LS
Sbjct: 708 LS 709



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 264/584 (45%), Gaps = 11/584 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +S  L   + G Q+H   +K GF +D+ +  +L+  Y K   F  G  VFDEM ERN+
Sbjct: 104 LKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+WT ++S   +N   +  L +++ M+  G  PN F   + + V    G    G  +H  
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K  ++K   V  S++N Y K G+V  A  +F       V  WN+MI GYA  G   EA
Sbjct: 224 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 283

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +  SM    + + + +F + ++ C+ + +     Q+H  +++       +I  AL+  
Sbjct: 284 LGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVA 343

Query: 291 YIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           Y K   M  A ++F+      +V+SW  +  GF +N    +   LF +    G RPN  T
Sbjct: 344 YSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFT 403

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +S++L     +   ++  Q+    +   +     V ++L+  + + G V+ A  VF  + 
Sbjct: 404 YSVILTALPVISPSEVHAQV----VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID 459

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG- 468
            K+I  W+ +L+GY         +K F  + + GV+ N  TF  ++  C  +      G 
Sbjct: 460 NKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGK 519

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q HG  IK+   S   + S+L+  Y   G ++++ E        D+ SW +M+S     G
Sbjct: 520 QFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHG 579

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVY 585
              +A+ +F  + +   K D      +  +C   G  +  +     ++   K+    E  
Sbjct: 580 QAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE-- 637

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             S ++D Y++ G ++ A    D   N     ++ T++ A   H
Sbjct: 638 HNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVH 681



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/576 (25%), Positives = 271/576 (47%), Gaps = 14/576 (2%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS-----ISSD-DVGCWNAMIG 219
           S+  F LK  I  N  +G    NF       A++ R++Y+      S D D   + +++ 
Sbjct: 12  SLENFKLKFCIYANE-LGNLKPNFRIYCFGAASSSRLYYAHNLFDKSPDRDRESYTSLLF 70

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G++  G   EA  +  ++   G+ MD   F + L+  + + D   GRQ+H   I+     
Sbjct: 71  GFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLD 130

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +S+  +L+D Y+K S       VF+ M +++V++W TL  G++ N    +  +LF +  
Sbjct: 131 DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQ 190

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G++PN  TF+  L    +      GLQ+  + +  G      V++SLI ++ +CG V 
Sbjct: 191 DEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 250

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +FD    K++ TWN ++SGY  N  D + L  F ++  + V ++  +F  +++ C 
Sbjct: 251 KARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCA 310

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWG 518
             +  +   Q+H +++K GF     I ++L+ +Y      LD    F       ++ SW 
Sbjct: 311 NLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWT 370

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AM+S  +      EAV +F  +   G +P+E+    IL +   I   +    +H  V+K 
Sbjct: 371 AMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKT 426

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
            +     V +A++DAY K G +  A   F    ++ D++ ++ ++  YA  G    A++I
Sbjct: 427 NYERSSTVGTALLDAYVKLGKVDEAAKVF-SGIDNKDIVAWSAMLAGYAQAGETEAAIKI 485

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F ++    ++P++ TF S+++ C+           F     +  +  S      L+ M +
Sbjct: 486 FSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYA 545

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           + G++E A+ V +    +     + S++SG   HG 
Sbjct: 546 KKGHIESAEEVFK-RQREKDLVSWNSMISGYAQHGQ 580


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 194/713 (27%), Positives = 364/713 (51%), Gaps = 7/713 (0%)

Query: 52  SLSENLKSRVLGTQVH---GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S+S  L S    TQ+H     I+ LG  + +     LIA Y+          VF   +  
Sbjct: 77  SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 136

Query: 109 NLV-SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           N V  W  I+ A   NG F   L +Y + +     P+ +   SV+  C  +   E   SI
Sbjct: 137 NNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 196

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   L +    + ++G ++++ Y +  D+  A +VF  +   DV  WN++I GY   GY 
Sbjct: 197 HDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYW 256

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            EAL +       G+  D YT  + L+ C  +   + G  IHGLI +  ++  + + N L
Sbjct: 257 NEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGL 316

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           + MY K +G+    ++F++M  +D +SWNT+  G+S+     ++  LF + + +  +P+ 
Sbjct: 317 LSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDL 375

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           +T + +L+ CG L DL+ G  +    +  G+  +   ++ LI M+ +CG +  +  VF  
Sbjct: 376 LTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSG 435

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  K+  +WN +++ Y  N    + +K F  + ++ V+ +  T+  ++    +  +  + 
Sbjct: 436 MKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLG 494

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            ++H  + K GF+S   + ++L+  Y   G++ +S +     +  D+ +W  ++++ VH 
Sbjct: 495 KELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHS 554

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
              +  + +   +   G  PD   + +IL  C+ + A ++ K IH  + KLG  ++V V 
Sbjct: 555 EDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVG 614

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +I+ Y+KCG ++ +   F +   + DV+ +  LI A   +G   +A+  F +M+ A +
Sbjct: 615 NVLIEMYSKCGSLRNSFQVF-KLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 673

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P    FV+++ ACSH GLV++G   F  M   Y ++P  + Y C+VD+LSR+  L+ A+
Sbjct: 674 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 733

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             I  MP +P  +++ +LLS CR+ G+ E+ +  SE+++ L P +   +VL+S
Sbjct: 734 DFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVS 786



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 13/329 (3%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQF      + D + +   L    +L     G  VH +++  G+  D    N LI MY+K
Sbjct: 369 NQF------KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 422

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       VF  M  ++ VSW  +++  IQNG FD  +K++  MKT+   P+      +
Sbjct: 423 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTD-VKPDSVTYVML 481

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           + +   +G    G  +HC   K+    N  V  ++++ YAK G++  + +VF ++ + D+
Sbjct: 482 LSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 541

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN +I    H       L ++S M  EG+T D  T ++ L  CSL+A    G++IHG 
Sbjct: 542 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 601

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF---GGFSENKNP 328
           I +  +E  + + N LI+MY K   +  +F+VF+ M  KDV++W  L    G + E K  
Sbjct: 602 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGK-- 659

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQC 357
            +    F +   +G  P+HV F  ++  C
Sbjct: 660 -KAVRAFGEMEAAGIVPDHVAFVAIIFAC 687



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 138/284 (48%), Gaps = 2/284 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +     LS+S  L    LG ++H  + K+GF ++I + N L+ MY+KCG  G  L
Sbjct: 471 VKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSL 530

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+ M  R++++W  I+++ + + + ++GL+M   M+T G  P+   + S++ VC  + 
Sbjct: 531 KVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLA 590

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH    K+ +E +  VG  ++  Y+K G +  + +VF  + + DV  W A+I 
Sbjct: 591 AKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALIS 650

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVE 278
                G G +A+     M   GI  D   F+  +  CS     + G    H +    ++E
Sbjct: 651 ACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 710

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG 321
             I     ++D+  +S+ +D A      M  K D   W  L   
Sbjct: 711 PRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSA 754



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 95/188 (50%), Gaps = 8/188 (4%)

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           + +  +I  + A+     +   +H  +I LG +  V  ++ +I  YA   D   +   F 
Sbjct: 72  QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 131

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
            +  SN+V  +N++I A  H+GL SEA+ ++ + +   LQP   TF SV++AC+  GL+D
Sbjct: 132 LASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACA--GLLD 189

Query: 669 KGCLLFKSM-DSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
               + KS+ D    M    D Y    L+DM  R   L+ A+ V E MP +   + + SL
Sbjct: 190 FE--MAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVS-WNSL 246

Query: 726 LSGCRIHG 733
           +SG   +G
Sbjct: 247 ISGYNANG 254


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 216/719 (30%), Positives = 352/719 (48%), Gaps = 39/719 (5%)

Query: 63  GTQVHG--HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWTLIV 117
           GT +H   H   LGF  D    N LI MY KCG +     VF  MA R   +LVSW  ++
Sbjct: 249 GTWLHSLLHEASLGF--DPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMI 306

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIR 175
           SA+++ G     + ++  ++  G  PN   + +++    + G  +FG +   H    +  
Sbjct: 307 SASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGV-DFGAARGFHGRIWESG 365

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVV 234
             ++  +G ++++ YAK G  +AA  VF  I    DV  WN M+G         + +N  
Sbjct: 366 YLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTF 425

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII---RSEVECSISIVNALIDMY 291
             ML  GI  +K +FI  L  CS     D GR+IH LI+   R  VE S++ +  L+ MY
Sbjct: 426 HHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM--LVSMY 483

Query: 292 IKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
            K   +  A  VF+ M    + +++WN + G +++N    +      + +  G  P+ ++
Sbjct: 484 GKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALS 543

Query: 350 FSILLRQCG--------KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           F+ +L  C         ++  L+ G +  CL             ++LI M  RC  +E A
Sbjct: 544 FTSVLSSCYCSQEAQVLRMCILESGYRSACL------------ETALISMHGRCRELEQA 591

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            SVF+ + + ++ +W  ++S    N    +V   F  +   GV  +  T    ++TC  S
Sbjct: 592 RSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLAS 651

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
               +   IH  + + G  +   + ++L+  Y N G    +  F    +  D+ SW  M 
Sbjct: 652 TTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMS 711

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A    G   EAV +F  +   G KPD+    T LN           K  H    + G +
Sbjct: 712 AAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLD 771

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V VA+ ++  YAKCG +  A   F  + +   V++ N +I A A HG   EA+++F K
Sbjct: 772 SDVSVATGLVKLYAKCGKLDEAMSLFRGACDWT-VVLLNAIIGALAQHGFSEEAVKMFWK 830

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+   ++P  AT VS++SAC H G+V++GC  F +M   +G+ P+ + Y C VD+L R G
Sbjct: 831 MQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAG 890

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            LE A+ +I  MPF+ +  V+ SLL  C++ G+ ELGE  ++++L L P N AAHV+LS
Sbjct: 891 QLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLS 949



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 167/666 (25%), Positives = 300/666 (45%), Gaps = 25/666 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  I   G    +FL N LI MY +CG       +F +M ERN+VSWT ++SA  Q
Sbjct: 44  GKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK--- 178
            G F     ++  M   +   PN + + +++  C +      G SIH    ++ +E+   
Sbjct: 104 CGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERAST 163

Query: 179 -NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVSS 236
               VG +++N YAK G +  A  VF +I   DV  W AM G YA     + +AL +   
Sbjct: 164 TATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML + +  +  TFI AL  C+ + D   G  +H L+  + +       NALI+MY K   
Sbjct: 224 MLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEASLGFDPLASNALINMYGKCGD 280

Query: 297 MDYAFKVFERMADK---DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-SI 352
            + A+ VF+ MA +   D++SWN +     E    G   ++F +  L G RPN VT  +I
Sbjct: 281 WEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITI 340

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK- 411
           L       +D              G+L +  + +++I M+ +CG    A +VF  + +K 
Sbjct: 341 LNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKC 400

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN +L           V+ TF ++  +G++ N  +F  ++  C  SE      +IH
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIH 460

Query: 472 GAIIKTGFSSC-GYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQ 527
             I+          + + L+  Y   G +  +   F+      R  + +W  M+ A    
Sbjct: 461 SLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSR-SLVTWNVMLGAYAQN 519

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
             + EA      +++ G  PD     ++L+SC      Q  + +   +++ G+ +   + 
Sbjct: 520 DRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC-LE 575

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+I  + +C +++ AR  F++  +  DV+ +  ++ A A +    E   +F +M+L  +
Sbjct: 576 TALISMHGRCRELEQARSVFNE-MDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGV 634

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P + T  + +  C     +  G ++   + ++ G++        L++M S  G   +A 
Sbjct: 635 IPDKFTLATTLDTCLASTTLGLGKVIHACV-TEIGLEADIAVENALLNMYSNCGDWREAL 693

Query: 708 HVIEIM 713
              E M
Sbjct: 694 SFFETM 699



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 153/580 (26%), Positives = 259/580 (44%), Gaps = 27/580 (4%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           ++++ CV       G   H       +E++ F+G  ++N Y + G +  A  +F  +   
Sbjct: 30  ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQI 268
           +V  W A+I   A CG    A  +  +ML E     + YT +  L  C+   D  IGR I
Sbjct: 90  NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 269 HGLIIRSEVE----CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           H +I    +E     +  + NA+I+MY K   ++ A  VF  + +KDV+SW  + G +++
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQ 209

Query: 325 NKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +     A  +F + +L    PN +TF   L  C  L D   G  L  L LH   L  + 
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSL-LHEASLGFDP 265

Query: 384 VTS-SLIYMFCRCGAVEMAHSVFDNVSYK---NITTWNELLSGYCFNCCDADVLKTFCNI 439
           + S +LI M+ +CG  E A+SVF  ++ +   ++ +WN ++S         D +  F  +
Sbjct: 266 LASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRL 325

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
              G+  N  T   ++     S       +  HG I ++G+     I +++I  Y   G 
Sbjct: 326 RLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGF 385

Query: 499 LDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
              ++  F     + D+ SW  M+ A   +    + V  FH ++ AG  P++     ILN
Sbjct: 386 FSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILN 445

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSND 615
           +C+   A    + IH  ++    +  E  VA+ ++  Y KCG I  A + F +    S  
Sbjct: 446 ACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRS 505

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA--CSHKGLVDKGCLL 673
           ++ +N ++ AYA +    EA     +M    + P   +F SV+S+  CS +  V + C+L
Sbjct: 506 LVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCIL 565

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
               +S Y    S      L+ M  R   LE A+ V   M
Sbjct: 566 ----ESGY---RSACLETALISMHGRCRELEQARSVFNEM 598



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 235/504 (46%), Gaps = 19/504 (3%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           + +YT +  LQ C    D   G+  H LI  + +E  + + N LI+MY++   ++ A  +
Sbjct: 25  LQEYTAL--LQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLD 362
           F +M +++V+SW  L    ++     +  +LF   +L S + PN  T   +L  C    D
Sbjct: 83  FSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSL-----IYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           L +G  +  +    G L+  + T++L     I M+ +CG++E A +VF  +  K++ +W 
Sbjct: 143 LAIGRSIHAMIWELG-LERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWT 201

Query: 418 ELLSGYCF-NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR-SENQQMVGQIHGAII 475
            +   Y        D L+ F  +    +  N  TF   +  C    +   +   +H A +
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASL 261

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAER--LDMASWGAMMSALVHQGHNHE 532
             GF       ++LI  Y   G  + ++  F   A R  LD+ SW AM+SA V  G + +
Sbjct: 262 --GFDPLA--SNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGD 317

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVI 591
           A+ IF  L   G +P+   L TILN+ AA G  +   +  H  + + G+  +V + +A+I
Sbjct: 318 AMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAII 377

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             YAKCG    A   F +     DVI +NT++ A        + +  F  M LA + P++
Sbjct: 378 SMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNK 437

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            +F+++++ACS+   +D G  +   + ++            LV M  + G + +A+ V +
Sbjct: 438 VSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFK 497

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNK 735
            MP      V  +++ G     ++
Sbjct: 498 EMPLPSRSLVTWNVMLGAYAQNDR 521



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 6/282 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA +L       +  LG  +H  + ++G   DI ++N L+ MYS CG +   L  F
Sbjct: 637 DKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFF 696

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M  R+LVSW ++ +A  Q G     + ++  M+  G  P++    + + V        
Sbjct: 697 ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H  A +  ++ +  V   ++  YAK G +  A  +F       V   NA+IG  A
Sbjct: 757 DGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALA 816

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE---VEC 279
             G+  EA+ +   M  EG+  D  T ++ +  C      + G      +   E   +  
Sbjct: 817 QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG--CSSFLTMKEYFGISP 874

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKD-VISWNTLFG 320
           ++      +D+  ++  +++A ++  +M  +D  + W +L G
Sbjct: 875 TLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/699 (29%), Positives = 341/699 (48%), Gaps = 2/699 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG + K G  +D+++   ++ +Y   G      +VF+EM +RN+VSWT ++     
Sbjct: 78  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 137

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE +  + +Y  M+  G   NE ++  V+  C  +     G  I    +K  +E    V
Sbjct: 138 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 197

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++    +G+V  A  +F  +S  D   WN++   YA  G+  E+  + S M     
Sbjct: 198 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 257

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  T    L     V     GR IHGL+++   +  + + N L+ MY  +     A  
Sbjct: 258 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 317

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M  KD+ISWN+L   F  +        L    I SG   N+VTF+  L  C     
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G  L  L +  G    + + ++L+ M+ + G +  +  V   +  +++  WN L+ G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSS 481
           Y  +      L  F  +   GV  N  T   V+  C    +    G+ +H  I+  GF S
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SLI  Y   G L +S +  NG +  ++ +W AM++A  H GH  E + +   + 
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G   D++     L++ A +   +  + +H   +KLGF  + ++ +A  D Y+KCG+I 
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 617

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                   S N + +  +N LI A   HG   E    F +M    ++P   TFVS+++AC
Sbjct: 618 EVVKMLPPSVNRS-LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLVDKG   +  +   +G++P+ +   C++D+L R+G L +A+  I  MP +P+  V
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +RSLL+ C+IHGN + G  A+E L  L P++D+ +VL S
Sbjct: 737 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 775



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 162/642 (25%), Positives = 314/642 (48%), Gaps = 11/642 (1%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+K G       +FD M  RN VSW  ++S  ++ G +  G++ +  M   G  P+ F 
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 148 VGSVMKVCVSMGAS-EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           + S++  C   G+    G  +H F  K  +  + +V  ++L+ Y   G V+ + +VF  +
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +V  W +++ GY+  G   E +++   M  EG+  ++ +    +  C L+ D  +GR
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QI G +++S +E  +++ N+LI M      +DYA  +F++M+++D ISWN++   +++N 
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +  ++  +F          N  T S LL   G +     G  +  L +  GF     V +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+ M+   G    A+ VF  +  K++ +WN L++ +  +    D L   C++  SG  V
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  TF   +  C   +  +    +HG ++ +G      I ++L+  Y   G++  S    
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AY 565
               R D+ +W A++          +A+  F ++   G   +   + ++L++C   G   
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +R K +H +++  GF ++ +V +++I  YAKCGD+  ++  F+   N N +I +N ++ A
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAMLAA 539

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
            AHHG   E +++  KM+   +   Q +F   +SA +   ++++G  L   +  + G + 
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEH 598

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
               +    DM S+ G + +   V++++P    P+V RSL S
Sbjct: 599 DSFIFNAAADMYSKCGEIGE---VVKMLP----PSVNRSLPS 633



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/665 (25%), Positives = 311/665 (46%), Gaps = 45/665 (6%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK   LG Q+ G +VK G  + + ++N+LI+M    G   +   +FD+M+ER+ +SW  I
Sbjct: 173 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 232

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            +A  QNG  +   +++  M+      N   V +++ V   +   ++G  IH   +K+  
Sbjct: 233 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           +    V  ++L  YA  G    A  VF  + + D+  WN+++  + + G   +AL ++ S
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  G +++  TF +AL  C     F+ GR +HGL++ S +  +  I NAL+ MY K   
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  + +V  +M  +DV++WN L GG++E+++P +  + F    + G   N++T   +L  
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472

Query: 357 CGKLLDLDL---GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           C  LL  DL   G  L    +  GF  +E+V +SLI M+ +CG +  +  +F+ +  +NI
Sbjct: 473 C--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 530

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TWN +L+    +    +VLK    +   GV ++  +F   +    +    +   Q+HG 
Sbjct: 531 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 590

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K GF    +I ++    Y   G++    +    +    + SW  ++SAL   G+  E 
Sbjct: 591 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 650

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVID 592
              FH ++E G KP      ++L +C+  G   +  + +  + +  G    +     VID
Sbjct: 651 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 710

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
              + G +                                +EA     KM    ++P+  
Sbjct: 711 LLGRSGRL--------------------------------AEAETFISKMP---MKPNDL 735

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIE 711
            + S++++C   G +D+G    K+ ++   ++P  D  Y    +M +  G  ED ++V +
Sbjct: 736 VWRSLLASCKIHGNLDRG---RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792

Query: 712 IMPFQ 716
            M F+
Sbjct: 793 QMGFK 797



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 12/431 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS+  ++  +  G  +HG +VK+GF + + + N L+ MY+  G       VF +M  ++L
Sbjct: 268 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 327

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SW  ++++ + +G     L +   M ++G   N     S +  C +    E G  +H  
Sbjct: 328 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 387

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +   +  N  +G ++++ Y K+G+++ + RV   +   DV  WNA+IGGYA      +A
Sbjct: 388 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 447

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALID 289
           L    +M  EG++ +  T ++ L  C L  D  + G+ +H  I+ +  E    + N+LI 
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  +  +F  + ++++I+WN +    + + +  +   L  K    G   +  +
Sbjct: 508 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 567

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           FS  L    KL  L+ G QL  LA+  GF  +  + ++   M+ +CG +     +     
Sbjct: 568 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 627

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +WN L+S    +    +V  TF  + E G++    TF  ++  C           
Sbjct: 628 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS---------- 677

Query: 470 IHGAIIKTGFS 480
            HG ++  G +
Sbjct: 678 -HGGLVDKGLA 687



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    ++ LS +  L     G Q+HG  VKLGF +D F+ N    MYSKCG  G  +++ 
Sbjct: 564 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VS 157
                R+L SW +++SA  ++G F+     + +M   G  P      S++  C     V 
Sbjct: 624 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 683

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGC-SVLNFYAKLGDVAAAE 200
            G + +      F L+  IE      C  V++   + G +A AE
Sbjct: 684 KGLAYYDMIARDFGLEPAIEH-----CICVIDLLGRSGRLAEAE 722


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 199/709 (28%), Positives = 364/709 (51%), Gaps = 11/709 (1%)

Query: 62  LGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG ++H  + +    +ND  L   +I MYS CG       VFD + ++NL  W  ++S+ 
Sbjct: 99  LGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSY 158

Query: 121 IQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            +N  +   L+M+V M T +G +P+ F    V+K C  +   + G ++H   +K R+ ++
Sbjct: 159 SRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED 218

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FV  ++++FY   G V+ A RVF  +   ++  WN+MI  ++  G   E   ++  M+ 
Sbjct: 219 VFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMME 278

Query: 240 E----GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +      T D  T    L  C+   +  +G+ +HGL ++  ++  + + NAL+DMY K  
Sbjct: 279 KDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCG 338

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSIL 353
            ++ A  +F+   +K+V+SWNT+ GGFS   +  +T  L  + +  G   R + VT    
Sbjct: 339 CINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNA 398

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +  C +   L    +L C +L   F+ + E V ++ +  + +CG++  AH VF ++  K 
Sbjct: 399 VPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKT 458

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +WN L+ GY  +      L  +  +  SG+  +  T   ++  C + ++ ++  ++HG
Sbjct: 459 VNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHG 518

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            II+       ++  SL+  Y++ G+L  +    +  E   + SW  M++  +  G    
Sbjct: 519 LIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPER 578

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+++F  +V  G +P E  + ++  +C+ + + +  +  H + +K       ++A +VID
Sbjct: 579 ALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVID 638

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAK G +  +   F+       V  +N ++M Y  HG   EA+++F++M+     P + 
Sbjct: 639 MYAKNGSVMESFKVFN-GLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDEL 697

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIE 711
           TF+ V++AC+H GLV +G      M + +GM P+   Y C++DML R G L++A K   E
Sbjct: 698 TFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATE 757

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            M  +P   ++  LLS CRIH N E+GE  + KL +  P+    +VLLS
Sbjct: 758 EMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLS 806



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 242/526 (46%), Gaps = 25/526 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG  +KL    ++ + N L+ MYSKCG       +F     +N+VSW  +V    
Sbjct: 307 VGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFS 366

Query: 122 QNGEFDMGLKMYVDMKTNG--FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEK 178
             G+      +   M   G     +E  + + + VC           +HC++LK   +  
Sbjct: 367 AAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHN 426

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N  V  + +  YAK G ++ A RVF SI S  V  WNA+IGGY+       +L+    M 
Sbjct: 427 NELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+  D +T  + L  CS +    +G+++HGLIIR+ +E    +  +L+ +YI    + 
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +F+ M DK ++SWNT+  G+ +N  P +  SLF + +L G +P  ++   +   C 
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG +    AL C   D   +  S+I M+ + G+V  +  VF+ +  +++ +WN 
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNA 666

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI---- 474
           ++ GY  +    + +K F  +  +G   +  TF  V+  C  S      G +H  +    
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHS------GLVHEGLTYLD 720

Query: 475 -IKTGF----SSCGYICSSLIKSYVNFGQLDNSFEFSNG--AERLDMASWGAMMSA-LVH 526
            +KT F    +   Y C  +I   V  G+LD + + +    +E   +  W  ++S+  +H
Sbjct: 721 QMKTLFGMNPTLKHYAC--VIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIH 778

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           +             V   EKP+ Y+L  + N  A  G +   + + 
Sbjct: 779 KNLEMGEKIAAKLFVSEPEKPENYVL--LSNLYAGSGKWDEVRKVR 822



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 162/356 (45%), Gaps = 30/356 (8%)

Query: 28  LCGNNQFCSDSFLRKDPIFLAKS-------------LSLSENLKSRVLGTQVHGHIVKLG 74
           L G     SD  L  D  F  KS             LS    +KS  LG +VHG I++  
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
              D F+  +L+++Y  CG       +FD M ++ LVSW  +V+  +QNG  +  L ++ 
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFR 584

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M   G  P E ++ SV   C  + +   G   H +ALK  +E N F+ CSV++ YAK G
Sbjct: 585 QMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNG 644

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            V  + +VF  +    V  WNAM+ GY   G   EA+ +   M   G   D+ TF+  L 
Sbjct: 645 SVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLT 704

Query: 255 GCS---LVAD----FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV-FER 306
            C+   LV +     D  + + G+        ++     +IDM +++  +D A K+  E 
Sbjct: 705 ACNHSGLVHEGLTYLDQMKTLFGM------NPTLKHYACVIDMLVRAGKLDEALKIATEE 758

Query: 307 MADKDVIS-WNTLFGGFSENKNPGQTASLFHK-FILSGSRP-NHVTFSILLRQCGK 359
           M+++  +  WN L      +KN      +  K F+    +P N+V  S L    GK
Sbjct: 759 MSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGK 814


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 210/718 (29%), Positives = 358/718 (49%), Gaps = 16/718 (2%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   A  L      KS   G  VH HI+  G   + ++QN+LI MY+KCG     L VF+
Sbjct: 26  PARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFE 85

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +   N+ SWT +++A  + G     L ++  M+ +G  P+ F   +V+  C S GA   
Sbjct: 86  LLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNE 145

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G +IH  A+   +E    VG +++N Y K G V  A+ VF  +   ++  WNA+I   A 
Sbjct: 146 GKAIHDCAVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQ 204

Query: 224 CGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G+  +A+ V   M  +G +  +  TF++ +  CS + D   G+  H  IIR+  +  + 
Sbjct: 205 NGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+L++MY K   +D A  VFE+M+ ++V+SW  +   +++    G   + F  +    
Sbjct: 265 VGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ---GFIRAAFDLYKRMD 321

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             PN VTF  ++  C +  DL    Q+    +  GF  +  +   L+ M+ +CG+V+ A 
Sbjct: 322 CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAW 381

Query: 403 SVFDNVSYK--NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           S+F+N+  +  N  TWN ++SG   +      L+ F  +   GV  N  T+   +E C  
Sbjct: 382 SIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSS 441

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGA 519
             +     Q+H  I+         + +++I  Y   G LD +  EF+   ER D+ SW  
Sbjct: 442 LNDLTRGRQLHARILLENIHEAN-LSNAVINMYGKCGSLDEAMDEFAKMPER-DVVSWNT 499

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M++     G   +A+  F  +   G   D       +++C ++ +    K+IH  V    
Sbjct: 500 MIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAA 559

Query: 580 --FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
                +  VA+A++  YA+CG +  A+  F +S +S +++ ++ LI A A HG  +EA++
Sbjct: 560 PCLEQDPGVATALVTMYARCGSLHDAKSVFWRS-HSRNLVTWSNLIAACAQHGRENEALD 618

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F +M+L   +P   TF ++++ACS +G+V  G   F SM   Y +  S D +G +VD+L
Sbjct: 619 LFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLL 678

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
            R G+LE+A+   ++M   P    +  LL  C +HG+ E G   ++  L L  KN A+
Sbjct: 679 GRAGWLEEAE---QVMRKNPCALAHAVLLGACHVHGDVERGIRIAQSALELDWKNSAS 733



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 202/428 (47%), Gaps = 8/428 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R +       +    NL     G   H  I++ GF + +F+ N+L+ MY KCG   
Sbjct: 221 DGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVD 280

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               VF++M+ RN+VSWT+++ A  Q G       +Y  M      PN     +VM  C+
Sbjct: 281 RARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSCL 337

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS--SDDVGCW 214
                     IH   +    + +  +   ++  Y K G V +A  +F ++   S++   W
Sbjct: 338 RPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTW 397

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           NAMI G A  G   +AL     M  EG+  +  T++ +L+ CS + D   GRQ+H  I+ 
Sbjct: 398 NAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILL 457

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +    ++ NA+I+MY K   +D A   F +M ++DV+SWNT+   ++++ +  Q    
Sbjct: 458 ENIH-EANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEF 516

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN--VTSSLIYMF 392
           F +  L G   +  T+   +  CG +  L LG  +  +        E++  V ++L+ M+
Sbjct: 517 FKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMY 576

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            RCG++  A SVF     +N+ TW+ L++    +  + + L  F  +   G + +  TF 
Sbjct: 577 ARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFS 636

Query: 453 YVVETCCR 460
            +V  C R
Sbjct: 637 TLVAACSR 644



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P  Y   ++L  C    +    K +H  ++  G     Y+ + +I  YAKCG ++ A  
Sbjct: 25  QPARY--ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALE 82

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F+   N N V  +  LI AYA  G + E + +F KM+L   +P    F +V++ACS  G
Sbjct: 83  VFELLPNPN-VFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAG 141

Query: 666 LVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            +++G     C +   M++Q            +V++  + G + +AK V E +P
Sbjct: 142 ALNEGKAIHDCAVLAGMETQV-------VGNAIVNLYGKCGRVHEAKAVFERLP 188


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 215/717 (29%), Positives = 350/717 (48%), Gaps = 35/717 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWTLIVSA 119
           GT +H  + + G   D    N LI MY KCG +     VF  MA R   +LVSW  ++SA
Sbjct: 249 GTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIE 177
           +++ G     + ++  ++  G  PN   + +++    + G  +FG +   H    +    
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGV-DFGAARKFHGRIWESGYL 367

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSS 236
           ++  VG ++++ YAK G  +AA  VF  I    DV  WN M+G         + +N    
Sbjct: 368 RDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII---RSEVECSISIVNALIDMYIK 293
           ML  GI  +K +FI  L  CS     D GR+IH LI+   R  VE S++ +  L+ MY K
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATM--LVSMYGK 485

Query: 294 SSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
              +  A  VF+ M    + +++WN + G +++N    +      + +  G  P+ ++F+
Sbjct: 486 CGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFT 545

Query: 352 ILLRQCG--------KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            +L  C         ++  L+ G +  CL             ++LI M  RC  +E A S
Sbjct: 546 SVLSSCYCSQEAQVLRMCILESGYRSACL------------ETALISMHGRCRELEQARS 593

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD + + ++ +W  ++S    N    +V   F  +   GV  +  T    ++TC  S  
Sbjct: 594 VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
             +   IH  + + G  +   + ++L+  Y N G    +  F    +  D+ SW  M +A
Sbjct: 654 LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               G   EAV +F  +   G KPD+    T LN           K  H    + G +++
Sbjct: 714 YAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSD 773

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V VA+ ++  YAKCG +  A   F  +     V++ N +I A A HG   EA+++F KM+
Sbjct: 774 VSVATGLVKLYAKCGKLDEAISLFRGACQWT-VVLLNAIIGALAQHGFSEEAVKMFWKMQ 832

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              ++P  AT VS++SAC H G+V++GC  F +M   +G+ P+ + Y C VD+L R G L
Sbjct: 833 QEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQL 892

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E A+ +I  MPF+ +  V+ SLL  C++ G+ ELGE  ++++L L P N AAHV+LS
Sbjct: 893 EHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLS 949



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 171/668 (25%), Positives = 305/668 (45%), Gaps = 29/668 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G + H  I   G    +FL N LI MY +CG       +F +M ERN+VSWT ++SA  Q
Sbjct: 44  GKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN-- 179
           +G F     ++  M   +   PN + + +++  C +      G SIH    ++ +E+   
Sbjct: 104 SGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLEREST 163

Query: 180 --PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVSS 236
               VG +++N YAK G    A  VF +I   DV  W AM G YA     + +AL +   
Sbjct: 164 TATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML + +  +  TFI AL  C+ + D   G  +H L+  + +       NALI+MY K   
Sbjct: 224 MLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLGFDPLAGNALINMYGKCGD 280

Query: 297 MDYAFKVFERMADK---DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-SI 352
            + A+ VF+ MA +   D++SWN +     E    G   ++F +  L G RPN VT  +I
Sbjct: 281 WEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITI 340

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK- 411
           L       +D     +        G+L +  V +++I M+ +CG    A +VF  + +K 
Sbjct: 341 LNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKC 400

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN +L           V+ TF ++  +G++ N  +F  ++  C  SE      +IH
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIH 460

Query: 472 GAIIKTGFSSCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMAS-----WGAMMSALV 525
             I+        Y+ SS+    V+ +G+  +  E     + + + S     W  M+ A  
Sbjct: 461 SLILTRRRD---YVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYA 517

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
               + EA      +++ G  PD     ++L+SC      Q  + +   +++ G+ +   
Sbjct: 518 QNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY---CSQEAQVLRMCILESGYRSAC- 573

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + +A+I  + +C +++ AR  FD+  +  DV+ +  ++ A A +    E   +F +M+L 
Sbjct: 574 LETALISMHGRCRELEQARSVFDE-MDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLE 632

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P + T  + +  C     +  G ++   + ++ G++        L++M S  G   +
Sbjct: 633 GVIPDKFTLATTLDTCLDSTTLGLGKIIHACV-TEIGLEADIAVENALLNMYSNCGDWRE 691

Query: 706 AKHVIEIM 713
           A    E M
Sbjct: 692 ALSFFETM 699



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 147/579 (25%), Positives = 255/579 (44%), Gaps = 25/579 (4%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           ++++ CV       G   H       +E++ F+G  ++N Y + G +  A  +F  +   
Sbjct: 30  ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQI 268
           +V  W A+I   A  G    A  +  +ML E     + YT +  L  C+   D  IGR I
Sbjct: 90  NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 269 HGLI----IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           H +I    +  E   +  + NA+I+MY K    + A  VF  + +KDV+SW  + G +++
Sbjct: 150 HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQ 209

Query: 325 NKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +     A  +F + +L    PN +TF   L  C  L D   G  L  L    G   +  
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLGFDPL 266

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYK---NITTWNELLSGYCFNCCDADVLKTFCNIW 440
             ++LI M+ +CG  E A+ VF  ++ +   ++ +WN ++S         D +  F  + 
Sbjct: 267 AGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 441 ESGVEVNGCTFFYVVETCCRSE-NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             G+  N  T   ++     S  +     + HG I ++G+     + +++I  Y   G  
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386

Query: 500 DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
             ++  F     + D+ SW  M+ A   +    + V  FH ++ AG  P++     ILN+
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446

Query: 559 CAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDV 616
           C+   A    + IH  ++    +  E  VA+ ++  Y KCG I  A + F +    S  +
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSL 506

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA--CSHKGLVDKGCLLF 674
           + +N ++ AYA +    EA     +M    + P   +F SV+S+  CS +  V + C+L 
Sbjct: 507 VTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCIL- 565

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              +S Y    S      L+ M  R   LE A+ V + M
Sbjct: 566 ---ESGY---RSACLETALISMHGRCRELEQARSVFDEM 598



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 234/503 (46%), Gaps = 17/503 (3%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           + +YT +  LQ C    D   G++ H LI  + +E  + + N LI+MY++   ++ A  +
Sbjct: 25  LQEYTAL--LQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAI 82

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLD 362
           F +M +++V+SW  L    +++    +  +LF   +L S + PN  T   +L  C    D
Sbjct: 83  FSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRD 142

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSL-----IYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           L +G  +  +    G L+ E+ T++L     I M+ +CG+ E A +VF  +  K++ +W 
Sbjct: 143 LAIGRSIHAMIWELG-LERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWT 201

Query: 418 ELLSGYCF-NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
            +   Y        D L+ F  +    +  N  TF   +  C    +      +H  + +
Sbjct: 202 AMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTW---LHSLLHE 258

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            G        ++LI  Y   G  + +   F+     + LD+ SW AM+SA V  G + +A
Sbjct: 259 AGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDA 318

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + IF  L   G +P+   L TILN+ AA G  +   +  H  + + G+  +V V +A+I 
Sbjct: 319 MAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIIS 378

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG    A   F +     DVI +NT++ A        + +  F  M LA + P++ 
Sbjct: 379 MYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKV 438

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           +F+++++ACS+   +D G  +   + ++            LV M  + G + +A+ V + 
Sbjct: 439 SFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498

Query: 713 MPFQPSPTVYRSLLSGCRIHGNK 735
           MP      V  +++ G     ++
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDR 521



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 6/282 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA +L    +  +  LG  +H  + ++G   DI ++N L+ MYS CG +   L  F
Sbjct: 637 DKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFF 696

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M  R+LVSW ++ +A  Q G     + ++  M+  G  P++    + + V        
Sbjct: 697 ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H  A +  ++ +  V   ++  YAK G +  A  +F       V   NA+IG  A
Sbjct: 757 DGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALA 816

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE---VEC 279
             G+  EA+ +   M  EG+  D  T ++ +  C      + G      +   E   +  
Sbjct: 817 QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG--CSSFLTMKEYFGISP 874

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKD-VISWNTLFG 320
           ++      +D+  ++  +++A ++  +M  +D  + W +L G
Sbjct: 875 TLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLG 916


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/699 (29%), Positives = 341/699 (48%), Gaps = 2/699 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG + K G  +D+++   ++ +Y   G      +VF+EM +RN+VSWT ++     
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE +  + +Y  M+  G   NE ++  V+  C  +     G  I    +K  +E    V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++    +G+V  A  +F  +S  D   WN++   YA  G+  E+  + S M     
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  T    L     V     GR IHGL+++   +  + + N L+ MY  +     A  
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M  KD+ISWN+L   F  +        L    I SG   N+VTF+  L  C     
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G  L  L +  G    + + ++L+ M+ + G +  +  V   +  +++  WN L+ G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSS 481
           Y  +      L  F  +   GV  N  T   V+  C    +    G+ +H  I+  GF S
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SLI  Y   G L +S +  NG +  ++ +W AM++A  H GH  E + +   + 
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G   D++     L++ A +   +  + +H   +KLGF  + ++ +A  D Y+KCG+I 
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 600

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                   S N + +  +N LI A   HG   E    F +M    ++P   TFVS+++AC
Sbjct: 601 EVVKMLPPSVNRS-LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLVDKG   +  +   +G++P+ +   C++D+L R+G L +A+  I  MP +P+  V
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +RSLL+ C+IHGN + G  A+E L  L P++D+ +VL S
Sbjct: 720 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 758



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/665 (25%), Positives = 311/665 (46%), Gaps = 45/665 (6%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK   LG Q+ G +VK G  + + ++N+LI+M    G   +   +FD+M+ER+ +SW  I
Sbjct: 156 LKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 215

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            +A  QNG  +   +++  M+      N   V +++ V   +   ++G  IH   +K+  
Sbjct: 216 AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 275

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           +    V  ++L  YA  G    A  VF  + + D+  WN+++  + + G   +AL ++ S
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  G +++  TF +AL  C     F+ GR +HGL++ S +  +  I NAL+ MY K   
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 395

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  + +V  +M  +DV++WN L GG++E+++P +  + F    + G   N++T   +L  
Sbjct: 396 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 455

Query: 357 CGKLLDLDL---GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           C  LL  DL   G  L    +  GF  +E+V +SLI M+ +CG +  +  +F+ +  +NI
Sbjct: 456 C--LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNI 513

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TWN +L+    +    +VLK    +   GV ++  +F   +    +    +   Q+HG 
Sbjct: 514 ITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL 573

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K GF    +I ++    Y   G++    +    +    + SW  ++SAL   G+  E 
Sbjct: 574 AVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEV 633

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVID 592
              FH ++E G KP      ++L +C+  G   +  + +  + +  G    +     VID
Sbjct: 634 CATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVID 693

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
              + G +                                +EA     KM    ++P+  
Sbjct: 694 LLGRSGRL--------------------------------AEAETFISKMP---MKPNDL 718

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIE 711
            + S++++C   G +D+G    K+ ++   ++P  D  Y    +M +  G  ED ++V +
Sbjct: 719 VWRSLLASCKIHGNLDRG---RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775

Query: 712 IMPFQ 716
            M F+
Sbjct: 776 QMGFK 780



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/625 (24%), Positives = 307/625 (49%), Gaps = 11/625 (1%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-EF 163
           M  RN VSW  ++S  ++ G +  G++ +  M   G  P+ F + S++  C   G+    
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H F  K  +  + +V  ++L+ Y   G V+ + +VF  +   +V  W +++ GY+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   E +++   M  EG+  ++ +    +  C L+ D  +GRQI G +++S +E  +++
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            N+LI M      +DYA  +F++M+++D ISWN++   +++N +  ++  +F        
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             N  T S LL   G +     G  +  L +  GF     V ++L+ M+   G    A+ 
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF  +  K++ +WN L++ +  +    D L   C++  SG  VN  TF   +  C   + 
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +    +HG ++ +G      I ++L+  Y   G++  S        R D+ +W A++  
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNT 582
                   +A+  F ++   G   +   + ++L++C   G   +R K +H +++  GF +
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           + +V +++I  YAKCGD+  ++  F+   ++ ++I +N ++ A AHHG   E +++  KM
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFN-GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +   +   Q +F   +SA +   ++++G  L   +  + G +     +    DM S+ G 
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGE 598

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLS 727
           + +   V++++P    P+V RSL S
Sbjct: 599 IGE---VVKMLP----PSVNRSLPS 616



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 12/431 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS+  ++  +  G  +HG +VK+GF + + + N L+ MY+  G       VF +M  ++L
Sbjct: 251 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 310

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SW  ++++ + +G     L +   M ++G   N     S +  C +    E G  +H  
Sbjct: 311 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 370

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +   +  N  +G ++++ Y K+G+++ + RV   +   DV  WNA+IGGYA      +A
Sbjct: 371 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 430

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALID 289
           L    +M  EG++ +  T ++ L  C L  D  + G+ +H  I+ +  E    + N+LI 
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  +  +F  + ++++I+WN +    + + +  +   L  K    G   +  +
Sbjct: 491 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 550

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           FS  L    KL  L+ G QL  LA+  GF  +  + ++   M+ +CG +     +     
Sbjct: 551 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 610

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +WN L+S    +    +V  TF  + E G++    TF  ++  C           
Sbjct: 611 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS---------- 660

Query: 470 IHGAIIKTGFS 480
            HG ++  G +
Sbjct: 661 -HGGLVDKGLA 670



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    ++ LS +  L     G Q+HG  VKLGF +D F+ N    MYSKCG  G  +++ 
Sbjct: 547 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VS 157
                R+L SW +++SA  ++G F+     + +M   G  P      S++  C     V 
Sbjct: 607 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 666

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGC-SVLNFYAKLGDVAAAE 200
            G + +      F L+  IE      C  V++   + G +A AE
Sbjct: 667 KGLAYYDMIARDFGLEPAIEH-----CICVIDLLGRSGRLAEAE 705


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 203/639 (31%), Positives = 322/639 (50%), Gaps = 20/639 (3%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAA 198
           G  P+ +A  +++K    +   E G  IH    K     +   V  +++N Y K GD  A
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS- 257
             +VF  IS  +   WN++I           AL     ML E +    +T ++ +  CS 
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 258 --LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
             +     +G+Q+H   +R + E +  I+N L+ MY K   +  +  +      +D+++W
Sbjct: 125 LPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           NT+     +N+   +      + +L G  P+  T S +L  C  L  L  G +L   AL 
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243

Query: 376 CGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
            G LDE + V S+L+ M+C C  V     VFD +  + I  WN +++GY  N  D + L 
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 303

Query: 435 TFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
            F  + ES G+  N  T   VV  C RS        IHG ++K G     ++ ++L+  Y
Sbjct: 304 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 363

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL------VEAGE-- 545
              G++D +       E  D+ +W  M++  V   H+ +A+ + H +      V  G   
Sbjct: 364 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 423

Query: 546 ---KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KP+   L TIL SCAA+ A  + K IH + IK    T+V V SA++D YAKCG ++ 
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 483

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +R  FDQ    N VI +N +IMAY  HG   EA+++   M +  ++P++ TF+SV +ACS
Sbjct: 484 SRKVFDQIPQKN-VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACS 542

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT-V 721
           H G+VD+G  +F  M   YG++PS D Y C+VD+L R G +++A  ++ +MP   +    
Sbjct: 543 HSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGA 602

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + SLL   RIH N E+GE A++ L+ L P   + +VLL+
Sbjct: 603 WSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 641



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 162/671 (24%), Positives = 308/671 (45%), Gaps = 26/671 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWG 98
           ++ D       L    +L+   LG Q+H H+ K G+  D + + N L+ +Y KCG FG  
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VFD ++ERN VSW  ++S+     +++M L+ +  M      P+ F + SV+  C ++
Sbjct: 66  YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125

Query: 159 GASE---FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
              E    G  +H + L+ + E N F+  +++  Y KLG +A+++ +  S    D+  WN
Sbjct: 126 PMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            ++          EAL  +  M+ EG+  D++T  + L  CS +     G+++H   +++
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244

Query: 276 EVECSISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
                 S V +AL+DMY     +    +VF+ M D+ +  WN +  G+S+N++  +   L
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 304

Query: 335 FHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           F     S G   N  T + ++  C +         +    +  G   +  V ++L+ M+ 
Sbjct: 305 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 364

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL-----------KTFCNIWES 442
           R G +++A  +F  +  +++ TWN +++GY F+    D L           K        
Sbjct: 365 RLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRV 424

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            ++ N  T   ++ +C          +IH   IK   ++   + S+L+  Y   G L  S
Sbjct: 425 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 484

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +   + ++ +W  ++ A    G+  EA+ +   ++  G KP+E    ++  +C+  
Sbjct: 485 RKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHS 544

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFD-QSFNSNDVIVY 619
           G       I  +V+K  +  E      + V+D   + G IK A    +    + N    +
Sbjct: 545 GMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 603

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMD 678
           ++L+ A   H  + E  EI  +  L  L+P+ A+ +V + +  S  GL DK   + ++M 
Sbjct: 604 SSLLGASRIHNNL-EIGEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 661

Query: 679 SQYGMQPSPDC 689
            Q G++  P C
Sbjct: 662 EQ-GVRKEPGC 671



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 238/517 (46%), Gaps = 21/517 (4%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIKSS 295
           M+  GI  D Y F   L+  + + D ++G+QIH  + +      S+++ N L+++Y K  
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
                +KVF+R+++++ +SWN+L       +        F   +     P+  T   ++ 
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 356 QCGKLL---DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            C  L     L +G Q+    L  G L+   + ++L+ M+ + G +  +  +  +   ++
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELN-SFIINTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + TWN +LS  C N    + L+    +   GVE +  T   V+  C   E  +   ++H 
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 239

Query: 473 AIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             +K G      ++ S+L+  Y N  Q+ +     +G     +  W AM++      H+ 
Sbjct: 240 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 299

Query: 532 EAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA+ +F  + E AG   +   +  ++ +C   GA+ R ++IH FV+K G + + +V + +
Sbjct: 300 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 359

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK------- 643
           +D Y++ G I  A   F +     D++ +NT+I  Y       +A+ +  KM+       
Sbjct: 360 MDMYSRLGKIDIAMRIFGK-MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 418

Query: 644 ----LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
                 +L+P+  T ++++ +C+    + KG  +  +   +  +         LVDM ++
Sbjct: 419 KGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVAVGSALVDMYAK 477

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            G L+ ++ V + +P Q +   +  ++    +HGN +
Sbjct: 478 CGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQ 513


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 186/673 (27%), Positives = 336/673 (49%), Gaps = 37/673 (5%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G     +++   +K  G + N    G V++ C      E G  +H    ++ +E + ++G
Sbjct: 35  GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S++NFY+K  DVA+AE+VF  ++  DV  W++MI  YA   +  +A +    M    I 
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            ++ TF++ L+ C+  +  + GR+IH ++    +E  +++  ALI MY K   +  A +V
Sbjct: 155 PNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEV 214

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F +M +++V+SW  +    ++++   +   L+ + + +G  PN VTF  LL  C     L
Sbjct: 215 FHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G ++       G   +  V ++LI M+C+C +V+ A  +FD +S +++ +W+ +++GY
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334

Query: 424 CFNCCD-----ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
             +         +V +    +   GV  N  TF  ++  C      +   QIH  + K G
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394

Query: 479 F--------------SSCGYI-----------------CSSLIKSYVNFGQLDNSFEFSN 507
           F              + CG I                  +S +  Y+  G L ++ +  +
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFS 454

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                ++ SW  M++     G   +   +  S+   G +PD   + TIL +C A+   +R
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K +H   +KLG  ++  VA+++I  Y+KCG +  AR  FD+  N  D + +N ++  Y 
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN-RDTVAWNAMLAGYG 573

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG   EA+++F +M    + P++ T  +V+SACS  GLV +G  +F+ M   + M P  
Sbjct: 574 QHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRK 633

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
             YGC+VD+L R G L++A+  I+ MP +P  +V+ +LL  C+ H N +L E A+  +L 
Sbjct: 634 QHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILE 693

Query: 748 LLPKNDAAHVLLS 760
           L P   + ++ LS
Sbjct: 694 LEPSYASVYITLS 706



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 166/659 (25%), Positives = 296/659 (44%), Gaps = 46/659 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  + +LG   DI+L N+LI  YSK        +VF  M  R++V+W+ +++A   
Sbjct: 75  GKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAG 134

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N         +  M      PN     S++K C +    E G  IH     + +E +  V
Sbjct: 135 NNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAV 194

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y+K G+++ A  VF+ ++  +V  W A+I   A      EA  +   ML  GI
Sbjct: 195 ATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGI 254

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           + +  TF++ L  C+     + GR+IH  I    +E  + + NALI MY K + +  A +
Sbjct: 255 SPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEARE 314

Query: 303 VFERMADKDVISWNTLFGGFSEN-----KNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           +F+RM+ +DVISW+ +  G++++     ++  +   L  +    G  PN VTF  +LR C
Sbjct: 315 IFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRAC 374

Query: 358 ---GKL--------------LDLDLGLQLQCLALH--CGFLDE----------ENVT--S 386
              G L               +LD  LQ     ++  CG + E          +NV   +
Sbjct: 375 TAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWT 434

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           S + M+ +CG +  A  VF  +  +N+ +WN +++GY  N     V +   ++   G + 
Sbjct: 435 SFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQP 494

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   ++E C      +    +H   +K G  S   + +SLI  Y   GQ+  +    
Sbjct: 495 DRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVF 554

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +     D  +W AM++     G   EAV +F  +++    P+E  L  ++++C+  G  Q
Sbjct: 555 DKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQ 614

Query: 567 RTKSIHPFV---IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN-SNDVIVYNTL 622
             + I   +    K+    + Y    ++D   + G ++ A   F QS     D+ V++ L
Sbjct: 615 EGREIFRMMQEDFKMTPRKQHY--GCMVDLLGRAGRLQEAE-EFIQSMPCEPDISVWHAL 671

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           + A   H  V  A        +  L+PS A+ ++++ +  +  G  D    + + MD +
Sbjct: 672 LGACKSHNNVQLAERA--AHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR 728



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 101/196 (51%), Gaps = 2/196 (1%)

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G  +  L   G   EA+ +   + + G   +    G ++  CA    ++  K +H  + +
Sbjct: 25  GGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDE 84

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           LG   ++Y+ +++I+ Y+K  D+  A   F +     DV+ ++++I AYA +   ++A +
Sbjct: 85  LGVEIDIYLGNSLINFYSKFEDVASAEQVF-RRMTLRDVVTWSSMIAAYAGNNHPAKAFD 143

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F++M  AN++P++ TF+S++ AC++  +++KG  +  ++    GM+        L+ M 
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH-TIVKAMGMETDVAVATALITMY 202

Query: 698 SRNGYLEDAKHVIEIM 713
           S+ G +  A  V   M
Sbjct: 203 SKCGEISVACEVFHKM 218


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 215/717 (29%), Positives = 366/717 (51%), Gaps = 17/717 (2%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           ++L  S +L    L  Q +   +K GF  D FL + ++  ++  G F    R   +    
Sbjct: 25  QALRASASLLHPPLTDQSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYP 84

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + VSW  ++S   +  +      ++  ++ +G  P+EF++ S++K C  +  +E  + + 
Sbjct: 85  DTVSWNSLISGYARFRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGV- 143

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           C  + +    N FV   +L+ YAKLGDV +AE+ F      D   W AM+ G+   G   
Sbjct: 144 CLKMGLL---NGFVVSGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFE 200

Query: 229 EALNVVSSM--LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV--ECSISIV 284
           +   V   M  L  G+ +++++  + L   S   D   G Q+ GL ++  +   CSI + 
Sbjct: 201 KGREVFVEMRGLGLGLELNEFSLTSVLGALS---DVREGEQVFGLSVKMGLLCGCSIHLN 257

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS- 343
           NAL++MY +      A K+F+ M + DV+SW    G      +  +   LF + +LSG+ 
Sbjct: 258 NALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGA---AYDAIEAFELF-RLVLSGNM 313

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             N      +L    +   L  G Q+Q L    G+L   +V ++LI+M+ +CG +  A  
Sbjct: 314 EVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARH 373

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +FD +   +  +WN L++GY  N      LK F  + +  ++ N  T   ++E    S  
Sbjct: 374 IFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNF 433

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   QIH  I+K GF     + S LI +Y     +  S    +   ++++    AM + 
Sbjct: 434 PEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAAT 493

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           LVH G + +A+ +F +     ++ D   L  +L +C A+   +  ++IH   +K G + +
Sbjct: 494 LVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQD 553

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            +V SAVID Y KCG +  A   F  + + N+++ +N ++M YA HG   E  E+F+KM 
Sbjct: 554 NFVESAVIDVYCKCGTVDEAAKTF-MNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKML 612

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              +QP + T++ V+++C H GLV++      SM   +G+ P  + Y C++D+  R G L
Sbjct: 613 ELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLL 672

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           EDAK  I+ MP  P   +++ LLSGC IHGN +LGE A++KL+ L P+ND+A+VLLS
Sbjct: 673 EDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLS 729



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 6/223 (2%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L+ +   LA  L ++ N        Q+H +IVKLGF  D  + + LI  Y KC    
Sbjct: 411 DYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMIC 470

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE---FAVGSVMK 153
              RV+ ++++ N++    + +  +  G     LK++   +T   +  E     +  V+K
Sbjct: 471 ESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLF---QTGWRLHQEVDCITLSIVLK 527

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C ++   E+G +IH  ALK  + ++ FV  +V++ Y K G V  A + F ++S +++  
Sbjct: 528 ACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVA 587

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
           WNAM+ GYA  G   E   + + ML  GI  D+ T++  L  C
Sbjct: 588 WNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSC 630


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 197/731 (26%), Positives = 366/731 (50%), Gaps = 9/731 (1%)

Query: 34  FCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC   F   DP        LS    L S + G  V+   +K GF ++ +++  +I +++K
Sbjct: 135 FCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAK 194

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
              F   LRVF ++   N+V W  I+S A++N E  + L ++  M    FMPN F   S+
Sbjct: 195 LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C ++   EFG  +  + +K    ++ FVG ++++ YAK  D+  A + F  +   +V
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNV 314

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W  +I G+        A +    M   G  ++ YT  + L  C+         Q+H  
Sbjct: 315 VSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSW 374

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQ 330
           I ++      ++ +ALI+MY K   +D + +VF  M + K++  W  +   F+++ + G+
Sbjct: 375 IFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGR 434

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLI 389
              LF + +  G RP+    S +L     ++D L LG  + C  L  G   + +V SSL 
Sbjct: 435 AVELFQRMLQEGLRPDKFCSSSVL----SIIDSLSLGRLIHCYILKIGLFTDISVGSSLF 490

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG++E +++VF+ +  K+  +W  +++G+  +      ++ F  +    +  +  
Sbjct: 491 TMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQM 550

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T    +  C    + +   ++HG  ++        +  +L+  Y   G +  +    +  
Sbjct: 551 TLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDML 610

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
            + D  S  +++S     G+  +A+ +FH +  A    D + + +++ + A + +     
Sbjct: 611 PQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGT 670

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +H  V K+G N EV V S+++  Y+KCG I      F+Q     D+I +  +I++YA H
Sbjct: 671 QLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQ-IEKPDLISWTAMIVSYAQH 729

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G  +EA++++D M+    +P   TFV V+SACSH G+V++G     SM  +YG++P    
Sbjct: 730 GKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYH 789

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L R+G L++A+  I  MP +P   ++  LL+ C++HG+ ELG  A+++++ L 
Sbjct: 790 YACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELE 849

Query: 750 PKNDAAHVLLS 760
           P    A+V LS
Sbjct: 850 PCEAGAYVTLS 860



 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/671 (26%), Positives = 325/671 (48%), Gaps = 8/671 (1%)

Query: 66  VHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +H H +K     ++ F+ N+L+  Y K       LR+FD+    N++SW +++S   QN 
Sbjct: 67  LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F+   + +  M+ +GF PN+F  GSV+  C ++G+  +G  ++  ALK     N +V  
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRA 186

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            +++ +AKL     A RVF  +  ++V CWNA+I G       + AL++   M       
Sbjct: 187 GMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMP 246

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           + +TF + L  C+ + + + GR + G +I+      + +  A+ID+Y K   MD A K F
Sbjct: 247 NSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF 306

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            RM  ++V+SW T+  GF +  +       F +    G + N+ T + +L  C + + + 
Sbjct: 307 LRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIK 366

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGY 423
             +QL       GF  + NV+S+LI M+ + G V+++  VF  + S KN+  W  ++S +
Sbjct: 367 EAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAF 426

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +      ++ F  + + G+  +      V+      ++  +   IH  I+K G  +  
Sbjct: 427 AQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSII---DSLSLGRLIHCYILKIGLFTDI 483

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + SSL   Y   G L+ S+         D  SW +M++      H  +AV +F  ++  
Sbjct: 484 SVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLE 543

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +PD+  L   L +C+A+ + ++ K +H + ++     EV V  A+++ Y+KCG I  A
Sbjct: 544 EIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLA 603

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD      D    ++L+  YA +G + +A+ +F ++++A+L     T  SV+ A + 
Sbjct: 604 RRVFDM-LPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAI 662

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
              +D G  L   + ++ G+         LV M S+ G +++   V E +  +P    + 
Sbjct: 663 LNSLDIGTQLHACV-TKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWT 720

Query: 724 SLLSGCRIHGN 734
           +++     HG 
Sbjct: 721 AMIVSYAQHGK 731



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 309/658 (46%), Gaps = 10/658 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q C   F+     F +  L+    L+    G  V G ++K G   D+F+   +I +Y+KC
Sbjct: 238 QMCCRFFMPNSFTF-SSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKC 296

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                 ++ F  M  RN+VSWT I+S  +Q  +       + +M+  G   N + + SV+
Sbjct: 297 RDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVL 356

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDV 211
             C      +    +H +  K     +  V  +++N Y+K+G V  +ERVF  + S+ ++
Sbjct: 357 TACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNL 416

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W  MI  +A  G    A+ +   ML EG+  DK+   + L   S++    +GR IH  
Sbjct: 417 AMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCY 473

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I++  +   IS+ ++L  MY K   ++ ++ VFE+M DKD +SW ++  GFSE+ +  Q 
Sbjct: 474 ILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQA 533

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LF + +L   RP+ +T +  L  C  L  L+ G ++   AL      E  V  +L+ M
Sbjct: 534 VQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNM 593

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +CGA+ +A  VFD +  K+  + + L+SGY  N    D L  F  I  + + ++  T 
Sbjct: 594 YSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTV 653

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V+       +  +  Q+H  + K G ++   + SSL+  Y   G +D   +     E+
Sbjct: 654 SSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK 713

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS- 570
            D+ SW AM+ +    G   EA+ ++  + + G KPD      +L++C+  G  +   S 
Sbjct: 714 PDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSH 773

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           ++    + G     Y  + ++D   + G +K A    +      D +++  L+ A   HG
Sbjct: 774 LNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHG 833

Query: 631 LVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +   +      ++  L+P +A  +V++ + C+  G  +   +  +S+    G++  P
Sbjct: 834 DIE--LGRLAAKRVIELEPCEAGAYVTLSNICADMGWWED-VMKIRSLMEGTGVKKEP 888


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 185/681 (27%), Positives = 345/681 (50%), Gaps = 11/681 (1%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  R++VSWT I+SA +++ + +  L M+ +M  +G  PNEF   SV++ C ++G    G
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   +K   E N  +G  +++ Y+K G +  A R+F  + + DV  W  MI      
Sbjct: 61  KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL +   M+  G+  +++TF+  L     +     G+ +H  +I   VE ++ + 
Sbjct: 121 GKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLG-LKHGKVVHAHLIVFGVELNLVVK 179

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+ MY K   MD A ++ +   + D   W  +  G ++N    +    F +   SG  
Sbjct: 180 TALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGIL 239

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG-AVEMAHS 403
            N+ T+  +L  C  +L LDLG Q+    +  G  D+  V ++L+ M+ +C   VE    
Sbjct: 240 SNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLR 299

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF+ +   ++ +W  L++G   +        ++  +  SG++ N  T   ++ +C  +++
Sbjct: 300 VFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKS 359

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
              + ++HG +IKT       + ++L+ +Y    ++D+++       + D  ++  + + 
Sbjct: 360 ASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATR 419

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L   GH+  A+ + + +     K D Y +   L++ A + + +    +H + +K G  + 
Sbjct: 420 LNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSS 479

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + V++ ++  Y KCG  + A  AF +     D++ +N LI   A +G +S A+  FD M+
Sbjct: 480 ISVSNGLVSFYGKCGLTRDAERAFAE-IREPDIVSWNGLISVLASYGHISSALSAFDDMR 538

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           L  ++P   TF+ V+  C+H GLVD G   F SM   +G++P  D Y CL D+L R G L
Sbjct: 539 LTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGRAGRL 598

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRK 763
           E+A  ++E MP +P+ ++Y++LL+ C++H    LGE  + + L L P + A +++L+   
Sbjct: 599 EEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPSDPAFNLMLA--- 655

Query: 764 RQREGNLLDHEGVCNVNDGIK 784
                NL D  G  ++   I+
Sbjct: 656 -----NLYDSSGRPDLAATIR 671



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 150/609 (24%), Positives = 272/609 (44%), Gaps = 36/609 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG ++K GF ++  L + LI +YSK G      R+F  +   ++VSWT ++S+ +Q
Sbjct: 60  GKCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQ 119

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G++   L++Y+DM   G  PNEF    V+     +G  + G  +H   +   +E N  V
Sbjct: 120 AGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGL-KHGKVVHAHLIVFGVELNLVV 178

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y+K   +  A R+       D   W A++ G A      EA+     M   GI
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK-SSGMDYAF 301
             + +T+++ L  CSL+   D+GRQIH  +I + +E  I + NAL+DMY+K S  ++   
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VFE +   DVISW +L  G SE+     +   + +   SG +PN VT SI+LR C    
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAK 358

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
                L+L    +      +  V+++L+  +     V+ A  +  N+S ++  T+  L +
Sbjct: 359 SASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLAT 418

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
                      L    +++   ++++G +    +       + +   Q+H   +K+G  S
Sbjct: 419 RLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGS 478

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + + L+  Y   G   ++          D+ SW  ++S L   GH   A++ F  + 
Sbjct: 479 SISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMR 538

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G KPD      +L +C   G           ++ +G           ++ +    ++ 
Sbjct: 539 LTGVKPDSVTFLLVLFTCTHCG-----------LVDMG-----------LEYFNSMKEMH 576

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           G     D          Y  L       G + EAMEI + M    ++P+ + + ++++AC
Sbjct: 577 GIEPQLDH---------YVCLFDLLGRAGRLEEAMEILETMP---IRPNASIYKTLLAAC 624

Query: 662 SHKGLVDKG 670
               +V  G
Sbjct: 625 KVHRIVPLG 633



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 169/364 (46%), Gaps = 3/364 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY-FGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG Q+H  ++  G  +DI + N L+ MY KC +    GLRVF+ +   +++SWT +++  
Sbjct: 260 LGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGLRVFEGIESPDVISWTSLIAGL 319

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            ++G        Y++M  +G  PN   +  +++ C +  ++     +H   +K   + + 
Sbjct: 320 SEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDI 379

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  ++++ YA    V  A  +  ++S  D   +  +       G+   AL+V++ M  +
Sbjct: 380 AVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFND 439

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I MD Y+    L   + +   + G Q+H   ++S +  SIS+ N L+  Y K      A
Sbjct: 440 DIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDA 499

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            + F  + + D++SWN L    +   +     S F    L+G +P+ VTF ++L  C   
Sbjct: 500 ERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHC 559

Query: 361 LDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNE 418
             +D+GL+    +    G   + +    L  +  R G +E A  + + +  + N + +  
Sbjct: 560 GLVDMGLEYFNSMKEMHGIEPQLDHYVCLFDLLGRAGRLEEAMEILETMPIRPNASIYKT 619

Query: 419 LLSG 422
           LL+ 
Sbjct: 620 LLAA 623



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 13/277 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+ + + L+  L      KS     ++HGH++K    +DI + N L+  Y+       
Sbjct: 338 SGLQPNSVTLSIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDD 397

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +   M++R+ +++T + +   Q G  +M L +   M  +    + +++   +     
Sbjct: 398 AWHLIRNMSQRDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAG 457

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + + E G  +H +++K  +  +  V   +++FY K G    AER F  I   D+  WN +
Sbjct: 458 LNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGL 517

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHG 270
           I   A  G+   AL+    M   G+  D  TF+  L  C+     D+G       +++HG
Sbjct: 518 ISVLASYGHISSALSAFDDMRLTGVKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHG 577

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
                 +E  +     L D+  ++  ++ A ++ E M
Sbjct: 578 ------IEPQLDHYVCLFDLLGRAGRLEEAMEILETM 608



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 2/134 (1%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           N+ F  D  ++ D   +A  LS S  L S   G Q+H + VK G  + I + N L++ Y 
Sbjct: 434 NHMFNDD--IKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKSGLGSSISVSNGLVSFYG 491

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG      R F E+ E ++VSW  ++S     G     L  + DM+  G  P+      
Sbjct: 492 KCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHISSALSAFDDMRLTGVKPDSVTFLL 551

Query: 151 VMKVCVSMGASEFG 164
           V+  C   G  + G
Sbjct: 552 VLFTCTHCGLVDMG 565


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 171/532 (32%), Positives = 293/532 (55%), Gaps = 1/532 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL ++++M+ +G  +    F   LQ C+ +   + GR++H  I++S ++ +  + N L+
Sbjct: 79  EALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 138

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  A +VF+ + D++++SW  +   F       +    +    L+G +P+ V
Sbjct: 139 SMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKV 198

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  LL        L +G ++       G   E  V +SL+ M+ +CG +  A  +FD +
Sbjct: 199 TFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKL 258

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             KN+ TW  L++GY         L+    + ++ V  N  T+  +++ C      +   
Sbjct: 259 PEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGK 318

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++H  II++G+    ++ ++LI  Y   G L  + +        D+ +W AM++     G
Sbjct: 319 KVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLG 378

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
            + EA+ +F  + + G KPD+    + L SC++    Q  KSIH  ++  G++ +VY+ S
Sbjct: 379 FHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQS 438

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++  YAKCG +  AR+ F+Q  +  +V+ +  +I   A HG   EA+E F++MK   ++
Sbjct: 439 ALVSMYAKCGSMDDARLVFNQ-MSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P + TF SV+SAC+H GLV++G   F+SM   YG++P  + Y C VD+L R G+LE+A++
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           VI  MPFQP P+V+ +LLS CRIH + E GE A+E +L L P +D A+V LS
Sbjct: 558 VILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALS 609



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 255/545 (46%), Gaps = 45/545 (8%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            L+S   G +VH  I+K G   + +L+N L++MY+KCG      RVFD + +RN+VSWT 
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTA 167

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++ A +   +     K Y  MK  G  P++    S++    +    + G  +H    K  
Sbjct: 168 MIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG 227

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E  P VG S++  YAK GD++ A+ +F  +   +V  W  +I GYA  G    AL ++ 
Sbjct: 228 LELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLE 287

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M    +  +K T+ + LQGC+     + G+++H  II+S     I +VNALI MY K  
Sbjct: 288 KMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCG 347

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+  A K+F  +  +DV++W  +  G+++     +   LF +    G +P+ +TF+  L 
Sbjct: 348 GLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALT 407

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C     L  G  +    +H G+  +  + S+L+ M+ +CG+++ A  VF+ +S +N+  
Sbjct: 408 SCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVA 467

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           W  +++G   +    + L+ F  + + G++ +  TF  V+  C            H  ++
Sbjct: 468 WTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSAC-----------THVGLV 516

Query: 476 KTG---FSS--CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM--------ASWGAMMS 522
           + G   F S    Y    +++ Y  F  L         AE + +        + WGA++S
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILG----------TILNSCAAIGAYQRTKSIH 572
           A              HS VE GE+  E +L            + N  AA G Y+  + + 
Sbjct: 577 ACR-----------IHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVR 625

Query: 573 PFVIK 577
             + K
Sbjct: 626 QVMEK 630



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/565 (23%), Positives = 257/565 (45%), Gaps = 40/565 (7%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C  + + E G  +H   LK  I+ N ++  ++L+ YAK G +  A RVF  I   +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           +  W AMI  +       EA     +M   G   DK TF++ L   +      +G+++H 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I ++ +E    +  +L+ MY K   +  A  +F+++ +K+V++W  L  G+++      
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              L  K   +   PN +T++ +L+ C   L L+ G ++    +  G+  E  V ++LI 
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+C+CG ++ A  +F ++ ++++ TW  +++GY       + +  F  + + G++ +  T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F   + +C      Q    IH  ++  G+S   Y+ S+L+  Y   G +D++    N   
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TK 569
             ++ +W AM++     G   EA+  F  + + G KPD+    ++L++C  +G  +   K
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 521

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
                 +  G    V   S  +D   + G ++ A           +VI    L M +   
Sbjct: 522 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA----------ENVI----LTMPF--- 564

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD- 688
                             QP  + + +++SAC     V++G    ++ ++   + P  D 
Sbjct: 565 ------------------QPGPSVWGALLSACRIHSDVERG---ERAAENVLKLDPDDDG 603

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIM 713
            Y  L ++ +  G  EDA+ V ++M
Sbjct: 604 AYVALSNIYAAAGRYEDAEKVRQVM 628



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 192/384 (50%), Gaps = 2/384 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D +     L+   N +   +G +VH  I K G   +  +  +L+ MY+KCG       
Sbjct: 194 KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQV 253

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD++ E+N+V+WTL+++   Q G+ D+ L++   M+     PN+    S+++ C +  A
Sbjct: 254 IFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLA 313

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +H + ++    +  +V  +++  Y K G +  A ++F  +   DV  W AM+ G
Sbjct: 314 LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA  G+  EA+++   M  +GI  DK TF +AL  CS  A    G+ IH  ++ +     
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD 433

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + +AL+ MY K   MD A  VF +M++++V++W  +  G +++    +    F +   
Sbjct: 434 VYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKK 493

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G +P+ VTF+ +L  C  +  ++ G +  + + L  G        S  + +  R G +E
Sbjct: 494 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 553

Query: 400 MAHSVFDNVSYK-NITTWNELLSG 422
            A +V   + ++   + W  LLS 
Sbjct: 554 EAENVILTMPFQPGPSVWGALLSA 577



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/275 (22%), Positives = 129/275 (46%), Gaps = 22/275 (8%)

Query: 499 LDNSFEFSN------------GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +D +FE +             G  ++D  +    +S L  QG   EA+ I ++++  G +
Sbjct: 34  VDTAFELTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTR 93

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
               +   +L  CA + + ++ + +H  ++K G     Y+ + ++  YAKCG +  AR  
Sbjct: 94  VYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRV 153

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           FD      +++ +  +I A+       EA + ++ MKLA  +P + TFVS+++A ++  L
Sbjct: 154 FD-GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPEL 212

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           +  G  +   + ++ G++  P     LV M ++ G +  A+ + + +P + +   +  L+
Sbjct: 213 LQVGQKVHMEI-AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLI 270

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           +G    G  ++        L LL K   A V  +K
Sbjct: 271 AGYAQQGQVDVA-------LELLEKMQQAEVAPNK 298


>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 885

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 189/610 (30%), Positives = 317/610 (51%), Gaps = 5/610 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GT +HG+++K G   D  L  +LI +Y+KCG   +  +V   M ER++VSWT +++  + 
Sbjct: 112 GTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERDVVSWTALIAGYVS 171

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G    G+K Y +M+     PNEF + +V+K        +FG  IH  A+K  +  + FV
Sbjct: 172 EGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFV 231

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ YAK G++  A+RVF+ +   +   WNA++ GYA  G G   L +   ML   +
Sbjct: 232 GSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEM 291

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY-AF 301
               YT    L+GC+   +   G+ +H L IR   E    +   L+DMY K  GM Y A 
Sbjct: 292 NFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSK-CGMAYEAL 350

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF  + + D+++W+ +  G  +  +  + A LFH     G RPN  +F+ ++     + 
Sbjct: 351 KVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVG 410

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL LG  + C     G+  + +V ++LI M+ + G V+    VFD ++ +++ +WN LLS
Sbjct: 411 DLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLS 470

Query: 422 G-YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           G Y F   D   L+ FC +   G+  N  TF  V+ +C    N     Q+H  IIK    
Sbjct: 471 GFYDFETSDQG-LRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLD 529

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ ++LI  Y     L+++    N     D+ +W  +++         +AV     +
Sbjct: 530 GNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQM 589

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +  G KP+E+ L + L+ C+ +      + +H   IK G + +V+V+SA++D Y KCG +
Sbjct: 590 LREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCM 649

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A   F   F S D + +NT+I  Y+ HG   +A+E F  M   ++ P + TF+ V++A
Sbjct: 650 EDAEAIFKGLF-SRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAA 708

Query: 661 CSHKGLVDKG 670
           CS+ G V++G
Sbjct: 709 CSYMGWVEEG 718



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 259/546 (47%), Gaps = 5/546 (0%)

Query: 29  CGNNQFCSDSFLRKDPI-----FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           CG++   +   +RK+ I      LA  L  S        G  +H   +K G   D+F+ +
Sbjct: 174 CGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGS 233

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            L+ +Y+K G      RVF  M E+N VSW  +++   Q G+    LK++  M       
Sbjct: 234 ALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNF 293

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
             + + +V+K C + G    G ++H  +++   E + F+GC++++ Y+K G    A +VF
Sbjct: 294 TNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVDMYSKCGMAYEALKVF 353

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             I   D+  W+A+I G    G+  EA  +   M  +G+  ++++F + +   + V D  
Sbjct: 354 NMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVGDLY 413

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           +G+ IH  I +   E   S+ NALI MY+KS  +    +VF+ M ++D++SWN L  GF 
Sbjct: 414 LGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFY 473

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           + +   Q   +F + ++ G  PN  TF  +LR C  LL++  G Q+    +       + 
Sbjct: 474 DFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDF 533

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++LI M+ +   +E A   F+ ++ +++ TW  +++G+         +K    +   G
Sbjct: 534 VGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREG 593

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           ++ N  T    +  C R        Q+H   IK+G S   ++ S+L+  Y   G ++++ 
Sbjct: 594 IKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAE 653

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
               G    D  +W  ++      G   +A+  F  +++    PDE     +L +C+ +G
Sbjct: 654 AIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDIDPDEVTFIGVLAACSYMG 713

Query: 564 AYQRTK 569
             +  K
Sbjct: 714 WVEEGK 719



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 282/602 (46%), Gaps = 6/602 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C S G    G +IH   +K  +E +  +  S++N YAK G +A A +V   +   D
Sbjct: 99  MLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERD 158

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A+I GY   G G + +     M  E I  +++T    L+  S+ +D   G+ IH 
Sbjct: 159 VVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHL 218

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I++ +   + + +AL+D+Y K   M+ A +VF  M +K+ +SWN L  G+++  +   
Sbjct: 219 EAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKN 278

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              LF + +       + T S +L+ C    +L  G  L  L++   +  +E +  +L+ 
Sbjct: 279 VLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCNLVD 338

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG    A  VF+ +   +I  W+ +++G        +  + F  + + GV  N  +
Sbjct: 339 MYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFS 398

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  V+       +  +   IH  I K G+ S   + ++LI  Y+  G + +     +   
Sbjct: 399 FASVISAATNVGDLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMT 458

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW A++S       + + + IF  ++  G  P+ Y    +L SC+++      K 
Sbjct: 459 NRDLVSWNALLSGFYDFETSDQGLRIFCQMLMEGLVPNLYTFVGVLRSCSSLLNVWFGKQ 518

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  +IK   +   +V +A+ID YAK   ++ A +AF++  N  D+  +  +I  ++   
Sbjct: 519 VHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTN-RDLFTWTVIIAGHSQTD 577

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +A++   +M    ++P++ T  S +S CS    +  G  L  S+  + G        
Sbjct: 578 KAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQL-HSLAIKSGHSGDVFVS 636

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
             LVDM  + G +EDA+ + + + F      + +++ G   HG    G+ A E   ++L 
Sbjct: 637 SALVDMYGKCGCMEDAEAIFKGL-FSRDTVAWNTIICGYSQHGQ---GQKALEAFRMMLD 692

Query: 751 KN 752
           ++
Sbjct: 693 ED 694



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 179/383 (46%), Gaps = 11/383 (2%)

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +S +LR+C    +L+ G  +    +  G   + ++  SLI ++ +CG++  A  V   + 
Sbjct: 96  YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +W  L++GY    C +D +K +C + +  +  N  T   V++      + +    
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENICPNEFTLATVLKASSMCSDIKFGKL 215

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   IKTG     ++ S+L+  Y  FG+++ +     G    +  SW A+++    +G 
Sbjct: 216 IHLEAIKTGLLLDLFVGSALVDLYAKFGEMELADRVFFGMPEKNNVSWNALLNGYAQRGD 275

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
               + +F  ++E       Y L T+L  CA  G  +  K++H   I+  +  + ++   
Sbjct: 276 GKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLSIRRAYELDEFLGCN 335

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KCG    A   F+      D++ ++ +I      G   EA E+F  M+   ++P
Sbjct: 336 LVDMYSKCGMAYEALKVFNM-IEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRP 394

Query: 650 SQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
           +Q +F SV+SA ++ G +  G    C + K     YG +        L+ M  ++G+++D
Sbjct: 395 NQFSFASVISAATNVGDLYLGQSIHCCICK-----YGYESDNSVGNALITMYMKSGFVQD 449

Query: 706 AKHVIEIMPFQPSPTVYRSLLSG 728
              V + M        + +LLSG
Sbjct: 450 GIRVFDTMT-NRDLVSWNALLSG 471



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 111/233 (47%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVH HI+K     + F+   LI MY+K          F+++  R+L +WT+I++   
Sbjct: 515 FGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDADVAFNKLTNRDLFTWTVIIAGHS 574

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q  + +  +K    M   G  PNEF + S +  C  M     G  +H  A+K     + F
Sbjct: 575 QTDKAEKAVKYLGQMLREGIKPNEFTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVF 634

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ Y K G +  AE +F  + S D   WN +I GY+  G G +AL     ML E 
Sbjct: 635 VSSALVDMYGKCGCMEDAEAIFKGLFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDED 694

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           I  D+ TFI  L  CS +   + G++   L+ +S     +S +    D+ I +
Sbjct: 695 IDPDEVTFIGVLAACSYMGWVEEGKKHFDLMSKSLCSEQLSQLETSWDILIDA 747


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 212/723 (29%), Positives = 362/723 (50%), Gaps = 42/723 (5%)

Query: 40   LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            L+ +    A  + L   +K   +G  +HG +VK GF++D FL   LI+MY+  G      
Sbjct: 442  LKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIAR 501

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             +FD  AE+N+V W  ++SA  QN +     KM+  M      PN     S++  C +  
Sbjct: 502  DLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSA 561

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                G S+H   +K R++    V  ++L+ YAKLGD  +A  +FY +        ++MI 
Sbjct: 562  NFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRK-TSYRDSMIS 620

Query: 220  GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS--EV 277
            GY     G                                  F   R +  L I++  E 
Sbjct: 621  GYGIMSMG--------------------------------RPFFWVRLLMHLAIKTGKEF 648

Query: 278  ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
            +  ++I NAL+  Y     +  +FK+F++M  ++ ISWNTL  G   N +  +  +L HK
Sbjct: 649  DSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHK 708

Query: 338  FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                    + VT   ++  C    +L  G+ L   A+  GF  + ++ ++LI M+  CG 
Sbjct: 709  MQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGD 768

Query: 398  VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
            +     +F+ + +++I +WN L++GY F+    +V+ +FC +   G + N  T   ++ +
Sbjct: 769  INAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPS 828

Query: 458  CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMAS 516
            C      +    IH   ++TG      I +SLI  Y  F  +++  F F  G +  D+A 
Sbjct: 829  CXTLLQGK---SIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE-DIAL 884

Query: 517  WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
            W A+MS  V   +  E+VT F  L+ A  +PD     +++++C  + +   + S+  +VI
Sbjct: 885  WNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVI 944

Query: 577  KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
            + GF+  + +++A+ID +A+CG+I  A+  F +  +S D + ++T+I  Y  HG    A+
Sbjct: 945  QKGFDKHIVISNALIDLFARCGNISIAKKIF-EGLSSKDAVSWSTMINGYGLHGDSEAAL 1003

Query: 637  EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
             +  +M+L+ ++P   T+ SV+SACSH G +D+G ++F SM  + G+    + Y C+VD+
Sbjct: 1004 ALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDL 1062

Query: 697  LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
            L R G L +A   +E +P +PS ++  SLL  C IHGN +LGE     L  L PKN  ++
Sbjct: 1063 LGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSGSY 1122

Query: 757  VLL 759
            V+L
Sbjct: 1123 VML 1125



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 142/566 (25%), Positives = 262/566 (46%), Gaps = 36/566 (6%)

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L  F+ + + ++    L++     +G F+  L +Y+  +  G   ++F    V+K C +
Sbjct: 298 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSA 357

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +GA      +HC  L+   E+N  +  ++++FYAK G +  A  V   IS  D+  WNA+
Sbjct: 358 LGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNAL 417

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY+  G+  E   V+  +L  G+  +  TF + +  C+ +   DIG+ IHG +++S  
Sbjct: 418 ISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGF 477

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                +  ALI MY     +  A  +F+  A+K+V+ WN++   +++N+   +   +F +
Sbjct: 478 SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQ 537

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            + +  +PN VTF  ++  C    +   G  L    +      + +V ++L+ M+ + G 
Sbjct: 538 MLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGD 597

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
              A  +F  +  K  +  + ++SGY                   G+   G  FF+V   
Sbjct: 598 XNSAXFIFYQMPRKT-SYRDSMISGY-------------------GIMSMGRPFFWVRLL 637

Query: 458 CCRSENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                       +H A IKTG  F S   I ++L+  Y + G+L +SF+        +  
Sbjct: 638 ------------MHLA-IKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAI 684

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  ++S  VH G   +AV + H + +   + D   L +I+  C       +  ++H + 
Sbjct: 685 SWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYA 744

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           IK GF  +V + +A+I  Y  CGDI   +  F +      ++ +N LI  Y  H L +E 
Sbjct: 745 IKTGFACDVSLVNALISMYFNCGDINAGKFLF-EVMPWRSIVSWNALITGYRFHYLQNEV 803

Query: 636 MEIFDKMKLANLQPSQATFVSVMSAC 661
           M  F +M     +P+  T ++++ +C
Sbjct: 804 MASFCQMIXEGQKPNYVTLLNLLPSC 829



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 164/682 (24%), Positives = 310/682 (45%), Gaps = 59/682 (8%)

Query: 66   VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            VH  +++  F  ++ +Q  L+  Y+K G       V D++++ +LV+W  ++S    NG 
Sbjct: 367  VHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNG- 425

Query: 126  FDMG----LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            FD      L+  ++M   G  PN     S++ +C  M   + G SIH F +K     + F
Sbjct: 426  FDKEVFEVLRQILEM---GLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEF 482

Query: 182  VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            +  ++++ YA  G++  A  +F S +  +V  WN+MI  YA      EA  +   ML   
Sbjct: 483  LTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKAN 542

Query: 242  ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            +  +  TF++ +  C   A+F  G+ +H  +++  ++  +S+  AL+ MY K    + A 
Sbjct: 543  MQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAX 602

Query: 302  KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             +F +M  K     +++  G+                I+S  RP    F + L       
Sbjct: 603  FIFYQMPRKTSYR-DSMISGYG---------------IMSMGRP---FFWVRL------- 636

Query: 362  DLDLGLQLQCLALHCG--FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                   L  LA+  G  F    N++++L+  +  CG +  +  +F  +  +N  +WN L
Sbjct: 637  -------LMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTL 689

Query: 420  LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
            +SG   N      +     + +  +E++  T   ++  C   EN      +HG  IKTGF
Sbjct: 690  ISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGF 749

Query: 480  SSCGYICSSLIKSYVNFGQLD-NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            +    + ++LI  Y N G ++   F F     R  + SW A+++        +E +  F 
Sbjct: 750  ACDVSLVNALISMYFNCGDINAGKFLFEVMPWR-SIVSWNALITGYRFHYLQNEVMASFC 808

Query: 539  SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
             ++  G+KP+   L  +L SC  +    + KSIH F ++ G   E  + +++I  YA+  
Sbjct: 809  QMIXEGQKPNYVTLLNLLPSCXTL---LQGKSIHAFAVRTGVIVETPIITSLISMYARFE 865

Query: 599  DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +I      F+      D+ ++N ++  Y       E++  F ++  A ++P   TF+S++
Sbjct: 866  NINSFIFLFEMG-GKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLI 924

Query: 659  SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVDMLSRNGYLEDAKHVIEIMP 714
            SAC     V    L   +    Y +Q   D +      L+D+ +R G +  AK + E + 
Sbjct: 925  SAC-----VQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLS 979

Query: 715  FQPSPTVYRSLLSGCRIHGNKE 736
             + + + + ++++G  +HG+ E
Sbjct: 980  SKDAVS-WSTMINGYGLHGDSE 1000



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/542 (23%), Positives = 232/542 (42%), Gaps = 38/542 (7%)

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
           LG    A   F +I    V   N MI      G   + L V       G   D +TF   
Sbjct: 292 LGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFV 351

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           ++ CS +    I   +H +++R+  E ++ I  AL+D Y K+  M  A  V ++++  D+
Sbjct: 352 IKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDL 411

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ++WN L  G+S N    +   +  + +  G +PN  TF+ ++  C ++  LD+G  +   
Sbjct: 412 VTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGF 471

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  GF  +E +T +LI M+   G + +A  +FD+ + KN+  WN ++S Y  N   ++ 
Sbjct: 472 VVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEA 531

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
            K F  + ++ ++ N  TF  ++  C  S N      +H  ++K    S   + ++L+  
Sbjct: 532 FKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSM 591

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G  ++                               A  IF+ +       D  I 
Sbjct: 592 YAKLGDXNS-------------------------------AXFIFYQMPRKTSYRDSMIS 620

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           G  + S      + R   +    IK G  F++ + +++A++  Y+ CG +  +   F Q 
Sbjct: 621 GYGIMSMGRPFFWVRL--LMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLF-QK 677

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
               + I +NTLI    H+G   +A+ +  KM+   ++    T +S++  C     + +G
Sbjct: 678 MPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQG 737

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
             L      + G          L+ M    G +   K + E+MP++ S   + +L++G R
Sbjct: 738 MTL-HGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWR-SIVSWNALITGYR 795

Query: 731 IH 732
            H
Sbjct: 796 FH 797



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 181/392 (46%), Gaps = 15/392 (3%)

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           + S P   +F  L   C  + +L     L  + +    + +E V +  I      GA E+
Sbjct: 241 NSSNPKVTSFLRLFDLCRNIENLK---PLGSVLIVRDLMRDEYVVAEFIISCFHLGAPEL 297

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A S F+ +   ++   N ++   C +    DVL  +      G   +  TF +V++ C  
Sbjct: 298 ALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSA 357

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                +   +H  +++T F     I ++L+  Y   G++  +    +   + D+ +W A+
Sbjct: 358 LGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNAL 417

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G + E   +   ++E G KP+     +I+  C  +      KSIH FV+K GF
Sbjct: 418 ISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGF 477

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           +++ ++  A+I  YA  G++  AR  FD +   N V+++N++I AYA +   SEA ++F 
Sbjct: 478 SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKN-VVIWNSMISAYAQNQKSSEAFKMFQ 536

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDML 697
           +M  AN+QP+  TFVS++  C +      G    KS+ +   +Y +         L+ M 
Sbjct: 537 QMLKANMQPNVVTFVSIIPCCENSANFWXG----KSLHAHVMKYRLDSQLSVATALLSMY 592

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYR-SLLSG 728
           ++ G    A  +   M   P  T YR S++SG
Sbjct: 593 AKLGDXNSAXFIFYQM---PRKTSYRDSMISG 621



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 119/267 (44%), Gaps = 8/267 (2%)

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F+   +  + T N  L+  C    D + +K       S  +V   +F  + + C   EN
Sbjct: 207 MFEIFLHSALHTSNTFLTLKC--TADGEFIKNTSKHNSSNPKVT--SFLRLFDLCRNIEN 262

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            + +G +   +I        Y+ +  I S  + G  + +       E+  +     M+  
Sbjct: 263 LKPLGSV---LIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRR 319

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L   G   + + ++      G   D++    ++ +C+A+GA    + +H  V++  F   
Sbjct: 320 LCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEEN 379

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + + +A++D YAK G +  AR+  D+  +  D++ +N LI  Y+ +G   E  E+  ++ 
Sbjct: 380 LVIQTALVDFYAKTGRMVKARLVLDK-ISQPDLVTWNALISGYSLNGFDKEVFEVLRQIL 438

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKG 670
              L+P+ +TF S++  C+    +D G
Sbjct: 439 EMGLKPNVSTFASIIPLCTRMKCLDIG 465


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 177/601 (29%), Positives = 319/601 (53%), Gaps = 4/601 (0%)

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGY 221
            G  IH   + + ++ N  +  S++N Y       +A+ VF +I +  D+  WN ++   
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272

Query: 222 AHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
                  E L V   +L F  +  D +T+ + L+ CS +     G+ +H  +I+S     
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMD 332

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + ++++ + MY K +  + A K+F+ M ++DV SWN +   + ++  P +   LF +  +
Sbjct: 333 VVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKV 392

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           SG +P+ VT + ++  C +LLDL+ G ++    +  GF  +  V+S+L+ M+ +CG +EM
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 452

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF+ +  KN+ +WN +++GY         ++ F  + E G+     T   ++  C R
Sbjct: 453 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 512

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S N Q+   IHG II+    +  ++ SSLI  Y   G + ++        + ++ SW  M
Sbjct: 513 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 572

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S  V  G   EA+ IF  + +AG KPD     ++L +C+ +   ++ K IH F+I+   
Sbjct: 573 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
                V  A++D YAKCG +  A   F+Q     D + + ++I AY  HG   EA+++F+
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQ-LPERDFVSWTSMIAAYGSHGQAFEALKLFE 691

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM+ ++ +P + TF++++SACSH GLVD+GC  F  M ++YG +P+ + Y CL+D+L R 
Sbjct: 692 KMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRV 751

Query: 701 GYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           G L +A  +++  P  +    +  +L S C +H   +LGE     L+   P + + +++L
Sbjct: 752 GRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIIL 811

Query: 760 S 760
           S
Sbjct: 812 S 812



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 266/570 (46%), Gaps = 4/570 (0%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVS 118
            +LG  +H  IV LG  N+I L  +LI +Y  C  F     VF  +    ++  W  +++
Sbjct: 211 ELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA 270

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           A  +N  F  GL+++  +    ++ P+ F   SV+K C  +G   +G  +H   +K    
Sbjct: 271 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 330

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V  S +  YAK      A ++F  +   DV  WN +I  Y   G   +AL +   M
Sbjct: 331 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G   D  T    +  C+ + D + G++IH  ++RS       + +AL+DMY K   +
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 450

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A +VFE++  K+V+SWN++  G+S   +      LF +    G RP   T S +L  C
Sbjct: 451 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 510

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            + ++L LG  +    +      +  V SSLI ++ +CG +  A +VF N+   N+ +WN
Sbjct: 511 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWN 570

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++SGY       + L  F ++ ++GV+ +  TF  V+  C +    +   +IH  II++
Sbjct: 571 VMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIES 630

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                  +  +L+  Y   G +D +    N     D  SW +M++A    G   EA+ +F
Sbjct: 631 KLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLF 690

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
             + ++  KPD+     IL++C+  G         +  + + GF   V   S +ID   +
Sbjct: 691 EKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGR 750

Query: 597 CGDIKGARMAFDQSFN-SNDVIVYNTLIMA 625
            G ++ A     ++ +   DV + +TL  A
Sbjct: 751 VGRLREAYEILQRTPDIREDVGLLSTLFSA 780



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 262/552 (47%), Gaps = 16/552 (2%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L+ D       L     L     G  VH H++K GF  D+ + ++ + MY+KC  F   
Sbjct: 293 YLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDA 352

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +++FDEM ER++ SW  ++S   Q+G+ +  L+++ +MK +GF P+   + +V+  C  +
Sbjct: 353 IKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARL 412

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              E G  IH   ++     + FV  ++++ Y K G +  A+ VF  I   +V  WN+MI
Sbjct: 413 LDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMI 472

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY+  G     + +   M  EGI     T  + L  CS   +  +G+ IHG IIR+ VE
Sbjct: 473 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 532

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             I + ++LID+Y K   +  A  VF+ M   +V+SWN +  G+ +  +  +   +F   
Sbjct: 533 ADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDM 592

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             +G +P+ +TF+ +L  C +L  L+ G ++    +       E V  +L+ M+ +CGAV
Sbjct: 593 RKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAV 652

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  +F+ +  ++  +W  +++ Y  +    + LK F  + +S  + +  TF  ++  C
Sbjct: 653 DEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSAC 712

Query: 459 CRS----ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
             +    E      Q+   I + GF       S LI      G+L  ++E        D+
Sbjct: 713 SHAGLVDEGCYYFNQM---IAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTP--DI 767

Query: 515 ASWGAMMSALVHQGHNHEAV----TIFHSLVEA-GEKPDEYILGTILNSCAAIGAYQRTK 569
                ++S L    H H+ +     I   L+E   + P  YI+  + N  A++  +   +
Sbjct: 768 REDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYII--LSNMYASVKKWDEVR 825

Query: 570 SIHPFVIKLGFN 581
            +   + +LG  
Sbjct: 826 KVRLKIKELGLK 837



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 181/371 (48%), Gaps = 1/371 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S  + D + L   +S    L     G ++H  +V+ GF  D F+ + L+ MY KCG    
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 452

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+++  +N+VSW  +++     G+    ++++  M   G  P    + S++  C  
Sbjct: 453 AKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSR 512

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
               + G  IH + ++ R+E + FV  S+++ Y K G++ +AE VF ++   +V  WN M
Sbjct: 513 SVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVM 572

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY   G   EAL + + M   G+  D  TF + L  CS +A  + G++IH  II S++
Sbjct: 573 ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKL 632

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E +  ++ AL+DMY K   +D A  +F ++ ++D +SW ++   +  +    +   LF K
Sbjct: 633 EINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEK 692

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
              S ++P+ VTF  +L  C     +D G      +    GF       S LI +  R G
Sbjct: 693 MQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVG 752

Query: 397 AVEMAHSVFDN 407
            +  A+ +   
Sbjct: 753 RLREAYEILQR 763


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 205/708 (28%), Positives = 353/708 (49%), Gaps = 11/708 (1%)

Query: 62  LGTQVHGHIVKLGFTND---IFLQNNLIAMYSKCGYFGWGLRVFDEM---AERNLVSWTL 115
           LG Q+H   V  G  +D   + L   L+ MY     F   + VF  +   A  + + W  
Sbjct: 50  LGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNW 109

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA--VGSVMKVCVSMGASEFGYSIHCFALK 173
           ++      G+  + +  YV M ++   P+  A  +  V+K C ++GA   G  +H  A  
Sbjct: 110 LIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARA 169

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           I +  + +VG +++  YA  G +  A   F  I   D   WN M+ G    G    A+ +
Sbjct: 170 IGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRL 229

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             +M   G   +  T    L  C+  AD   G Q+H L ++  +E  +++ N L+ MY K
Sbjct: 230 FRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAK 289

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +D A+++FE M   D+++WN +  G  +N    +   LF+    SG+RP+ +T   L
Sbjct: 290 CQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSL 349

Query: 354 LRQCGKLLDLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L     L  L  G ++   +  +C  +D   + S+L+ ++ +C  V MA +++D     +
Sbjct: 350 LPALTDLNGLKQGKEVHGYIVRNCVNMDV-FLVSALVDIYFKCRDVRMAQNLYDAARAID 408

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +   + ++SGY  N    + L+ F  + E  ++ N  T   V+  C       +  QIHG
Sbjct: 409 VVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHG 468

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +++  +    Y+ S+L+  Y   G+LD S        + D  +W +M+S+    G   E
Sbjct: 469 YVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQE 528

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ +F  +   G K +   +   L++CA++ A    K IH   IK     +++  SA+ID
Sbjct: 529 ALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALID 588

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG+++ A   F+   + N+V  +N++I AY  HGLV E++ +   M+    +P   
Sbjct: 589 MYAKCGNLELALRVFEFMPDKNEV-SWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHV 647

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF++++SAC+H GLV++G  LF+ M  +Y + P  + + C+VD+ SR+G L+ A   I  
Sbjct: 648 TFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIAD 707

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MPF+P   ++ +LL  CR+H N EL + AS++L  L P N   +VL+S
Sbjct: 708 MPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMS 755



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I L   L    +L     G +VHG+IV+     D+FL + L+ +Y KC        
Sbjct: 340 RPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQN 399

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           ++D     ++V  + ++S  + NG  +  L+M+  +      PN   + SV+  C SM A
Sbjct: 400 LYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAA 459

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  IH + L+   E+  +V  ++++ YAK G +  +  +F  +S  D   WN+MI  
Sbjct: 460 LPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISS 519

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           ++  G   EAL++   M  EGI  +  T   AL  C+ +     G++IHG+ I+  ++  
Sbjct: 520 FSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKAD 579

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I   +ALIDMY K   ++ A +VFE M DK+ +SWN++   +  +    ++ SL H    
Sbjct: 580 IFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQE 639

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G +P+HVTF  L+  C     ++ G+QL QC+             + ++ ++ R G ++
Sbjct: 640 EGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLD 699

Query: 400 MAHSVFDNVSYK-NITTWNELL 420
            A     ++ +K +   W  LL
Sbjct: 700 KAIQFIADMPFKPDAGIWGALL 721



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 141/290 (48%), Gaps = 2/290 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +A  L    ++ +  LG Q+HG++++  +    ++++ L+ MY+KCG      
Sbjct: 440 IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSH 499

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +M++++ V+W  ++S+  QNG+    L ++  M   G   N   + + +  C S+ 
Sbjct: 500 YIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLP 559

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A  +G  IH   +K  I+ + F   ++++ YAK G++  A RVF  +   +   WN++I 
Sbjct: 560 AIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIIS 619

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VE 278
            Y   G   E+++++  M  EG   D  TF+  +  C+     + G Q+   + +   + 
Sbjct: 620 AYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIA 679

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
             +     ++D+Y +S  +D A +    M  K D   W  L      ++N
Sbjct: 680 PRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRN 729



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 9/318 (2%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEEN---VTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +LR C     L LGLQ+   A+  G L + N   + + L+ M+        A +VF  + 
Sbjct: 38  VLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALP 97

Query: 410 YKNITT---WNELLSGYCFNCCDADVLKTFCNIW--ESGVEVNGCTFFYVVETCCRSENQ 464
                +   WN L+ G+         +  +  +W   +    +  T  YVV++C      
Sbjct: 98  RAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAM 157

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
            +   +H      G ++  Y+ S+L+K Y + G L N+ +  +G    D   W  MM   
Sbjct: 158 SLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGC 217

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           +  G    AV +F ++  +G +P+   L   L+ CA          +H   +K G   EV
Sbjct: 218 IKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEV 277

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            VA+ ++  YAKC  +  A   F+     +D++ +N +I     +GL  EA  +F  M+ 
Sbjct: 278 AVANTLLAMYAKCQCLDDAWRLFEL-MPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQR 336

Query: 645 ANLQPSQATFVSVMSACS 662
           +  +P   T VS++ A +
Sbjct: 337 SGARPDSITLVSLLPALT 354


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 172/533 (32%), Positives = 294/533 (55%), Gaps = 2/533 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL ++++M+ +G  +    F   LQ C+ +   + GR++H  I++S ++ +  + N L+
Sbjct: 30  EALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLL 89

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  A +VF+ + D++++SW  +   F       +    +    L+G +P+ V
Sbjct: 90  SMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKV 149

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  LL        L LG ++    +  G   E  V +SL+ M+ +CG +  A  +FD +
Sbjct: 150 TFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRL 209

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             KN+ TW  L++GY         L+    + ++ V  N  TF  +++ C      +   
Sbjct: 210 PEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGK 269

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++H  II++G+    ++ +SLI  Y   G L+ + +  +     D+ +W AM++     G
Sbjct: 270 KVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLG 329

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
            + EA+ +F  + + G KPD+    ++L SC++    Q  K IH  ++  G+N +VY+ S
Sbjct: 330 FHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQS 389

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY-AHHGLVSEAMEIFDKMKLANL 647
           A++  YAKCG +  A + F+Q  +  +V+ +  +I    A HG   EA+E FD+MK   +
Sbjct: 390 ALVSMYAKCGSMDDASLVFNQ-MSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P + TF SV+SAC+H GLV++G   F+SM   YG++P  + Y C VD+L R G+LE+A+
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +VI  MPF P P+V+ +LLS CR+H + E GE A+E +L L P +D A+V LS
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALS 561



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 252/513 (49%), Gaps = 40/513 (7%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            L+S   G +VH  I+K G   + +L+N L++MY+KCG      RVFD + +RN+VSWT 
Sbjct: 59  RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTA 118

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++ A +   +     K Y  MK  G  P++    S++    +    + G  +H   ++  
Sbjct: 119 MIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAG 178

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E  P VG S++  YAK GD++ A  +F  +   +V  W  +I GYA  G    AL ++ 
Sbjct: 179 LELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLE 238

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +M    +  +K TF + LQGC+  A  + G+++H  II+S     + +VN+LI MY K  
Sbjct: 239 TMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG 298

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G++ A K+F  +  +DV++W  +  G+++     +  +LF +    G +P+ +TF+ +L 
Sbjct: 299 GLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLT 358

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C     L  G ++    +H G+  +  + S+L+ M+ +CG+++ A  VF+ +S +N+  
Sbjct: 359 SCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVA 418

Query: 416 WNELLSGYCFN---CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           W  +++G C     C +A  L+ F  + + G++ +  TF  V+  C            H 
Sbjct: 419 WTAIITGCCAQHGRCREA--LEYFDQMKKQGIKPDKVTFTSVLSAC-----------THV 465

Query: 473 AIIKTG---FSS--CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM--------ASWGA 519
            +++ G   F S    Y    +++ Y  F  L         AE + +        + WGA
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGA 525

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           ++SA              HS VE GE+  E +L
Sbjct: 526 LLSACR-----------VHSDVERGERAAENVL 547



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/601 (23%), Positives = 268/601 (44%), Gaps = 43/601 (7%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           VS   + G     L +   M   G          +++ C  + + E G  +H   LK  I
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N ++  ++L+ YAK G +  A RVF SI   ++  W AMI  +       EA     +
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M   G   DK TF++ L   +      +G+++H  I+ + +E    +  +L+ MY K   
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A  +F+R+ +K+V++W  L  G+++         L      +   PN +TF+ +L+ 
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C     L+ G ++    +  G+  E  V +SLI M+C+CG +E A  +F ++ ++++ TW
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTW 318

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++GY       + +  F  + + G++ +  TF  V+ +C      Q   +IH  ++ 
Sbjct: 319 TAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSALVHQ-GHNHEAV 534
            G++   Y+ S+L+  Y   G +D+ S  F+  +ER ++ +W A+++    Q G   EA+
Sbjct: 379 AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIITGCCAQHGRCREAL 437

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDA 593
             F  + + G KPD+    ++L++C  +G  +   K      +  G    V   S  +D 
Sbjct: 438 EYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 497

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
             + G ++ A           +VI+    I                         P  + 
Sbjct: 498 LGRAGHLEEA----------ENVILSMPFI-------------------------PGPSV 522

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEI 712
           + +++SAC     V++G    ++ ++   + P  D  Y  L  + +  G  EDA+ V ++
Sbjct: 523 WGALLSACRVHSDVERG---ERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQV 579

Query: 713 M 713
           M
Sbjct: 580 M 580



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 192/385 (49%), Gaps = 3/385 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D +     L+   N +   LG +VH  IV+ G   +  +  +L+ MY+KCG       
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARV 204

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD + E+N+V+WTL+++   Q G+ D+ L++   M+     PN+    S+++ C +  A
Sbjct: 205 IFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAA 264

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +H + ++    +  +V  S++  Y K G +  A ++F  +   DV  W AM+ G
Sbjct: 265 LEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTG 324

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA  G+  EA+N+   M  +GI  DK TF + L  CS  A    G++IH  ++ +     
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG-FSENKNPGQTASLFHKFI 339
           + + +AL+ MY K   MD A  VF +M++++V++W  +  G  +++    +    F +  
Sbjct: 385 VYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMK 444

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             G +P+ VTF+ +L  C  +  ++ G +  + + L  G        S  + +  R G +
Sbjct: 445 KQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL 504

Query: 399 EMAHSVFDNVSY-KNITTWNELLSG 422
           E A +V  ++ +    + W  LLS 
Sbjct: 505 EEAENVILSMPFIPGPSVWGALLSA 529



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 99/194 (51%), Gaps = 2/194 (1%)

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S L   G   EA+ I ++++  G +    +   +L  CA + + ++ + +H  ++K G 
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
               Y+ + ++  YAKCG +  AR  FD S    +++ +  +I A+       EA + ++
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFD-SIRDRNIVSWTAMIEAFVAGNKNLEAFKCYE 137

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            MKLA  +P + TFVS+++A ++  L+  G  +   +  + G++  P     LV M ++ 
Sbjct: 138 TMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEI-VEAGLELEPRVGTSLVGMYAKC 196

Query: 701 GYLEDAKHVIEIMP 714
           G +  A+ + + +P
Sbjct: 197 GDISKARVIFDRLP 210


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/695 (30%), Positives = 343/695 (49%), Gaps = 48/695 (6%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D++  N  +    K G       VFD M ER++VSW  ++S  ++ G  +  L +Y  M 
Sbjct: 57  DVYSWNAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMV 116

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG-DV 196
            +GF+P+ F + SV+  C  +     G   H  A+K  ++KN FVG ++L+ YAK G  V
Sbjct: 117 GDGFLPSRFTLASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMV 176

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL--- 253
               RVF S+S  +   +  +I G A      EA+++   M  +G+ +D     N L   
Sbjct: 177 DYGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSIS 236

Query: 254 ---QGCSLVADF---DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
              +GC  +++     +G+QIH L +R      + + N+L+++Y K+  M+ A  +F  M
Sbjct: 237 VPREGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEM 296

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            + +V+SWN +  GF +     ++     +   SG  PN VT   +L  C          
Sbjct: 297 PEVNVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGAC---------- 346

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
                                     R G VE    +F+ +   +++ WN +LSGY    
Sbjct: 347 -------------------------FRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYE 381

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              + +  F  +    ++ +  T   ++ +C R    +   QIHG  I+T  S   +I S
Sbjct: 382 HYEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVS 441

Query: 488 SLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
            LI  Y    +++     F +    LD+A W +M+S L     + +A+ +F  + +    
Sbjct: 442 GLIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVL 501

Query: 547 -PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            P+E     +L SC+ + +    +  H  V+K G+ ++ +V +AV D Y KCG+I+ AR 
Sbjct: 502 LPNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQ 561

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD     N VI +N +I  YAH+G   EA++++ +M  A  +P   TFVSV++ACSH G
Sbjct: 562 FFDTVSRKNTVI-WNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSG 620

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LVD G  +  SM   +G++P  D Y C+VD L R G LEDA+ + E  P++ S  ++  L
Sbjct: 621 LVDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEIL 680

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LS CR++G+  L    +EKL+ L P+N AA+VLLS
Sbjct: 681 LSSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLS 715



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/628 (23%), Positives = 280/628 (44%), Gaps = 66/628 (10%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF-GWGLRVFDEM 105
           LA  LS    ++  V+G + HG  VK G   +IF+ N L++MY+KCG+   +G+RVF+ +
Sbjct: 127 LASVLSACSKVQDGVIGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESL 186

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--- 162
           +E N VS+T ++S   +  +    + M+  M   G   +   + +++ + V     +   
Sbjct: 187 SEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPREGCDSLS 246

Query: 163 ------FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                  G  IH  AL+        +  S+L  YAK  D+  AE +F  +   +V  WN 
Sbjct: 247 EIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNI 306

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI G+       +++  +  M   G   ++ T I+ L  C    D + GR+I        
Sbjct: 307 MIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACFRSGDVETGRRI-------- 358

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                                      F  +    V +WN +  G+S  ++  +  + F 
Sbjct: 359 ---------------------------FNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFR 391

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +      +P+  T S++L  C +L  L+ G Q+  +A+     ++ ++ S LI ++  C 
Sbjct: 392 QMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECE 451

Query: 397 AVEMAHSVFDN-VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYV 454
            +E+   +FD+ ++  +I  WN ++SG   N  D   L  F  + ++ V + N  T+  V
Sbjct: 452 KMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIV 511

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           + +C R  +     Q HG ++K+G+ S  ++ +++   Y   G+++++ +F +   R + 
Sbjct: 512 LGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNT 571

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----------A 564
             W  M+    H G   EAV ++  ++ AGEKPD     ++L +C+  G          +
Sbjct: 572 VIWNEMIHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSS 631

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            QR   I P         + Y+   ++D   + G ++ A    + +   +  +++  L+ 
Sbjct: 632 MQRDHGIEP-------ELDHYI--CIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILLS 682

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQA 652
           +   +G VS A  + +K+   + Q S A
Sbjct: 683 SCRVYGDVSLARRVAEKLMHLDPQNSAA 710



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 36/334 (10%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   L+  LS    L+    G Q+HG  ++   + D  + + LIA+YS+C       
Sbjct: 398 LKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICE 457

Query: 100 RVFDE-MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVS 157
            +FD+ + E ++  W  ++S   +N      L ++  M +T+  +PNE     V+  C  
Sbjct: 458 CIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSR 517

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + +   G   H   +K     + FV  +V + Y K G++ +A + F ++S  +   WN M
Sbjct: 518 LCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDTVSRKNTVIWNEM 577

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HG 270
           I GYAH G G EA+++   M+  G   D  TF++ L  CS     D G +I       HG
Sbjct: 578 IHGYAHNGRGDEAVDLYREMISAGEKPDGITFVSVLTACSHSGLVDTGLEILSSMQRDHG 637

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I  E++  I IV+ L       +G         R+ D + ++  T          P +
Sbjct: 638 --IEPELDHYICIVDCL-----GRAG---------RLEDAETLAEAT----------PYK 671

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++S+  + +LS  R  +   S+  R   KL+ LD
Sbjct: 672 SSSVLWEILLSSCRV-YGDVSLARRVAEKLMHLD 704


>gi|302768433|ref|XP_002967636.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
 gi|300164374|gb|EFJ30983.1| hypothetical protein SELMODRAFT_88474 [Selaginella moellendorffii]
          Length = 747

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/701 (28%), Positives = 341/701 (48%), Gaps = 5/701 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  IV  G     ++ N+++ MY + G        F+++ E+N +SWTL ++A  Q
Sbjct: 31  GKHIHSQIVSAGLDRSTYVGNHVLEMYGRLGSVEEAQEAFEKVFEKNHISWTLFIAALAQ 90

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPF 181
           NG     L  +  M   G  P   A   V+  C     +  G  +H   L+  +   + F
Sbjct: 91  NGHCKEALATFKKMDLEGVKPKRLAFLRVIGACCDARDATEGRKVHARVLEDAVLASDVF 150

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  +++N Y K G +  AE VF SI+S D   W +MI  Y        AL +    L EG
Sbjct: 151 LSAALINMYGKCGCLDKAEMVFGSIASKDDFSWTSMIRAYVEHEEFDLALEIYMEFLVEG 210

Query: 242 ITMDKYTFINALQGCSLVADFDI--GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
              D  TF N L+ C+ + +  +  GR +H  I+ S +  ++++VN L+ +Y  S   + 
Sbjct: 211 GKPDASTFKNILRACTRLEEKSLPQGRLVHSQILESGLGSNLALVNRLVYLYGSSGCFEE 270

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  + +RM   + + WN +    S+     Q   LF++  L G +P+ VTF   +  C  
Sbjct: 271 AMDLLDRMNPPEDVPWNAMVAALSQRGKNRQALELFNRTSLEGVKPSGVTFVSGIDACSD 330

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             D   G  +   AL  GF  +E VT  LI M+ +CG +E A  + +   + N+ +   L
Sbjct: 331 GGDEQQGRAIHARALEAGFGSDEVVTGCLINMYGKCGNLEQARRMLEASGWNNLVSCTSL 390

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +  YC +    + L  F  + + G++ N  T   VV     S+       +H  +I+ G 
Sbjct: 391 IWAYCQHGLLENALDVFHRVEQGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARLIELGH 450

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           SS   + ++LI  Y   G L ++      A R +  SW +++ A   QG    A+ +F  
Sbjct: 451 SSDVIVTNALIGMYGKCGSLPDAKMIFANARRKNAVSWNSIIGACSQQGDGKSALDLFAR 510

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  +G  P    L  +L +C  I    R K IH  +       +  V S++++ Y KCG 
Sbjct: 511 MDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVRSSLLNMYTKCGS 570

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  A   F Q + S+ V+ + ++I AYA H    +++++  +M++  ++ ++ TF++V+ 
Sbjct: 571 LVDAEKIF-QRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRMEMEGVKFNEVTFLTVIF 629

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE-IMPFQPS 718
           ACSH G V++GC  F SM  + GM PS + Y C+VD+L+R G++E A   IE  M   P+
Sbjct: 630 ACSHAGFVEQGCHYFVSMTRERGMTPSLEQYSCVVDLLARAGWIEQALDFIERRMHLPPN 689

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
              + +LL+ C+IH + +     +E+++ L P N +A  LL
Sbjct: 690 AATWIALLNACKIHHDLQRAVMVAERIIELSPGNSSACSLL 730



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 181/402 (45%), Gaps = 2/402 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS   G  VH  I++ G  +++ L N L+ +Y   G F   + + D M     V W  +V
Sbjct: 231 KSLPQGRLVHSQILESGLGSNLALVNRLVYLYGSSGCFEEAMDLLDRMNPPEDVPWNAMV 290

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +A  Q G+    L+++      G  P+     S +  C   G  + G +IH  AL+    
Sbjct: 291 AALSQRGKNRQALELFNRTSLEGVKPSGVTFVSGIDACSDGGDEQQGRAIHARALEAGFG 350

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V   ++N Y K G++  A R+  +   +++    ++I  Y   G    AL+V   +
Sbjct: 351 SDEVVTGCLINMYGKCGNLEQARRMLEASGWNNLVSCTSLIWAYCQHGLLENALDVFHRV 410

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              GI  +K T ++ +         D GR +H  +I       + + NALI MY K   +
Sbjct: 411 EQGGIKANKVTLVSVVAAFWSSDFLDRGRAMHARLIELGHSSDVIVTNALIGMYGKCGSL 470

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A  +F     K+ +SWN++ G  S+  +      LF +  LSGS P  +T + +L  C
Sbjct: 471 PDAKMIFANARRKNAVSWNSIIGACSQQGDGKSALDLFARMDLSGSSPTTITLANVLEAC 530

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            ++ DL  G  +  L +    L+ + NV SSL+ M+ +CG++  A  +F       + TW
Sbjct: 531 VRINDLPRGKVIH-LEIRGSMLEHDPNVRSSLLNMYTKCGSLVDAEKIFQRWQSSCVVTW 589

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             +++ Y  +    D LK    +   GV+ N  TF  V+  C
Sbjct: 590 TSMIAAYAKHARFEDSLKLGRRMEMEGVKFNEVTFLTVIFAC 631



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 7/142 (4%)

Query: 30  GNNQFCSDSFLRKD-------PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           G+ +   D F R D        I LA  L     +     G  +H  I      +D  ++
Sbjct: 499 GDGKSALDLFARMDLSGSSPTTITLANVLEACVRINDLPRGKVIHLEIRGSMLEHDPNVR 558

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           ++L+ MY+KCG      ++F       +V+WT +++A  ++  F+  LK+   M+  G  
Sbjct: 559 SSLLNMYTKCGSLVDAEKIFQRWQSSCVVTWTSMIAAYAKHARFEDSLKLGRRMEMEGVK 618

Query: 143 PNEFAVGSVMKVCVSMGASEFG 164
            NE    +V+  C   G  E G
Sbjct: 619 FNEVTFLTVIFACSHAGFVEQG 640


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 211/701 (30%), Positives = 339/701 (48%), Gaps = 11/701 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH  I+  G ++   L + ++ +Y  CG    G  +F  +   N + W  ++      G
Sbjct: 65  QVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLG 124

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            FD  L  Y  M  +   P+++    V+K C  +        +H  A  +    + FVG 
Sbjct: 125 WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGS 184

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  YA  G +  A RVF  +   D   WN M+ GY   G    A+     M      +
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV 244

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  T+   L  C+    F +G Q+HGL+I S  E    + N L+ MY K   +  A K+F
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M   D ++WN L  G+ +N    + A LF+  I +G +P+ VTF+  L        L+
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI-----LE 359

Query: 365 LGLQLQCLALHCGFLDEE-----NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            G    C  +H   +         + S+LI ++ + G VEMA  +F   +  ++     +
Sbjct: 360 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAM 419

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SGY  +  + D + TF  + + G+  N  T   V+  C      ++  ++H  I+K   
Sbjct: 420 ISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQL 479

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            +   + S++   Y   G+LD ++EF       D   W +M+S+    G    AV +F  
Sbjct: 480 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQ 539

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  +G K D   L + L+S A + A    K +H +VI+  F+++ +VASA+ID Y+KCG 
Sbjct: 540 MGMSGAKFDSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGK 599

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR  F+     N+V  +N++I AY +HG   E +++F +M  A + P   TF+ ++S
Sbjct: 600 LALARCVFNLMAGKNEV-SWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIIS 658

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H GLV +G   F  M  +YG+    + Y C+VD+  R G L +A   I+ MPF P  
Sbjct: 659 ACGHAGLVGEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDA 718

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ +LL  CR+HGN EL + AS  LL L PKN   +VLLS
Sbjct: 719 GVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 759



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 242/494 (48%), Gaps = 8/494 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LGTQVHG ++  GF  D  + N L+AMYSKCG      ++F+ M + + V+W  +++  +
Sbjct: 264 LGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYV 323

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  D    ++  M + G  P+     S +   +  G+      +H + ++ R+  + +
Sbjct: 324 QNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVY 383

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K GDV  A ++F   +  DV    AMI GY   G   +A+N    ++ EG
Sbjct: 384 LKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEG 443

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T  + L  C+ +A   +G+++H  I++ ++E  +++ +A+ DMY K   +D A+
Sbjct: 444 MVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAY 503

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           + F RM++ D I WN++   FS+N  P     LF +  +SG++ + V+ S  L     L 
Sbjct: 504 EFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLP 563

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    +   F  +  V S+LI M+ +CG + +A  VF+ ++ KN  +WN +++
Sbjct: 564 ALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIA 623

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ----IHGAIIKT 477
            Y  + C  + L  F  +  +GV  +  TF  ++  C  +    +VG+     H    + 
Sbjct: 624 AYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHA---GLVGEGIHYFHCMTREY 680

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           G  +     + ++  Y   G+L  +F+   +     D   WG ++ A    G+   A   
Sbjct: 681 GIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLA 740

Query: 537 FHSLVEAGEKPDEY 550
              L+E   K   Y
Sbjct: 741 SRHLLELDPKNSGY 754



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 186/405 (45%), Gaps = 1/405 (0%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            + CS  +     RQ+H  II   +    ++ + ++ +Y+    +     +F  +   + 
Sbjct: 51  FRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNA 110

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           + WN +  G             + K + S   P+  TF  +++ CG L ++ L + +   
Sbjct: 111 LPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNT 170

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A   GF  +  V S+LI ++   G +  A  VFD +  ++   WN +L GY  +    + 
Sbjct: 171 ARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNA 230

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           + TFC +  S   VN  T+  ++  C       +  Q+HG +I +GF     + ++L+  
Sbjct: 231 MGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAM 290

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L ++ +  N   + D  +W  +++  V  G   EA  +F++++ AG KPD    
Sbjct: 291 YSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTF 350

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            + L S    G+ +  K +H ++++     +VY+ SA+ID Y K GD++ AR  F Q+  
Sbjct: 351 ASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQN-T 409

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
             DV V   +I  Y  HGL  +A+  F  +    + P+  T  SV
Sbjct: 410 LVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASV 454



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 165/385 (42%), Gaps = 11/385 (2%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L R C     +    Q+    +  G  D   ++S ++ ++  CG +    ++F  +   N
Sbjct: 50  LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCN 109

Query: 413 ITTWNELLSG-YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
              WN ++ G Y     D  +L  F  +  S V  +  TF YV++ C    N  +   +H
Sbjct: 110 ALPWNWMIRGLYMLGWFDFALLFYF-KMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 168

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
                 GF    ++ S+LIK Y + G + ++    +   + D   W  M+   V  G  +
Sbjct: 169 NTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFN 228

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            A+  F  +  +    +      IL+ CA  G +     +H  VI  GF  +  VA+ ++
Sbjct: 229 NAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLV 288

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             Y+KCG++  AR  F+ +    D + +N LI  Y  +G   EA  +F+ M  A ++P  
Sbjct: 289 AMYSKCGNLFDARKLFN-TMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 347

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP-DCY--GCLVDMLSRNGYLEDAKH 708
            TF S + +    G + + C   K + S       P D Y    L+D+  + G +E A+ 
Sbjct: 348 VTFASFLPSILESGSL-RHC---KEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARK 403

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHG 733
           + +         V  +++SG  +HG
Sbjct: 404 IFQQNTLV-DVAVCTAMISGYVLHG 427



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 8/202 (3%)

Query: 531 HEAVTIFHSLVEAGEKPDEYI---LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           H A T   + V +  +  +Y+   L ++  +C+     Q+ + +H  +I  G +    ++
Sbjct: 23  HTAGTSICNNVMSKPETQDYLTTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALS 82

Query: 588 SAVIDAYAKCGDIK-GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
           S V+  Y  CG I  G  + F       + + +N +I      G    A+  + KM  +N
Sbjct: 83  SRVLGLYVLCGRISDGGNLFF--GLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSN 140

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           + P + TF  V+ AC     V   C++  +     G          L+ + + NGY+ DA
Sbjct: 141 VSPDKYTFPYVIKACGGLNNVPL-CMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDA 199

Query: 707 KHVIEIMPFQPSPTVYRSLLSG 728
           + V + +P Q    ++  +L G
Sbjct: 200 RRVFDELP-QRDTILWNVMLHG 220


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 207/722 (28%), Positives = 360/722 (49%), Gaps = 17/722 (2%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I   +SLSL    K   L       I+  G + +IF+ + LI+ Y+  G      RVF  
Sbjct: 32  ILCDQSLSLESLRKHNAL-------IITGGLSENIFVASKLISSYASYGKPNLSSRVFHL 84

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  R++  W  I+ A   NG++   L  +  M  +G  P+ F    V+  C  +     G
Sbjct: 85  VTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVG 144

Query: 165 YSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
             +H   LK    ++N  VG S + FY+K G +  A  VF  +   DV  W A+I G+  
Sbjct: 145 TFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQ 204

Query: 224 CGYGFEALNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            G     L  +  M   G  +DK    T     Q CS +     GR +HG  +++ +  S
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + +++   Y KS     A+  F  + D+D+ SW ++    + + +  ++  +F +   
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN 324

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
            G  P+ V  S L+ + GK++ +  G       + HC  LD   V +SL+ M+C+   + 
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS-TVCNSLLSMYCKFELLS 383

Query: 400 MAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +A  +F  +S + N   WN +L GY    C    ++ F  I   G+E++  +   V+ +C
Sbjct: 384 VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                  +   +H  ++KT       + +SLI  Y   G L  ++     A+  ++ +W 
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWN 502

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AM+++ VH   + +A+ +F  +V    KP    L T+L +C   G+ +R + IH ++ + 
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
                + +++A+ID YAKCG ++ +R  FD   N  D + +N +I  Y  HG V  A+ +
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAG-NQKDAVCWNVMISGYGMHGDVESAIAL 621

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           FD+M+ ++++P+  TF++++SAC+H GLV++G  LF  M  QY ++P+   Y CLVD+LS
Sbjct: 622 FDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLS 680

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R+G LE+A+  +  MPF P   ++ +LLS C  HG  E+G   +E+ +   P+ND  +++
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIM 740

Query: 759 LS 760
           L+
Sbjct: 741 LA 742



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/527 (22%), Positives = 240/527 (45%), Gaps = 36/527 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + +P  L        NL +   G  +HG  VK G  +  F+Q+++ + YSK G       
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F E+ + ++ SWT I+++  ++G+ +    M+ +M+  G  P+   +  ++     M  
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIG 219
              G + H F ++     +  V  S+L+ Y K   ++ AE++F  IS + +   WN M+ 
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       + + +   +   GI +D  +  + +  CS +    +G+ +H  ++++ ++ 
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +IS+VN+LID+Y K   +  A+++F   AD +VI+WN +   +   +   +  +LF + +
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
               +P+ +T   LL  C     L+ G  +             +++++LI M+ +CG +E
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            +  +FD  + K+   WN ++SGY  +      +  F  + ES V+  G TF  ++  C 
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSAC- 644

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                      H  +++ G            K ++   Q D          + ++  +  
Sbjct: 645 ----------THAGLVEQG-----------KKLFLKMHQYD---------VKPNLKHYSC 674

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           ++  L   G+  EA +   S+  +   PD  I GT+L+SC   G ++
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFS---PDGVIWGTLLSSCMTHGEFE 718


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 199/696 (28%), Positives = 332/696 (47%), Gaps = 1/696 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  ++  G    + L + ++ MY  C  F     +F  +     + W  ++      G
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            FD  L  +  M  +   P+++    V+K C  +        +H  A  +    + F+G 
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++  Y   G +  A+ +F  +   D   WN M+ GY   G    AL     M    +  
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  +F+  L  C+       G Q+HGL+IRS  E   ++ N +I MY K   +  A K+F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M   D ++WN L  G+ +N    +  +LF   + SG + + +TF+  L    K   L 
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
              ++    +  G   +  + S+L+ ++ + G VEMA   F   +  ++     ++SGY 
Sbjct: 397 YCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N  + + L  F  + + G+  N  T   V+  C    + ++  ++H  I+K G  +   
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + SS+   Y   G+LD +++F       D   W  M+ +    G    A+ +F  +  +G
Sbjct: 517 VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSG 576

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K D   L   L++CA   A    K +H FV++  F ++ +VAS +ID Y+KCG +  AR
Sbjct: 577 TKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALAR 636

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD     N+V  +N++I AY +HG   E +++F +M  A +QP   TF+ +MSAC H 
Sbjct: 637 SVFDMMDWKNEV-SWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHA 695

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F+ M  +YG+    + + C+VD+  R G L +A   I+ MPF P    + S
Sbjct: 696 GLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGS 755

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL  CR+HGN EL + AS+ L+ L P N   +VLLS
Sbjct: 756 LLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLS 791



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 150/629 (23%), Positives = 289/629 (45%), Gaps = 7/629 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           L   VH     +GF  D+F+ ++LI +Y+  GY      +FDE+  R+ + W ++++  +
Sbjct: 195 LCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYV 254

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG+F+  L  + +M+ +   PN  +   ++ VC + G    G  +H   ++   E +P 
Sbjct: 255 KNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPT 314

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++  Y+K G++  A ++F  +   D   WN +I GY   G+  EA+ +  +M+  G
Sbjct: 315 VANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSG 374

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  TF + L            +++H  I+R  V   + + +AL+D+Y K   ++ A 
Sbjct: 375 VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMAC 434

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F++    DV     +  G+  N    +  +LF   I  G  PN +T + +L  C  L 
Sbjct: 435 KTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALA 494

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG +L C  L  G  +   V SS+ YM+ + G +++A+  F  +  K+   WN ++ 
Sbjct: 495 SLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIV 554

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  N      +  F  +  SG + +  +    +  C          ++H  +++  F S
Sbjct: 555 SFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS 614

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ S+LI  Y   G+L  +    +  +  +  SW ++++A  + G   E + +FH +V
Sbjct: 615 DTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMV 674

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDAYAKCG 598
           EAG +PD      I+++C   G     + I+ F     + G    +   + ++D Y + G
Sbjct: 675 EAGIQPDHVTFLVIMSACGHAGLVD--EGIYYFRCMTEEYGICARMEHFACMVDLYGRAG 732

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A         + D   + +L+ A   HG V E  ++  K  L  L P+ + +  ++
Sbjct: 733 RLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNV-ELAKLASK-HLVELDPNNSGYYVLL 790

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           S         +  L  +S+  + G+Q  P
Sbjct: 791 SNVHAGAGEWESVLKVRSLMKEKGVQKIP 819



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 212/457 (46%), Gaps = 10/457 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           RQIH  ++   +  S+++ + ++ MY+          +F R+     + WN L  GFS  
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                    F + + S   P+  TF  +++ CG L ++ L   +  LA   GF  +  + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           SSLI ++   G +  A  +FD +  ++   WN +L+GY  N      L TF  +  S V+
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            N  +F  ++  C      +   Q+HG +I++GF S   + +++I  Y   G L ++ + 
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKI 335

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +   + D  +W  +++  V  G   EAV +F ++V +G K D     + L S    G+ 
Sbjct: 336 FDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL 395

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +  K +H ++++ G   +VY+ SA++D Y K GD++ A   F Q+    DV V   +I  
Sbjct: 396 KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQN-TLVDVAVCTAMISG 454

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQY 681
           Y  +GL  EA+ +F  +    + P+  T  SV+ AC+    +  G    C + K      
Sbjct: 455 YVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK----- 509

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           G++        +  M +++G L+ A      MP + S
Sbjct: 510 GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDS 546



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 4/310 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A  L     L S  LG ++H  I+K G  N   + +++  MY+K G      + F  M 
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP 542

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ V W L++ +  QNG+ ++ + ++  M T+G   +  ++ + +  C +  A  +G  
Sbjct: 543 VKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKE 602

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HCF ++     + FV  ++++ Y+K G +A A  VF  +   +   WN++I  Y + G 
Sbjct: 603 LHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGR 662

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVN 285
             E L++   M+  GI  D  TF+  +  C      D G      +      C+ +    
Sbjct: 663 PRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFA 722

Query: 286 ALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            ++D+Y ++  +  AF   + M    D  +W +L G    + N  + A L  K ++    
Sbjct: 723 CMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNV-ELAKLASKHLVELD- 780

Query: 345 PNHVTFSILL 354
           PN+  + +LL
Sbjct: 781 PNNSGYYVLL 790



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 4/181 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+ +LS   N  +   G ++H  +V+  F +D F+ + LI MYSKCG       VF
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVF 639

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M  +N VSW  I++A   +G     L ++ +M   G  P+      +M  C   G  +
Sbjct: 640 DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVD 699

Query: 163 FG-YSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIG 219
            G Y   C   +  I  +     C V + Y + G +  A     S+  + D G W +++G
Sbjct: 700 EGIYYFRCMTEEYGICARMEHFACMV-DLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLG 758

Query: 220 G 220
            
Sbjct: 759 A 759



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 65/151 (43%), Gaps = 2/151 (1%)

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           Q+ + IH  V+  G N  + + S ++  Y  C   K     F +       + +N LI  
Sbjct: 93  QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCR-LQLCYSLPWNWLIRG 151

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           ++  G    A+  F +M  +N+ P + TF  V+ AC     V   C +   +    G   
Sbjct: 152 FSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPL-CKMVHELARSMGFHM 210

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
                  L+ + + NGY+ DAK++ + +P +
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVR 241


>gi|224146493|ref|XP_002326026.1| predicted protein [Populus trichocarpa]
 gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa]
          Length = 737

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 211/719 (29%), Positives = 350/719 (48%), Gaps = 51/719 (7%)

Query: 58  KSRVLGTQ--VHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           K R L T   +H   + +G   +   F+ NN+I+ Y+         +VFD M  RN VS+
Sbjct: 23  KLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVPMAHKVFDNMPHRNKVSY 82

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             I+S   + G  +   + + +M   GF PN F +  ++  C SM   + G  I   AL 
Sbjct: 83  NSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLS-CASM---DVGRGIMLQALA 138

Query: 174 IR---IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           I+      + FVG ++L  + + G +  A  VF  +    +  WN+MI    H G+  + 
Sbjct: 139 IKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTWNSMISLLGHHGFVEDC 198

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +   ++ +  ++ K +F   L G     D + G QIHGL+I+S ++C + + N+LI+M
Sbjct: 199 VVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINM 258

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y + S M    K+FE +  +DV++WNT+   FS++KNPG+   +F K    G  PN  TF
Sbjct: 259 YARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTF 318

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             ++  C  LL    G  +    +      +  + S+L+  + +CG ++ AH  F  +  
Sbjct: 319 VSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQ 378

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           KN+ +WN L+ GY   C  A V      + + G   N  +F  V+++    E    + QI
Sbjct: 379 KNVVSWNSLILGYANKCSFASV-SLLLEMLKLGFRPNEFSFSAVLKSSLVLE----LKQI 433

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL------------------ 512
           H   I+ G+ +  Y+ +SLI SY   G + ++  F   +E L                  
Sbjct: 434 HSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASETLLAVVPANSIAGIYNRSGQ 493

Query: 513 --------------DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
                         D  SW  +++A    G+ +E   +F  +  A   PD Y   ++L  
Sbjct: 494 YFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCV 553

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
            + +       SIH  +IK  F+  ++ V + +ID Y KCG+++ +   FD S    ++I
Sbjct: 554 SSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFD-SMTERNLI 612

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +  LI A   +G   EA+E F+ M+    +P +  F++V++AC H  LV +G  LF  M
Sbjct: 613 TWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKM 672

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           ++ Y ++P  D Y CLVD+L+RNG+LE+A+ VI  MPF P   ++RS L GC+   N E
Sbjct: 673 NN-YHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGCKKRRNTE 730



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 154/636 (24%), Positives = 287/636 (45%), Gaps = 60/636 (9%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP----FVGCSVLNFYAKLGDV 196
           F+  ++ +  +++ C  + A +    +H  AL I I  NP    FV  ++++FYA    V
Sbjct: 7   FLKYQYRLLQLLQSCSKLRALDTTKPLH--ALTITIGPNPEQSTFVYNNIISFYASFNQV 64

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A +VF ++   +   +N++I  ++  GY  EA      M+  G   + +T    L G 
Sbjct: 65  PMAHKVFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFT----LSGL 120

Query: 257 SLVADFDIGRQI--HGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
              A  D+GR I    L I++ + CS + +  AL+ ++ +   +D AF VFE M DK ++
Sbjct: 121 LSCASMDVGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLV 180

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WN++      +        LF K +      +  +F  +L       DL+ G Q+  L 
Sbjct: 181 TWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDLEFGGQIHGLV 240

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  G   E  V++SLI M+ R  ++     +F+ V  +++ TWN ++S +  +      L
Sbjct: 241 IKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKAL 300

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKS 492
           + F  + E G+  N  TF  V+ + C S    M G+ +HG I+KT   +  Y+ S+L+  
Sbjct: 301 EVFLKMSEDGIMPNQTTFVSVINS-CTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDY 359

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G+LDN+        + ++ SW +++    ++  +  +V++   +++ G +P+E+  
Sbjct: 360 YAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANKC-SFASVSLLLEMLKLGFRPNEFSF 418

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA--------- 603
             +L S   +      K IH   I+LG+    YV +++I +Y + G I  A         
Sbjct: 419 SAVLKSSLVL----ELKQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASET 474

Query: 604 ----------------------RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
                                  + F       D + +N +I A A +G  +E  E+F  
Sbjct: 475 LLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKH 534

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGC----LLFKSMDSQYGMQPSPDCYGCLVDML 697
           M++A + P   T+ S++   S    +  G     LL K+  S + +         L+DM 
Sbjct: 535 MRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIV----VRNVLIDMY 590

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            + G LE +  + + M  + +   + +L+S   I+G
Sbjct: 591 GKCGNLESSAKIFDSMT-ERNLITWTALISALGING 625



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 2/172 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           L +S  + +  LG+ +HG ++K  F+  DI ++N LI MY KCG      ++FD M ERN
Sbjct: 551 LCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERN 610

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           L++WT ++SA   NG     L+ + DM+  G  P++ A  +V+  C        G  +  
Sbjct: 611 LITWTALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFG 670

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
                 IE +      +++  A+ G +  AE+V   +    D   W + + G
Sbjct: 671 KMNNYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEG 722


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 210/730 (28%), Positives = 367/730 (50%), Gaps = 9/730 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q   D F R +   L   +S+   L  R  G  +H   +K G   D  L    I+MY+  
Sbjct: 233 QMQQDGF-RPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAF 291

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G+    L +F +    NLVS   ++S  +Q+G ++    ++  M+  G +PN   V S++
Sbjct: 292 GHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSIL 351

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C +      G S+H   +K  + +   V  ++++ Y+KLGD+ +A  +F S++     
Sbjct: 352 PCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQL 411

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN++I GY         +  V  M  EG+  D  T I+ +  C    D  +G+ IH   
Sbjct: 412 LWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYA 471

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +RS +E + S++NAL+ MY     +    K+F  M  + +ISWNT+  GF+EN +     
Sbjct: 472 VRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACL 531

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
             F +  L+  + + VT   L+     + D+ +G  +  LA+  G   + +V ++LI M+
Sbjct: 532 RFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMY 591

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
             CG ++    +FD++S  N  ++N L++GY  N    ++L  F ++ ++  + N  T  
Sbjct: 592 TNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLL 651

Query: 453 YVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAE 510
            ++  C    + Q+ G+ +H   I+        + +S I  Y  F  L+     F    E
Sbjct: 652 NLLPIC----HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGE 707

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           R ++  W A++SA V       A   F  +     K D   +  ++++C+ +G     + 
Sbjct: 708 RNNIV-WNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAEC 766

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +    ++ GF+  + V +A+ID +++CG I  AR  FD S    D + ++T+I AY+ HG
Sbjct: 767 VTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISME-KDSVSWSTMINAYSMHG 825

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
               A+++F  M  + ++P   TFVSV+SACS  G +++G  LF+SM + +G+ P  + Y
Sbjct: 826 DGGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHY 885

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R G+L++A  ++  MPF+PS ++  SLL  CR HGN +LGE   + L     
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945

Query: 751 KNDAAHVLLS 760
            N  ++V+LS
Sbjct: 946 GNPRSYVMLS 955



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 151/674 (22%), Positives = 318/674 (47%), Gaps = 8/674 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG +VH  +V+ G   ++ +Q  L+ MY+K G      RVFD M  R+L+SW  ++S   
Sbjct: 160 LGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYS 219

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG      +    M+ +GF PN  ++  ++ +   +G  + G  +H FALK  +  +  
Sbjct: 220 LNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDES 279

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  + ++ YA  G ++++  +F+    D++   N+MI      G   +A  V   M  +G
Sbjct: 280 LTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKG 339

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T ++ L  CS     + G  +HG++I+  +   +S+V+AL+ MY K   +D A 
Sbjct: 340 LVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAV 399

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  + +K  + WN+L  G+  N           +  + G  P+ +T   ++ +C    
Sbjct: 400 FLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTE 459

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL +G  +   A+       E+V ++L+ M+  CG + +   +F  +  + + +WN ++S
Sbjct: 460 DLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIIS 519

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+  N      L+ FC +  + ++ +  T   ++ +    E+  +   +H   I++G + 
Sbjct: 520 GFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNL 579

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y N G +    +  +    ++  S+ A+M+         E + +F+ ++
Sbjct: 580 DVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMI 639

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +  +KP+   + T+LN      +  + K++H + I+     E  + ++ I  Y++  +++
Sbjct: 640 KNDQKPN---IITLLNLLPICHSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLE 696

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                F      N+ IV+N ++ A         A + F +++  N++    T ++++SAC
Sbjct: 697 YCHNLFCLVGERNN-IVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISAC 755

Query: 662 SHKGLVDKG-CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           S  G  D   C+   ++  Q G   +      L+DM SR G +  A+ + +I   +    
Sbjct: 756 SQLGKADLAECV--TAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDI-SMEKDSV 812

Query: 721 VYRSLLSGCRIHGN 734
            + ++++   +HG+
Sbjct: 813 SWSTMINAYSMHGD 826



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 237/522 (45%), Gaps = 1/522 (0%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
            F  + F    V++ C ++     G  +HC  ++     N  V  ++L+ YAK G V  +
Sbjct: 137 AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLS 196

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RVF  + S D+  WNAMI GY+  G   EA   +  M  +G   +  + +  +   S +
Sbjct: 197 RRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGL 256

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              D G  +H   ++S V    S+  A I MY     +  +  +F +    +++S N++ 
Sbjct: 257 GVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMI 316

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
               ++    +   +F      G  PN VT   +L  C     ++ G  +  + +  G  
Sbjct: 317 SVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLA 376

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           ++ +V S+L+ M+ + G ++ A  +F +V+ K+   WN L+SGY  N     V+ +   +
Sbjct: 377 EQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRM 436

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              GV+ +  T   V+  C  +E+  +   IH   +++       + ++L+  Y + GQL
Sbjct: 437 QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQL 496

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
               +  +  E   + SW  ++S     G +   +  F  +  A  + D   L  +++S 
Sbjct: 497 SICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSL 556

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +AI      +S+H   I+ G N +V VA+A+I  Y  CG I+     FD S +S + I Y
Sbjct: 557 SAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFD-SLSSVNTISY 615

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           N L+  Y  + L  E + +F  M   + +P+  T ++++  C
Sbjct: 616 NALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLLNLLPIC 657


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 202/666 (30%), Positives = 334/666 (50%), Gaps = 20/666 (3%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ + +++      +  Y+DM   G  P+ FA  +++K    +   + G  IH    
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 173 KIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           K     +   V  +++N Y K GD  A  +VF  IS  +   WN++I           AL
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 232 NVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVECSISIVNALI 288
                ML E +    +T ++    CS   +     +G+Q+H   +R + E +  I+N L+
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLV 239

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  +  +      +D+++WNT+     +N+   +      + +L G  P+  
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGF 299

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDN 407
           T S +L  C  L  L  G +L   AL  G LDE + V S+L+ M+C C  V     VFD 
Sbjct: 300 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDG 359

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQM 466
           +  + I  WN +++GY  N  D + L  F  + ES G+  N  T   VV  C RS     
Sbjct: 360 MFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSK 419

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IHG ++K G     ++ ++L+  Y   G++D +       E  D+ +W  +++  V 
Sbjct: 420 KEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVF 479

Query: 527 QGHNHEAVTIFHSLV----EAGE-------KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
              + +A+ + H +     +A E       KP+   L TIL SCAA+ A  + K IH + 
Sbjct: 480 SERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 539

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           IK    T+V V SA++D YAKCG ++ +R  FDQ     +VI +N ++MAY  HG   +A
Sbjct: 540 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ-IPIRNVITWNVIVMAYGMHGNSQDA 598

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++   M +  ++P++ TF+SV +ACSH G+V++G  +F +M   YG++PS D Y C+VD
Sbjct: 599 IDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVD 658

Query: 696 MLSRNGYLEDAKHVIEIMPFQ-PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           +L R G +++A  +I ++P        + SLL  CRIH N E+GE A++ L+ L P   +
Sbjct: 659 LLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVAS 718

Query: 755 AHVLLS 760
            +VLL+
Sbjct: 719 HYVLLA 724



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 198/414 (47%), Gaps = 14/414 (3%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           ++G QVH + ++ G  N  F+ N L+AMY K G       +      R+LV+W  ++S+ 
Sbjct: 215 LMGKQVHAYGLRKGELNS-FIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSL 273

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKN 179
            QN +F   L+   +M   G  P+ F + SV+  C  +     G  +H +ALK   +++N
Sbjct: 274 CQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 333

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-L 238
            FVG ++++ Y     V +  RVF  +    +G WNAMI GYA   Y  EAL +   M  
Sbjct: 334 SFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEE 393

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+  +  T    +  C     F     IHG +++  ++    + NAL+DMY +   +D
Sbjct: 394 SAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKID 453

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-------SGSR----PNH 347
            A ++F +M D+D+++WNT+  G+  ++       + HK  +         SR    PN 
Sbjct: 454 IAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNS 513

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           +T   +L  C  L  L  G ++   A+      +  V S+L+ M+ +CG ++M+  VFD 
Sbjct: 514 ITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 573

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +  +N+ TWN ++  Y  +    D +     +   GV+ N  TF  V   C  S
Sbjct: 574 IPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHS 627



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 156/671 (23%), Positives = 304/671 (45%), Gaps = 26/671 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWG 98
           ++ D       L    +L+   LG Q+H H+ K G+  D + + N L+ +Y KCG FG  
Sbjct: 89  IKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 148

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VFD ++ERN VSW  ++S+     +++M L+ +  M      P+ F + SV   C + 
Sbjct: 149 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNF 208

Query: 159 GASE---FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
              E    G  +H + L+ + E N F+  +++  Y K+G +A+++ +  S    D+  WN
Sbjct: 209 PMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWN 267

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            ++          EAL  +  M+ EG+  D +T  + L  CS +     G+++H   +++
Sbjct: 268 TVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKN 327

Query: 276 EVECSISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
                 S V +AL+DMY     +    +VF+ M D+ +  WN +  G+++N+   +   L
Sbjct: 328 GSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLL 387

Query: 335 FHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           F +   S G   N  T + ++  C +         +    +  G   +  V ++L+ M+ 
Sbjct: 388 FIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYS 447

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL-----------KTFCNIWES 442
           R G +++A  +F  +  +++ TWN +++GY F+    D L           K        
Sbjct: 448 RLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRV 507

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            ++ N  T   ++ +C          +IH   IK   ++   + S+L+  Y   G L  S
Sbjct: 508 SLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMS 567

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +     ++ +W  ++ A    G++ +A+ +   ++  G KP+E    ++  +C+  
Sbjct: 568 RKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHS 627

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVY 619
           G       I  + +K  +  E      + V+D   + G +K A    +    N +    +
Sbjct: 628 GMVNEGLKIF-YNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAW 686

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMD 678
           ++L+ A   H  + E  EI  +  L  L+P+ A+ +V + +  S  GL  K   + ++M 
Sbjct: 687 SSLLGACRIHNNL-EIGEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMK 744

Query: 679 SQYGMQPSPDC 689
           +Q G++  P C
Sbjct: 745 AQ-GVRKEPGC 754


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 200/707 (28%), Positives = 348/707 (49%), Gaps = 9/707 (1%)

Query: 62  LGTQVHGHIV---KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM---AERNLVSWTL 115
           LG Q+H   V    L   N + L   L+ MY     F   + VF  +   A  + + W  
Sbjct: 50  LGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNW 109

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA--VGSVMKVCVSMGASEFGYSIHCFALK 173
           ++      G   + +  YV M T+   P+  A  +  V+K C ++GA   G  +H  A  
Sbjct: 110 LIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARA 169

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  + +VG +++  Y+  G +  A   F  +   D   WN M+ GY   G    A+ +
Sbjct: 170 TGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRL 229

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             +M   G   +  T    L  C+  AD   G Q+H L ++  +E  +++ N L+ MY K
Sbjct: 230 FRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAK 289

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +D A+++FE +   D+++WN +  G  +N    +   LF   + SG+RP+ VT   L
Sbjct: 290 CRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSL 349

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L     L  L  G ++    +      +  + S+L+ ++ +C  V  A +++D     ++
Sbjct: 350 LPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDV 409

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
              + ++SGY  N      L+ F  + E  ++ N  T   V+  C       +  +IHG 
Sbjct: 410 VIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGY 469

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +++  +    Y+ S+L+  Y   G+LD S    +     D  +W +M+S+    G   EA
Sbjct: 470 VLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEA 529

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  +   G K +   + + L++CA++ A    K IH  +IK     +++  SA+ID 
Sbjct: 530 LDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDM 589

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG+++ A   F+   + N+V  +N++I AY  HGLV E++    +M+    +P   T
Sbjct: 590 YAKCGNMELALRVFEFMPDKNEV-SWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVT 648

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F++++SAC+H GLV++G  LF+ M  +Y + P  + + C+VD+ SR+G L+ A   I  M
Sbjct: 649 FLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM 708

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PF+P   ++ +LL  CR+H N EL + AS++L  L P N   +VL+S
Sbjct: 709 PFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMS 755



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 144/595 (24%), Positives = 272/595 (45%), Gaps = 17/595 (2%)

Query: 150 SVMKVCVSMGASEFGYSIHCFAL---KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           ++++ CVS      G  IH  A+    +    +  +   +L  Y        A  VF ++
Sbjct: 37  ALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96

Query: 207 SSDDVGC---WNAMIGGYAHCGYGFEALNVVSSMLFE--GITMDKYTFINALQGCSLVAD 261
                G    WN +I G+   G+   A+     M       + D +T    ++ C+ +  
Sbjct: 97  PRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
             +GR +H     + +   + + +ALI MY  +  +  A   F+ M  +D + WN +  G
Sbjct: 157 VSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDG 216

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           + +  + G    LF    +SG  PN  T +  L  C    DL  G+QL  LA+ CG   E
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQE 276

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V ++L+ M+ +C  ++ A  +F+ +   ++ TWN ++SG   N    + L  FC++  
Sbjct: 277 VAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLR 336

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           SG   +  T   ++         +   ++HG II+       ++ S+L+  Y     +  
Sbjct: 337 SGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRT 396

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +    + A  +D+     ++S  V  G + +A+ +F  L+E   KP+   + ++L +CA+
Sbjct: 397 ARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACAS 456

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           I A    + IH +V++  +  + YV SA++D YAKCG +  +   F +  +  D + +N+
Sbjct: 457 ISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSK-MSLKDEVTWNS 515

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I +++ +G   EA+++F +M +  ++ +  T  S +SAC+    +  G    K +    
Sbjct: 516 MISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYG----KEIHGVI 571

Query: 682 GMQP-SPDCYG--CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
              P   D +    L+DM ++ G +E A  V E MP   +   + S++S    HG
Sbjct: 572 IKGPIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISAYGAHG 625



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + L   L    +L     G +VHG+I++     D FL + L+ +Y KC        
Sbjct: 340 RPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARN 399

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           ++D     ++V  + ++S  + NG  +  L+M+  +      PN   V SV+  C S+ A
Sbjct: 400 LYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISA 459

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  IH + L+   E   +V  ++++ YAK G +  +  +F  +S  D   WN+MI  
Sbjct: 460 LPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISS 519

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           ++  G   EAL++   M  EGI  +  T  +AL  C+ +     G++IHG+II+  ++  
Sbjct: 520 FSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKAD 579

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I   +ALIDMY K   M+ A +VFE M DK+ +SWN++   +  +    ++ S  H+   
Sbjct: 580 IFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQE 639

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G +P+HVTF  L+  C     ++ GLQL QC+             + ++ ++ R G ++
Sbjct: 640 EGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLD 699

Query: 400 MAHSVFDNVSYK-NITTWNELL 420
            A     ++ +K +   W  LL
Sbjct: 700 KAIQFIADMPFKPDAGIWGALL 721



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 139/290 (47%), Gaps = 2/290 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +A  L    ++ +  LG ++HG++++  +    ++++ L+ MY+KCG      
Sbjct: 440 IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSH 499

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +M+ ++ V+W  ++S+  QNGE    L ++  M   G   N   + S +  C S+ 
Sbjct: 500 YIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLP 559

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A  +G  IH   +K  I+ + F   ++++ YAK G++  A RVF  +   +   WN++I 
Sbjct: 560 AIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIIS 619

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VE 278
            Y   G   E+++ +  M  EG   D  TF+  +  C+     + G Q+   + +   + 
Sbjct: 620 AYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIA 679

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
             +     ++D+Y +S  +D A +    M  K D   W  L      ++N
Sbjct: 680 PRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRN 729


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 194/705 (27%), Positives = 342/705 (48%), Gaps = 2/705 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AI 121
           G  VH   ++ GF  +  +   L+ MY KCG       VF+EMAE+N+V+W  ++   ++
Sbjct: 77  GILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSL 136

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q   + + ++++  M   G   N     +V+   V   A   G  IH    +     + F
Sbjct: 137 QGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVF 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++N Y K G +  A +VF  +    VG WN+MI  Y+      EA  +   M  EG
Sbjct: 197 VNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEG 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D+ TF++ L  C        G+ +   I  +  E  + +  ALI MY +    + A 
Sbjct: 257 ERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAA 316

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF RM   ++I+W+ +   F+++ + G+    F      G  PN VTF  LL       
Sbjct: 317 QVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPS 376

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+   ++  L    G  D   + ++L+ ++ RC + + A +VFD +   N+ +WN ++ 
Sbjct: 377 GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIG 436

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y       D L+ F  + + G++ +   F  ++  C    + +    +H  + ++G   
Sbjct: 437 IYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGG 496

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SL+  Y   G+LD +       +   + +W  +++     G + EA+  +  L 
Sbjct: 497 SPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQ 556

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
                 D+    ++LN+C +  +    K IH   ++ G +++V V +A+ + Y+KCG ++
Sbjct: 557 LEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSME 616

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD S      + +N ++ AYA HG   E +++  KM+   ++ +  TFVSV+S+C
Sbjct: 617 NARRIFD-SMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSC 675

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GL+ +GC  F S+    G++   + YGCLVD+L R G L++A+  I  MP +P    
Sbjct: 676 SHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVT 735

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQR 766
           + SLL  CR+  + + G+ A+ KLL L P N +A V+LS    +R
Sbjct: 736 WASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSER 780



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 177/675 (26%), Positives = 324/675 (48%), Gaps = 13/675 (1%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MYS+CG  G  +  F ++  RN+VSW +++SA      F   L ++  M   G  PN   
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           + +V+  C S      G  +H  +L+    +N  V  ++LN Y K G +  A+ VF  ++
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 208 SDDVGCWNAMIGGYAHCGYGFE-ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
             +V  WNAM+G Y+  G  ++ A+ + + ML EG+  +  TF+N L           G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            IH  +  SE    + +  AL++ Y K   +  A KVF+ M  + V +WN++   +S ++
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
             G+   +F +    G R + VTF  +L  C     L  G  ++       F  +  V +
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGT 300

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI M+ RC + E A  VF  +   N+ TW+ +++ +  +    + L+ F  + + G+  
Sbjct: 301 ALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILP 360

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  TF  ++         + + +IH  I + G      + ++L+  Y      D++    
Sbjct: 361 NRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVF 420

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  E  ++ SW +M+   V    + +A+ +F ++ + G +PD     TIL +C  IG++ 
Sbjct: 421 DQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC-TIGSHG 479

Query: 567 RTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           RT+  +H  V + G      V +++++ YAK G++  A +   Q  +   +  +N LI  
Sbjct: 480 RTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVIL-QEMDEQQITAWNVLING 538

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           YA HG   EA+E + K++L  +   + TF+SV++AC+    + +G ++  S   + G+  
Sbjct: 539 YALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMI-HSNAVECGLDS 597

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
                  L +M S+ G +E+A+ + + MP + S   +  +L     HG        SE++
Sbjct: 598 DVIVKNALTNMYSKCGSMENARRIFDSMPIR-SAVSWNGMLQAYAQHGE-------SEEV 649

Query: 746 LLLLPKNDAAHVLLS 760
           L L+ K +   V L+
Sbjct: 650 LKLIRKMEQEGVKLN 664


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 182/662 (27%), Positives = 345/662 (52%), Gaps = 7/662 (1%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD+   R+  S+  ++    ++G      ++++++   G   +     SV+KV  ++  
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
             FG  +HC  +K     +  VG S+++ Y K  +     +VF  +   +V  W  +I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA      E L +   M  EG   + +TF  AL   +       G Q+H +++++ ++ +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I + N+LI++Y+K   +  A  +F++   K V++WN++  G++ N    +   +F+   L
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +  R +  +F+ +++ C  L +L    QL C  +  GFL ++N+ ++L+  + +C A+  
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348

Query: 401 AHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           A  +F  +    N+ +W  ++SG+  N    + +  F  +   GV  N  T+  ++    
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                    ++H  ++KT +     + ++L+ +YV  G+++ + +  +G +  D+ +W A
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ-RTKSIHPFVIKL 578
           M++     G    A+ +F  L + G KP+E+   +ILN CAA  A   + K  H F IK 
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
             ++ + V+SA++  YAK G+I+ A   F +     D++ +N++I  YA HG   +A+++
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKALDV 583

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F +MK   ++    TF+ V +AC+H GLV++G   F  M     + P+ +   C+VD+ S
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G LE A  VIE MP     T++R++L+ CR+H   ELG  A+EK++ + P++ AA+VL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703

Query: 759 LS 760
           LS
Sbjct: 704 LS 705



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/610 (25%), Positives = 275/610 (45%), Gaps = 21/610 (3%)

Query: 25  IHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN 84
           IHRL G    CS           +  L +S  L   + G Q+H   +K GF +D+ +  +
Sbjct: 84  IHRL-GMEMDCS---------IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTS 133

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           L+  Y K   F  G +VFDEM ERN+V+WT ++S   +N   D  L +++ M+  G  PN
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
            F   + + V    G    G  +H   +K  ++K   V  S++N Y K G+V  A  +F 
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
                 V  WN+MI GYA  G   EAL +  SM    + + + +F + ++ C+ + +   
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFS 323
             Q+H  +++       +I  AL+  Y K + M  A ++F+ +    +V+SW  +  GF 
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +N    +   LF +    G RPN  T+S++L     +   ++  Q+    +   +     
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV----VKTNYERSST 429

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++L+  + + G VE A  VF  +  K+I  W+ +L+GY         +K F  + + G
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489

Query: 444 VEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           ++ N  TF  ++  C  +      G Q HG  IK+   S   + S+L+  Y   G ++++
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            E        D+ SW +M+S     G   +A+ +F  + +   K D      +  +C   
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609

Query: 563 GAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           G  +  +     ++   K+    E    S ++D Y++ G ++ A    +   N     ++
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKE--HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667

Query: 620 NTLIMAYAHH 629
            T++ A   H
Sbjct: 668 RTILAACRVH 677



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 143/575 (24%), Positives = 268/575 (46%), Gaps = 16/575 (2%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA-----AERVFYSISSDDVGCWNAMIGG 220
           S+  F  K RI  N   G + +  Y   G V++     A  +F      D   + +++ G
Sbjct: 12  SLENFKPKFRIYAN---GVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFG 67

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           ++  G   EA  +  ++   G+ MD   F + L+  + + D   GRQ+H   I+      
Sbjct: 68  FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +S+  +L+D Y+K S      KVF+ M +++V++W TL  G++ N    +  +LF +   
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G++PN  TF+  L    +      GLQ+  + +  G      V++SLI ++ +CG V  
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  +FD    K++ TWN ++SGY  N  D + L  F ++  + V ++  +F  V++ C  
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGA 519
            +  +   Q+H +++K GF     I ++L+ +Y      LD    F       ++ SW A
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+S  +      EAV +F  +   G +P+E+    IL +   I   +    +H  V+K  
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTN 423

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           +     V +A++DAY K G ++ A   F    +  D++ ++ ++  YA  G    A+++F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVF-SGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            ++    ++P++ TF S+++ C+           F     +  +  S      L+ M ++
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            G +E A+ V +    +     + S++SG   HG 
Sbjct: 543 KGNIESAEEVFK-RQREKDLVSWNSMISGYAQHGQ 576


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 187/582 (32%), Positives = 296/582 (50%), Gaps = 1/582 (0%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + FVG S++  YA+ G +  A R+F  + + D   WN M+ G+  CG    A+ V   M 
Sbjct: 6   DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
                 +  TF + L  C+  A  + G Q+HGL+I         + NAL+ MY K   + 
Sbjct: 66  NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A K+F  M D +V++WN +  GF +N    + + LF + I +G  P+ +TF+  L    
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +   L  G ++    L  G   +  + S+LI ++ +C  V MA  +F   +  +I     
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++SGY  N  + D L+ F  + E  +  N  T   V+  C       +  ++H  I+K G
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                ++ S+++  Y   G+LD +++        D   W A+++     G   EA+ +F 
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G   D   +   L++CA + A    K+IH F+IK  F++EV+  SA+ID Y KCG
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCG 425

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           ++  AR  FD     N+V  +N++I AY  HG +  ++ +F KM    +QP   TF++++
Sbjct: 426 NLSVARCVFDMMREKNEV-SWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC H G VDKG   F+ M  +YG+    + Y C+VD+  R G L +A   I+ MPF P 
Sbjct: 485 SACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPD 544

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ +LL  CR+HGN EL E AS  LL L P+N   +VLLS
Sbjct: 545 DGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLS 586



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/626 (26%), Positives = 292/626 (46%), Gaps = 23/626 (3%)

Query: 73  LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
           +GF  D F+ ++LI +Y++ G      R+FD+M  ++ V W ++++  ++ GE +  +K+
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           + DM+     PN     SV+ +C S   SEFG  +H   +      +P V  +++  Y+K
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
            G ++ A ++F ++   +V  WN MI G+   G+  EA  + S M+  G++ D  TF + 
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L   +  A    G++IHG I+R  +   + + +ALID+Y K   +  A K+F++  + D+
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDI 240

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +    +  G+  N        +F   +     PN VT + +L  C  L  L+LG +L   
Sbjct: 241 VVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            L  G  +  +V S+++ M+ +CG +++A+ +F  +  K+   WN +++    N    + 
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           +  F  +   G+  +  +    +  C           IH  +IK  F S  +  S+LI  
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L  +    +     +  SW ++++A    GH   ++ +FH ++E G +PD    
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            TIL++C   G  Q  K I  F       TE Y   A ++ YA   D+ G     +++F 
Sbjct: 481 LTILSACGHAG--QVDKGIQYFRCM----TEEYGIPARMEHYACIVDLFGRAGRLNEAFE 534

Query: 613 -------SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA----TFVSVMSAC 661
                  S D  V+ TL+ A   HG V E  E+  +  L +L P  +       +V +  
Sbjct: 535 TIKNMPFSPDDGVWGTLLGACRVHGNV-ELAEVASRC-LLDLDPENSGCYVLLSNVHADA 592

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSP 687
              G V K     +S+  + G+Q  P
Sbjct: 593 GQWGSVRK----IRSLMKKRGVQKVP 614



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 232/491 (47%), Gaps = 14/491 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + + I  A  LS+  +      G Q+HG ++  GF  D  + N L+AMYSK G     L+
Sbjct: 70  KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALK 129

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F+ M + N+V+W  +++  +QNG  D    ++ +M + G  P+     S +       +
Sbjct: 130 LFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESAS 189

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  IH + L+  I  + F+  ++++ Y K  DV  A ++F   ++ D+    A+I G
Sbjct: 190 LKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISG 249

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G   +AL +   +L E ++ +  T  + L  C+ +A  ++G+++H  I++  ++  
Sbjct: 250 YVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDER 309

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + +A++DMY K   +D A+++F RM +KD + WN +    S+N  P +   LF +   
Sbjct: 310 RHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGR 369

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G   + V+ S  L  C  L  L  G  +    +   F  E    S+LI M+ +CG + +
Sbjct: 370 EGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSV 429

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VFD +  KN  +WN +++ Y  +      L  F  + E G++ +  TF  ++  C  
Sbjct: 430 ARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGH 489

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV-------NFGQLDNSFE-FSNGAERL 512
           +      GQ+   I      +  Y   + ++ Y          G+L+ +FE   N     
Sbjct: 490 A------GQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSP 543

Query: 513 DMASWGAMMSA 523
           D   WG ++ A
Sbjct: 544 DDGVWGTLLGA 554



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 2/183 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D + ++ +LS   NL +   G  +H  ++K  F +++F ++ LI MY KCG      
Sbjct: 372 LSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVAR 431

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD M E+N VSW  I++A   +G  ++ L ++  M  +G  P+     +++  C   G
Sbjct: 432 CVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAG 491

Query: 160 ASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAM 217
             + G     C   +  I         +++ + + G +  A     ++  S D G W  +
Sbjct: 492 QVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTL 551

Query: 218 IGG 220
           +G 
Sbjct: 552 LGA 554


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 205/701 (29%), Positives = 336/701 (47%), Gaps = 11/701 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH  ++  G  +     + ++ +Y  CG F     +F E+  R  + W  ++      G
Sbjct: 32  QVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLG 91

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            FD  L  Y  M  +   P+++    V+K C  +        +H  A  +    + F G 
Sbjct: 92  WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGS 151

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  YA  G +  A RVF  +   D   WN M+ GY   G    A+     M      +
Sbjct: 152 ALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  T+   L  C+   +F  G Q+HGL+I S  E    + N L+ MY K   + YA K+F
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M   D ++WN L  G+ +N    + A LF+  I +G +P+ VTF+  L        L+
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI-----LE 326

Query: 365 LGLQLQCLALHCGFLDEE-----NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            G    C  +H   +         + S+LI ++ + G VEMA  +F      ++     +
Sbjct: 327 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAM 386

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SGY  +  + D + TF  + + G+  N  T   V+  C      +   ++H  I+K   
Sbjct: 387 ISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRL 446

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            +   + S++   Y   G+LD ++EF       D   W +M+S+    G    A+ +F  
Sbjct: 447 ENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQ 506

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  +G K D   L + L++ A + A    K +H +VI+  F+++ +VAS +ID Y+KCG+
Sbjct: 507 MGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGN 566

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  A   F+     N+V  +N++I AY +HG   E ++++ +M  A + P   TF+ ++S
Sbjct: 567 LALAWCVFNLMDGKNEV-SWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIIS 625

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H GLVD+G   F  M  +YG+    + Y C+VD+  R G + +A   I+ MPF P  
Sbjct: 626 ACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDA 685

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ +LL  CR+HGN EL + AS  LL L PKN   +VLLS
Sbjct: 686 GVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLS 726



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 239/507 (47%), Gaps = 33/507 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GTQ+HG ++  GF  D  + N L+AMYSKCG   +  ++F+ M + + V+W  +++  +Q
Sbjct: 232 GTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQ 291

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  D    ++  M + G  P+     S +   +  G+      +H + ++ R+  + ++
Sbjct: 292 NGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYL 351

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y K GDV  A ++F      DV    AMI GY   G   +A+N    ++ EG+
Sbjct: 352 KSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGM 411

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  T  + L  C+ VA    G+++H  I++  +E  +++ +A+ DMY K   +D A++
Sbjct: 412 VTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYE 471

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            F RM+D+D + WN++   FS+N  P     LF +  +SG++ + V+ S  L     L  
Sbjct: 472 FFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPA 531

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++    +   F  +  V S+LI M+ +CG + +A  VF+ +  KN  +WN +++ 
Sbjct: 532 LYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAA 591

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  + C  + L  +  +  +G+  +  TF  ++  C            H  ++  G    
Sbjct: 592 YGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACG-----------HAGLVDEGIHY- 639

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            + C +               E+  GA    M  +  M+      G  HEA   F ++  
Sbjct: 640 -FHCMTR--------------EYGIGAR---MEHYACMVDLYGRAGRVHEA---FDTIKS 678

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTK 569
               PD  + GT+L +C   G  +  K
Sbjct: 679 MPFTPDAGVWGTLLGACRLHGNVELAK 705



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 161/385 (41%), Gaps = 11/385 (2%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L R C     +    Q+    +  G  D    +S ++ ++  CG    A ++F  +  + 
Sbjct: 17  LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRY 76

Query: 413 ITTWNELLSG-YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
              WN ++ G Y     D  +L  F  +  S V  +  TF YV++ C    N  +   +H
Sbjct: 77  ALPWNWMIRGLYMLGWFDFALLFYF-KMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVH 135

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
                 GF    +  S+LIK Y + G + ++    +     D   W  M+   V  G   
Sbjct: 136 DTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFD 195

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            A+  F  +  +    +      IL+ CA  G +     +H  VI  GF  +  VA+ ++
Sbjct: 196 NAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLV 255

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             Y+KCG++  AR  F+ +    D + +N LI  Y  +G   EA  +F+ M  A ++P  
Sbjct: 256 AMYSKCGNLLYARKLFN-TMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 314

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP-DCY--GCLVDMLSRNGYLEDAKH 708
            TF S + +    G + + C   K + S       P D Y    L+D+  + G +E A+ 
Sbjct: 315 VTFASFLPSILESGSL-RHC---KEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARK 370

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHG 733
           + +         V  +++SG  +HG
Sbjct: 371 IFQ-QNILVDVAVCTAMISGYVLHG 394



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 2/167 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL +   G ++HG++++  F++D F+ + LI MYSKCG       VF+ M  +N VSW  
Sbjct: 528 NLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNS 587

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG-YSIHCFALKI 174
           I++A   +G     L +Y +M   G  P+      ++  C   G  + G +  HC   + 
Sbjct: 588 IIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREY 647

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            I         +++ Y + G V  A     S+  + D G W  ++G 
Sbjct: 648 GIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGA 694



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 2/165 (1%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L ++  +C+     Q+ + +H  VI  G       +S V+  Y  CG  + A   F +  
Sbjct: 14  LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFE-L 72

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
                + +N +I      G    A+  + KM  +N+ P + TF  V+ AC     V   C
Sbjct: 73  ELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL-C 131

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++        G          L+ + + NGY+ DA+ V + +P +
Sbjct: 132 MVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLR 176


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 344/684 (50%), Gaps = 1/684 (0%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D    N ++  YS  G     + +FD M + ++VSW  +VS   Q G F   + ++V+M
Sbjct: 123 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 182

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
              G  P+      ++K C ++     G  +H  A+K  +E +   G ++++ Y K   +
Sbjct: 183 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 242

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A   FY +   +   W A I G          L +   M   G+ + + ++ +A + C
Sbjct: 243 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 302

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++  + GRQ+H   I+++      +  A++D+Y K++ +  A + F  + +  V + N
Sbjct: 303 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 362

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G        +   LF   I S  R + V+ S +   C +      G Q+ CLA+  
Sbjct: 363 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 422

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +  V ++++ ++ +C A+  A+ +F  +  K+  +WN +++    N    D +  F
Sbjct: 423 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 482

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G++ +  T+  V++ C    + +    +H  +IK+G  S  ++ S+++  Y   
Sbjct: 483 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 542

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D + +  +      + SW A++S       + EA   F  +++ G KPD +   T+L
Sbjct: 543 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 602

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++CA +   +  K IH  +IK     + Y++S ++D YAKCGD+  + + F++     D 
Sbjct: 603 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK-VEKRDF 661

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I  YA HGL  EA+ +F++M+  N+ P+ ATFV+V+ ACSH GL D GC  F  
Sbjct: 662 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 721

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M + Y ++P  + + C+VD+L R+   ++A   I  MPFQ    ++++LLS C+I  + E
Sbjct: 722 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 781

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           + E A+  +LLL P + + ++LLS
Sbjct: 782 IAELAASNVLLLDPDDSSVYILLS 805



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 252/519 (48%), Gaps = 3/519 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L KS S  E L    LG QVH   VK G   D+   + L+ MY KC      L  F  M 
Sbjct: 197 LLKSCSALEELS---LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 253

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN VSW   ++  +QN ++  GL+++++M+  G   ++ +  S  + C +M     G  
Sbjct: 254 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 313

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H  A+K +   +  VG ++++ YAK   +  A R F+ + +  V   NAM+ G    G 
Sbjct: 314 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 373

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G EA+ +   M+   I  D  +       C+    +  G+Q+H L I+S  +  I + NA
Sbjct: 374 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 433

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++D+Y K   +  A+ +F+ M  KD +SWN +     +N +   T   F++ +  G +P+
Sbjct: 434 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 493

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T+  +L+ C  L  L+ GL +    +  G   +  V S+++ M+C+CG ++ A  + D
Sbjct: 494 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 553

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  + + +WN +LSG+  N    +  K F  + + G++ +  TF  V++TC      ++
Sbjct: 554 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 613

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIHG IIK       YI S+L+  Y   G + +S       E+ D  SW AM+     
Sbjct: 614 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 673

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            G   EA+ +F  + +    P+      +L +C+ +G +
Sbjct: 674 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 712



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 265/587 (45%), Gaps = 40/587 (6%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--------------- 225
           FV   +L  YA+    A A RVF ++   D   WN M+  Y+H G               
Sbjct: 95  FVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP 154

Query: 226 ---------YGF-------EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
                     G+       E++++   M   G++ D+ TF   L+ CS + +  +G Q+H
Sbjct: 155 DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVH 214

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            L +++ +E  +   +AL+DMY K   +D A   F  M +++ +SW     G  +N+   
Sbjct: 215 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYV 274

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF +    G   +  +++   R C  +  L+ G QL   A+   F  +  V ++++
Sbjct: 275 RGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIV 334

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ +  ++  A   F  +    + T N ++ G        + +  F  +  S +  +  
Sbjct: 335 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 394

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           +   V   C  ++      Q+H   IK+GF     + ++++  Y     L  ++    G 
Sbjct: 395 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 454

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           ++ D  SW A+++AL   GH  + +  F+ ++  G KPD++  G++L +CAA+ + +   
Sbjct: 455 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 514

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +H  VIK G  ++ +VAS V+D Y KCG I  A+   D+      V+ +N ++  ++ +
Sbjct: 515 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR-IGGQQVVSWNAILSGFSLN 573

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD- 688
               EA + F +M    L+P   TF +V+  C++   ++ G    K +  Q   Q   D 
Sbjct: 574 KESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG----KQIHGQIIKQEMLDD 629

Query: 689 --CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
                 LVDM ++ G + D+  V E +  +     + +++ G  +HG
Sbjct: 630 EYISSTLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHG 675



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 2/391 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           QF   S +R D + L+   S     K    G QVH   +K GF  DI + N ++ +Y KC
Sbjct: 382 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKC 441

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   +F  M +++ VSW  I++A  QNG +D  +  + +M   G  P++F  GSV+
Sbjct: 442 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 501

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++ + E+G  +H   +K  +  + FV  +V++ Y K G +  A+++   I    V 
Sbjct: 502 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 561

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WNA++ G++      EA    S ML  G+  D +TF   L  C+ +A  ++G+QIHG I
Sbjct: 562 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 621

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+     I + L+DMY K   M  +  VFE++  +D +SWN +  G++ +    +  
Sbjct: 622 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 681

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
            +F +       PNH TF  +LR C  +   D G +    +  H     +    + ++ +
Sbjct: 682 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 741

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
             R    + A    +++ ++ +   W  LLS
Sbjct: 742 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 218/485 (44%), Gaps = 34/485 (7%)

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN-------------KNPG 329
           + N L+ MY + +G   A +VF+ M  +D +SWNT+   +S                +P 
Sbjct: 96  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 155

Query: 330 ------------------QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
                             ++  LF +    G  P+  TF++LL+ C  L +L LG+Q+  
Sbjct: 156 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 215

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           LA+  G   +    S+L+ M+ +C +++ A   F  +  +N  +W   ++G   N     
Sbjct: 216 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 275

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+ F  +   G+ V+  ++     +C          Q+H   IK  FSS   + ++++ 
Sbjct: 276 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 335

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y     L ++     G     + +  AMM  LV  G   EA+ +F  ++ +  + D   
Sbjct: 336 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 395

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L  + ++CA    Y + + +H   IK GF+ ++ V +AV+D Y KC  +  A + F Q  
Sbjct: 396 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIF-QGM 454

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              D + +N +I A   +G   + +  F++M    ++P   T+ SV+ AC+    ++ G 
Sbjct: 455 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 514

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           ++   +  + G+         +VDM  + G +++A+ + + +  Q   + + ++LSG  +
Sbjct: 515 MVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSL 572

Query: 732 HGNKE 736
           +   E
Sbjct: 573 NKESE 577



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 182/469 (38%), Gaps = 69/469 (14%)

Query: 345 PNHVTFSILLRQC---GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           P  VTFS + + C   G+            + +  GF+    V++ L+ M+ RC     A
Sbjct: 55  PARVTFSRVFQSCAQAGREALAAGRAAHARMVV-SGFVPTAFVSNCLLQMYARCAGAACA 113

Query: 402 HSVFDNVSYKNITTWNELL-------------------------------SGYCFNCCDA 430
             VFD +  ++  +WN +L                               SGYC      
Sbjct: 114 RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 173

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F  +   GV  +  TF  ++++C   E   +  Q+H   +KTG        S+L+
Sbjct: 174 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALV 233

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y     LD++  F  G    +  SWGA ++  V        + +F  +   G    + 
Sbjct: 234 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 293

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              +   SCAA+      + +H   IK  F+++  V +A++D YAK   +  AR AF   
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF-FG 352

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
             ++ V   N +++     GL  EAM +F  M  ++++    +   V SAC+      +G
Sbjct: 353 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 412

Query: 671 ----CLLFKS----------------------MDS----QYGMQPSPDCYGCLVDMLSRN 700
               CL  KS                      M++    Q   Q     +  ++  L +N
Sbjct: 413 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 472

Query: 701 GYLEDA-KHVIEIMPF--QPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           G+ +D   H  E++ F  +P    Y S+L  C    + E G    +K++
Sbjct: 473 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 521


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 200/685 (29%), Positives = 344/685 (50%), Gaps = 14/685 (2%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           +Q++LI  +SK   F    +VF +    N+  W  I++ A++N  +     ++ +M  NG
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEM-CNG 67

Query: 141 FM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           F  P+ +   SV+  C S+    FG  +    +K   E + FV  S+++ YAK G +A A
Sbjct: 68  FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEA 126

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             VF  IS+  V  W  M+ GY      F AL +   M   G+ ++  T  + +  C   
Sbjct: 127 REVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRP 186

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD---KDVISWN 316
           +      Q+H  + +S      S+  ALI M  KS  ++ + +VFE + D   ++++  N
Sbjct: 187 SMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--N 244

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD-LDLGLQLQCLALH 375
            +   FS+NK PG+   LF + +  G  P+  +   LL     +LD L+LG Q+    L 
Sbjct: 245 VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL----SVLDCLNLGKQVHSYTLK 300

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G + +  V SSL  M+ +CG++E ++S+F  + +K+   W  ++SG+       + +  
Sbjct: 301 SGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGL 360

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  + + G   +  T   V+  C    +     +IHG  ++ G      + S+L+ +Y  
Sbjct: 361 FSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSK 420

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G L  + +  +    +D  S  +++S     G   +   +F  +V +G   D Y + +I
Sbjct: 421 CGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSI 480

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L +       +    +H ++ K+G  TE  V S+++  Y+K G I+    AF Q  N  D
Sbjct: 481 LKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQ-INGPD 539

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           +I +  LI +YA HG  +EA++++  MK    +P + TFV V+SACSH GLV++G     
Sbjct: 540 LIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLN 599

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           SM   YG++P    Y C+VD L R+G L +A++ I   P +P   V+ +LL+ C+I+G+ 
Sbjct: 600 SMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDV 659

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLS 760
           ELG+ A++K + L P +  A+V LS
Sbjct: 660 ELGKLAAKKAIELEPSDAGAYVSLS 684



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/673 (22%), Positives = 313/673 (46%), Gaps = 33/673 (4%)

Query: 26  HRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           H +C       + F + D    +  L+   +L+    G  V   ++K G   D+F+  ++
Sbjct: 62  HEMC-------NGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSI 113

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           + +Y+KCG+      VF  ++  ++VSWT+++S   ++ +    L+++ +M+ +G   N 
Sbjct: 114 VDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINS 173

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
             V SV+  C           +H +  K     +  V  ++++  +K GD+  +ERVF  
Sbjct: 174 CTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFED 233

Query: 206 ISSDDV---GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           +  DD+      N M+  ++      +A+ + + ML EG+  D+++       CSL++  
Sbjct: 234 L--DDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSV------CSLLSVL 285

Query: 263 D---IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           D   +G+Q+H   ++S +   +++ ++L  MY K   ++ ++ +F+ +  KD   W ++ 
Sbjct: 286 DCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMI 345

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF+E     +   LF + +  G+ P+  T + +L  C  L  L    ++    L  G  
Sbjct: 346 SGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGID 405

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               + S+L+  + +CG++++A  V+D +   +  + + L+SGY  +    D    F ++
Sbjct: 406 RGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDM 465

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             SG  ++      +++    SE  ++  Q+H  I K G  +   + SSL+  Y  FG +
Sbjct: 466 VMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 525

Query: 500 DN---SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           ++   +F   NG    D+ +W A++++    G  +EA+ ++  + E G KPD+     +L
Sbjct: 526 EDCCKAFSQINGP---DLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVL 582

Query: 557 NSCAAIGAYQRTK-SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           ++C+  G  +     ++  V   G   E      ++DA  + G ++ A    +      D
Sbjct: 583 SACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPD 642

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLF 674
            +V+ TL+ A   +G V   +      K   L+PS A  +VS+ +  +  G  D+     
Sbjct: 643 ALVWGTLLAACKIYGDVE--LGKLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETR 700

Query: 675 KSMDSQYGMQPSP 687
           K M    G+Q  P
Sbjct: 701 KLMKGT-GVQKEP 712



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 157/361 (43%), Gaps = 14/361 (3%)

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G+   E V SSLI  F +    E A+ VF +    N+  WN +++G   N     V   F
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +     + +  T+  V+  C   E  +    +   +IK G     ++C+S++  Y   
Sbjct: 62  HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDV-FVCTSIVDLYAKC 120

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +  + E  +      + SW  M+S          A+ IF  +  +G + +   + +++
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++C           +H +V K GF  +  VA+A+I   +K GDI  +   F+   +    
Sbjct: 181 SACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQ 240

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL-LFK 675
            + N ++ +++ +    +A+ +F +M    L P +       S CS   ++D  CL L K
Sbjct: 241 NIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDE------FSVCSLLSVLD--CLNLGK 292

Query: 676 SMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
            + S   + G+         L  M S+ G LE++  + + +PF+ +   + S++SG   +
Sbjct: 293 QVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDN-ACWASMISGFNEY 351

Query: 733 G 733
           G
Sbjct: 352 G 352


>gi|6735376|emb|CAB68197.1| putative protein [Arabidopsis thaliana]
          Length = 810

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 198/685 (28%), Positives = 339/685 (49%), Gaps = 43/685 (6%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +++ NN+I++Y K G      +VFD+M ERN VS+  I+    + G+ D    ++ +M+ 
Sbjct: 118 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 177

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVA 197
            G++PN+  V  ++  C S+     G  +H  +LK  +   + FVG  +L  Y +L  + 
Sbjct: 178 FGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 235

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            AE+VF  +    +  WN M+    H G+  E +     ++  G ++ + +F+  L+G S
Sbjct: 236 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 295

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            V D DI +Q+H    +  ++C IS+VN+LI  Y K      A ++F+     D++SWN 
Sbjct: 296 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 355

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +    ++++NP +   LF      G  PN  T+  +L     +  L  G Q+  + +  G
Sbjct: 356 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 415

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 + ++LI  + +CG +E +   FD +  KNI  WN LLSGY  N      L  F 
Sbjct: 416 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 474

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-- 495
            + + G      TF   +++CC +E QQ+    H  I++ G+    Y+ SSL++SY    
Sbjct: 475 QMLQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQ 530

Query: 496 ------------------------------FGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                                          GQ   S +  +  E+ D  SW   ++A  
Sbjct: 531 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 590

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEV 584
              ++ E + +F  ++++  +PD+Y   +IL+ C+ +       SIH  + K  F+  + 
Sbjct: 591 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 650

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V + +ID Y KCG I+     F+++   N +I +  LI     HG   EA+E F +   
Sbjct: 651 FVCNVLIDMYGKCGSIRSVMKVFEETREKN-LITWTALISCLGIHGYGQEALEKFKETLS 709

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
              +P + +F+S+++AC H G+V +G  LF+ M   YG++P  D Y C VD+L+RNGYL+
Sbjct: 710 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLK 768

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGC 729
           +A+H+I  MPF     V+R+ L GC
Sbjct: 769 EAEHLIREMPFPADAPVWRTFLDGC 793



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 262/595 (44%), Gaps = 39/595 (6%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           GTQ+HG  +K G F  D F+   L+ +Y +        +VF++M  ++L +W  ++S   
Sbjct: 201 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 260

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     +  + ++   G    E +   V+K    +   +    +HC A K  ++    
Sbjct: 261 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 320

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y K G+   AER+F    S D+  WNA+I   A      +AL +  SM   G
Sbjct: 321 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 380

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + ++ T+++ L   SLV     GRQIHG++I++  E  I + NALID Y K   ++ + 
Sbjct: 381 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 440

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + DK+++ WN L  G++ NK+     SLF + +  G RP   TFS  L+ C  + 
Sbjct: 441 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VT 498

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIY------------------------------- 390
           +L    QL  + +  G+ D + V SSL+                                
Sbjct: 499 ELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 555

Query: 391 -MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ R G    +  +   +   +  +WN  ++    +    +V++ F ++ +S +  +  
Sbjct: 556 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 615

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
           TF  ++  C +  +  +   IHG I KT FS    ++C+ LI  Y   G + +  +    
Sbjct: 616 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 675

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               ++ +W A++S L   G+  EA+  F   +  G KPD     +IL +C   G  +  
Sbjct: 676 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 735

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             +   +   G   E+      +D  A+ G +K A     +     D  V+ T +
Sbjct: 736 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 790



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 49/450 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +  Q+H    K G   +I + N+LI+ Y KCG      R+F +    ++VSW  I+ A  
Sbjct: 302 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 361

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      LK++V M  +GF PN+    SV+ V   +     G  IH   +K   E    
Sbjct: 362 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 421

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++FYAK G++  +   F  I   ++ CWNA++ GYA+   G   L++   ML  G
Sbjct: 422 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG 480

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
               +YTF  AL+ C +       +Q+H +I+R   E +  ++++L+  Y K+  M+ A 
Sbjct: 481 FRPTEYTFSTALKSCCVTE----LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 536

Query: 302 --------------------------------KVFERMADKDVISWNTLFGGFSENKNPG 329
                                           K+   +   D +SWN      S +    
Sbjct: 537 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 596

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSL 388
           +   LF   + S  RP+  TF  +L  C KL DL LG  +  L     F   +  V + L
Sbjct: 597 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 656

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +CG++     VF+    KN+ TW  L+S    +    + L+ F      G + + 
Sbjct: 657 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 716

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
            +F  ++ T CR          HG ++K G
Sbjct: 717 VSFISIL-TACR----------HGGMVKEG 735



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 205/416 (49%), Gaps = 9/416 (2%)

Query: 250 INALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           ++ L  C     F   + +H L I   S +   + + N +I +Y K   +  A KVF++M
Sbjct: 85  VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 144

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            +++ +S+NT+  G+S+  +  +   +F +    G  PN  T S LL  C  L D+  G 
Sbjct: 145 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGT 202

Query: 368 QLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           QL  L+L  G F+ +  V + L+ ++ R   +EMA  VF+++ +K++ TWN ++S     
Sbjct: 203 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 262

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + +  F  +   G  +   +F  V++     ++  +  Q+H +  K G      + 
Sbjct: 263 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 322

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SLI +Y   G    +      A   D+ SW A++ A     +  +A+ +F S+ E G  
Sbjct: 323 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 382

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P++    ++L   + +      + IH  +IK G  T + + +A+ID YAKCG+++ +R+ 
Sbjct: 383 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 442

Query: 607 FDQSFNSNDVIVYNTLIMAYAHH-GLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           FD   + N ++ +N L+  YA+  G +   + +F +M     +P++ TF + + +C
Sbjct: 443 FDYIRDKN-IVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSC 495



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFG 96
           S +R D       LSL   L    LG+ +HG I K  F+  D F+ N LI MY KCG   
Sbjct: 608 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 667

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             ++VF+E  E+NL++WT ++S    +G     L+ + +  + GF P+  +  S++  C 
Sbjct: 668 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 727

Query: 157 SMGASEFG 164
             G  + G
Sbjct: 728 HGGMVKEG 735


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 344/684 (50%), Gaps = 1/684 (0%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D    N ++  YS  G     + +FD M + ++VSW  +VS   Q G F   + ++V+M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
              G  P+      ++K C ++     G  +H  A+K  +E +   G ++++ Y K   +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A   FY +   +   W A I G          L +   M   G+ + + ++ +A + C
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++  + GRQ+H   I+++      +  A++D+Y K++ +  A + F  + +  V + N
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 320

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G        +   LF   I S  R + V+ S +   C +      G Q+ CLA+  
Sbjct: 321 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +  V ++++ ++ +C A+  A+ +F  +  K+  +WN +++    N    D +  F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G++ +  T+  V++ C    + +    +H  +IK+G  S  ++ S+++  Y   
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D + +  +      + SW A++S       + EA   F  +++ G KPD +   T+L
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++CA +   +  K IH  +IK     + Y++S ++D YAKCGD+  + + F++     D 
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK-VEKRDF 619

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I  YA HGL  EA+ +F++M+  N+ P+ ATFV+V+ ACSH GL D GC  F  
Sbjct: 620 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M + Y ++P  + + C+VD+L R+   ++A   I  MPFQ    ++++LLS C+I  + E
Sbjct: 680 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 739

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           + E A+  +LLL P + + ++LLS
Sbjct: 740 IAELAASNVLLLDPDDSSVYILLS 763



 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 252/519 (48%), Gaps = 3/519 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L KS S  E L    LG QVH   VK G   D+   + L+ MY KC      L  F  M 
Sbjct: 155 LLKSCSALEELS---LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 211

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN VSW   ++  +QN ++  GL+++++M+  G   ++ +  S  + C +M     G  
Sbjct: 212 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H  A+K +   +  VG ++++ YAK   +  A R F+ + +  V   NAM+ G    G 
Sbjct: 272 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 331

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G EA+ +   M+   I  D  +       C+    +  G+Q+H L I+S  +  I + NA
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++D+Y K   +  A+ +F+ M  KD +SWN +     +N +   T   F++ +  G +P+
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T+  +L+ C  L  L+ GL +    +  G   +  V S+++ M+C+CG ++ A  + D
Sbjct: 452 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  + + +WN +LSG+  N    +  K F  + + G++ +  TF  V++TC      ++
Sbjct: 512 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIHG IIK       YI S+L+  Y   G + +S       E+ D  SW AM+     
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            G   EA+ +F  + +    P+      +L +C+ +G +
Sbjct: 632 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/589 (23%), Positives = 266/589 (45%), Gaps = 40/589 (6%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG------------- 225
           N FV   +L  YA+    A A RVF ++   D   WN M+  Y+H G             
Sbjct: 51  NAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMP 110

Query: 226 -----------YGF-------EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
                       G+       E++++   M   G++ D+ TF   L+ CS + +  +G Q
Sbjct: 111 DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQ 170

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H L +++ +E  +   +AL+DMY K   +D A   F  M +++ +SW     G  +N+ 
Sbjct: 171 VHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQ 230

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +   LF +    G   +  +++   R C  +  L+ G QL   A+   F  +  V ++
Sbjct: 231 YVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTA 290

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           ++ ++ +  ++  A   F  +    + T N ++ G        + +  F  +  S +  +
Sbjct: 291 IVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFD 350

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             +   V   C  ++      Q+H   IK+GF     + ++++  Y     L  ++    
Sbjct: 351 VVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQ 410

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           G ++ D  SW A+++AL   GH  + +  F+ ++  G KPD++  G++L +CAA+ + + 
Sbjct: 411 GMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY 470

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              +H  VIK G  ++ +VAS V+D Y KCG I  A+   D+      V+ +N ++  ++
Sbjct: 471 GLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR-IGGQQVVSWNAILSGFS 529

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +    EA + F +M    L+P   TF +V+  C++   ++ G    K +  Q   Q   
Sbjct: 530 LNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG----KQIHGQIIKQEML 585

Query: 688 D---CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           D       LVDM ++ G + D+  V E +  +     + +++ G  +HG
Sbjct: 586 DDEYISSTLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHG 633



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 2/391 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           QF   S +R D + L+   S     K    G QVH   +K GF  DI + N ++ +Y KC
Sbjct: 340 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKC 399

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   +F  M +++ VSW  I++A  QNG +D  +  + +M   G  P++F  GSV+
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++ + E+G  +H   +K  +  + FV  +V++ Y K G +  A+++   I    V 
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WNA++ G++      EA    S ML  G+  D +TF   L  C+ +A  ++G+QIHG I
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 579

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+     I + L+DMY K   M  +  VFE++  +D +SWN +  G++ +    +  
Sbjct: 580 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 639

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
            +F +       PNH TF  +LR C  +   D G +    +  H     +    + ++ +
Sbjct: 640 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 699

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
             R    + A    +++ ++ +   W  LLS
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 218/485 (44%), Gaps = 34/485 (7%)

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN-------------KNPG 329
           + N L+ MY + +G   A +VF+ M  +D +SWNT+   +S                +P 
Sbjct: 54  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113

Query: 330 ------------------QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
                             ++  LF +    G  P+  TF++LL+ C  L +L LG+Q+  
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           LA+  G   +    S+L+ M+ +C +++ A   F  +  +N  +W   ++G   N     
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 233

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+ F  +   G+ V+  ++     +C          Q+H   IK  FSS   + ++++ 
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 293

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y     L ++     G     + +  AMM  LV  G   EA+ +F  ++ +  + D   
Sbjct: 294 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 353

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L  + ++CA    Y + + +H   IK GF+ ++ V +AV+D Y KC  +  A + F Q  
Sbjct: 354 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIF-QGM 412

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              D + +N +I A   +G   + +  F++M    ++P   T+ SV+ AC+    ++ G 
Sbjct: 413 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           ++   +  + G+         +VDM  + G +++A+ + + +  Q   + + ++LSG  +
Sbjct: 473 MVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSL 530

Query: 732 HGNKE 736
           +   E
Sbjct: 531 NKESE 535



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 182/469 (38%), Gaps = 69/469 (14%)

Query: 345 PNHVTFSILLRQC---GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           P  VTFS + + C   G+            + +  GF+    V++ L+ M+ RC     A
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPNAFVSNCLLQMYARCAGAACA 71

Query: 402 HSVFDNVSYKNITTWNELL-------------------------------SGYCFNCCDA 430
             VFD +  ++  +WN +L                               SGYC      
Sbjct: 72  RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 131

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F  +   GV  +  TF  ++++C   E   +  Q+H   +KTG        S+L+
Sbjct: 132 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y     LD++  F  G    +  SWGA ++  V        + +F  +   G    + 
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              +   SCAA+      + +H   IK  F+++  V +A++D YAK   +  AR AF   
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF-FG 310

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
             ++ V   N +++     GL  EAM +F  M  ++++    +   V SAC+      +G
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370

Query: 671 ----CLLFKS----------------------MDS----QYGMQPSPDCYGCLVDMLSRN 700
               CL  KS                      M++    Q   Q     +  ++  L +N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430

Query: 701 GYLEDA-KHVIEIMPF--QPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           G+ +D   H  E++ F  +P    Y S+L  C    + E G    +K++
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 479


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 214/730 (29%), Positives = 355/730 (48%), Gaps = 16/730 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+HG++VK G  +++F+  +L+  Y   G      ++F+E+ E N+VSWT ++     NG
Sbjct: 270 QIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNG 329

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VG 183
                L +Y  ++ NG +     + +V++ C   G    GY I    +K  ++ +   V 
Sbjct: 330 HTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVA 389

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+++ +     V  A RVF ++   D   WN++I   AH G   E+L     M      
Sbjct: 390 NSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPK 449

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T    L  C        GR +HGLI +S +E ++ + N+L+ MY ++   + A  V
Sbjct: 450 TDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELV 509

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F  M  +D+ISWN++     E+        L  + + +    N+VTF+  L  C  L  L
Sbjct: 510 FHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL 569

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            +   +    +H        + ++L+ M+ + G ++ A  V   +  +++ TWN L+ G+
Sbjct: 570 KI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGH 626

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSC 482
             +      ++ F  +   G+  N  T   ++ TC   +     G  IH  I+  GF   
Sbjct: 627 ADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELD 686

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ SSLI  Y   G L+ S    +     + ++W A+ SA  H G   EA+     +  
Sbjct: 687 TYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRN 746

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G   D++     L +   +      + +H ++IKLGF  + YV +A +D Y KCG+I  
Sbjct: 747 DGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDD 806

Query: 603 A-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             R+       S     +N LI A A HG   +A E F +M    L+P   TFVS++SAC
Sbjct: 807 VFRILPIPKIRSKRS--WNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSAC 864

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLVD+G + F SM S++G+  + +   C++D+L R+G L +A+  I+ MP  P+  V
Sbjct: 865 SHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFV 924

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--RKRQREGNLLDHEGVCNV 779
           +RSLL+ C++HGN ELG  A+++L  L   +D+A+VL S      QR G+      V NV
Sbjct: 925 WRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGD------VENV 978

Query: 780 NDGIKTVDLK 789
              +++  LK
Sbjct: 979 RKQMESQSLK 988



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 170/677 (25%), Positives = 312/677 (46%), Gaps = 13/677 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +H   VK     + F  N L+ MYSK G   +   VFD+M +RN  SW  ++S  +
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKNP 180
           + G +   ++ +  M  NG  P+ + + S++  C   G  +E    IH + +K  +  N 
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S+L+FY   G V+ A ++F  I   ++  W +++  YA  G+  E LN+   +   
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIKSSGMDY 299
           G+     T    ++ C +  D  +G QI G +I+S ++  S+S+ N+LI M+     ++ 
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP--NHVTFSILLRQC 357
           A +VF  M ++D ISWN++    + N    +  SL H F +  + P  +++T S LL  C
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEE--SLGHFFWMRRTHPKTDYITISALLPAC 462

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           G    L  G  L  L    G      V +SL+ M+ + G+ E A  VF  +  +++ +WN
Sbjct: 463 GSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWN 522

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++ +  +   +  +     + ++   +N  TF   +  C   E  ++V   H  +I  
Sbjct: 523 SMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIV---HAFVIHF 579

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                  I ++L+  Y  FG +D + +        D+ +W A++         +  +  F
Sbjct: 580 AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAF 639

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           + +   G   +   +  +L +C +     +    IH  ++  GF  + YV S++I  YA+
Sbjct: 640 NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQ 699

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGD+  +   FD   N N    +N +  A AH+G   EA++   +M+   +   Q +F  
Sbjct: 700 CGDLNTSSYIFDVLANKNSS-TWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSV 758

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            ++   +  ++D+G  L  S   + G +         +DM  + G ++D   ++ I P  
Sbjct: 759 ALATIGNLTVLDEGQQL-HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPI-PKI 816

Query: 717 PSPTVYRSLLSGCRIHG 733
            S   +  L+S    HG
Sbjct: 817 RSKRSWNILISALARHG 833



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 92/195 (47%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H HIV  GF  D ++Q++LI MY++CG       +FD +A +N  +W  I SA   
Sbjct: 671 GMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAH 730

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  +  LK    M+ +G   ++F+    +    ++   + G  +H + +K+  E + +V
Sbjct: 731 YGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYV 790

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             + ++ Y K G++    R+           WN +I   A  G+  +A      ML  G+
Sbjct: 791 LNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGL 850

Query: 243 TMDKYTFINALQGCS 257
             D  TF++ L  CS
Sbjct: 851 KPDHVTFVSLLSACS 865



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 83/205 (40%), Gaps = 37/205 (18%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    + +L+   NL     G Q+H  I+KLGF  D ++ N  + MY KCG      R+ 
Sbjct: 752 DQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRIL 811

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--- 159
                R+  SW +++SA  ++G F    + + +M   G  P+     S++  C   G   
Sbjct: 812 PIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVD 871

Query: 160 ---------ASEFGYSI---HC------------------FALKIRIEKNPFVGCSVLNF 189
                     SEFG      HC                  F  K+ +  N FV  S+L  
Sbjct: 872 EGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAA 931

Query: 190 YAKLGDV----AAAERVFYSISSDD 210
               G++     AA+R+F   SSDD
Sbjct: 932 CKVHGNLELGRKAADRLFELNSSDD 956


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 183/684 (26%), Positives = 344/684 (50%), Gaps = 1/684 (0%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D    N ++  YS  G     + +FD M + ++VSW  +VS   Q G F   + ++V+M
Sbjct: 81  RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
              G  P+      ++K C ++     G  +H  A+K  +E +   G ++++ Y K   +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A   FY +   +   W A I G          L +   M   G+ + + ++ +A + C
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++  + GRQ+H   I+++      +  A++D+Y K++ +  A + F  + +  V + N
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 320

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G        +   LF   I S  R + V+ S +   C +      G Q+ CLA+  
Sbjct: 321 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +  V ++++ ++ +C A+  A+ +F  +  K+  +WN +++    N    D +  F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G++ +  T+  V++ C    + +    +H  +IK+G  S  ++ S+++  Y   
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKC 500

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D + +  +      + SW A++S       + EA   F  +++ G KPD +   T+L
Sbjct: 501 GIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++CA +   +  K IH  +IK     + Y++S ++D YAKCGD+  + + F++     D 
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK-VEKRDF 619

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I  YA HGL  EA+ +F++M+  N+ P+ ATFV+V+ ACSH GL D GC  F  
Sbjct: 620 VSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHL 679

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M + Y ++P  + + C+VD+L R+   ++A   I  MPFQ    ++++LLS C+I  + E
Sbjct: 680 MTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVE 739

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           + E A+  +LLL P + + ++LLS
Sbjct: 740 IAELAASNVLLLDPDDSSVYILLS 763



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 252/519 (48%), Gaps = 3/519 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L KS S  E L    LG QVH   VK G   D+   + L+ MY KC      L  F  M 
Sbjct: 155 LLKSCSALEELS---LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP 211

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN VSW   ++  +QN ++  GL+++++M+  G   ++ +  S  + C +M     G  
Sbjct: 212 ERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQ 271

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H  A+K +   +  VG ++++ YAK   +  A R F+ + +  V   NAM+ G    G 
Sbjct: 272 LHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGL 331

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G EA+ +   M+   I  D  +       C+    +  G+Q+H L I+S  +  I + NA
Sbjct: 332 GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNA 391

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++D+Y K   +  A+ +F+ M  KD +SWN +     +N +   T   F++ +  G +P+
Sbjct: 392 VLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPD 451

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T+  +L+ C  L  L+ GL +    +  G   +  V S+++ M+C+CG ++ A  + D
Sbjct: 452 DFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHD 511

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  + + +WN +LSG+  N    +  K F  + + G++ +  TF  V++TC      ++
Sbjct: 512 RIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIHG IIK       YI S+L+  Y   G + +S       E+ D  SW AM+     
Sbjct: 572 GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYAL 631

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            G   EA+ +F  + +    P+      +L +C+ +G +
Sbjct: 632 HGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 670



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 265/587 (45%), Gaps = 40/587 (6%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--------------- 225
           FV   +L  YA+    A A RVF ++   D   WN M+  Y+H G               
Sbjct: 53  FVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDP 112

Query: 226 ---------YGF-------EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
                     G+       E++++   M   G++ D+ TF   L+ CS + +  +G Q+H
Sbjct: 113 DVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVH 172

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            L +++ +E  +   +AL+DMY K   +D A   F  M +++ +SW     G  +N+   
Sbjct: 173 ALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYV 232

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF +    G   +  +++   R C  +  L+ G QL   A+   F  +  V ++++
Sbjct: 233 RGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIV 292

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ +  ++  A   F  +    + T N ++ G        + +  F  +  S +  +  
Sbjct: 293 DVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVV 352

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           +   V   C  ++      Q+H   IK+GF     + ++++  Y     L  ++    G 
Sbjct: 353 SLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGM 412

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           ++ D  SW A+++AL   GH  + +  F+ ++  G KPD++  G++L +CAA+ + +   
Sbjct: 413 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +H  VIK G  ++ +VAS V+D Y KCG I  A+   D+      V+ +N ++  ++ +
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDR-IGGQQVVSWNAILSGFSLN 531

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD- 688
               EA + F +M    L+P   TF +V+  C++   ++ G    K +  Q   Q   D 
Sbjct: 532 KESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELG----KQIHGQIIKQEMLDD 587

Query: 689 --CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
                 LVDM ++ G + D+  V E +  +     + +++ G  +HG
Sbjct: 588 EYISSTLVDMYAKCGDMPDSLLVFEKVE-KRDFVSWNAMICGYALHG 633



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 190/391 (48%), Gaps = 2/391 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           QF   S +R D + L+   S     K    G QVH   +K GF  DI + N ++ +Y KC
Sbjct: 340 QFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKC 399

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   +F  M +++ VSW  I++A  QNG +D  +  + +M   G  P++F  GSV+
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++ + E+G  +H   +K  +  + FV  +V++ Y K G +  A+++   I    V 
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WNA++ G++      EA    S ML  G+  D +TF   L  C+ +A  ++G+QIHG I
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQI 579

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+     I + L+DMY K   M  +  VFE++  +D +SWN +  G++ +    +  
Sbjct: 580 IKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEAL 639

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
            +F +       PNH TF  +LR C  +   D G +    +  H     +    + ++ +
Sbjct: 640 RMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDI 699

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
             R    + A    +++ ++ +   W  LLS
Sbjct: 700 LGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 218/485 (44%), Gaps = 34/485 (7%)

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN-------------KNPG 329
           + N L+ MY + +G   A +VF+ M  +D +SWNT+   +S                +P 
Sbjct: 54  VSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPD 113

Query: 330 ------------------QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
                             ++  LF +    G  P+  TF++LL+ C  L +L LG+Q+  
Sbjct: 114 VVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHA 173

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           LA+  G   +    S+L+ M+ +C +++ A   F  +  +N  +W   ++G   N     
Sbjct: 174 LAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVR 233

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+ F  +   G+ V+  ++     +C          Q+H   IK  FSS   + ++++ 
Sbjct: 234 GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVD 293

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y     L ++     G     + +  AMM  LV  G   EA+ +F  ++ +  + D   
Sbjct: 294 VYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVS 353

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L  + ++CA    Y + + +H   IK GF+ ++ V +AV+D Y KC  +  A + F Q  
Sbjct: 354 LSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIF-QGM 412

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              D + +N +I A   +G   + +  F++M    ++P   T+ SV+ AC+    ++ G 
Sbjct: 413 KQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           ++   +  + G+         +VDM  + G +++A+ + + +  Q   + + ++LSG  +
Sbjct: 473 MVHDKV-IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSL 530

Query: 732 HGNKE 736
           +   E
Sbjct: 531 NKESE 535



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 182/469 (38%), Gaps = 69/469 (14%)

Query: 345 PNHVTFSILLRQC---GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           P  VTFS + + C   G+            + +  GF+    V++ L+ M+ RC     A
Sbjct: 13  PARVTFSRVFQSCAQAGREALAAGRAAHARMVVS-GFVPTAFVSNCLLQMYARCAGAACA 71

Query: 402 HSVFDNVSYKNITTWNELL-------------------------------SGYCFNCCDA 430
             VFD +  ++  +WN +L                               SGYC      
Sbjct: 72  RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 131

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F  +   GV  +  TF  ++++C   E   +  Q+H   +KTG        S+L+
Sbjct: 132 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALV 191

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y     LD++  F  G    +  SWGA ++  V        + +F  +   G    + 
Sbjct: 192 DMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQP 251

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              +   SCAA+      + +H   IK  F+++  V +A++D YAK   +  AR AF   
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAF-FG 310

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
             ++ V   N +++     GL  EAM +F  M  ++++    +   V SAC+      +G
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQG 370

Query: 671 ----CLLFKS----------------------MDS----QYGMQPSPDCYGCLVDMLSRN 700
               CL  KS                      M++    Q   Q     +  ++  L +N
Sbjct: 371 QQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQN 430

Query: 701 GYLEDA-KHVIEIMPF--QPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           G+ +D   H  E++ F  +P    Y S+L  C    + E G    +K++
Sbjct: 431 GHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVI 479


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 209/730 (28%), Positives = 366/730 (50%), Gaps = 9/730 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q   D F R +   L   +S+   L  R  G  +H   +K G   D  +    I+MY+  
Sbjct: 233 QMQQDGF-RPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAF 291

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G+    L +F +    NLVS   ++S  +Q+G ++    ++  M+  G +PN   V S++
Sbjct: 292 GHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSIL 351

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C +      G S+H   +K  + +   V  ++++ Y+KLGD+ +A  +F S++     
Sbjct: 352 PCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQL 411

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN++I GY         +  V  M  EG+  D  T I+ +  C    D  +G+ IH   
Sbjct: 412 LWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYA 471

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +RS +E + S++NAL+ MY     +    K+F  M  + +ISWNT+  GF+EN +     
Sbjct: 472 VRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACL 531

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
             F +  L+  + + VT   L+     + D+ +G  +  LA+  G   + +V ++LI M+
Sbjct: 532 RFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMY 591

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
             CG ++    +FD++S  N  ++N L++GY  N    ++L  F ++ ++  + N  T  
Sbjct: 592 TNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLL 651

Query: 453 YVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAE 510
            ++  C    + Q+ G+ +H   I+        + +S I  Y  F  L+     F    E
Sbjct: 652 NLLPIC----HSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGE 707

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           R ++  W A++SA V       A   F  +     K D   +  ++++C+ +G     + 
Sbjct: 708 RNNIV-WNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAEC 766

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +    ++ GF+  + V +A+ID +++CG I  AR  FD S    D + ++T+I AY+ HG
Sbjct: 767 VTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISME-KDSVSWSTMINAYSMHG 825

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
               A+++F  M    ++P   TFVSV+SACS  G +++G  LF+SM + +G+ P  + Y
Sbjct: 826 DGGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHY 885

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R G+L++A  ++  MPF+PS ++  SLL  CR HGN +LGE   + L     
Sbjct: 886 ACMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDH 945

Query: 751 KNDAAHVLLS 760
            N  ++V+LS
Sbjct: 946 GNPRSYVMLS 955



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 152/674 (22%), Positives = 318/674 (47%), Gaps = 8/674 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG +VH  +V+ G   ++ +Q  L+ MY+K G      RVFD M  R+L+SW  ++S   
Sbjct: 160 LGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYS 219

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG      +    M+ +GF PN  ++  ++ +   +G  + G  +H FALK  +  +  
Sbjct: 220 LNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDES 279

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  + ++ YA  G ++++  +F+    D++   N+MI      G   +A  V   M  +G
Sbjct: 280 VTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKG 339

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T ++ L  CS     + G  +HG++I+  +   +S+V+AL+ MY K   +D A 
Sbjct: 340 LVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAV 399

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  + +K  + WN+L  G+  N           +  + G  P+ +T   ++ +C    
Sbjct: 400 FLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTE 459

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL +G  +   A+       E+V ++L+ M+  CG + +   +F  +  + + +WN ++S
Sbjct: 460 DLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIIS 519

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+  N      L+ FC +  + ++ +  T   ++ +    E+  +   +H   I++G + 
Sbjct: 520 GFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNL 579

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y N G +    +  +    ++  S+ A+M+         E + +F+ ++
Sbjct: 580 DVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMI 639

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +  +KP+   + T+LN      +  + K++H + I+     E  + ++ I  Y++  +++
Sbjct: 640 KNDQKPN---IITLLNLLPICHSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLE 696

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                F      N+ IV+N ++ A         A + F +++  N++    T ++++SAC
Sbjct: 697 YCHNLFCLVGERNN-IVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISAC 755

Query: 662 SHKGLVDKG-CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           S  G  D   C+   ++  Q G   +      L+DM SR G +  A+ + +I   +    
Sbjct: 756 SQLGKADLAECV--TAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDI-SMEKDSV 812

Query: 721 VYRSLLSGCRIHGN 734
            + ++++   +HG+
Sbjct: 813 SWSTMINAYSMHGD 826



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/522 (24%), Positives = 237/522 (45%), Gaps = 1/522 (0%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
            F  + F    V++ C ++     G  +HC  ++     N  V  ++L+ YAK G V  +
Sbjct: 137 AFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLS 196

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RVF  + S D+  WNAMI GY+  G   EA   +  M  +G   +  + +  +   S +
Sbjct: 197 RRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGL 256

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              D G  +H   ++S V    S+  A I MY     +  +  +F +    +++S N++ 
Sbjct: 257 GVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMI 316

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
               ++    +   +F      G  PN VT   +L  C     ++ G  +  + +  G  
Sbjct: 317 SVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLA 376

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           ++ +V S+L+ M+ + G ++ A  +F +V+ K+   WN L+SGY  N     V+ +   +
Sbjct: 377 EQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRM 436

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              GV+ +  T   V+  C  +E+  +   IH   +++       + ++L+  Y + GQL
Sbjct: 437 QIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQL 496

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
               +  +  E   + SW  ++S     G +   +  F  +  A  + D   L  +++S 
Sbjct: 497 SICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSL 556

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +AI      +S+H   I+ G N +V VA+A+I  Y  CG I+     FD S +S + I Y
Sbjct: 557 SAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFD-SLSSVNTISY 615

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           N L+  Y  + L  E + +F  M   + +P+  T ++++  C
Sbjct: 616 NALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLLNLLPIC 657


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 201/734 (27%), Positives = 360/734 (49%), Gaps = 79/734 (10%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC------------------------- 92
           K+   G Q H  ++   F   +F+ N LI MY KC                         
Sbjct: 56  KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAML 115

Query: 93  -GYFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
            GY G G      ++FD M ER++VSW  ++S  + NG+    + +++ M   G + +  
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRT 175

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
               V+K C S+     G  IH  A+K+  + +   G ++L+ YAK   +  + + F+S+
Sbjct: 176 TFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +   W+A+I G          L +   M   G+ + + TF +  + C+ ++   +G 
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGS 295

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+HG  ++++    + I  A +DMY+K + +  A K+F  + + ++ S+N +  G++ + 
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
                          G   + V+ S   R C  +     GLQ+  L++         V +
Sbjct: 356 K--------------GLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 401

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +++ M+ +CGA+  A  VF+ +  ++  +WN +++ +  N  +   L  F          
Sbjct: 402 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF---------- 451

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
                                  IH  IIK+      ++  +LI  Y   G ++ + +  
Sbjct: 452 -----------------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLH 488

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +      + SW A++S    Q  + EA   F  ++E G  PD +   TIL++CA +   +
Sbjct: 489 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 548

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K IH  +IK    ++ Y++S ++D Y+KCG+++  ++ F+++ N  D + +N ++  Y
Sbjct: 549 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN-RDFVTWNAMVCGY 607

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A HGL  EA++IF+ M+L N++P+ ATF++V+ AC H GLV+KG   F SM S YG+ P 
Sbjct: 608 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 667

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            + Y C+VD++ R+G +  A  +IE MPF+    ++R+LLS C+IHGN E+ E A+  +L
Sbjct: 668 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSIL 727

Query: 747 LLLPKNDAAHVLLS 760
            L P++ AA+VLLS
Sbjct: 728 QLEPEDSAAYVLLS 741



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 290/631 (45%), Gaps = 56/631 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG  VK+GF  D+   + L+ MY+KC      ++ F  M E+N VSW+ I++  +Q
Sbjct: 193 GIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQ 252

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N +   GL+++ +M+  G   ++    SV + C  + A   G  +H  ALK     +  +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G + L+ Y K  +++ A+++F S+ + ++  +NA+I GYA                 +G+
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD--------------KGL 358

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D+ +   A + C+++     G Q+HGL ++S  + +I + NA++DMY K   +  A  
Sbjct: 359 GLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACL 418

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE M  +D +SWN +     +N N  +T SLF    +  SR                  
Sbjct: 419 VFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSR------------------ 460

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             LGL             +  V  +LI M+ +CG +E A  + D ++ + + +WN ++SG
Sbjct: 461 --LGL-------------DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 505

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +       +  KTF  + E GV+ +  T+  +++TC      ++  QIH  IIK    S 
Sbjct: 506 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 565

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            YI S+L+  Y   G + +       A   D  +W AM+      G   EA+ IF  +  
Sbjct: 566 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 625

Query: 543 AGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
              KP+      +L +C  +G  ++     H  +   G + ++   S V+D   + G + 
Sbjct: 626 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 685

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ---PSQATFVSVM 658
            A    +      D +++ TL+     HG V    E+ +K   + LQ      A +V + 
Sbjct: 686 KALELIEGMPFEADAVIWRTLLSICKIHGNV----EVAEKAAYSILQLEPEDSAAYVLLS 741

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +  ++ G+ ++   L K M    G++  P C
Sbjct: 742 NIYANAGMWNEVTKLRKMMRFN-GLKKEPGC 771



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 181/388 (46%), Gaps = 35/388 (9%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           SD  L  D + L+ +      +K  + G QVHG  +K    ++I + N ++ MY KCG  
Sbjct: 354 SDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGAL 413

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VF+EM  R+ VSW  I++A  QNG  +  L ++                      
Sbjct: 414 VEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF---------------------- 451

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                      IH   +K R+  + FVG ++++ Y+K G +  AE++   ++   V  WN
Sbjct: 452 -----------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWN 500

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           A+I G++      EA    S ML  G+  D +T+   L  C+ +   ++G+QIH  II+ 
Sbjct: 501 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 560

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           E++    I + L+DMY K   M     +FE+  ++D ++WN +  G++++    +   +F
Sbjct: 561 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 620

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
               L   +PNH TF  +LR CG +  ++ GL     +  + G   +    S ++ +  R
Sbjct: 621 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 680

Query: 395 CGAVEMAHSVFDNVSYK-NITTWNELLS 421
            G V  A  + + + ++ +   W  LLS
Sbjct: 681 SGQVSKALELIEGMPFEADAVIWRTLLS 708



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 32/335 (9%)

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           ++K+P +T  +        +     TFS + ++C     L  G Q     +   F     
Sbjct: 19  QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL----------------------- 420
           VT+ LI M+ +C  +E A  VFD +  ++  +WN +L                       
Sbjct: 79  VTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERD 138

Query: 421 --------SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
                   SGY  N     V+  F  +   G   +  TF  V+++C   E+     QIHG
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             +K GF       S+L+  Y    +LD S +F +     +  SW A+++  V       
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            + +F  + +AG    +    ++  SCA + A +    +H   +K  F T+V + +A +D
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLD 318

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            Y KC ++  A+  F+ S  ++++  YN +I+ YA
Sbjct: 319 MYMKCNNLSDAQKLFN-SLPNHNLQSYNAIIVGYA 352



 Score = 46.6 bits (109), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 1/114 (0%)

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           I   C+   A    K  H  +I   F   V+V + +I  Y KC D++ A   FD      
Sbjct: 48  IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD-GMPQR 106

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           D + +N ++  YA  G +  A ++FD M   ++    +     +    H+ ++D
Sbjct: 107 DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVID 160


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 203/633 (32%), Positives = 331/633 (52%), Gaps = 27/633 (4%)

Query: 139 NGFMPN--EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           +GF+ N  EF V + +K C   G    G  IH F++         V  S++N Y K G  
Sbjct: 58  SGFINNIDEFTVANALKAC--RGYPLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQF 115

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A  +F +++  D+  WN ++ G   C    +A +    M   G+  D  T+   L  C
Sbjct: 116 CKALCIFENLTHPDIVSWNTVLSG---CQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFC 172

Query: 257 --SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
              + A F IG Q+H  I++   +C + + NALI MY +   +  A +VFE M  +D++S
Sbjct: 173 WRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVS 232

Query: 315 WNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           WN +  G+S+    G  A S+F +    G   + ++F+  +  CG   +L+L  Q+  L+
Sbjct: 233 WNAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLS 292

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +         V++ LI  + +C  +E A  VF N++ +N+ +W  ++S       +A+ +
Sbjct: 293 IKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS-----IDEAEAV 347

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             F  +   GV  N  TF  ++      E       +HG   KTGFSS   +C+S+I  Y
Sbjct: 348 SFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMY 407

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS-LVEAGEKPDEYIL 552
             F  + +S +     +  D+ +W A++S  VH G   EA+  F S L+E+  KP++Y  
Sbjct: 408 AKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSGLIES--KPNQYSF 465

Query: 553 GTILNSCAAIGAYQRT-----KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           G+ILN   AIGA +       +  H  +IKLG NT+  V+SA++D YAK G I  ++  F
Sbjct: 466 GSILN---AIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVF 522

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            ++   +    + T+I AYA HG     M  F++M+   ++P   TF+S+++AC  +G+V
Sbjct: 523 VETPQQSQ-FAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMV 581

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D GC LF SM   Y ++PS + Y CLVDML R G LE+A+ ++  +P  P  +V +SLL 
Sbjct: 582 DMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLG 641

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            CR+HGN ++GE  ++ L+ + P    ++VL+S
Sbjct: 642 ACRVHGNVDMGERVADALMEMEPTESGSYVLMS 674



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 284/610 (46%), Gaps = 27/610 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG+Q+HG  +   F N   + N+L+ MY K G F   L +F+ +   ++VSW  ++S  
Sbjct: 81  LLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGC 140

Query: 121 IQNGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF--GYSIHCFALKIRI 176
            Q  E  F    K    M ++G + +     +V+  C     + F  G  +H   +K   
Sbjct: 141 -QTSEDAFSFACK----MNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGF 195

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVS 235
           +   FVG ++++ Y++ G +  A RVF  + + D+  WNAMI GY+  G YG EA+++  
Sbjct: 196 DCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFL 255

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M   G+ +D+ +F +A+  C    + ++ RQIHGL I++  E  +++ N LI  Y K  
Sbjct: 256 QMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQ 315

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A  VF+ M +++V+SW T+      + +  +  S F++  L G  PN VTF  L+ 
Sbjct: 316 VIEDARLVFQNMNERNVVSWTTMI-----SIDEAEAVSFFNEMRLDGVYPNDVTFVGLIH 370

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
                  +  G  +       GF  + NV +S+I M+ +  +++ +  VF  + Y++I  
Sbjct: 371 AITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIA 430

Query: 416 WNELLSGYCFN-CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM-VGQ-IHG 472
           WN L+SG+  N  C   +   F  + ES  + N  +F  ++     +E+  +  GQ  H 
Sbjct: 431 WNALISGFVHNGLCQEAIRAFFSGLIES--KPNQYSFGSILNAIGAAEDVSLKYGQRCHS 488

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            IIK G ++   + S+L+  Y   G +  S +      +    +W  ++SA    G    
Sbjct: 489 QIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYES 548

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASA 589
            +  F  +     +PD     +IL +C   G       +   ++K   +  + E Y  S 
Sbjct: 549 VMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHY--SC 606

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D   + G ++ A            + V  +L+ A   HG V     + D   L  ++P
Sbjct: 607 LVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVAD--ALMEMEP 664

Query: 650 SQATFVSVMS 659
           +++    +MS
Sbjct: 665 TESGSYVLMS 674



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 149/330 (45%), Gaps = 10/330 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I    ++S     K+  L  Q+HG  +K      + + N LI+ Y KC        VF
Sbjct: 265 DRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVF 324

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMGAS 161
             M ERN+VSWT ++S  I   E    +  + +M+ +G  PN+   VG +  + +     
Sbjct: 325 QNMNERNVVSWTTMIS--IDEAE---AVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVV 379

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  +H F  K        V  S++  YAK   +  + +VF  +   D+  WNA+I G+
Sbjct: 380 Q-GKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGF 438

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GRQIHGLIIRSEVEC 279
            H G   EA+    S L E    ++Y+F + L       D  +  G++ H  II+  +  
Sbjct: 439 VHNGLCQEAIRAFFSGLIES-KPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNT 497

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
              + +AL+DMY K   +  + KVF     +   +W T+   ++ + +     + F +  
Sbjct: 498 DPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMR 557

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
               RP+ +TF  +L  CG+   +D+G  L
Sbjct: 558 RLEVRPDSITFLSILTACGRRGMVDMGCHL 587


>gi|110739166|dbj|BAF01499.1| hypothetical protein [Arabidopsis thaliana]
          Length = 741

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 198/685 (28%), Positives = 339/685 (49%), Gaps = 43/685 (6%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +++ NN+I++Y K G      +VFD+M ERN VS+  I+    + G+ D    ++ +M+ 
Sbjct: 49  VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVA 197
            G++PN+  V  ++  C S+     G  +H  +LK  +   + FVG  +L  Y +L  + 
Sbjct: 109 FGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            AE+VF  +    +  WN M+    H G+  E +     ++  G ++ + +F+  L+G S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            V D DI +Q+H    +  ++C IS+VN+LI  Y K      A ++F+     D++SWN 
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +    ++++NP +   LF      G  PN  T+  +L     +  L  G Q+  + +  G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 + ++LI  + +CG +E +   FD +  KNI  WN LLSGY  N      L  F 
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-- 495
            + + G      TF   +++CC +E QQ+    H  I++ G+    Y+ SSL++SY    
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQ 461

Query: 496 ------------------------------FGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                                          GQ   S +  +  E+ D  SW   ++A  
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEV 584
              ++ E + +F  ++++  +PD+Y   +IL+ C+ +       SIH  + K  F+  + 
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V + +ID Y KCG I+     F+++   N +I +  LI     HG   EA+E F +   
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKN-LITWTALISCLGIHGYGQEALEKFKETLS 640

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
              +P + +F+S+++AC H G+V +G  LF+ M   YG++P  D Y C VD+L+RNGYL+
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPGMDHYRCAVDLLARNGYLK 699

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGC 729
           +A+H+I  MPF     V+R+ L GC
Sbjct: 700 EAEHLIREMPFPADAPVWRTFLDGC 724



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 146/595 (24%), Positives = 261/595 (43%), Gaps = 39/595 (6%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           GTQ+HG  +K G F  D F+   L+ +Y +        +VF++M  ++L +W  ++S   
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     +  + ++   G    E +   V+K    +   +    +HC A K  ++    
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y K G+   AER+F    S D+  WNA+I   A      +AL +  SM   G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + ++ T+++ L   SLV     GRQIHG++I++  E  I + NALID Y K   ++ + 
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + DK+++ WN L  G++ NK+     SLF + +  G RP   TFS  L+ C  + 
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VT 429

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIY------------------------------- 390
           +L    QL  + +  G+ D + V SSL+                                
Sbjct: 430 ELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486

Query: 391 -MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ R G    +  +   +   +  +WN  ++    +    +V++ F ++ +S +  +  
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
           TF  ++  C +  +  +   IHG I KT FS    ++C+ LI  Y   G + +  +    
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               ++ +W A++S L   G+  EA+  F   +  G KPD     +IL +C   G  +  
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             +   +   G    +      +D  A+ G +K A     +     D  V+ T +
Sbjct: 667 MGLFQKMKDYGVEPGMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 49/450 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +  Q+H    K G   +I + N+LI+ Y KCG      R+F +    ++VSW  I+ A  
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      LK++V M  +GF PN+    SV+ V   +     G  IH   +K   E    
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++FYAK G++  +   F  I   ++ CWNA++ GYA+   G   L++   ML  G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG 411

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
               +YTF  AL+ C +       +Q+H +I+R   E +  ++++L+  Y K+  M+ A 
Sbjct: 412 FRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467

Query: 302 --------------------------------KVFERMADKDVISWNTLFGGFSENKNPG 329
                                           K+   +   D +SWN      S +    
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSL 388
           +   LF   + S  RP+  TF  +L  C KL DL LG  +  L     F   +  V + L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +CG++     VF+    KN+ TW  L+S    +    + L+ F      G + + 
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
            +F  ++ T CR          HG ++K G
Sbjct: 648 VSFISIL-TACR----------HGGMVKEG 666



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 205/416 (49%), Gaps = 9/416 (2%)

Query: 250 INALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           ++ L  C     F   + +H L I   S +   + + N +I +Y K   +  A KVF++M
Sbjct: 16  VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            +++ +S+NT+  G+S+  +  +   +F +    G  PN  T S LL  C  L D+  G 
Sbjct: 76  PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGT 133

Query: 368 QLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           QL  L+L  G F+ +  V + L+ ++ R   +EMA  VF+++ +K++ TWN ++S     
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + +  F  +   G  +   +F  V++     ++  +  Q+H +  K G      + 
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SLI +Y   G    +      A   D+ SW A++ A     +  +A+ +F S+ E G  
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P++    ++L   + +      + IH  +IK G  T + + +A+ID YAKCG+++ +R+ 
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373

Query: 607 FDQSFNSNDVIVYNTLIMAYAHH-GLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           FD   + N ++ +N L+  YA+  G +   + +F +M     +P++ TF + + +C
Sbjct: 374 FDYIRDKN-IVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSC 426



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFG 96
           S +R D       LSL   L    LG+ +HG I K  F+  D F+ N LI MY KCG   
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             ++VF+E  E+NL++WT ++S    +G     L+ + +  + GF P+  +  S++  C 
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658

Query: 157 SMGASEFGYSI 167
             G  + G  +
Sbjct: 659 HGGMVKEGMGL 669


>gi|30694836|ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g58590
 gi|332646281|gb|AEE79802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 198/685 (28%), Positives = 339/685 (49%), Gaps = 43/685 (6%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +++ NN+I++Y K G      +VFD+M ERN VS+  I+    + G+ D    ++ +M+ 
Sbjct: 49  VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVA 197
            G++PN+  V  ++  C S+     G  +H  +LK  +   + FVG  +L  Y +L  + 
Sbjct: 109 FGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            AE+VF  +    +  WN M+    H G+  E +     ++  G ++ + +F+  L+G S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            V D DI +Q+H    +  ++C IS+VN+LI  Y K      A ++F+     D++SWN 
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +    ++++NP +   LF      G  PN  T+  +L     +  L  G Q+  + +  G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 + ++LI  + +CG +E +   FD +  KNI  WN LLSGY  N      L  F 
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-- 495
            + + G      TF   +++CC +E QQ+    H  I++ G+    Y+ SSL++SY    
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQ 461

Query: 496 ------------------------------FGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                                          GQ   S +  +  E+ D  SW   ++A  
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEV 584
              ++ E + +F  ++++  +PD+Y   +IL+ C+ +       SIH  + K  F+  + 
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V + +ID Y KCG I+     F+++   N +I +  LI     HG   EA+E F +   
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKN-LITWTALISCLGIHGYGQEALEKFKETLS 640

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
              +P + +F+S+++AC H G+V +G  LF+ M   YG++P  D Y C VD+L+RNGYL+
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLK 699

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGC 729
           +A+H+I  MPF     V+R+ L GC
Sbjct: 700 EAEHLIREMPFPADAPVWRTFLDGC 724



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/595 (24%), Positives = 262/595 (44%), Gaps = 39/595 (6%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           GTQ+HG  +K G F  D F+   L+ +Y +        +VF++M  ++L +W  ++S   
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     +  + ++   G    E +   V+K    +   +    +HC A K  ++    
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y K G+   AER+F    S D+  WNA+I   A      +AL +  SM   G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + ++ T+++ L   SLV     GRQIHG++I++  E  I + NALID Y K   ++ + 
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + DK+++ WN L  G++ NK+     SLF + +  G RP   TFS  L+ C  + 
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VT 429

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIY------------------------------- 390
           +L    QL  + +  G+ D + V SSL+                                
Sbjct: 430 ELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486

Query: 391 -MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ R G    +  +   +   +  +WN  ++    +    +V++ F ++ +S +  +  
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
           TF  ++  C +  +  +   IHG I KT FS    ++C+ LI  Y   G + +  +    
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               ++ +W A++S L   G+  EA+  F   +  G KPD     +IL +C   G  +  
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             +   +   G   E+      +D  A+ G +K A     +     D  V+ T +
Sbjct: 667 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 49/450 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +  Q+H    K G   +I + N+LI+ Y KCG      R+F +    ++VSW  I+ A  
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      LK++V M  +GF PN+    SV+ V   +     G  IH   +K   E    
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++FYAK G++  +   F  I   ++ CWNA++ GYA+   G   L++   ML  G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG 411

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
               +YTF  AL+ C +       +Q+H +I+R   E +  ++++L+  Y K+  M+ A 
Sbjct: 412 FRPTEYTFSTALKSCCVTE----LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467

Query: 302 --------------------------------KVFERMADKDVISWNTLFGGFSENKNPG 329
                                           K+   +   D +SWN      S +    
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSL 388
           +   LF   + S  RP+  TF  +L  C KL DL LG  +  L     F   +  V + L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +CG++     VF+    KN+ TW  L+S    +    + L+ F      G + + 
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
            +F  ++ T CR          HG ++K G
Sbjct: 648 VSFISIL-TACR----------HGGMVKEG 666



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 205/416 (49%), Gaps = 9/416 (2%)

Query: 250 INALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           ++ L  C     F   + +H L I   S +   + + N +I +Y K   +  A KVF++M
Sbjct: 16  VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            +++ +S+NT+  G+S+  +  +   +F +    G  PN  T S LL  C  L D+  G 
Sbjct: 76  PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGT 133

Query: 368 QLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           QL  L+L  G F+ +  V + L+ ++ R   +EMA  VF+++ +K++ TWN ++S     
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + +  F  +   G  +   +F  V++     ++  +  Q+H +  K G      + 
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SLI +Y   G    +      A   D+ SW A++ A     +  +A+ +F S+ E G  
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P++    ++L   + +      + IH  +IK G  T + + +A+ID YAKCG+++ +R+ 
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373

Query: 607 FDQSFNSNDVIVYNTLIMAYAHH-GLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           FD   + N ++ +N L+  YA+  G +   + +F +M     +P++ TF + + +C
Sbjct: 374 FDYIRDKN-IVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSC 426



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFG 96
           S +R D       LSL   L    LG+ +HG I K  F+  D F+ N LI MY KCG   
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             ++VF+E  E+NL++WT ++S    +G     L+ + +  + GF P+  +  S++  C 
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658

Query: 157 SMGASEFGYSI 167
             G  + G  +
Sbjct: 659 HGGMVKEGMGL 669


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/716 (27%), Positives = 354/716 (49%), Gaps = 13/716 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L S   G  +HG + KLG      + N LIA+YS+CG      RVFD M  R+ +SW  
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++     NG     + ++  M + G   +   V SV+  C  +G    G ++H +++K  
Sbjct: 276 MIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSG 335

Query: 176 IE----------KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHC 224
           +            +  +G  ++  Y K GD+A+A RVF ++SS  +V  WN ++GGYA  
Sbjct: 336 LLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKV 395

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   E+L++   M   GI  D++     L+  + ++    G   HG I++       ++ 
Sbjct: 396 GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVC 455

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NALI  Y KS+ +  A  VF RM  +D ISWN++  G S N    +   LF +    G  
Sbjct: 456 NALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQE 515

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + VT   +L  C +      G  +   ++  G + E ++ ++L+ M+  C   +  + +
Sbjct: 516 LDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQI 575

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++  KN+ +W  +++ Y        V      +   G+  +       +      E+ 
Sbjct: 576 FRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESL 635

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +    +HG  I+ G      + ++L++ YV    ++ +    +     D+ SW  ++   
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                 +E+ ++F  ++    +P+   +  IL + A+I + +R + IH + ++ GF  + 
Sbjct: 696 SRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDS 754

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           Y ++A++D Y KCG +  AR+ FD+     ++I +  +I  Y  HG    A+ +F++M+ 
Sbjct: 755 YASNALVDMYVKCGALLVARVLFDR-LTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRG 813

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           + ++P  A+F +++ AC H GL  +G   FK+M  +Y ++P    Y C+VD+LSR G L+
Sbjct: 814 SGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLK 873

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A   IE MP +P  +++ SLL GCRIH N +L E  ++K+  L P+N   +VLL+
Sbjct: 874 EALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLA 929



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 158/603 (26%), Positives = 295/603 (48%), Gaps = 15/603 (2%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAER--NLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           L   L+  Y KCG  G    VFD M  +  ++  WT ++SA  + G+F   + ++  M+ 
Sbjct: 138 LGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQC 197

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  P+  AV  V+K   S+G+   G  IH    K+ + +   V  +++  Y++ G +  
Sbjct: 198 CGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMED 257

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RVF S+   D   WN+MIGG    G+   A+++ S M  +G  +   T ++ L  C+ 
Sbjct: 258 AARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAG 317

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALID----------MYIKSSGMDYAFKVFERMA 308
           +    IG+ +HG  ++S +   +  V + ID          MY+K   M  A +VF+ M+
Sbjct: 318 LGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMS 377

Query: 309 DK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            K +V  WN + GG+++     ++ SLF +    G  P+    S LL+    L     GL
Sbjct: 378 SKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGL 437

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
                 +  GF  +  V ++LI  + +   +  A  VF+ +  ++  +WN ++SG   N 
Sbjct: 438 VAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNG 497

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
            +++ ++ F  +W  G E++  T   V+  C +S        +HG  +KTG      + +
Sbjct: 498 LNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLAN 557

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  Y N     ++ +      + ++ SW AM+++ +  G   +   +   +V  G +P
Sbjct: 558 ALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRP 617

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D + + + L++ A   + ++ KS+H + I+ G    + VA+A+++ Y KC +++ AR+ F
Sbjct: 618 DVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIF 677

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D+  N  DVI +NTLI  Y+ +   +E+  +F  M L   +P+  T   ++ A +    +
Sbjct: 678 DRVTN-KDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILPAAASISSL 735

Query: 668 DKG 670
           ++G
Sbjct: 736 ERG 738



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 127/290 (43%), Gaps = 3/290 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +  +L      +S   G  VHG+ ++ G    + + N L+ MY KC       
Sbjct: 615 IRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEAR 674

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++++SW  ++    +N   +    ++ DM    F PN   +  ++    S+ 
Sbjct: 675 LIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASIS 733

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + E G  IH +AL+    ++ +   ++++ Y K G +  A  +F  ++  ++  W  MI 
Sbjct: 734 SLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIA 793

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
           GY   G+G  A+ +   M   GI  D  +F   L  C        GR+    + +  ++E
Sbjct: 794 GYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIE 853

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
             +     ++D+  ++  +  A +  E M  + D   W +L  G   +KN
Sbjct: 854 PKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKN 903



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 11/201 (5%)

Query: 31  NNQFCSDSF---------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFL 81
            N F ++SF          R + + +   L  + ++ S   G ++H + ++ GF  D + 
Sbjct: 697 RNNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYA 756

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF 141
            N L+ MY KCG       +FD + ++NL+SWT++++    +G     + ++  M+ +G 
Sbjct: 757 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGI 816

Query: 142 MPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
            P+  +  +++  C   G A+E          + +IE        +++  ++ GD+  A 
Sbjct: 817 EPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEAL 876

Query: 201 RVFYSIS-SDDVGCWNAMIGG 220
               S+    D   W +++ G
Sbjct: 877 EFIESMPIEPDSSIWVSLLHG 897


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 199/652 (30%), Positives = 337/652 (51%), Gaps = 13/652 (1%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C ++ + ++G  IH   LK   + +  +   +LN Y K G +  A + F ++    V  W
Sbjct: 90  CTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSW 149

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
             MI GY+  G   +A+ +   ML  G   D+ TF + ++ C +  D D+G Q+HG +I+
Sbjct: 150 TIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIK 209

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S  +  +   NALI MY K   + +A  VF  ++ KD+ISW ++  GF++     +   L
Sbjct: 210 SGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYL 269

Query: 335 FHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           F      G  +PN   F  +   C  LL  + G Q+Q +    G         SL  M+ 
Sbjct: 270 FRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYA 329

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + G +  A   F  +   ++ +WN +++    N    + +  FC +   G+  +  TF  
Sbjct: 330 KFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLN 388

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERL 512
           ++  C          QIH  IIK G      +C+SL+  Y     L ++F  F + +E  
Sbjct: 389 LLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENG 448

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           ++ SW A++SA        EA  +F  ++ +  KPD   + TIL +CA + + +    +H
Sbjct: 449 NLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVH 508

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            F +K G   +V V++ +ID YAKCG +K AR  FD + N  D++ +++LI+ YA  GL 
Sbjct: 509 CFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNP-DIVSWSSLIVGYAQFGLG 567

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
            EA+ +F  M+   +QP++ T++ V+SACSH GLV++G  L+ +M+ + G+ P+ +   C
Sbjct: 568 QEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSC 627

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +VD+L+R G L +A++ I+   F P  T++++LL+ C+ HGN ++ E A+E +L L P N
Sbjct: 628 MVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSN 687

Query: 753 DAAHVLLSK--------RKRQREGNLLDHEGVCNVNDGIKTVDLKLELKLEF 796
            AA VLLS         ++  R  NL+   GV  V  G   +++K ++ + F
Sbjct: 688 SAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKV-PGQSWIEVKDQIHVFF 738



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 163/654 (24%), Positives = 309/654 (47%), Gaps = 6/654 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++ +P      +    N++S   G ++H HI+K     D+ LQN+++ MY KCG   
Sbjct: 73  NSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLK 132

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              + FD M  R++VSWT+++S   QNG+ +  + MY+ M  +G+ P++   GS++K C 
Sbjct: 133 DARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACC 192

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G  + G  +H   +K   + +     ++++ Y K G +A A  VF  IS+ D+  W +
Sbjct: 193 IAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWAS 252

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           MI G+   GY  EAL +   M  +G+   +++ F +    C  +   + GRQI G+  + 
Sbjct: 253 MITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKF 312

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +  ++    +L DMY K   +  A + F ++   D++SWN +    + N +  +    F
Sbjct: 313 GLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALA-NSDVNEAIYFF 371

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            + I  G  P+ +TF  LL  CG  + L+ G+Q+    +  G      V +SL+ M+ +C
Sbjct: 372 CQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKC 431

Query: 396 GAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
             +  A +VF ++S   N+ +WN +LS    +    +  + F  +  S  + +  T   +
Sbjct: 432 SNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTI 491

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           + TC    + ++  Q+H   +K+G      + + LI  Y   G L ++    +  +  D+
Sbjct: 492 LGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDI 551

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH-P 573
            SW +++      G   EA+ +F  +   G +P+E     +L++C+ IG  +    ++  
Sbjct: 552 VSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNT 611

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
             I+LG        S ++D  A+ G +  A     ++    D+ ++ TL+ +   HG V 
Sbjct: 612 MEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVD 671

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            A    +   +  L PS +  + ++S         K     +++  Q G+Q  P
Sbjct: 672 IAERAAE--NILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVP 723


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 214/718 (29%), Positives = 363/718 (50%), Gaps = 24/718 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG Q+H  I KL   +D+ L N L++MYS C G      RVFDE+  RN V+W  I+S  
Sbjct: 261 LGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVY 320

Query: 121 IQNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            + G+     K++  M+  G      PNE+ + S++    S+        +    +  RI
Sbjct: 321 CRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL---VLLEQMLTRI 377

Query: 177 EKNPF-----VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           EK+ F     VG +++N +A+ G +  A+ +F  +   +    N ++ G A    G EA 
Sbjct: 378 EKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAA 437

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR----QIHGLIIRSE-VECSISIVNA 286
            V   M  + + ++  + +  L   +  ++   G+    ++H  + RS  V+  ISI NA
Sbjct: 438 KVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNA 496

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L++MY K + +D A  VF+ M  KD +SWN++  G   N+   +  S FH    +G  P+
Sbjct: 497 LVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPS 556

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           + +    L  C  L  L LG Q+       G   + +V+++L+ ++    ++     VF 
Sbjct: 557 NFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFF 616

Query: 407 NVSYKNITTWNELLSGYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            +   +  +WN  +     +       LK F  + ++G   N  TF  ++          
Sbjct: 617 QMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLG 676

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSAL 524
           +  QIH  I+K   +    I ++L+  Y    Q+++    FS  +ER D  SW +M+S  
Sbjct: 677 LGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGY 736

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           +H G  H+A+ +   +++ G+K D +   T+L++CA++   +R   +H   ++    ++V
Sbjct: 737 LHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDV 796

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V SA++D YAKCG I  A   F+      ++  +N++I  YA HG   +A++IF +MK 
Sbjct: 797 VVGSALVDMYAKCGKIDYASRFFEL-MPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQ 855

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
               P   TFV V+SACSH GLVD+G   FKSM   YG+ P  + + C+VD+L R G ++
Sbjct: 856 HGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVK 915

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLLS 760
             +  I+ MP  P+  ++R++L   CR +G N ELG+ A++ L+ L P+N   +VLLS
Sbjct: 916 KIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLS 973



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 162/694 (23%), Positives = 324/694 (46%), Gaps = 28/694 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
              +H  + K GFT+D+F  N LI +Y + G      ++FDEM ++NLVSW+ ++S   Q
Sbjct: 159 ANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNP 180
           N   D    ++  + ++G +PN FAVGS ++ C   G++  + G  IH F  K+    + 
Sbjct: 219 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDM 278

Query: 181 FVGCSVLNFYAKL-GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            +   +++ Y+   G +  A RVF  I   +   WN++I  Y   G    A  + S M  
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338

Query: 240 EGITM----DKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           EG+ +    ++YT  + +     +AD    +  Q+   I +S     + + +AL++ + +
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              MD A  +F++M D++ ++ N L  G +  ++ G+ A+   K +      N  +  +L
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLAR-QHQGEEAAKVFKEMKDLVEINSESLVVL 457

Query: 354 LRQCGKLLDLD----LGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNV 408
           L    +  +L      G ++       G +D   ++ ++L+ M+ +C A++ A SVF  +
Sbjct: 458 LSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLM 517

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             K+  +WN ++SG   N    + +  F  +  +G+  +  +    + +C       +  
Sbjct: 518 PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV-HQ 527
           QIHG   K G      + ++L+  Y     ++   +        D  SW + + AL  ++
Sbjct: 578 QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYE 637

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               +A+  F  +++AG +P+      IL + ++         IH  ++K     +  + 
Sbjct: 638 ASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIE 697

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A++  Y KC  ++   + F +     D + +N++I  Y H G++ +AM++   M     
Sbjct: 698 NALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ 757

Query: 648 QPSQATFVSVMSACSHKGLVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +    TF +V+SAC+    +++G     C +   ++S   +  +      LVDM ++ G 
Sbjct: 758 KLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA------LVDMYAKCGK 811

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           ++ A    E+MP + +   + S++SG   HG+ +
Sbjct: 812 IDYASRFFELMPVR-NIYSWNSMISGYARHGHGQ 844



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/616 (23%), Positives = 281/616 (45%), Gaps = 27/616 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           VL  Q+   I K GF  D+++ + L+  +++ G       +F +M +RN V+   ++   
Sbjct: 368 VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 427

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---------GYSIHCFA 171
            +  + +   K++ +MK      +   + S   V +    +EF         G  +H + 
Sbjct: 428 ARQHQGEEAAKVFKEMK------DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYL 481

Query: 172 LKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +   ++    +G +++N Y K   +  A  VF  + S D   WN+MI G  H     EA
Sbjct: 482 FRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEA 541

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           ++   +M   G+    ++ I+ L  CS +    +GRQIHG   +  ++  +S+ NAL+ +
Sbjct: 542 VSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTL 601

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE-NKNPGQTASLFHKFILSGSRPNHVT 349
           Y ++  ++   KVF +M + D +SWN+  G  ++   +  Q    F + + +G RPN VT
Sbjct: 602 YAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVT 661

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           F  +L        L LG Q+  L L     D+  + ++L+  + +C  +E    +F  +S
Sbjct: 662 FINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMS 721

Query: 410 -YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  +      +     + + G +++G TF  V+  C      +   
Sbjct: 722 ERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGM 781

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++H   ++    S   + S+L+  Y   G++D +  F       ++ SW +M+S     G
Sbjct: 782 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHG 841

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----AYQRTKSIHPFVIKLGFNTEV 584
           H  +A+ IF  + + G+ PD      +L++C+ +G     Y+  KS+       G +  +
Sbjct: 842 HGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEV---YGLSPRI 898

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH-HGLVSEAMEIFDKMK 643
              S ++D   + GD+K             +++++ T++ A    +G  +E  +   KM 
Sbjct: 899 EHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKM- 957

Query: 644 LANLQPSQATFVSVMS 659
           L  L+P  A    ++S
Sbjct: 958 LIELEPQNAVNYVLLS 973



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 183/387 (47%), Gaps = 10/387 (2%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           +LS   +L    LG Q+HG   K G   D+ + N L+ +Y++        +VF +M E +
Sbjct: 563 TLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYD 622

Query: 110 LVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            VSW   + A A         LK +++M   G+ PN     +++    S      G+ IH
Sbjct: 623 QVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIH 682

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAHCGY 226
              LK  +  +  +  ++L FY K   +   E +F  +S   D+V  WN+MI GY H G 
Sbjct: 683 ALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVS-WNSMISGYLHSGI 741

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A+++V  M+  G  +D +TF   L  C+ VA  + G ++H   +R+ +E  + + +A
Sbjct: 742 LHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA 801

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY K   +DYA + FE M  +++ SWN++  G++ + +  +   +F +    G  P+
Sbjct: 802 LVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPD 861

Query: 347 HVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           HVTF  +L  C  +  +D G +  + +    G        S ++ +  R G V+      
Sbjct: 862 HVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFI 921

Query: 406 DNVSY-KNITTWNELLSGYCFNCCDAD 431
             +    NI  W  +L      CC A+
Sbjct: 922 KTMPMDPNILIWRTVLGA----CCRAN 944



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A  LS   ++ +   G +VH   V+    +D+ + + L+ MY+KCG   +  R F
Sbjct: 760 DGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFF 819

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M  RN+ SW  ++S   ++G     LK++  MK +G  P+      V+  C  +G  +
Sbjct: 820 ELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVD 879

Query: 163 FGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNA 216
            GY         + L  RIE      C V +   + GDV   E    ++  D ++  W  
Sbjct: 880 EGYKHFKSMGEVYGLSPRIEH---FSCMV-DLLGRAGDVKKIEDFIKTMPMDPNILIWRT 935

Query: 217 MIGG 220
           ++G 
Sbjct: 936 VLGA 939


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/762 (27%), Positives = 372/762 (48%), Gaps = 14/762 (1%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           N    S  FLR     L K+LS ++N         VH  I+  G +  +     LI+ Y+
Sbjct: 12  NTPEPSQEFLRSS---LLKTLSSAKNTPQL---RTVHSLIITSGLSLSVIFSGKLISKYA 65

Query: 91  KCGYFGWGLRVFDEMAERNLVS-WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           +       + VF  ++  N V  W  I+ A   NG F   L  Y +M+     P+ F   
Sbjct: 66  QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+  C  +   E G  +H  A+++  E + ++G ++++ Y++  D+  A  VF  +S+ 
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D   WN++I GY   G+  +AL++       G+  D +T  + L  C  +     G  +H
Sbjct: 186 DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH 245

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G+I +  +   + I N L+ MY K   +  A +VF +MA KD ++WNT+  G+++     
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
            +  LF   I  G  P+ ++ +  +R CG+  DL +G  +    +  GF  +    + LI
Sbjct: 306 ASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A  VFD    K+  TWN L++GY  +    + L++F  + +   + +  
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSV 423

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++    +  +      IH  +IK GF +   I +SL+  Y   G++D+  +  +  
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  ++++ VH         + + +   G  PDE  +  IL  C+ +   ++ K
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH ++ K GF + V + +A+I+ Y+KCG ++     F +     DV+ +  LI A+  +
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF-KYMKEKDVVTWTALISAFGMY 602

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   +A++ F  M+L+ + P    F++ + ACSH G+V +G   F  M + Y ++P  + 
Sbjct: 603 GEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEH 662

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L+R+G L  A+  I  MP +P  +++ +LLS CR  GN  + +  S+K+L L 
Sbjct: 663 YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELN 722

Query: 750 PKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLE 791
             +   +VL+S         L   + V  V + +KT  LK E
Sbjct: 723 SDDTGYYVLVS----NIYATLGKWDQVKTVRNSMKTKGLKKE 760


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/656 (30%), Positives = 340/656 (51%), Gaps = 6/656 (0%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            L +W L +  +  NG++   +  Y ++K  G    + +V   +    S  +   G S+H
Sbjct: 11  KLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLH 70

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYG 227
              +K   +    +G S++ FY + GD   A  VF S+  S D   WN +I G+   G  
Sbjct: 71  ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
              L   ++    G   +  T +  +Q C ++     G  +HG +I+S      S+ N+L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPN 346
           + MY+ +  M+ A ++F+ M +KDVI+W+ + GG+ + + P     +F K +L  G  P+
Sbjct: 191 LSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            V    +L+ C    D+  G  +  L +H GF  +  V +SLI M+ +C     A  VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +S +N  +WN +LSG+  N   ++      ++ +  VE +  T   +++ C    +   
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IH  +I+ G  +   + S+LI +Y     ++ ++E      R D+ SW  M+S   H
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G   EA+ ++  +     KP+   +  +L +C+     +R+K  H   I+ GF +EV V
Sbjct: 430 CGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTV 489

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +AV+D Y+KCG+I  +R AFDQ     +++ ++ +I AY  +GL  EA+ +F +MK   
Sbjct: 490 GTAVVDMYSKCGEILASRRAFDQ-LALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG 548

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           L+P+  T +SV++ACSH GLV++G  LFKSM  + G++P  + Y C+VDML R G L+ A
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608

Query: 707 KHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             VI+ MP   +   +++ SLLS CR +G  ELG+ A  ++L L P N A +++ S
Sbjct: 609 IEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVAS 664



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 278/612 (45%), Gaps = 9/612 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RNLVSWTLIVSAAI 121
           G  +H  ++K GF +   + N+++  Y +CG F   + VF+ M   R+ VSW +++   +
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG    GL  + + +  GF PN   +  V++ C  +G    G  +H + +K        
Sbjct: 126 DNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISS 185

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFE 240
           V  S+L+ Y    D+  A  +F  +   DV  W+ MIGGY         L +   M L  
Sbjct: 186 VQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVP 244

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D    ++ L+ C+   D   GR +HGL+I    +C + + N+LIDMY K      A
Sbjct: 245 GIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA 304

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           FKVF  ++ ++ +SWN++  GF  N+N  +  SL           + VT   +L+ C   
Sbjct: 305 FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYF 364

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           +       + C+ +  G    E V S+LI  + +C  +E+A  VF  +  +++ +W+ ++
Sbjct: 365 VHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMI 424

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+       + +  +  +    V+ N  T   ++E C  +   +     HG  I+ GF+
Sbjct: 425 SGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFA 484

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + ++++  Y   G++  S    +     ++ +W AM++A    G  HEA+ +F  +
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGD 599
              G KP+     ++L +C+  G  +   S+    V +LG        S ++D   + G 
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604

Query: 600 IKGARMAFDQSFNS--NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVS 656
           +  A        ++  N   ++ +L+ A   +GL     E     ++  L+PS  A ++ 
Sbjct: 605 LDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAIS--RVLELEPSNSAGYLV 662

Query: 657 VMSACSHKGLVD 668
             S  +  GL D
Sbjct: 663 ASSMYAADGLWD 674



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 251/525 (47%), Gaps = 38/525 (7%)

Query: 60  RVLGTQ-----VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           R+LGT+     +HG+++K GF     +QN+L++MY           +FDEM E+++++W+
Sbjct: 160 RILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWS 218

Query: 115 LIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +++   +Q  E  +GL+M+  M    G  P+   + SV+K C S      G  +H   + 
Sbjct: 219 VMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH 278

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
              + + FV  S+++ Y+K  D  +A +VF  IS  +   WN+M+ G+       EA ++
Sbjct: 279 RGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSL 338

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           +SSM  E +  D+ T +N LQ C         + IH ++IR   E +  +++ALID Y K
Sbjct: 339 ISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAK 398

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A++VF RM  +DV+SW+T+  GF+    P +  +++ +      +PN +T   L
Sbjct: 399 CYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINL 458

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C    +L        +A+  GF  E  V ++++ M+ +CG +  +   FD ++ KNI
Sbjct: 459 LEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNI 518

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW+ +++ Y  N    + L  F  +   G++ N  T   V+  C            HG 
Sbjct: 519 VTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS-----------HGG 567

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +++ G         SL KS V    L+  FE            +  M+  L   G    A
Sbjct: 568 LVEEGL--------SLFKSMVQELGLEPGFEH-----------YSCMVDMLGRAGKLDTA 608

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           + +  ++     K    I G++L++C + G  +  K     V++L
Sbjct: 609 IEVIKAMPH-NLKNGASIWGSLLSACRSYGLTELGKEAISRVLEL 652



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 12/391 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D + +   L    + +    G  VHG ++  GF  D+F++N+LI MYSKC   G   
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+E+++RN VSW  ++S  + N  +     +   M+      +E  + +++++C    
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                 SIHC  ++   E N  V  ++++ YAK   +  A  VF  +   DV  W+ MI 
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+AHCG   EA+ V   M  + +  +  T IN L+ CS+ A+    +  HG+ IR     
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +++  A++DMY K   +  + + F+++A K++++W+ +   +  N    +  +LF +  
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMK 545

Query: 340 LSGSRPNHVTFSILLRQC--GKLLDLDLGL---QLQCLALHCGFLDEENVTSSLIYMFCR 394
             G +PN VT   +L  C  G L++  L L    +Q L L  GF       S ++ M  R
Sbjct: 546 RHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGF----EHYSCMVDMLGR 601

Query: 395 CGAVEMAHSVFDNVSY--KN-ITTWNELLSG 422
            G ++ A  V   + +  KN  + W  LLS 
Sbjct: 602 AGKLDTAIEVIKAMPHNLKNGASIWGSLLSA 632


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/656 (30%), Positives = 340/656 (51%), Gaps = 6/656 (0%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            L +W L +  +  NG++   +  Y ++K  G    + +V   +    S  +   G S+H
Sbjct: 11  KLPNWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLH 70

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYG 227
              +K   +    +G S++ FY + GD   A  VF S+  S D   WN +I G+   G  
Sbjct: 71  ACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGAL 130

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
              L   ++    G   +  T +  +Q C ++     G  +HG +I+S      S+ N+L
Sbjct: 131 VAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSL 190

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPN 346
           + MY+ +  M+ A ++F+ M +KDVI+W+ + GG+ + + P     +F K +L  G  P+
Sbjct: 191 LSMYVDAD-MECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            V    +L+ C    D+  G  +  L +H GF  +  V +SLI M+ +C     A  VF+
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFN 309

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +S +N  +WN +LSG+  N   ++      ++ +  VE +  T   +++ C    +   
Sbjct: 310 EISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFH 369

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IH  +I+ G  +   + S+LI +Y     ++ ++E      R D+ SW  M+S   H
Sbjct: 370 CKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAH 429

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G   EA+ ++  +     KP+   +  +L +C+     +R+K  H   I+ GF +EV V
Sbjct: 430 CGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTV 489

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +AV+D Y+KCG+I  +R AFDQ     +++ ++ +I AY  +GL  EA+ +F +MK   
Sbjct: 490 GTAVVDMYSKCGEILASRRAFDQ-LALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG 548

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           L+P+  T +SV++ACSH GLV++G  LFKSM  + G++P  + Y C+VDML R G L+ A
Sbjct: 549 LKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTA 608

Query: 707 KHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             VI+ MP   +   +++ SLLS CR +G  ELG+ A  ++L L P N A +++ S
Sbjct: 609 IEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVAS 664



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 153/612 (25%), Positives = 278/612 (45%), Gaps = 9/612 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RNLVSWTLIVSAAI 121
           G  +H  ++K GF +   + N+++  Y +CG F   + VF+ M   R+ VSW +++   +
Sbjct: 66  GKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHL 125

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG    GL  + + +  GF PN   +  V++ C  +G    G  +H + +K        
Sbjct: 126 DNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISS 185

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFE 240
           V  S+L+ Y    D+  A  +F  +   DV  W+ MIGGY         L +   M L  
Sbjct: 186 VQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVP 244

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D    ++ L+ C+   D   GR +HGL+I    +C + + N+LIDMY K      A
Sbjct: 245 GIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA 304

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           FKVF  ++ ++ +SWN++  GF  N+N  +  SL           + VT   +L+ C   
Sbjct: 305 FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYF 364

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           +       + C+ +  G    E V S+LI  + +C  +E+A  VF  +  +++ +W+ ++
Sbjct: 365 VHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMI 424

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+       + +  +  +    V+ N  T   ++E C  +   +     HG  I+ GF+
Sbjct: 425 SGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFA 484

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + ++++  Y   G++  S    +     ++ +W AM++A    G  HEA+ +F  +
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGD 599
              G KP+     ++L +C+  G  +   S+    V +LG        S ++D   + G 
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604

Query: 600 IKGARMAFDQSFNS--NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVS 656
           +  A        ++  N   ++ +L+ A   +GL     E     ++  L+PS  A ++ 
Sbjct: 605 LDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAIS--RVLELEPSNSAGYLV 662

Query: 657 VMSACSHKGLVD 668
             S  +  GL D
Sbjct: 663 ASSMYAADGLWD 674



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 252/525 (48%), Gaps = 38/525 (7%)

Query: 60  RVLGTQ-----VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           R+LGT+     +HG+++K GF     +QN+L++MY           +FDEM E+++++W+
Sbjct: 160 RILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDAD-MECARELFDEMHEKDVIAWS 218

Query: 115 LIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +++   +Q  E  +GL+M+  M    G  P+   + SV+K C S      G  +H   + 
Sbjct: 219 VMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIH 278

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
              + + FV  S+++ Y+K  D  +A +VF  IS  +   WN+M+ G+       EA ++
Sbjct: 279 RGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSL 338

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           +SSM  E +  D+ T +N LQ C         + IH ++IR   E +  +++ALID Y K
Sbjct: 339 ISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAK 398

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A++VF RM  +DV+SW+T+  GF+    P +  +++ +      +PN +T   L
Sbjct: 399 CYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINL 458

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C    +L        +A+  GF  E  V ++++ M+ +CG +  +   FD ++ KNI
Sbjct: 459 LEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNI 518

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW+ +++ Y  N    + L  F  +   G++ N  T   V+  C            HG 
Sbjct: 519 VTWSAMIAAYGMNGLAHEALALFAEMKRHGLKPNPVTTLSVLAACS-----------HGG 567

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +++ G         SL KS V    L+  FE            +  M+  L   G    A
Sbjct: 568 LVEEGL--------SLFKSMVQELGLEPGFEH-----------YSCMVDMLGRAGKLDTA 608

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           + +  ++ +   K    I G++L++C + G  +  K     V++L
Sbjct: 609 IEVIKAMPD-NLKNGASIWGSLLSACRSYGLTELGKEAISRVLEL 652



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 192/392 (48%), Gaps = 14/392 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D + +   L    + +    G  VHG ++  GF  D+F++N+LI MYSKC   G   
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+E+++RN VSW  ++S  + N  +     +   M+      +E  + +++++C    
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                 SIHC  ++   E N  V  ++++ YAK   +  A  VF  +   DV  W+ MI 
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+AHCG   EA+ V   M  + +  +  T IN L+ CS+ A+    +  HG+ IR     
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFAS 485

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +++  A++DMY K   +  + + F+++A K++++W+ +   +  N    +  +LF +  
Sbjct: 486 EVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMK 545

Query: 340 LSGSRPNHVTFSILLRQC--GKLLDLDLGL---QLQCLALHCGFLDEENVTSSLIYMFCR 394
             G +PN VT   +L  C  G L++  L L    +Q L L  GF       S ++ M  R
Sbjct: 546 RHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGF----EHYSCMVDMLGR 601

Query: 395 CG----AVEMAHSVFDNVSYKNITTWNELLSG 422
            G    A+E+  ++ DN+     + W  LLS 
Sbjct: 602 AGKLDTAIEVIKAMPDNLK-NGASIWGSLLSA 632


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 216/766 (28%), Positives = 375/766 (48%), Gaps = 38/766 (4%)

Query: 23  KRIHRLC--GN-------------NQFCSDSFLRKDPI-FLAKSLSLSENLKSRVLGTQV 66
           +R+H LC  GN             N   S S + K+ I  L ++    +N+    +G +V
Sbjct: 58  QRLHNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIH---VGRKV 114

Query: 67  HGHI-VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           H  +       ND+ L   +IAMYS CG       VFD   E++L  +  ++S   +N  
Sbjct: 115 HALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNAL 174

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           F   + +++++       P+ F +  V K C  +   E G ++H  ALK     + FVG 
Sbjct: 175 FRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGN 234

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI------GGYAHCGYGFEALNVVSSML 238
           +++  Y K G V +A +VF ++ + ++  WN+++      GG+  C   F+ L +     
Sbjct: 235 ALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEE-- 292

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            EG+  D  T +  +  C+ V +  +G  +HGL  +  +   +++ N+L+DMY K   + 
Sbjct: 293 -EGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLG 351

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQC 357
            A  +F+    K+V+SWNT+  G+S+  +      L  +       R N VT   +L  C
Sbjct: 352 EARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC 411

Query: 358 G---KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
               +LL L    ++   A   GFL +E V ++ +  + +C +++ A  VF  +  K ++
Sbjct: 412 SGEHQLLSLK---EIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVS 468

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN L+  +  N      L  F  + +SG++ +  T   ++  C R +  +   +IHG +
Sbjct: 469 SWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           ++ G     +I  SL+  Y+    +       +  E   +  W  M++         EA+
Sbjct: 529 LRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEAL 588

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
             F  ++  G KP E  +  +L +C+ + A +  K +H F +K   + + +V  A+ID Y
Sbjct: 589 DTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMY 648

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG ++ ++  FD+  N  D  V+N +I  Y  HG   +A+E+F+ M+    +P   TF
Sbjct: 649 AKCGCMEQSQNIFDR-VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + V+ AC+H GLV +G      M + YG++P  + Y C+VDML R G L +A  ++  MP
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMP 767

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +P   ++ SLLS CR +G+ E+GE  S+KLL L P     +VLLS
Sbjct: 768 DEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLS 813



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 256/532 (48%), Gaps = 18/532 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG   KLG T ++ + N+L+ MYSKCGY G    +FD    +N+VSW  I+    
Sbjct: 317 MGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYS 376

Query: 122 QNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + G+F    ++  +M +      NE  V +V+  C           IH +A +    K+ 
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  + +  YAK   +  AERVF  +    V  WNA+IG +A  G+  ++L++   M+  
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDS 496

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D++T  + L  C+ +     G++IHG ++R+ +E    I  +L+ +YI+ S M   
Sbjct: 497 GMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLG 556

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F++M +K ++ WN +  GFS+N+ P +    F + +  G +P  +  + +L  C ++
Sbjct: 557 KLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQV 616

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L LG ++   AL     ++  VT +LI M+ +CG +E + ++FD V+ K+   WN ++
Sbjct: 617 SALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVII 676

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQ---IHGA 473
           +GY  +      ++ F  +   G   +  TF  V+  C      +E  + +GQ   ++G 
Sbjct: 677 AGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGV 736

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSALVHQGHNHE 532
             K    +C      ++      GQL  + +  N   +  D   W +++S+  + G    
Sbjct: 737 KPKLEHYAC------VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEI 790

Query: 533 AVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              +   L+E    K + Y+L  + N  A +G +   + +   + + G + +
Sbjct: 791 GEEVSKKLLELEPNKAENYVL--LSNLYAGLGKWDEVRKVRQRMKENGLHKD 840


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 195/689 (28%), Positives = 332/689 (48%), Gaps = 1/689 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q H  ++  G   +  L   L+ MY  CG F     +F ++       W  ++     
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+FD  L  Y  M   G +P+++    V+K C  + +   G  +H     +  E + FV
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++ FY++ G +  A  +F  + S D   WN M+ GY   G    A  V   M     
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  TF   L  C+     + G Q+HGL++ S +E    + N L+ MY K   +  A +
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARR 304

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M   D+++WN +  G+ +N    + + LFH+ I +G +P+ +TFS  L    +   
Sbjct: 305 LFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGAT 364

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++ C  +  G   +  + S+LI ++ +C  VEMAH +FD  +  +I     ++SG
Sbjct: 365 LRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISG 424

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N  + + L+ F  + +  +  N  T   V+  C       +  ++HG I+K G    
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ S+++  Y   G+LD + +   G    D   W +M+++    G   EA+ +F  +  
Sbjct: 485 CYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGM 544

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           AG K D   +   L++CA + A    K IH F+++  F ++++  SA+ID Y+KCG++  
Sbjct: 545 AGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDL 604

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   FD     N+V  +N++I AY +HG + +++ +F  M    +QP   TF++++SAC 
Sbjct: 605 ACRVFDMMEEKNEV-SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 663

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G VD+G   F+ M  + G+    + Y C+VD+  R G L +A  +I  MPF P   V+
Sbjct: 664 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPK 751
              L          L +W  E  L+ + K
Sbjct: 724 GLYLELVDFMEMLSLQKWHQEIYLIWIHK 752



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 257/550 (46%), Gaps = 5/550 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG  VH  I  +GF  D+F+ ++LI  YS+ G       +FD M  ++ V W ++
Sbjct: 160 LNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVM 219

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  ++NG++D    ++++M+     PN      V+ VC S     FG  +H   +   +
Sbjct: 220 LNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL 279

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  V  ++L  YAK G +  A R+F  +   D+  WN MI GY   G+  EA  +   
Sbjct: 280 EMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHE 339

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  G+  D  TF + L   S  A    G++IH  IIR+ V   + + +ALID+Y K   
Sbjct: 340 MISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRD 399

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A K+F++    D++    +  G+  N        +F   +    R N VT + +L  
Sbjct: 400 VEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPA 459

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L LG +L    L  G      V S+++ M+ +CG +++AH  F  +S K+   W
Sbjct: 460 CAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCW 519

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++    N    + +  F  +  +G + +  +    +  C          +IH  +++
Sbjct: 520 NSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR 579

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             F S  +  S+LI  Y   G LD +    +  E  +  SW ++++A  + G   +++ +
Sbjct: 580 GAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNL 639

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDA 593
           FH ++  G +PD      I+++C   G  Q  + IH F     +LG    +   + ++D 
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAG--QVDEGIHYFRCMTEELGIMARMEHYACMVDL 697

Query: 594 YAKCGDIKGA 603
           + + G +  A
Sbjct: 698 FGRAGRLNEA 707



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 190/402 (47%), Gaps = 15/402 (3%)

Query: 10  FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
           F D+ SC FH                  + ++ D I  +  L L     +   G ++H +
Sbjct: 329 FMDEASCLFHEM--------------ISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCY 374

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           I++ G + D+FL++ LI +Y KC       ++FD+    ++V  T ++S  + NG  +  
Sbjct: 375 IIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNA 434

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L+++  +       N   + SV+  C  + A   G  +H   LK     + +VG ++++ 
Sbjct: 435 LEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDM 494

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK G +  A + F  IS  D  CWN+MI   +  G   EA+++   M   G   D  + 
Sbjct: 495 YAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSI 554

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             AL  C+ +     G++IH  ++R      +   +ALIDMY K   +D A +VF+ M +
Sbjct: 555 SAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEE 614

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ- 368
           K+ +SWN++   +  +     + +LFH  +  G +P+HVTF  ++  CG    +D G+  
Sbjct: 615 KNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHY 674

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +C+    G +      + ++ +F R G +  A  + +++ +
Sbjct: 675 FRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPF 716



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/491 (24%), Positives = 218/491 (44%), Gaps = 9/491 (1%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
            ++ LQ C+  +    GRQ H  ++ + +  +  +   L+ MY+       A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
                 WN +  GF+           + K +  G+ P+  TF  +++ CG L  + LG  
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +       GF  +  V SSLI  +   G +  A  +FD +  K+   WN +L+GY  N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             +    F  +  +    N  TF  V+  C          Q+HG ++ +G      + ++
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G L ++    +   + D+ +W  M+S  V  G   EA  +FH ++ AG KPD
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPD 348

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                + L   +     ++ K IH ++I+ G + +V++ SA+ID Y KC D++ A   FD
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFD 408

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           Q     D++V   +I  Y  +G+ + A+EIF  +    ++ +  T  SV+ AC+    + 
Sbjct: 409 QR-TPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 467

Query: 669 KGCLLFKS-MDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
            G  L    + + +G      CY    ++DM ++ G L D  H   I         + S+
Sbjct: 468 LGKELHGHILKNGHG----GSCYVGSAIMDMYAKCGKL-DLAHQTFIGISXKDAVCWNSM 522

Query: 726 LSGCRIHGNKE 736
           ++ C  +G  E
Sbjct: 523 ITSCSQNGKPE 533


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 192/673 (28%), Positives = 330/673 (49%), Gaps = 1/673 (0%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY + G       +F  +      +W  ++      G+F+  L  Y+ M   G  P+++ 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
              V+K C  + + + G  +H     + ++++ FVG S++  YA+ G ++ A+ +F +I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             D   WN M+ GY   G    A+ +   M    I  +  TF   L  C+  A  D+G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +HG+ +   +E    + N L+ MY K   +  A K+F+     D++SWN +  G+ +N  
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            G+   LF   I +G +P+ +TF+  L    +LL L    ++    +    + +  + S+
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI ++ +C  VEMA  +    S  +      ++SGY  N  + + L+ F  + +  ++  
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  +           +  ++HG+IIKT      ++ S+++  Y   G+LD +    N
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D   W +M+++    G   EA+ +F  +   G + D   +   L++CA + A   
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH  +IK    +++Y  S++ID YAKCG++  +R  FD+    N+V  +N++I AY 
Sbjct: 481 GKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEV-SWNSIISAYG 539

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +HG + E + +F +M    +QP   TF+ ++SAC H G VD+G   +  M  +YG+    
Sbjct: 540 NHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARM 599

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           + Y C+ DM  R G L++A   I  MPF P   V+ +LL  C IHGN EL E AS+ L  
Sbjct: 600 EHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659

Query: 748 LLPKNDAAHVLLS 760
           L P N   +VLL+
Sbjct: 660 LDPLNSGYYVLLA 672



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/638 (24%), Positives = 296/638 (46%), Gaps = 15/638 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LKS  +G  VH  +  +G   D+F+ ++LI +Y++ G+      +FD + +++ V W ++
Sbjct: 71  LKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVM 130

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  ++NG+    +K++++M+ +   PN      V+ VC S    + G  +H  A+   +
Sbjct: 131 LNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGL 190

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  V  ++L  Y+K   + AA ++F +    D+  WN +I GY   G   EA ++   
Sbjct: 191 ELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRG 250

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  GI  D  TF + L   + +      ++IHG IIR  V   + + +ALID+Y K   
Sbjct: 251 MISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRD 310

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A K+  + +  D +   T+  G+  N    +    F   +    +P  VTFS +   
Sbjct: 311 VEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPA 370

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
              L  L+LG +L    +     ++ +V S+++ M+ +CG +++A  VF+ ++ K+   W
Sbjct: 371 FAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICW 430

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++    N    + +  F  +   G   +  +    +  C          +IHG +IK
Sbjct: 431 NSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK 490

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
               S  Y  SSLI  Y   G L+ S    +  +  +  SW +++SA  + G   E + +
Sbjct: 491 GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLAL 550

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           FH ++  G +PD      I+++C   G  Q  + I  + +     TE Y   A ++ YA 
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAG--QVDEGIRYYHLM----TEEYGIPARMEHYAC 604

Query: 597 CGDIKGARMAFDQSFNS-------NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
             D+ G     D++F +        D  V+ TL+ A   HG V E  E+  K  L +L P
Sbjct: 605 VADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNV-ELAEVASK-HLFDLDP 662

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             + +  +++         +  L  +S+  + G++  P
Sbjct: 663 LNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 233/494 (47%), Gaps = 14/494 (2%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ + +  A  LS+  +     LGTQ+HG  V  G   D  + N L+AMYSKC     
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQA 212

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             ++FD   + +LVSW  I+S  +QNG       ++  M + G  P+     S +     
Sbjct: 213 ARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + + +    IH + ++  +  + F+  ++++ Y K  DV  A+++    SS D      M
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTM 332

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY   G   EAL     ++ E +     TF +     + +A  ++G+++HG II++++
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           +    + +A++DMY K   +D A +VF R+ +KD I WN++    S+N  PG+  +LF +
Sbjct: 393 DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQ 452

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             + G+R + V+ S  L  C  L  L  G ++  L +      +    SSLI M+ +CG 
Sbjct: 453 MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGN 512

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  +  VFD +  +N  +WN ++S Y  +    + L  F  +  +G++ +  TF  ++  
Sbjct: 513 LNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISA 572

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV-------NFGQLDNSFEFSNGAE 510
           C  +      GQ+   I      +  Y   + ++ Y          G+LD +FE  N   
Sbjct: 573 CGHA------GQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMP 626

Query: 511 -RLDMASWGAMMSA 523
              D   WG ++ A
Sbjct: 627 FPPDAGVWGTLLGA 640


>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 197/690 (28%), Positives = 341/690 (49%), Gaps = 45/690 (6%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           T  IFL NNLI++Y   G      +VF EM +RN+VS+  I+    +NG  +    ++ +
Sbjct: 85  TQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSE 144

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLG 194
           M+  GF P +     ++  C S+  S+ G+ +    +K  +   +P+ G ++L+ + + G
Sbjct: 145 MRRYGFEPTQHTFAGLLS-CASLKLSQ-GFQLQAQMVKSGLFHADPYAGTALLSLFGRNG 202

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +      F  +   ++  WN +I  + + G+  E++ +   ++  G  + + +F+  L 
Sbjct: 203 CIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLS 262

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           G +   D ++G Q+H L+I++  +C +S++N+LI+MY+K S +  A K+FE    +DV+S
Sbjct: 263 GFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVS 322

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WNT+ G  ++++ P +   LF K  L G  PN  TF  ++  C  L  L  G  +    +
Sbjct: 323 WNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVI 382

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC-CDADVL 433
                    V S+L+  + +C  +E AH  FD +  KN+  WN L+ GY   C     +L
Sbjct: 383 RNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCFSSVSLL 442

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           K    +   G   N  +F   +++    E QQ+    H  I++ G+    Y+ S+LI SY
Sbjct: 443 KRMLQL---GYCPNEFSFSAALKSSLVFELQQL----HCLIMRMGYQQNEYVSSALITSY 495

Query: 494 VNFGQLDNSFEFSNGA--------------------------------ERLDMASWGAMM 521
              G + ++  F   +                                E  D+ SW  ++
Sbjct: 496 AKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNILI 555

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A    G   E   +F  +  A   PD Y + ++L+ C  +       SIH F+IK  F 
Sbjct: 556 AACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFK 615

Query: 582 -TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             + +V + +ID Y KCG I+ +   F++    N +I +  LI A   +G  +EA+++F 
Sbjct: 616 FCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERN-IITWTALISALGVNGYANEALKLFR 674

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M+    +P     V+V SAC H GLV +G  LF  M    G++P+ D Y C+VD+L+R 
Sbjct: 675 EMESLGFKPDGVALVAVFSACRHGGLVKEGMELFWQMKKSCGIEPNIDHYHCVVDLLARC 734

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
           G+L++A+ VI  MPF P+  ++RS L GC+
Sbjct: 735 GHLQEAEQVISNMPFPPNALIWRSFLEGCK 764



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 147/592 (24%), Positives = 267/592 (45%), Gaps = 44/592 (7%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+   +VK G F  D +    L++++ + G     +  F+EM ++NLV+W  ++S   
Sbjct: 171 GFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFG 230

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G  +  + ++ ++   G   +E +   V+    S    E G  +H   +K   +    
Sbjct: 231 NYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVS 290

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++N Y K   +  AE++F      DV  WN MIG  A      + L +   M  +G
Sbjct: 291 VLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDG 350

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ TF++ +  C+ +     G  IH  +IR+++E ++ + +AL+D Y K   ++ A 
Sbjct: 351 VLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAH 410

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + +K+V+ WN L  G+S NK    + SL  + +  G  PN  +FS  L+    + 
Sbjct: 411 CCFDEIDEKNVVCWNALILGYS-NKC-FSSVSLLKRMLQLGYCPNEFSFSAALKS-SLVF 467

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK---------- 411
           +L    QL CL +  G+   E V+S+LI  + + G +  A  +FD  S K          
Sbjct: 468 ELQ---QLHCLIMRMGYQQNEYVSSALITSYAKNGIISDA-LIFDAASNKPLLVGPSNAI 523

Query: 412 -----------------------NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
                                  +I +WN L++    N    +V + F ++  + +  + 
Sbjct: 524 AGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDN 583

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSN 507
            T   ++  C +  N  +   IHG IIKT F  C  ++ + LI  Y   G +++S +  N
Sbjct: 584 YTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFN 643

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                ++ +W A++SAL   G+ +EA+ +F  +   G KPD   L  + ++C   G  + 
Sbjct: 644 KIIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKE 703

Query: 568 TKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAF-DQSFNSNDVI 617
              +   + K  G    +     V+D  A+CG ++ A     +  F  N +I
Sbjct: 704 GMELFWQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALI 755



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 212/450 (47%), Gaps = 50/450 (11%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  ++K GF  ++ + N+LI MY KC       ++F+    R++VSW  ++ A  
Sbjct: 272 LGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALA 331

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      L++++ M  +G +PNE    SV+  C ++    FG  IH   ++ +IE N F
Sbjct: 332 KSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVF 391

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++FYAK  ++ +A   F  I   +V CWNA+I GY++    F +++++  ML  G
Sbjct: 392 VGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSN--KCFSSVSLLKRMLQLG 449

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              ++++F  AL+  SLV +    +Q+H LI+R   + +  + +ALI  Y K+  +  A 
Sbjct: 450 YCPNEFSFSAALKS-SLVFEL---QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDAL 505

Query: 302 --------------------------------KVFERMADKDVISWNTLFGGFSENKNPG 329
                                            +F  + + D++SWN L    + N +  
Sbjct: 506 IFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYK 565

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSL 388
           +   LF    ++   P++ T   LL  C KL +L LG  +    +   F   +  V + L
Sbjct: 566 EVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVL 625

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +CG +E +  +F+ +  +NI TW  L+S    N    + LK F  +   G + +G
Sbjct: 626 IDMYGKCGCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLFREMESLGFKPDG 685

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
                V   C            HG ++K G
Sbjct: 686 VALVAVFSAC-----------RHGGLVKEG 704



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/403 (22%), Positives = 173/403 (42%), Gaps = 43/403 (10%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL+  V G  +H  +++    +++F+ + L+  Y+KC         FDE+ E+N+V W  
Sbjct: 367 NLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNA 426

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++     N  F   + +   M   G+ PNEF+  + +K  +     +    +HC  +++ 
Sbjct: 427 LI-LGYSNKCFS-SVSLLKRMLQLGYCPNEFSFSAALKSSLVFELQQ----LHCLIMRMG 480

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAA--------------------------------ERVF 203
            ++N +V  +++  YAK G ++ A                                + +F
Sbjct: 481 YQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLF 540

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   D+  WN +I   A  G   E   +   M    I  D YT ++ L  C+ + +  
Sbjct: 541 SLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLA 600

Query: 264 IGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           +G  IHG II+++ + C   + N LIDMY K   ++ + K+F ++ ++++I+W  L    
Sbjct: 601 LGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERNIITWTALISAL 660

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLD 380
             N    +   LF +    G +P+ V    +   C  G L+   + L  Q +   CG   
Sbjct: 661 GVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGMELFWQ-MKKSCGIEP 719

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
             +    ++ +  RCG ++ A  V  N+ +  N   W   L G
Sbjct: 720 NIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEG 762



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 3/173 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           LS+   L +  LG+ +HG I+K  F   D F+ N LI MY KCG     L++F+++ ERN
Sbjct: 590 LSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERN 649

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +++WT ++SA   NG  +  LK++ +M++ GF P+  A+ +V   C   G  + G  +  
Sbjct: 650 IITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSACRHGGLVKEGMELFW 709

Query: 170 FALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
              K   IE N      V++  A+ G +  AE+V  ++    +   W + + G
Sbjct: 710 QMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQVISNMPFPPNALIWRSFLEG 762


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 206/654 (31%), Positives = 328/654 (50%), Gaps = 31/654 (4%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK--NPFVGCSVLNFYAKL 193
           M  +GF P+ FA  +V+K    +     G  IH    K       +  +  +++N Y K 
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +  A +VF  I+  D   WN++I           A+     ML EG     +T ++  
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 254 QGCSLVADFD---IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             CS +   D   +G+QIHG   R     + S  NAL+ MY K   +D A  +     D+
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D+++WN++   FS+N+   +        +L G +P+ VTF+ +L  C  L  L  G ++ 
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 371 CLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             AL    + E + V S+L+ M+C CG VE    VFD+V  + I  WN +++GY  +  D
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 430 ADVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
              L  F  +   +G+  N  T   +V    R E       IHG +IK G  +  Y+ ++
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-- 546
           LI  Y   G +  S    +  E  D+ SW  ++++ V  G + +A+ + H +    EK  
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419

Query: 547 --------------PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
                         P+   L T+L  CA++ A  + K IH + I+    ++V V SA++D
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVD 479

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-----KLANL 647
            YAKCG +  AR  FDQ    N VI +N +IMAY  HG   E++E+F+ M     K   +
Sbjct: 480 MYAKCGCLNLARRVFDQMPIRN-VITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEV 538

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P++ TF+++ ++CSH G+VD+G  LF  M +++G++P+PD Y C+VD++ R G +E+A 
Sbjct: 539 KPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAY 598

Query: 708 HVIEIMPFQPSPT-VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++  MP        + SLL  CRI+ N E+GE A+E LL L P   + +VLLS
Sbjct: 599 GLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLS 652



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 160/662 (24%), Positives = 295/662 (44%), Gaps = 41/662 (6%)

Query: 62  LGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           LG Q+H H+ K G+ +   + + N L+ MY KCG  G   +VFD + ER+ VSW  I+SA
Sbjct: 28  LGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISA 87

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIH--CFALKI 174
             +  E+++ +K +  M   GF P+ F + S+   C ++   +    G  IH  CF    
Sbjct: 88  LCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFR--- 144

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           +     F   +++  YAKLG +  A+ +       D+  WN+MI  ++      EAL  +
Sbjct: 145 KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFL 204

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIK 293
             M+ EG+  D  TF + L  CS +     G++IH   +R++     S V +AL+DMY  
Sbjct: 205 RLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCN 264

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF-ILSGSRPNHVTFSI 352
              ++    VF+ + D+ +  WN +  G++++++  +   LF +    +G   N  T S 
Sbjct: 265 CGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSS 324

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           ++    +   +     +    +  G      + ++LI M+ R G ++ +  +FD++  ++
Sbjct: 325 IVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRD 384

Query: 413 ITTWNELLSGY--CFNCCDADVL----------KTFCNIWESGVEV----NGCTFFYVVE 456
           I +WN +++ Y  C    DA +L           T+   +    +V    N  T   V+ 
Sbjct: 385 IVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLP 444

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C          +IH   I+   +S   + S+L+  Y   G L+ +    +     ++ +
Sbjct: 445 GCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVIT 504

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGE-----KPDEYILGTILNSCAAIGAYQRTKSI 571
           W  ++ A    G   E++ +F  +V  G      KP E     +  SC+  G      S+
Sbjct: 505 WNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSL 564

Query: 572 -HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI-VYNTLIMA-YAH 628
            H    + G        + ++D   + G ++ A    +   +  D +  +++L+ A   +
Sbjct: 565 FHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIY 624

Query: 629 HGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           H +  E  EI  +  L  LQP  A+ +V + +  S  GL DK   L + M +  G++  P
Sbjct: 625 HNI--EIGEIAAE-NLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAM-GVKKEP 680

Query: 688 DC 689
            C
Sbjct: 681 GC 682



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + + I L   L    +L +   G ++H + ++    + + + + L+ MY+KCG      
Sbjct: 432 FKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLAR 491

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-----FMPNEFAVGSVMKV 154
           RVFD+M  RN+++W +I+ A   +G+    L+++ DM   G       P E    ++   
Sbjct: 492 RVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFAS 551

Query: 155 CVSMGASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDV 211
           C   G  + G S+ H    +  IE  P     +++   + G V  A  +  ++ S  D V
Sbjct: 552 CSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKV 611

Query: 212 GCWNAMIGG 220
           G W++++G 
Sbjct: 612 GAWSSLLGA 620


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 211/762 (27%), Positives = 372/762 (48%), Gaps = 14/762 (1%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           N    S  FLR     L K+LS ++N         VH  I+  G +  +     LI+ Y+
Sbjct: 12  NTPEPSQEFLRSS---LLKTLSSAKNTPQL---RTVHSLIITSGLSLSVIFSGKLISKYA 65

Query: 91  KCGYFGWGLRVFDEMAERNLVS-WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           +       + VF  ++  N V  W  I+ A   NG F   L  Y +M+     P+ F   
Sbjct: 66  QVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFP 125

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+  C  +   E G  +H  A+++  E + ++G ++++ Y++  D+  A  VF  +S+ 
Sbjct: 126 SVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNR 185

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D   WN++I GY   G+  +AL++       G+  D +T  + L  C  +     G  +H
Sbjct: 186 DSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVH 245

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G+I +  +   + I N L+ MY K   +  A +VF +MA KD ++WNT+  G+++     
Sbjct: 246 GVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHE 305

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
            +  LF   I  G  P+ ++ +  +R CG+  DL +G  +    +  GF  +    + LI
Sbjct: 306 ASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILI 364

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A  VFD    K+  TWN L++GY  +    + L++F  + +   + +  
Sbjct: 365 DMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSV 423

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++    +  +      IH  +IK GF +   I +SL+  Y   G++D+  +  +  
Sbjct: 424 TFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYM 483

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  ++++ VH         + + +   G  PDE  +  IL  C+ +   ++ K
Sbjct: 484 SAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH ++ K GF + V + +A+I+ Y+KCG ++     F +     DV+ +  LI A+  +
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVF-KYMKEKDVVTWTALISAFGMY 602

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   +A++ F  M+L+ + P    F++ + ACSH G+V +G   F  M + Y ++P  + 
Sbjct: 603 GEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEH 662

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L+R+G L  A+  I  MP +P  +++ +LLS CR  GN  + +  S+K+L L 
Sbjct: 663 YACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELN 722

Query: 750 PKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLE 791
             +   +VL+S         L   + V  V + +KT  LK E
Sbjct: 723 SDDTGYYVLVS----NIYATLGKWDQVKTVRNSMKTKGLKKE 760


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/715 (26%), Positives = 358/715 (50%), Gaps = 12/715 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L S   G  +HG + KLG      + N LIA+YS+CG     ++VFD M  R+ +SW  
Sbjct: 210 SLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNS 269

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-- 173
            +S    NG  D  + ++  M + G   +   V SV+  C  +G    G  +H +++K  
Sbjct: 270 TISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSG 329

Query: 174 -------IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCG 225
                  ++   +  +G  ++  Y K GD+ +A RVF ++ S  +V  WN ++GGYA   
Sbjct: 330 LLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAA 389

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              E+L +   M   GIT D++     L+  + ++    G   HG +++       ++ N
Sbjct: 390 EFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCN 449

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALI  Y KS+ +D A  VF+RM  +D ISWN++  G + N    +   LF +  + G   
Sbjct: 450 ALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHEL 509

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T   +L  C +     +G  +   ++  G + E ++ ++L+ M+  C      + +F
Sbjct: 510 DSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIF 569

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            N++ KN+ +W  +++ Y        V      +   G++ +      V+      E+ +
Sbjct: 570 RNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLK 629

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               +HG  I+ G      + ++L++ YVN   ++ +    +     D+ SW  ++    
Sbjct: 630 QGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYS 689

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
                +E+ ++F  ++    KP+   +  IL + A+I + +R + IH + ++ GF  + Y
Sbjct: 690 RNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSY 748

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
            ++A++D Y KCG +  AR+ FD+     ++I +  +I  Y  HG   +A+ +F++M+ +
Sbjct: 749 TSNALVDMYVKCGALLVARVLFDR-LTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGS 807

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P  A+F +++ AC H GL  +G   F +M  +Y ++P    Y C+VD+LS  G L++
Sbjct: 808 GVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKE 867

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A   IE MP +P  +++ SLL GCRIH + +L E  ++++  L P+N   +VLL+
Sbjct: 868 AFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLA 922



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 295/602 (49%), Gaps = 14/602 (2%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAER--NLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           L   L+  Y KCG  G    VFDEM  R  ++  WT ++SA  + G+F  G+ ++  M+ 
Sbjct: 132 LGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQC 191

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  P+  AV  V+K   S+G+   G  IH    K+ + +   V  +++  Y++ G +  
Sbjct: 192 CGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMED 251

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A +VF S+ + D   WN+ I GY   G+   A+++ S M  EG  +   T ++ L  C+ 
Sbjct: 252 AMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAE 311

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALID---------MYIKSSGMDYAFKVFERMAD 309
           +    +G+ +HG  ++S +   +  V + ID         MY+K   M  A +VF+ M  
Sbjct: 312 LGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPS 371

Query: 310 K-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           K +V  WN + GG+++     ++  LF +    G  P+    S LL+    L     GL 
Sbjct: 372 KGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLV 431

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
                +  GF  +  V ++LI  + +   ++ A  VFD + +++  +WN ++SG   N  
Sbjct: 432 AHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGL 491

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           +++ ++ F  +W  G E++  T   V+  C RS    +   +HG  +KTG      + ++
Sbjct: 492 NSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANA 551

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y N     ++ +      + ++ SW AM+++    G   +   +   +V  G KPD
Sbjct: 552 LLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPD 611

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
            + + ++L+  A   + ++ KS+H + I+ G    + VA+A+++ Y  C +++ AR+ FD
Sbjct: 612 VFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFD 671

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
              N  D+I +NTLI  Y+ +   +E+  +F  M L   +P+  T   ++ A +    ++
Sbjct: 672 HVTN-KDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILPAVASISSLE 729

Query: 669 KG 670
           +G
Sbjct: 730 RG 731


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 183/710 (25%), Positives = 355/710 (50%), Gaps = 13/710 (1%)

Query: 63  GTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+H  +  L    +D+ + N ++ MY KC      + VF EM ER+L+SW   ++A  
Sbjct: 118 GKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANA 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++G++   L +   M+  G  P++    S +  C+   +   G  IH   L+  +E +  
Sbjct: 178 ESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVV 237

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G +++  Y + G + +A  +F+ +   +V  WNAM+       +  EA+ +   M+   
Sbjct: 238 LGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 297

Query: 242 -ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +   + +FI  L   +       GR+IH +I   ++   I + NAL+ MY +  G+  A
Sbjct: 298 MVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDA 357

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF  M  +D++SWN +   ++++    +  +LFH+       P+ +TF + L  C ++
Sbjct: 358 ERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEI 417

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA--------VEMAHSVFDNVSYKN 412
            DLD G  +  L++  GF    +V ++ ++++  C +        +E+   +F++++ ++
Sbjct: 418 RDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARD 477

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +WN +++GY         L  F  +   G+  N  TF  ++  C      +    IH 
Sbjct: 478 VISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHR 537

Query: 473 AIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            +I      SS   + ++++  Y   G+LD +          ++ASW +M+SA    G  
Sbjct: 538 RVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRA 597

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            +A  +   +   G  PD     T+LN+C A GA +  K IH  +I  G   +  VA+A+
Sbjct: 598 EQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANAL 657

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ++ Y+KCG++  A   F  + +  DV+ +N +I  +AH+G   EA++    M+   ++P 
Sbjct: 658 VNFYSKCGNLDTATSLFG-ALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPD 716

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF++++SA SH G + +G   F SM   + ++   + YGC++D+L R G + DA++ +
Sbjct: 717 AITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFV 776

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             M  +     + +LLS C +HG++E  +  +  ++ + P++ +A+V LS
Sbjct: 777 SAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALS 826



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/670 (26%), Positives = 328/670 (48%), Gaps = 22/670 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VHGH+ +      +F  N L+ MY +C       +VFD M ER++VSWT ++SA  Q
Sbjct: 17  GRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQ 76

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF--ALKIRIEKNP 180
            G     L ++ +M  +   PN     ++++ C S    E G  IH    AL++ +E + 
Sbjct: 77  TGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQL-LESDV 135

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLF 239
            V  +V+  Y K      A  VF  +   D+  WN  I   A  G Y F  L ++ SM  
Sbjct: 136 PVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTF-TLALLKSMQL 194

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+  DK TF++AL  C        GR IH L++   +E  + +  AL+ MY +   ++ 
Sbjct: 195 EGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLES 254

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCG 358
           A ++F RM +++V+SWN +    + N +  +   LF + + ++   P  V+F  +L    
Sbjct: 255 AREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVT 314

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               L  G ++  +      L +  V ++L+ M+ RCG V  A  VF  +  +++ +WN 
Sbjct: 315 TPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNA 374

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S Y  +    +V+  F  +    V  +  TF   ++ C    +      +H   +++G
Sbjct: 375 MISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESG 434

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFE---------FSNGAERLDMASWGAMMSALVHQGH 529
           F SC  + ++ +  Y +     +S           F + A R D+ SW  M++  V  G 
Sbjct: 435 FGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAAR-DVISWNTMITGYVQAGD 493

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVA 587
           +  A++IF  ++  G + ++    ++L+ C +    ++ ++IH  VI      +++  VA
Sbjct: 494 SFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVA 553

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+++ Y KCG++  AR  F+ + + N +  +N++I AYA HG   +A ++ ++M+   +
Sbjct: 554 AAIVNMYGKCGELDTARHLFEDTSHRN-LASWNSMISAYALHGRAEQAFDLSERMRREGV 612

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            P + TF+++++AC   G V  G ++  + +DS  G++        LV+  S+ G L+ A
Sbjct: 613 LPDRVTFITLLNACVAGGAVRHGKMIHARIIDS--GLEKDTVVANALVNFYSKCGNLDTA 670

Query: 707 KHVIEIMPFQ 716
             +   + ++
Sbjct: 671 TSLFGALDYR 680



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 282/605 (46%), Gaps = 11/605 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +M+ C   GA E G  +H    +   +++ F G  ++N Y +   +  A +VF  +   D
Sbjct: 4   LMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERD 63

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W AMI  YA  G+  +AL++ + M    +  ++ TF+  L+ C      + G+QIH 
Sbjct: 64  VVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHA 123

Query: 271 LIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            +   + +E  + + NA++ MY K    D A  VF  M ++D+ISWN      +E+ +  
Sbjct: 124 RVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYT 183

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
            T +L     L G  P+ VTF   L  C     L  G  +  L L  G   +  + ++L+
Sbjct: 184 FTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALV 243

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNG 448
            M+ RCG +E A  +F  +  +N+ +WN +++    N   A+ ++ F   +  + VE   
Sbjct: 244 TMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTR 303

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            +F  V+      E      +IH  I +    S   + ++L+  Y   G + ++    + 
Sbjct: 304 VSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSA 363

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            ER D+ SW AM+SA    G   E V +FH +      PD       L++CA I      
Sbjct: 364 MERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSG 423

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD-------QSFNSNDVIVYNT 621
           +++H   ++ GF + + VA+A +  Y+ C     +  +         +S  + DVI +NT
Sbjct: 424 RTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNT 483

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I  Y   G    A+ IF +M L  ++ +Q TF+S++S C  +  + +G  + + + +Q 
Sbjct: 484 MITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQT 543

Query: 682 G-MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
             +   P     +V+M  + G L+ A+H+ E    +   + + S++S   +HG  E    
Sbjct: 544 PELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLAS-WNSMISAYALHGRAEQAFD 602

Query: 741 ASEKL 745
            SE++
Sbjct: 603 LSERM 607



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 210/437 (48%), Gaps = 4/437 (0%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +   ++ C +    + GR++HG + R   + S+   N L++MY + S +D A KVF+RM 
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           ++DV+SW  +   +++  +  Q   LF +   S   PN VTF  LL  C     L+ G Q
Sbjct: 61  ERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQ 120

Query: 369 LQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           +         L+ +  V ++++ M+ +C   ++A +VF  +  +++ +WN  ++    + 
Sbjct: 121 IHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESG 180

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                L    ++   G+  +  TF   +  C  S +      IH  +++ G      + +
Sbjct: 181 DYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGT 240

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEK 546
           +L+  Y   G L+++ E  +     ++ SW AM+++     H  EA+ +F  +V  A  +
Sbjct: 241 ALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVE 300

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P      T+LN+     A    + IH  + +    +++ VA+A++  Y +CG +  A   
Sbjct: 301 PTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERV 360

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F  +    D++ +N +I AYA  GL  E + +F +M+   + P + TF+  + AC+    
Sbjct: 361 F-SAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRD 419

Query: 667 VDKGCLLFK-SMDSQYG 682
           +D G  +   S++S +G
Sbjct: 420 LDSGRTVHHLSVESGFG 436


>gi|449458803|ref|XP_004147136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 638

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 184/499 (36%), Positives = 272/499 (54%), Gaps = 40/499 (8%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G Q+HG + +   +     +N L+ MY +   M   FKVFE M  ++V+SW+ +    S+
Sbjct: 144 GAQVHGHMCKLGFDYDTFSMNNLLKMYCRCGFMCEGFKVFEEMPQRNVVSWSLITSSLSK 203

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N         F + +  G  P    F  +++ C  +     G  + CL+   G      V
Sbjct: 204 NGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFV 263

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
             S + M+ R G +  A  VF+ +   ++  WN ++ GY       + L     +   G+
Sbjct: 264 GGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTNCGLSLEALSAVSLLNSEGI 323

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           +++  T    ++ C   ++     ++HG I++ G  S   + ++L+  Y+   + ++  +
Sbjct: 324 KMDKFTIVSAIKACSLIQDLDSGKELHGFILRRGLISTAAM-NALMDMYLISDRKNSVLK 382

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             N  +  D+ SW  +        +  E V +F                           
Sbjct: 383 IFNSMQTRDIISWNTVFGG---SSNEKEIVDLFG-------------------------- 413

Query: 565 YQRTKSIHPFVI--KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                    FVI  K+GF   V+VASA+IDAYAKCGDI  A+ AF+QS  SNDVIVYN++
Sbjct: 414 --------KFVIEEKMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSM 465

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           +MAYAHHGL  EA++ F+KM++A +QPSQA+FVSV+SAC H GLV++G  LF++M S Y 
Sbjct: 466 MMAYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISACGHMGLVEQGRSLFQTMKSDYN 525

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           M PS D YGCLVDMLSRNG+L DA+++IE MPF P P + RSLLSGCRI+GN+ELG+W +
Sbjct: 526 MTPSRDNYGCLVDMLSRNGFLYDARYIIESMPFSPWPAILRSLLSGCRIYGNRELGQWTA 585

Query: 743 EKLLLLLPKNDAAHVLLSK 761
           EKLL L P+N A HVLLSK
Sbjct: 586 EKLLSLAPQNLATHVLLSK 604



 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 154/397 (38%), Positives = 229/397 (57%), Gaps = 37/397 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHGH+ KLGF  D F  NNL+ MY +CG+   G +VF+EM +RN+VSW+LI S+  +
Sbjct: 144 GAQVHGHMCKLGFDYDTFSMNNLLKMYCRCGFMCEGFKVFEEMPQRNVVSWSLITSSLSK 203

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NGEF++ L+ +++M  +G MP EFA GSVMK C  + A  FG  +HC + KI +E+N FV
Sbjct: 204 NGEFELCLESFLEMMRDGLMPTEFAFGSVMKACADVEAYGFGSGVHCLSWKIGMEQNVFV 263

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S L+ YA+LGD+ +AE VF  +   DVGCWNAMIGGY +CG   EAL+ VS +  EGI
Sbjct: 264 GGSTLSMYARLGDITSAELVFEWMEKVDVGCWNAMIGGYTNCGLSLEALSAVSLLNSEGI 323

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            MDK+T ++A++ CSL+ D D G+++HG I+R  +  S + +NAL+DMY+ S   +   K
Sbjct: 324 KMDKFTIVSAIKACSLIQDLDSGKELHGFILRRGL-ISTAAMNALMDMYLISDRKNSVLK 382

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M  +D+ISWNT+FGG S  K   +   LF KF++                      
Sbjct: 383 IFNSMQTRDIISWNTVFGGSSNEK---EIVDLFGKFVIEE-------------------- 419

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELLS 421
                         GF    +V S++I  + +CG +  A   F+     N +  +N ++ 
Sbjct: 420 ------------KMGFGFHVHVASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMM 467

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            Y  +    + ++TF  +  + V+ +  +F  V+  C
Sbjct: 468 AYAHHGLAWEAIQTFEKMRIAKVQPSQASFVSVISAC 504



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 45/263 (17%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           K+ SL ++L S   G ++HG I++ G  +   + N L+ MY         L++F+ M  R
Sbjct: 335 KACSLIQDLDS---GKELHGFILRRGLISTAAM-NALMDMYLISDRKNSVLKIFNSMQTR 390

Query: 109 NLVSWTLIVSAAIQNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           +++SW  +   +    E  D+  K  ++ K                    MG   FG+ +
Sbjct: 391 DIISWNTVFGGSSNEKEIVDLFGKFVIEEK--------------------MG---FGFHV 427

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVGCWNAMIGGYAHCGY 226
           H             V  ++++ YAK GD+ +A+  F  S  S+DV  +N+M+  YAH G 
Sbjct: 428 H-------------VASAIIDAYAKCGDIGSAQGAFEQSCQSNDVIVYNSMMMAYAHHGL 474

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN- 285
            +EA+     M    +   + +F++ +  C  +   + GR +    ++S+   + S  N 
Sbjct: 475 AWEAIQTFEKMRIAKVQPSQASFVSVISACGHMGLVEQGRSLFQ-TMKSDYNMTPSRDNY 533

Query: 286 -ALIDMYIKSSGMDYAFKVFERM 307
             L+DM  ++  +  A  + E M
Sbjct: 534 GCLVDMLSRNGFLYDARYIIESM 556


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 1135

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 212/684 (30%), Positives = 334/684 (48%), Gaps = 32/684 (4%)

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+   W  ++ +   +  F   +  Y  M      P+ FA  +V+K   ++     G  
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351

Query: 167 IHCFALKI--RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           IH    K       +  V  S++N Y K GD+ AA +VF  I   D   WN+MI      
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADFDIGRQIHGLIIRSEVECSISI 283
                +L++   ML E +    +T ++    CS V     +G+Q+H   +R+  +     
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYT 470

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+ MY +   ++ A  +F     KD++SWNT+    S+N    +     +  I+ G 
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAH 402
           RP+ VT + +L  C +L  L +G ++ C AL  G L E + V ++L+ M+C C   +   
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRS 461
            VFD V  + +  WN LL+GY  N  D   L+ F   I ES    N  TF  V+  C R 
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           +       IHG I+K GF    Y+ ++L+  Y   G+++ S        + D+ SW  M+
Sbjct: 651 KVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMI 710

Query: 522 SALVHQGHNHEAVTIFHSLVE-AGE-----------------KPDEYILGTILNSCAAIG 563
           +  +  G   +A+ + H +    GE                 KP+   L T+L  CAA+ 
Sbjct: 711 TGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALA 770

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  + K IH + +K     +V V SA++D YAKCG +  A   FDQ    N VI +N LI
Sbjct: 771 ALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRN-VITWNVLI 829

Query: 624 MAYAHHGLVSEAMEIFDKMKLAN------LQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
           MAY  HG   EA+E+F  M          ++P++ T++++ +ACSH G+VD+G  LF +M
Sbjct: 830 MAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTM 889

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKE 736
            + +G++P  D Y CLVD+L R+G +++A  +I  MP   +    + SLL  CRIH + E
Sbjct: 890 KASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVE 949

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
            GE A++ L +L P   + +VL+S
Sbjct: 950 FGEIAAKHLFVLEPNVASHYVLMS 973



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 163/660 (24%), Positives = 285/660 (43%), Gaps = 36/660 (5%)

Query: 62   LGTQVHGHIVKLGFT--NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
            LG Q+H H+ K G    + + + N+L+ MY KCG      +VFD++ +R+ VSW  +++ 
Sbjct: 348  LGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIAT 407

Query: 120  AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEK 178
              +  E+++ L ++  M +    P  F + SV   C  + G    G  +H + L+   + 
Sbjct: 408  LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR-NGDL 466

Query: 179  NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
              +   +++  YA+LG V  A+ +F      D+  WN +I   +      EAL  V  M+
Sbjct: 467  RTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMI 526

Query: 239  FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGM 297
             +G+  D  T  + L  CS +    IGR+IH   +R+      S V  AL+DMY      
Sbjct: 527  VDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQP 586

Query: 298  DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQ 356
                 VF+ +  + V  WN L  G++ N+   Q   LF + I      PN  TF+ +L  
Sbjct: 587  KKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646

Query: 357  CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            C +         +    +  GF  ++ V ++L+ M+ R G VE++ ++F  ++ ++I +W
Sbjct: 647  CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSW 706

Query: 417  NELLSG--YCFNCCDA-------------DVLKTFCNIWESG---VEVNGCTFFYVVETC 458
            N +++G   C    DA             D   TF +  + G    + N  T   V+  C
Sbjct: 707  NTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGC 766

Query: 459  CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                      +IH   +K   +    + S+L+  Y   G L+ +    +     ++ +W 
Sbjct: 767  AALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWN 826

Query: 519  AMMSALVHQGHNHEAVTIFHSLVEAGE------KPDEYILGTILNSCAAIGAYQRTKSI- 571
             ++ A    G   EA+ +F  +   G       +P+E     I  +C+  G       + 
Sbjct: 827  VLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLF 886

Query: 572  HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            H      G        + ++D   + G +K A  +      N N V  +++L+ A   H 
Sbjct: 887  HTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQ 946

Query: 631  LVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             V E  EI  K  L  L+P+ A+   +MS   S  GL D+   + K M  + G++  P C
Sbjct: 947  SV-EFGEIAAK-HLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKM-KEMGVRKEPGC 1003



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 8/202 (3%)

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           ER   + W  ++ +  H     +A++ + +++ A   PD +    +L + AA+      K
Sbjct: 291 ERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGK 350

Query: 570 SIHPFVIKLGF--NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            IH  V K G    + V VA+++++ Y KCGD+  AR  FD      D + +N++I    
Sbjct: 351 QIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDD-IPDRDHVSWNSMIATLC 409

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
                  ++ +F  M   N+ P+  T VSV  ACSH   V  G  L K + +        
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSH---VRGGVRLGKQVHAYTLRNGDL 466

Query: 688 DCY--GCLVDMLSRNGYLEDAK 707
             Y    LV M +R G + DAK
Sbjct: 467 RTYTNNALVTMYARLGRVNDAK 488


>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 196/701 (27%), Positives = 355/701 (50%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F  +  RN+ SW  I+   
Sbjct: 49  GQQIHARILKNGDFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLK 108

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG +P+ + V +V K C ++  + FG  +H + +K  +    
Sbjct: 109 CRIGLCEGALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCV 168

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++S M  E
Sbjct: 169 FVASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKE 228

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   ++YA
Sbjct: 229 GIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYA 288

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+RM +KDV++WN L  G+ +         +     L   R + VT S L+    + 
Sbjct: 289 EMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAART 348

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +   F  E  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 349 HNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 408

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + L+ F ++    V  N  T+  ++ +  R+      GQ+  A       
Sbjct: 409 AAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRN------GQVDEA------- 455

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 456 ------------KEMFLQMQSSGIFPN------LISWTTMMNGLVQNGCSEEAINFLRKM 497

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++CA + +    +SIH ++I+ L  ++ V   ++++D YAKCGD
Sbjct: 498 QESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGD 557

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A  AF      +++ +YN +I AYA +G + EA+ ++ +++   ++P   TF S++S
Sbjct: 558 INQAEKAFGSKL-YDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLS 616

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH G + +   +F  M S++GM+P  + YG +VD+L+ +G    A  +I+ MP++P  
Sbjct: 617 ACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELIKEMPYKPDA 676

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL++        EL ++ S++LL   P+N   +V +S
Sbjct: 677 RMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTIS 717



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/634 (24%), Positives = 282/634 (44%), Gaps = 45/634 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG++VK G  + +F+ ++L  MY KCG      +VFD++ ERN+V+W  ++   +Q
Sbjct: 152 GRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVGYVQ 211

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  +++  DM+  G  P    V + +    ++   E G   H  A+   +E +  +
Sbjct: 212 NGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNIL 271

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+LNFY K+G V  AE +F  +   DV  WN +I GY   G   +A+++   M  E +
Sbjct: 272 GTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENL 331

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T    +   +   +  +G+++    IR   E  I + +  +DMY K   +  A K
Sbjct: 332 RYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKK 391

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+   +KD+I WNTL   ++++   G+   LF+   L    PN +T+            
Sbjct: 392 VFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITW------------ 439

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS----YKNITTWNE 418
                                  +S+I    R G V+ A  +F  +     + N+ +W  
Sbjct: 440 -----------------------NSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTT 476

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT- 477
           +++G   N C  + +     + ESG+  N  +    +  C    +      IHG II+  
Sbjct: 477 MMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNL 536

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD-MASWGAMMSALVHQGHNHEAVTI 536
             SS     +SL+  Y   G + N  E + G++  D +  + AM+SA    G+  EA+ +
Sbjct: 537 QHSSSVSFVTSLVDMYAKCGDI-NQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIAL 595

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYA 595
           +  L +   KPD     ++L++C+  G   +  +I    V K G    +     ++D  A
Sbjct: 596 YRRLEDMAIKPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLA 655

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
             G+   A     +     D  +  +L+ A  +    +E ++   K  L +   +   +V
Sbjct: 656 SSGETNKALELIKEMPYKPDARMIQSLV-ASNNKQHKTELVDYLSKQLLESEPENSGNYV 714

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           ++ +A + +G  D+   + + M ++ G++  P C
Sbjct: 715 TISNAFAIEGSWDEVVKMREMMKAK-GLKKKPGC 747



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/511 (25%), Positives = 232/511 (45%), Gaps = 17/511 (3%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL +V  M F  + +    +   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 13  EALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGDFYARNQYIETK 72

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F R+  ++V SW  + G     G  E    G     F + I +
Sbjct: 73  LLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTG-----FVEMIEN 127

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P++     + + CG L     G  +    +  G  D   V SSL  M+ +CG +  A
Sbjct: 128 GVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDA 187

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN L+ GY  N  + + ++   ++ + G+E    T    +      
Sbjct: 188 RKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANI 247

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +   Q H   I  G      + +S++  Y   G ++ +    +     D+ +W  ++
Sbjct: 248 RGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLI 307

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S  V QG   +A+ +   +     + D   L T++++ A     +  K +  + I+  F 
Sbjct: 308 SGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFE 367

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           +E+ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL  EA+ +F  
Sbjct: 368 SEIVLASTAVDMYAKCGSIVDAKKVFDSTV-EKDLILWNTLLAAYADSGLSGEALRLFYD 426

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+L ++ P+  T+ S++ +    G VD+   +F  M S  G+ P+   +  +++ L +NG
Sbjct: 427 MQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSS-GIFPNLISWTTMMNGLVQNG 485

Query: 702 YLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
             E+A + +  M     +P+       LS C
Sbjct: 486 CSEEAINFLRKMQESGLRPNSFSITVALSAC 516



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/444 (20%), Positives = 181/444 (40%), Gaps = 41/444 (9%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N++    G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 235 VTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDR 294

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  D  + M   M+      +   + ++M         + G
Sbjct: 295 MIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLG 354

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++   E    +  + ++ YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 355 KEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADS 414

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 415 GLSGEALRLFYDMQLESVPPNMITW----------------------------------- 439

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N++I   +++  +D A ++F +M       ++ISW T+  G  +N    +  +   K   
Sbjct: 440 NSIILSLLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQE 499

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
           SG RPN  + ++ L  C  L  L+ G  +    + +       +  +SL+ M+ +CG + 
Sbjct: 500 SGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDIN 559

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   F +  Y  +  +N ++S Y       + +  +  + +  ++ +  TF  ++  C 
Sbjct: 560 QAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACS 619

Query: 460 RSEN-QQMVGQIHGAIIKTGFSSC 482
            + +  Q +      + K G   C
Sbjct: 620 HAGDIVQAINIFTEMVSKHGMKPC 643



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 73/295 (24%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D + L+  +S +    +  LG +V  + ++  F ++I L +  + MY+KCG      
Sbjct: 331 LRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAK 390

Query: 100 RVFDEMAER-----------------------------------NLVSWTLIVSAAIQNG 124
           +VFD   E+                                   N+++W  I+ + ++NG
Sbjct: 391 KVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRNG 450

Query: 125 EFDMGLKMYVDMKTNGFMP-----------------------------------NEFAVG 149
           + D   +M++ M+++G  P                                   N F++ 
Sbjct: 451 QVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSIT 510

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSIS 207
             +  C  + +  FG SIH + ++  ++ +  V    S+++ YAK GD+  AE+ F S  
Sbjct: 511 VALSACAHLASLNFGRSIHGYIIR-NLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKL 569

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
            D++  +NAMI  YA  G   EA+ +   +    I  D  TF + L  CS   D 
Sbjct: 570 YDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAGDI 624



 Score = 43.9 bits (102), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS   +L S   G  +HG+I++ L  ++ +    +L+ MY+KCG  
Sbjct: 499 ESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDI 558

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               + F       L  +  ++SA    G     + +Y  ++     P+     S++  C
Sbjct: 559 NQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSAC 618

Query: 156 VSMG 159
              G
Sbjct: 619 SHAG 622


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 192/673 (28%), Positives = 329/673 (48%), Gaps = 1/673 (0%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY + G       +F  +      +W  ++      G+F+  L  Y+ M   G  P+++ 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
              V+K C  + + + G  +H     + ++++ FVG S++  YA+ G ++ A+ +F +I 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             D   WN M+ GY   G    A+ +   M    I  +  TF   L  C+  A  D+G Q
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +HG+ +   +E    + N L+ MY K   +  A K+F+ +   D++SWN +  G+ +N  
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            G+   LF   I +G +P+ +TF+  L    +LL L    ++    +    + +  + S+
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI ++ +C  VEMA       S  +      ++SGY  N  + + L+ F  + +  ++  
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  +           +  ++HG+IIKT      ++ S+++  Y   G+LD +    N
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFN 420

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D   W +M+++    G   EA+ +F  +   G + D   +   L++CA + A   
Sbjct: 421 RITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHY 480

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH  +IK    +++Y  S++ID YAKCG++  +R  FD+    N+V  +N++I AY 
Sbjct: 481 GKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEV-SWNSIISAYG 539

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +HG + E + +F +M    +QP   TF+ ++SAC H G VD+G   +  M  +YG+    
Sbjct: 540 NHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARM 599

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           + Y C+ DM  R G L +A   I  MPF P   V+ +LL  C IHGN EL E AS+ L  
Sbjct: 600 EHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFD 659

Query: 748 LLPKNDAAHVLLS 760
           L P N   +VLL+
Sbjct: 660 LDPLNSGYYVLLA 672



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/632 (24%), Positives = 289/632 (45%), Gaps = 3/632 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LKS  +G  VH  +  +G   D+F+ ++LI +Y++ G+      +FD + +++ V W ++
Sbjct: 71  LKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVM 130

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  ++NG+    +K++++M+ +   PN      V+ VC S    + G  +H  A+   +
Sbjct: 131 LNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGL 190

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  V  ++L  Y+K   + AA ++F ++   D+  WN +I GY   G   EA ++   
Sbjct: 191 ELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRG 250

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  GI  D  TF + L   + +      ++IHG IIR  V   + + +ALID+Y K   
Sbjct: 251 MISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRD 310

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A K   + +  D +   T+  G+  N    +    F   +    +P  VTFS +   
Sbjct: 311 VEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPA 370

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
              L  L+LG +L    +     ++ +V S+++ M+ +CG +++A  VF+ ++ K+   W
Sbjct: 371 FAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICW 430

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++    N    + +  F  +   G   +  +    +  C          +IHG +IK
Sbjct: 431 NSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK 490

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
               S  Y  SSLI  Y   G L+ S    +  +  +  SW +++SA  + G   E + +
Sbjct: 491 GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLAL 550

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           FH ++  G +PD      I+++C   G      +  H    + G    +   + V D + 
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           + G +  A    +      D  V+ TL+ A   HG V E  E+  K  L +L P  + + 
Sbjct: 611 RAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNV-ELAEVASK-HLFDLDPLNSGYY 668

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +++         +  L  +S+  + G++  P
Sbjct: 669 VLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 232/494 (46%), Gaps = 14/494 (2%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ + +  A  LS+  +     LGTQ+HG  V  G   D  + N L+AMYSKC     
Sbjct: 153 SEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQA 212

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             ++FD + + +LVSW  I+S  +QNG       ++  M + G  P+     S +     
Sbjct: 213 ARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNE 272

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + + +    IH + ++  +  + F+  ++++ Y K  DV  A++     SS D      M
Sbjct: 273 LLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTM 332

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY   G   EAL     ++ E +     TF +     + +A  ++G+++HG II++++
Sbjct: 333 ISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKL 392

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           +    + +A++DMY K   +D A +VF R+ +KD I WN++    S+N  PG+  +LF +
Sbjct: 393 DEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQ 452

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             + G+R + V+ S  L  C  L  L  G ++  L +      +    SSLI M+ +CG 
Sbjct: 453 MGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGN 512

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  +  VFD +  KN  +WN ++S Y  +    + L  F  +  +G++ +  TF  ++  
Sbjct: 513 LNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISA 572

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV-------NFGQLDNSFEFSNGAE 510
           C  +      GQ+   I      +  Y   + ++ Y          G+L  +FE  N   
Sbjct: 573 CGHA------GQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMP 626

Query: 511 -RLDMASWGAMMSA 523
              D   WG ++ A
Sbjct: 627 FPPDAGVWGTLLGA 640


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 199/701 (28%), Positives = 353/701 (50%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC  F     +F ++  RN+ SW  I+   
Sbjct: 87  GKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVK 146

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  N   P+ F V +V K C ++  S FG  +H + +K  +    
Sbjct: 147 CRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCV 206

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++S M  E
Sbjct: 207 FVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKE 266

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  + ++ Y K   ++YA
Sbjct: 267 GIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYA 326

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+RM +KDV++WN L  G+ +         +     L   + + VT S L+    + 
Sbjct: 327 EMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAART 386

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +   F  +  + S+ + M+  CG++  A  VFD+V  K++  WN LL
Sbjct: 387 QNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLL 446

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S Y  +    +  + F  +    V  N  T+  ++ +  R+      GQ++ A  K  FS
Sbjct: 447 SVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRN------GQVNEA--KEIFS 498

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                            Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 499 -----------------QMQSSGIFPN------LVSWTTMMNGLVQNGCSEEAILFLRKM 535

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++C+ + +    +S+H ++I+    ++ V + ++++D YAKCGD
Sbjct: 536 QESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGD 595

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A M F     S D+ +YN +I AYA +G V EA+ +  +++   ++P   TF S++S
Sbjct: 596 INKAEMVFRSKLCS-DLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLS 654

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+H G V +   +F  M S++G++P  + YG +VD+L+  G  + A  +IE MP++   
Sbjct: 655 ACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKSDA 714

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL++ C +    EL ++ S  LL   P+N   +V +S
Sbjct: 715 RMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVTIS 755



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 233/516 (45%), Gaps = 27/516 (5%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL++++ M F  + +    +   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 51  EALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETK 110

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K    + +  +F ++  ++V SW  + G     G  E    G     F + + +
Sbjct: 111 LVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMG-----FVEMLQN 165

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              P++     + + CG L     G  +    +  G  D   V SSL  M+ +CG ++ A
Sbjct: 166 EIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDA 225

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN L+ GY  N  + + ++   ++ + G+E    T      + C S
Sbjct: 226 RKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTV-----STCLS 280

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  M G     Q H   I  G      + +S +  Y   G ++ +    +     D+ +
Sbjct: 281 ASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRMIEKDVVT 340

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG   +A+ +   +     K D   L T++++ A     +  K +  + I
Sbjct: 341 WNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCI 400

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  F +++ +AS  +D YA CG I  A+  FD S  + D+I++NTL+  YA  GL  EA 
Sbjct: 401 RHSFASDIVLASTAVDMYANCGSIIDAKKVFD-SVLAKDLILWNTLLSVYAESGLSGEAF 459

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   +  +++ 
Sbjct: 460 RLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSS-GIFPNLVSWTTMMNG 518

Query: 697 LSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
           L +NG  E+A   +  M     +P+       LS C
Sbjct: 519 LVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 554



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/538 (19%), Positives = 213/538 (39%), Gaps = 63/538 (11%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  + +  Y K G   +   +FD 
Sbjct: 273 VTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDR 332

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  +  + M   M+      +   + ++M         + G
Sbjct: 333 MIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLG 392

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++     +  +  + ++ YA  G +  A++VF S+ + D+  WN ++  YA  
Sbjct: 393 KEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAES 452

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EA  +   M  E +  +  T+                                   
Sbjct: 453 GLSGEAFRLFYEMQLESVPPNAITW----------------------------------- 477

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I  ++++  ++ A ++F +M       +++SW T+  G  +N    +      K   
Sbjct: 478 NLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQE 537

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-------VTSSLIYMFC 393
           SG RPN  + ++ L  C  L  L  G  +       G++           + +SL+ M+ 
Sbjct: 538 SGLRPNAFSITVALSACSNLASLHFGRSVH------GYIIRNQQHSSSVLIETSLVDMYA 591

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG +  A  VF +    ++  +N ++S Y  N    + +     + ++G++ +  TF  
Sbjct: 592 KCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTS 651

Query: 454 VVETCCRSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           ++  C  + +  Q V      + K G   C      ++    + G+ D +       E +
Sbjct: 652 LLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRL---IEEM 708

Query: 513 DMASWGAMMSALV---HQGHNHEAVTIF--HSLVEAGEKPDEYILGTILNSCAAIGAY 565
              S   M+ +LV   +  H  E +     H L    E    Y+  TI N+ A  G++
Sbjct: 709 PYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYV--TISNAYAVEGSW 764



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/343 (20%), Positives = 139/343 (40%), Gaps = 72/343 (20%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF---- 95
           L+ D + L+  +S +   ++  LG +V  + ++  F +DI L +  + MY+ CG      
Sbjct: 369 LKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAK 428

Query: 96  ---------------------------GWGLRVFDEM----AERNLVSWTLIVSAAIQNG 124
                                      G   R+F EM       N ++W LI+ + ++NG
Sbjct: 429 KVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNG 488

Query: 125 EFDMGLKMYVDMKTNGFMP-----------------------------------NEFAVG 149
           + +   +++  M+++G  P                                   N F++ 
Sbjct: 489 QVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSIT 548

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVFYSISS 208
             +  C ++ +  FG S+H + ++ +   +   +  S+++ YAK GD+  AE VF S   
Sbjct: 549 VALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLC 608

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            D+  +NAMI  YA  G   EA+ +   +   GI  D  TF + L  C+   D     +I
Sbjct: 609 SDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEI 668

Query: 269 -HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
              ++ +  ++  +     ++D+   +   D A ++ E M  K
Sbjct: 669 FTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYK 711



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS   NL S   G  VHG+I++    ++ + ++ +L+ MY+KCG  
Sbjct: 537 ESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDI 596

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VF      +L  +  ++SA   NG     + +   ++  G  P+     S++  C
Sbjct: 597 NKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSAC 656

Query: 156 VSMG 159
              G
Sbjct: 657 NHAG 660


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 184/621 (29%), Positives = 316/621 (50%), Gaps = 1/621 (0%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P+++    V+K C  +     G  I    L++  + + FV  S++  YA  G +  A
Sbjct: 5   GVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDA 64

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            R F  +   D   WN MI GY  CG    A+ +   M+      D  TF   L      
Sbjct: 65  RRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSE 124

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           A  + GRQ+HGL++RS ++    + N L+ +Y K   +  A K+F+ M   D++ WN + 
Sbjct: 125 AMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMI 184

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
           GG+ +N      + LF++ I +G +P+ +TF+  L    +   L    ++    +  G +
Sbjct: 185 GGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVI 244

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  + S+LI ++ +C    MA  +F+  +  +I  +  ++SGY  N  + D L+ F  +
Sbjct: 245 LDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWL 304

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            +  +  N  TF  ++  C      ++  ++HG IIK        + S+++  Y   G+L
Sbjct: 305 LQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRL 364

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D +          D   W +++++    G   EA+ +F  +   G K D   +   L++C
Sbjct: 365 DLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSAC 424

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A I A    K IH F+IK  F ++++  SA+I+ YAKCG +  AR+ F+     N+V  +
Sbjct: 425 ANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEV-AW 483

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           N++I AY +HG +++++ +F  M    +QP   TF++++S+C H G V+ G   F+ M  
Sbjct: 484 NSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTE 543

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           +YG+    + Y C+ D+  R G+L++A  VI  MPF P+ +V+ +LL  CR+HGN EL E
Sbjct: 544 EYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAE 603

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
            AS  LL L PKN   ++LL+
Sbjct: 604 VASRYLLDLEPKNSGYYLLLT 624



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/668 (24%), Positives = 309/668 (46%), Gaps = 22/668 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  +   I+++GF  D+F+ ++LI +Y+  G      R FD+M +++ V W ++++  +
Sbjct: 28  LGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYV 87

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q GE D  +K++ DM ++   P+      V+ +  S    E+G  +H   ++  ++  P 
Sbjct: 88  QCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPL 147

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++  Y+K   +  A ++F  +   D+  WN MIGGY   G+  +A  + + M+  G
Sbjct: 148 VGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAG 207

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  TF + L   +  +     ++IHG I+R  V   + + +ALID+Y K      A 
Sbjct: 208 IKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMAC 267

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F      D++ +  +  G+  N        +F   +     PN +TFS +L  C  L 
Sbjct: 268 KMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLA 327

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + LG +L    +     ++  V S+++ M+ +CG +++AH +F  +S K+   WN +++
Sbjct: 328 AIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIIT 387

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  +    + +  F  +   GV+ +  T    +  C          +IHG +IK  F S
Sbjct: 388 SFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFES 447

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +  S+LI  Y   G+L+ +    N  +  +  +W ++++A  + G+  +++ +FH+++
Sbjct: 448 DLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNML 507

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E G +PD     TIL+SC   G  Q    +  F       TE Y   A ++ YA   D+ 
Sbjct: 508 EEGIQPDHITFLTILSSCGHAG--QVEDGVRYFRCM----TEEYGIPAQMEHYACMADLF 561

Query: 602 GARMAFDQSFN-------SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           G     D++F             V+ TL+ A   HG V E  E+  +  L +L+P  + +
Sbjct: 562 GRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNV-ELAEVASRY-LLDLEPKNSGY 619

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
             +++         +     + +  + G+Q  P C    V+  +   +  D  H      
Sbjct: 620 YLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVNNTTCVFFAADGSH------ 673

Query: 715 FQPSPTVY 722
              SP +Y
Sbjct: 674 -PESPQIY 680



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 243/520 (46%), Gaps = 14/520 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D +  A  LS+S +      G Q+HG +V+ G      + N L+ +YSK    G   +
Sbjct: 108 KPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARK 167

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD M + +LV W  ++   +QNG  D    ++ +M + G  P+     S +       +
Sbjct: 168 LFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSS 227

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +    IH + ++  +  + ++  ++++ Y K  D   A ++F   +  D+  + AMI G
Sbjct: 228 LKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISG 287

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G   +AL +   +L + +  +  TF + L  C+ +A   +GR++HG II++E+E  
Sbjct: 288 YVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEK 347

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + +A+++MY K   +D A  +F R++ KD I WN++   FS++  P +   LF +  +
Sbjct: 348 CPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGM 407

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G + + VT S  L  C  +  L  G ++    +   F  +    S+LI M+ +CG + +
Sbjct: 408 EGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNI 467

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF+ +  KN   WN +++ Y ++   AD L  F N+ E G++ +  TF  ++ +C  
Sbjct: 468 ARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGH 527

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV-------NFGQLDNSFEFSNGAERLD 513
           +      GQ+   +      +  Y   + ++ Y          G LD +FE         
Sbjct: 528 A------GQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPP 581

Query: 514 MAS-WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
            AS WG ++ A    G+   A      L++   K   Y L
Sbjct: 582 AASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYL 621



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 248/504 (49%), Gaps = 17/504 (3%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML  G+  DKYTF   ++ C+ + +  +G+ I  +I+    +  + + ++LI +Y  +  
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR- 355
           ++ A + F++M DKD + WN +  G+ +         LF   + S ++P+ VTF+ +L  
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C + + ++ G QL  L +  G      V ++L+ ++ +   +  A  +FD +   ++  
Sbjct: 121 SCSEAM-VEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVV 179

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ GY  N    D    F  +  +G++ +  TF   + +   S + + + +IHG I+
Sbjct: 180 WNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIV 239

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + G     Y+ S+LI  Y        + +  N + + D+  + AM+S  V  G N +A+ 
Sbjct: 240 RHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALE 299

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           IF  L++    P+     +IL +CA + A +  + +H ++IK     +  V SA+++ YA
Sbjct: 300 IFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYA 359

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG +  A + F +  +  D I +N++I +++  G   EA+ +F +M +  ++    T  
Sbjct: 360 KCGRLDLAHLIFGR-ISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVS 418

Query: 656 SVMSACS-----HKGLVDKGCLLFKSMDSQ-YGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           + +SAC+     H G    G ++  + +S  + M         L++M ++ G L  A+ V
Sbjct: 419 AALSACANIPALHYGKEIHGFMIKGAFESDLFDMS-------ALINMYAKCGKLNIARLV 471

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHG 733
             +M  + +   + S+++    HG
Sbjct: 472 FNLMQ-EKNEVAWNSIIAAYGYHG 494



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 65/125 (52%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + ++ +LS   N+ +   G ++HG ++K  F +D+F  + LI MY+KCG      
Sbjct: 410 VKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIAR 469

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ M E+N V+W  I++A   +G     L ++ +M   G  P+     +++  C   G
Sbjct: 470 LVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAG 529

Query: 160 ASEFG 164
             E G
Sbjct: 530 QVEDG 534


>gi|297817172|ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322307|gb|EFH52728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 196/685 (28%), Positives = 341/685 (49%), Gaps = 43/685 (6%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +++ NN+I +Y K G      +VFD+M ERN VS+  I++   + G+ +    +  +M+ 
Sbjct: 49  VYISNNIICLYEKLGEVSLAGKVFDQMPERNKVSFNTIINGYSKYGDAEKAWGVLSEMRY 108

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVA 197
            G++PN+  V  ++  C S+     G  +H  +LK  +   + +VG  +L FY +L  + 
Sbjct: 109 FGYLPNQSTVSGLLS-CASLDIRA-GTQLHGLSLKYGLFMADAYVGTCLLCFYGRLELLE 166

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            AE+VF  +    +  WN M+    H G+  E + +   ++  G  + + + +  L+G S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHHGFLKECMFLFRELVGMGACLTESSLLGVLKGVS 226

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
              D +I +Q+H    +  ++C IS+VN+LI  Y K      A ++F+     D++SWN 
Sbjct: 227 CENDLEISKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNA 286

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           + G  ++++NP +T  LF      G  PN  T+  +L        L  G Q+  + +  G
Sbjct: 287 IIGATAKSENPLKTLKLFVSMPEHGFSPNQGTYISVLGASSLRQLLSFGRQIHGMLIKNG 346

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +  + ++LI  + +CG++E +H  FD +  KNI  WN LLSGY  N      L  F 
Sbjct: 347 CKTDIFLGNALIDFYAKCGSLEDSHLCFDYIRDKNIVCWNALLSGYS-NKDGPICLSLFL 405

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-- 495
            + + G      TF   +++CC +E QQ+    H  I++ G+    Y+ SSL++SY    
Sbjct: 406 QMLQMGFRPTEYTFSTTLKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQ 461

Query: 496 ------------------------------FGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                                          GQ   S +  +  E+ D  SW   ++A  
Sbjct: 462 LMSDALFLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEV 584
              ++ E + +F  ++++  +PD Y   +IL+ C+ +       SIH  + K  F+  + 
Sbjct: 522 RSDNHGEVIDLFKHMLQSNIRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDT 581

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V + +ID Y KCG I+     F+++   N +I +  LI +   +G   EA+E F +   
Sbjct: 582 FVCNVLIDMYGKCGSIRSVIKVFEETREKN-LITWTALISSLGIYGYGHEALEKFKETLS 640

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
              +P + +F+S+++AC H G+V +G  LF+ M   YG++P  D Y C VD+L+RNGYL+
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMDLFQKM-KDYGIEPEMDHYRCAVDLLARNGYLK 699

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGC 729
           +A+H+I  MPF     V+R+ L GC
Sbjct: 700 EAEHLIHRMPFPADAPVWRTFLDGC 724



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 263/595 (44%), Gaps = 39/595 (6%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           GTQ+HG  +K G F  D ++   L+  Y +        +VF++M  ++L +W  ++S   
Sbjct: 132 GTQLHGLSLKYGLFMADAYVGTCLLCFYGRLELLEMAEQVFEDMPFKSLETWNHMMSLLG 191

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +G     + ++ ++   G    E ++  V+K        E    +HC A K  ++    
Sbjct: 192 HHGFLKECMFLFRELVGMGACLTESSLLGVLKGVSCENDLEISKQLHCSATKQGLDCEIS 251

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y K G+   AER+F    S D+  WNA+IG  A      + L +  SM   G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNAIIGATAKSENPLKTLKLFVSMPEHG 311

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + ++ T+I+ L   SL      GRQIHG++I++  +  I + NALID Y K   ++ + 
Sbjct: 312 FSPNQGTYISVLGASSLRQLLSFGRQIHGMLIKNGCKTDIFLGNALIDFYAKCGSLEDSH 371

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + DK+++ WN L  G+S NK+     SLF + +  G RP   TFS  L+ C  + 
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYS-NKDGPICLSLFLQMLQMGFRPTEYTFSTTLKSCC-VT 429

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIY------------------------------- 390
           +L    QL  + +  G+ D + V SSL+                                
Sbjct: 430 ELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMSDALFLLDWASGPTSVVPLNIVA 486

Query: 391 -MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            ++ R G    +  +   +   +  +WN  ++    +    +V+  F ++ +S +  +  
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDNHGEVIDLFKHMLQSNIRPDNY 546

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
           TF  ++  C +  +  +   IHG I KT FS    ++C+ LI  Y   G + +  +    
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVLIDMYGKCGSIRSVIKVFEE 606

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               ++ +W A++S+L   G+ HEA+  F   +  G KPD     +IL +C   G  +  
Sbjct: 607 TREKNLITWTALISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             +   +   G   E+      +D  A+ G +K A     +     D  V+ T +
Sbjct: 667 MDLFQKMKDYGIEPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAPVWRTFL 721



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 225/539 (41%), Gaps = 72/539 (13%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +  Q+H    K G   +I + N+LI+ Y KCG      R+F E    ++VSW  I+ A  
Sbjct: 233 ISKQLHCSATKQGLDCEISVVNSLISAYGKCGNTHMAERMFQEAGSWDIVSWNAIIGATA 292

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      LK++V M  +GF PN+    SV+          FG  IH   +K   + + F
Sbjct: 293 KSENPLKTLKLFVSMPEHGFSPNQGTYISVLGASSLRQLLSFGRQIHGMLIKNGCKTDIF 352

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++FYAK G +  +   F  I   ++ CWNA++ GY++   G   L++   ML  G
Sbjct: 353 LGNALIDFYAKCGSLEDSHLCFDYIRDKNIVCWNALLSGYSN-KDGPICLSLFLQMLQMG 411

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM---- 297
               +YTF   L+ C +       +Q+H +I+R   E +  ++++L+  Y K+  M    
Sbjct: 412 FRPTEYTFSTTLKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMSDAL 467

Query: 298 ---DYA-------------------------FKVFERMADKDVISWNTLFGGFSENKNPG 329
              D+A                          K+   +   D +SWN      S + N G
Sbjct: 468 FLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDNHG 527

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSL 388
           +   LF   + S  RP++ TF  +L  C KL DL LG  +  L     F   +  V + L
Sbjct: 528 EVIDLFKHMLQSNIRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVL 587

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +CG++     VF+    KN+ TW  L+S         + L+ F      G + + 
Sbjct: 588 IDMYGKCGSIRSVIKVFEETREKNLITWTALISSLGIYGYGHEALEKFKETLSLGFKPDR 647

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            +F  ++ T CR          HG ++K G          L +   ++G           
Sbjct: 648 VSFISIL-TACR----------HGGMVKEGM--------DLFQKMKDYGI---------- 678

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
               +M  +   +  L   G+  EA  + H +    + P   +  T L+ C      QR
Sbjct: 679 --EPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAP---VWRTFLDGCNRFAEEQR 732



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 4/186 (2%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFG 96
           S +R D       LSL   L    LG+ +HG I K  F+  D F+ N LI MY KCG   
Sbjct: 539 SNIRPDNYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCVDTFVCNVLIDMYGKCGSIR 598

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             ++VF+E  E+NL++WT ++S+    G     L+ + +  + GF P+  +  S++  C 
Sbjct: 599 SVIKVFEETREKNLITWTALISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILTACR 658

Query: 157 SMGASEFGYSIHCFALKIRIEKN-PFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
             G  + G  +        IE       C+V +  A+ G +  AE + + +    D   W
Sbjct: 659 HGGMVKEGMDLFQKMKDYGIEPEMDHYRCAV-DLLARNGYLKEAEHLIHRMPFPADAPVW 717

Query: 215 NAMIGG 220
              + G
Sbjct: 718 RTFLDG 723



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 7/172 (4%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           L ++LN C    ++ RTK++H   I L       VY+++ +I  Y K G++  A   FDQ
Sbjct: 15  LVSLLNVCRKAPSFARTKALHALSITLCSVILQPVYISNNIICLYEKLGEVSLAGKVFDQ 74

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
               N V  +NT+I  Y+ +G   +A  +  +M+     P+Q+T   ++S  S   L  +
Sbjct: 75  MPERNKV-SFNTIINGYSKYGDAEKAWGVLSEMRYFGYLPNQSTVSGLLSCAS---LDIR 130

Query: 670 GCLLFKSMDSQYGMQPSPDCYG-CLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
                  +  +YG+  +    G CL+    R   LE A+ V E MPF+   T
Sbjct: 131 AGTQLHGLSLKYGLFMADAYVGTCLLCFYGRLELLEMAEQVFEDMPFKSLET 182


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 202/716 (28%), Positives = 368/716 (51%), Gaps = 8/716 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHI-VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           L L    K+  +G ++H  I     F ND+ L   L+ MYS C        VF+    +N
Sbjct: 100 LQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKN 159

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           L  W  ++S  ++N  F   + ++V+M +   F+P+ F +  V+K CV +     G ++H
Sbjct: 160 LFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVH 219

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
            FALK ++  + FVG +++  Y K G V +A +VF  +   ++  WN+++      G   
Sbjct: 220 GFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFE 279

Query: 229 EALNVVSSMLF--EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           E+  +   +L   EG+  D  T +  +  C+   +  +G   HGL ++  +   + + ++
Sbjct: 280 ESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSS 339

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RP 345
           L+DMY K   +  A  +F+   +K+VISWN++ GG+S++++      L  K  +    + 
Sbjct: 340 LLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKV 398

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAHSV 404
           N VT   +L  C + +      ++   AL  GF+  +E V ++ +  + +CG++  A  V
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +  K +++WN L+ G+  N      L  +  +  SG+E +  T   ++  C R ++ 
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               +IHG++++ GF    +IC SL+  YV  G++  +  F +  E  ++  W  M++  
Sbjct: 519 SCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGF 578

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                  +A+ +FH ++ +   PDE  +   L +C+ + A +  K +H F +K       
Sbjct: 579 SQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHS 638

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V  ++ID YAKCG ++ ++  FD+     +V  +N LI  Y  HG   +A+E+F  M+ 
Sbjct: 639 FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEV-TWNVLITGYGIHGHGRKAIELFKSMQN 697

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           A  +P   TF+++++AC+H GLV +G      M S +G++P  + Y C+VDML R G L 
Sbjct: 698 AGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLN 757

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A  ++  +P +P   ++ SLLS CR + + ++GE  + KLL L P     +VL+S
Sbjct: 758 EALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLIS 813



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/531 (26%), Positives = 260/531 (48%), Gaps = 16/531 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG   HG  +KLG   ++ + ++L+ MYSKCGY      +FD   E+N++SW  ++    
Sbjct: 317 LGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYS 375

Query: 122 QNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKN 179
           ++ +F    ++   M+  +    NE  + +V+ VC           IH +AL+   I+ +
Sbjct: 376 KDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSD 435

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  + +  YAK G +  AE VF  + S  V  WNA+IGG+   G+  +AL++   M  
Sbjct: 436 ELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRG 495

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  D +T  + L  C+ +     G++IHG ++R+  E    I  +L+ +Y++   +  
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILL 555

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+ M +K+++ WNT+  GFS+N+ P     +FH+ + S   P+ ++    L  C +
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQ 615

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           +  L LG +L C A+     +   VT SLI M+ +CG +E + ++FD V  K   TWN L
Sbjct: 616 VSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVL 675

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQIHGAI- 474
           ++GY  +      ++ F ++  +G   +  TF  ++  C      +E  + +GQ+     
Sbjct: 676 ITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFG 735

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSALVHQGHNHEA 533
           IK        +   L ++    G+L+ + E  N   ++ D   W +++S+  +       
Sbjct: 736 IKPKLEHYACVVDMLGRA----GRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIG 791

Query: 534 VTIFHSLVEAG-EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
             + + L+E G +K + Y+L  I N  A +G +   + +   + ++G   +
Sbjct: 792 EKVANKLLELGPDKAENYVL--ISNFYARLGKWDEVRKMRQRMKEIGLQKD 840



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 12/289 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  D   +A  LS    LKS   G ++HG +++ GF  D F+  +L+++Y +CG    
Sbjct: 496 SGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILL 555

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               FD M E+NLV W  +++   QN EF    L M+  M ++   P+E ++   +  C 
Sbjct: 556 AKLFFDNMEEKNLVCWNTMINGFSQN-EFPFDALDMFHQMLSSKIWPDEISIIGALGACS 614

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            + A   G  +HCFA+K  + ++ FV CS+++ YAK G +  ++ +F  +       WN 
Sbjct: 615 QVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNV 674

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD-FDIGRQIHGLI 272
           +I GY   G+G +A+ +  SM   G   D  TFI  L  C+   LVA+  +   Q+  L 
Sbjct: 675 LITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLF 734

Query: 273 -IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF 319
            I+ ++E    +V    DM  ++  ++ A ++   + DK D   W++L 
Sbjct: 735 GIKPKLEHYACVV----DMLGRAGRLNEALELVNELPDKPDSRIWSSLL 779


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 342/700 (48%), Gaps = 11/700 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV---FDEMAERNLVSWTLIVSAAI 121
           QVH H++K G   D+F+  +L+  Y   G FGW   V   F E+ E N+VSWT ++    
Sbjct: 80  QVHAHVIKCGLACDVFVGTSLLHFY---GTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYA 136

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG     + +Y  ++ +G   NE A+ +V++ C  +     GY +    +K  ++    
Sbjct: 137 YNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVS 196

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ +     +  A  VF  +   D   WN++I    H G+  ++L   S M +  
Sbjct: 197 VANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTH 256

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T    L  C    +   GR +HG++++S +E ++ + N+L+ MY ++   + A 
Sbjct: 257 AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAE 316

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF +M ++D+ISWN++     +N N  +   L  + + +    N+VTF+  L  C  L 
Sbjct: 317 FVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLE 376

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L +   +    +  G      + ++L+ M+ + G++  A  V   +  ++  TWN L+ 
Sbjct: 377 TLKI---VHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIG 433

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFS 480
           G+  N      ++ F  + E GV VN  T   ++      ++    G  IH  I+  GF 
Sbjct: 434 GHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFE 493

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ SSLI  Y   G L+ S    +     + ++W A++SA  H G   EA+ +   +
Sbjct: 494 LETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKM 553

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G   D++           +      + +H  +IK GF +  YV +A +D Y KCG+I
Sbjct: 554 RNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEI 613

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
                   Q   S     +N LI A A HG   +A E F +M    L+P   TFVS++SA
Sbjct: 614 DDVFRILPQP-RSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSA 672

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLVD+G   F SM +++G+    +   C++D+L R G L +A++ I  MP  P+  
Sbjct: 673 CSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDL 732

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+RSLL+ C+IHGN EL   A+++L  L   +D+A+VL S
Sbjct: 733 VWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYS 772



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 170/654 (25%), Positives = 309/654 (47%), Gaps = 20/654 (3%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MYSK G       VFD+M ERN  SW  ++S  ++ G +   ++ +  M  +G  P+ + 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60

Query: 148 VGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
             S++  C   G  +E  + +H   +K  +  + FVG S+L+FY   G VA  + VF  I
Sbjct: 61  AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              ++  W +++ GYA+ G   E ++V   +  +G+  ++      ++ C ++ D  +G 
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+ G +I+S ++ ++S+ N+LI M+     ++ A  VF+ M ++D ISWN++      N 
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +  ++   F +   + ++ +++T S LL  CG   +L  G  L  + +  G      V +
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           SL+ M+ + G  E A  VF  +  +++ +WN +++ +  N      L+    + ++    
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  TF   +  C   E  ++V   H  +I  G      I ++L+  Y  FG +  +    
Sbjct: 361 NYVTFTTALSACYNLETLKIV---HAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-- 564
                 D  +W A++         + A+  F+ L E G  P  YI  TI+N  +A  +  
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG-VPVNYI--TIVNLLSAFLSPD 474

Query: 565 --YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                   IH  ++  GF  E +V S++I  YA+CGD+  +   FD   N N    +N +
Sbjct: 475 DLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSS-TWNAI 533

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           + A AH+G   EA+++  KM+   +   Q +F    +   +  L+D+G  L  S+  ++G
Sbjct: 534 LSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQL-HSLIIKHG 592

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS---LLSGCRIHG 733
            + +       +DM  + G ++D   V  I+P QP     RS   L+S    HG
Sbjct: 593 FESNDYVLNATMDMYGKCGEIDD---VFRILP-QPRSRSQRSWNILISALARHG 642



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 162/610 (26%), Positives = 280/610 (45%), Gaps = 10/610 (1%)

Query: 40  LRKDPIF-----LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           LR+D ++     +A  +     L  ++LG QV G ++K G    + + N+LI+M+  C  
Sbjct: 151 LRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDS 210

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                 VFD+M ER+ +SW  I++A++ NG  +  L+ +  M+      +   + +++ V
Sbjct: 211 IEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPV 270

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C S     +G  +H   +K  +E N  V  S+L+ Y++ G    AE VF+ +   D+  W
Sbjct: 271 CGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISW 330

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N+M+  +   G    AL ++  ML      +  TF  AL  C  +    I   +H  +I 
Sbjct: 331 NSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VHAFVIL 387

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +  ++ I NAL+ MY K   M  A +V + M D+D ++WN L GG ++NK P      
Sbjct: 388 LGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEA 447

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           F+     G   N++T   LL       D LD G+ +    +  GF  E  V SSLI M+ 
Sbjct: 448 FNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYA 507

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG +  ++ +FD ++ KN +TWN +LS         + LK    +   G+ ++  +F  
Sbjct: 508 QCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSV 567

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
                          Q+H  IIK GF S  Y+ ++ +  Y   G++D+ F          
Sbjct: 568 AHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRS 627

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IH 572
             SW  ++SAL   G   +A   FH +++ G +PD     ++L++C+  G      +   
Sbjct: 628 QRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFS 687

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
               K G  T +     +ID   + G +  A    ++       +V+ +L+ A   HG +
Sbjct: 688 SMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGNL 747

Query: 633 SEAMEIFDKM 642
             A +  D++
Sbjct: 748 ELARKAADRL 757


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 197/722 (27%), Positives = 371/722 (51%), Gaps = 8/722 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R    F++++LS S NL       ++H  ++ LG     F    LI  YS        L 
Sbjct: 4   RVSSAFISRALSSSSNLNEL---RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLS 60

Query: 101 VFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           VF  ++  +N+  W  I+ A  +NG F   L+ Y  ++ +   P+++   SV+K C  + 
Sbjct: 61  VFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLF 120

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            +E G  ++   L++  E + +VG ++++ Y+++G ++ A +VF  +   D+  WN++I 
Sbjct: 121 DAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLIS 180

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY+  GY  EAL +   +    I  D +T  + L   + +     G+ +HG  ++S V  
Sbjct: 181 GYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVN- 239

Query: 280 SISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
           S+S+V N L+ MY+K S    A +VF+ M  +D +++NT+  G+ + +   ++  +F + 
Sbjct: 240 SVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLEN 299

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
            L   +P+ +T + +L  CG L DL L   +    L  GF+ E  V + LI ++ +CG +
Sbjct: 300 -LDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDM 358

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  VF+++  K+  +WN ++SGY  +    + +K F  +     + +  T+  ++   
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
            R  + +    +H   IK+G      + ++LI  Y   G++ +S +  N    LD  +W 
Sbjct: 419 TRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWN 478

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++SA V  G     + +   + +    PD       L  CA++ A +  K IH  +++ 
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRF 538

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G+ +E+ + +A+I+ Y+KCG ++ +   F++  +  DV+ +  +I AY  +G   +A+E 
Sbjct: 539 GYESELQIGNALIEMYSKCGCLESSFRVFER-MSRRDVVTWTGMIYAYGMYGEGEKALES 597

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F  M+ + + P    F++++ ACSH GLV+KG   F+ M + Y + P  + Y C+VD+LS
Sbjct: 598 FVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLS 657

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R+  +  A+  I+ MP +P  +++ S+L  CR  G+ E  E  S +++ L P +    +L
Sbjct: 658 RSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717

Query: 759 LS 760
            S
Sbjct: 718 AS 719



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 242/556 (43%), Gaps = 34/556 (6%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S++  D   ++  L    NL     G  +HG  +K G  +   + N L+AMY K     
Sbjct: 200 NSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPT 259

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              RVFDEM  R+ V++  ++   ++    +  +KM+++   + F P+   V SV+  C 
Sbjct: 260 DARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACG 318

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +        I+ + L+        V   +++ YAK GD+  A  VF S+   D   WN+
Sbjct: 319 HLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I GY   G   EA+ +   M+      D  T++  +   + +AD   G+ +H   I+S 
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSG 438

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTAS 333
           +   +S+ NALIDMY K   +  + K+F  M   D ++WNT+      F +     Q  +
Sbjct: 439 IYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTT 498

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
              K   +   P+  TF + L  C  L    LG ++ C  L  G+  E  + ++LI M+ 
Sbjct: 499 QMRK---NKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG +E +  VF+ +S +++ TW  ++  Y         L++F ++ +SG+  +   F  
Sbjct: 556 KCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIA 615

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFS-----SCGYICSSLIKSYVNFGQLDNSFEFSNG 508
           ++  C            H  +++ G +        Y    +I+ Y     L +  +  + 
Sbjct: 616 LIYACS-----------HSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664

Query: 509 AERL--------DMASWGAMMSALVHQGHNHEAVTIFHSLVEAG-EKPDEYILGTILNSC 559
           AE          D + W +++ A    G    A  +   ++E   + P   IL +  N+ 
Sbjct: 665 AEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS--NAY 722

Query: 560 AAIGAYQRTKSIHPFV 575
           AA+  + +   I   V
Sbjct: 723 AALRKWDKVSLIRKSV 738


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 198/703 (28%), Positives = 352/703 (50%), Gaps = 37/703 (5%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 81  GQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVK 140

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H +  K  +    
Sbjct: 141 CRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCV 200

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++S M  E
Sbjct: 201 FVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKE 260

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   +DYA
Sbjct: 261 GVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYA 320

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+RM +KDV++WN L  G+           +     L   + + VT S L+    + 
Sbjct: 321 EMIFDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAART 380

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +   F  +  + S+ + M+ +CG+V  A  VFD+   K++  WN LL
Sbjct: 381 QNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLL 440

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + L+ F  +    V  N  T+  ++ +  R+      GQ++ A       
Sbjct: 441 AAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN------GQVNEA------- 487

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      M SW  MM+ LV  G + EA+     +
Sbjct: 488 ------------KEMFLQMQSSGTFPN------MISWTTMMNGLVQNGCSEEAILFLRKM 529

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++C  + +    +SIH ++I+    ++   + ++++D YAKCGD
Sbjct: 530 QESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGD 589

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVM 658
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++    ++P   T  +V+
Sbjct: 590 INKAERVFGSKLYS-ELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVL 648

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC+H G +++   +F  M S++GM+P  + YG +VD+L+  G  E A  +IE MP++P 
Sbjct: 649 SACNHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYKPD 708

Query: 719 PTVYRSLLSGCRIHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
             + +SL++ C+   +K EL ++ S +LL   P+N   +V +S
Sbjct: 709 ARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVS 751



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 228/490 (46%), Gaps = 24/490 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL++V+ M F  + +    F   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 45  EALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARILKNGDFYARNEYIETK 104

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F + + +
Sbjct: 105 LVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMG-----FVEMLEN 159

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P++     + + CG L     G  +       G  D   V SSL  M+ +CG ++ A
Sbjct: 160 GIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDA 219

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN L+ GY  N  + + ++   ++ + GVE    T      + C S
Sbjct: 220 RKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTV-----STCLS 274

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  M G     Q H   I  G      + +S++  Y   G +D +    +     D+ +
Sbjct: 275 ASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVT 334

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  VHQG    A+ +   +     K D   L T++++ A     +  K +  + I
Sbjct: 335 WNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCI 394

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  F +++ +AS  +D YAKCG +  A+  FD +    D+I++NTL+ AYA  GL  EA+
Sbjct: 395 RHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQ-KDLILWNTLLAAYAESGLSGEAL 453

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G  P+   +  +++ 
Sbjct: 454 RLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GTFPNMISWTTMMNG 512

Query: 697 LSRNGYLEDA 706
           L +NG  E+A
Sbjct: 513 LVQNGCSEEA 522



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 135/624 (21%), Positives = 265/624 (42%), Gaps = 43/624 (6%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR- 175
           VS+  +NGE    L +  +M            G +++ CV       G  IH   LK   
Sbjct: 34  VSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARILKNGD 93

Query: 176 -IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
              +N ++   ++ FYAK   +  AE +F  +   +V  W A+IG     G    AL   
Sbjct: 94  FYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGF 153

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  GI  D +   N  + C  +     GR +HG + ++ +   + + ++L DMY K 
Sbjct: 154 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKC 213

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ + +++V++WN L  G+ +N    +   L       G  P  VT S  L
Sbjct: 214 GVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCL 273

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  ++ G Q   +A+  G   +  + +S++  +C+ G ++ A  +FD +  K++ 
Sbjct: 274 SASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVV 333

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
           TWN L+SGY       + +   C +     ++ +  T   ++    R++N ++  ++   
Sbjct: 334 TWNLLISGYVHQGLVENAI-YMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCY 392

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            I+  F S   + S+ +  Y   G + ++ +  +   + D+  W  +++A    G + EA
Sbjct: 393 CIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEA 452

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F+ +                          + +S+ P VI             +I +
Sbjct: 453 LRLFYEM--------------------------QLESVPPNVITWNL---------IILS 477

Query: 594 YAKCGDIKGARMAFDQSFNSN---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
             + G +  A+  F Q  +S    ++I + T++     +G   EA+    KM+ + ++P+
Sbjct: 478 LLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPN 537

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             +    +SAC +   +  G  +   +        S      LVDM ++ G +  A+ V 
Sbjct: 538 VFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVF 597

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGN 734
               +   P +Y +++S   ++GN
Sbjct: 598 GSKLYSELP-LYNAMISAYALYGN 620



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/522 (19%), Positives = 204/522 (39%), Gaps = 76/522 (14%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N++    G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 267 VTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDR 326

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +  G  +  + M   M+      +   + ++M         + G
Sbjct: 327 MIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLG 386

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++   E +  +  + ++ YAK G V  A++VF S    D+  WN ++  YA  
Sbjct: 387 KEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAES 446

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 447 GLSGEALRLFYEMQLESVPPNVITW----------------------------------- 471

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I   +++  ++ A ++F +M       ++ISW T+  G  +N    +      K   
Sbjct: 472 NLIILSLLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQE 531

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
           SG RPN  + ++ L  C  L  L  G  +    + +       ++ +SL+ M+ +CG + 
Sbjct: 532 SGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDIN 591

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETC 458
            A  VF +  Y  +  +N ++S Y       + +  + ++ E  G++ +  T   V+  C
Sbjct: 592 KAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSAC 651

Query: 459 CRSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
             + +  Q +      + K G   C                               +  +
Sbjct: 652 NHAGDINQAIEIFTDMVSKHGMKPC-------------------------------LEHY 680

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           G M+  L   G   +A+++     E   KPD  ++ +++ SC
Sbjct: 681 GLMVDLLASAGETEKALSLIE---EMPYKPDARMIQSLVASC 719



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 146/344 (42%), Gaps = 73/344 (21%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF---- 95
           L+ D + L+  +S +   ++  LG +V  + ++  F +DI L +  + MY+KCG      
Sbjct: 363 LKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAK 422

Query: 96  ---------------------------GWGLRVFDEM----AERNLVSWTLIVSAAIQNG 124
                                      G  LR+F EM       N+++W LI+ + ++NG
Sbjct: 423 KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 482

Query: 125 EFDMGLKMYVDMKTNG-----------------------------------FMPNEFAVG 149
           + +   +M++ M+++G                                     PN F++ 
Sbjct: 483 QVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSIT 542

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISS 208
             +  CV++ +  FG SIH + ++ +   +   +  S+++ YAK GD+  AERVF S   
Sbjct: 543 VALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGSKLY 602

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQ 267
            ++  +NAMI  YA  G   EA+ +  S+  + GI  D  T  N L  C+   D +   +
Sbjct: 603 SELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDINQAIE 662

Query: 268 I-HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           I   ++ +  ++  +     ++D+   +   + A  + E M  K
Sbjct: 663 IFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYK 706



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 2/125 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S +R +   +  +LS   NL S   G  +HG+I++    ++   ++ +L+ MY+KCG  
Sbjct: 531 ESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDI 590

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKV 154
               RVF       L  +  ++SA    G     + +Y  ++ + G  P+   + +V+  
Sbjct: 591 NKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSA 650

Query: 155 CVSMG 159
           C   G
Sbjct: 651 CNHAG 655


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 202/740 (27%), Positives = 345/740 (46%), Gaps = 77/740 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  +V  G     FL + L+ +Y + G      R+FD+M+ERN+ SWT I+    
Sbjct: 107 LGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC 166

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+++  +K++  M   G  P+ F    V K C  +     G  ++ + L I  E N  
Sbjct: 167 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 226

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L+ + K G +  A R F  I   DV  WN M+ GY   G   +AL  +S M   G
Sbjct: 227 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG 286

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ T+                                   NA+I  Y +S   + A 
Sbjct: 287 VKPDQVTW-----------------------------------NAIISGYAQSGQFEEAS 311

Query: 302 KVFERMA-----DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           K F  M        +V+SW  L  G  +N    +  S+F K +L G +PN +T +  +  
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C  L  L  G ++    +    LD +  V +SL+  + +C +VE+A   F  +   ++ +
Sbjct: 372 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 431

Query: 416 WNELLSGYC----------------FNCCDADV-------------------LKTFCNIW 440
           WN +L+GY                 F   + D+                   L+ F  + 
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G++ N  T    +  C +  N ++  +IHG +++        + S+LI  Y     L+
Sbjct: 492 SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLE 551

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +    +     D+  W +++SA    G +  A+ +   +  +  + +   + + L +C+
Sbjct: 552 VACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + A ++ K IH F+I+ G +T  ++ +++ID Y +CG I+ +R  FD      D++ +N
Sbjct: 612 KLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDL-MPQRDLVSWN 670

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            +I  Y  HG   +A+ +F + +   L+P+  TF +++SACSH GL+++G   FK M ++
Sbjct: 671 VMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y M P+ + Y C+VD+LSR G   +    IE MPF+P+  V+ SLL  CRIH N +L E+
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
           A+  L  L P++   +VL++
Sbjct: 791 AARYLFELEPQSSGNYVLMA 810



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 164/714 (22%), Positives = 288/714 (40%), Gaps = 118/714 (16%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D     K       LK+  +G  V+ +++ +GF  +  ++ +++ M+ KCG      
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F+E+  +++  W ++VS     GEF   LK   DMK +G  P++              
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN---------- 295

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-----SDDVGCW 214
                                    ++++ YA+ G    A + F  +        +V  W
Sbjct: 296 -------------------------AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            A+I G    GY FEAL+V   M+ EG+  +  T  +A+  C+ ++    GR+IHG  I+
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 275 -SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF----------- 322
             E++  + + N+L+D Y K   ++ A + F  +   D++SWN +  G+           
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450

Query: 323 --SENKNPGQTASL----------------------FHKFILSGSRPNHVTFSILLRQCG 358
             SE K  G    +                      F +    G  PN  T S  L  CG
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           ++ +L LG ++    L         V S+LI M+  C ++E+A SVF  +S +++  WN 
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S    +    + L     +  S VEVN  T    +  C +    +   +IH  II+ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +C +I +SLI  Y   G +  S    +   + D+ SW  M+S     G   +AV +F 
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
                G KP+      +L++C+           H  +I+ G+               K  
Sbjct: 691 QFRTMGLKPNHITFTNLLSACS-----------HSGLIEEGW---------------KYF 724

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +     A D +        Y  ++   +  G  +E +E  +KM     +P+ A + S++
Sbjct: 725 KMMKTEYAMDPAVEQ-----YACMVDLLSRAGQFNETLEFIEKMP---FEPNAAVWGSLL 776

Query: 659 SACS---HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
            AC    +  L +        ++ Q     S   Y  + ++ S  G  EDA  +
Sbjct: 777 GACRIHCNPDLAEYAARYLFELEPQ-----SSGNYVLMANIYSAAGRWEDAAKI 825



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/626 (21%), Positives = 259/626 (41%), Gaps = 79/626 (12%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            S+++ C  +     G+ +H   +   ++   F+G  +L  Y + G V  A R+F  +S 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W A++  Y   G   E + +   M+ EG+  D + F    + CS + ++ +G+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           +  ++    E +  +  +++DM+IK   MD A + FE +  KDV  WN +  G++     
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +         LSG +P+ VT+                                   +++
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 389 IYMFCRCGAVEMAHSVFDNVS-----YKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           I  + + G  E A   F  +        N+ +W  L++G   N  D + L  F  +   G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNS 502
           V+ N  T    V  C      +   +IHG  IK     S   + +SL+  Y     ++ +
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI-------------------------- 536
                  ++ D+ SW AM++    +G + EA+ +                          
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 537 ---------FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
                    F  +   G  P+   +   L +C  +   +  K IH +V++        V 
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA+I  Y+ C  ++ A   F +  ++ DV+V+N++I A A  G    A+++  +M L+N+
Sbjct: 538 SALISMYSGCDSLEVACSVFSE-LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           + +  T VS + ACS    + +G  + + +  + G+         L+DM  R G ++ ++
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHG 733
            + ++MP Q     +  ++S   +HG
Sbjct: 656 RIFDLMP-QRDLVSWNVMISVYGMHG 680



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/439 (23%), Positives = 215/439 (48%), Gaps = 33/439 (7%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + + LQ C  + +  +G Q+H  ++ + V+    + + L+++Y ++  ++ A ++F++M+
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           +++V SW  +   +    +  +T  LF+  +  G RP+H  F  + + C +L +  +G  
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    L  GF     V  S++ MF +CG +++A   F+ + +K++  WN ++SGY     
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               LK   ++  SGV+ +  T+                     AII +G++  G     
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTW--------------------NAII-SGYAQSGQF-EE 309

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
             K ++  G L +         + ++ SW A+++     G++ EA+++F  +V  G KP+
Sbjct: 310 ASKYFLEMGGLKDF--------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAF 607
              + + +++C  +   +  + IH + IK+   ++++ V ++++D YAKC  ++ AR  F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
                  D++ +N ++  YA  G   EA+E+  +MK   ++P   T+  +++  +  G  
Sbjct: 422 GM-IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480

Query: 668 DKGCLLFKSMDSQYGMQPS 686
                 F+ M S  GM P+
Sbjct: 481 KAALEFFQRMHSM-GMDPN 498



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 547 PDE--YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           PDE   I  +IL  C  +   +    +H  ++  G +   ++ S +++ Y + G ++ AR
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD+  +  +V  +  ++  Y   G   E +++F  M    ++P    F  V  ACS  
Sbjct: 145 RMFDK-MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
                G  ++  M S  G + +    G ++DM  + G ++ A+   E + F+
Sbjct: 204 KNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 254


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 189/682 (27%), Positives = 336/682 (49%), Gaps = 7/682 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QV+    K G + + ++   ++ + +K G     LRVF +    + V W   VS A++NG
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E  + ++M+ DM      PN F     +  C +      G ++H   L+   E + FVG 
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++N YAK GD+ AA R F+ +   +V  W   I G+        A+ ++  M+  G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +KYT  + L  C+ ++      QIHG+++++E+     +  ALI  Y     ++ + KVF
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 305 ERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           E        S W+    G S N +  ++  L  +    G RPN   ++ +         +
Sbjct: 330 EEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---I 385

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G QL   A+  GF+    V S+L  M+ RC  V+ ++ VF+ +  ++  +W  +++G+
Sbjct: 386 EFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGF 445

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +   TF N+   G + +  +   ++  C R E      ++HG  ++  +    
Sbjct: 446 ATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETT 504

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           +I    I  Y     +  +    +   R D   W +M+S     G   EA+++F  +V A
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAA 564

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             + D YI  +IL+ CA I      K +H + IK G  ++  V+S+++  Y++ G++  +
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD+  +  D++ + T+I  YA HG    A+ +FD M    ++P     VSV+SACS 
Sbjct: 625 RKVFDE-ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F SM + YG++P    Y C+VD+L R+G L +AK+ ++ MP +P   V+ 
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743

Query: 724 SLLSGCRIHGNKELGEWASEKL 745
           +LL+ CR+H +  LG +   K+
Sbjct: 744 TLLAACRVHDDTVLGRFVENKI 765



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 145/606 (23%), Positives = 274/606 (45%), Gaps = 31/606 (5%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P++FA G+ +  C    A      ++C A K  +  N +V   +++  AK G +  A RV
Sbjct: 67  PSQFAYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F         CWNA + G    G G  A+ +   M++     + +T+  AL  C+   + 
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +GR +HGL++R + E  + +  +L++MY K   M  A + F RM  ++V+SW T   GF
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            ++  P     L  + + +G   N  T + +L  C ++  +    Q+  + L      + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDC 306

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            V  +LI  +   G +E++  VF+   +  N + W+  +SG   N      ++    ++ 
Sbjct: 307 VVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFH 365

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G+  N   +  V  +     + +  GQ+H + IK GF     + S+L   Y     + +
Sbjct: 366 QGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQD 422

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S++     +  D  SW AM++     GH+ EA   F +++  G KPD   L  IL++C  
Sbjct: 423 SYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNR 482

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
                + K +H   +++ +    ++    I  Y+KC  ++ AR  FD +    D +++++
Sbjct: 483 PECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDAT-PRKDQVMWSS 540

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----------HKGLVDKG 670
           +I  YA +G   EA+ +F  M  A+++       S++S C+           H   +  G
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
            L  +S+ S             LV + SR+G ++D++ V + +   P    + +++ G  
Sbjct: 601 ILSDQSVSSS------------LVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYA 647

Query: 731 IHGNKE 736
            HG+ +
Sbjct: 648 QHGSSQ 653



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 180/373 (48%), Gaps = 3/373 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S   G Q+H   +K GF + I + + L  MYS+C       +VF+EM ER+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +V+    +G        + +M  +GF P+  ++ +++  C        G  +H   
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHT 496

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L++  E   F+    ++ Y+K   V  A R+F +    D   W++MI GYA  G G EA+
Sbjct: 497 LRVYGETT-FINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAI 555

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M+   I +D Y   + L  C+ +A     + +HG  I++ +    S+ ++L+ +Y
Sbjct: 556 SLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVY 615

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +S  MD + KVF+ ++  D+++W T+  G++++ +     ++F   +  G RP+ V   
Sbjct: 616 SRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLV 675

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +L  C +   ++ G      +    G   E      ++ +  R G +  A    D++  
Sbjct: 676 SVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 411 K-NITTWNELLSG 422
           K ++  W+ LL+ 
Sbjct: 736 KPDLMVWSTLLAA 748



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 26/306 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D + L   LS     +  + G +VHGH +++ +    F+ +  I+MYSKC       
Sbjct: 466 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTAR 524

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD    ++ V W+ ++S    NG  +  + ++  M       + +   S++ +C  + 
Sbjct: 525 RIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIA 584

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              +   +H +A+K  I  +  V  S++  Y++ G++  + +VF  IS  D+  W  +I 
Sbjct: 585 RPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIID 644

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLI 272
           GYA  G    AL +   M+  G+  D    ++ L  CS   LV      F+  R  +G  
Sbjct: 645 GYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG-- 702

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTL-----------FG 320
               VE  +     ++D+  +S  +  A    + M  K D++ W+TL            G
Sbjct: 703 ----VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLG 758

Query: 321 GFSENK 326
            F ENK
Sbjct: 759 RFVENK 764


>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
 gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 194/696 (27%), Positives = 335/696 (48%), Gaps = 19/696 (2%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D  LQN+L+ MY KCG      RVF  +  +N  SWT +++A  QNG     ++++ DM 
Sbjct: 164 DEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMM 223

Query: 138 TNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR---IEKNPFVGCSVLNFYAKL 193
           + G + P+      V+  C ++G  E G  IH    +I    +E +  +   +L+ +A+ 
Sbjct: 224 SEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARC 283

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +     +F  +    V  W  MI  Y   GY  EAL +   M    I  D     N L
Sbjct: 284 GSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVL 340

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           Q CS + + + GR +H  I   + E S+ +   L+DMY+K   +  A + F+    +DVI
Sbjct: 341 QACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVI 400

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW +L   +S      +   +FH   L G  PN +TF  ++  C +L  L  G  L    
Sbjct: 401 SWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRV 460

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  G + +E V ++L+ M+ + G V+ A  VFD++  K   +W  +L     N    + L
Sbjct: 461 VATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEAL 520

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + +  I   G       F   + +C   E+      IHG I  + F     + + L+  Y
Sbjct: 521 EMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVY 580

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G+L+ +    +     +  SW  M+      G   EA+ ++ ++     +P+     
Sbjct: 581 AKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFV 637

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
            +++SCA +GA    + +H  +   G      + +A+++ YAKCG +  AR  FD ++  
Sbjct: 638 PVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTY-C 696

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D   +N++  AYA  G  S+ +E++ +M L  +QP+  T +SV+ ACSH G++++    
Sbjct: 697 PDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHR 756

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ-----PSP---TVYRSL 725
           F+ M + +G+ P+ + Y C+ D+L R+G LE+A+ V+++   +      SP   + + S 
Sbjct: 757 FECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSF 816

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           L  C+ H +      A+EKL  L P++ A +VLLS+
Sbjct: 817 LGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQ 852



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 179/659 (27%), Positives = 320/659 (48%), Gaps = 17/659 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS    LK    G +VH  I +     D  LQN L+ +Y+KCG      R+F+ M  R +
Sbjct: 37  LSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTV 96

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-- 168
            +W  +++A +Q+  F   L+ +  M      P+     SV+  C S    E G +IH  
Sbjct: 97  ATWNTMITAYVQHDFFQEALEAFRRMDAP---PSSITFTSVLGACCSPDDLETGKAIHRQ 153

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
                 +I+ +  +  S++  Y K G +  AERVF+ I   +   W AMI  YA  GY  
Sbjct: 154 IGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYER 213

Query: 229 EALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS---EVECSISIV 284
            A+ V   M+ EG +  D  T+   L  CS + D + G +IH LI R     +E    + 
Sbjct: 214 RAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQ 273

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           + ++ ++ +   +    ++F+RM  + V++W T+   +++     +   L+H   +    
Sbjct: 274 DGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIE--- 330

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ +  S +L+ C +L +L+ G  +        F     V + L+ M+ +CG +  A   
Sbjct: 331 PDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRT 390

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD    +++ +W  L++ Y       + L+ F ++   GVE N  TF  V++ C R  + 
Sbjct: 391 FDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSL 450

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                +H  ++ TG  S  ++ ++L+  Y  FG++D +    +        SW  M+ AL
Sbjct: 451 LPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVAL 510

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              GH+HEA+ ++  +   G +P   I    L SC A+    R ++IH  +    F  ++
Sbjct: 511 TQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDL 570

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            +++ +++ YAKCG+++ AR+ FDQ    N+V  + T+I  YA +G  +EA+E++  M  
Sbjct: 571 VLSNVLMNVYAKCGELEKARLVFDQMTEKNEV-SWTTMIGGYAQNGRPAEALELYKAM-- 627

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            ++QP+   FV V+S+C+  G + +G  +   + S  G+Q +      LV+M ++ G L
Sbjct: 628 -DVQPNFIAFVPVISSCADLGALVEGQRVHARL-SDAGLQNNEVIVTALVNMYAKCGKL 684



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/611 (23%), Positives = 281/611 (45%), Gaps = 28/611 (4%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++SA  Q G     L++Y +M   G  PN+     V+  C  +   E G  +H    +  
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
              +  +  ++LN YAK GD+  + R+F ++    V  WN MI  Y    +  EAL    
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS--EVECSISIVNALIDMYIK 293
            M          TF + L  C    D + G+ IH  I  S  +++    + N+L+ MY K
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSI 352
              ++ A +VF  +  K+  SW  +   +++N    +   +F   +  G   P+ +T++ 
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237

Query: 353 LLRQCGKLLDLDLGLQLQCLALH----CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +L  C  L DL+ G+++  L +H     G   ++ +   ++ +  RCG++     +FD +
Sbjct: 238 VLTACSTLGDLETGMRIHAL-IHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
            ++ + TW  +++ Y       + L+ +  +    +E +      V++ C R +N +   
Sbjct: 297 PHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGR 353

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +H  I    F     + + L+  YV  G L  +    +G +  D+ SW ++++A  H+ 
Sbjct: 354 AVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHEN 413

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              EA+ +FHS+   G +P+     T++++C+ + +    +++H  V+  G  ++ +V +
Sbjct: 414 FGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN 473

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++  Y+K G +  ARM FD S        +  +++A   +G   EA+E++ ++ L   +
Sbjct: 474 ALVSMYSKFGRVDFARMVFD-SIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFR 532

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV------DMLSRNGY 702
           P    F + + +C+    V +   +       +G+  S D Y  LV      ++ ++ G 
Sbjct: 533 PGSPIFSAALVSCTALEDVSRARAI-------HGVIKSSDFYPDLVLSNVLMNVYAKCGE 585

Query: 703 LEDAKHVIEIM 713
           LE A+ V + M
Sbjct: 586 LEKARLVFDQM 596



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 252/524 (48%), Gaps = 15/524 (2%)

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI  YA  GY  EAL +   M   G+  +  TF   L  C+ + D + G+++H  I  S 
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                 + NAL+++Y K   ++ + ++FE M  + V +WNT+   + ++    +    F 
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLG--LQLQCLALHCGFLDEENVTSSLIYMFCR 394
           +     + P+ +TF+ +L  C    DL+ G  +  Q          +E + +SL+ M+ +
Sbjct: 121 RM---DAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFY 453
           CG++E A  VF  +  KN  +W  +++ Y  N  +   ++ F ++   G VE +  T+  
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237

Query: 454 VVETCCRSENQQMVGQIHGAIIKT---GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           V+  C    + +   +IH  I +    G      +   ++  +   G L  + E  +   
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
              + +W  M++A   +G++ EA+ ++H +     +PD+  L  +L +C+ +   ++ ++
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRA 354

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  +    F   + V + ++D Y KCGD+  AR  FD  F + DVI + +LI AY+H  
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFD-GFKARDVISWTSLITAYSHEN 413

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              EA+E+F  M+L  ++P+  TF +V+ ACS    +  G  L   + +  G        
Sbjct: 414 FGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVAT-GHISDEFVG 472

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             LV M S+ G ++ A+ V + +P +  P+ +R +L     +G+
Sbjct: 473 NALVSMYSKFGRVDFARMVFDSIPVKRYPS-WRVMLVALTQNGH 515



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 193/419 (46%), Gaps = 3/419 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I L+  L     LK+   G  VH  I    F   + +Q  L+ MY KCG      
Sbjct: 329 IEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEAR 388

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R FD    R+++SWT +++A          L+++  M+  G  PN     +V+  C  + 
Sbjct: 389 RTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLS 448

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G ++H   +      + FVG ++++ Y+K G V  A  VF SI       W  M+ 
Sbjct: 449 SLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLV 508

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
                G+  EAL + S +  EG       F  AL  C+ + D    R IHG+I  S+   
Sbjct: 509 ALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYP 568

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + + N L+++Y K   ++ A  VF++M +K+ +SW T+ GG+++N  P +   L+    
Sbjct: 569 DLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMD 628

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           +   +PN + F  ++  C  L  L  G ++       G  + E + ++L+ M+ +CG + 
Sbjct: 629 V---QPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLG 685

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +A   FD+    +   WN + + Y      + VL+ +  +   GV+ NG T   V+  C
Sbjct: 686 LAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVAC 744



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 2/121 (1%)

Query: 44  PIFLA--KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           P F+A    +S   +L + V G +VH  +   G  N+  +   L+ MY+KCG  G     
Sbjct: 631 PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVTALVNMYAKCGKLGLAREF 690

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FD     +  +W  + +A  Q G     L++Y +M   G  PN   + SV+  C  MG  
Sbjct: 691 FDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGML 750

Query: 162 E 162
           E
Sbjct: 751 E 751


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 202/740 (27%), Positives = 344/740 (46%), Gaps = 77/740 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  +V  G     FL + L+ +Y + G      R+FD+M+ERN+ SWT I+    
Sbjct: 107 LGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYC 166

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+++  +K++  M   G  P+ F    V K C  +     G  ++ + L I  E N  
Sbjct: 167 GLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSC 226

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L+ + K G +  A R F  I   DV  WN M+ GY   G   +AL  +S M   G
Sbjct: 227 VKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG 286

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ T+                                   NA+I  Y +S   + A 
Sbjct: 287 VKPDQVTW-----------------------------------NAIISGYAQSGQFEEAS 311

Query: 302 KVFERMA-----DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           K F  M        +V+SW  L  G  +N    +  S+F K +L G +PN +T +  +  
Sbjct: 312 KYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSA 371

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C  L  L  G ++    +    LD +  V +SL+  + +C +VE+A   F  +   ++ +
Sbjct: 372 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 431

Query: 416 WNELLSGYC----------------FNCCDADV-------------------LKTFCNIW 440
           WN +L+GY                 F   + D+                   L+ F  + 
Sbjct: 432 WNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMH 491

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G++ N  T    +  C +  N ++  +IHG +++        + S+LI  Y     L+
Sbjct: 492 SMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLE 551

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +    +     D+  W +++SA    G +  A+ +   +  +  + +   + + L +C+
Sbjct: 552 VACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACS 611

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + A ++ K IH F+I+ G +T  ++ +++ID Y +CG I+ +R  FD      D++ +N
Sbjct: 612 KLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDL-MPQRDLVSWN 670

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            +I  Y  HG   +A+ +F   +   L+P+  TF +++SACSH GL+++G   FK M ++
Sbjct: 671 VMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTE 730

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y M P+ + Y C+VD+LSR G   +    IE MPF+P+  V+ SLL  CRIH N +L E+
Sbjct: 731 YAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEY 790

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
           A+  L  L P++   +VL++
Sbjct: 791 AARYLFELEPQSSGNYVLMA 810



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 164/714 (22%), Positives = 288/714 (40%), Gaps = 118/714 (16%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D     K       LK+  +G  V+ +++ +GF  +  ++ +++ M+ KCG      
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F+E+  +++  W ++VS     GEF   LK   DMK +G  P++              
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWN---------- 295

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-----SDDVGCW 214
                                    ++++ YA+ G    A + F  +        +V  W
Sbjct: 296 -------------------------AIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            A+I G    GY FEAL+V   M+ EG+  +  T  +A+  C+ ++    GR+IHG  I+
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 275 -SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF----------- 322
             E++  + + N+L+D Y K   ++ A + F  +   D++SWN +  G+           
Sbjct: 391 VEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIE 450

Query: 323 --SENKNPGQTASL----------------------FHKFILSGSRPNHVTFSILLRQCG 358
             SE K  G    +                      F +    G  PN  T S  L  CG
Sbjct: 451 LLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACG 510

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           ++ +L LG ++    L         V S+LI M+  C ++E+A SVF  +S +++  WN 
Sbjct: 511 QVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNS 570

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S    +    + L     +  S VEVN  T    +  C +    +   +IH  II+ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +C +I +SLI  Y   G +  S    +   + D+ SW  M+S     G   +AV +F 
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
                G KP+      +L++C+           H  +I+ G+               K  
Sbjct: 691 XFRTMGLKPNHITFTNLLSACS-----------HSGLIEEGW---------------KYF 724

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +     A D +        Y  ++   +  G  +E +E  +KM     +P+ A + S++
Sbjct: 725 KMMKTEYAMDPAVEQ-----YACMVDLLSRAGQFNETLEFIEKMP---FEPNAAVWGSLL 776

Query: 659 SACS---HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
            AC    +  L +        ++ Q     S   Y  + ++ S  G  EDA  +
Sbjct: 777 GACRIHCNPDLAEYAARYLFELEPQ-----SSGNYVLMANIYSAAGRWEDAAKI 825



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/626 (21%), Positives = 259/626 (41%), Gaps = 79/626 (12%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            S+++ C  +     G+ +H   +   ++   F+G  +L  Y + G V  A R+F  +S 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSE 152

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W A++  Y   G   E + +   M+ EG+  D + F    + CS + ++ +G+ +
Sbjct: 153 RNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDV 212

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           +  ++    E +  +  +++DM+IK   MD A + FE +  KDV  WN +  G++     
Sbjct: 213 YDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEF 272

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +         LSG +P+ VT+                                   +++
Sbjct: 273 KKALKCISDMKLSGVKPDQVTW-----------------------------------NAI 297

Query: 389 IYMFCRCGAVEMAHSVFDNVS-----YKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           I  + + G  E A   F  +        N+ +W  L++G   N  D + L  F  +   G
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNS 502
           V+ N  T    V  C      +   +IHG  IK     S   + +SL+  Y     ++ +
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI-------------------------- 536
                  ++ D+ SW AM++    +G + EA+ +                          
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477

Query: 537 ---------FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
                    F  +   G  P+   +   L +C  +   +  K IH +V++        V 
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA+I  Y+ C  ++ A   F +  ++ DV+V+N++I A A  G    A+++  +M L+N+
Sbjct: 538 SALISMYSGCDSLEVACSVFSE-LSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 596

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           + +  T VS + ACS    + +G  + + +  + G+         L+DM  R G ++ ++
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHG 733
            + ++MP Q     +  ++S   +HG
Sbjct: 656 RIFDLMP-QRDLVSWNVMISVYGMHG 680



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/439 (22%), Positives = 214/439 (48%), Gaps = 33/439 (7%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + + LQ C  + +  +G Q+H  ++ + V+    + + L+++Y ++  ++ A ++F++M+
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           +++V SW  +   +    +  +T  LF+  +  G RP+H  F  + + C +L +  +G  
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    L  GF     V  S++ MF +CG +++A   F+ + +K++  WN ++SGY     
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               LK   ++  SGV+ +  T+  ++    +S      GQ   A               
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIISGYAQS------GQFEEA--------------- 310

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
             K ++  G L +         + ++ SW A+++     G++ EA+++F  +V  G KP+
Sbjct: 311 -SKYFLEMGGLKDF--------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPN 361

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAF 607
              + + +++C  +   +  + IH + IK+   ++++ V ++++D YAKC  ++ AR  F
Sbjct: 362 SITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF 421

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
                  D++ +N ++  YA  G   EA+E+  +MK   ++P   T+  +++  +  G  
Sbjct: 422 GM-IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDG 480

Query: 668 DKGCLLFKSMDSQYGMQPS 686
                 F+ M S  GM P+
Sbjct: 481 KAALEFFQRMHSM-GMDPN 498



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 547 PDE--YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           PDE   I  +IL  C  +   +    +H  ++  G +   ++ S +++ Y + G ++ AR
Sbjct: 85  PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 144

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD+  +  +V  +  ++  Y   G   E +++F  M    ++P    F  V  ACS  
Sbjct: 145 RMFDK-MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSEL 203

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
                G  ++  M S  G + +    G ++DM  + G ++ A+   E + F+
Sbjct: 204 KNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 254


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 213/714 (29%), Positives = 357/714 (50%), Gaps = 22/714 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-CGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG Q+HG I+K  + ND  L N LI+MY K  GY  +   VFDE+  RN + W  IVS  
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 121 IQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVC---VSMGASEFGYSIHCFALK 173
            Q G+     +++  M+         PNE+  GS++      V  G S  G  I     K
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLG-QILARIKK 179

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  N +VG ++   +++LG    A ++F  +++ +    N ++ G      G EA+ V
Sbjct: 180 SGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEV 239

Query: 234 VSSML-FEGITMDKYTFINALQGCSLVADFD----IGRQIHGLIIRSEV-ECSISIVNAL 287
                    I +D Y  +  L  C+  A  D     GR++HG  IR+ + +  +++ N L
Sbjct: 240 FKETRHLVDINVDSYVIL--LSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGL 297

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           I+MY K   +D+A  VF  M DKD +SWN++  G  +NK        ++    +G  P++
Sbjct: 298 INMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T    L  C  L  + LG Q     +  G   + +V+++L+ ++   G +     VF  
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSW 417

Query: 408 VSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           +  ++  +WN ++     +    ++ ++ F  +  +G   N  TF  ++ T       ++
Sbjct: 418 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 477

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALV 525
             QIH  I+K        I ++L+  Y   G+++N  E FS  +ER D  SW +M+S  +
Sbjct: 478 SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYI 537

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
           H     +A+ +   +++ G++ D +   T+L++CA +   +R   +H   I+    ++V 
Sbjct: 538 HNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVV 597

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + SA++D Y+KCG I  A   F+     N +  +N++I  YA HG    A+ +F +MKL+
Sbjct: 598 IGSALVDMYSKCGRIDYASRFFNLMPMRN-LYSWNSMISGYARHGYGDNALRLFTRMKLS 656

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
              P   TFV V+SACSH GLVD+G   FKSM   YG+ P  + Y C+VD+L R G L+ 
Sbjct: 657 GQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDK 716

Query: 706 AKHVIEIMPFQPSPTVYRSLLSG-CRIHGNK-ELGEWASEKLLLLLPKNDAAHV 757
             + I  MP +P+  ++R++L   CR +G K ELG  A+E L  + P+N   ++
Sbjct: 717 IDNFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVMNI 770



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 167/650 (25%), Positives = 304/650 (46%), Gaps = 30/650 (4%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS--MGASE 162
           M +RN V+W  ++S   QNG  D    +  +M   GF+PN FA GS ++ C    +   +
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGY 221
            G  IH   LK     +  +   +++ Y K LG +  A  VF  I   +   WN+++  Y
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIEIRNSIYWNSIVSVY 120

Query: 222 AHCGYGFEALNVVSSMLF--EGITM--DKYTFINALQ-GCSLV-ADFDIGRQIHGLIIRS 275
           +  G       + SSM     G+++  ++YTF + +   CS V +   +  QI   I +S
Sbjct: 121 SQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLGQILARIKKS 180

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +  ++ + +AL   + +    DYA K+FE+M  ++ +S N L  G    K  G+ A   
Sbjct: 181 GLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQK-CGEEAVEV 239

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLD----LGLQLQCLALHCGFLDEE-NVTSSLIY 390
            K        N  ++ ILL  C +   LD     G ++   A+  G  D +  V + LI 
Sbjct: 240 FKETRHLVDINVDSYVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLIN 299

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG ++ A SVF  +  K+  +WN +++G   N C  D +K++ ++ ++G+  +  T
Sbjct: 300 MYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFT 359

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGA 509
               + +C       +  Q HG  IK G      + ++L+  Y   G L    + FS   
Sbjct: 360 LISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWML 419

Query: 510 ERLDMASWGAMMSALVHQGHN-HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
           ER D  SW  ++ AL   G +  EA+ +F  ++ AG  P+      +L + +++   + +
Sbjct: 420 ER-DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 478

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
             IH  ++K     +  + +A++  Y K G+++     F +     D + +N++I  Y H
Sbjct: 479 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 538

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG-----CLLFKSMDSQYGM 683
           + L+ +AM++   M     +    TF +V+SAC+    +++G     C +   ++S   +
Sbjct: 539 NDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVI 598

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
             +      LVDM S+ G ++ A     +MP +   + + S++SG   HG
Sbjct: 599 GSA------LVDMYSKCGRIDYASRFFNLMPMRNLYS-WNSMISGYARHG 641



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 10/394 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  +LS   +L   +LG Q HG  +KLG   D+ + N L+A+Y++ G+     +VF  M 
Sbjct: 360 LISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWML 419

Query: 107 ERNLVSWTLIVSAAIQNG-EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           ER+ VSW  ++ A   +G      ++++++M   G+ PN     +++    S+  S+  +
Sbjct: 420 ERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSH 479

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAH 223
            IH   LK  ++ +  +  ++L  Y K G++   E +F  +S   D+V  WN+MI GY H
Sbjct: 480 QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS-WNSMISGYIH 538

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                +A+++V  M+  G  +D +TF   L  C+ VA  + G ++H   IR+ +E  + I
Sbjct: 539 NDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVI 598

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            +AL+DMY K   +DYA + F  M  +++ SWN++  G++ +        LF +  LSG 
Sbjct: 599 GSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQ 658

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            P+H+TF  +L  C  +  +D G +  + +    G +      S ++ +  R G ++   
Sbjct: 659 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKID 718

Query: 403 SVFDNVSYK-NITTWNELLSGYCFNCCDADVLKT 435
           +  + +  K NI  W  +L      CC  +  KT
Sbjct: 719 NFINKMPIKPNILIWRTVLGA----CCRGNGRKT 748



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 5/142 (3%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS    + +   G +VH   ++    +D+ + + L+ MYSKCG   +  R
Sbjct: 558 RLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASR 617

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F+ M  RNL SW  ++S   ++G  D  L+++  MK +G +P+      V+  C  +G 
Sbjct: 618 FFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGL 677

Query: 161 SEFGYS-----IHCFALKIRIE 177
            + G+         + L  R+E
Sbjct: 678 VDEGFEYFKSMTEVYGLVPRVE 699


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 198/703 (28%), Positives = 350/703 (49%), Gaps = 7/703 (0%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           RV G  +H   +K G  +D  L + LI+MY+          VFD    ++LVS+  ++SA
Sbjct: 256 RVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISA 315

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEK 178
            +Q+  +    +++  M   G  PN   + SV+  C  +      G S+H   +K+ + +
Sbjct: 316 YMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAE 375

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
              V  ++++ Y+KLG + ++  +F   +  +   WN+MI GY        AL+    M 
Sbjct: 376 QVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQ 435

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+  D  T IN + GC    D  + + IH   +R+  E   S++NAL+ MY     + 
Sbjct: 436 IAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDIS 495

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            ++ +F++M  + +ISWNT+  GF+E  +   + +LF +        + VT   L+    
Sbjct: 496 TSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLS 555

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
              D  +G  +  LA+  G + + ++T++LI M+  CG VE    +F++   +N  T+N 
Sbjct: 556 VSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNA 615

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKT 477
           L+SGY  N     +L  F  + ++  + N  T   ++  C      Q+ G+ IH   ++ 
Sbjct: 616 LMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC----QSQLQGKCIHSYAVRN 671

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                  + +S +  Y  F  ++      +     ++  W A +SA V        V  F
Sbjct: 672 FTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYF 731

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             ++    +PDE  +  ++++C+ +G       I   +++ GF+  + V +A+ID +++C
Sbjct: 732 KHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRC 791

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G I  AR  FD S    D + +  +I AY+ HG    A+++F  M  + + P   TFVS+
Sbjct: 792 GSISFARELFDSSVE-KDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSI 850

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH GLV++G  LFKS+ + +G+ P  + Y C+VD+L R G+L++A  ++  MPF P
Sbjct: 851 LSACSHNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTP 910

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           S  +  SLL  CR HGN ++GE   + L+        ++V+LS
Sbjct: 911 SDNLLESLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLS 953



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 180/722 (24%), Positives = 340/722 (47%), Gaps = 19/722 (2%)

Query: 18  FHATRKRIHR-LCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT 76
           FH     ++R LCG   F SD+F     I    + S  +      LG QVH  +++ G  
Sbjct: 121 FHRELLDLYRGLCG---FGSDNFTFPPVIRACTAASCLQ------LGRQVHCRVLRTGHG 171

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           +++ +Q  L+ MY+K G      RVFD M  R+L+SW  +VS    NG F   ++   +M
Sbjct: 172 SNVGVQTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEM 231

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           +  G  PN   +  ++ +C S G    G S+H FALK     +  +  ++++ YA   D+
Sbjct: 232 QQCGMSPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDL 291

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
           +++  VF      D+  +N+MI  Y       EA  V   M   G+  +  T ++ L  C
Sbjct: 292 SSSRLVFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSC 351

Query: 257 S-LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           S L+   + G  +HG+II+  +   +S+V+AL+ MY K   +D +  +F    +K+ I W
Sbjct: 352 SDLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILW 411

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N++  G+  N         F K  ++G  P+  T   ++  C    DL +   +   A+ 
Sbjct: 412 NSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVR 471

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
             F   ++V ++L+ M+  CG +  ++++F  +  + + +WN ++SG+         L  
Sbjct: 472 NRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTL 531

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           FC ++   V  +  T   ++ +   SE+  +   +H   IK+G  S   + ++LI  Y N
Sbjct: 532 FCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYAN 591

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G ++   +  N     +  ++ A+MS       + + + +F  +V+  EKP+   L T+
Sbjct: 592 CGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPN---LVTL 648

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           LN      +  + K IH + ++     E  + ++ +  Y++  +I+  R  F    ++ +
Sbjct: 649 LNLLPVCQSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSL-VSARN 707

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-KGCLLF 674
           +IV+N  + A          ++ F  M   N++P + T ++++SACS  G  D   C++ 
Sbjct: 708 LIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIM- 766

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            ++  Q G   +      L+D  SR G +  A+ + +    + S T + ++++   +HGN
Sbjct: 767 -AVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVT-WGAMINAYSMHGN 824

Query: 735 KE 736
            E
Sbjct: 825 GE 826



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/603 (23%), Positives = 271/603 (44%), Gaps = 6/603 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAAIQ 122
           ++H  +   G   D F+   L+  Y   G       +F E       + S  L+V     
Sbjct: 59  EIHARLAVAGAIQDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSD 118

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G     L +Y  +   GF  + F    V++ C +    + G  +HC  L+     N  V
Sbjct: 119 HGFHRELLDLYRGL--CGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGV 176

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++L+ YAK G +  + RVF  +   D+  WNAM+ GY+  G   EA+  +  M   G+
Sbjct: 177 QTALLDMYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGM 236

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           + +  T +  +  C    D   G  +H   ++       S+ +ALI MY     +  +  
Sbjct: 237 SPNASTLVGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRL 296

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL- 361
           VF+    KD++S+N++   + ++ N  +   +F     +G  PN +T   +L  C  LL 
Sbjct: 297 VFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLF 356

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            ++ G  +  + +  G  ++ +V S+L+ M+ + G ++ +  +F   + KN   WN ++S
Sbjct: 357 GINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMIS 416

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N      L  FC +  +GV  +  T   V+  C  +++  +   IH   ++  F S
Sbjct: 417 GYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFES 476

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y + G +  S+      E   + SW  M+S     G +  ++T+F  + 
Sbjct: 477 YQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMF 536

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
                 D   L  +++S +        +S+H   IK G  ++V + +A+I  YA CG ++
Sbjct: 537 HEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVE 596

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             +  F+ SF S + I YN L+  Y  + +  + + +F +M   + +P+  T ++++  C
Sbjct: 597 AGQQLFN-SFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVC 655

Query: 662 SHK 664
             +
Sbjct: 656 QSQ 658



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 96/237 (40%), Gaps = 33/237 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + +   +S    L +      +   I++ GF+ +I + N LI  +S+CG   +  
Sbjct: 739 VRPDEVTMLALISACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFAR 798

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD   E++ V+W  +++A   +G  +  L ++  M  +G  P++    S++  C   G
Sbjct: 799 ELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACSHNG 858

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G ++                     F +   D     R+      +   C   ++G
Sbjct: 859 LVEQGRTL---------------------FKSLQADHGITPRM------EHYACMVDLLG 891

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
              H     EA ++V SM F   T       + L  C    ++ IG  +  L+I+SE
Sbjct: 892 RTGHLD---EAYDIVRSMPF---TPSDNLLESLLGACRFHGNYKIGESVGKLLIKSE 942


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 178/586 (30%), Positives = 324/586 (55%), Gaps = 21/586 (3%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  W+A+I  YA+    FEA++    ML  G   ++Y F    + CS   +  +G+ I 
Sbjct: 6   DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65

Query: 270 GLIIRS-EVECSISIVNALIDMYIKSSG-MDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           G ++++   E  + +  ALIDM++K +G ++ A+KVF+RM D++V++W  +   F +   
Sbjct: 66  GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                 LF   +LSG  P+  T S ++  C ++  L LG Q  CL +  G   +  V  S
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185

Query: 388 LIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFNC-CDADVLKTFCNIWESG 443
           L+ M+ +C   G+V+ A  VFD +   N+ +W  +++GY  +  CD + ++ F  + +  
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQ 245

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           V+ N  TF  V++ C    +  +  Q++  ++K   +S   + +SLI  Y   G ++N+ 
Sbjct: 246 VKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENAR 305

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +  +     ++ S+  +++A     ++ EA  +F+ +  AG   + +   ++L+  ++IG
Sbjct: 306 KAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIG 365

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  + + IH  ++K GF + +++ +A+I  Y++CG+I+ A   F++  + N VI + ++I
Sbjct: 366 AIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGN-VISWTSMI 424

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             +A HG  + A+E F KM  A + P++ T+++V+SACSH GL+ +G   FKSM  ++G+
Sbjct: 425 TGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGI 484

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P  + Y C+VD+L R+G+LE+A  ++  MPF+    V R+ L  CR+HGN +LG+ A+E
Sbjct: 485 VPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAE 544

Query: 744 KLLLLLPKNDAAHVLLSK--------------RKRQREGNLLDHEG 775
            +L   P + AA++LLS               RK+ +E NL    G
Sbjct: 545 MILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAG 590



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/531 (27%), Positives = 258/531 (48%), Gaps = 7/531 (1%)

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +R+LVSW+ ++S    N +    +  + DM   GF PNE+    V + C +      G  
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 167 IHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           I  F LK    E +  VGC++++ + K  GD+ +A +VF  +   +V  W  MI  +   
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  +A+++   M+  G   D++T    +  C+ +    +GRQ H L+++S ++  + + 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 285 NALIDMYIK---SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFIL 340
            +L+DMY K      +D A KVF+RM   +V+SW  +  G+ ++    + A  LF + + 
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              +PNH TFS +L+ C  L D+ LG Q+  L +         V +SLI M+ RCG +E 
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   FD +  KN+ ++N +++ Y  +    +  + F  I  +G  VN  TF  ++     
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   QIH  I+K+GF S  +IC++LI  Y   G ++ +F+  N     ++ SW +M
Sbjct: 364 IGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSM 423

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLG 579
           ++     G    A+  FH ++EAG  P+E     +L++C+ +G      K      ++ G
Sbjct: 424 ITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHG 483

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
               +   + V+D   + G ++ A    +      D +V  T + A   HG
Sbjct: 484 IVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHG 534



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 221/416 (53%), Gaps = 9/416 (2%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMA 106
           ++ S  EN+    LG  + G ++K G F +D+ +   LI M+ K  G      +VFD M 
Sbjct: 50  RACSNKENIS---LGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +RN+V+WTL+++   Q G     + +++DM  +G++P+ F +  V+  C  MG    G  
Sbjct: 107 DRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQ 166

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
            HC  +K  ++ +  VGCS+++ YAK    G V  A +VF  +   +V  W A+I GY  
Sbjct: 167 FHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQ 226

Query: 224 C-GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   EA+ +   M+   +  + +TF + L+ C+ ++D  +G Q++ L+++  +     
Sbjct: 227 SGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINC 286

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+LI MY +   M+ A K F+ + +K+++S+NT+   ++++ N  +   LF++   +G
Sbjct: 287 VGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAG 346

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           +  N  TF+ LL     +  +  G Q+    L  GF    ++ ++LI M+ RCG +E A 
Sbjct: 347 TGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAF 406

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            VF+ +   N+ +W  +++G+  +      L+TF  + E+GV  N  T+  V+  C
Sbjct: 407 QVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSAC 462



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 21/380 (5%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC---GYFGWGLRVFDEMAERNLVSWTLIVS 118
           LG Q H  ++K G   D+ +  +L+ MY+KC   G      +VFD M   N++SWT I++
Sbjct: 163 LGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIIT 222

Query: 119 AAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
             +Q+G  D   ++++++M      PN F   SV+K C ++     G  ++   +K+R+ 
Sbjct: 223 GYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLA 282

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
               VG S+++ Y++ G++  A + F  +   ++  +N ++  YA      EA  + + +
Sbjct: 283 SINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI 342

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G  ++ +TF + L G S +     G QIH  I++S  + ++ I NALI MY +   +
Sbjct: 343 EGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNI 402

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + AF+VF  M D +VISW ++  GF+++    +    FHK + +G  PN VT+  +L  C
Sbjct: 403 EAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSAC 462

Query: 358 GKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             +  +  GL+  + + +  G +      + ++ +  R G +E A  + +++ +K     
Sbjct: 463 SHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFK----- 517

Query: 417 NELLSGYCFNCCDADVLKTF 436
                       DA VL+TF
Sbjct: 518 -----------ADALVLRTF 526



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 134/274 (48%), Gaps = 14/274 (5%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL    LG QV+  +VK+   +   + N+LI+MYS+CG      + FD + E+NLVS+  
Sbjct: 262 NLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNT 321

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           IV+A  ++   +   +++ +++  G   N F   S++    S+GA   G  IH   LK  
Sbjct: 322 IVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSG 381

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + N  +  ++++ Y++ G++ AA +VF  +   +V  W +MI G+A  G+   AL    
Sbjct: 382 FKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFH 441

Query: 236 SMLFEGITMDKYTFINALQGCSLVA-------DFDIGRQIHGLIIRSEVECSISIVNALI 288
            ML  G++ ++ T+I  L  CS V         F   +  HG++ R E    +      +
Sbjct: 442 KMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACV------V 495

Query: 289 DMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG 321
           D+  +S  ++ A ++   M  K D +   T  G 
Sbjct: 496 DLLGRSGHLEEAMELVNSMPFKADALVLRTFLGA 529



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 33/214 (15%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  I+K GF +++ + N LI+MYS+CG      +VF+EM + N++SWT +++   +
Sbjct: 370 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 429

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G     L+ +  M   G  PNE    +V+  C  +G    G   H  ++K+        
Sbjct: 430 HGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLK-HFKSMKV-------- 480

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
                    + G V   E   Y+   D +G            G+  EA+ +V+SM F+  
Sbjct: 481 ---------EHGIVPRMEH--YACVVDLLG----------RSGHLEEAMELVNSMPFKAD 519

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
            +   TF+ A   C +  + D+G+    +I+  +
Sbjct: 520 ALVLRTFLGA---CRVHGNMDLGKHAAEMILEQD 550



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           N  D++ ++ LI  YA++    EA+  F  M      P++  F  V  ACS+K  +  G 
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 672 LLFKSMDSQYGMQPSPDCYGC-LVDMLSR-NGYLEDAKHVIEIMP 714
           ++F  +  + G   S  C GC L+DM  + NG LE A  V + MP
Sbjct: 63  IIFGFL-LKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106


>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
 gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
          Length = 930

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 205/773 (26%), Positives = 376/773 (48%), Gaps = 62/773 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKS----RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           LR + + LA ++  S  L        LG  +HG  VK+G+ +   +   ++ MY + G  
Sbjct: 86  LRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSL 145

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF---MPNEFAVGSVM 152
                VFDEM+  + V   ++++A+ + G ++    ++  M  +G    MP    V  V+
Sbjct: 146 ADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVL 205

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA---AERVFYSISSD 209
            VC  +     G SIH + +K  +E +   G ++++ YAK G   A   A   F +I   
Sbjct: 206 PVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCK 265

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA-DFDIGRQI 268
           DV  WN++I GY+  G   EAL +   M+ E    +  T  N L  CSLV      G++I
Sbjct: 266 DVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEI 325

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG ++R  +E  IS+ NAL+  Y K   M     +F      D+++WNT+  G+  N+ P
Sbjct: 326 HGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYP 385

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSS 387
            +   LF   + +G  P+ V+   LL  C ++ +L +G+++      H   L E ++ ++
Sbjct: 386 SRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNA 445

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-----VLKTFCNIWES 442
           L+  + +C   + A   F  +  K+  +WN +LS     C +++       +    +W  
Sbjct: 446 LVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSA----CANSEHHIEQFFRLLGEMWHD 501

Query: 443 GVEVNGCTFFYVVE--TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL- 499
             + +  T   ++   T C     +MV + HG  ++ G++    + ++++ +Y   G L 
Sbjct: 502 VTQWDSVTILNIIRMSTFC---GIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLH 558

Query: 500 -------------------------------DNSFEFSNGAERLDMASWGAMMSALVHQG 528
                                          D    F++ AE+ D+ +W  M        
Sbjct: 559 DAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEK-DLTTWNLMSRLYAQND 617

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A  +FH L   G  PD   +  IL++C  + + Q  K  H ++++     ++++  
Sbjct: 618 LCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE-DIHLEG 676

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++DAY+KCG+I  A   F  S +  D++++  +I AYA HG+  +A+E+F KM   +++
Sbjct: 677 ALLDAYSKCGNIANAYNLFQVSLH-KDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIK 735

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-K 707
           P      +++SACSH GLVD G  +FKS+   YG++P+ +   C+VD+L+R+G L+DA  
Sbjct: 736 PDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYS 795

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +++ P   +   + SLL  C++HG  ++G+ A+++L  +  ++   +V++S
Sbjct: 796 FALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMS 848


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 191/637 (29%), Positives = 328/637 (51%), Gaps = 13/637 (2%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           HC A+K     + +   ++++ YAK G++  A ++F   S  D   WN MI G+ + G  
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             AL  + SM   G  +D Y+F + L+G + V   ++G+Q+H ++++   E ++   +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   ++ AF+VF+ +  ++ ++WN L  G+++  + G    L     L G   + 
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDD 201

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            TF+ LL          L  Q+    +  G   +  V +++I  +  CG++E A  VFD 
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 408 -VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  +++ TWN +L+ Y  N  + +  + F  +   G E +  T+  V+       +Q  
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQ 321

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
              +HG +IK G      I +SLI  Y+  +   +D +       E  D  SW ++++  
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G + +A+  F ++       D Y    +L SC+ +   Q  + +H  V+K GF    
Sbjct: 382 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNG 441

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +VAS++I  Y+KCG I+ AR +FD +   +  I +N+LI  YA HG    A+++F  MK 
Sbjct: 442 FVASSLIFMYSKCGVIEDARKSFDAT-PKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 500

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             ++    TFV+V++ACSH GLV++G    KSM+S YG+ P  + Y C++D+L R G L+
Sbjct: 501 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 560

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS---- 760
           +AK +IE MPF+P   V+++LL  CR  G+ EL    +  LL L P+    +VLLS    
Sbjct: 561 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFG 620

Query: 761 --KRKRQREG--NLLDHEGVCNVNDGIKTVDLKLELK 793
             +R  ++     L+   GV  V  G   +++K E++
Sbjct: 621 HLRRWNEKASIKRLMKERGVKKV-PGWSWIEVKNEVR 656



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/644 (24%), Positives = 298/644 (46%), Gaps = 10/644 (1%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGL 130
           +K G T  I+  NN+I+ Y+KCG      ++F E ++R+ VSW  +++  +  G F+  L
Sbjct: 26  IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           +    MK  GF  + ++ GS++K    +G  E G  +H   +K+  E N F G ++L+ Y
Sbjct: 86  EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK   V  A  VF SI+  +   WNA+I GYA  G    A  ++  M  EG+ +D  TF 
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE-RMAD 309
             L          +  Q+H  I++  +    ++ NA+I  Y +   ++ A +VF+  +  
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +D+++WN++   +  N    +   LF +  + G  P+  T++ ++    +      G  L
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSL 325

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEM--AHSVFDNVSYKNITTWNELLSGYCFNC 427
             L +  G      +++SLI M+ +  +  M  A ++F+++  K+  +WN +L+G+  + 
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              D LK F N+    V ++   F  V+ +C      Q+  Q+H  ++K+GF   G++ S
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVAS 445

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SLI  Y   G ++++ +  +   +    +W +++      G    A+ +F  + +   K 
Sbjct: 446 SLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 505

Query: 548 DEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           D      +L +C+ IG  +   S +       G    +   + +ID   + G +  A+  
Sbjct: 506 DHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL 565

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSH-K 664
            +      D +V+ TL+ A    G +  A ++     L  L+P +  T+V + S   H +
Sbjct: 566 IEAMPFEPDAMVWKTLLGACRTCGDIELASQV--ASHLLELEPEEHCTYVLLSSMFGHLR 623

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
              +K  +  K +  + G++  P      V    R+   ED  H
Sbjct: 624 RWNEKASI--KRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSH 665



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 231/521 (44%), Gaps = 38/521 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVH  +VK+G+  ++F  + L+ MY+KC        VF  +  RN V+W  ++S   
Sbjct: 118 VGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+      +   M+  G   ++     ++ +       +    +H   +K  +  +  
Sbjct: 178 QVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTT 237

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  +++  Y++ G +  AERVF  +I + D+  WN+M+  Y       EA  +   M   
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVL 297

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK--SSGMD 298
           G   D YT+ + +      +    G+ +HGL+I+  +E  + I N+LI MY+K  S  MD
Sbjct: 298 GFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMD 357

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +FE + +KD +SWN++  GFS++         F          +H  FS +LR C 
Sbjct: 358 EALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS 417

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG Q+  L L  GF     V SSLI+M+ +CG +E A   FD     +   WN 
Sbjct: 418 DLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNS 477

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           L+ GY  +      L  F  + +  V+++  TF  V+  C            H  +++ G
Sbjct: 478 LIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACS-----------HIGLVEEG 526

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           +        S +KS      +++ +          M  +  M+  L   G   EA     
Sbjct: 527 W--------SFLKS------MESDYGIPP-----RMEHYACMIDLLGRAGRLDEA----K 563

Query: 539 SLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +L+EA   +PD  +  T+L +C   G  +    +   +++L
Sbjct: 564 ALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLEL 604



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 3/183 (1%)

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           S ++  A  R    H   IK G    +Y A+ +I  YAKCG+I+ A   F ++ +  D +
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGET-SQRDAV 66

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +NT+I  + + G    A+E    MK         +F S++   +  G V+ G  +  SM
Sbjct: 67  SWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQV-HSM 125

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
             + G + +      L+DM ++   +EDA  V + +  + S T + +L+SG    G++  
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALISGYAQVGDRGT 184

Query: 738 GEW 740
             W
Sbjct: 185 AFW 187



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 11/191 (5%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L +  LG QVH  ++K GF  + F+ ++LI MYSKCG      + FD   + + ++W  
Sbjct: 418 DLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNS 477

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI-----HCF 170
           ++    Q+G   + L ++  MK      +     +V+  C  +G  E G+S        +
Sbjct: 478 LIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDY 537

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFE 229
            +  R+E      C +++   + G +  A+ +  ++    D   W  ++G    CG   E
Sbjct: 538 GIPPRMEH---YAC-MIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCG-DIE 592

Query: 230 ALNVVSSMLFE 240
             + V+S L E
Sbjct: 593 LASQVASHLLE 603


>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
 gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
          Length = 921

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 195/734 (26%), Positives = 349/734 (47%), Gaps = 16/734 (2%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S+  +  DPI  A  L+    L     G ++H  I   G  + + +   LI +Y K G+F
Sbjct: 193 SEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAM-VSTGLIDLYGKWGFF 251

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
              L+VF+ + +R++V WT  ++A + +G+    L+++  M+  G   N      ++  C
Sbjct: 252 EDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAAC 311

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            ++   E G +I      + +E +  +   +L+ +A+ G +     +F  +    V  W 
Sbjct: 312 SNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWT 371

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI  Y   GY  EAL +   M    I  D     N LQ CS + + + GR +H  I   
Sbjct: 372 TMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASR 428

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           + E S+ +   L+DMY+K   +  A + F+    +DVISW +L   +S      +   +F
Sbjct: 429 DFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVF 488

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           H   L G  PN +TF  ++  C +L  L  G  L    +  G + +E V ++L+ M+ + 
Sbjct: 489 HSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKF 548

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G V+ A  VFD++  K   +W  +L     N    + L+ +  I   G       F   +
Sbjct: 549 GRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAAL 608

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
            +C   E+      IHG I  + F     + + L+  Y   G+L+ +    +     +  
Sbjct: 609 VSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEV 668

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  M+      G   EA+ ++ ++     +P+      +++SCA +GA    + +H  +
Sbjct: 669 SWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHARL 725

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
              G      + +A+++ YAKCG +  AR  FD ++   D   +N++  AYA  G  S+ 
Sbjct: 726 SDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTY-CPDAGAWNSMATAYAQFGHGSQV 784

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +E++ +M L  +QP+  T +SV+ ACSH G++++    F+ M + +G+ P+ + Y C+ D
Sbjct: 785 LELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTD 844

Query: 696 MLSRNGYLEDAKHVIEIMPFQ-----PSP---TVYRSLLSGCRIHGNKELGEWASEKLLL 747
           +L R+G LE+A+ V+++   +      SP   + + S L  C+ H +      A+EKL  
Sbjct: 845 LLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYE 904

Query: 748 LLPKNDAAHVLLSK 761
           L P++ A +VLLS+
Sbjct: 905 LDPEDSAPYVLLSQ 918



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 308/632 (48%), Gaps = 10/632 (1%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D  LQN+L+ MY KCG      RVF  +  +N  SWT +++A  QNG     ++++ DM 
Sbjct: 133 DEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMM 192

Query: 138 TNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           + G + P+      V+  C ++G  E G  IH       +E +  V   +++ Y K G  
Sbjct: 193 SEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVE-SAMVSTGLIDLYGKWGFF 251

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A +VF S+   DV  W A I    + G    AL +   M  EG+  +  TF   L  C
Sbjct: 252 EDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAAC 311

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           S + DF+ G+ I   I    +E    + + ++ ++ +   +    ++F+RM  + V++W 
Sbjct: 312 SNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWT 371

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           T+   +++     +   L+H   +    P+ +  S +L+ C +L +L+ G  +       
Sbjct: 372 TMIAAYNQRGYSMEALELYHCMDI---EPDDIALSNVLQACSRLKNLEQGRAVHSRIASR 428

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
            F     V + L+ M+ +CG +  A   FD    +++ +W  L++ Y       + L+ F
Sbjct: 429 DFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVF 488

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            ++   GVE N  TF  V++ C R  +      +H  ++ TG  S  ++ ++L+  Y  F
Sbjct: 489 HSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKF 548

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G++D +    +        SW  M+ AL   GH+HEA+ ++  +   G +P   I    L
Sbjct: 549 GRVDFARVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAAL 608

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            SC A+    R ++IH  +    F  ++ +++ +++ YAKCG+++ AR+ FDQ    N+V
Sbjct: 609 VSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEV 668

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
             + T+I  YA +G  +EA+E++  M   ++QP+   FV V+S+C+  G + +G  +   
Sbjct: 669 -SWTTMIGGYAQNGRPAEALELYKAM---DVQPNFIAFVPVISSCADLGALVEGQRVHAR 724

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           + S  G+Q +      LV+M ++ G L  A+ 
Sbjct: 725 L-SDAGLQNNEVIVTALVNMYAKCGKLGLARE 755



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 175/672 (26%), Positives = 316/672 (47%), Gaps = 24/672 (3%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS    LK    G +VH  I +     D  LQN L+ +Y+KCG      R+F+ M  R +
Sbjct: 6   LSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTV 65

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-- 168
            +W  +++A +Q+  F   L+ +  M      P+     SV+  C S    E G +IH  
Sbjct: 66  ATWNTMITAYVQHDFFQEALEAFRRMDAP---PSSITFTSVLGACCSPDDLETGKAIHRQ 122

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A   +I+ +  +  S++  Y K G +  AERVF+ I   +   W AMI  YA  GY  
Sbjct: 123 IGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYER 182

Query: 229 EALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            A+ V   M+ EG +  D  T+   L  CS + D + G +IH LI    VE ++ +   L
Sbjct: 183 RAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAM-VSTGL 241

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ID+Y K    + A +VFE + D+DV+ W         +   G    LF K    G + N+
Sbjct: 242 IDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANN 301

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           VTFS +L  C  L D + G  ++      G   ++ +   ++ +  RCG++     +FD 
Sbjct: 302 VTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDR 361

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           + ++ + TW  +++ Y       + L+ +  +    +E +      V++ C R +N +  
Sbjct: 362 MPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQG 418

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             +H  I    F     + + L+  YV  G L  +    +G +  D+ SW ++++A  H+
Sbjct: 419 RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHE 478

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               EA+ +FHS+   G +P+     T++++C+ + +    +++H  V+  G  ++ +V 
Sbjct: 479 NFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVG 538

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A++  Y+K G +  AR+ FD S        +  +++A   +G   EA+E++ ++ L   
Sbjct: 539 NALVSMYSKFGRVDFARVVFD-SIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGF 597

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV------DMLSRNG 701
           +P    F + + +C+    V +   +       +G+  S D Y  LV      ++ ++ G
Sbjct: 598 RPGSPIFSAALVSCTALEDVSRARAI-------HGVIKSSDFYPDLVLSNVLMNVYAKCG 650

Query: 702 YLEDAKHVIEIM 713
            LE+A+ V + M
Sbjct: 651 ELEEARLVFDQM 662



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 220/467 (47%), Gaps = 12/467 (2%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF   L  C+ + D + G+++H  I  S       + NAL+++Y K   ++ + ++FE M
Sbjct: 1   TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG- 366
             + V +WNT+   + ++    +    F +     + P+ +TF+ +L  C    DL+ G 
Sbjct: 61  ERRTVATWNTMITAYVQHDFFQEALEAFRRM---DAPPSSITFTSVLGACCSPDDLETGK 117

Query: 367 -LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
            +  Q  A       +E + +SL+ M+ +CG++E A  VF  +  KN  +W  +++ Y  
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177

Query: 426 NCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           N  +   ++ F ++   G VE +  T+  V+  C    + +   +IH  I   G  S   
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVES-AM 236

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + + LI  Y  +G  +++ +        D+  W A ++A V+ G +  A+ +F  +   G
Sbjct: 237 VSTGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEG 296

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            + +      IL +C+ +  ++  K+I   +  LG   +  +   ++  +A+CG + G R
Sbjct: 297 LQANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTR 356

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD+      V+ + T+I AY   G   EA+E++  M   +++P      +V+ ACS  
Sbjct: 357 EMFDR-MPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRL 412

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             +++G  +   + S+   +PS      LVDM  + G L +A+   +
Sbjct: 413 KNLEQGRAVHSRIASR-DFEPSLMVQTLLVDMYVKCGDLAEARRTFD 458


>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
          Length = 1030

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 205/773 (26%), Positives = 376/773 (48%), Gaps = 62/773 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKS----RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           LR + + LA ++  S  L        LG  +HG  VK+G+ +   +   ++ MY + G  
Sbjct: 86  LRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSL 145

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF---MPNEFAVGSVM 152
                VFDEM+  + V   ++++A+ + G ++    ++  M  +G    MP    V  V+
Sbjct: 146 ADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVL 205

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA---AERVFYSISSD 209
            VC  +     G SIH + +K  +E +   G ++++ YAK G   A   A   F +I   
Sbjct: 206 PVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCK 265

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA-DFDIGRQI 268
           DV  WN++I GY+  G   EAL +   M+ E    +  T  N L  CSLV      G++I
Sbjct: 266 DVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEI 325

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG ++R  +E  IS+ NAL+  Y K   M     +F      D+++WNT+  G+  N+ P
Sbjct: 326 HGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYP 385

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSS 387
            +   LF   + +G  P+ V+   LL  C ++ +L +G+++      H   L E ++ ++
Sbjct: 386 SRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNA 445

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-----VLKTFCNIWES 442
           L+  + +C   + A   F  +  K+  +WN +LS     C +++       +    +W  
Sbjct: 446 LVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSA----CANSEHHIEQFFRLLGEMWHD 501

Query: 443 GVEVNGCTFFYVVE--TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL- 499
             + +  T   ++   T C     +MV + HG  ++ G++    + ++++ +Y   G L 
Sbjct: 502 VTQWDSVTILNIIRMSTFC---GIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLH 558

Query: 500 -------------------------------DNSFEFSNGAERLDMASWGAMMSALVHQG 528
                                          D    F++ AE+ D+ +W  M        
Sbjct: 559 DAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEK-DLTTWNLMSRLYAQND 617

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A  +FH L   G  PD   +  IL++C  + + Q  K  H ++++     ++++  
Sbjct: 618 LCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASLE-DIHLEG 676

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++DAY+KCG+I  A   F  S +  D++++  +I AYA HG+  +A+E+F KM   +++
Sbjct: 677 ALLDAYSKCGNIANAYNLFQVSLH-KDLVIFTAMIGAYAMHGMAEKAVELFSKMLTLDIK 735

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-K 707
           P      +++SACSH GLVD G  +FKS+   YG++P+ +   C+VD+L+R+G L+DA  
Sbjct: 736 PDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYS 795

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +++ P   +   + SLL  C++HG  ++G+ A+++L  +  ++   +V++S
Sbjct: 796 FALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMS 848


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  321 bits (823), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 192/701 (27%), Positives = 344/701 (49%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 69  GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVK 128

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  N   P+ F V +V K C ++  S FG  +H + +K  +E   
Sbjct: 129 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCV 188

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ + S M  E
Sbjct: 189 FVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKE 248

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   + T    L   + +   + G+Q H + I + +E    +  +L++ Y K   ++YA
Sbjct: 249 GVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYA 308

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+RM DKDV++WN L  G+ +         +     L   + + VT S L+    + 
Sbjct: 309 EMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAART 368

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L  G ++QC  +      +  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 369 ENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 428

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + L+ F  +    V  N  T+  ++ +  R+       ++   +  +G S
Sbjct: 429 AAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGIS 488

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                                           ++ SW  MM+ +V  G + EA+     +
Sbjct: 489 P-------------------------------NLISWTTMMNGMVQNGCSEEAILFLRKM 517

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++ A + +    +SIH ++I+ L  ++ V + ++++D YAKCGD
Sbjct: 518 QESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGD 577

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++   ++P   TF S++S
Sbjct: 578 INKAERVFGSKLYS-ELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLS 636

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+H G +D+   +F +M  ++GM P  + YG +VD+L+  G  E A  +IE MP++P  
Sbjct: 637 ACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDA 696

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL++ C      EL E+ S  LL   P+N   +V +S
Sbjct: 697 RMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTIS 737



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/490 (26%), Positives = 229/490 (46%), Gaps = 24/490 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL++V+ M F    +    +   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 33  EALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGDFYARNEYIETK 92

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G    L ++    
Sbjct: 93  LVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF-- 150

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              P++     + + CG L     G  +    +  G  D   V SSL  M+ +CG ++ A
Sbjct: 151 ---PDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDA 207

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN L+ GY  N  + + ++ F ++ + GVE    T      + C S
Sbjct: 208 RKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTV-----STCLS 262

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  MVG     Q H   I  G      + +SL+  Y   G ++ +    +     D+ +
Sbjct: 263 ASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVT 322

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG   +A+ +   +     K D   L T++++ A     +  K +  + I
Sbjct: 323 WNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCI 382

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +   +T++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL  EA+
Sbjct: 383 RHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVE-KDLILWNTLLAAYAQSGLSGEAL 441

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   +  +++ 
Sbjct: 442 RLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNG 500

Query: 697 LSRNGYLEDA 706
           + +NG  E+A
Sbjct: 501 MVQNGCSEEA 510



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/519 (21%), Positives = 210/519 (40%), Gaps = 71/519 (13%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +L+  Y K G   +   VFD 
Sbjct: 255 VTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDR 314

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M ++++V+W L++S  +Q G  +  + M   M+      +   + ++M         +FG
Sbjct: 315 MFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFG 374

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++  ++ +  +  + ++ YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 375 KEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQS 434

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                     LII S +      V
Sbjct: 435 GLSGEALRLFYEMQLESVPPNVITW--------------------NLIILSLLRN--GEV 472

Query: 285 NALIDMYI--KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           N   +M++  +SSG+             ++ISW T+  G  +N    +      K   SG
Sbjct: 473 NEAKEMFLQMQSSGI-----------SPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 521

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMA 401
            RPN  + ++ L     L  L  G  +    + +       ++ +SL+ M+ +CG +  A
Sbjct: 522 LRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKA 581

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VF +  Y  +  +N ++S Y       + +  + ++ + G++ +  TF  ++  C  +
Sbjct: 582 ERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHA 641

Query: 462 EN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
            +  Q VG     ++K G + C                               +  +G M
Sbjct: 642 GDIDQAVGVFTAMVLKHGMTPC-------------------------------LEHYGLM 670

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +  L   G   +A+ +     E   KPD  ++ +++ SC
Sbjct: 671 VDLLASAGETEKAIRLIE---EMPYKPDARMIQSLVASC 706



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 142/343 (41%), Gaps = 72/343 (20%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + L+  +S +   ++   G +V  + ++     DI L +  + MY+KCG      
Sbjct: 351 LKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAK 410

Query: 100 RVFDEMAER-----------------------------------NLVSWTLIVSAAIQNG 124
           +VFD   E+                                   N+++W LI+ + ++NG
Sbjct: 411 KVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 470

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---------------------- 162
           E +   +M++ M+++G  PN  +  ++M   V  G SE                      
Sbjct: 471 EVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSIT 530

Query: 163 -------------FGYSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
                        FG SIH + ++ +R   +  +  S+++ YAK GD+  AERVF S   
Sbjct: 531 VALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLY 590

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            ++  +NAMI  YA  G   EA+ +  S+   GI  D  TF + L  C+   D D    +
Sbjct: 591 SELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGV 650

Query: 269 -HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
              ++++  +   +     ++D+   +   + A ++ E M  K
Sbjct: 651 FTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYK 693



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS S NL S   G  +HG+I++ L  ++ + ++ +L+ MY+KCG  
Sbjct: 519 ESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDI 578

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               RVF       L  +  ++SA    G     + +Y  ++  G  P+     S++  C
Sbjct: 579 NKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSAC 638

Query: 156 VSMG 159
              G
Sbjct: 639 NHAG 642


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/615 (29%), Positives = 320/615 (52%), Gaps = 6/615 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISS 208
           V++ C   G+     ++H   LK   E    +       + Y+K  +  AA  VF  +  
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W  MI G    G  F+       ML  GI  DK+ +   +Q C  +   ++G+ +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  I+       I +  +L++MY K   ++ ++ VF  M + + +SWN +  G + N   
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   LF +       PN  T   + +  GKL+D+++G ++Q  A   G      V ++L
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363

Query: 389 IYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           I M+ +CG++  A SVFD   ++    T WN ++SGY  + C  + L+ +  + ++G+  
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 423

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFEF 505
           +  T+  V      S++ Q    +HG ++K G       + +++  +Y   G L++  + 
Sbjct: 424 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 483

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +  E  D+ SW  +++A        EA+  F  + E G  P+++   ++L SCA++   
Sbjct: 484 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 543

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +  + +H  + K G +TE  + SA+ID YAKCG I  A   FD+  N  D++ +  +I  
Sbjct: 544 EYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP-DIVSWTAIISG 602

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           YA HGLV +A+++F +M+L+ ++ +  T + V+ ACSH G+V++G   F+ M+  YG+ P
Sbjct: 603 YAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVP 662

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
             + Y C++D+L R G L+DA   I  MP +P+  V+++LL GCR+HGN ELGE A+ K+
Sbjct: 663 EMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKI 722

Query: 746 LLLLPKNDAAHVLLS 760
           L + P+  A +VLLS
Sbjct: 723 LSIRPEYSATYVLLS 737



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 221/467 (47%), Gaps = 32/467 (6%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG  VH  IV  GF   IF+  +L+ MY+K G       VF+ M E N VSW  +
Sbjct: 234 LDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAM 293

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S    NG       ++V MK     PN + + SV K    +     G  +   A ++ I
Sbjct: 294 ISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI 353

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-----WNAMIGGYAHCGYGFEAL 231
           E N  VG ++++ Y+K G +  A  VF    ++ + C     WNAMI GY+  G   EAL
Sbjct: 354 EGNVLVGTALIDMYSKCGSLHDARSVF---DTNFINCGVNTPWNAMISGYSQSGCSQEAL 410

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDM 290
            +   M   GIT D YT+ +     +       GR +HG++++  ++   +S+ NA+ D 
Sbjct: 411 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 470

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   ++   KVF+RM ++D++SW TL   +S++    +  + F      G  PN  TF
Sbjct: 471 YSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTF 530

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S +L  C  L  L+ G Q+  L    G   E+ + S+LI M+ +CG++  A  VFD +S 
Sbjct: 531 SSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN 590

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            +I +W  ++SGY  +    D L+ F  +  SG++ N  T   V+  C            
Sbjct: 591 PDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS----------- 639

Query: 471 HGAIIKTGF-----SSCGYICSSLIKSYV-------NFGQLDNSFEF 505
           HG +++ G         GY     ++ Y          G+LD++ EF
Sbjct: 640 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEF 686



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 291/633 (45%), Gaps = 18/633 (2%)

Query: 66  VHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           VHG ++K  F +   + L N+   +YSKC  F     VFDEM +RN+ SWT+++  + ++
Sbjct: 140 VHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEH 199

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G F  G K + +M  +G +P++FA  ++++ C+ + + E G  +H   +      + FV 
Sbjct: 200 GLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS 259

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+LN YAKLG +  +  VF  ++  +   WNAMI G    G   EA ++   M     T
Sbjct: 260 TSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACT 319

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + YT ++  +    + D ++G+++        +E ++ +  ALIDMY K   +  A  V
Sbjct: 320 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379

Query: 304 FERMADKDVIS------WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           F    D + I+      WN +  G+S++    +   L+ +   +G   +  T+  +    
Sbjct: 380 F----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAI 435

Query: 358 GKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
                L  G  +  + L CG  L   +V +++   + +CG +E    VFD +  ++I +W
Sbjct: 436 AASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSW 495

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             L++ Y  +    + L TFC + E G   N  TF  V+ +C      +   Q+HG + K
Sbjct: 496 TTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCK 555

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G  +   I S+LI  Y   G +  + +  +     D+ SW A++S     G   +A+ +
Sbjct: 556 AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQL 615

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK-SIHPFVIKLGFNTEVYVASAVIDAYA 595
           F  +  +G K +   L  +L +C+  G  +             G   E+   + +ID   
Sbjct: 616 FRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLG 675

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATF 654
           + G +  A     +     + +V+ TL+     HG V E  EI  + K+ +++P   AT+
Sbjct: 676 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV-ELGEIAAR-KILSIRPEYSATY 733

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           V + +     G  + G  L   M  Q G++  P
Sbjct: 734 VLLSNTYIETGSYEDGLSLRNVMKDQ-GVKKEP 765


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 190/702 (27%), Positives = 348/702 (49%), Gaps = 7/702 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I      +D+ +   ++  Y KCG+      VFD M++R++V W  +V   + 
Sbjct: 72  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPF 181
            G ++  + +  +M      PN   + +++  C        G  +H + L+  + + NP 
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++ FY +  D+     +F  +   ++  WNAMI GY   G  F+AL +   ML + 
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T + A+Q C+ +    +G+QIH L I+ E    + I+NAL++MY  +  ++ + 
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++FE + ++D   WN++   ++      +   LF +    G + +  T  I+L  C +L 
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 362 D-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G  L    +  G   + ++ ++L+ M+     VE    +FD +   +I +WN ++
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 430

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
                N   A   + F  + ES ++ N  T   ++  C           IHG ++K    
Sbjct: 431 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 490

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L   Y+N G    + +   G    D+ SW AM+++ V     H+A+ +FH +
Sbjct: 491 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM 550

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT--EVYVASAVIDAYAKCG 598
           +   E P+   +  +L+S   +    + +S+H +V + GF+   ++ +A+A I  YA+CG
Sbjct: 551 ISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCG 609

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A   F ++    ++I +N +I  Y  +G  S+AM  F +M     +P+  TFVSV+
Sbjct: 610 SLQSAENIF-KTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVL 668

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH G ++ G  LF SM   + + P    Y C+VD+L+R G +++A+  I+ MP +P 
Sbjct: 669 SACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPD 728

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +V+R+LLS CR + + +  +   EKL  L P N   +VLLS
Sbjct: 729 ASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLS 770



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/588 (25%), Positives = 292/588 (49%), Gaps = 6/588 (1%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L  Y  M++ G +PN   +  V+K C +  A E G SIH       +  +  VG +V++F
Sbjct: 38  LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDF 97

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G V  A  VF ++S  DV  WNAM+ GY   G   EA+ +V  M  E +  +  T 
Sbjct: 98  YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 157

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +  L  C   ++  +GR +HG  +R+ + + +  +  ALI  Y++   M     +F+ M 
Sbjct: 158 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMV 216

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++++SWN +  G+ +  +  +   LF + ++   + + VT  + ++ C +L  L LG Q
Sbjct: 217 VRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQ 276

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  LA+   F+++  + ++L+ M+   G++E +H +F++V  ++   WN ++S Y    C
Sbjct: 277 IHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGC 336

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICS 487
             + +  F  +   GV+ +  T   ++  C    +  + G+ +H  +IK+G      + +
Sbjct: 337 HEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGN 396

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  Y     +++  +  +  + +D+ SW  M+ AL       +A  +F  + E+  KP
Sbjct: 397 ALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKP 456

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           + Y + +IL +C  +      +SIH +V+K        + +A+ D Y  CGD   AR  F
Sbjct: 457 NSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLF 516

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     D+I +N +I +Y  +    +A+ +F +M ++  +P+  T ++V+S+ +H   +
Sbjct: 517 -EGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATL 574

Query: 668 DKGCLLFKSMDSQ-YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            +G  L   +  + + +          + M +R G L+ A+++ + +P
Sbjct: 575 PQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 622



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 253/549 (46%), Gaps = 13/549 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG Q+H   +K  F  D+++ N L+ MYS  G      ++F+ +  R+   W  +
Sbjct: 268 LGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSM 327

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF-GYSIHCFALKIR 175
           +SA    G  +  + +++ M++ G   +E  V  ++ +C  + +    G S+H   +K  
Sbjct: 328 ISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSG 387

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  +  +G ++L+ Y +L  V + +++F  +   D+  WN MI   A      +A  +  
Sbjct: 388 MRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 447

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M    I  + YT I+ L  C  V   D GR IHG +++  +E +  +  AL DMY+   
Sbjct: 448 RMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCG 507

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A  +FE   D+D+ISWN +   + +N    +   LFH+ I S + PN VT   +L 
Sbjct: 508 DEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLS 566

Query: 356 QCGKLLDLDLGLQLQCLALHCGF---LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
               L  L  G  L       GF   LD  ++ ++ I M+ RCG+++ A ++F  +  +N
Sbjct: 567 SFTHLATLPQGQSLHAYVTRRGFSLGLD-LSLANAFITMYARCGSLQSAENIFKTLPKRN 625

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I +WN +++GY  N   +D +  F  + E G   NG TF  V+  C  S   +M  Q+  
Sbjct: 626 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 685

Query: 473 AIIKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGH 529
           ++++  F+    +   S ++      G +D + EF +      D + W A++S+      
Sbjct: 686 SMVQD-FNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSD 744

Query: 530 NHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             +A TIF  L +        Y+L  + N  A  G +   + I  ++ + G      ++ 
Sbjct: 745 AKQAKTIFEKLDKLEPMNAGNYVL--LSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISW 802

Query: 589 AVIDAYAKC 597
            ++     C
Sbjct: 803 IIVKNQVHC 811



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 229/484 (47%), Gaps = 11/484 (2%)

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           I   D   WN++I   A+       L+  + M   G+  +  T    L+ C+     + G
Sbjct: 13  IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 72

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           + IH  I  +++   + +  A++D Y K   ++ A  VF+ M+D+DV+ WN +  G+   
Sbjct: 73  KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 132

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE-ENV 384
               +   L  +      RPN  T   LL  C    +L LG  +    L  G  D   +V
Sbjct: 133 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV 192

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA-DVLKTFCNIWESG 443
            ++LI  + R   + +   +FD +  +NI +WN ++SGY ++  D    L+ F  +    
Sbjct: 193 ATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGY-YDVGDYFKALELFVQMLVDE 250

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           V+ +  T    V+ C    + ++  QIH   IK  F    YI ++L+  Y N G L++S 
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +        D   W +M+SA    G + EA+ +F  +   G K DE  +  +L+ C  + 
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 564 A-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           +   + KS+H  VIK G   +  + +A++  Y +   ++  +  FD+     D+I +NT+
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDR-MKGVDIISWNTM 429

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I+A A + L ++A E+F++M+ + ++P+  T +S+++AC      D  CL F      Y 
Sbjct: 430 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACE-----DVTCLDFGRSIHGYV 484

Query: 683 MQPS 686
           M+ S
Sbjct: 485 MKHS 488



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 190/408 (46%), Gaps = 9/408 (2%)

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           KD   WN++    +  KN     S + +    G  PN+ T  ++L+ C     ++ G  +
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
                    +D+  V ++++  +C+CG VE A  VFD +S +++  WN ++ GY    C 
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSS 488
            + +     +    +  N  T   ++  C  +   ++   +HG  ++ G F S  ++ ++
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           LI  Y+ F        F     R ++ SW AM+S     G   +A+ +F  ++    K D
Sbjct: 196 LIGFYLRFDMRVLPLLFDLMVVR-NIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFD 254

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
              +   + +CA +G+ +  K IH   IK  F  ++Y+ +A+++ Y+  G ++ +   F 
Sbjct: 255 CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF- 313

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +S  + D  ++N++I AYA  G   EAM++F +M+   ++  + T V ++S C     + 
Sbjct: 314 ESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE---LA 370

Query: 669 KGCLLFKSMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            G L  KS+ +   + GM+        L+ M +    +E  + + + M
Sbjct: 371 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRM 418



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/306 (21%), Positives = 139/306 (45%), Gaps = 5/306 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++ +   +   L+  E++     G  +HG+++K     +  L+  L  MY  CG   
Sbjct: 451 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 510

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F+   +R+L+SW  ++++ ++N +    L ++  M +    PN   + +V+    
Sbjct: 511 TARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFT 569

Query: 157 SMGASEFGYSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            +     G S+H +  +    +  +  +  + +  YA+ G + +AE +F ++   ++  W
Sbjct: 570 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISW 629

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLII 273
           NAMI GY   G G +A+   S ML +G   +  TF++ L  CS     ++G Q+ H ++ 
Sbjct: 630 NAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQ 689

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTA 332
              V   +   + ++D+  +   +D A +  + M  + D   W  L        +  Q  
Sbjct: 690 DFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAK 749

Query: 333 SLFHKF 338
           ++F K 
Sbjct: 750 TIFEKL 755


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/626 (29%), Positives = 330/626 (52%), Gaps = 3/626 (0%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+  G   + F    V+K C  +     G  IH   +K   +   FV  S+++ YAK  D
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 196 VAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +  A ++F  ++  +DV  WN++I  Y+  G   EAL +   M   G+  + YT + ALQ
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
            C   +   +G +IH  I++S     + + NAL+ M+++   M YA ++F+ + +KD I+
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN++  GF++N    +    F     +  +P+ V+   +L   G+L  L  G ++   A+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
                    + ++LI M+ +C  V  A  VFD +  K++ +W  +++ Y  N C  + LK
Sbjct: 241 KNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALK 300

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
               +   G++V+       +  C          ++HG  +K G S    + + +I  Y 
Sbjct: 301 LLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDL-MMQNMIIDVYA 359

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           + G ++ +       +  D+ SW +M+S  VH G  +EA+ +F+ + E   +PD   L +
Sbjct: 360 DCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVS 419

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           IL++ A++ A  + K IH F+ + GF  E    ++++D YA CG ++ A   F  +  S 
Sbjct: 420 ILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICT-RSK 478

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            ++++ T+I AY  HG    A+E+F  M+   L P   TF++++ ACSH GL+++G  L 
Sbjct: 479 SLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLL 538

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           ++M  +Y ++P P+ Y CLVD+L R  +LE+A H ++ M  +P+  V+ + L  CRIH N
Sbjct: 539 ETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSN 598

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLS 760
           K+LGE A++KLL L P +  ++VL+S
Sbjct: 599 KKLGEIAAQKLLDLDPDSPGSYVLIS 624



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 238/510 (46%), Gaps = 2/510 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN-LVSWTLIVSAAI 121
           G ++HG I+K G+ + +F+ N+L++MY+KC       ++FD M ERN +VSW  I+SA  
Sbjct: 29  GAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERNDVVSWNSIISAYS 88

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG+    L ++ +M+  G   N + + + ++ C      + G  IH   LK     + +
Sbjct: 89  LNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVY 148

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++  + + G ++ A R+F  +   D   WN+MI G+   G   EAL     +    
Sbjct: 149 VANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDAN 208

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ + I+ L     +     G++IH   +++ ++ ++ I N LIDMY K   + YA 
Sbjct: 209 LKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAG 268

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF++M +KD+ISW T+   +++N    +   L  K    G   + +     L  C  L 
Sbjct: 269 LVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLR 328

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L    ++    L  G L +  + + +I ++  CG +  A  +F+++  K++ +W  ++S
Sbjct: 329 CLSHAKEVHGYTLKRG-LSDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMIS 387

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  N    + L  F  + E+ VE +  T   ++             +IHG I + GF  
Sbjct: 388 CYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFML 447

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            G   +SL+  Y   G L+N+++         +  W  M++A    G    AV +F  + 
Sbjct: 448 EGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIME 507

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
           +    PD      +L +C+  G     K +
Sbjct: 508 DQKLIPDHITFLALLYACSHSGLINEGKRL 537



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 205/415 (49%), Gaps = 1/415 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  +L   E+   + LG ++H  I+K     D+++ N L+AM+ + G   +  R+FDE+ 
Sbjct: 115 LVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELD 174

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E++ ++W  +++   QNG ++  L+ +  ++     P+E ++ S++     +G    G  
Sbjct: 175 EKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH +A+K  ++ N  +G ++++ Y+K   VA A  VF  + + D+  W  +I  YA    
Sbjct: 235 IHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNC 294

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL ++  +  +G+ +D     + L  CS +      +++HG  ++  +   + + N 
Sbjct: 295 HTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNM 353

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           +ID+Y     ++YA ++FE +  KDV+SW ++   +  N    +   +F+    +   P+
Sbjct: 354 IIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPD 413

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +T   +L     L  L+ G ++       GF+ E +  +SL+ M+  CG++E A+ VF 
Sbjct: 414 SITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFI 473

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
               K++  W  +++ Y  +      ++ F  + +  +  +  TF  ++  C  S
Sbjct: 474 CTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 3/326 (0%)

Query: 34  FC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC   D+ L+ D + L   L+ S  L   + G ++H + +K    +++ + N LI MYSK
Sbjct: 201 FCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSK 260

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C    +   VFD+M  ++L+SWT +++A  QN      LK+   ++T G   +   +GS 
Sbjct: 261 CCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGST 320

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +        +H + LK R   +  +   +++ YA  G++  A R+F SI   DV
Sbjct: 321 LLACSGLRCLSHAKEVHGYTLK-RGLSDLMMQNMIIDVYADCGNINYATRMFESIKCKDV 379

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W +MI  Y H G   EAL V   M    +  D  T ++ L   + ++  + G++IHG 
Sbjct: 380 VSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGF 439

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I R       S VN+L+DMY     ++ A+KVF     K ++ W T+   +  +      
Sbjct: 440 IFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAA 499

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQC 357
             LF         P+H+TF  LL  C
Sbjct: 500 VELFSIMEDQKLIPDHITFLALLYAC 525


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/615 (29%), Positives = 320/615 (52%), Gaps = 6/615 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISS 208
           V++ C   G+     ++H   LK   E    +       + Y+K  +  AA  VF  +  
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W  MI G    G  F+       ML  GI  DK+ +   +Q C  +   ++G+ +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  I+       I +  +L++MY K   ++ ++ VF  M + + +SWN +  G + N   
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   LF +       PN  T   + +  GKL+D+++G ++Q  A   G      V ++L
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309

Query: 389 IYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           I M+ +CG++  A SVFD   ++    T WN ++SGY  + C  + L+ +  + ++G+  
Sbjct: 310 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 369

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFEF 505
           +  T+  V      S++ Q    +HG ++K G       + +++  +Y   G L++  + 
Sbjct: 370 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 429

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +  E  D+ SW  +++A        EA+  F  + E G  P+++   ++L SCA++   
Sbjct: 430 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 489

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +  + +H  + K G +TE  + SA+ID YAKCG I  A   FD+  N  D++ +  +I  
Sbjct: 490 EYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP-DIVSWTAIISG 548

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           YA HGLV +A+++F +M+L+ ++ +  T + V+ ACSH G+V++G   F+ M+  YG+ P
Sbjct: 549 YAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVP 608

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
             + Y C++D+L R G L+DA   I  MP +P+  V+++LL GCR+HGN ELGE A+ K+
Sbjct: 609 EMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKI 668

Query: 746 LLLLPKNDAAHVLLS 760
           L + P+  A +VLLS
Sbjct: 669 LSIRPEYSATYVLLS 683



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 221/467 (47%), Gaps = 32/467 (6%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG  VH  IV  GF   IF+  +L+ MY+K G       VF+ M E N VSW  +
Sbjct: 180 LDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAM 239

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S    NG       ++V MK     PN + + SV K    +     G  +   A ++ I
Sbjct: 240 ISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI 299

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-----WNAMIGGYAHCGYGFEAL 231
           E N  VG ++++ Y+K G +  A  VF    ++ + C     WNAMI GY+  G   EAL
Sbjct: 300 EGNVLVGTALIDMYSKCGSLHDARSVF---DTNFINCGVNTPWNAMISGYSQSGCSQEAL 356

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDM 290
            +   M   GIT D YT+ +     +       GR +HG++++  ++   +S+ NA+ D 
Sbjct: 357 ELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADA 416

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   ++   KVF+RM ++D++SW TL   +S++    +  + F      G  PN  TF
Sbjct: 417 YSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTF 476

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S +L  C  L  L+ G Q+  L    G   E+ + S+LI M+ +CG++  A  VFD +S 
Sbjct: 477 SSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN 536

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            +I +W  ++SGY  +    D L+ F  +  SG++ N  T   V+  C            
Sbjct: 537 PDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS----------- 585

Query: 471 HGAIIKTGF-----SSCGYICSSLIKSYV-------NFGQLDNSFEF 505
           HG +++ G         GY     ++ Y          G+LD++ EF
Sbjct: 586 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEF 632



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 162/633 (25%), Positives = 291/633 (45%), Gaps = 18/633 (2%)

Query: 66  VHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           VHG ++K  F +   + L N+   +YSKC  F     VFDEM +RN+ SWT+++  + ++
Sbjct: 86  VHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEH 145

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G F  G K + +M  +G +P++FA  ++++ C+ + + E G  +H   +      + FV 
Sbjct: 146 GLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVS 205

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+LN YAKLG +  +  VF  ++  +   WNAMI G    G   EA ++   M     T
Sbjct: 206 TSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACT 265

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + YT ++  +    + D ++G+++        +E ++ +  ALIDMY K   +  A  V
Sbjct: 266 PNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 325

Query: 304 FERMADKDVIS------WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           F    D + I+      WN +  G+S++    +   L+ +   +G   +  T+  +    
Sbjct: 326 F----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAI 381

Query: 358 GKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
                L  G  +  + L CG  L   +V +++   + +CG +E    VFD +  ++I +W
Sbjct: 382 AASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSW 441

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             L++ Y  +    + L TFC + E G   N  TF  V+ +C      +   Q+HG + K
Sbjct: 442 TTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCK 501

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G  +   I S+LI  Y   G +  + +  +     D+ SW A++S     G   +A+ +
Sbjct: 502 AGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQL 561

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK-SIHPFVIKLGFNTEVYVASAVIDAYA 595
           F  +  +G K +   L  +L +C+  G  +             G   E+   + +ID   
Sbjct: 562 FRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLG 621

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATF 654
           + G +  A     +     + +V+ TL+     HG V E  EI  + K+ +++P   AT+
Sbjct: 622 RVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNV-ELGEIAAR-KILSIRPEYSATY 679

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           V + +     G  + G  L   M  Q G++  P
Sbjct: 680 VLLSNTYIETGSYEDGLSLRNVMKDQ-GVKKEP 711


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 208/777 (26%), Positives = 374/777 (48%), Gaps = 58/777 (7%)

Query: 8   FLFADKPSCHFHATRK----------RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENL 57
           F  + KPS   H  +           R+  LC N +      L  +  F  ++L +   +
Sbjct: 15  FSVSSKPSSKQHDDQALNPSSTSYFHRVSSLCKNGEIKEALSLVTEMDF--RNLRIGPEI 72

Query: 58  KSRVL-----------GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
              +L           G Q+H  I+K G  +  + +++  L+  Y+KC        +F +
Sbjct: 73  YGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTK 132

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  RN+ SW  I+    + G  +  L  +V+M  N   P+ F V +V K C ++  S FG
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFG 192

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H + +K  +E   FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   
Sbjct: 193 RGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQN 252

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EA+ + S M  EG+   + T    L   + +   + G+Q H + I + +E    + 
Sbjct: 253 GMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILG 312

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            +L++ Y K   ++YA  VF+RM DKDV++WN +  G+ +         +     L   +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLK 372

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + VT + L+    +  +L LG ++QC  +   F  +  + S+++ M+ +CG++  A  V
Sbjct: 373 YDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD+ + K++  WN LL+ Y  +    + L+ F  +   GV  N  T+  ++ +  R+   
Sbjct: 433 FDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRN--- 489

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
              G++  A                 K    F Q+ +S  F N      + SW  MM+ +
Sbjct: 490 ---GEVDEA-----------------KDM--FLQMQSSGIFPN------LISWTTMMNGM 521

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTE 583
           V  G + EA+     + E+G +P+   +   L++CA + +    +SIH ++I+ L  ++ 
Sbjct: 522 VQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSS 581

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V + ++++D YAKCGDI  A   F     S ++ +YN +I AYA +G + EA+ ++  ++
Sbjct: 582 VSIETSLVDMYAKCGDINKAEKVFGSKLYS-ELPLYNAMISAYALYGNLKEAIALYRSLE 640

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              L+P   T  +V+SAC+H G  ++   +   M S++GM P  + YG +VD+L+  G  
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASAGQT 700

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + A  +IE MP++P   + +SL++ C      EL ++ S +L+   P N   +V +S
Sbjct: 701 DKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTIS 757


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/710 (27%), Positives = 342/710 (48%), Gaps = 13/710 (1%)

Query: 62  LGTQVHGHIVKLGFTN-----DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL---VSW 113
           LG ++H   V  G  +        LQ  L+ MY     F   + VF  +        + W
Sbjct: 54  LGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPW 113

Query: 114 TLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
             ++      G   + +  YV M    +   P+   +  V+K C ++GA   G  +H   
Sbjct: 114 NWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTT 173

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
             + ++++ +VG +++  YA  G +  A  VF  +   D   WN M+ GY   G    A+
Sbjct: 174 RALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAV 233

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +   M   G   +  T    L  C+  AD   G Q+H L ++  +E  +++ N L+ MY
Sbjct: 234 GLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMY 293

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ A+++F  M   D+++WN +  G  +N        LF     SG +P+ VT +
Sbjct: 294 AKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLA 353

Query: 352 ILLRQCGKLLDLDLGLQLQC-LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            LL    +L     G ++   +  +C  +D   + S+L+ ++ +C  V MA +VFD    
Sbjct: 354 SLLPALTELNGFKQGKEIHGYIVRNCAHVDV-FLVSALVDIYFKCRDVRMAQNVFDATKS 412

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            ++   + ++SGY  N      +K F  +   G++ N       +  C      ++  ++
Sbjct: 413 IDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQEL 472

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           HG ++K  +    Y+ S+L+  Y   G+LD S    +     D  +W +M+S+    G  
Sbjct: 473 HGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEP 532

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            EA+ +F  ++  G K +   + +IL++CA + A    K IH  +IK     +++  SA+
Sbjct: 533 EEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESAL 592

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y KCG+++ A   F+     N+V  +N++I AY  HGLV E++++   M+    +  
Sbjct: 593 IDMYGKCGNLELALRVFEHMPEKNEV-SWNSIISAYGAHGLVKESVDLLCCMQEEGFKAD 651

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF++++SAC+H G V +G  LF+ M  +Y ++P  +   C+VD+ SR G L+ A   I
Sbjct: 652 HVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFI 711

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             MPF+P   ++ +LL  CR+H N EL E AS++L  L P N   +VL+S
Sbjct: 712 ADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMS 761



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 241/492 (48%), Gaps = 18/492 (3%)

Query: 43  DPIF--LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           DP F  LA  LS+       + G Q+H   VK G   ++ + N L++MY+KC       R
Sbjct: 245 DPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWR 304

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F  M   +LV+W  ++S  +QNG  D  L+++ DM+ +G  P+   + S++     +  
Sbjct: 305 LFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNG 364

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  IH + ++     + F+  ++++ Y K  DV  A+ VF +  S DV   + MI G
Sbjct: 365 FKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISG 424

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y        A+ +   +L  GI  +     + L  C+ +A   IG+++HG ++++  E  
Sbjct: 425 YVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGR 484

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + +AL+DMY K   +D +  +F +M+ KD ++WN++   F++N  P +   LF + I+
Sbjct: 485 CYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIM 544

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G + N+VT S +L  C  L  +  G ++  + +      +    S+LI M+ +CG +E+
Sbjct: 545 EGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLEL 604

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF+++  KN  +WN ++S Y  +    + +   C + E G + +  TF  ++  C  
Sbjct: 605 ALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAH 664

Query: 461 SENQQ--------MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAER 511
           +   Q        M  + H   I+          S ++  Y   G+LD + +F ++   +
Sbjct: 665 AGQVQEGLRLFRCMTEEYH---IEPQVEH----LSCMVDLYSRAGKLDKAMQFIADMPFK 717

Query: 512 LDMASWGAMMSA 523
            D   WGA++ A
Sbjct: 718 PDAGIWGALLHA 729



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 188/391 (48%), Gaps = 4/391 (1%)

Query: 34  FC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC    S L+ D + LA  L     L     G ++HG+IV+     D+FL + L+ +Y K
Sbjct: 337 FCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFK 396

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        VFD     ++V  + ++S  + N   +  +KM+  +   G  PN   V S 
Sbjct: 397 CRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVAST 456

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C SM A   G  +H + LK   E   +V  ++++ Y+K G +  +  +F  +S+ D 
Sbjct: 457 LPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDE 516

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN+MI  +A  G   EAL++   M+ EG+  +  T  + L  C+ +     G++IHG+
Sbjct: 517 VTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGI 576

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           II+  +   +   +ALIDMY K   ++ A +VFE M +K+ +SWN++   +  +    ++
Sbjct: 577 IIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKES 636

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
             L       G + +HVTF  L+  C     +  GL+L +C+        +    S ++ 
Sbjct: 637 VDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVD 696

Query: 391 MFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           ++ R G ++ A     ++ +K +   W  LL
Sbjct: 697 LYSRAGKLDKAMQFIADMPFKPDAGIWGALL 727



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 227/504 (45%), Gaps = 21/504 (4%)

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEV-----ECSISIVNALIDMYIKSSGMDYAF 301
           Y  +  L+GC   +   +G +IH   + S +         ++   L+ MY+ +     A 
Sbjct: 37  YRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAV 96

Query: 302 KVF---ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL---SGSRPNHVTFSILLR 355
            VF    R A    + WN L  GF+   +  + A LF+  +    S  RP+  T   +++
Sbjct: 97  AVFSSLPRAAAAAALPWNWLIRGFTMAGH-HRLAVLFYVKMWAHPSSPRPDGHTLPYVVK 155

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L  L LG  +       G   +  V S+LI M+   G ++ A  VFD +  ++   
Sbjct: 156 SCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVL 215

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ GY      A  +  F  +  SG + N  T    +  C    +     Q+H   +
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G      + ++L+  Y     L+ ++       R D+ +W  M+S  V  G   +A+ 
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  + ++G +PD   L ++L +   +  +++ K IH ++++   + +V++ SA++D Y 
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYF 395

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC D++ A+  FD +  S DV++ +T+I  Y  + +   A+++F  +    ++P+     
Sbjct: 396 KCRDVRMAQNVFDAT-KSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVA 454

Query: 656 SVMSACSHKGLVDKGCLLFK-SMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEI 712
           S + AC+    +  G  L    + + Y  +    CY    L+DM S+ G L+ + ++   
Sbjct: 455 STLPACASMAAMRIGQELHGYVLKNAYEGR----CYVESALMDMYSKCGRLDLSHYMFSK 510

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKE 736
           M  +   T + S++S    +G  E
Sbjct: 511 MSAKDEVT-WNSMISSFAQNGEPE 533


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 209/757 (27%), Positives = 364/757 (48%), Gaps = 16/757 (2%)

Query: 12  DKPSCHFHATRKRIHRLCGNNQ--FCSDSFL--RKDPIFLAKSLSLSENLKSRVLGTQVH 67
           D  SC+   +  + HRL   +   F    FL    + I     +S    L++ +    V 
Sbjct: 114 DVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVC 173

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
            H +K+G+     +++ LI ++SK   F    +VF +    N+  W  I++ A++N  + 
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
               ++ +M      P+ +   SV+  C S+    FG  +    +K   E + FV  +++
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIV 292

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           + YAK G +A A  VF  I +  V  W  M+ GY      F AL +   M   G+ ++  
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T  + +  C   +      Q+H  + +S      S+  ALI MY KS  +D + +VFE +
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412

Query: 308 AD---KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD-L 363
            D   ++++  N +   FS++K PG+   LF + +  G R +  +   LL     +LD L
Sbjct: 413 DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCL 466

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           +LG Q+    L  G + +  V SSL  ++ +CG++E ++ +F  + +K+   W  ++SG+
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + +  F  + + G   +  T   V+  C    +     +IHG  ++ G     
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + S+L+  Y   G L  + +  +    LD  S  +++S     G   +   +F  +V +
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G   D + + +IL + A          +H ++ K+G  TE  V S+++  Y+K G I   
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AF Q  N  D+I +  LI +YA HG  +EA+++++ MK    +P + TFV V+SACSH
Sbjct: 707 CKAFSQ-INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++      SM   YG++P    Y C+VD L R+G L +A+  I  M  +P   V+ 
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ C+IHG  ELG+ A++K + L P +  A++ LS
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLS 862



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 304/637 (47%), Gaps = 23/637 (3%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+FL  +L++ YS  G      ++FD + + ++VS  +++S   Q+  F+  L+ +  M 
Sbjct: 83  DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             GF  NE + GSV+  C ++ A  F   + C  +K+       V  ++++ ++K     
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202

Query: 198 AAERVFYSISSDDVGCWNAMI-GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            A +VF    S +V CWN +I G   +  YG    ++   M       D YT+ + L  C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYG-AVFDLFHEMCVGFQKPDSYTYSSVLAAC 261

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + +     G+ +   +I+   E  + +  A++D+Y K   M  A +VF R+ +  V+SW 
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G++++ +      +F +   SG   N+ T + ++  CG+   +    Q+       
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCCDADVL 433
           GF  + +V ++LI M+ + G ++++  VF   D++  +NI   N +++ +  +      +
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438

Query: 434 KTFCNIWESGV---EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + F  + + G+   E + C+   V++         +  Q+HG  +K+G      + SSL 
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCL------NLGKQVHGYTLKSGLVLDLTVGSSLF 492

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G L+ S++   G    D A W +M+S     G+  EA+ +F  +++ G  PDE 
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            L  +L  C++  +  R K IH + ++ G +  + + SA+++ Y+KCG +K AR  +D+ 
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR- 611

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
               D +  ++LI  Y+ HGL+ +   +F  M ++          S++ A +   L D+ 
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA---LSDES 668

Query: 671 CL--LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L     +  ++ G+   P     L+ M S+ G ++D
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/660 (23%), Positives = 317/660 (48%), Gaps = 26/660 (3%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F + D    +  L+   +L+    G  V   ++K G   D+F+   ++ +Y+KCG+    
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + VF  +   ++VSWT+++S   ++ +    L+++ +M+ +G   N   V SV+  C   
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV---GCWN 215
                   +H +  K     +  V  ++++ Y+K GD+  +E+VF  +  DD+      N
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVN 422

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLI 272
            MI  ++      +A+ + + ML EG+  D+++       CSL++  D   +G+Q+HG  
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV------CSLLSVLDCLNLGKQVHGYT 476

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++S +   +++ ++L  +Y K   ++ ++K+F+ +  KD   W ++  GF+E     +  
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            LF + +  G+ P+  T + +L  C     L  G ++    L  G     ++ S+L+ M+
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +CG++++A  V+D +   +  + + L+SGY  +    D    F ++  SG  ++     
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN---SFEFSNGA 509
            +++    S+   +  Q+H  I K G  +   + SSL+  Y  FG +D+   +F   NG 
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ +W A++++    G  +EA+ +++ + E G KPD+     +L++C+  G  + + 
Sbjct: 717 ---DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773

Query: 570 -SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
             ++  V   G   E      ++DA  + G ++ A    +      D +V+ TL+ A   
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833

Query: 629 HGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           HG V E  ++  K K   L+PS A  ++S+ +  +  G  D+     K M    G+Q  P
Sbjct: 834 HGEV-ELGKVAAK-KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGT-GVQKEP 890



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/469 (21%), Positives = 203/469 (43%), Gaps = 11/469 (2%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q H L+ R  +   + +  +L+  Y  S  M  A K+F+ +   DV+S N +  G+ +++
Sbjct: 71  QAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              ++   F K    G   N +++  ++  C  L        + C  +  G+   E V S
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI +F +    E A+ VF +    N+  WN +++G   N     V   F  +     + 
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T+  V+  C   E  +    +   +IK G     ++C++++  Y   G +  + E  
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVF 308

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +      + SW  M+S          A+ IF  +  +G + +   + +++++C       
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
               +H +V K GF  +  VA+A+I  Y+K GDI  +   F+   +     + N +I ++
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA--CSHKGLVDKGCLLFKSMDSQYGMQ 684
           +      +A+ +F +M    L+  + +  S++S   C + G    G  L      + G+ 
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLV 482

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
                   L  + S+ G LE++  + + +PF+ +   + S++SG   +G
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 191/758 (25%), Positives = 357/758 (47%), Gaps = 46/758 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI- 121
           G   H  ++  GF    F+ N L+ MY++CG       VFD M  R+ VSW  +++A   
Sbjct: 23  GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82

Query: 122 ------------------------------QNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
                                         Q G F   + + V+M   G  P+   +  +
Sbjct: 83  AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C  +     G  IH  A+K  +E +   G ++++ Y K   +  A R F+ +   + 
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W A I G          L +   M   G+ + +  + +  + C+ +      RQ+H  
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAH 262

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            I+++      +  A++D+Y K+  +  A + F  + +  V + N +  G        + 
Sbjct: 263 AIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEA 322

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LF     SG   + V+ S +   C ++     GLQ+ CLA+  GF  +  V ++++ +
Sbjct: 323 LQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDL 382

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C A+  A+ VF  +  ++  +WN +++    N C  D +     +   G+E +  T+
Sbjct: 383 YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTY 442

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C   ++ +    +HG  IK+G     ++ S+++  Y   G +  + +  +    
Sbjct: 443 GSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG 502

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ SW +++S       + EA   F  +++ G KPD +   T+L++CA +   +  K I
Sbjct: 503 QELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQI 562

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  +IK     + Y++S ++D YAKCG++  + + F+++    D + +N +I  YA HG 
Sbjct: 563 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA-QKLDFVSWNAMICGYALHGQ 621

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+E+F++M+ AN+ P+ ATFV+V+ ACSH GL+D GC  F  M S+Y ++P  + + 
Sbjct: 622 GFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFA 681

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R+   ++A   I  MP +    ++++LLS C+I  + E+ E A+  +L L P 
Sbjct: 682 CMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPD 741

Query: 752 NDAAHVLLSK--------------RKRQREGNLLDHEG 775
           + + ++LLS               R+  R+G L    G
Sbjct: 742 DSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 779



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 254/521 (48%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA  L     L+   LG Q+H   VK G   D+   + L+ MY KC      LR F
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ERN VSW   ++  +QN ++  GL+++V M+  G   ++ A  SV + C ++    
Sbjct: 195 HGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLS 254

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               +H  A+K +   +  VG ++++ YAK   +  A R F+S+ +  V   NAM+ G  
Sbjct: 255 TARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLV 314

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G G EAL +   M   GI  D  +       C+ V  +  G Q+H L I+S  +  + 
Sbjct: 315 RTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVC 374

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++D+Y K   +  A+ VF+ M  +D +SWN +     +N+    T +  ++ +  G
Sbjct: 375 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYG 434

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+  T+  +L+ C  L  L+ G  +   A+  G   +  V+S+++ M+C+CG +  A 
Sbjct: 435 MEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQ 494

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            + D +  + + +WN ++SG+  N    +  K F  + + GV+ +  T+  V++TC    
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             ++  QIHG IIK       YI S+L+  Y   G + +S      A++LD  SW AM+ 
Sbjct: 555 TIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMIC 614

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                G   EA+ +F  + +A   P+      +L +C+ +G
Sbjct: 615 GYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVG 655



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 172/334 (51%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           QF + S +  D + L+   S    +K  + G QVH   +K GF  D+ ++N ++ +Y KC
Sbjct: 327 QFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKC 386

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   VF EM +R+ VSW  I++A  QN  ++  +    +M   G  P++F  GSV+
Sbjct: 387 KALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVL 446

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C  + + E+G  +H  A+K  +  + FV  +V++ Y K G +  A+++   I   ++ 
Sbjct: 447 KACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELV 506

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN++I G++      EA    S ML  G+  D +T+   L  C+ +A  ++G+QIHG I
Sbjct: 507 SWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQI 566

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+     I + L+DMY K   M  +  +FE+    D +SWN +  G++ +    +  
Sbjct: 567 IKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEAL 626

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
            +F +   +   PNH TF  +LR C  +  LD G
Sbjct: 627 EMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/619 (21%), Positives = 267/619 (43%), Gaps = 44/619 (7%)

Query: 153 KVCVSMGASEF--GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++C   G S    G + H   L        FV   +L  YA+ G  A A  VF  +   D
Sbjct: 10  QLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRD 69

Query: 211 VGCWNAMIGGYAHCGYG------FEAL---NVVS----------------------SMLF 239
              WN M+  YAH G        F A+   +VVS                       M  
Sbjct: 70  TVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMAR 129

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  D+ T    L+ C  + D  +G QIH + +++ +E  +   +AL+DMY K   ++ 
Sbjct: 130 RGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLED 189

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A + F  M +++ +SW     G  +N+   +   LF +    G   +   ++ + R C  
Sbjct: 190 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAA 249

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           +  L    QL   A+   F  +  V ++++ ++ +  ++  A   F ++    +   N +
Sbjct: 250 ITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAM 309

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           + G       A+ L+ F  +  SG+  +  +   V   C   +      Q+H   IK+GF
Sbjct: 310 MVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGF 369

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + ++++  Y     L  ++      E+ D  SW A+++AL       + +   + 
Sbjct: 370 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNE 429

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++  G +PD++  G++L +CA + + +    +H   IK G   + +V+S V+D Y KCG 
Sbjct: 430 MLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGM 489

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A+   D+     +++ +N++I  ++ +    EA + F +M    ++P   T+ +V+ 
Sbjct: 490 ITEAQKLHDR-IGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLD 548

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
            C++   ++ G  +   +  Q  M         LVDM ++ G + D+     ++ F+ + 
Sbjct: 549 TCANLATIELGKQIHGQIIKQE-MLGDEYISSTLVDMYAKCGNMPDS-----LLMFEKAQ 602

Query: 720 TV----YRSLLSGCRIHGN 734
            +    + +++ G  +HG 
Sbjct: 603 KLDFVSWNAMICGYALHGQ 621



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 149/365 (40%), Gaps = 38/365 (10%)

Query: 349 TFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           TFS L + C       L  G       L  GF+    V++ L+ M+ RCG    A  VFD
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 407 NVSYK-------------------------------NITTWNELLSGYCFNCCDADVLKT 435
            + ++                               ++ +WN LLSGYC      D +  
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +   GV  +  T   +++ C   E+  +  QIH   +KTG        S+L+  Y  
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGK 183

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
              L+++  F +G    +  SWGA ++  V        + +F  +   G    +    ++
Sbjct: 184 CRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASV 243

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
             SCAAI      + +H   IK  F+ +  V +A++D YAK   +  AR AF  S  ++ 
Sbjct: 244 FRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAF-FSLPNHT 302

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH-KGLVDK---GC 671
           V   N +++     GL +EA+++F  M  + +     +   V SAC+  KG +      C
Sbjct: 303 VQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHC 362

Query: 672 LLFKS 676
           L  KS
Sbjct: 363 LAIKS 367


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 341/700 (48%), Gaps = 3/700 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    + G   ++++   L+ +Y   G      R+F EM +RN+VSWT I+ A   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L  Y  M+  G M N  A+ +V+ +C ++     G  +    +   +  +  V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  +  L  V  AER+F  +   D   WNAMI  Y+H     +   V+S M    +
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T  + +  C+      +G  IH L + S + CS+ ++NAL++MY  +  +D A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLL 361
           +F  M+ +DVISWNT+   + ++ +  +      + + +    PN +TFS  L  C    
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G  +  + L     +   + +SL+ M+ +C ++E    VF+++   ++ + N L  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFS 480
           GY      A+ ++ F  +  +G++ N  T   +  TC    +    G  +H  + +TG  
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  YI +SLI  Y   G L++S    +      + SW A+++A V  G   EA+ +F   
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
             AG K D + L   L+S A + + +    +H   +K G + + +V +A +D Y KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
                      +      +NTLI  YA +G   EA + F  M     +P   TFV+++SA
Sbjct: 603 DCMLKTLPDPAH-RPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSA 661

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GL+DKG   + SM   +G+ P      C+VD+L R G   +A+  I+ MP  P+  
Sbjct: 662 CSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDL 721

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++RSLLS  R H N ++G  A++ LL L P +D+A+VLLS
Sbjct: 722 IWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLS 761



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 165/648 (25%), Positives = 283/648 (43%), Gaps = 28/648 (4%)

Query: 40  LRKDPIF-----LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +RK+ +      LA  +SL   L+  V G QV  H+V  G    + + N+LI M+     
Sbjct: 136 MRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRR 195

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                R+FD M ER+ +SW  ++S       +     +  DM+     P+   + S++ V
Sbjct: 196 VQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSV 255

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C S      G  IH   +   +  +  +  +++N Y+  G +  AE +F ++S  DV  W
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           N MI  Y       EAL  +  +L   EG   +  TF +AL  CS       GR IH +I
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPP-NSMTFSSALGACSSPEALMNGRTIHAMI 374

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++  ++  + I N+L+ MY K + M+   +VFE M   DV+S N L GG++  ++     
Sbjct: 375 LQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAM 434

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYM 391
            +F     +G +PN++T   L   C  L DL   G+ L       G L +E +T+SLI M
Sbjct: 435 RVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITM 494

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           +  CG +E +  +F  ++ K++ +WN +++    +    + +K F +   +G   N    
Sbjct: 495 YATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAG---NKLDR 551

Query: 452 FYVVETCCRSENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
           F + E    S N   +    Q+HG  +K G     ++ ++ +  Y   G++D   +    
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD 611

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
                   W  ++S     G+  EA   F  +V  G+KPD      +L++C+  G   + 
Sbjct: 612 PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671

Query: 569 KSIH-PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAY 626
              +       G +  +     ++D   + G    A    D+     ND+I  + L  + 
Sbjct: 672 MDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSR 731

Query: 627 AHHGL------VSEAMEI--FDK---MKLANLQPSQATFVSVMSACSH 663
            H  L          +E+  FD    + L+NL  + A +V V    SH
Sbjct: 732 THKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSH 779


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 204/700 (29%), Positives = 341/700 (48%), Gaps = 3/700 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    + G   ++++   L+ +Y   G      R+F EM +RN+VSWT I+ A   
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSS 122

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L  Y  M+  G M N  A+ +V+ +C ++     G  +    +   +  +  V
Sbjct: 123 NGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSV 182

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  +  L  V  AER+F  +   D   WNAMI  Y+H     +   V+S M    +
Sbjct: 183 ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T  + +  C+      +G  IH L + S + CS+ ++NAL++MY  +  +D A  
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLL 361
           +F  M+ +DVISWNT+   + ++ +  +      + + +    PN +TFS  L  C    
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G  +  + L     +   + +SL+ M+ +C ++E    VF+++   ++ + N L  
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFS 480
           GY      A+ ++ F  +  +G++ N  T   +  TC    +    G  +H  + +TG  
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  YI +SLI  Y   G L++S    +      + SW A+++A V  G   EA+ +F   
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDS 542

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
             AG K D + L   L+S A + + +    +H   +K G + + +V +A +D Y KCG +
Sbjct: 543 QHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKM 602

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
                      +      +NTLI  YA +G   EA + F  M     +P   TFV+++SA
Sbjct: 603 DCMLKTLPDPAH-RPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSA 661

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GL+DKG   + SM   +G+ P      C+VD+L R G   +A+  I+ MP  P+  
Sbjct: 662 CSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDL 721

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++RSLLS  R H N ++G  A++ LL L P +D+A+VLLS
Sbjct: 722 IWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLS 761



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 165/648 (25%), Positives = 283/648 (43%), Gaps = 28/648 (4%)

Query: 40  LRKDPIF-----LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           +RK+ +      LA  +SL   L+  V G QV  H+V  G    + + N+LI M+     
Sbjct: 136 MRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRR 195

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                R+FD M ER+ +SW  ++S       +     +  DM+     P+   + S++ V
Sbjct: 196 VQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSV 255

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C S      G  IH   +   +  +  +  +++N Y+  G +  AE +F ++S  DV  W
Sbjct: 256 CASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSRRDVISW 315

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           N MI  Y       EAL  +  +L   EG   +  TF +AL  CS       GR IH +I
Sbjct: 316 NTMISSYVQSNSCVEALETLGQLLQTDEGPP-NSMTFSSALGACSSPEALMNGRTIHAMI 374

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++  ++  + I N+L+ MY K + M+   +VFE M   DV+S N L GG++  ++     
Sbjct: 375 LQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAM 434

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYM 391
            +F     +G +PN++T   L   C  L DL   G+ L       G L +E +T+SLI M
Sbjct: 435 RVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITM 494

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           +  CG +E +  +F  ++ K++ +WN +++    +    + +K F +   +G   N    
Sbjct: 495 YATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAG---NKLDR 551

Query: 452 FYVVETCCRSENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
           F + E    S N   +    Q+HG  +K G     ++ ++ +  Y   G++D   +    
Sbjct: 552 FCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPD 611

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
                   W  ++S     G+  EA   F  +V  G+KPD      +L++C+  G   + 
Sbjct: 612 PAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671

Query: 569 KSIH-PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAY 626
              +       G +  +     ++D   + G    A    D+     ND+I  + L  + 
Sbjct: 672 MDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLSSSR 731

Query: 627 AHHGL------VSEAMEI--FDK---MKLANLQPSQATFVSVMSACSH 663
            H  L          +E+  FD    + L+NL  + A +V V    SH
Sbjct: 732 THKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSH 779


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 196/704 (27%), Positives = 343/704 (48%), Gaps = 7/704 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  +V  G T++I + N+L+ MY KC       +VFD M  R++VSWT +++   Q
Sbjct: 77  GRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQ 136

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG +   L+    M   G  PN+    +++ VC  +   + G  IH   +   +E +  +
Sbjct: 137 NGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGIL 196

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y   G     + VF  +    V  W  MI G +  G   E L V   M  EG+
Sbjct: 197 GNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGV 256

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ T+++ ++ C  +     G  I   I+ S    S  +  +LI +Y +   +D A  
Sbjct: 257 KANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKG 316

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           + E M  +DV++WN +    ++N +  +   L  +  + G   N VT+  +L  C  L  
Sbjct: 317 LLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEA 376

Query: 363 LDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           L  G ++    L CG L  E  V +S+I M+ +CG  E A SVF+ +  K+  +WN +++
Sbjct: 377 LSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVIN 436

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH-GAIIKTGFS 480
               N    D L+ F  +   G+  N  T   ++E C   E+ ++  QIH  A       
Sbjct: 437 ASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGG 496

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH--QGHNHEAVTIFH 538
           +   + +S++  Y   G L ++ +  +  E   + +W  +++A      G    A   F 
Sbjct: 497 NSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQ 556

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKC 597
            +   G KP E    + L++CAA+   +  +S+H      GF  T + + + +I+ Y KC
Sbjct: 557 EMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKC 616

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G    A++ FDQ      +I +N+LI+AYAH+G   EA+    +M L    P   T VS+
Sbjct: 617 GSPSDAKLVFDQ-MPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSI 675

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-Q 716
           +   SH GL+++G   F+S    +G++PS     CLVD+L+R G+L+ A+ +I   P  Q
Sbjct: 676 LYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQ 735

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
                + +LL+ C+ +G+ + G   +E++  L P++  + V+L+
Sbjct: 736 ADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLA 779



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 165/631 (26%), Positives = 296/631 (46%), Gaps = 5/631 (0%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY KC      L VFD ++ +N+ SWT++++A  QNG +   L+++  M+  G  P++  
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
               +  C + G  + G  IH   +   +  N  +  S++N Y K  DV  AE+VF  + 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             DV  W AM+  YA  G   +AL  +S M  EG+  ++ TF+  +  C+ +   D+GR+
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IH  II   +E    + NAL+ MY      D    VF RM    V+ W T+  G S+N  
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +   +F K  L G + N VT+  ++  C  L  +  G  +    L   F     + +S
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI ++ +CG ++ A  + +++  +++  WN +++    N  + + +     +   G   N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFS 506
             T+  V+E C   E      +IH  ++  G       + +S+I  Y   GQ + +    
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
               R D  SW A+++A V      +A+ +FH +   G + +E+ L ++L +C  +   +
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480

Query: 567 RTKSIH-PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
             + IH              V ++V++ YA+CG +  A+ AFD S     ++ ++ ++ A
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFD-SLEEKGLVAWSIILAA 539

Query: 626 YAHH--GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
           YA    G    A + F +M+   ++P + TFVS + AC+    ++ G  + +   +   +
Sbjct: 540 YAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFV 599

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + S      +++M  + G   DAK V + MP
Sbjct: 600 ETSLVLGNTIINMYGKCGSPSDAKLVFDQMP 630



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/637 (24%), Positives = 280/637 (43%), Gaps = 13/637 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++H  I+  G   D  L N L+ MY  CG F     VF  M + +++ WT +++   
Sbjct: 177 LGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCS 236

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG+++ GL ++  M   G   NE    S+++VC ++ A + G  I    L+     +  
Sbjct: 237 QNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL 296

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S+++ Y + G +  A+ +   +   DV  WNAM+   A  G  +EA++++  M  EG
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEG 356

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYA 300
              +K T+++ L+ C+ +     GR+IH  ++    ++  +++ N++I MY K    + A
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VFE M  KD +SWN +      N        LFH   L G R N  T   LL  CG L
Sbjct: 417 MSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGL 476

Query: 361 LDLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            DL L  Q+    A      +   V +S++ M+ RCG++  A   FD++  K +  W+ +
Sbjct: 477 EDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSII 536

Query: 420 LSGYC--FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           L+ Y    +       K F  +   G++    TF   ++ C      +    +H     +
Sbjct: 537 LAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAAS 596

Query: 478 GFSSCGYIC-SSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           GF     +  +++I  Y   G   D    F    E+  + SW +++ A  H GH  EA++
Sbjct: 597 GFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKC-LISWNSLIVAYAHNGHALEALS 655

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAY 594
               ++  G  PD     +IL   +  G  +R  +     +   G          ++D  
Sbjct: 656 SLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLL 715

Query: 595 AKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA- 652
           A+ G +  A  +         D I + TL+ A   +G     +   +  ++  L+P  + 
Sbjct: 716 ARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAE--RVFELEPQHSG 773

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +FV + +  +  G       + K M+ +  ++  P C
Sbjct: 774 SFVVLANLYASVGRWSDASRIRKMME-RMSVKKEPGC 809



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 184/376 (48%), Gaps = 5/376 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL +   G  +   I++  F +   L  +LI++Y +CG       + + M +R++V+W  
Sbjct: 272 NLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNA 331

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI- 174
           +V+A  QNG+    + +   M   GF  N+    SV++ C ++ A   G  IH   L   
Sbjct: 332 MVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCG 391

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            +++   VG SV+  Y K G   AA  VF ++   D   WNA+I          +AL + 
Sbjct: 392 LLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELF 451

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIK 293
             M  EG+  +++T ++ L+ C  + D  + RQIH           S ++ N++++MY +
Sbjct: 452 HGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYAR 511

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKN-PGQTA-SLFHKFILSGSRPNHVTFS 351
              +  A K F+ + +K +++W+ +   ++++K+ PG+ A   F +    G +P  VTF 
Sbjct: 512 CGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFV 571

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSY 410
             L  C  +  L+ G  +   A   GF++   V  +++I M+ +CG+   A  VFD +  
Sbjct: 572 SALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPE 631

Query: 411 KNITTWNELLSGYCFN 426
           K + +WN L+  Y  N
Sbjct: 632 KCLISWNSLIVAYAHN 647


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 211/734 (28%), Positives = 355/734 (48%), Gaps = 41/734 (5%)

Query: 28  LCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
           LCG+        LR D    A  L     ++    G  VHG +VK     D F++N L++
Sbjct: 50  LCGSG----GGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVS 105

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY  CG       VF  + + +LV W+ I+S  ++NG  + GL+++ DM + G  P+ FA
Sbjct: 106 MYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFA 165

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
              V+  C ++   +FG   HC+ +K+  +   ++  S+++FYAK GD+    RVF  +S
Sbjct: 166 FSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMS 225

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             ++  WN  I GY H  +  EAL +   ++ E    D ++ ++ L+  S +   D G++
Sbjct: 226 EKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKE 285

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IHG I+R+ +E +  +V++L+DMYI    +D+                        E+  
Sbjct: 286 IHGYILRAGIETNRYVVSSLLDMYIGC--IDH------------------------ESLY 319

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
           P     L     L G   +    + LL+ C     L+ G     L +      +  V SS
Sbjct: 320 PRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSS 379

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI M+ +CG  E A  VF  V   +   W+ L+SG+ +N C A+ LK F  +   G++ N
Sbjct: 380 LIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKAN 439

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C   EN +   ++H  I+++G+ S   + ++LI  Y    Q   + +  +
Sbjct: 440 EFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLCS 499

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP----DEYILGTILNSCAAIG 563
                ++ SW  ++ A +      E   I H L+   +      D      I  SC++  
Sbjct: 500 MIPDSEI-SWNFLIRACL----GAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPV 554

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
                   H ++ K G  +   +++++I  Y+ CG    A  AF+      D   + +++
Sbjct: 555 LLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNL-MPEKDTCSWTSIL 613

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            A   HG  SEA+ +  +M+  N    Q+TF SV++AC+  GLVD+   LF SM   YG+
Sbjct: 614 SARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGI 673

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           +P  + Y C+V++L R G  E+    I  +P F+  P ++R+LLS  RIHGN ++ ++A+
Sbjct: 674 EPLEEHYSCMVEVLGRAGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAA 733

Query: 743 EKLLLLLPKNDAAH 756
           EKLL L P + +A+
Sbjct: 734 EKLLELEPSDFSAN 747



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 169/657 (25%), Positives = 289/657 (43%), Gaps = 46/657 (7%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM---KTNGFM-P 143
           MY   G      ++FDEM ER+LVSWT+++S   ++G     L M+ DM      G + P
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           + F    V++ C  +    +G  +H   +K     + FV  ++++ Y   G +  A  VF
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             I   D+  W++++ GY   G   E L +   M+  GI  D + F   L  C+ +  +D
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWD 180

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G Q H  II+   +  + + N+L+D Y K   ++   +VF  M++K+++SWNT   G+ 
Sbjct: 181 FGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYV 240

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            N +  +   +F   +   S+ +  +   +L+    L  LD G ++    L  G      
Sbjct: 241 HNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRY 300

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V SSL+ M+  C   E   S++  V    +   N L  G         +LK +C++ ES 
Sbjct: 301 VVSSLLDMYIGCIDHE---SLYPRVEVP-LKLLNYLEGGGYDEFIMTSLLK-WCSL-ESS 354

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           +E +G  F                   H  IIK    S  Y+ SSLI  Y   G  + + 
Sbjct: 355 LE-SGKMF-------------------HSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAK 394

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                 E+ D A W A++S     G   EA+ +F  +   G K +E+   +++ +C A+ 
Sbjct: 395 RVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALE 454

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             ++ K +H  +++ G+ +   V + +I+ Y++    K A      S   +  I +N LI
Sbjct: 455 NLRKGKELHCKILRSGYESNFSVVNTLINLYSELWQHKQALKLC--SMIPDSEISWNFLI 512

Query: 624 MAYAHHGLVSEAMEIFDKM------KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            A     L +E  EI  K+         NL P  A    + ++CS   L++ G      M
Sbjct: 513 RA----CLGAEDYEIIHKLLWRIQVSHGNLDPVSAC--DIFASCSSPVLLNVGTQAHAYM 566

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            ++ G+   P     L+ M S  G  ++A     +MP +     + S+LS    HG+
Sbjct: 567 -TKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMP-EKDTCSWTSILSARVEHGH 621


>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 762

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 186/628 (29%), Positives = 325/628 (51%), Gaps = 8/628 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +V   + K+G   D      +I  Y   G     L +F +M   N+V+W +++S   Q G
Sbjct: 105 EVFEQMKKVGREPDQVAFVTVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRG 164

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++ +M+  G       +GSV+    S+   +FG  +H  A+K  ++ N +VG 
Sbjct: 165 HETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGS 224

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++N YAK  ++ AA++VF  I   +V  WNAM+GGYA  GY  E + ++S+M   G   
Sbjct: 225 SLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHP 284

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D++T+ + L  C+ +   + GRQ+H +II+++   ++ + NALIDMY KS  ++ A K F
Sbjct: 285 DEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQF 344

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E M  +D +SWN +  G+ + ++  +   +F K  L G  P+ V+ + +L  C  +   +
Sbjct: 345 ELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFE 404

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  + CL++  G        SSLI M+ +CG V  A  +  ++   ++ + N L++GY 
Sbjct: 405 QGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYA 464

Query: 425 -FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SC 482
             N  +A +L  F  +   G+  +  TF  +++ C   E   +  QIH  I+K G     
Sbjct: 465 PVNLEEAIIL--FEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDD 522

Query: 483 GYICSSLIKSYV-NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            ++  SL+  YV +  + D    FS  +       W AM+S L     + EA+  +  + 
Sbjct: 523 DFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMR 582

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
                PD+    ++L +CA + +    + IH  + + G + +    SA+ID YAKCGD++
Sbjct: 583 SCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVR 642

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            +   F+   + NDVI +N++I+ +A +G    A+ IF++MK A++ P   TF+ V++AC
Sbjct: 643 SSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTAC 702

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           SH G V +G  +F   D +     +P C
Sbjct: 703 SHAGRVSEGRQIF---DMKPSFVTAPAC 727



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/606 (27%), Positives = 281/606 (46%), Gaps = 47/606 (7%)

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
           M LK Y  + ++G  PNEF    V+  C  + + EFG  +HC  +K+  E + F   +++
Sbjct: 1   MVLKCYGLLWSHGMWPNEFTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALI 60

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           + YAK   ++   RVF    S D   W ++I GY   G   EAL V   M   G   D+ 
Sbjct: 61  DMYAKNNRMSDCRRVFDGGVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQV 120

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
            F                               ++++NA    Y+    +D A  +F +M
Sbjct: 121 AF-------------------------------VTVINA----YVALGRLDDALGLFFQM 145

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            + +V++WN +  G ++  +  ++  LF     +G +    T   +L     L DLD GL
Sbjct: 146 PNPNVVAWNVMISGHAQRGHETKSIELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGL 205

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +   A+  G      V SSLI M+ +C  +E A  VFD +  +N+  WN ++ GY  N 
Sbjct: 206 LVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNG 265

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              +V++   N+   G   +  T+  ++  C   E+ +   Q+H  IIK  F+S  ++ +
Sbjct: 266 YAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGN 325

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +LI  Y   G L+++ +     +  D  SW A++   V +    EA  +F  +   G  P
Sbjct: 326 ALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILP 385

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           DE  L +IL++CA +  +++ K IH   +K G  T +Y  S++ID YAKCGD+  A+   
Sbjct: 386 DEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKIL 445

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +S   + V+  N LI  YA   L  EA+ +F+KM+   L PS+ TF S++  C     +
Sbjct: 446 -KSMPEHSVVSINALIAGYAPVNL-EEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQL 503

Query: 668 DKG----CLLFKSMDSQYGMQPSPDCYGC-LVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
             G    CL+ K      G+Q   D  G  L+ M  ++    DA+ +        S  ++
Sbjct: 504 ILGIQIHCLILKR-----GLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILW 558

Query: 723 RSLLSG 728
            +++SG
Sbjct: 559 TAMISG 564



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 164/560 (29%), Positives = 266/560 (47%), Gaps = 9/560 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   +L     G  VH   +K G  +++++ ++LI MY+KC       +VFD + 
Sbjct: 188 LGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYAKCKELEAAKKVFDPID 247

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN+V W  +V    QNG     +++  +MK+ GF P+EF   S++  C  +   E G  
Sbjct: 248 ERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLEHVEGGRQ 307

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K +   N FVG ++++ YAK G +  A + F  + S D   WNA+I GY     
Sbjct: 308 LHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIVGYVQEED 367

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA  +   M   GI  D+ +  + L  C+ V  F+ G+ IH L ++S +E S+   ++
Sbjct: 368 EVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSS 427

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY K   +  A K+ + M +  V+S N L  G++   N  +   LF K    G  P+
Sbjct: 428 LIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAP-VNLEEAIILFEKMQAEGLNPS 486

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVF 405
            +TF+ LL  CG    L LG+Q+ CL L  G   D++ +  SL+ M+ +      A  +F
Sbjct: 487 EITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILF 546

Query: 406 DNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
              S  K+   W  ++SG   N C  + L+ +  +       +  TF  V+  C    + 
Sbjct: 547 SEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSI 606

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
               +IH  I +TG       CS+LI  Y   G + +S + F +   + D+ SW +M+  
Sbjct: 607 GDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVG 666

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               G+   A+ IF+ + +A   PD+     +L +C+  G     + I  F +K  F T 
Sbjct: 667 FAKNGYAENALRIFNEMKQAHVIPDDVTFLGVLTACSHAGRVSEGRQI--FDMKPSFVTA 724

Query: 584 ---VYVASAVIDAYAKCGDI 600
              +     +  AYAK  +I
Sbjct: 725 PACLVREEVLTKAYAKMVEI 744



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 165/691 (23%), Positives = 305/691 (44%), Gaps = 46/691 (6%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS    L S   G  VH ++VKLGF    F    LI MY+K        RVFD     + 
Sbjct: 25  LSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDGGVSLDT 84

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSWT +++  ++ G  +  L+++  MK  G  P++ A                       
Sbjct: 85  VSWTSLIAGYVKAGLPEEALEVFEQMKKVGREPDQVA----------------------- 121

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                     FV  +V+N Y  LG +  A  +F+ + + +V  WN MI G+A  G+  ++
Sbjct: 122 ----------FV--TVINAYVALGRLDDALGLFFQMPNPNVVAWNVMISGHAQRGHETKS 169

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +  +M   GI   + T  + L   + + D D G  +H   I+  ++ ++ + ++LI+M
Sbjct: 170 IELFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINM 229

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   ++ A KVF+ + +++V+ WN + GG+++N    +   L       G  P+  T+
Sbjct: 230 YAKCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTY 289

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L  ++ G QL  + +   F     V ++LI M+ + G +E A   F+ +  
Sbjct: 290 TSILSACACLEHVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKS 349

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++  +WN ++ GY     + +    F  +   G+  +  +   ++  C   E  +    I
Sbjct: 350 RDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGFEQGKPI 409

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H   +K+G  +  Y  SSLI  Y   G + ++ +         + S  A+++      + 
Sbjct: 410 HCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGYAPV-NL 468

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASA 589
            EA+ +F  +   G  P E    ++L+ C           IH  ++K G    + ++  +
Sbjct: 469 EEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQLILGIQIHCLILKRGLQYDDDFLGVS 528

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++  Y K      AR+ F +  N    I++  +I   A +    EA++ + +M+  N  P
Sbjct: 529 LLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISGLAQNNCSDEALQFYQEMRSCNALP 588

Query: 650 SQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            QATFVSV+ AC+    +  G     L+F++     G+         L+DM ++ G +  
Sbjct: 589 DQATFVSVLRACAVLSSIGDGREIHSLIFRT-----GLDLDESTCSALIDMYAKCGDVRS 643

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           +  V E M  +     + S++ G   +G  E
Sbjct: 644 SMQVFEDMHSKNDVISWNSMIVGFAKNGYAE 674



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 156/330 (47%), Gaps = 4/330 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + LA  LS   N++    G  +H   VK G    ++  ++LI MY+KCG  G   ++ 
Sbjct: 386 DEVSLASILSACANVEGFEQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKIL 445

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M E ++VS   ++ A       +  + ++  M+  G  P+E    S++  C       
Sbjct: 446 KSMPEHSVVSINALI-AGYAPVNLEEAIILFEKMQAEGLNPSEITFASLLDGCGGPEQLI 504

Query: 163 FGYSIHCFALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-WNAMIGG 220
            G  IHC  LK  ++  + F+G S+L  Y K      A  +F   S+      W AMI G
Sbjct: 505 LGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILWTAMISG 564

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A      EAL     M       D+ TF++ L+ C++++    GR+IH LI R+ ++  
Sbjct: 565 LAQNNCSDEALQFYQEMRSCNALPDQATFVSVLRACAVLSSIGDGREIHSLIFRTGLDLD 624

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFI 339
            S  +ALIDMY K   +  + +VFE M  K DVISWN++  GF++N        +F++  
Sbjct: 625 ESTCSALIDMYAKCGDVRSSMQVFEDMHSKNDVISWNSMIVGFAKNGYAENALRIFNEMK 684

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +   P+ VTF  +L  C     +  G Q+
Sbjct: 685 QAHVIPDDVTFLGVLTACSHAGRVSEGRQI 714


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 194/716 (27%), Positives = 365/716 (50%), Gaps = 6/716 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F++++LS S NL       ++H  ++ LG  +  F    LI  YS        L VF  +
Sbjct: 9   FISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65

Query: 106 AE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  +N+  W  I+ A  +NG F   L+ Y  ++ +   P+++   SV+K C  +  +E G
Sbjct: 66  SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             ++   L +  E + FVG ++++ Y+++G +  A +VF  +   D+  WN++I GY+  
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY  EAL +   +    I  D +T  + L     +     G+ +HG  ++S V   + + 
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N L+ MY+K      A +VF+ M  +D +S+NT+  G+ + +   ++  +F +  L   +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFK 304

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ +T S +LR CG L DL L   +    L  GF+ E  V + LI ++ +CG +  A  V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+++  K+  +WN ++SGY  +    + +K F  +     + +  T+  ++    R  + 
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +    +H   IK+G      + ++LI  Y   G++ +S +  +     D  +W  ++SA 
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           V  G     + +   + ++   PD       L  CA++ A +  K IH  +++ G+ +E+
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            + +A+I+ Y+KCG ++ +   F++  +  DV+ +  +I AY  +G   +A+E F  M+ 
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFER-MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           + + P    F++++ ACSH GLVD+G   F+ M + Y + P  + Y C+VD+LSR+  + 
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            A+  I+ MP +P  +++ S+L  CR  G+ E  E  S +++ L P +    +L S
Sbjct: 664 KAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 242/553 (43%), Gaps = 34/553 (6%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S++  D   ++  L    NL     G  +HG  +K G  + + + N L+AMY K     
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              RVFDEM  R+ VS+  ++   ++    +  ++M+++   + F P+   V SV++ C 
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +        I+ + LK        V   +++ YAK GD+  A  VF S+   D   WN+
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I GY   G   EA+ +   M+      D  T++  +   + +AD   G+ +H   I+S 
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTAS 333
           +   +S+ NALIDMY K   +  + K+F  M   D ++WNT+      F +     Q  +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
              K   S   P+  TF + L  C  L    LG ++ C  L  G+  E  + ++LI M+ 
Sbjct: 499 QMRK---SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG +E +  VF+ +S +++ TW  ++  Y         L+TF ++ +SG+  +   F  
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFS-----SCGYICSSLIKSYV-NFGQLDNSFEFSN 507
           ++  C            H  ++  G +        Y    +I+ Y      L  S + S 
Sbjct: 616 IIYACS-----------HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664

Query: 508 GAE-------RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG-EKPDEYILGTILNSC 559
             E       + D + W +++ A    G    A  +   ++E   + P   IL +  N+ 
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS--NAY 722

Query: 560 AAIGAYQRTKSIH 572
           AA+  + +   I 
Sbjct: 723 AALRKWDKVSLIR 735


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 206/745 (27%), Positives = 348/745 (46%), Gaps = 79/745 (10%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY----------------FGW---- 97
           K+ + G  VH  + +L   +D FL N+ I +YSKC +                F W    
Sbjct: 20  KAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAIL 79

Query: 98  -----------GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
                        R+F +M +RN VS   ++S  ++ G     L  Y  +  +G +P+  
Sbjct: 80  AAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHI 139

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
              +V   C S+  ++ G   H   +K+ +E N +V  ++L  YAK G  A A RVF  I
Sbjct: 140 TFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDI 199

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG- 265
              +   +  M+GG A      EA  +   ML +GI +D  +  + L  C+   + D+G 
Sbjct: 200 PEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCA-KGERDVGP 258

Query: 266 ----------RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
                     +Q+H L ++   E  + + N+L+DMY K   MD A KVF  +    V+SW
Sbjct: 259 CHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSW 318

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N +  G+    N  + A    +    G  P+ VT+  +L  C K  D+  G Q       
Sbjct: 319 NIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQ------- 371

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
                                       +FD +   ++T+WN +LSGY  N    + ++ 
Sbjct: 372 ----------------------------IFDCMPCPSLTSWNAILSGYNQNADHREAVEL 403

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +       +  T   ++ +C      +   ++H A  K GF    Y+ SSLI  Y  
Sbjct: 404 FRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSK 463

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G+++ S    +    LD+  W +M++         +A++ F  + + G  P E+   T+
Sbjct: 464 CGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATV 523

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           ++SCA + +  + +  H  ++K GF  +++V S++I+ Y KCGD+ GAR  FD     N 
Sbjct: 524 VSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRN- 582

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
            + +N +I  YA +G    A+ +++ M  +  +P   T+V+V++ACSH  LVD+G  +F 
Sbjct: 583 TVTWNEMIHGYAQNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFN 642

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           +M  +YG+ P    Y C++D LSR G   + + +++ MP +    V+  +LS CRIH N 
Sbjct: 643 AMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANL 702

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLS 760
            L + A+E+L  L P+N A++VLL+
Sbjct: 703 SLAKRAAEELYRLDPQNSASYVLLA 727



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/619 (24%), Positives = 281/619 (45%), Gaps = 47/619 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G + HG ++K+G  ++I++ N L+ MY+KCG     LRVF ++ E N V++T ++    Q
Sbjct: 157 GRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQ 216

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS----------MGASEFGYSIHCFAL 172
             +     +++  M   G   +  ++ S++ VC            +  +  G  +H  ++
Sbjct: 217 TNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSV 276

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           K+  E++  +  S+L+ YAK+GD+ +AE+VF +++   V  WN MI GY +     +A  
Sbjct: 277 KLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAE 336

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
            +  M  +G   D  T+IN L  C    D   GRQI                        
Sbjct: 337 YLQRMQSDGYEPDDVTYINMLTACVKSGDVRTGRQI------------------------ 372

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
                      F+ M    + SWN +  G+++N +  +   LF K       P+  T ++
Sbjct: 373 -----------FDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAV 421

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L  C +L  L+ G ++   +   GF D+  V SSLI ++ +CG +E++  VF  +   +
Sbjct: 422 ILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELD 481

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +  WN +L+G+  N    D L  F  + + G   +  +F  VV +C +  +     Q H 
Sbjct: 482 VVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHA 541

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            I+K GF    ++ SSLI+ Y   G ++ +  F +     +  +W  M+      G  H 
Sbjct: 542 QIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHN 601

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVI 591
           A+ +++ ++ +GEKPD+     +L +C+          I +  + K G   +V   + +I
Sbjct: 602 ALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCII 661

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D  ++ G      +  D     +D +V+  ++ +   H  +S A    +++   + Q S 
Sbjct: 662 DCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNS- 720

Query: 652 ATFVSVMSACSHKGLVDKG 670
           A++V + +  S  G  D  
Sbjct: 721 ASYVLLANMYSSLGKWDDA 739



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 2/279 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA  LS    L     G +VH    K GF +D+++ ++LI +YSKCG       VF
Sbjct: 415 DRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVF 474

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            ++ E ++V W  +++    N      L  +  M+  GF P+EF+  +V+  C  + +  
Sbjct: 475 SKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLF 534

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H   +K     + FVG S++  Y K GDV  A   F  +   +   WN MI GYA
Sbjct: 535 QGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYA 594

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSI 281
             G G  AL + + M+  G   D  T++  L  CS  A  D G +I + ++ +  V   +
Sbjct: 595 QNGDGHNALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKV 654

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF 319
           +    +ID   ++   +    + + M  K D + W  + 
Sbjct: 655 AHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVL 693



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 99/238 (41%), Gaps = 37/238 (15%)

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           EK     L  ++  C    A+   K +H  + +L   ++ ++++  I+ Y+KC  I  A 
Sbjct: 2   EKSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASAC 61

Query: 605 MAFDQ-------SFNS-----------------------NDVIVYNTLIMAYAHHGLVSE 634
             FD        S+N+                        + +  NTLI      G   +
Sbjct: 62  HVFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQ 121

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC-LLFKSMDSQYGMQPSPDCYGCL 693
           A++ +D + L  + PS  TF +V SAC    L+D  C      +  + G++ +      L
Sbjct: 122 ALDTYDSVMLDGVIPSHITFATVFSACG--SLLDADCGRRTHGVVIKVGLESNIYVVNAL 179

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           + M ++ G   DA  V   +P +P+   + +++ G  +    ++ E A+E   L+L K
Sbjct: 180 LCMYAKCGLNADALRVFRDIP-EPNEVTFTTMMGG--LAQTNQIKE-AAELFRLMLRK 233


>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 203/704 (28%), Positives = 342/704 (48%), Gaps = 81/704 (11%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++H  I  L   N  F++  L++MY+KCG  G   +VF EM ERNL +W+ ++ A  
Sbjct: 103 LGRKLHARIGLLEEMNP-FVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYS 161

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +   +   ++ +  M  +G +P+EF +  +++ C + G +E G  IH   ++  +  N  
Sbjct: 162 REQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIR 221

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L  YAK G ++ A R F ++   D   WN++I GY   G   ++  +   M  EG
Sbjct: 222 VSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEG 281

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I                                   E  +   N LI+ Y +S   D A 
Sbjct: 282 I-----------------------------------EPGLVTWNILINSYSQSGKCDDAM 306

Query: 302 KVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           ++ ++M       DV +W ++  GF++N    Q   LF + +L+G  PN VT +  +  C
Sbjct: 307 ELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISAC 366

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L  G++L  +A+  G +++  V +SLI M+ + G +E A  VFD +  K++ TWN
Sbjct: 367 ASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWN 426

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++ GYC           F  + ES V  N  T+                          
Sbjct: 427 SMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTW-------------------------- 460

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEF-----SNGAERLDMASWGAMMSALVHQGHNHE 532
                    +++I  Y+  G  D + +       +G  + D ASW ++++  +  GH ++
Sbjct: 461 ---------NAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNK 511

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ IF  +     +P+   + +IL +CA + A ++ K IH  +++    +E+ VA+ +ID
Sbjct: 512 ALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLID 571

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAK G+I  A+  F Q  +S D+I +N+LI  Y  HG    A+++FD+M    ++PS+ 
Sbjct: 572 TYAKSGNIVYAQTIF-QGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRG 630

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+S++ A S  G+VDKG  +F SM   Y + P  + +  ++D+L R+G L +A   IE 
Sbjct: 631 TFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIED 690

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           M  +P   ++ +LL+  +IHGN  L   A E LL L P N + H
Sbjct: 691 MAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIH 734



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/508 (22%), Positives = 228/508 (44%), Gaps = 44/508 (8%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +A+  + ++   G  +   T++  LQ C      ++GR++H  I   E E +  +   L+
Sbjct: 68  DAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARIGLLE-EMNPFVETKLV 126

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +  A KVF  M ++++ +W+ + G +S  +   +    F   +  G  P+  
Sbjct: 127 SMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEF 186

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
               +L+ CG   D + G  +  L + CG      V++S++ ++ +CG +  A   F+N+
Sbjct: 187 LLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENM 246

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
            Y++  +WN +++GYC         + F  + E G+E    T+                 
Sbjct: 247 DYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTW----------------- 289

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL----DMASWGAMMSAL 524
                             + LI SY   G+ D++ E     E      D+ +W +M+S  
Sbjct: 290 ------------------NILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGF 331

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                  +A+ +F  ++ AG +P+   + + +++CA++ A ++   +H   +K+G   ++
Sbjct: 332 AQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDL 391

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V +++ID Y+K G+++ AR  FD      DV  +N++I  Y   G   +A ++F KM  
Sbjct: 392 LVGNSLIDMYSKSGELEDARRVFDMILK-KDVYTWNSMIGGYCQAGYCGKAYDLFIKMHE 450

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           +++ P+  T+ +++S     G  D+   LF  M+    ++     +  L+    +NG+  
Sbjct: 451 SDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKN 510

Query: 705 DAKHVIEIMP---FQPSPTVYRSLLSGC 729
            A  +   M     +P+     S+L  C
Sbjct: 511 KALGIFRQMQSFCIRPNSVTMLSILPAC 538



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 139/629 (22%), Positives = 252/629 (40%), Gaps = 86/629 (13%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           F  +  +  D   L K L    N      G  +H  +++ G   +I + N+++A+Y+KCG
Sbjct: 175 FMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCG 234

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                 R F+ M  R+ VSW  I++   Q GE +   +++  M+  G  P          
Sbjct: 235 RLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPG--------- 285

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL-NFYAKLGDVAAAERVFYSISS---- 208
                                       V  ++L N Y++ G    A  +   + S    
Sbjct: 286 ---------------------------LVTWNILINSYSQSGKCDDAMELMKKMESFRIV 318

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            DV  W +MI G+A      +AL +   ML  GI  +  T  + +  C+ +     G ++
Sbjct: 319 PDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMEL 378

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H + ++      + + N+LIDMY KS  ++ A +VF+ +  KDV +WN++ GG+ +    
Sbjct: 379 HSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYC 438

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD--EENVTS 386
           G+   LF K   S   PN VT++                     A+  G++   +E+   
Sbjct: 439 GKAYDLFIKMHESDVPPNVVTWN---------------------AMISGYIQNGDEDQAM 477

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            L +   + G ++           ++  +WN L++GY  N      L  F  +    +  
Sbjct: 478 DLFHRMEKDGLIK-----------RDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRP 526

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  T   ++  C      + V +IHG I++    S   + + LI +Y   G +  +    
Sbjct: 527 NSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIF 586

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
            G    D+ SW ++++  V  G +  A+ +F  + + G KP      +I+ + +  G   
Sbjct: 587 QGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVD 646

Query: 567 RTKSI-----HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + K +       + I  G        SA+ID   + G +  A    +      D  ++  
Sbjct: 647 KGKQVFSSMMEDYQILPGLEHH----SAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAA 702

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           L+ A   HG +  A+   +   L  L+PS
Sbjct: 703 LLTASKIHGNIGLAIRAGE--CLLELEPS 729



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 146/313 (46%), Gaps = 6/313 (1%)

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L+  C N   AD +     I + G  V   T+  ++++C    + ++  ++H A I    
Sbjct: 57  LNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLH-ARIGLLE 115

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               ++ + L+  Y   G L  + +        ++ +W AM+ A   +    E V  F  
Sbjct: 116 EMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFF 175

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++E G  PDE++L  IL +C   G  +  K IH  VI+ G N  + V+++++  YAKCG 
Sbjct: 176 MMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGR 235

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR  F ++ +  D + +N++I  Y   G + ++ ++F+KM+   ++P   T+  +++
Sbjct: 236 LSCARRFF-ENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILIN 294

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM---PFQ 716
           + S  G  D    L K M+S + + P    +  ++   ++N     A  +   M     +
Sbjct: 295 SYSQSGKCDDAMELMKKMES-FRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIE 353

Query: 717 PSPTVYRSLLSGC 729
           P+     S +S C
Sbjct: 354 PNGVTVTSGISAC 366


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/682 (27%), Positives = 336/682 (49%), Gaps = 7/682 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QV+    K G + + ++   ++ + +K G     LRVF +    + V W   VS A++NG
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E  + ++M+ DM      PN F     +  C +      G ++H   L+   E + FVG 
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++N YAK GD+ AA R F+ +   +V  W   I G+        A+ ++  M+  G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +KYT  + L  C+ ++      QIHG+++++E+     +  ALI  Y     ++ + KVF
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 305 ERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           E        S W+    G S N +  ++  L  +    G RPN   ++ +         +
Sbjct: 330 EEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---I 385

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G QL   A+  GF+    V S+L  M+ RC  V+ ++ VF+ +  ++  +W  +++G+
Sbjct: 386 EFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGF 445

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +   TF N+   G + +  +   ++  C RSE      ++HG  ++  +    
Sbjct: 446 ATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETT 504

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           +I    I  Y     +  +    +     D   W +M+S     G   EA+++F  +V A
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAA 564

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             + D YI  +IL+ CA I      K +H + IK G  ++  V+S+++  Y++ G++  +
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD+  +  D++ + T+I  YA HG    A+ +FD M    ++P     VSV+SACS 
Sbjct: 625 RKVFDE-ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F SM + YG++P    Y C+VD+L R+G L +AK+ ++ MP +P   V+ 
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743

Query: 724 SLLSGCRIHGNKELGEWASEKL 745
           +L++ CR+H +  LG +   K+
Sbjct: 744 TLVAACRVHDDTVLGRFVENKI 765



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 274/606 (45%), Gaps = 31/606 (5%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P++F+ G+ +  C    A      ++C A K  +  N +V   +++  AK G +  A RV
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F         CWNA + G    G G  A+ +   M++     + +T+  AL  C+   + 
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +GR +HGL++R + E  + +  +L++MY K   M  A + F RM  ++V+SW T   GF
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            ++  P     L  + + +G   N  T + +L  C ++  +    Q+  + L      + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDC 306

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            V  +LI  +   G +E++  VF+   +  N + W+  +SG   N      ++    ++ 
Sbjct: 307 VVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFH 365

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G+  N   +  V  +     + +  GQ+H + IK GF     + S+L   Y     + +
Sbjct: 366 QGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQD 422

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S++     +  D  SW AM++     GH+ EA   F +++  G KPD   L  IL++C  
Sbjct: 423 SYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNR 482

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
                + K +H   +++ +    ++    I  Y+KC  ++ AR  FD +    D +++++
Sbjct: 483 SECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDAT-PCKDQVMWSS 540

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----------HKGLVDKG 670
           +I  YA +G   EA+ +F  M  A+++       S++S C+           H   +  G
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
            L  +S+ S             LV + SR+G ++D++ V + +   P    + +++ G  
Sbjct: 601 ILSDQSVSSS------------LVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYA 647

Query: 731 IHGNKE 736
            HG+ +
Sbjct: 648 QHGSSQ 653



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 180/373 (48%), Gaps = 3/373 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S   G Q+H   +K GF + I + + L  MYS+C       +VF+EM ER+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +V+    +G        + +M  +GF P+  ++ +++  C        G  +H   
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHT 496

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L++  E   F+    ++ Y+K   V  A R+F +    D   W++MI GYA  G G EA+
Sbjct: 497 LRVYGETT-FINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAI 555

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M+   I +D Y   + L  C+ +A     + +HG  I++ +    S+ ++L+ +Y
Sbjct: 556 SLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVY 615

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +S  MD + KVF+ ++  D+++W T+  G++++ +     ++F   +  G RP+ V   
Sbjct: 616 SRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLV 675

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +L  C +   ++ G      +    G   E      ++ +  R G +  A    D++  
Sbjct: 676 SVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 411 K-NITTWNELLSG 422
           K ++  W+ L++ 
Sbjct: 736 KPDLMVWSTLVAA 748



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 26/306 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D + L   LS     +  + G +VHGH +++ +    F+ +  I+MYSKC       
Sbjct: 466 FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTAR 524

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD    ++ V W+ ++S    NG  +  + ++  M       + +   S++ +C  + 
Sbjct: 525 RIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIA 584

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              +   +H +A+K  I  +  V  S++  Y++ G++  + +VF  IS  D+  W  +I 
Sbjct: 585 RPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIID 644

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLI 272
           GYA  G    AL +   M+  G+  D    ++ L  CS   LV      F+  R  +G  
Sbjct: 645 GYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG-- 702

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTL-----------FG 320
               VE  +     ++D+  +S  +  A    + M  K D++ W+TL            G
Sbjct: 703 ----VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLG 758

Query: 321 GFSENK 326
            F ENK
Sbjct: 759 RFVENK 764


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/682 (27%), Positives = 336/682 (49%), Gaps = 7/682 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QV+    K G + + ++   ++ + +K G     LRVF +    + V W   VS A++NG
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNG 149

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E  + ++M+ DM      PN F     +  C +      G ++H   L+   E + FVG 
Sbjct: 150 EGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGT 209

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++N YAK GD+ AA R F+ +   +V  W   I G+        A+ ++  M+  G+ +
Sbjct: 210 SLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAI 269

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +KYT  + L  C+ ++      QIHG+++++E+     +  ALI  Y     ++ + KVF
Sbjct: 270 NKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF 329

Query: 305 ERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           E        S W+    G S N +  ++  L  +    G RPN   ++ +         +
Sbjct: 330 EEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---I 385

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G QL   A+  GF+    V S+L  M+ RC  V+ ++ VF+ +  ++  +W  +++G+
Sbjct: 386 EFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGF 445

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +   TF N+   G + +  +   ++  C RSE      ++HG  ++  +    
Sbjct: 446 ATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETT 504

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           +I    I  Y     +  +    +     D   W +M+S     G   EA+++F  +V A
Sbjct: 505 FINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAA 564

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             + D YI  +IL+ CA I      K +H + IK G  ++  V+S+++  Y++ G++  +
Sbjct: 565 SIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDS 624

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD+  +  D++ + T+I  YA HG    A+ +FD M    ++P     VSV+SACS 
Sbjct: 625 RKVFDE-ISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSR 683

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F SM + YG++P    Y C+VD+L R+G L +AK+ ++ MP +P   V+ 
Sbjct: 684 NGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWS 743

Query: 724 SLLSGCRIHGNKELGEWASEKL 745
           +L++ CR+H +  LG +   K+
Sbjct: 744 TLVAACRVHDDTVLGRFVENKI 765



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/606 (23%), Positives = 274/606 (45%), Gaps = 31/606 (5%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P++F+ G+ +  C    A      ++C A K  +  N +V   +++  AK G +  A RV
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F         CWNA + G    G G  A+ +   M++     + +T+  AL  C+   + 
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +GR +HGL++R + E  + +  +L++MY K   M  A + F RM  ++V+SW T   GF
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            ++  P     L  + + +G   N  T + +L  C ++  +    Q+  + L      + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDC 306

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            V  +LI  +   G +E++  VF+   +  N + W+  +SG   N      ++    ++ 
Sbjct: 307 VVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS-NHSLLRSVQLLRRMFH 365

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G+  N   +  V  +     + +  GQ+H + IK GF     + S+L   Y     + +
Sbjct: 366 QGLRPNDKCYASVFSSV---NSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQD 422

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S++     +  D  SW AM++     GH+ EA   F +++  G KPD   L  IL++C  
Sbjct: 423 SYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNR 482

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
                + K +H   +++ +    ++    I  Y+KC  ++ AR  FD +    D +++++
Sbjct: 483 SECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDAT-PCKDQVMWSS 540

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----------HKGLVDKG 670
           +I  YA +G   EA+ +F  M  A+++       S++S C+           H   +  G
Sbjct: 541 MISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAG 600

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
            L  +S+ S             LV + SR+G ++D++ V + +   P    + +++ G  
Sbjct: 601 ILSDQSVSSS------------LVKVYSRSGNMDDSRKVFDEISV-PDLVAWTTIIDGYA 647

Query: 731 IHGNKE 736
            HG+ +
Sbjct: 648 QHGSSQ 653



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 180/373 (48%), Gaps = 3/373 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S   G Q+H   +K GF + I + + L  MYS+C       +VF+EM ER+ V
Sbjct: 377 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 436

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +V+    +G        + +M  +GF P+  ++ +++  C        G  +H   
Sbjct: 437 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHT 496

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L++  E   F+    ++ Y+K   V  A R+F +    D   W++MI GYA  G G EA+
Sbjct: 497 LRVYGETT-FINDCFISMYSKCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAI 555

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M+   I +D Y   + L  C+ +A     + +HG  I++ +    S+ ++L+ +Y
Sbjct: 556 SLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVY 615

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +S  MD + KVF+ ++  D+++W T+  G++++ +     ++F   +  G RP+ V   
Sbjct: 616 SRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLV 675

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +L  C +   ++ G      +    G   E      ++ +  R G +  A    D++  
Sbjct: 676 SVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPM 735

Query: 411 K-NITTWNELLSG 422
           K ++  W+ L++ 
Sbjct: 736 KPDLMVWSTLVAA 748



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 26/306 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D + L   LS     +  + G +VHGH +++ +    F+ +  I+MYSKC       
Sbjct: 466 FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTAR 524

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD    ++ V W+ ++S    NG  +  + ++  M       + +   S++ +C  + 
Sbjct: 525 RIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIA 584

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              +   +H +A+K  I  +  V  S++  Y++ G++  + +VF  IS  D+  W  +I 
Sbjct: 585 RPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIID 644

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLI 272
           GYA  G    AL +   M+  G+  D    ++ L  CS   LV      F+  R  +G  
Sbjct: 645 GYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG-- 702

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTL-----------FG 320
               VE  +     ++D+  +S  +  A    + M  K D++ W+TL            G
Sbjct: 703 ----VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVLG 758

Query: 321 GFSENK 326
            F ENK
Sbjct: 759 RFVENK 764


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 176/596 (29%), Positives = 306/596 (51%), Gaps = 13/596 (2%)

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           YS H F  K+            ++ + K G +  A RVF  I       ++ M+ GYA  
Sbjct: 106 YSEHLFQTKL------------VSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARN 153

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +A++    M ++G+    Y F   L+ C   AD   G++IH  +I +    ++  +
Sbjct: 154 SSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAM 213

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
             +++MY K   ++ A+K+F+RM ++D++ WNT+  G+++N        L  +    G R
Sbjct: 214 TGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKR 273

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ +T   +L     +  L +G  +   ++  GF    NV+++L+ M+ +CG+V  A  +
Sbjct: 274 PDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLI 333

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD ++ K + +WN ++ GY  N      ++ F  + +  VE+   T    +  C    + 
Sbjct: 334 FDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDV 393

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +    +H  + +    S   + +SLI  Y    ++D + E     +   + SW AM+   
Sbjct: 394 EQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGY 453

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G  +EA+  F  +     KPD + + +++ + A +    + K IH  VI+   +  V
Sbjct: 454 AQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNV 513

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +VA+A++D YAKCG +  AR  FD   +   V  +N +I  Y  HGL   A+E+F+KMK 
Sbjct: 514 FVATALVDMYAKCGAVHTARKLFDM-MDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             ++P++ TF+ V+SACSH GLV++G   F SM   YG++P+ D YG +VD+L R   L 
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLN 632

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A   I+ MP +P+ +V+ ++L  CRIH N ELGE A+ ++  L P +   HVLL+
Sbjct: 633 EAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLA 688



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 229/494 (46%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           I+K G  ++   Q  L++++ K G      RVF  + ++    +  ++    +N   D  
Sbjct: 100 IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDA 159

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           +  +  M+ +G  P  +    ++KVC        G  IHC  +      N F    V+N 
Sbjct: 160 VSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNM 219

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK   V  A ++F  +   D+ CWN +I GYA  G+G  AL +V  M  EG   D  T 
Sbjct: 220 YAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITI 279

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++ L   + V    IGR IHG  +R+  E  +++  AL+DMY K   +  A  +F+RM  
Sbjct: 280 VSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTG 339

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           K V+SWN++  G+ +N +PG    +F K +       +VT    L  C  L D++ G  +
Sbjct: 340 KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFV 399

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L        + +V +SLI M+ +C  V++A  +F+N+ +K + +WN ++ GY  N   
Sbjct: 400 HKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRI 459

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            + +  FC +    ++ +  T   V+              IHG +I+T      ++ ++L
Sbjct: 460 NEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATAL 519

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G +  + +  +  +   + +W AM+      G    A+ +F  + +   KP+E
Sbjct: 520 VDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNE 579

Query: 550 YILGTILNSCAAIG 563
                +L++C+  G
Sbjct: 580 VTFLCVLSACSHSG 593



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 11/421 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  ++  GF +++F    ++ MY+KC       ++FD M ER+LV W  I+S   Q
Sbjct: 194 GKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQ 253

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     L++ + M+  G  P+   + S++     +G+   G SIH ++++   E    V
Sbjct: 254 NGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNV 313

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y+K G V  A  +F  ++   V  WN+MI GY   G    A+ +   M+ E +
Sbjct: 314 STALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQV 373

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            M   T + AL  C+ + D + GR +H L+ + E+   +S++N+LI MY K   +D A +
Sbjct: 374 EMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAE 433

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FE +  K ++SWN +  G+++N    +    F K  L   +P+  T   ++    +L  
Sbjct: 434 IFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSV 493

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L     +  L +         V ++L+ M+ +CGAV  A  +FD +  +++TTWN ++ G
Sbjct: 494 LPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDG 553

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +      L+ F  + +  ++ N  TF  V+  C            H  +++ GF   
Sbjct: 554 YGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACS-----------HSGLVEEGFQYF 602

Query: 483 G 483
           G
Sbjct: 603 G 603



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 231/483 (47%), Gaps = 18/483 (3%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q   LII++ +         L+ ++ K   +  A +VF+ + DK    ++T+  G++ N 
Sbjct: 95  QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNS 154

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +     S F +    G RP    F+ LL+ CG   DL  G ++ C  +  GF       +
Sbjct: 155 SLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMT 214

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            ++ M+ +C  VE A+ +FD +  +++  WN ++SGY  N      L+    + E G   
Sbjct: 215 GVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRP 274

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   ++       + ++   IHG  ++ GF S   + ++L+  Y   G +  +    
Sbjct: 275 DSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIF 334

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAAIGAY 565
           +      + SW +M+   V  G    A+ IF  ++ E  E  +  ++G  L++CA +G  
Sbjct: 335 DRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGA-LHACADLGDV 393

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ + +H  + +L   ++V V +++I  Y+KC  +  A   F ++     ++ +N +I+ 
Sbjct: 394 EQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIF-ENLQHKTLVSWNAMILG 452

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK-----GCLLFKSMDSQ 680
           YA +G ++EA++ F KM+L N++P   T VSV+ A +   ++ +     G ++   +D  
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
             +  +      LVDM ++ G +  A+ + ++M  +   T + +++ G   HG   LG+ 
Sbjct: 513 VFVATA------LVDMYAKCGAVHTARKLFDMMD-ERHVTTWNAMIDGYGTHG---LGKA 562

Query: 741 ASE 743
           A E
Sbjct: 563 ALE 565



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 158/328 (48%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I +   L    ++ S  +G  +HG+ ++ GF + + +   L+ MYSKCG  G    
Sbjct: 273 RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARL 332

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD M  + +VSW  ++   +QNG+    ++++  M           V   +  C  +G 
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +H    ++ +  +  V  S+++ Y+K   V  A  +F ++    +  WNAMI G
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA  G   EA++    M  + I  D +T ++ +   + ++     + IHGL+IR+ ++ +
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +  AL+DMY K   +  A K+F+ M ++ V +WN +  G+  +        LF K   
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
              +PN VTF  +L  C     ++ G Q
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQ 600



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 179/370 (48%), Gaps = 8/370 (2%)

Query: 345 PNHV---TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           P+HV     +ILL  C  + +L    Q   L +  G   E    + L+ +FC+ G++  A
Sbjct: 72  PSHVYKHPSAILLELCTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEA 128

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VF  +  K    ++ +L GY  N    D +  FC +   GV      F Y+++ C  +
Sbjct: 129 ARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDN 188

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            + +   +IH  +I  GF+S  +  + ++  Y     ++ +++  +     D+  W  ++
Sbjct: 189 ADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTII 248

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S     G    A+ +   + E G++PD   + +IL + A +G+ +  +SIH + ++ GF 
Sbjct: 249 SGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFE 308

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           + V V++A++D Y+KCG +  AR+ FD+      V+ +N++I  Y  +G    AMEIF K
Sbjct: 309 SFVNVSTALVDMYSKCGSVGTARLIFDR-MTGKTVVSWNSMIDGYVQNGDPGAAMEIFQK 367

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M    ++ +  T +  + AC+  G V++G  + K +D Q  +         L+ M S+  
Sbjct: 368 MMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLD-QLELGSDVSVMNSLISMYSKCK 426

Query: 702 YLEDAKHVIE 711
            ++ A  + E
Sbjct: 427 RVDIAAEIFE 436


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/725 (25%), Positives = 356/725 (49%), Gaps = 20/725 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I       D+F+   L+ MY K G+     +VFD+M  +++ SW  ++S   Q
Sbjct: 146 GVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQ 205

Query: 123 NGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +      L+++  M+   G  P+  ++ ++      +   +   SIH +   +R      
Sbjct: 206 SSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYV--VRRCVFGV 263

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y+K G+V  A ++F  +   D   W  M+ GY H G  FE L ++  M  + 
Sbjct: 264 VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKH 323

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I M+K + +N++   +   D + G+++H   ++  +   I +   ++ MY K   +  A 
Sbjct: 324 IKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAK 383

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           + F  +  +D++ W+       +   PG+  S+F +    G +P+    S L+  C ++ 
Sbjct: 384 EFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEIS 443

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
              LG  + C  +      + +V ++L+ M+ RC +   A ++F+ + YK++  WN L++
Sbjct: 444 SSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLIN 503

Query: 422 GYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           G+   C D  + L+ F  +  SGV+ +  T   ++  C   ++  +    HG IIK G  
Sbjct: 504 GFT-KCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIE 562

Query: 481 SCGYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           S  ++  +LI  Y   G L   +N F  +   +  D  SW  M++  +H G  +EA++ F
Sbjct: 563 SEMHVKVALIDMYAKCGSLCTAENLFHLNKHVK--DEVSWNVMIAGYLHNGCANEAISTF 620

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           + +     +P+     TIL + + +   +   + H  +I++GF +   + +++ID YAK 
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKS 680

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  +   F +  N    I +N ++  YA HG    A+ +F  M+  ++     +++SV
Sbjct: 681 GQLSYSEKCFHEMENKG-TISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISV 739

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SAC H GL+ +G  +F+SM  ++ ++PS + Y C+VD+L   G  ++   +I+ MP +P
Sbjct: 740 LSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEP 799

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK---------RKRQREG 768
              V+ +LL  C++H N +LGE A   LL L P+N   +++LS            R+   
Sbjct: 800 DAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRS 859

Query: 769 NLLDH 773
           N+ DH
Sbjct: 860 NMTDH 864



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 278/534 (52%), Gaps = 23/534 (4%)

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
           SI++  +  WN++I  Y+      EA+    +M + G+  DKYTF   L+ C+   DF  
Sbjct: 86  SITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHE 145

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G  IH  I   E+EC + I   L+DMY K   +D A KVF++M  KDV SWN +  G S+
Sbjct: 146 GVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQ 205

Query: 325 NKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE- 382
           + NP +   +F +  +  G  P+ V+   L     +L D+D      C ++H G++    
Sbjct: 206 SSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVD-----SCKSIH-GYVVRRC 259

Query: 383 ---NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               V++SLI M+ +CG V++AH +FD +  K+  +W  +++GY  + C  +VL+    +
Sbjct: 260 VFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEM 319

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
               +++N  +    V     + + +   ++H   ++ G +S   + + ++  Y   G+L
Sbjct: 320 KRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGEL 379

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             + EF    E  D+  W A +SALV  G+  EA++IF  +   G KPD+ IL +++++C
Sbjct: 380 KKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSAC 439

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A I + +  K +H +VIK    +++ VA+ ++  Y +C     A   F++  +  DV+ +
Sbjct: 440 AEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNR-MHYKDVVAW 498

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----HKGLVDKGCLLF 674
           NTLI  +   G    A+E+F +++L+ +QP   T VS++SAC+     + G+   G ++ 
Sbjct: 499 NTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIK 558

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
             ++S+  ++ +      L+DM ++ G L  A+++  +         +  +++G
Sbjct: 559 NGIESEMHVKVA------LIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAG 606



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/640 (24%), Positives = 302/640 (47%), Gaps = 11/640 (1%)

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + +   +L+ W  ++ A  +   F   +K Y  M   G  P+++    V+K C   GA +
Sbjct: 85  NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACT--GALD 142

Query: 163 F--GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           F  G +IH       +E + F+G  +++ Y K+G +  A +VF  +   DV  WNAMI G
Sbjct: 143 FHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISG 202

Query: 221 YAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            +      EAL +   M + EG+  D  + +N     S + D D  + IHG ++R    C
Sbjct: 203 LSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVR---RC 259

Query: 280 SISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              +V N+LIDMY K   +  A ++F++M  KD ISW T+  G+  +    +   L  + 
Sbjct: 260 VFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEM 319

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
                + N ++    +    +  DL+ G ++   AL  G   +  V + ++ M+ +CG +
Sbjct: 320 KRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGEL 379

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A   F ++  +++  W+  LS         + L  F  +   G++ +      +V  C
Sbjct: 380 KKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSAC 439

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
               + ++   +H  +IK    S   + ++L+  Y        +    N     D+ +W 
Sbjct: 440 AEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWN 499

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            +++     G    A+ +F  L  +G +PD   + ++L++CA +         H  +IK 
Sbjct: 500 TLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKN 559

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G  +E++V  A+ID YAKCG +  A   F  + +  D + +N +I  Y H+G  +EA+  
Sbjct: 560 GIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAIST 619

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F++MKL +++P+  TFV+++ A S+  ++ +  + F +   + G   S      L+DM +
Sbjct: 620 FNQMKLESVRPNLVTFVTILPAVSYLSIL-REAMAFHACIIRMGFISSTLIGNSLIDMYA 678

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           ++G L  ++     M  + + + + ++LSG  +HG  E+ 
Sbjct: 679 KSGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGEVA 717



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 155/564 (27%), Positives = 270/564 (47%), Gaps = 12/564 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA ++S  E++ S      +HG++V+        + N+LI MYSKCG      ++FD+M 
Sbjct: 235 LAPAVSRLEDVDS---CKSIHGYVVRRCVFG--VVSNSLIDMYSKCGEVKLAHQIFDQMW 289

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ +SW  +++  + +G +   L++  +MK      N+ +V + +         E G  
Sbjct: 290 VKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKE 349

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H +AL++ +  +  V   +++ YAK G++  A+  F S+   D+  W+A +      GY
Sbjct: 350 VHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGY 409

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL++   M  EG+  DK    + +  C+ ++   +G+ +H  +I++++   IS+   
Sbjct: 410 PGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATT 469

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+ MY +     YA  +F RM  KDV++WNTL  GF++  +P     +F +  LSG +P+
Sbjct: 470 LVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPD 529

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T   LL  C  L DL LG+      +  G   E +V  +LI M+ +CG++  A ++F 
Sbjct: 530 SGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFH 589

Query: 407 -NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            N   K+  +WN +++GY  N C  + + TF  +    V  N  TF  ++         +
Sbjct: 590 LNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILR 649

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                H  II+ GF S   I +SLI  Y   GQL  S +  +  E     SW AM+S   
Sbjct: 650 EAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYA 709

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G    A+ +F  + E     D     ++L++C   G  Q  ++I   +      TE +
Sbjct: 710 MHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSM------TEKH 763

Query: 586 VASAVIDAYAKCGDIKGARMAFDQ 609
                ++ YA   D+ G    FD+
Sbjct: 764 NLEPSMEHYACMVDLLGCAGLFDE 787



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 14/347 (4%)

Query: 29  CGNNQFCSDSFLR-------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFL 81
           CG+ +   + FLR        D   +   LS    L    LG   HG+I+K G  +++ +
Sbjct: 508 CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHV 567

Query: 82  QNNLIAMYSKCGYFGWGLRVFD-EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           +  LI MY+KCG       +F      ++ VSW ++++  + NG  +  +  +  MK   
Sbjct: 568 KVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLES 627

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             PN     +++     +       + H   +++    +  +G S+++ YAK G ++ +E
Sbjct: 628 VRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSE 687

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           + F+ + +     WNAM+ GYA  G G  AL + S M    + +D  ++I+ L  C    
Sbjct: 688 KCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAG 747

Query: 261 DFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTL 318
               GR I   +  +  +E S+     ++D+   +   D    + ++M  + D   W  L
Sbjct: 748 LIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGAL 807

Query: 319 FGG--FSENKNPGQTASLFHKFILSGSRPNH-VTFSILLRQCGKLLD 362
            G      N   G+ A L H   L      H +  S +  QCG+ +D
Sbjct: 808 LGACKMHSNVKLGEIA-LHHLLKLEPRNAVHYIVLSDIYAQCGRWID 853


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 164/586 (27%), Positives = 311/586 (53%), Gaps = 1/586 (0%)

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           ++  N  +G  ++  Y +     +A +VF  + + +   W ++I  +   G   +AL + 
Sbjct: 81  QLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLF 140

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           SSML  G   D++   +A++ C+ + D   GRQ+H   ++SE    + + NAL+ MY K+
Sbjct: 141 SSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKN 200

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSIL 353
             +D  F +FER+ DKD+ISW ++  GF++     +   +F + I+ GS  PN   F   
Sbjct: 201 GLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSA 260

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            R CG +   + G Q+  L++      +  V  SL  M+ RC  ++ A   F  +   ++
Sbjct: 261 FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDL 320

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +++ Y      ++ L  F  + +SG+  +G T   ++  C   +       IH  
Sbjct: 321 VSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSY 380

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K G      +C+SL+  Y     L ++ +  +  +  D+ +W ++++A     H  E 
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  L ++    D   L  +L++ A +G ++  K +H +  K G   +  +++ +ID 
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  A   F+   N+ DV  +++LI+ YA  G   EA ++F +M+   ++P+  T
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 560

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+ V++ACS  G V++GC  +  M+ +YG+ P+ +   C+VD+L+R G L +A + I+ M
Sbjct: 561 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 620

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           PF+P   ++++LL+  ++H + E+G+ A+E +L + P + AA+VLL
Sbjct: 621 PFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLL 666



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/653 (26%), Positives = 300/653 (45%), Gaps = 18/653 (2%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIV-------KLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           A  +S    L+S   G +VH H+V             +  L N+LI MY +C       +
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFDEM  RN VSW  +++A +QNG     L ++  M  +G   ++FA+GS ++ C  +G 
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  +H  ALK     +  V  +++  Y+K G V     +F  I   D+  W ++I G
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227

Query: 221 YAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +A  G+  EAL V   M+ EG    +++ F +A + C  V  ++ G QIHGL I+  ++ 
Sbjct: 228 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  +L DMY +   +D A   F R+   D++SWN++   +S      +   LF +  
Sbjct: 288 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 347

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG RP+ +T   LL  C     L  G  +    +  G   + +V +SL+ M+ RC  + 
Sbjct: 348 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLS 407

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF  +  +++ TWN +L+    +    +VLK F  + +S   ++  +   V+    
Sbjct: 408 SAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASA 467

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWG 518
                +MV Q+H    K G      + ++LI +Y   G LD++   F       D+ SW 
Sbjct: 468 ELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWS 527

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IK 577
           +++      G+  EA  +F  +   G +P+      +L +C+ +G        +  +  +
Sbjct: 528 SLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPE 587

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G        S ++D  A+ G +  A    DQ     D+I++ TL+ A   H      ME
Sbjct: 588 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH----NDME 643

Query: 638 IFDKMK--LANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +  +    + N+ PS  A +V + +  +  G  ++   L K+M +  G++ SP
Sbjct: 644 MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTS-GVKKSP 695



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 1/118 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   LS S  L    +  QVH +  K G  +D  L N LI  Y+KCG     +R+F
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514

Query: 103 DEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + M   R++ SW+ ++    Q G       ++  M++ G  PN      V+  C  +G
Sbjct: 515 EIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 185/662 (27%), Positives = 327/662 (49%), Gaps = 7/662 (1%)

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           ++ + +K G     LRVF +    + V W   VS A++NGE  + ++M+ DM      PN
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
            F     +  C +      G ++H   L+   E + FVG S++N YAK GD+ AA R F+
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +   +V  W   I G+        A+ ++  M+  G+ ++KYT  + L  C+ ++    
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVRE 180

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFS 323
             QIHG+++++E+     +  ALI  Y     ++ + KVFE        S W+    G S
Sbjct: 181 ASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVS 240

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            N +  ++  L  +    G RPN   ++ +         ++ G QL   A+  GF+    
Sbjct: 241 -NHSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNS---IEFGGQLHSSAIKEGFIHGIL 296

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V S+L  M+ RC  V+ ++ VF+ +  ++  +W  +++G+  +    +   TF N+   G
Sbjct: 297 VGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDG 356

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            + +  +   ++  C R E      ++HG  ++  +    +I    I  Y     +  + 
Sbjct: 357 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTAR 415

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              +   R D   W +M+S     G   EA+++F  +V A  + D YI  +IL+ CA I 
Sbjct: 416 RIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIA 475

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
                K +H + IK G  ++  V+S+++  Y++ G++  +R  FD+  +  D++ + T+I
Sbjct: 476 RPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDE-ISVPDLVAWTTII 534

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             YA HG    A+ +FD M    ++P     VSV+SACS  GLV++G   F SM + YG+
Sbjct: 535 DGYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGV 594

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           +P    Y C+VD+L R+G L +AK+ ++ MP +P   V+ +LL+ CR+H +  LG +   
Sbjct: 595 EPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLGRFVEN 654

Query: 744 KL 745
           K+
Sbjct: 655 KI 656



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 135/570 (23%), Positives = 262/570 (45%), Gaps = 7/570 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG +++     D+F+  +L+ MY+KCG  G  +R F  M  RN+VSWT  ++  +
Sbjct: 79  VGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFV 138

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+ E    + +  +M  NG   N++   S++  C  M        IH   LK  +  +  
Sbjct: 139 QDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCV 198

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  ++++ Y   G +  +E+VF    +  +   W+A I G ++      ++ ++  M  +
Sbjct: 199 VKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNHSL-LRSVQLLRRMFHQ 257

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +   + +     S V   + G Q+H   I+      I + +AL  MY +   +  +
Sbjct: 258 GLRPNDKCYASVF---SSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDS 314

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +KVFE M ++D +SW  +  GF+ + +  +    F   IL G +P+HV+ + +L  C + 
Sbjct: 315 YKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRP 374

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++    L   + +   +    I M+ +C  V+ A  +FD    K+   W+ ++
Sbjct: 375 ECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMI 433

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N C  + +  F  +  + + ++      ++  C           +HG  IK G  
Sbjct: 434 SGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGIL 493

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + SSL+K Y   G +D+S +  +     D+ +W  ++      G +  A+ +F  +
Sbjct: 494 SDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLM 553

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           V+ G +PD  +L ++L++C+  G  ++     +      G   E+     ++D   + G 
Sbjct: 554 VQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGR 613

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +  A+   D      D++V++TL+ A   H
Sbjct: 614 LAEAKYFVDSMPMKPDLMVWSTLLAACRVH 643



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 180/373 (48%), Gaps = 3/373 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S   G Q+H   +K GF + I + + L  MYS+C       +VF+EM ER+ V
Sbjct: 268 SVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGV 327

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +V+    +G        + +M  +GF P+  ++ +++  C        G  +H   
Sbjct: 328 SWTAMVAGFATHGHSVEAFLTFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHT 387

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L++  E   F+    ++ Y+K   V  A R+F +    D   W++MI GYA  G G EA+
Sbjct: 388 LRVYGETT-FINDCFISMYSKCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAI 446

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M+   I +D Y   + L  C+ +A     + +HG  I++ +    S+ ++L+ +Y
Sbjct: 447 SLFQLMVAASIRIDSYICSSILSLCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVY 506

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +S  MD + KVF+ ++  D+++W T+  G++++ +     ++F   +  G RP+ V   
Sbjct: 507 SRSGNMDDSRKVFDEISVPDLVAWTTIIDGYAQHGSSQNALAMFDLMVQLGVRPDTVVLV 566

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            +L  C +   ++ G      +    G   E      ++ +  R G +  A    D++  
Sbjct: 567 SVLSACSRNGLVEQGFNYFNSMRTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPM 626

Query: 411 K-NITTWNELLSG 422
           K ++  W+ LL+ 
Sbjct: 627 KPDLMVWSTLLAA 639



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 26/306 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D + L   LS     +  + G +VHGH +++ +    F+ +  I+MYSKC       
Sbjct: 357 FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRV-YGETTFINDCFISMYSKCQGVQTAR 415

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD    ++ V W+ ++S    NG  +  + ++  M       + +   S++ +C  + 
Sbjct: 416 RIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILSLCADIA 475

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              +   +H +A+K  I  +  V  S++  Y++ G++  + +VF  IS  D+  W  +I 
Sbjct: 476 RPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVAWTTIID 535

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLI 272
           GYA  G    AL +   M+  G+  D    ++ L  CS   LV      F+  R  +G  
Sbjct: 536 GYAQHGSSQNALAMFDLMVQLGVRPDTVVLVSVLSACSRNGLVEQGFNYFNSMRTAYG-- 593

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTL-----------FG 320
               VE  +     ++D+  +S  +  A    + M  K D++ W+TL            G
Sbjct: 594 ----VEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVLG 649

Query: 321 GFSENK 326
            F ENK
Sbjct: 650 RFVENK 655


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 293/570 (51%), Gaps = 2/570 (0%)

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFI 250
           K G +  A R+F  +S  D   W  +I GY +     EAL +  +M  E G+ +D +   
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            A + C L +D + G  +HG  +++ +  S+ + +AL+DMY K+  +    +VF  M  +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +V+SW  +  G        +    F +   S    +  TF+I L+ C     L+ G ++ 
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             A+  GF     V ++L  M+ +CG +E   ++F+ +S +++ +W  +++       + 
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             ++ F  + ES V  N  TF  V+  C      +   Q+H  I+  G ++   + +S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   GQL +S    +   R D+ SW  +++     GH  EA  +   +   G KP E+
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            L ++L++C  +   +  K +H +V+ +G      V SA+I+ Y KCG I+ A   FD +
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            N +D++ +  +I  YA HG   E +++F+K+    L+P   TF+ V+SACSH GLVD G
Sbjct: 481 EN-DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLG 539

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
              F +M  +Y + PS + YGC++D+L R G L DA+H+IE MPF     V+ +LL  CR
Sbjct: 540 FRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACR 599

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +HG+ E G   +E++L L P     H+ L+
Sbjct: 600 VHGDVERGRRTAERILQLEPNCAGTHITLA 629



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 151/625 (24%), Positives = 283/625 (45%), Gaps = 28/625 (4%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D+   N  +    K G+ G   R+FD+M++++ +SWT ++S  +   +    L ++ +M
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106

Query: 137 KT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           +  +G   + F +    K C       +G  +H +A+K  +  + FVG ++L+ Y K G 
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +    RVF+ +   +V  W A+I G    GY  EAL   S M    +  D YTF  AL+ 
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+     + GR+IH   ++   + S  + N L  MY K   ++Y   +FE+M+ +DV+SW
Sbjct: 227 CADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            T+     +          F +   S   PN  TF+ ++  C  L  ++ G QL  L LH
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G     +V +S++ M+ +CG +  +  +F  ++ ++I +W+ +++GY      ++  + 
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFEL 406

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +   G +        V+  C      +   Q+H  ++  G      + S+LI  Y  
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCK 466

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G ++ +    + AE  D+ SW AM++     G++ E + +F  +   G +PD      +
Sbjct: 467 CGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGV 526

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFN-----TEVYVASA-------VIDAYAKCGDIKGA 603
           L++C+           H  ++ LGF      ++ Y  S        +ID   + G +  A
Sbjct: 527 LSACS-----------HAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDA 575

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACS 662
               +      D +V++TL+ A   HG V       +  ++  L+P+ A T +++ +  +
Sbjct: 576 EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAE--RILQLEPNCAGTHITLANIYA 633

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSP 687
            KG   +   + K M S+ G+   P
Sbjct: 634 SKGKWREAADIRKLMKSK-GVIKEP 657



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 247/549 (44%), Gaps = 41/549 (7%)

Query: 37  DSFLRKDPIFLA---KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           +S LR DP  L+   K+  L+ ++     G  +HG+ VK G  N +F+ + L+ MY+K G
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVN---YGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
               G RVF EM  RN+VSWT I++  ++ G     L  + +M  +    + +     +K
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C   GA  +G  IH  A+K   + + FV  ++   Y K G +     +F  +S  DV  
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W  +I      G    A+     M    ++ ++YTF   + GC+ +A  + G Q+H LI+
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
              +  S+S+ N+++ MY K   +  +  +F  M  +D++SW+T+  G+S+  +  +   
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFE 405

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L     + G +P     + +L  CG +  L+ G QL    L  G      V S+LI M+C
Sbjct: 406 LLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYC 465

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG++E A  +FD     +I +W  +++GY  +    +V+  F  I   G+  +  TF  
Sbjct: 466 KCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIG 525

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           V+  C            H  ++  GF                F  +   ++ S   E   
Sbjct: 526 VLSACS-----------HAGLVDLGFRY--------------FNAMSKKYQISPSKEH-- 558

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIH 572
              +G M+  L   G   +A      ++EA     D+ +  T+L +C   G  +R +   
Sbjct: 559 ---YGCMIDLLCRAGRLSDA----EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTA 611

Query: 573 PFVIKLGFN 581
             +++L  N
Sbjct: 612 ERILQLEPN 620


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 181/621 (29%), Positives = 322/621 (51%), Gaps = 5/621 (0%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           F P+ +   S++  C +  + ++   IH   LK   + +  +   ++N Y K G +  A 
Sbjct: 157 FEPSTYT--SLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDAR 214

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF ++   +V  W +MI GY+  G   +A+ +   M   G   D+ TF + ++ C +  
Sbjct: 215 KVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAG 274

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D D+GRQ+H  +I+S     ++  NALI MY     +++A  VF R+  KD+ISW T+  
Sbjct: 275 DIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT 334

Query: 321 GFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
           G+ +     +   LF   +  G+ +PN   F  +   C  LL+L+ G Q+  + +  G  
Sbjct: 335 GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 394

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
                  SL  M+ + G +  A   F  +   +I +WN +++ +  N    + +  F  +
Sbjct: 395 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 454

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              G+  +  T+  ++ TC          QIH  I+K GF     +C+SL+  Y     L
Sbjct: 455 IHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHL 514

Query: 500 DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            ++   F + +   ++ SW A++SA + +    E   ++  +  +G KPD   + T+L +
Sbjct: 515 HDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 574

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA + +      +H + IK G   +V V + +ID YAKCG +K AR  FD + N  D++ 
Sbjct: 575 CAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNL-DIVS 633

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +++LI+ YA  GL  EA+ +F  M    +QP++ T++  +SACSH GLV++G  L+KSM+
Sbjct: 634 WSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSME 693

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           +++G+ P+ + + C+VD+L+R G L +A+  I+        T +++LL+ C+ H N ++ 
Sbjct: 694 TEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIA 753

Query: 739 EWASEKLLLLLPKNDAAHVLL 759
           E  +  +L L P N AA V+L
Sbjct: 754 ERGAGNILKLDPSNSAAMVML 774



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 301/636 (47%), Gaps = 7/636 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N +S     ++H H++K  +   I LQN++I MY KCG      +VFD M   N+VSWT 
Sbjct: 171 NFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTS 230

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S   QNG+ +  + MY+ M  +G  P++   GSV+K C   G  + G  +H   +K  
Sbjct: 231 MISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSW 290

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
              +     ++++ Y   G +  A  VF  I + D+  W  MI GY   GY  EAL +  
Sbjct: 291 FGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFR 350

Query: 236 SMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
            +L +G    +++ F +    CS + + + G+Q+HG+ ++  +  ++    +L DMY K 
Sbjct: 351 DLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKF 410

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A   F ++ + D++SWN +   F++N +  +    F + I  G  P+ +T+  LL
Sbjct: 411 GFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLL 470

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NI 413
             CG  + L+ G Q+    +  GF  E  V +SL+ M+ +C  +  A +VF ++S   N+
Sbjct: 471 CTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANL 530

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +LS       + +  + +  +  SG + +  T   ++ TC    +  +  Q+H  
Sbjct: 531 VSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCY 590

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            IK+G      +C+ LI  Y   G L ++ +  +  + LD+ SW +++      G  HEA
Sbjct: 591 SIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEA 650

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVID 592
           + +F  +   G +P+E      L++C+ IG  +    ++  +  + G        S ++D
Sbjct: 651 LNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVD 710

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ- 651
             A+ G +  A     +S    D+  + TL+ A   H  V  A        +  L PS  
Sbjct: 711 LLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAER--GAGNILKLDPSNS 768

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           A  V + +  +  G  ++   L K M  Q G+Q  P
Sbjct: 769 AAMVMLCNIHASAGNWEEVAKLRKLM-KQMGVQKVP 803



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D I +   L     L S  +G QVH + +K G   D+ + N LI MY+KCG       
Sbjct: 562 KPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD     ++VSW+ ++    Q G     L ++  M   G  PNE      +  C  +G 
Sbjct: 622 VFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGL 681

Query: 161 SEFGYSIH 168
            E G+ ++
Sbjct: 682 VEEGWRLY 689


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 191/704 (27%), Positives = 345/704 (49%), Gaps = 28/704 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-----NLVSWTLIV 117
           G  +H  IV +G  +D ++  +LI MY KCG  G  L+VFD+M+E      ++  W  ++
Sbjct: 74  GRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVI 133

Query: 118 SAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
               + G F+ GL  +  M+  + +M                     G  IH + ++   
Sbjct: 134 DGYFKYGHFEEGLAQFCRMQELSWYMA--------------------GRQIHGYIIRNMF 173

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVS 235
           E +P++  +++  Y+       A  +F  + +  ++  WN MIGG+   G   ++L + S
Sbjct: 174 EGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYS 233

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
               E   +   +F  A   CS     D GRQ+H  +I+   +    +  +L+ MY KS 
Sbjct: 234 LAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSG 293

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A KVF+++ DK+V   N +   F  N        L++K     +  +  T S LL 
Sbjct: 294 SVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLS 353

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  +   D G  +    +         + S+L+ M+ +CG+ E A SVF  +  +++  
Sbjct: 354 GCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVA 413

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           W  +++G+C N    D L  F  + + GV+ +      V+      EN ++   IHG  I
Sbjct: 414 WGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 473

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G  S  ++  SL+  Y  FG  +++    +     ++ +W +M+S     G    ++ 
Sbjct: 474 KRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSIN 533

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +   +++ G   D   + T+L + +++ A  + K++H + I+L   +++ V +A+ID Y 
Sbjct: 534 LLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYV 593

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG +K A++ F+     N ++ +N++I  Y  HG   EA+ +F +MK +   P + TF+
Sbjct: 594 KCGCLKYAQLIFENMPRRN-LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFL 652

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           +++++CSH G+V++G  LF+ M  +YG++P  + Y  +VD+L R G L+DA   I  MP 
Sbjct: 653 ALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPI 712

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
               +V+  LL  CR H N ELGE  ++ LL + P   + +V L
Sbjct: 713 DADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPL 756



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 156/630 (24%), Positives = 292/630 (46%), Gaps = 36/630 (5%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           + A +Q G++   L+++     +     +F   S++K C S+     G +IH   + + +
Sbjct: 27  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 86

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSI-----SSDDVGCWNAMIGGYAHCGYGFEAL 231
           + +P++  S++N Y K G + +A +VF  +     S+ D+  WN +I GY   G+ FE  
Sbjct: 87  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGH-FE-- 143

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSL--VADFDIGRQIHGLIIRSEVECSISIVNALID 289
                   EG+           Q C +  ++ +  GRQIHG IIR+  E    +  ALI 
Sbjct: 144 --------EGLA----------QFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIG 185

Query: 290 MYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           MY   S    A+ +F ++ ++ ++++WN + GGF EN    ++  L+        +    
Sbjct: 186 MYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSA 245

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +F+     C     LD G Q+ C  +   F D+  V +SL+ M+ + G+VE A  VFD V
Sbjct: 246 SFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV 305

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             K +   N ++S +  N    D L  +  +      V+  T   ++  C    +     
Sbjct: 306 LDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGR 365

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +H  +IK    S   I S+L+  Y   G  +++       +  D+ +WG+M++      
Sbjct: 366 TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNR 425

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A+ +F ++ + G K D  ++ +++++   +   +    IH F IK G  ++V+VA 
Sbjct: 426 RFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVAC 485

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           +++D Y+K G  + A M F    N N ++ +N++I  Y+ +GL   ++ +  ++      
Sbjct: 486 SLVDMYSKFGFAESAEMVFSSMPNKN-LVAWNSMISCYSWNGLPEMSINLLPQILQHGFY 544

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDA 706
               +  +V+ A S    + KG  L      Q  +Q   D      L+DM  + G L+ A
Sbjct: 545 LDSVSITTVLVAVSSVAALLKGKTLHA---YQIRLQIPSDLQVENALIDMYVKCGCLKYA 601

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           + + E MP + +   + S+++G   HGN E
Sbjct: 602 QLIFENMP-RRNLVTWNSMIAGYGSHGNCE 630



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 178/343 (51%), Gaps = 1/343 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G  VH  ++K    +++ +Q+ L+ MY KCG       VF  M ER++V+W  +++   
Sbjct: 363 FGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFC 422

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN  F   L ++  M+  G   +   + SV+   + +   E G+ IH FA+K  +E + F
Sbjct: 423 QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVF 482

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V CS+++ Y+K G   +AE VF S+ + ++  WN+MI  Y+  G    ++N++  +L  G
Sbjct: 483 VACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 542

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             +D  +    L   S VA    G+ +H   IR ++   + + NALIDMY+K   + YA 
Sbjct: 543 FYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQ 602

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +FE M  +++++WN++  G+  + N  +   LF +   S + P+ VTF  L+  C    
Sbjct: 603 LIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSG 662

Query: 362 DLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            ++ GL L Q + +  G        +S++ +  R G ++ A+S
Sbjct: 663 MVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYS 705



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/522 (23%), Positives = 238/522 (45%), Gaps = 30/522 (5%)

Query: 201 RVFYSISSDDVG-CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           R FYS+   +V    N+ I      G   +AL + S      +T  K+TF + L+ C+ +
Sbjct: 9   RKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASL 68

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-----KDVIS 314
           ++   GR IH  I+   ++    I  +LI+MY+K   +  A +VF++M++      D+  
Sbjct: 69  SNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITV 128

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN +  G+ +  +       F + +    R   +++ +             G Q+    +
Sbjct: 129 WNPVIDGYFKYGH-------FEEGLAQFCRMQELSWYM------------AGRQIHGYII 169

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVL 433
              F  +  + ++LI M+  C     A S+F  +  + NI  WN ++ G+  N      L
Sbjct: 170 RNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSL 229

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + +        ++   +F      C   E      Q+H  +IK  F    Y+C+SL+  Y
Sbjct: 230 ELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMY 289

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP-DEYIL 552
              G ++++ +  +     ++    AM+SA +  G  ++A+ +++ + +AGE P D + +
Sbjct: 290 AKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDSFTI 348

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            ++L+ C+ +G+Y   +++H  VIK    + V + SA++  Y KCG  + A   F  +  
Sbjct: 349 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVF-YTMK 407

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             DV+ + ++I  +  +    +A+++F  M+   ++       SV+SA      V+ G L
Sbjct: 408 ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHL 467

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +      + G++        LVDM S+ G+ E A+ V   MP
Sbjct: 468 I-HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMP 508



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 2/278 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   +   +S    L++  LG  +HG  +K G  +D+F+  +L+ MYSK G+     
Sbjct: 442 VKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAE 501

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF  M  +NLV+W  ++S    NG  +M + +   +  +GF  +  ++ +V+    S+ 
Sbjct: 502 MVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVA 561

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G ++H + ++++I  +  V  ++++ Y K G +  A+ +F ++   ++  WN+MI 
Sbjct: 562 ALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIA 621

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVE 278
           GY   G   EA+ +   M       D+ TF+  +  CS     + G  +  L+ I   VE
Sbjct: 622 GYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVE 681

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISW 315
             +    +++D+  ++  +D A+     M  D D   W
Sbjct: 682 PRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVW 719


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 213/726 (29%), Positives = 356/726 (49%), Gaps = 15/726 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   +S S ++ +   G  +HG   K G  +D FL N LI MY+KCG       VF
Sbjct: 72  DSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVF 131

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R+++SW  ++     N      L  +  M  +    +  ++   +     +G   
Sbjct: 132 GGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELS 191

Query: 163 FGYSIHCFALKI---RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           FG  IH + +K+    I  N F   S+++ Y++  D+ AAE +F  +   D+  WNAM+ 
Sbjct: 192 FGQVIHGWGIKLGYKDISHNSFEN-SLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLD 250

Query: 220 GYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G A     +EA +++  M   G +  D  T +  +  C+ +     GR +HGL +R E+ 
Sbjct: 251 GLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMG 310

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              S+ N+LIDMY K   +  A  VF+ + ++D++SWN +  G+S+N +  +   LF + 
Sbjct: 311 LDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQL 370

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           + S S+ +  T   +L  C     L  G  + C  L  GF +     +SL+ M+  CG +
Sbjct: 371 LQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL 430

Query: 399 EMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVV 455
               S+   VS   +I  WN +++G   N    + LK F N+     +V  +    F V+
Sbjct: 431 VACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAF-NLMRQDPDVCHDSVALFNVI 489

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C   E     G +HG  +KT   S   + ++LI  Y   G+++N+      +   ++ 
Sbjct: 490 SACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLC 549

Query: 516 SWGAMMSALVHQGHNHEAVTIF-HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           SW  M+SA         A+ +F H   E    P+E  +  IL++C  +G  +  K IH  
Sbjct: 550 SWNCMISAFSQNKDGRRALELFCHIEFE----PNEITIVGILSACTQLGVLRHGKQIHGH 605

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           VI+       +V++A+ D Y+ CG +  A   F QS     V  +N++I A+  H    +
Sbjct: 606 VIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIF-QSSPERSVAAWNSMISAFGFHSNGGK 664

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+E+F +M+    +P+++TF+S++SACSH GLV++G   + +M   + ++   + + C+V
Sbjct: 665 AIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMV 724

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           DML R G L +A   I  MP QP P V+ +LLS C  HG+ ++G   +E L  L P+N  
Sbjct: 725 DMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVG 784

Query: 755 AHVLLS 760
            ++ LS
Sbjct: 785 YYISLS 790



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 165/657 (25%), Positives = 320/657 (48%), Gaps = 11/657 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
            +L+  YS+   F     +FDE+  R+++ W  +++A+++N  F + + ++V++   G  
Sbjct: 11  TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            +   +  V+     MG    G  +H  + K  +  + F+  ++++ YAK G+++++E V
Sbjct: 71  LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   D+  WN+M+ G A+  Y  ++L     M +     D  +   A+   +L+ + 
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGEL 190

Query: 263 DIGRQIHGLIIRSEVE--CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
             G+ IHG  I+   +     S  N+LI +Y +   +  A  +F+ M  KD++SWN +  
Sbjct: 191 SFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLD 250

Query: 321 GFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
           G + N+   +   L H+  L G  +P+ VT  I++  C +L+ L  G  +  L L     
Sbjct: 251 GLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMG 310

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            + +VT+SLI M+ +C  V+ A  VF  +  +++ +WN ++SGY  N    +    F  +
Sbjct: 311 LDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQL 370

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            +S  + +  T   ++ +C  SE  Q    IH   +K GF++     +SL+  Y+N G L
Sbjct: 371 LQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL 430

Query: 500 DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILN 557
              F      +   D+  W  +M+     GH  EA+  F+ + +  +   D   L  +++
Sbjct: 431 VACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVIS 490

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +C  +       S+H   +K    +++ V +A+I  Y +CG+I+ AR+ F  S N N + 
Sbjct: 491 ACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRN-LC 549

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +N +I A++ +     A+E+F  ++    +P++ T V ++SAC+  G++  G  +   +
Sbjct: 550 SWNCMISAFSQNKDGRRALELFCHIE---FEPNEITIVGILSACTQLGVLRHGKQIHGHV 606

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             +  +Q +      L DM S  G L+ A  + +  P + S   + S++S    H N
Sbjct: 607 -IRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSP-ERSVAAWNSMISAFGFHSN 661



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 185/402 (46%), Gaps = 28/402 (6%)

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G L     ++SL+  + R      + ++FD + Y+++  WN +++    N C    +  F
Sbjct: 2   GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLF 61

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   GV ++  T   VV       N      +HG   KTG  S  ++C++LI  Y   
Sbjct: 62  VELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKC 121

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+L +S     G E  D+ SW +MM    +  +  +++  F  +  + E+ D   L   +
Sbjct: 122 GELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAV 181

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFN--TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           ++ A +G     + IH + IKLG+   +     +++I  Y++C DI+ A + F +     
Sbjct: 182 SASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKE-MKYK 240

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN-LQPSQATFVSVMSACS-----HKGLVD 668
           D++ +N ++   A +  + EA ++  +M+L   +QP   T V ++  C+      +G   
Sbjct: 241 DIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAV 300

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            G  L + M   + +  S      L+DM S+   ++ A+HV + +P +     + +++SG
Sbjct: 301 HGLTLRREMGLDFSVTNS------LIDMYSKCKDVKRAEHVFKAIP-ERDLVSWNAMISG 353

Query: 729 CRIHGN--------KELGEWASE----KLLLLLPKNDAAHVL 758
              +G+        ++L +  S+     LL +LP  D++  L
Sbjct: 354 YSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFL 395



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%), Gaps = 9/226 (3%)

Query: 38  SFLRKDP------IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           + +R+DP      + L   +S   NL+    G  +HG  +K    +DI +QN LI MY +
Sbjct: 470 NLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGR 529

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       +F     RNL SW  ++SA  QN +    L+++  ++   F PNE  +  +
Sbjct: 530 CGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIE---FEPNEITIVGI 586

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +G    G  IH   ++ R++ N FV  ++ + Y+  G +  A ++F S     V
Sbjct: 587 LSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSV 646

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
             WN+MI  +     G +A+ +   M   G    K TFI+ L  CS
Sbjct: 647 AAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACS 692


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 171/570 (30%), Positives = 293/570 (51%), Gaps = 2/570 (0%)

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFI 250
           K G +  A R+F  +S  D   W  +I GY +     EAL +  +M  E G+ +D +   
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            A + C L +D + G  +HG  +++ +  S+ + +AL+DMY K+  +    +VF  M  +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +V+SW  +  G        +    F +   S    +  TF+I L+ C     L+ G ++ 
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             A+  GF     V ++L  M+ +CG +E   ++F+ +S +++ +W  +++       + 
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             ++ F  + ES V  N  TF  V+  C      +   Q+H  I+  G ++   + +S++
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIM 360

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   GQL +S    +   R D+ SW  +++     GH  EA  +   +   G KP E+
Sbjct: 361 TMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEF 420

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            L ++L++C  +   +  K +H +V+ +G      V SA+I+ Y KCG I+ A   FD +
Sbjct: 421 ALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAA 480

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            N +D++ +  +I  YA HG   E +++F+K+    L+P   TF+ V+SACSH GLVD G
Sbjct: 481 EN-DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLG 539

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
              F +M  +Y + PS + YGC++D+L R G L DA+H+IE MPF     V+ +LL  CR
Sbjct: 540 FHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACR 599

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +HG+ E G   +E++L L P     H+ L+
Sbjct: 600 VHGDVERGRRTAERILQLEPNCAGTHITLA 629



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 151/625 (24%), Positives = 284/625 (45%), Gaps = 28/625 (4%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D+   N  +    K G+ G   R+FD+M++++ +SWT ++S  +   +    L ++ +M
Sbjct: 47  TDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNM 106

Query: 137 KT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           +  +G   + F +    K C       +G  +H +A+K  +  + FVG ++L+ Y K G 
Sbjct: 107 RVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGK 166

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +    RVF+ +   +V  W A+I G    GY  EAL   S M    +  D YTF  AL+ 
Sbjct: 167 IFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+     + GR+IH   ++   + S  + N L  MY K   ++Y   +FE+M+ +DV+SW
Sbjct: 227 CADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSW 286

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            T+     +          F +   S   PN  TF+ ++  C  L  ++ G QL  L LH
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G     +V +S++ M+ +CG +  +  +F  ++ ++I +W+ +++GY      ++  + 
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFEL 406

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +   G +        V+  C      +   Q+H  ++  G      + S+LI  Y  
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCK 466

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G ++ +    + AE  D+ SW AM++     G++ E + +F  +   G +PD      +
Sbjct: 467 CGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGV 526

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFN-----TEVYVASA-------VIDAYAKCGDIKGA 603
           L++C+           H  ++ LGF+     ++ Y  S        +ID   + G +  A
Sbjct: 527 LSACS-----------HAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDA 575

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACS 662
               +      D +V++TL+ A   HG V       +  ++  L+P+ A T +++ +  +
Sbjct: 576 EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAE--RILQLEPNCAGTHITLANIYA 633

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSP 687
            KG   +   + K M S+ G+   P
Sbjct: 634 SKGKWREAADIRKLMKSK-GVIKEP 657



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 141/549 (25%), Positives = 246/549 (44%), Gaps = 41/549 (7%)

Query: 37  DSFLRKDPIFLA---KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           +S LR DP  L+   K+  L+ ++     G  +HG+ VK G  N +F+ + L+ MY+K G
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVN---YGELLHGYAVKTGLVNSVFVGSALLDMYTKNG 165

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
               G RVF EM  RN+VSWT I++  ++ G     L  + +M  +    + +     +K
Sbjct: 166 KIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALK 225

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C   GA  +G  IH  A+K   + + FV  ++   Y K G +     +F  +S  DV  
Sbjct: 226 ACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVS 285

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W  +I      G    A+     M    ++ ++YTF   + GC+ +A  + G Q+H LI+
Sbjct: 286 WTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALIL 345

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
              +  S+S+ N+++ MY K   +  +  +F  M  +D++SW+T+  G+ +  +  +   
Sbjct: 346 HLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFE 405

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L     + G +P     + +L  CG +  L+ G QL    L  G      V S+LI M+C
Sbjct: 406 LLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYC 465

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG++E A  +FD     +I +W  +++GY  +    +V+  F  I   G+  +  TF  
Sbjct: 466 KCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIG 525

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           V+  C            H  ++  GF                F  +   ++ S   E   
Sbjct: 526 VLSACS-----------HAGLVDLGFHY--------------FNAMSKKYQISPSKEH-- 558

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIH 572
              +G M+  L   G   +A      ++EA     D+ +  T+L +C   G  +R +   
Sbjct: 559 ---YGCMIDLLCRAGRLSDA----EHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTA 611

Query: 573 PFVIKLGFN 581
             +++L  N
Sbjct: 612 ERILQLEPN 620


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 195/702 (27%), Positives = 345/702 (49%), Gaps = 7/702 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I  L   ND+ +   L+  Y KCG      +VF EM ER+LVSW  ++S  + 
Sbjct: 79  GVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPF 181
              +   + ++V+MK  G  PN   V +++  C  M     G  IH + L+  + + + +
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAY 198

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++ FY +  D   + RVF  +   ++  WNA+I G+ + G   +AL + SSML EG
Sbjct: 199 VGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  T +  +Q C+      +G Q+H L I+  +   + I+NAL++MY  +  ++ ++
Sbjct: 258 IKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSW 317

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +   D   WN++   +       +  +LF K  L   + +  T +I+L  C  L 
Sbjct: 318 ALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLN 377

Query: 362 DLDL-GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           D  + G  L   A+  G   +  + ++L+ M+ +   +  A  VF+ +   ++ +WN ++
Sbjct: 378 DGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMI 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S +  +   A   + F  + ES ++ N  T   ++  C    +      IHG  IK G  
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLE 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SL + Y+N G    +        + D+ SW +++S+ +   +  +A+ +F+ +
Sbjct: 498 INTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM 557

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--LGFNTEVYVASAVIDAYAKCG 598
           +   E P+   +  IL SC  +      + +H +  +  +    +  +A+A I  YA+CG
Sbjct: 558 ISELE-PNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG 616

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A   F  +  +  ++ +N +I  Y  HG   +A   F +M     +P+  +F SV+
Sbjct: 617 KLQYAEKIF-CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVL 675

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GL   G  LF SM   +G+ P    YGC+VD+L R G+  +A   I  MP +P 
Sbjct: 676 SACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPD 735

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +++R+LLS C+I  N +L E    KL+ L P N    +LLS
Sbjct: 736 ASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLS 777



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/620 (23%), Positives = 297/620 (47%), Gaps = 7/620 (1%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L  Y  M++ G  P+   +  V+K C  + A   G  IH F   + +  +  VG ++++F
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDF 104

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G VA A +VF  +   D+  WNA+I GY  C    EA+ +   M   G+T +  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +  L  C  + +  +G++IHG  +R+ + +    +  AL+  Y++   +  + +VF  M 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLML 223

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++++SWN +  GF    +  +   L+   ++ G + + VT  ++++ C +   L LG+Q
Sbjct: 224 VRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 283

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           L  LA+    +++  + ++L+ M+   G++E + ++F+ V   +   WN ++S Y     
Sbjct: 284 LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICS 487
            A+ +  F  +    ++ +  T   ++  C    +  + G+ +H   +K+G     Y+ +
Sbjct: 344 HAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGN 403

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  YV   Q+  +         LD+ SW  M+SA        +A  +F  + E+  K 
Sbjct: 404 ALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKF 463

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           + Y + ++L  C         +SIH F IK G      + +++ + Y  CGD + A   F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     D++ +N+LI +Y  +    +A+ +F+ M ++ L+P+  T ++++++C+    +
Sbjct: 524 TRC-PQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHL 581

Query: 668 DKG-CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
             G CL   +   +  ++         + M +R G L+ A+ +   +  + S   + +++
Sbjct: 582 PLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMI 640

Query: 727 SGCRIHGNKELGEWASEKLL 746
           +G  +HG       A  ++L
Sbjct: 641 TGYGMHGRGRDATLAFAQML 660



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 240/528 (45%), Gaps = 15/528 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K    ND+F+ N L+ MYS  G       +F+ +   +   W  ++S+ I
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKNP 180
             G     + +++ M+      +   +  ++ +C  +   S +G  +H  A+K  IE + 
Sbjct: 340 GFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDA 399

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           ++G ++L+ Y K   + AA+ VF  +   DV  WN MI  +A   +  +A  +   M   
Sbjct: 400 YLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCES 459

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I  + YT ++ L  C   +D   GR IHG  I++ +E + S+  +L +MYI       A
Sbjct: 460 EIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAA 519

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F R   +D++SWN+L   + +N N G+   LF+  I S   PN VT   +L  C +L
Sbjct: 520 TNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQL 578

Query: 361 LDLDLGLQLQCLALHCGFLD-----EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             L LG   QCL  +    +     + ++ ++ I M+ RCG ++ A  +F  +  ++I +
Sbjct: 579 AHLPLG---QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS 635

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI-HGAI 474
           WN +++GY  +    D    F  + + G + N  +F  V+  C  S       Q+ H  +
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMV 695

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEA 533
              G +        ++      G    +  F N      D + W A++S+   + +N   
Sbjct: 696 RDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLL 755

Query: 534 VTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
            TIF  LVE     P  +IL  + N  AA G +     I  ++ + G 
Sbjct: 756 ETIFGKLVELEPSNPGNFIL--LSNIYAAAGLWSEVVQIRKWLRERGL 801



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 218/451 (48%), Gaps = 6/451 (1%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN++I  +         L+  + M   GIT D  T    L+ C  +     G +IH  I 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
             ++   + +  AL+D Y K   +  A KVF  M ++D++SWN L  G+       +   
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMF 392
           LF +   +G  PN  T   LL  CG++L+L LG ++    L  G  D +  V ++L+  +
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTF 451
            R  AV ++H VF  +  +NI +WN +++G+  N  D A  LK + ++   G++ +  T 
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGF-LNVGDCAKALKLYSSMLIEGIKFDAVTM 265

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C      ++  Q+H   IK    +  +I ++L+  Y + G L++S+   N    
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKS 570
            D A W +M+S+ +  G + EA+ +F  +     K D   +  +L+ C  +       + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H   +K G   + Y+ +A++  Y K   I  A+  F++     DVI +NT+I A+A   
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEK-MRGLDVISWNTMISAFAQSM 444

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             ++A E+F  M  + ++ +  T VS+++ C
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 6/334 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKS-RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +++D   +A  LSL  +L    + G  +H H +K G   D +L N L++MY K       
Sbjct: 359 IKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAA 418

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF++M   +++SW  ++SA  Q+       ++++ M  +    N + + S++  C   
Sbjct: 419 QYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDG 478

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
               FG SIH FA+K  +E N  +  S+   Y   GD  AA  +F      D+  WN++I
Sbjct: 479 SDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLI 538

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV- 277
             Y       +AL + + M+ E +  +  T IN L  C+ +A   +G+ +H    R EV 
Sbjct: 539 SSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVS 597

Query: 278 -ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL-F 335
            E   S+ NA I MY +   + YA K+F  +  + ++SWN +  G+  +   G+ A+L F
Sbjct: 598 LEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGR-GRDATLAF 656

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            + +  G +PN+V+F+ +L  C        GLQL
Sbjct: 657 AQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQL 690



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 200/403 (49%), Gaps = 9/403 (2%)

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN++    ++ KN     S + +    G  P+  T  ++L+ CG+L  +  G+++     
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
               +++  V ++L+  +C+CG V  A  VF  +  +++ +WN L+SGY    C  + + 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSLIKSY 493
            F  + ++G+  N  T   ++  C      ++  +IHG  ++ G F    Y+ ++L+  Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
           + F  + +   FS    R ++ SW A+++  ++ G   +A+ ++ S++  G K D   + 
Sbjct: 208 MRFDAVLSHRVFSLMLVR-NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
            ++ +CA  G  +    +H   IK     ++++ +A+++ Y+  G ++ +   F+ +  +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN-AVPT 325

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           +D  ++N++I +Y   G  +EA+ +F KM+L  ++    T   ++S C+    ++ G + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LNDGSIW 382

Query: 674 FKSMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            + + +   + G++        L+ M  ++  +  A++V E M
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 6/290 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G  +HG  +K G   +  L  +L  MY  CG       +F    +R+LVSW  ++S+ 
Sbjct: 482 VFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSY 541

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEK 178
           I+N      L ++  M +    PN   + +++  C  +     G  +H +  +  + +E 
Sbjct: 542 IKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM 600

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  + +  YA+ G +  AE++F ++ +  +  WNAMI GY   G G +A    + ML
Sbjct: 601 DASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQML 660

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGM 297
            +G   +  +F + L  CS       G Q+ H ++    +   ++    ++D+  +    
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHF 720

Query: 298 DYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRP 345
             A      M  + D   W  L        N     ++F K + L  S P
Sbjct: 721 SEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNP 770


>gi|302793011|ref|XP_002978271.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
 gi|300154292|gb|EFJ20928.1| hypothetical protein SELMODRAFT_465 [Selaginella moellendorffii]
          Length = 680

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 195/687 (28%), Positives = 341/687 (49%), Gaps = 20/687 (2%)

Query: 85  LIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
           L+ MY +CG      ++FD MA ERN   WT+++SA ++ G  +  L ++      G  P
Sbjct: 1   LLGMYVRCGSVESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 60

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN--PFVGCSVLNFYAKLGDVAAAER 201
           +E    +++  C    + + G  +H    +   +++  P +  S++  Y K G +  A +
Sbjct: 61  SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 120

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           V   I S DV  W  MI   +H G    A  ++  M  EG    K TF+  L+ C    D
Sbjct: 121 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACK---D 177

Query: 262 FDIGRQI----HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
               RQ+    HGLI    +E  + +  +L++MY +      A +VF ++  +DV SWN 
Sbjct: 178 HPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNC 237

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           L   +S      Q   L+ + +L G +P+ +T + ++  C  L DL+ G ++       G
Sbjct: 238 LLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSG 297

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           F  +  + ++LI  + RCG +E A  +F+ +  ++  TWN +++    +      +  F 
Sbjct: 298 FASDLMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQ 357

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            + + G+  +  T   V+  C      ++V   H  + ++GF     + ++LI +Y   G
Sbjct: 358 RMQQEGMAPSRVTLLTVLGLCGSVGEAKLV---HSCVRESGFEQDSEVKNTLITAYGRCG 414

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE--KPDEYILGTI 555
            L  + E      R   +SW AMM A   QG    A+ +FH +V+  +  +P    +   
Sbjct: 415 GLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILA 474

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           LNSC ++   +   S  P  +      + +V +A++D  A+CG +  A   F +   + D
Sbjct: 475 LNSCRSLADGKLVISSIPESL---VEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKD 531

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            +++ T++ A+A HG  + A+ +F+ M L     P + T VSV+SACSH GL+ +G  +F
Sbjct: 532 TVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQIF 591

Query: 675 KSMDSQYGMQ-PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            S  S +G+Q  S + YGC++D+L R G L++A+ ++    F  S  ++ +LL   ++ G
Sbjct: 592 ASTASDFGVQWRSLELYGCVIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVRG 651

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
           N+E G+ A+ K+L L P N AAHV+LS
Sbjct: 652 NEEAGKRAAVKVLELDPGNAAAHVILS 678



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/609 (24%), Positives = 281/609 (46%), Gaps = 23/609 (3%)

Query: 63  GTQVHGHIVKLGFTNDIF--LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G ++H  + + GF   I   L  +LI MY KCG      +V +++  R++  WT+++++ 
Sbjct: 81  GKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASL 140

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKN 179
              G+ D   ++   M   G  P++    +V++ C     A + G  +H    +  +E +
Sbjct: 141 SHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESD 200

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG S++N YA+ GD   A+ VF  I + DV  WN ++  Y+ C    +AL +   M+ 
Sbjct: 201 VGVGTSLVNMYARWGDAQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMML 260

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+  D+ T    +  C+ + D + G +IH  I  S     + +  ALI  Y +   ++ 
Sbjct: 261 EGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLEA 320

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++FE +  +D ++WNT+    +++ +P      F +    G  P+ VT   +L  CG 
Sbjct: 321 ALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGS 380

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           + +  L   +       GF  +  V ++LI  + RCG +  A  +F+ +  K  ++WN +
Sbjct: 381 VGEAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLPQALEIFEALPRKIESSWNAM 437

Query: 420 LSGYCFNCCDADVLKTFCNI--WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           +  Y         L+ F  +   E  ++ +  T    + +C    + ++V     +I ++
Sbjct: 438 MGAYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRSLADGKLV---ISSIPES 494

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSALVHQGHNHEAVTI 536
                G++ ++++      G LD++ EF +   +  D   W  M++A    GH+  A+ +
Sbjct: 495 LVEEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHGHSARALGL 554

Query: 537 FHS-LVEAGEKPDEYILGTILNSCAAIGAYQR-----TKSIHPFVIKLGFNTEVYVASAV 590
           F + L++ G  PDE  L ++L++C+  G   R       +   F ++   + E+Y    V
Sbjct: 555 FEAMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQIFASTASDFGVQW-RSLELY--GCV 611

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID   + G ++ A M    S  S   +++ TL+ A    G  +E       +K+  L P 
Sbjct: 612 IDLLGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVRG--NEEAGKRAAVKVLELDPG 669

Query: 651 QATFVSVMS 659
            A    ++S
Sbjct: 670 NAAAHVILS 678



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/418 (22%), Positives = 184/418 (44%), Gaps = 12/418 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+A   +  ++ ++R +G  +HG I + G  +D+ +  +L+ MY++ G       VF ++
Sbjct: 168 FMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDAQQAQEVFSQI 227

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R++ SW  +++A  +    +  L +Y +M   G  P+   + +V+ VC S+   E G 
Sbjct: 228 EARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGS 287

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH          +  +  +++ FY + G + AA  +F ++ + D   WN MI       
Sbjct: 288 RIHQQIASSGFASDLMLDTALITFYGRCGKLEAALEIFEALPARDNVTWNTMIASLNDHS 347

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               A+     M  EG+   + T +  L  C  V +    + +H  +  S  E    + N
Sbjct: 348 SPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGE---AKLVHSCVRESGFEQDSEVKN 404

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-- 343
            LI  Y +  G+  A ++FE +  K   SWN + G ++    P     LFH+ +      
Sbjct: 405 TLITAYGRCGGLPQALEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMI 464

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAH 402
           +P+  T  + L  C  L D  L +     ++    ++E+  V ++++ M  RCG+++ A 
Sbjct: 465 QPSVSTIILALNSCRSLADGKLVIS----SIPESLVEEDGFVQAAMVDMLARCGSLDDAS 520

Query: 403 SVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTF-CNIWESGVEVNGCTFFYVVETC 458
             F  +   K+   W  +++ +  +   A  L  F   + + G   +  T   V+  C
Sbjct: 521 EFFHKLGKNKDTVLWTTMVAAFARHGHSARALGLFEAMLLDGGGSPDEVTLVSVLSAC 578



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 10/334 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   + +  +LK    G+++H  I   GF +D+ L   LI  Y +CG     L
Sbjct: 263 VKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLEAAL 322

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ +  R+ V+W  ++++   +   +  +  +  M+  G  P+   + +V+ +C S+G
Sbjct: 323 EIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVG 382

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            ++    +H    +   E++  V  +++  Y + G +  A  +F ++       WNAM+G
Sbjct: 383 EAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLPQALEIFEALPRKIESSWNAMMG 439

Query: 220 GYAHCGYGFEALNVVSSM--LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
            YA  G    AL +   M  L + I     T I AL  C  +AD   G+ +   I  S V
Sbjct: 440 AYAAQGKPRAALELFHRMVKLEQMIQPSVSTIILALNSCRSLAD---GKLVISSIPESLV 496

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFH 336
           E    +  A++DM  +   +D A + F ++  +KD + W T+   F+ + +  +   LF 
Sbjct: 497 EEDGFVQAAMVDMLARCGSLDDASEFFHKLGKNKDTVLWTTMVAAFARHGHSARALGLFE 556

Query: 337 KFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQL 369
             +L  G  P+ VT   +L  C     L  GLQ+
Sbjct: 557 AMLLDGGGSPDEVTLVSVLSACSHAGLLHRGLQI 590


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 198/699 (28%), Positives = 331/699 (47%), Gaps = 27/699 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG + K G  +D+++   ++ +Y   G      +VF+EM +RN+VSWT ++     
Sbjct: 193 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 252

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE +  + +Y D                            G  I    +K  +E    V
Sbjct: 253 KGEPEEVIDIYKD-------------------------ESLGRQIIGQVVKSGLESKLAV 287

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++    +G+V  A  +F  +S  D   WN++   YA  G+  E+  + S M     
Sbjct: 288 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 347

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  T    L     V     GR IHGL+++   +  + + N L+ MY  +     A  
Sbjct: 348 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 407

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M  KD+ISWN+L   F  +        L    I SG   N+VTF+  L  C     
Sbjct: 408 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 467

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            + G  L  L +  G    + + ++L+ M+ + G +  +  V   +  +++  WN L+ G
Sbjct: 468 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 527

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSS 481
           Y  +      L  F  +   GV  N  T   V+  C    +    G+ +H  I+  GF S
Sbjct: 528 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 587

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SLI  Y   G L +S +  NG +  ++ +W AM++A  H GH  E + +   + 
Sbjct: 588 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 647

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G   D++     L++ A +   +  + +H   +KLGF  + ++ +A  D Y+KCG+I 
Sbjct: 648 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIG 707

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
                   S N + +  +N LI A   HG   E    F +M    ++P   TFVS+++AC
Sbjct: 708 EVVKMLPPSVNRS-LPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 766

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLVDKG   +  +   +G++P+ +   C++D+L R+G L +A+  I  MP +P+  V
Sbjct: 767 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 826

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +RSLL+ C+IHGN + G  A+E L  L P++D+ +VL S
Sbjct: 827 WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS 865



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/664 (25%), Positives = 310/664 (46%), Gaps = 45/664 (6%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K   LG Q+ G +VK G  + + ++N+LI+M    G   +   +FD+M+ER+ +SW  I 
Sbjct: 264 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +A  QNG  +   +++  M+      N   V +++ V   +   ++G  IH   +K+  +
Sbjct: 324 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
               V  ++L  YA  G    A  VF  + + D+  WN+++  + + G   +AL ++ SM
Sbjct: 384 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 443

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           +  G +++  TF +AL  C     F+ GR +HGL++ S +  +  I NAL+ MY K   M
Sbjct: 444 ISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 503

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             + +V  +M  +DV++WN L GG++E+++P +  + F    + G   N++T   +L  C
Sbjct: 504 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 563

Query: 358 GKLLDLDL---GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             LL  DL   G  L    +  GF  +E+V +SLI M+ +CG +  +  +F+ +  +NI 
Sbjct: 564 --LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN +L+    +    +VLK    +   GV ++  +F   +    +    +   Q+HG  
Sbjct: 622 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K GF    +I ++    Y   G++    +    +    + SW  ++SAL   G+  E  
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVC 741

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDA 593
             FH ++E G KP      ++L +C+  G   +  + +  + +  G    +     VID 
Sbjct: 742 ATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDL 801

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
             + G +                                +EA     KM    ++P+   
Sbjct: 802 LGRSGRL--------------------------------AEAETFISKMP---MKPNDLV 826

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLSRNGYLEDAKHVIEI 712
           + S++++C   G +D+G    K+ ++   ++P  D  Y    +M +  G  ED ++V + 
Sbjct: 827 WRSLLASCKIHGNLDRG---RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQ 883

Query: 713 MPFQ 716
           M F+
Sbjct: 884 MGFK 887



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/667 (24%), Positives = 313/667 (46%), Gaps = 36/667 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   VK      +   N LI MY+K G       +FD M  RN VSW  ++S  ++
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-EFGYSIHCFALKIRIEKNPF 181
            G +  G++ +  M   G  P+ F + S++  C   G+    G  +H F  K  +  + +
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVY 210

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y   G V+ + +VF  +   +V  W +++ GY+  G   E +++        
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK------ 264

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
                              D  +GRQI G +++S +E  +++ N+LI M      +DYA 
Sbjct: 265 -------------------DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F++M+++D ISWN++   +++N +  ++  +F          N  T S LL   G + 
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
               G  +  L +  GF     V ++L+ M+   G    A+ VF  +  K++ +WN L++
Sbjct: 366 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 425

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  +    D L   C++  SG  VN  TF   +  C   +  +    +HG ++ +G   
Sbjct: 426 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 485

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I ++L+  Y   G++  S        R D+ +W A++          +A+  F ++ 
Sbjct: 486 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 545

Query: 542 EAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
             G   +   + ++L++C   G   +R K +H +++  GF ++ +V +++I  YAKCGD+
Sbjct: 546 VEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDL 605

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             ++  F+   ++ ++I +N ++ A AHHG   E +++  KM+   +   Q +F   +SA
Sbjct: 606 SSSQDLFN-GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 664

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
            +   ++++G  L   +  + G +     +    DM S+ G + +   V++++P    P+
Sbjct: 665 AAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSKCGEIGE---VVKMLP----PS 716

Query: 721 VYRSLLS 727
           V RSL S
Sbjct: 717 VNRSLPS 723



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 12/431 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS+  ++  +  G  +HG +VK+GF + + + N L+ MY+  G       VF +M  ++L
Sbjct: 358 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 417

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SW  ++++ + +G     L +   M ++G   N     S +  C +    E G  +H  
Sbjct: 418 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 477

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +   +  N  +G ++++ Y K+G+++ + RV   +   DV  WNA+IGGYA      +A
Sbjct: 478 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 537

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALID 289
           L    +M  EG++ +  T ++ L  C L  D  + G+ +H  I+ +  E    + N+LI 
Sbjct: 538 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 597

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  +  +F  + ++++I+WN +    + + +  +   L  K    G   +  +
Sbjct: 598 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 657

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           FS  L    KL  L+ G QL  LA+  GF  +  + ++   M+ +CG +     +     
Sbjct: 658 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 717

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++ +WN L+S    +    +V  TF  + E G++    TF  ++  C           
Sbjct: 718 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACS---------- 767

Query: 470 IHGAIIKTGFS 480
            HG ++  G +
Sbjct: 768 -HGGLVDKGLA 777



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/462 (22%), Positives = 209/462 (45%), Gaps = 30/462 (6%)

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           G S +     GR +H L ++  V  S+   N LI+MY K   +  A  +F+ M  ++ +S
Sbjct: 81  GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS 140

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLA 373
           WNT+  G        +    F K    G +P+    + L+  CG+   +   G+Q+    
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G L +  V++++++++   G V  +  VF+ +  +N+ +W  L+ GY       +V+
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             +                         +++ +  QI G ++K+G  S   + +SLI   
Sbjct: 261 DIY-------------------------KDESLGRQIIGQVVKSGLESKLAVENSLISML 295

Query: 494 VNFGQLD-NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
            + G +D  ++ F   +ER D  SW ++ +A    GH  E+  IF  +    ++ +   +
Sbjct: 296 GSMGNVDYANYIFDQMSER-DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 354

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            T+L+    +   +  + IH  V+K+GF++ V V + ++  YA  G    A + F Q   
Sbjct: 355 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ-MP 413

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
           + D+I +N+L+ ++ + G   +A+ +   M  +    +  TF S ++AC      +KG +
Sbjct: 414 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 473

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           L   +    G+  +      LV M  + G + +++ V+  MP
Sbjct: 474 L-HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 514



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    ++ LS +  L     G Q+HG  VKLGF +D F+ N    MYSKCG  G  +++ 
Sbjct: 654 DQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 713

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VS 157
                R+L SW +++SA  ++G F+     + +M   G  P      S++  C     V 
Sbjct: 714 PPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVD 773

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGC-SVLNFYAKLGDVAAAE 200
            G + +      F L+  IE      C  V++   + G +A AE
Sbjct: 774 KGLAYYDMIARDFGLEPAIEH-----CICVIDLLGRSGRLAEAE 812


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 201/707 (28%), Positives = 345/707 (48%), Gaps = 37/707 (5%)

Query: 58  KSRVLGTQVHGHIVKLGFT---NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           ++  L  Q+H  ++K G T   ND F+ + L+ +Y+KCG      R+F +    N+ SW 
Sbjct: 65  RALPLALQLHADVIKRGPTFALND-FVISKLVILYAKCGASEPATRLFRDSPSPNVFSWA 123

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK- 173
            I+    + G  +  L  Y+ M+ +G  P+ F + +V+K C  +    FG  +H F +K 
Sbjct: 124 AIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKT 183

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           I +++  +V  S+++ Y K G V  A +VF  +S  +   WN+M+  YA  G   EA+ V
Sbjct: 184 IGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRV 243

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  +G+ +           C+       GRQ HGL +   +E    + +++++ Y K
Sbjct: 244 FREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFK 303

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A  VF  MA KDV++WN +  G+++     +   +       G R + VT S L
Sbjct: 304 VGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSAL 363

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L       DL LG++     +   F  +  V+S +I M+ +CG ++ A  VF  V  K+I
Sbjct: 364 LAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDI 423

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             WN +L+         + LK F  +    V  N  ++           N  + G     
Sbjct: 424 VLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSW-----------NSLIFGFFKNG 472

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +    +    +CSS        G + N            + +W  MMS LV  G    A
Sbjct: 473 QVAEARNMFAEMCSS--------GVMPN------------LITWTTMMSGLVQNGFGSGA 512

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  + + G +P+   + + L+ C ++   +  ++IH +V++   +  +++ ++++D 
Sbjct: 513 MMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDM 572

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG + GA+  F    ++ ++ VYN +I AYA HG   EA+ +F +M+   + P   T
Sbjct: 573 YAKCGSLDGAKCVFKMC-STKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHIT 631

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             SV+SACSH GL+ +G  +FK M S+  M+PS + YGCLV +L+ +G L++A   I  M
Sbjct: 632 LTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTM 691

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P  P   +  SLL+ C  + + EL ++ ++ LL L P N   +V LS
Sbjct: 692 PSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALS 738



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/583 (25%), Positives = 250/583 (42%), Gaps = 51/583 (8%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSF----------LRKDPIFLAKSLSLSENLK 58
           LF D PS +  +    I  L     FC ++           L  D   L   L     LK
Sbjct: 110 LFRDSPSPNVFSWAAIIG-LHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLK 168

Query: 59  SRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
               G  VH  +VK +G    +++  +L+ MY KCG      +VFDEM+ERN V+W  +V
Sbjct: 169 WVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMV 228

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
               QNG     ++++ +M+  G      A+      C +  A   G   H  A+   +E
Sbjct: 229 VTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLE 288

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +G S++NFY K+G +  AE VF +++  DV  WN ++ GYA  G   +AL +   M
Sbjct: 289 LDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVM 348

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG+  D  T    L   +   D  +G + H   ++++ E  + + + +IDMY K   M
Sbjct: 349 REEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRM 408

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A +VF  +  KD++ WNT+    +E    G+   LF +  L    PN V++       
Sbjct: 409 DCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSW------- 461

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV----SYKNI 413
                                       +SLI+ F + G V  A ++F  +       N+
Sbjct: 462 ----------------------------NSLIFGFFKNGQVAEARNMFAEMCSSGVMPNL 493

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW  ++SG   N   +  +  F  + + G+  N  +    +  C      +    IHG 
Sbjct: 494 ITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGY 553

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +++   S   +I +S++  Y   G LD +          ++  + AM+SA    G   EA
Sbjct: 554 VMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAREA 613

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           + +F  + + G  PD   L ++L++C+  G  +    +  +++
Sbjct: 614 LVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMV 656



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 142/632 (22%), Positives = 275/632 (43%), Gaps = 64/632 (10%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           G++++ CV   A      +H   +K       N FV   ++  YAK G    A R+F   
Sbjct: 55  GTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDS 114

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
            S +V  W A+IG +   G+  EAL     M  +G+  D +   N L+ C ++     G+
Sbjct: 115 PSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGK 174

Query: 267 QIHGLIIRS--EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            +H  ++++    EC + +  +L+DMY K   ++ A KVF+ M++++ ++WN++   +++
Sbjct: 175 GVHAFVVKTIGLKEC-VYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQ 233

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N    +   +F +  L G     V  S     C     +  G Q   LA+  G   +  +
Sbjct: 234 NGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVL 293

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            SS++  + + G +E A  VF N++ K++ TWN +++GY         L+  C + E G+
Sbjct: 294 GSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGL 353

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   ++     + +  +  + H   +K  F     + S +I  Y   G++D +  
Sbjct: 354 RFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARR 413

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +   + D+  W  M++A   QG + EA+ +F  +                        
Sbjct: 414 VFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQM------------------------ 449

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN---DVIVYNT 621
             + +S+ P V+           +++I  + K G +  AR  F +  +S    ++I + T
Sbjct: 450 --QLESVPPNVVSW---------NSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTT 498

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           ++     +G  S AM +F +M+   ++P+  +  S +S C+   L+  G  +   +  + 
Sbjct: 499 MMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYV-MRR 557

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
            +  S      ++DM ++ G L+ AK V + M       VY +++S    HG       A
Sbjct: 558 DLSQSIHIITSIMDMYAKCGSLDGAKCVFK-MCSTKELYVYNAMISAYASHGQ------A 610

Query: 742 SEKLLLLLPKNDAAHVLLSKRKRQREGNLLDH 773
            E L+L              ++ ++EG + DH
Sbjct: 611 REALVLF-------------KQMEKEGIVPDH 629



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 230/513 (44%), Gaps = 20/513 (3%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNA 286
           EA+N ++ M    + +    +   LQGC       +  Q+H  +I+     +++  +++ 
Sbjct: 34  EAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISK 93

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+ +Y K    + A ++F      +V SW  + G     GF E    G     + K    
Sbjct: 94  LVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFG-----YIKMQQD 148

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFCRCGAVEM 400
           G  P++     +L+ CG L  +  G  +    +    L E   V +SL+ M+ +CGAVE 
Sbjct: 149 GLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVED 208

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VFD +S +N  TWN ++  Y  N  + + ++ F  +   GVEV           C  
Sbjct: 209 AGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACAN 268

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGA 519
           SE      Q HG  +  G      + SS++  Y   G ++ +   F N A + D+ +W  
Sbjct: 269 SEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVK-DVVTWNL 327

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++     G   +A+ +   + E G + D   L  +L   A           H + +K  
Sbjct: 328 VVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKND 387

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F  +V V+S +ID YAKCG +  AR  F       D++++NT++ A A  GL  EA+++F
Sbjct: 388 FEGDVVVSSGIIDMYAKCGRMDCARRVFS-CVRKKDIVLWNTMLAACAEQGLSGEALKLF 446

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +M+L ++ P+  ++ S++      G V +   +F  M S  G+ P+   +  ++  L +
Sbjct: 447 FQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSS-GVMPNLITWTTMMSGLVQ 505

Query: 700 NGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
           NG+   A  V   M     +P+     S LSGC
Sbjct: 506 NGFGSGAMMVFREMQDVGIRPNSMSITSALSGC 538



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 78/194 (40%), Gaps = 3/194 (1%)

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-- 579
           S+L   G   EAV     +          I GT+L  C    A      +H  VIK G  
Sbjct: 24  SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPT 83

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F    +V S ++  YAKCG  + A   F  S + N V  +  +I  +   G   EA+  +
Sbjct: 84  FALNDFVISKLVILYAKCGASEPATRLFRDSPSPN-VFSWAAIIGLHTRTGFCEEALFGY 142

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            KM+   L P      +V+ AC     V  G  +   +    G++        LVDM  +
Sbjct: 143 IKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGK 202

Query: 700 NGYLEDAKHVIEIM 713
            G +EDA  V + M
Sbjct: 203 CGAVEDAGKVFDEM 216


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 180/640 (28%), Positives = 323/640 (50%), Gaps = 20/640 (3%)

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN  FD+G                 A  S++++C    +   G  +        +  +  
Sbjct: 144 QNSNFDLG-----------------AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGI 186

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G  ++  Y K GD+     VF  +S   +  WN MI  Y+  G   E++N+   ML  G
Sbjct: 187 LGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELG 246

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  + YTF + L+  + VA  + GRQ+HGLI +       ++VN+LI  Y     +  A 
Sbjct: 247 IKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQ 306

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F+ + D+DVISWN++  G+ +N    +   +F K ++ G   +  T   +   C  + 
Sbjct: 307 KLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIG 366

Query: 362 DLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            L LG  L   ++    LD E    ++L+ M+ +CG +  A  VF+ +  K + +W  ++
Sbjct: 367 TLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMI 426

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY         +K F  +   GV  +      ++  C  + N +    +H  I +    
Sbjct: 427 TGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLE 486

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +  ++ ++L   Y   G + ++ +  +  ++ D+ SW  M+         +EA+T+F  +
Sbjct: 487 TNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM 546

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            +   KPD   +  IL +CA++ A  + + IH + ++ G++ + YV +AV+D Y KCG +
Sbjct: 547 -QRESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLL 605

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             AR  FD   N  D++ +  +I  Y  HG  SEA+  F++M++  ++P + +F+S++ A
Sbjct: 606 VLARSLFDMIPN-KDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYA 664

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GL+D+G  +F  M  +  ++P+ + Y C+VD+L+R G L  A   I+ MP +P  T
Sbjct: 665 CSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDAT 724

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++ +LL GCRIH + +L E  +E++  L P+N   +VLL+
Sbjct: 725 IWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLA 764



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 152/643 (23%), Positives = 281/643 (43%), Gaps = 9/643 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L    KS   G +V   I   G   D  L   L+ MY KCG    G  VFD+++E  +
Sbjct: 157 LQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKI 216

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
             W L++S    +G +   + ++  M   G  PN +   S++K   ++   E G  +H  
Sbjct: 217 FLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGL 276

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             K+       V  S+++FY     V  A+++F  ++  DV  WN+MI GY   G     
Sbjct: 277 ICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRG 336

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALID 289
           + +   ML  G+ +D  T +N    C+ +    +G+ +H   I+ + ++  +   N L+D
Sbjct: 337 IEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLD 396

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ A +VFERM +K V+SW ++  G+           LF +    G  P+   
Sbjct: 397 MYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYA 456

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            + +L  C    +L  G  +              V+++L  M+ +CG+++ AH VF ++ 
Sbjct: 457 VTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMK 516

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            K++ +WN ++ GY  N    + L  F  +     + +G T   ++  C          +
Sbjct: 517 KKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGRE 575

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IHG  ++ G+S   Y+ ++++  YV  G L  +    +     D+ SW  M++     G+
Sbjct: 576 IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGY 635

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYV 586
             EA+  F+ +   G +PDE    +IL +C+  G       I   + K   +  N E Y 
Sbjct: 636 GSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHY- 694

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            + ++D  A+ G++  A           D  ++  L+     H  V  A ++ +  ++  
Sbjct: 695 -ACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAE--RIFE 751

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           L+P    +  +++    +    +     +    Q G++ +P C
Sbjct: 752 LEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGC 794


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 197/705 (27%), Positives = 349/705 (49%), Gaps = 42/705 (5%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 84  GQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVR 143

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H +  K  +    
Sbjct: 144 CRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCV 203

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I    V  WNA++ GY   G   EA+ ++S+M  E
Sbjct: 204 FVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNE 263

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   ++YA
Sbjct: 264 GIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA 323

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH--KFILSGSRP-NHVTFSILLRQC 357
             +F+RM +KDV++WN L  G+ +    G      H  + +  G+   + VT S L+   
Sbjct: 324 EMIFDRMIEKDVVTWNLLISGYVQQ---GLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAA 380

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +  +L LG ++QC  +  GF+ +  + S+ + M+ +CG++  A  VF++   K++  WN
Sbjct: 381 ARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWN 440

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            LL+ Y       + L+ F  +   GV  N  T+  V+ +  R+      GQ++ A    
Sbjct: 441 TLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRN------GQVNEA---- 490

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                                 D   +  +     ++ SW  MM+ LV  G + EA+   
Sbjct: 491 ---------------------KDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYL 529

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAK 596
             + E+G + + + +   L++CA + +    +SIH ++I+    ++ V + ++++D YAK
Sbjct: 530 RKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAK 589

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFV 655
           CGDI  A   F     S ++ +YN +I AYA +G V EA  ++  + +   ++P   T  
Sbjct: 590 CGDISKAERVFGSKLYS-ELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITIT 648

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           +V+SAC H G +++   +F  M S++ M+P  + YG +VD+L+  G  E A  +IE MP+
Sbjct: 649 NVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPY 708

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +P   + +SLL+ C      EL E+ S  LL   P+N   +V +S
Sbjct: 709 KPDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNYVTIS 753



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 224/490 (45%), Gaps = 24/490 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL +V+ M    + +    +   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 48  EALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHARILKNGDFYAKNEYIETK 107

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F + + +
Sbjct: 108 LVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVEGALMG-----FVEMLEN 162

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P++     + + CG L     G  +       G  D   V SSL  M+ +CG ++ A
Sbjct: 163 GLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDA 222

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  + +  WN L+ GY  N  + + ++    +   G+E    T      + C S
Sbjct: 223 RKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTV-----STCLS 277

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  M G     Q H   I  G      + +S++  Y   G ++ +    +     D+ +
Sbjct: 278 ASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVT 337

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG   +A+ +   +       D   L +++++ A     +  K +  + I
Sbjct: 338 WNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCI 397

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           + GF +++ +AS  ++ YAKCG I  A+  F+ +    D+I++NTL+ AYA  GL  EA+
Sbjct: 398 RHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTV-EKDLILWNTLLAAYAEPGLSGEAL 456

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L  + P+  T+ SV+ +    G V++   +F  M S  G+ P+   +  +++ 
Sbjct: 457 RLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSS-GISPNLISWTTMMNG 515

Query: 697 LSRNGYLEDA 706
           L +NG  E+A
Sbjct: 516 LVQNGCSEEA 525



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/520 (21%), Positives = 208/520 (40%), Gaps = 72/520 (13%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 270 VTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDR 329

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  +  + M   M+      +   + S+M         + G
Sbjct: 330 MIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLG 389

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++     +  +  + +  YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 390 KEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEP 449

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  EG+  +  T+ + +   SL+ +                      V
Sbjct: 450 GLSGEALRLFYEMQLEGVPPNVITWNSVI--LSLLRNGQ--------------------V 487

Query: 285 NALIDMYI--KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           N   DM++  +SSG+             ++ISW T+  G  +N    +      K   SG
Sbjct: 488 NEAKDMFLQMQSSGI-----------SPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESG 536

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMA 401
            R N  + ++ L  C  L  L  G  +    +         ++ +SL+ M+ +CG +  A
Sbjct: 537 LRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKA 596

Query: 402 HSVFDNVSYKNITTWNELLSGYCF--NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
             VF +  Y  +  +N ++S Y    N  +A  L    +  + G+E +  T   V+  C 
Sbjct: 597 ERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRSLD-EDVGIEPDNITITNVLSAC- 654

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                   G I+ AI         +I + ++               S  A +  +  +G 
Sbjct: 655 -----HHAGDINQAI---------HIFTDMV---------------SKHAMKPCLEHYGL 685

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           M+  L   G   +A+ +     E   KPD  ++ ++L SC
Sbjct: 686 MVDLLASAGETEKALRLIE---EMPYKPDARMIQSLLASC 722



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 146/333 (43%), Gaps = 41/333 (12%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+  +S +    +  LG +V  + ++ GF +DI L +  + MY+KCG      +VF
Sbjct: 369 DCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVF 428

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +   E++L+ W  +++A  + G     L+++ +M+  G  PN     SV+          
Sbjct: 429 NSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVI---------- 478

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG----CWNAMI 218
                      + + +N              G V  A+ +F  + S  +      W  M+
Sbjct: 479 -----------LSLLRN--------------GQVNEAKDMFLQMQSSGISPNLISWTTMM 513

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G    G   EA+  +  M   G+ ++ ++   AL  C+ +A    GR IHG IIR++  
Sbjct: 514 NGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHH 573

Query: 279 -CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             S+SI  +L+DMY K   +  A +VF      ++  +N +   ++   N  +  +L+  
Sbjct: 574 SSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRS 633

Query: 338 FILS-GSRPNHVTFSILLRQCGKLLDLDLGLQL 369
                G  P+++T + +L  C    D++  + +
Sbjct: 634 LDEDVGIEPDNITITNVLSACHHAGDINQAIHI 666



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 4/137 (2%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS   NL S   G  +HG+I++    ++ + ++ +L+ MY+KCG  
Sbjct: 534 ESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDI 593

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKV 154
               RVF       L  +  ++SA    G       +Y  +  + G  P+   + +V+  
Sbjct: 594 SKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSA 653

Query: 155 CVSMGASEFGYSIHCFA 171
           C   G  +   +IH F 
Sbjct: 654 CHHAG--DINQAIHIFT 668



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%)

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG- 579
           +S+L  +G   EA+ +   +     +    I G IL  C         + IH  ++K G 
Sbjct: 37  VSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHARILKNGD 96

Query: 580 -FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
            +    Y+ + ++  YAKC  ++ A++ F +   + +V  +  +I      GLV  A+  
Sbjct: 97  FYAKNEYIETKLVIFYAKCDALEVAQLLFSK-LRARNVFSWAAIIGVRCRIGLVEGALMG 155

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD-------SQYGMQPSPDCYG 691
           F +M    L P      +V  AC        G L +           ++ G+        
Sbjct: 156 FVEMLENGLFPDNFVVPNVCKAC--------GALQWSRFGRGVHGYVAKAGLHDCVFVAS 207

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP 714
            L DM  + G L+DA+ V + +P
Sbjct: 208 SLADMYGKCGLLDDARKVFDEIP 230


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 181/644 (28%), Positives = 336/644 (52%), Gaps = 5/644 (0%)

Query: 131 KMYVDMKTNGFMP--NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
           + ++  +T+   P  N +  GS+++ C+  G    G  +HC  +K     + F    +LN
Sbjct: 28  RSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLN 87

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
           FY K   +  A ++F  +   +   +  +I GY+ C    EA+ + S +  EG  ++ + 
Sbjct: 88  FYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           F   L+         +G  +H  + +   +    +  ALID Y      + A +VF+ + 
Sbjct: 148 FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE 207

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            KD++SW  +   + EN+   ++  LF +  + G +PN+ TF+ +L+ C  L   ++G  
Sbjct: 208 YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKA 267

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +   A    +L+E  V   LI ++ + G V+ A  VF+ +   ++  W+ +++ Y  +  
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + ++ FC +    V  N  T   +++ C    + Q+  QIH  ++K G     ++ ++
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNA 387

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G+++NS +  + +      SW  ++   V  G+  +A+ +F  ++E   +  
Sbjct: 388 LMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGT 447

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           E    ++L +CA I A +    IH   +K  ++    V +A+ID YAKCG+IK AR+ FD
Sbjct: 448 EVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFD 507

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                +D + +N +I  Y+ HGL  EA++ F+ M     +P + TFV ++SACS+ GL+D
Sbjct: 508 M-LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLD 566

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G   FKSM  +Y ++P  + Y C+V +L R+G+L+ A  ++  +PF+PS  V+R+LLS 
Sbjct: 567 RGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--RKRQREGNL 770
           C IH + ELG  +++++L + P+++A HVLLS      +R GN+
Sbjct: 627 CVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNV 670



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 218/416 (52%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P   +  L L  + +   LG  VH  + KLGF +D F+   LI  YS CGY     +VF
Sbjct: 144 NPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +  +++VSWT +V+  ++N  F+  LK++  M+  GF PN F   SV+K CV +    
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G ++H  A K    +  FVG  +++ Y K GDV  A +VF  +  DDV  W+ MI  YA
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EA+ +   M    +  +++T  + LQ C+ + D  +G QIH  +++  ++ ++ 
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+DMY K   M+ + ++F    +   +SWNT+  G+ +  N  +   LF   +   
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            +   VT+S +LR C  +  L+ G Q+  L++   +     V ++LI M+ +CG ++ A 
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            VFD +   +  +WN ++SGY  +    + LKTF ++ E+  + +  TF  ++  C
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSAC 559



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 241/508 (47%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+K G   D+F  N L+  Y K        ++FDEM +RN VS+  ++    Q
Sbjct: 63  GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
              F   + ++  ++  G   N F   +V+K+ VS   ++ G+S+H    K+  + + FV
Sbjct: 123 CLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFV 182

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y+  G    A +VF +I   D+  W  M+  Y       E+L + S M   G 
Sbjct: 183 GTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGF 242

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + +TF + L+ C  +  F++G+ +HG   ++     + +   LID+YIKS  +D A +
Sbjct: 243 KPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQ 302

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE M   DVI W+ +   +++++   +   +F +       PN  T + LL+ C  L+D
Sbjct: 303 VFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVD 362

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L LG Q+ C  +  G      V+++L+ M+ +CG +E +  +F         +WN ++ G
Sbjct: 363 LQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVG 422

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y         L  F ++ E  V+    T+  V+  C      +   QIH   +KT +   
Sbjct: 423 YVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKN 482

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y   G + ++    +     D  SW AM+S     G   EA+  F S++E
Sbjct: 483 TVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLE 542

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKS 570
              KPD+     IL++C+  G   R ++
Sbjct: 543 TECKPDKVTFVGILSACSNAGLLDRGQA 570



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 2/277 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  L    +L    LG Q+H H+VK+G   ++F+ N L+ MY+KCG     L++F E  
Sbjct: 350 LASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP 409

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
               VSW  ++   +Q G  +  L ++ DM        E    SV++ C  + A E G  
Sbjct: 410 NCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQ 469

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH  ++K   +KN  VG ++++ YAK G++  A  VF  +   D   WNAMI GY+  G 
Sbjct: 470 IHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGL 529

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVN 285
             EAL    SML      DK TF+  L  CS     D G+     ++   ++E       
Sbjct: 530 YGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYT 589

Query: 286 ALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
            ++ +  +S  +D A K+   +  +  V+ W  L   
Sbjct: 590 CMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSA 626


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 206/780 (26%), Positives = 373/780 (47%), Gaps = 58/780 (7%)

Query: 5   KRAFLFADKPSCHFHATRK----------RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLS 54
           K  F  + KPS   H  +           R+  LC N +      L  +  F  ++L + 
Sbjct: 12  KVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDF--RNLRIG 69

Query: 55  ENLKSRVL-----------GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRV 101
             +   +L           G Q+H  I+K G  +  + +++  L+  Y+KC        +
Sbjct: 70  PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL 129

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F ++  RN+ SW  I+    + G  +  L  +V+M  N   P+ F V +V K C ++  S
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
            FG  +H + +K  +E   FV  S+ + Y K G +  A +VF  I   +   WNA++ GY
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G   EA+ + S M  +G+   + T    L   + +   + G+Q H + I + +E   
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +  +L++ Y K   ++YA  VF+RM +KDV++WN +  G+ +         +     L 
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             + + VT + L+    +  +L LG ++QC  +   F  +  + S+++ M+ +CG++  A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD+   K++  WN LL+ Y  +    + L+ F  +   GV  N  T+  ++ +  R+
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
                 GQ+  A                      F Q+ +S    N      + SW  MM
Sbjct: 490 ------GQVDEA-------------------KDMFLQMQSSGIIPN------LISWTTMM 518

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGF 580
           + +V  G + EA+     + E+G +P+ + +   L++CA + +    ++IH ++I+ L  
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           ++ V + ++++D YAKCGDI  A   F     S ++ + N +I AYA +G + EA+ ++ 
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS-ELPLSNAMISAYALYGNLKEAIALYR 637

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            ++   L+P   T  +V+SAC+H G +++   +F  + S+  M+P  + YG +VD+L+  
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASA 697

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G  E A  +IE MPF+P   + +SL++ C      EL ++ S KLL   P+N   +V +S
Sbjct: 698 GETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTIS 757


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 212/717 (29%), Positives = 363/717 (50%), Gaps = 22/717 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR-VFDEMAERNLVSWTLIVSAA 120
           LG Q+HG I K  + +D+ + N LI+MY  C       R VFD +  RN +SW  I+S  
Sbjct: 192 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 251

Query: 121 IQNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            + G+      ++  M+  G    F PNE+  GS++    S  + +FG  +    +  R+
Sbjct: 252 SRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACS--SVDFGLCV-LEQMLARV 308

Query: 177 EKNPF-----VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           EK+ F     V  ++++ +A+ G    A+ +F  +   +V   N ++ G      G  A 
Sbjct: 309 EKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 368

Query: 232 NVVSSML-FEGITMDKYT-FINALQGCSLVAD-FDIGRQIHGLIIRSEV-ECSISIVNAL 287
            V   M    GI  D Y   ++A    S++ +    GR++H  +IR+ + +  ++I N L
Sbjct: 369 KVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 428

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ++MY KS  +  A  VFE M +KD +SWN+L  G  +N+     A  FH+   +GS P++
Sbjct: 429 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSN 488

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T    L  C  L  + LG Q+ C  L  G   + +V+++L+ ++   G       VF  
Sbjct: 489 FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 548

Query: 408 VSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           +   +  +WN ++     +    +  +K F  +   G  ++  TF  ++         ++
Sbjct: 549 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEV 608

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALV 525
             QIH  ++K   S    I ++L+  Y   G+++   + F+  +E  D  SW +M+S  +
Sbjct: 609 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 668

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
           H    H+A+ +   +++ G++ D +   TIL++CA++   +R   +H   I+    ++V 
Sbjct: 669 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 728

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V SA++D Y+KCG I  A   F+      +V  +N++I  YA HG   +A+++F +M L 
Sbjct: 729 VGSALVDMYSKCGRIDYASRFFEL-MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 787

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
              P   TFV V+SACSH G V++G   FKSM   Y + P  + + C+VD+L R G L++
Sbjct: 788 GQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 847

Query: 706 AKHVIEIMPFQPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLLS 760
               I  MP +P+  ++R++L   CR +G N ELG  A+E LL L P+N   +VLL+
Sbjct: 848 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 904



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 180/694 (25%), Positives = 327/694 (47%), Gaps = 32/694 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   +K GF  ++FL N LI +Y + G  G   ++FDEM+ RNLV+W  ++S   QNG
Sbjct: 92  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 151

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNPFV 182
           + D     + DM   GF+PN +A GS ++ C   G S  + G  IH    K R   +  V
Sbjct: 152 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 211

Query: 183 GCSVLNFYAKLGDVA-AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              +++ Y    D A  A  VF  I   +   WN++I  Y+  G    A ++ SSM  EG
Sbjct: 212 CNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEG 271

Query: 242 ITM----DKYTFINALQGCSLVADFD--IGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +      ++YTF + +       DF   +  Q+   + +S     + + +AL+  + +  
Sbjct: 272 LGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFG 331

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILL 354
             D A  +FE+M  ++V+S N L  G  + K     A +FH+   L G   N  ++ +LL
Sbjct: 332 LTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG--INSDSYVVLL 389

Query: 355 RQCGKLLDLD----LGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVS 409
               +   L+     G ++    +  G  D +  + + L+ M+ + GA+  A SVF+ + 
Sbjct: 390 SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 449

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG- 468
            K+  +WN L+SG   N C  D  ++F  +  +G   +  T    + +C  S    M+G 
Sbjct: 450 EKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCA-SLGWIMLGE 508

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH-Q 527
           QIH   +K G  +   + ++L+  Y   G      +  +     D  SW +++ AL   +
Sbjct: 509 QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSE 568

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               +AV  F  ++  G          IL++ +++  ++ +  IH  V+K   + +  + 
Sbjct: 569 ASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 628

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A++  Y KCG++      F +   + D + +N++I  Y H+ L+ +AM++   M     
Sbjct: 629 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ 688

Query: 648 QPSQATFVSVMSACSHKGLVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +    TF +++SAC+    +++G     C +   ++S   +  +      LVDM S+ G 
Sbjct: 689 RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSA------LVDMYSKCGR 742

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           ++ A    E+MP + +   + S++SG   HG+ E
Sbjct: 743 IDYASRFFELMPLR-NVYSWNSMISGYARHGHGE 775



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 199/404 (49%), Gaps = 3/404 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           + R  G +VH H+++ G   N + + N L+ MY+K G       VF+ M E++ VSW  +
Sbjct: 400 EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 459

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S   QN   +   + +  M+  G MP+ F + S +  C S+G    G  IHC  LK+ +
Sbjct: 460 ISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGL 519

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVS 235
           + +  V  ++L  YA+ G      +VF  +   D   WN++IG  +       +A+    
Sbjct: 520 DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 579

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+  G  + + TFIN L   S ++  ++  QIH L+++  +    +I NAL+  Y K  
Sbjct: 580 QMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG 639

Query: 296 GMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            M+   K+F RM++ +D +SWN++  G+  N+   +   L    +  G R +  TF+ +L
Sbjct: 640 EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATIL 699

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  +  L+ G+++    +      +  V S+L+ M+ +CG ++ A   F+ +  +N+ 
Sbjct: 700 SACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVY 759

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +WN ++SGY  +      LK F  +   G   +  TF  V+  C
Sbjct: 760 SWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSAC 803



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 197/389 (50%), Gaps = 8/389 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  +LS   +L   +LG Q+H   +KLG   D+ + N L+A+Y++ G F   L+VF  M 
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 107 ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           E + VSW  ++ A +         +K ++ M   G+  +     +++    S+   E  +
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 610

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHC 224
            IH   LK  +  +  +G ++L+ Y K G++   E++F  +S + D   WN+MI GY H 
Sbjct: 611 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 670

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +A+++V  M+ +G  +D +TF   L  C+ VA  + G ++H   IR+ +E  + + 
Sbjct: 671 ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG 730

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +AL+DMY K   +DYA + FE M  ++V SWN++  G++ + +  +   LF + +L G  
Sbjct: 731 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 790

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           P+HVTF  +L  C  +  ++ G +  + ++            S ++ +  R G ++    
Sbjct: 791 PDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGD 850

Query: 404 VFDNVSYK-NITTWNELLSGYCFNCCDAD 431
             +++  K N+  W  +L      CC A+
Sbjct: 851 FINSMPMKPNVLIWRTVLGA----CCRAN 875



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 245/523 (46%), Gaps = 21/523 (4%)

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           SE    +H  ++K     N F+  +++N Y ++GD+ +A+++F  +S+ ++  W  +I G
Sbjct: 87  SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 146

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEVE 278
           Y   G   EA      M+  G   + Y F +AL+ C  S  +   +G QIHGLI ++   
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206

Query: 279 CSISIVNALIDMYIKSSGMDY---AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             + + N LI MY   S +D    A  VF+ +  ++ ISWN++   +S   +      LF
Sbjct: 207 SDVVVCNVLISMY--GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLF 264

Query: 336 HKFILSGS----RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL--HCGFLDEENVTSSLI 389
                 G     +PN  TF  L+      +D  L +  Q LA     GFL +  V+S+L+
Sbjct: 265 SSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALV 324

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
             F R G  + A ++F+ +  +N+ + N L+ G           K F  + +  V +N  
Sbjct: 325 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 383

Query: 450 TFFYVV----ETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICSSLIKSYVNFGQLDNSFE 504
           ++  ++    E     E ++   ++H  +I+TG +     I + L+  Y   G + ++  
Sbjct: 384 SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 443

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                   D  SW +++S L     + +A   FH +   G  P  + L + L+SCA++G 
Sbjct: 444 VFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGW 503

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
               + IH   +KLG +T+V V++A++  YA+ G        F       D + +N++I 
Sbjct: 504 IMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL-MPEYDQVSWNSVIG 562

Query: 625 AYAH-HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           A +     VS+A++ F +M       S+ TF++++SA S   L
Sbjct: 563 ALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 605



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 206/441 (46%), Gaps = 33/441 (7%)

Query: 248 TFINALQG--CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + IN  QG  CS     +  R++H   I+     ++ + N LI++Y++   +  A K+F+
Sbjct: 76  SLINRYQGSCCS-----EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 130

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK--LLDL 363
            M+++++++W  L  G+++N  P +  + F   + +G  PNH  F   LR C +      
Sbjct: 131 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 190

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSG 422
            LG+Q+  L     +  +  V + LI M+  C  +   A SVFD +  +N  +WN ++S 
Sbjct: 191 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISV 250

Query: 423 YCFNCCDADVLKTFCNIWESGV----EVNGCTFFYVVETCCRSEN------QQMVGQIHG 472
           Y            F ++ + G+    + N  TF  ++ T C S +      +QM+ ++  
Sbjct: 251 YSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVE- 309

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
              K+GF    Y+ S+L+  +  FG  D++          ++ S   +M  LV Q     
Sbjct: 310 ---KSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 366

Query: 533 AVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQ----RTKSIHPFVIKLGFN-TEVYV 586
           A  +FH + +  G   D Y++  +L++ +     +    + + +H  VI+ G N  +V +
Sbjct: 367 AAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAI 424

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            + +++ YAK G I  A   F+      D + +N+LI     +    +A E F +M+   
Sbjct: 425 GNGLVNMYAKSGAIADACSVFELMVE-KDSVSWNSLISGLDQNECSEDAAESFHRMRRTG 483

Query: 647 LQPSQATFVSVMSACSHKGLV 667
             PS  T +S +S+C+  G +
Sbjct: 484 SMPSNFTLISTLSSCASLGWI 504



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 61/125 (48%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS   ++ +   G +VH   ++    +D+ + + L+ MYSKCG   +  R
Sbjct: 689 RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASR 748

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F+ M  RN+ SW  ++S   ++G  +  LK++  M  +G  P+      V+  C  +G 
Sbjct: 749 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 808

Query: 161 SEFGY 165
            E G+
Sbjct: 809 VEEGF 813


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 200/743 (26%), Positives = 365/743 (49%), Gaps = 46/743 (6%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R +       +    NL     G   H  I++ GF + +F+ N+L+ MY KCG   
Sbjct: 221 DGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVD 280

Query: 97  WGLRVFDEMAERNLVS---WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
               VF++M  R+++S   WT+I++A   NG       ++  M   G +PN+    +V++
Sbjct: 281 HARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLR 340

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVG 212
            C ++   E    I      + +E +  +G + ++ +AKLGD+AAA  VF ++ SS +V 
Sbjct: 341 ACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVV 397

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W  MI  YA  G+   A ++   M  E    +  TF+  +  C    D     QIH  +
Sbjct: 398 SWTVMIWAYAQQGFIRAAFDLYKRMDCEP---NAVTFMAVMDSCLRPEDLPRAEQIHAHM 454

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           + S  E  + +   L+ MY K   +D A+ +FE + ++ V++WN++   F+ N    ++ 
Sbjct: 455 VASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSL 514

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKL-----------LDLDLGLQLQCLALHCGFLDE 381
            L+ + +L G++P+ +T+  +L  C  +           L+LD+  +             
Sbjct: 515 KLYERMLLEGTKPDKITYLAVLDACQSVSEARRYAATFELELDIAAR------------- 561

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELLSGYCFNCCDADVLKTFCNIW 440
               ++ +  + RCG+++ A + FD + +KN   TWN ++SG   +      L+ F  + 
Sbjct: 562 ----NAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALECFWKME 617

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             GV  N  T+   +E C   ++     Q+H  I+         + +++I  Y   G LD
Sbjct: 618 LEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEAN-LSNAVINMYGKCGSLD 676

Query: 501 NSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +  EF    ER D+ SW  M++     G   +A+  F  +   G  PD       +++C
Sbjct: 677 EAMDEFVKMPER-DVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDAC 735

Query: 560 AAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
            ++ +    K+IH  V         +  VA+A++  YA+CG +  A+  F +S +S +++
Sbjct: 736 GSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRS-HSRNLV 794

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV-DKGCLLFKS 676
            ++ LI A A HG  +EA+++F +M+L   +P   TF ++++ACS +G+V D G  +F +
Sbjct: 795 TWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGGRRIFDA 854

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           +   Y +  S + YGC+V++L R G LE+A+ +I+ MP + S  ++ +LL+ C   G+ E
Sbjct: 855 LGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMALLAACNRRGDLE 914

Query: 737 LGEWASEKLLLLLPKNDAAHVLL 759
            G  A+ +   L P + AA + +
Sbjct: 915 RGIRAANRAQQLDPGSFAASMAM 937



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 177/626 (28%), Positives = 311/626 (49%), Gaps = 22/626 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   A  L      KS   G  VH HI+  G   + +LQN+LI MY+KCG     + VF+
Sbjct: 26  PARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFE 85

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +   N+ SWT +++A  + G     L  +  M+ +G  P+ F   +V+  C S GA   
Sbjct: 86  LLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNE 145

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G +IH   +   +E    VG +++N Y K G V  A+ VF  +   ++  WNA+I   A 
Sbjct: 146 GKAIHDCVVLAGMETQ-VVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQ 204

Query: 224 CGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G+  +A+ V   M  +G +  +  TF++ +  CS + D   G+  H  IIR+  +  + 
Sbjct: 205 NGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVI---SWNTLFGGFSENKNPGQTASLFHKFI 339
           + N+L++MY K   +D+A  VFE+M  +DV+   SW  +   F+ N +  +   LF+K  
Sbjct: 265 VGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMD 324

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G  PN VTF  +LR C  L   +   ++     H G   +  + ++ +  F + G + 
Sbjct: 325 LEGVLPNKVTFVTVLRACTTLAQCE---KIFARVKHLGLELDTTLGTAFVSTFAKLGDLA 381

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVET 457
            A  VF+N+ S +N+ +W  ++  Y         ++   ++++    E N  TF  V+++
Sbjct: 382 AARDVFENLGSSRNVVSWTVMIWAY----AQQGFIRAAFDLYKRMDCEPNAVTFMAVMDS 437

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMAS 516
           C R E+     QIH  ++ +GF S   +   L+  Y   G +D+++  F N  ER  + +
Sbjct: 438 CLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKER-SVVA 496

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M+SA    G    ++ ++  ++  G KPD+     +L++C ++   +R      +  
Sbjct: 497 WNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEARR------YAA 550

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
                 ++   +A + AYA+CG +K A+ AFD     N+ + +N +I   A HG   +A+
Sbjct: 551 TFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQAL 610

Query: 637 EIFDKMKLANLQPSQATFVSVMSACS 662
           E F KM+L  ++ +  T+++ + ACS
Sbjct: 611 ECFWKMELEGVRANSVTYLASLEACS 636



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P  Y   ++L  CA   +    K +H  ++  G     Y+ + +I  YAKCG ++ A  
Sbjct: 25  QPARY--ASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVE 82

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F+      +V  +  LI AYA  G + E +  F KM+L   +P    F +V++ACS  G
Sbjct: 83  VFEL-LPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAG 141

Query: 666 LVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            +++G     C++   M++Q            +V++  + G + +AK V E +P
Sbjct: 142 ALNEGKAIHDCVVLAGMETQV-------VGNAIVNLYGKCGRVHEAKAVFERLP 188


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/602 (31%), Positives = 311/602 (51%), Gaps = 14/602 (2%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKL--GDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           HC A K  I  + +V  ++L  Y+K   GD+  A ++F  +   D   WN MI GY   G
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               A   + SM   G   D YTF + L+G +     D+G+Q+H LI++   E S+   +
Sbjct: 82  NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY K   ++ A+ VF+ M  ++ +SWN L  GF +  +      L       G R 
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201

Query: 346 NHVTFSILLRQCGKLLDLD----LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              TF+ LL     LLD D    L +QL C  +  G      + ++ +  +  CG +E A
Sbjct: 202 EDGTFAPLL----TLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDA 257

Query: 402 HSVFDN-VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
             VFD  V  +++ TWN +L  Y  +  D D    F  +   G E +  T+  V+  C  
Sbjct: 258 KRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFA 317

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWG 518
           + ++      H  +IK G      IC++LI  Y+  N   ++ +    +  +  D  SW 
Sbjct: 318 AAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWN 377

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++++     G + +A+ +F  +  + E+ D+Y    +L SC+ +   Q  + IH   +K 
Sbjct: 378 SILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKT 437

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF++  +VAS++I  Y+KCG I+ A   F+ +   +  I +N+++ AYA HG    A+++
Sbjct: 438 GFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESS-ITWNSIMFAYAQHGQGDVALDL 496

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F  M+   ++    TFV+V++ACSH GLV++G  + KSM+S YG+ P  + Y C VD+  
Sbjct: 497 FSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFG 556

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R GYLE+AK +I+ MPFQP+  V ++LL  CR  GN EL    + +LL + P+    +V+
Sbjct: 557 RAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVI 616

Query: 759 LS 760
           LS
Sbjct: 617 LS 618



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/600 (22%), Positives = 274/600 (45%), Gaps = 8/600 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
            H    K G  + I++ NN++  YSKC  G      ++FDEM  ++ V+W  +++  +++
Sbjct: 21  THCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVES 80

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G      +    MK  GF  + +  GS++K        + G  +H   +KI  E++ + G
Sbjct: 81  GNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAG 140

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++L+ YAK   V  A  VF  +   +   WNA+I G+   G    A  ++  M  EG+ 
Sbjct: 141 SALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVR 200

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           ++  TF   L        + +  Q+H  II+  +E   ++ NA +  Y +   ++ A +V
Sbjct: 201 VEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRV 260

Query: 304 FE-RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           F+  +  +D+++WN++   +  +       +LF +    G  P+  T++ ++  C     
Sbjct: 261 FDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAH 320

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG--AVEMAHSVFDNVSYKNITTWNELL 420
            + G     L +  G  +   + ++LI M+ +    ++E A ++F ++  K+  +WN +L
Sbjct: 321 KNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSIL 380

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G+       D LK F ++  S  E++   +  V+ +C      Q+  QIH   +KTGF 
Sbjct: 381 TGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFD 440

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  ++ SSLI  Y   G ++++++      +    +W ++M A    G    A+ +F  +
Sbjct: 441 SNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIM 500

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            E   K D      +L +C+ +G  ++ + +        G    +   +  +D + + G 
Sbjct: 501 REREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGY 560

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++ A+   D      + +V  TL+ A    G +  A ++    +L  ++P +     ++S
Sbjct: 561 LEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQV--ASQLLEVEPEEHCTYVILS 618



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 191/400 (47%), Gaps = 3/400 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  IVK+G+   ++  + L+ MY+KC        VF  M  RN VSW  ++   +
Sbjct: 120 LGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFV 179

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+ D    +   M+  G    +     ++ +       +    +HC  +K  +E    
Sbjct: 180 QVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNA 239

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  + L  Y++ G +  A+RVF  ++ + D+  WN+M+  Y       +A N+   M   
Sbjct: 240 LCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGF 299

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK--SSGMD 298
           G   D YT+   +  C   A  + G+  H L+I+  +E S++I NALI MY+K  +  M+
Sbjct: 300 GFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSME 359

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +F  M  KD +SWN++  GFS+         LF     S    +   +S +LR C 
Sbjct: 360 AALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCS 419

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG Q+  L +  GF   + V SSLI+M+ +CG +E A   F++ + ++  TWN 
Sbjct: 420 DLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNS 479

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++  Y  +      L  F  + E  V+++  TF  V+  C
Sbjct: 480 IMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTAC 519



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 186/385 (48%), Gaps = 4/385 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-EM 105
            A  L+L +  K   L  Q+H  I+K G      L N  +  YS+CG      RVFD  +
Sbjct: 206 FAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAV 265

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R+LV+W  ++ A + + + +    ++++M+  GF P+ +    V+  C +     +G 
Sbjct: 266 GTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGK 325

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGD--VAAAERVFYSISSDDVGCWNAMIGGYAH 223
           S H   +K  +E++  +  +++  Y KL +  + AA  +F+S+ S D   WN+++ G++ 
Sbjct: 326 SFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQ 385

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  +AL +   M      +D Y +   L+ CS +A   +G+QIH L +++  + +  +
Sbjct: 386 MGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFV 445

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            ++LI MY K   ++ A+K FE    +  I+WN++   ++++        LF        
Sbjct: 446 ASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREV 505

Query: 344 RPNHVTFSILLRQCGKLLDLDLGL-QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           + +HVTF  +L  C  +  ++ G   L+ +    G        +  + +F R G +E A 
Sbjct: 506 KLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAK 565

Query: 403 SVFDNVSYKNITTWNELLSGYCFNC 427
           ++ D++ ++      + L G C  C
Sbjct: 566 ALIDSMPFQPNAMVLKTLLGACRAC 590


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 184/636 (28%), Positives = 316/636 (49%), Gaps = 8/636 (1%)

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
           K  GF         ++  C  + + E G  IH   LK +   +  +   +LN Y K G +
Sbjct: 55  KKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSL 114

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A++VF ++   +V  W ++I GY+  G G  AL     ML  G+  D++TF + ++ C
Sbjct: 115 KDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKAC 174

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           S + D  +GRQ+H  +++SE    I   NALI MY KS+ +  A  VF RMA +D+ISW 
Sbjct: 175 SSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWG 234

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           ++  GFS+     +    F + +  G   PN   F  +   C  LL  + G QL  +++ 
Sbjct: 235 SMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIK 294

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G   +     SL  M+ +CG +  A  VF  +   ++  WN +++G+ +     + +  
Sbjct: 295 FGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAF 354

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +   G+  +  T   ++  C          Q+HG I K G      +C++L+  Y  
Sbjct: 355 FSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAK 414

Query: 496 FGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             +L D  F F       D+ SW A+++A +H     E   +   +  +  +PD   L  
Sbjct: 415 CSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTN 474

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +L + A   + +    +H + +K G N ++ V + +ID YAKCG +K AR  FD   N  
Sbjct: 475 VLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINP- 533

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           DV+ +++LI+ YA  G   EA+++F  M+  +++P+  TFV V++ACSH GLV++G  L+
Sbjct: 534 DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLY 593

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR---- 730
            +M+ ++G+ P+ +   C+VD+L+R G L +A+  I  M F P   V+++LL+ C+    
Sbjct: 594 GTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACKSVHQ 653

Query: 731 -IHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQ 765
            +     L  W  +  ++ L K    +V    R+ +
Sbjct: 654 ALARRTNLKVWKKQHEVITLVKGKFVYVKQIDREEE 689



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 276/582 (47%), Gaps = 11/582 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           +S    L+S   G ++H H++K     D+ LQN+++ MY KCG      +VFD M ERN+
Sbjct: 70  ISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNV 129

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSWT +++   QNG+    L+ Y  M  +G MP++F  GS++K C S+G    G  +H  
Sbjct: 130 VSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAH 189

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            LK     +     ++++ Y K   +  A  VF  +++ D+  W +MI G++  GY  EA
Sbjct: 190 VLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEA 249

Query: 231 LNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           L     ML +G+ + +++ F +    CS +   + GRQ+HG+ I+  +   +    +L D
Sbjct: 250 LCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCD 309

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  A  VF ++   D+++WN +  GF+   +  +  + F +    G  P+ +T
Sbjct: 310 MYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEIT 369

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              LL  C    +L  G+Q+       G   +  V ++L+ M+ +C  +  A   F+ + 
Sbjct: 370 VRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMR 429

Query: 410 -YKNITTWNELLSGYCFNCCDAD----VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
              ++ +WN +L+  C +   A+    +LK  C    S    +  T   V+     + + 
Sbjct: 430 CNADLVSWNAILTA-CMHHDQAEEVFGLLKLMCI---SQHRPDYITLTNVLGASAETVSI 485

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           ++  Q+H   +KTG +    + + LI  Y   G L  + +  +     D+ SW +++   
Sbjct: 486 EIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGY 545

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTE 583
              G+  EA+ +F ++     KP+      +L +C+ +G  +    ++  + K  G    
Sbjct: 546 AQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPT 605

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
               S ++D  A+ G +  A     Q     D++V+ TL+ A
Sbjct: 606 REHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAA 647



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 178/387 (45%), Gaps = 4/387 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG  +K G   D+F   +L  MY+KCG       VF ++   +LV+W  I++    
Sbjct: 285 GRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAY 344

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+    +  +  M+  G +P+E  V S++  C S      G  +H +  K+ ++ +  V
Sbjct: 345 GGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPV 404

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             ++L  YAK  ++  A   F  +  + D+  WNA++    H     E   ++  M    
Sbjct: 405 CNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQ 464

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T  N L   +     +IG Q+H   +++ + C IS+ N LID+Y K   +  A 
Sbjct: 465 HRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTAR 524

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F+ + + DV+SW++L  G+++     +   LF        +PNHVTF  +L  C  + 
Sbjct: 525 KIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVG 584

Query: 362 DLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
            ++ G QL   +    G +      S ++ +  R G +  A +    +++  +I  W  L
Sbjct: 585 LVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTL 644

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEV 446
           L+  C +   A   +T   +W+   EV
Sbjct: 645 LAA-CKSVHQALARRTNLKVWKKQHEV 670


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 164/586 (27%), Positives = 311/586 (53%), Gaps = 1/586 (0%)

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           ++  N  +G  ++  Y +     +A +VF  + + +   W ++I  +   G   +AL + 
Sbjct: 81  QLAGNTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLF 140

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           SSML  G   D++   +A++ C+ + D   GRQ+H   ++SE    + + NAL+ MY K+
Sbjct: 141 SSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKN 200

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSIL 353
             +D  F +FER+ DKD+ISW ++  GF++     +   +F K I+ GS  PN   F   
Sbjct: 201 GLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSA 260

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            R CG +   + G Q+  L++      +  V  SL  M+ R   ++ A   F  +   ++
Sbjct: 261 FRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDL 320

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +++ Y      ++ L  F  + +SG+  +G T   ++  C   +       IH  
Sbjct: 321 VSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSY 380

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K G      +C+SL+  Y     L ++ +  +  +  D+ +W ++++A     H  E 
Sbjct: 381 LVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEV 440

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  L ++    D   L  +L++ A +G ++  K +H +  K G   +  +++ +ID 
Sbjct: 441 LKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDT 500

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  A   F+   N+ DV  +++LI+ YA  G   EA+++F +M+   ++P+  T
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVT 560

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+ V++ACS  G V++GC  +  M+ +YG+ P+ +   C+VD+L+R G L +A + I+ M
Sbjct: 561 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 620

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           PF+P   ++++LL+  ++H + E+G+ A+E +L + P + AA+VLL
Sbjct: 621 PFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLL 666



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/653 (26%), Positives = 301/653 (46%), Gaps = 18/653 (2%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLG-------FTNDIFLQNNLIAMYSKCGYFGWGLR 100
           A  +S    L+S   G +VH H+V             +  L N+LI MY +C       +
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQ 107

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFDEM  RN VSW  +++A +QNG     L ++  M  +G   ++FA+GS ++ C  +G 
Sbjct: 108 VFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 167

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  +H  ALK     +  V  +++  Y+K G V     +F  I   D+  W ++I G
Sbjct: 168 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227

Query: 221 YAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +A  G+  EAL V   M+ EG    +++ F +A + C  V  ++ G QIHGL I+  ++ 
Sbjct: 228 FAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 287

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  +L DMY +   +D A   F R+   D++SWN++   +S      +   LF +  
Sbjct: 288 DLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 347

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG RP+ +T   LL  C     L  G  +    +  G   + +V +SL+ M+ RC  + 
Sbjct: 348 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLS 407

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF  +  +++ TWN +L+    +    +VLK F  + +S   ++  +   V+    
Sbjct: 408 SAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASA 467

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWG 518
                +MV Q+H    K G      + ++LI +Y   G LD++   F       D+ SW 
Sbjct: 468 ELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWS 527

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IK 577
           +++      G+  EA+ +F  +   G +P+      +L +C+ +G        +  +  +
Sbjct: 528 SLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPE 587

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G        S ++D  A+ G +  A    DQ     D+I++ TL+ A   H      ME
Sbjct: 588 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH----NDME 643

Query: 638 IFDKMK--LANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +  +    + N+ PS  A +V + +  +  G  ++   L K+M +  G++ SP
Sbjct: 644 MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTS-GVKKSP 695



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   LS S  L    +  QVH +  K G  +D  L N LI  Y+KCG     +R+F
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514

Query: 103 DEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + M   R++ SW+ ++    Q G     L ++  M++ G  PN      V+  C  +G
Sbjct: 515 EIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVG 572


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 195/702 (27%), Positives = 345/702 (49%), Gaps = 7/702 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I  L   ND+ +   L+  Y KCG      +VF EM ER+LVSW  ++S  + 
Sbjct: 79  GVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPF 181
              +   + ++V+MK  G  PN   V +++  C  M     G  IH + L+  + + + +
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAY 198

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++ FY +  D   + RVF  +   ++  WNA+I G+ + G   +AL + SSML EG
Sbjct: 199 VGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  T +  +Q C+      +G Q+H L I+  +   + I+NAL++MY  +  ++ ++
Sbjct: 258 IKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSW 317

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +   D   WN++   +       +  +LF K  L   + +  T +I+L  C  L 
Sbjct: 318 ALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLN 377

Query: 362 DLDL-GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           D  + G  L   A+  G   +  + ++L+ M+ +   +  A  VF+ +   ++ +WN ++
Sbjct: 378 DGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMI 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S +  +   A   + F  + ES ++ N  T   ++  C    +      IHG  IK G  
Sbjct: 438 SAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLE 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SL + Y+N G    +        + D+ SW +++S+ +   +  +A+ +F+ +
Sbjct: 498 INTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM 557

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--LGFNTEVYVASAVIDAYAKCG 598
           +   E P+   +  IL SC  +      + +H +  +  +    +  +A+A I  YA+CG
Sbjct: 558 ISELE-PNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCG 616

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A   F  +  +  ++ +N +I  Y  HG   +A   F +M     +P+  +F SV+
Sbjct: 617 KLQYAEKIF-CTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVL 675

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GL   G  LF SM   +G+ P    YGC+VD+L R G+  +A   I  MP +P 
Sbjct: 676 SACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPD 735

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +++R+LLS C+I  N +L E    KL+ L P N    +LLS
Sbjct: 736 ASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLS 777



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/620 (23%), Positives = 296/620 (47%), Gaps = 7/620 (1%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L  Y  M++ G  P+   +  V+K C  + A   G  IH     + +  +  VG ++++F
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDF 104

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G VA A +VF  +   D+  WNA+I GY  C    EA+ +   M   G+T +  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +  L  C  + +  +G++IHG  +R+ + +    +  AL+  Y++   +  + +VF  M 
Sbjct: 165 VALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSLML 223

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++++SWN +  GF    +  +   L+   ++ G + + VT  ++++ C +   L LG+Q
Sbjct: 224 VRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQ 283

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           L  LA+    +++  + ++L+ M+   G++E + ++F+ V   +   WN ++S Y     
Sbjct: 284 LHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGF 343

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICS 487
            A+ +  F  +    ++ +  T   ++  C    +  + G+ +H   +K+G     Y+ +
Sbjct: 344 HAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGN 403

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  YV   Q+  +         LD+ SW  M+SA        +A  +F  + E+  K 
Sbjct: 404 ALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKF 463

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           + Y + ++L  C         +SIH F IK G      + +++ + Y  CGD + A   F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     D++ +N+LI +Y  +    +A+ +F+ M ++ L+P+  T ++++++C+    +
Sbjct: 524 TRC-PQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTIINILTSCTQLAHL 581

Query: 668 DKG-CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
             G CL   +   +  ++         + M +R G L+ A+ +   +  + S   + +++
Sbjct: 582 PLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMI 640

Query: 727 SGCRIHGNKELGEWASEKLL 746
           +G  +HG       A  ++L
Sbjct: 641 TGYGMHGRGRDATLAFAQML 660



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 240/528 (45%), Gaps = 15/528 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K    ND+F+ N L+ MYS  G       +F+ +   +   W  ++S+ I
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKNP 180
             G     + +++ M+      +   +  ++ +C  +   S +G  +H  A+K  IE + 
Sbjct: 340 GFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDA 399

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           ++G ++L+ Y K   + AA+ VF  +   DV  WN MI  +A   +  +A  +   M   
Sbjct: 400 YLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCES 459

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I  + YT ++ L  C   +D   GR IHG  I++ +E + S+  +L +MYI       A
Sbjct: 460 EIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAA 519

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F R   +D++SWN+L   + +N N G+   LF+  I S   PN VT   +L  C +L
Sbjct: 520 TNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQL 578

Query: 361 LDLDLGLQLQCLALHCGFLD-----EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             L LG   QCL  +    +     + ++ ++ I M+ RCG ++ A  +F  +  ++I +
Sbjct: 579 AHLPLG---QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS 635

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI-HGAI 474
           WN +++GY  +    D    F  + + G + N  +F  V+  C  S       Q+ H  +
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMV 695

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEA 533
              G +        ++      G    +  F N      D + W A++S+   + +N   
Sbjct: 696 RDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLL 755

Query: 534 VTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
            TIF  LVE     P  +IL  + N  AA G +     I  ++ + G 
Sbjct: 756 ETIFGKLVELEPSNPGNFIL--LSNIYAAAGLWSEVVQIRKWLRERGL 801



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 218/451 (48%), Gaps = 6/451 (1%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN++I  +         L+  + M   GIT D  T    L+ C  +     G +IH  I 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
             ++   + +  AL+D Y K   +  A KVF  M ++D++SWN L  G+       +   
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMF 392
           LF +   +G  PN  T   LL  CG++L+L LG ++    L  G  D +  V ++L+  +
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTF 451
            R  AV ++H VF  +  +NI +WN +++G+  N  D A  LK + ++   G++ +  T 
Sbjct: 208 MRFDAV-LSHRVFSLMLVRNIVSWNAIITGF-LNVGDCAKALKLYSSMLIEGIKFDAVTM 265

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C      ++  Q+H   IK    +  +I ++L+  Y + G L++S+   N    
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKS 570
            D A W +M+S+ +  G + EA+ +F  +     K D   +  +L+ C  +       + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRG 385

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H   +K G   + Y+ +A++  Y K   I  A+  F++     DVI +NT+I A+A   
Sbjct: 386 LHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEK-MRGLDVISWNTMISAFAQSM 444

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             ++A E+F  M  + ++ +  T VS+++ C
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFC 475



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 164/334 (49%), Gaps = 6/334 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKS-RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +++D   +A  LSL  +L    + G  +H H +K G   D +L N L++MY K       
Sbjct: 359 IKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAA 418

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF++M   +++SW  ++SA  Q+       ++++ M  +    N + + S++  C   
Sbjct: 419 QYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDG 478

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
               FG SIH FA+K  +E N  +  S+   Y   GD  AA  +F      D+  WN++I
Sbjct: 479 SDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLI 538

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV- 277
             Y       +AL + + M+ E +  +  T IN L  C+ +A   +G+ +H    R EV 
Sbjct: 539 SSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVS 597

Query: 278 -ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL-F 335
            E   S+ NA I MY +   + YA K+F  +  + ++SWN +  G+  +   G+ A+L F
Sbjct: 598 LEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGR-GRDATLAF 656

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            + +  G +PN+V+F+ +L  C        GLQL
Sbjct: 657 AQMLDDGFKPNNVSFASVLSACSHSGLTVTGLQL 690



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 200/403 (49%), Gaps = 9/403 (2%)

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN++    ++ KN     S + +    G  P+  T  ++L+ CG+L  +  G+++     
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
               +++  V ++L+  +C+CG V  A  VF  +  +++ +WN L+SGY    C  + + 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSLIKSY 493
            F  + ++G+  N  T   ++  C      ++  +IHG  ++ G F    Y+ ++L+  Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
           + F  + +   FS    R ++ SW A+++  ++ G   +A+ ++ S++  G K D   + 
Sbjct: 208 MRFDAVLSHRVFSLMLVR-NIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
            ++ +CA  G  +    +H   IK     ++++ +A+++ Y+  G ++ +   F+ +  +
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFN-AVPT 325

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           +D  ++N++I +Y   G  +EA+ +F KM+L  ++    T   ++S C+    ++ G + 
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCND---LNDGSIW 382

Query: 674 FKSMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            + + +   + G++        L+ M  ++  +  A++V E M
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKM 425



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 6/290 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G  +HG  +K G   +  L  +L  MY  CG       +F    +R+LVSW  ++S+ 
Sbjct: 482 VFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSY 541

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEK 178
           I+N      L ++  M +    PN   + +++  C  +     G  +H +  +  + +E 
Sbjct: 542 IKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEM 600

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  + +  YA+ G +  AE++F ++ +  +  WNAMI GY   G G +A    + ML
Sbjct: 601 DASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQML 660

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGM 297
            +G   +  +F + L  CS       G Q+ H ++    +   ++    ++D+  +    
Sbjct: 661 DDGFKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHF 720

Query: 298 DYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRP 345
             A      M  + D   W  L        N     ++F K + L  S P
Sbjct: 721 SEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNP 770


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 196/647 (30%), Positives = 329/647 (50%), Gaps = 28/647 (4%)

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
           A +N  F + L+ Y+               S++  C S  +   G  IH   L    + +
Sbjct: 57  AQKNSSFKIRLRTYI---------------SLICACSSSRSLAQGRKIHDHILNSNCKYD 101

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +   +L+ Y K G +  A  VF  +   ++  + ++I GY+  G G EA+ +   ML 
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           E +  D++ F + ++ C+  +D  +G+Q+H  +I+ E    +   NALI MY++ + M  
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCG 358
           A +VF  +  KD+ISW+++  GFS+     +  S   + +  G   PN   F   L+ C 
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            LL  D G Q+  L +            SL  M+ RCG +  A  VFD +   +  +WN 
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF--FYVVETCCRSENQQMVGQIHGAIIK 476
           +++G   N    + +  F  +  SG   +  +       +T   + +Q M  QIH  IIK
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM--QIHSYIIK 399

Query: 477 TGFSSCGYICSSLIKSYVNFGQLD---NSFE-FSNGAERLDMASWGAMMSALVHQGHNHE 532
            GF +   +C+SL+  Y     L    N FE F N A   D  SW  +++A +      E
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA---DSVSWNTILTACLQHEQPVE 456

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            + +F  ++ +  +PD   +G +L  C  I + +    +H + +K G   E ++ + +ID
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG +  AR  FD S ++ DV+ ++TLI+ YA  G   EA+ +F +MK A ++P+  
Sbjct: 517 MYAKCGSLGQARRIFD-SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TFV V++ACSH GLV++G  L+ +M +++G+ P+ +   C+VD+L+R G L +A+  I+ 
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           M  +P   V+++LLS C+  GN  L + A+E +L + P N  AHVLL
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLL 682



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 166/624 (26%), Positives = 302/624 (48%), Gaps = 6/624 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S   G ++H HI+      D  L N++++MY KCG       VFD M ERNLVS+T ++
Sbjct: 81  RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +   QNG+    +++Y+ M     +P++FA GS++K C S      G  +H   +K+   
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +     +++  Y +   ++ A RVFY I   D+  W+++I G++  G+ FEAL+ +  M
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260

Query: 238 LFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           L  G+   ++Y F ++L+ CS +   D G QIHGL I+SE+  +     +L DMY +   
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A +VF+++   D  SWN +  G + N    +  S+F +   SG  P+ ++   LL  
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITT 415
             K + L  G+Q+    +  GFL +  V +SL+ M+  C  +    ++F++  +  +  +
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +L+    +    ++L+ F  +  S  E +  T   ++  C    + ++  Q+H   +
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           KTG +   +I + LI  Y   G L  +    +  +  D+ SW  ++      G   EA+ 
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVIDAY 594
           +F  +  AG +P+      +L +C+ +G  +    ++  +  + G +      S V+D  
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQAT 653
           A+ G +  A    D+     DV+V+ TL+ A    G V  A +  +  +K+     +   
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680

Query: 654 FVSVMSACSHKGLVDKGCLLFKSM 677
            +  M A S  G  +   LL  SM
Sbjct: 681 LLCSMHASS--GNWENAALLRSSM 702



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 4/167 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           + S  LG+QVH + +K G   + F++N LI MY+KCG  G   R+FD M  R++VSW+ +
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +    Q+G  +  L ++ +MK+ G  PN      V+  C  +G  E G  ++   ++   
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEH 604

Query: 177 EKNPFVG-CS-VLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
             +P    CS V++  A+ G +  AER    +    DV  W  ++  
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651


>gi|302771700|ref|XP_002969268.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
 gi|300162744|gb|EFJ29356.1| hypothetical protein SELMODRAFT_92008 [Selaginella moellendorffii]
          Length = 849

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 197/712 (27%), Positives = 347/712 (48%), Gaps = 15/712 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           +S+    +S   G  VH  I+     +D+ + N L+ M +KC       R F  M  R++
Sbjct: 133 ISILNACESLAQGELVHRLIIDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDV 192

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SWT +V+A  +NG        Y+ M   G +PN     +V+  C S   +E  Y     
Sbjct: 193 ISWTGMVTAYARNGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDAELVYG---N 249

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            ++   E +  V  + +N ++K G +  A  VF+ +   DV  WNAM+   A  G+  EA
Sbjct: 250 VVEAEWESDTMVANASINMFSKCGCLDRARDVFHRMKRWDVKSWNAMVAALAQHGFSSEA 309

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M  E + +DK T + AL  C+     + G+ IH  + R  +E  +    AL+ M
Sbjct: 310 LELFRRMPSE-VAVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTM 368

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVT 349
           Y +   +  A +VF+ +  K+V+SWN +   +  +++    A  +F   +L G RP   T
Sbjct: 369 YSRCGDLGEARRVFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT 428

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
               L     +    +G QL    +  G   +  + S+L+ M+ R G++  A  VF+ + 
Sbjct: 429 ---ALNVVSAVECQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKII 485

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +++  WN ++     +    + L+ F  +   G   N  TF   +     S ++   G+
Sbjct: 486 ERDVFAWNAIVGVCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAV--SPDRVCYGR 543

Query: 470 -IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +HG I ++G  +   + ++LI  Y     L+++    +  E   + SW ++++A V  G
Sbjct: 544 RLHGLIAESGLEADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLG 603

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              EA+ +F  +     +PD     T+L +C  + A++  K +H    +LG  + V+VA+
Sbjct: 604 SCQEAIDLFQRM---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVAT 660

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+I  ++K G++  AR  F ++  +  +  +N ++  YA  G     ++ F  M+   + 
Sbjct: 661 ALIHMHSKFGNLGEARRIF-EAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVA 719

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P   TF++V+SACSH GLV+KG   F SM + YG+    + YGCL+D+L+R G LE+A  
Sbjct: 720 PDHITFLAVVSACSHAGLVEKGARTFASMGTDYGVGHGLEDYGCLIDLLARAGQLEEAYD 779

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++ MP  PS   +++LL+ C+I G+   G  A+  ++   P   AA V LS
Sbjct: 780 FLQGMPCGPSDVTWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELS 831



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 177/670 (26%), Positives = 311/670 (46%), Gaps = 24/670 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            T V+  I   G   D F   +++ M+ KC       RVF++M +R++V WT +V+A + 
Sbjct: 47  ATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVD 106

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + + D     +  M+  G +P+     S++  C S+   E    +H   +   +E +  +
Sbjct: 107 DEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQGEL---VHRLIIDKNLESDVVI 163

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++   AK  D+  A R F  +   DV  W  M+  YA  G+  EA      ML EG+
Sbjct: 164 GNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGV 223

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  TF+  L  CS   D ++   ++G ++ +E E    + NA I+M+ K   +D A  
Sbjct: 224 VPNNITFLAVLAACSSARDAEL---VYGNVVEAEWESDTMVANASINMFSKCGCLDRARD 280

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF RM   DV SWN +    +++    +   LF + + S    +  T  I L  C     
Sbjct: 281 VFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRR-MPSEVAVDKTTLVIALSTCAAPES 339

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G  +       G   +    ++L+ M+ RCG +  A  VFD +  KN+ +WN +++ 
Sbjct: 340 LEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA 399

Query: 423 YCFN-CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           Y  +    +  L+ F  +   GV     T   VV      E Q +  Q+HG I+ TG  S
Sbjct: 400 YGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAV---ECQSVGKQLHGWIVDTGLYS 456

Query: 482 CGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             +I S+L+  Y   G L D    F    ER D+ +W A++   V  G   EA+  F  +
Sbjct: 457 DSFIGSALVNMYERTGSLGDARRVFEKIIER-DVFAWNAIVGVCVGHGQPREALEWFSRM 515

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQ--RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +  G   +     T L + +A+   +    + +H  + + G   +  VA+A+I  YA+C 
Sbjct: 516 LLEGASGNR---ATFLLALSAVSPDRVCYGRRLHGLIAESGLEADNNVANALISMYARCK 572

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ AR  FD+      ++ + ++I A    G   EA+++F +M+   L+P + TF +V+
Sbjct: 573 SLEDARNTFDR-LEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVL 628

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            AC+      +G L+  S   + G++ +      L+ M S+ G L +A+ + E +   P+
Sbjct: 629 EACTIVSAHREGKLV-HSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVE-APT 686

Query: 719 PTVYRSLLSG 728
              + ++L G
Sbjct: 687 LACWNAMLGG 696


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 187/610 (30%), Positives = 314/610 (51%), Gaps = 3/610 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++++C    A+  G  +H +  K        +G ++L+ + + GD+  A  VF  ++  
Sbjct: 99  ALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER 158

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  WN ++GGYA  GY  EALN+   ML+ GI  D YTF   L+ C  + D   GR++H
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             +IR   E  + +VNALI MY+K   +  A  VF+RM  +D ISWN +  G+ EN    
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF         P+ +T + ++  C  L D  LG ++    +  GF+ E +V +SLI
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M    G  + A  VF  + +K++ +W  ++SGY  N      ++T+  +   GV  +  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C           +H    +TG +S   + +SLI  Y     +D + E  +  
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              ++ SW +++  L     + EA+  F  ++    KP+   L ++L++CA IGA    K
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGK 517

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH   ++ G   + ++ +A++D Y +CG ++ A   F+      DV  +N L+  YA  
Sbjct: 518 EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC--EKDVASWNILLTGYAQQ 575

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G    A+E+F KM  +++ P + TF S++ ACS  G+V  G   F+SM+ ++ + P+   
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y  +VD+L R G LEDA   I+ MP  P P ++ +LL+ CRI+ N ELGE A++ +  + 
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695

Query: 750 PKNDAAHVLL 759
            K+   ++LL
Sbjct: 696 TKSVGYYILL 705



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 243/513 (47%), Gaps = 2/513 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L E  ++   G++VH ++ K      + L N L++M+ + G       VF +MAER+L
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDL 160

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW ++V    + G FD  L +Y  M   G  P+ +    V++ C  +     G  +H  
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            ++   E +  V  +++  Y K GD+ +A  VF  +   D   WNAMI GY       E 
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M    +  D  T  + +  C  + D  +GR++HG +I++     +S+ N+LI M
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQM 340

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           +      D A  VF +M  KD++SW  +  G+ +N  P +    +      G  P+ +T 
Sbjct: 341 HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L  LD G+ L   A   G      V +SLI M+ +C  ++ A  VF  +  
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           KN+ +W  ++ G   N    + L  F  +  S ++ N  T   V+  C R        +I
Sbjct: 461 KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEI 519

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H   ++TG    G++ ++L+  YV  G+++ ++   N  E+ D+ASW  +++    QG  
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKG 578

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             AV +FH ++E+   PDE    ++L +C+  G
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSG 611



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 251/478 (52%), Gaps = 3/478 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL  + SM    +++++ T+I  L+ C        G ++H  + ++     + + NAL+
Sbjct: 77  KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            M+++   +  A+ VF +MA++D+ SWN L GG+++     +  +L+H+ +  G RP+  
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +LR CG L DL  G ++    +  GF  + +V ++LI M+ +CG +  A  VFD +
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  N    + L+ F  + E  V+ +  T   V+  C    ++++  
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++HG +IKTGF +   + +SLI+ + + G  D +    +  E  D+ SW AM+S     G
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +AV  +  +   G  PDE  + ++L++CA +G   +   +H F  + G  + V VA+
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++ID Y+KC  I  A   F +  N N VI + ++I+    +    EA+  F +M L+ L+
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKN-VISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           P+  T VSV+SAC+  G +  G  +  +   + G+         L+DM  R G +E A
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEI-HAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 166/321 (51%), Gaps = 2/321 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F+  D + +   +S  E L    LG +VHG+++K GF  ++ + N+LI M+S  G +   
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEA 350

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF +M  ++LVSWT ++S   +NG  +  ++ Y  M+  G +P+E  + SV+  C  +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G  + G  +H FA +  +     V  S+++ Y+K   +  A  VF+ I + +V  W ++I
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G       FEAL     M+   +  +  T ++ L  C+ +     G++IH   +R+ + 
Sbjct: 471 LGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               + NAL+DMY++   M+ A+  F    +KDV SWN L  G+++    G    LFHK 
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKM 588

Query: 339 ILSGSRPNHVTFSILLRQCGK 359
           I S   P+ +TF+ LL  C +
Sbjct: 589 IESDVNPDEITFTSLLCACSR 609


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 176/573 (30%), Positives = 304/573 (53%), Gaps = 2/573 (0%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYT 248
           YA  G V  A ++F  +S   +  WNA+I  Y   G+ F+AL V  SM+  G    DKYT
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           F   ++ CS+++  ++G  IHG  + S    ++ + N+L+ MY+    +  A +VF  M 
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            + V+SWNT+  G+ +N  P +  ++F+  + +   P+  T    L  CG L +L+LG++
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIK 306

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  L       ++  V ++L+ M+ RCG ++ A  VF     K++ TW  +++GY  N  
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGN 366

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L     +   GV  N  T   ++  C      +    +H  +++    S   + ++
Sbjct: 367 AKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTA 426

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           LI  Y     +  SF+            W A++S L+H     EAV +F S++    + +
Sbjct: 427 LIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 486

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                +++ + A +   ++  ++H ++++ GF +++ V + +ID Y+KCG +  A   FD
Sbjct: 487 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 546

Query: 609 QSFN-SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           +  N   D+IV++ LI  Y  HG    A+ +F++M  + +QP++ TF SV+ ACSH+GLV
Sbjct: 547 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 606

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D G  LFK M   Y   P P+ Y C+VD+L R G L++A  +I+ MPFQ + +++ +LL 
Sbjct: 607 DDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLG 666

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C IH N ELGE A+E+L  L P++   ++LL+
Sbjct: 667 ACLIHQNVELGEVAAERLFELEPESTGNYILLA 699



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 262/555 (47%), Gaps = 16/555 (2%)

Query: 66  VHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +HGH +  G     N I L ++L   Y+ CG      ++FD++++ +L  W  I+   + 
Sbjct: 101 LHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVD 160

Query: 123 NG-EFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            G  FD  L+++  M  +G   P+++    V+K C  M     G  IH  AL      N 
Sbjct: 161 KGFHFD-ALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNM 219

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+L  Y   G V  A +VF  +    V  WN MI G+   G   EAL V +SM+  
Sbjct: 220 FVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDA 279

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  D  T ++AL  C  + + ++G ++H L+ ++ ++  I + NAL+DMY +  GMD A
Sbjct: 280 RVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEA 339

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF    +KDVI+W ++  G+  N N     +L     L G  PN VT + LL  C  L
Sbjct: 340 SLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASL 399

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G  L    +      +  V ++LI M+ +C AV  +  VF   S K    WN LL
Sbjct: 400 CCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALL 459

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG   N    + +  F ++    VE N  TF  V+       + + V  +H  ++++GF 
Sbjct: 460 SGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFI 519

Query: 481 SCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           S   + + LI  Y   G LD +   F+     E+ D+  W  +++     GH   AV +F
Sbjct: 520 SKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEK-DIIVWSVLIAGYGMHGHGETAVLLF 578

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           + +V +G +P+E    ++L++C+  G      ++  ++I      E Y +S + + Y   
Sbjct: 579 NQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMI------ENYPSSPLPNHYTCV 632

Query: 598 GDIKGARMAFDQSFN 612
            D+ G     D++++
Sbjct: 633 VDLLGRAGRLDEAYD 647



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 243/516 (47%), Gaps = 19/516 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +HG  +  GF++++F+QN+L+AMY  CG  G   +VF+ M +R++VSW  ++S   
Sbjct: 202 VGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWF 261

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  L ++  M      P+   + S +  C  +   E G  +H    K  +++   
Sbjct: 262 QNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIE 321

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ Y++ G +  A  VF      DV  W +MI GY   G    AL +  +M  +G
Sbjct: 322 VRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDG 381

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T  + L  C+ +     G+ +H  ++R +++  + +V ALIDMY K + + Y+F
Sbjct: 382 VVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSF 441

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF + + K  + WN L  G   N+   +   LF   ++     NH TF+ ++     L 
Sbjct: 442 QVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILA 501

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNEL 419
           DL   + L    +  GF+ +  V + LI M+ +CG+++ AH +FD +    K+I  W+ L
Sbjct: 502 DLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVL 561

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  +      +  F  +  SG++ N  TF  V+  C         G +   +    +
Sbjct: 562 IAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR------GLVDDGLTLFKY 615

Query: 480 SSCGYICSSLIKSYV-------NFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHN 530
               Y  S L   Y          G+LD +++       + + + WGA++ A L+HQ   
Sbjct: 616 MIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVE 675

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
              V          E    YIL  + N  AA+G ++
Sbjct: 676 LGEVAAERLFELEPESTGNYIL--LANIYAAVGRWK 709



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 200/399 (50%), Gaps = 17/399 (4%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+ +  D   +  +L    +LK   LG +VH  + K      I ++N L+ MYS+CG   
Sbjct: 278 DARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMD 337

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               VF E  E+++++WT +++  I NG     L +   M+ +G +PN   + S++  C 
Sbjct: 338 EASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA 397

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S+   + G S+H + ++ +++ +  V  ++++ YAK   V+ + +VF   S      WNA
Sbjct: 398 SLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNA 457

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++ G  H     EA+ +  SML E +  +  TF + +   +++AD      +H  ++RS 
Sbjct: 458 LLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSG 517

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASL 334
               I+++  LIDMY K   +DYA K+F+ +   +KD+I W+ L  G+  + +      L
Sbjct: 518 FISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLL 577

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL------ 388
           F++ + SG +PN +TF+ +L  C     +D GL L        ++ E   +S L      
Sbjct: 578 FNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTL------FKYMIENYPSSPLPNHYTC 631

Query: 389 -IYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYCF 425
            + +  R G ++ A+ +  ++ + +N + W  LL G C 
Sbjct: 632 VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALL-GACL 669


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 187/610 (30%), Positives = 314/610 (51%), Gaps = 3/610 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++++C    A+  G  +H +  K        +G ++L+ + + GD+  A  VF  ++  
Sbjct: 99  ALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAER 158

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  WN ++GGYA  GY  EALN+   ML+ GI  D YTF   L+ C  + D   GR++H
Sbjct: 159 DLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             +IR   E  + +VNALI MY+K   +  A  VF+RM  +D ISWN +  G+ EN    
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCL 278

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF         P+ +T + ++  C  L D  LG ++    +  GF+ E +V +SLI
Sbjct: 279 EGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLI 338

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M    G  + A  VF  + +K++ +W  ++SGY  N      ++T+  +   GV  +  
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C           +H    +TG +S   + +SLI  Y     +D + E  +  
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRI 458

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              ++ SW +++  L     + EA+  F  ++    KP+   L ++L++CA IGA    K
Sbjct: 459 PNKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGK 517

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH   ++ G   + ++ +A++D Y +CG ++ A   F+      DV  +N L+  YA  
Sbjct: 518 EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC--EKDVASWNILLTGYAQQ 575

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G    A+E+F KM  +++ P + TF S++ ACS  G+V  G   F+SM+ ++ + P+   
Sbjct: 576 GKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKH 635

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y  +VD+L R G LEDA   I+ MP  P P ++ +LL+ CRI+ N ELGE A++ +  + 
Sbjct: 636 YASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMD 695

Query: 750 PKNDAAHVLL 759
            K+   ++LL
Sbjct: 696 TKSVGYYILL 705



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 243/513 (47%), Gaps = 2/513 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L E  ++   G++VH ++ K      + L N L++M+ + G       VF +MAER+L
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDL 160

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW ++V    + G FD  L +Y  M   G  P+ +    V++ C  +     G  +H  
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            ++   E +  V  +++  Y K GD+ +A  VF  +   D   WNAMI GY       E 
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M    +  D  T  + +  C  + D  +GR++HG +I++     +S+ N+LI M
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQM 340

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           +      D A  VF +M  KD++SW  +  G+ +N  P +    +      G  P+ +T 
Sbjct: 341 HSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITI 400

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L  LD G+ L   A   G      V +SLI M+ +C  ++ A  VF  +  
Sbjct: 401 ASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN 460

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           KN+ +W  ++ G   N    + L  F  +  S ++ N  T   V+  C R        +I
Sbjct: 461 KNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEI 519

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H   ++TG    G++ ++L+  YV  G+++ ++   N  E+ D+ASW  +++    QG  
Sbjct: 520 HAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKG 578

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             AV +FH ++E+   PDE    ++L +C+  G
Sbjct: 579 GLAVELFHKMIESDVNPDEITFTSLLCACSRSG 611



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/478 (29%), Positives = 251/478 (52%), Gaps = 3/478 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL  + SM    +++++ T+I  L+ C        G ++H  + ++     + + NAL+
Sbjct: 77  KALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALL 136

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            M+++   +  A+ VF +MA++D+ SWN L GG+++     +  +L+H+ +  G RP+  
Sbjct: 137 SMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVY 196

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +LR CG L DL  G ++    +  GF  + +V ++LI M+ +CG +  A  VFD +
Sbjct: 197 TFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRM 256

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  N    + L+ F  + E  V+ +  T   V+  C    ++++  
Sbjct: 257 PRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGR 316

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++HG +IKTGF +   + +SLI+ + + G  D +    +  E  D+ SW AM+S     G
Sbjct: 317 EVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNG 376

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +AV  +  +   G  PDE  + ++L++CA +G   +   +H F  + G  + V VA+
Sbjct: 377 LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVAN 436

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++ID Y+KC  I  A   F +  N N VI + ++I+    +    EA+  F +M L+ L+
Sbjct: 437 SLIDMYSKCRCIDKALEVFHRIPNKN-VISWTSIILGLRLNYRSFEALFFFQQMILS-LK 494

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           P+  T VSV+SAC+  G +  G  +  +   + G+         L+DM  R G +E A
Sbjct: 495 PNSVTLVSVLSACARIGALSCGKEI-HAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 166/321 (51%), Gaps = 2/321 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F+  D + +   +S  E L    LG +VHG+++K GF  ++ + N+LI M+S  G +   
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEA 350

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF +M  ++LVSWT ++S   +NG  +  ++ Y  M+  G +P+E  + SV+  C  +
Sbjct: 351 EMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGL 410

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G  + G  +H FA +  +     V  S+++ Y+K   +  A  VF+ I + +V  W ++I
Sbjct: 411 GLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSII 470

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G       FEAL     M+   +  +  T ++ L  C+ +     G++IH   +R+ + 
Sbjct: 471 LGLRLNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLG 529

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               + NAL+DMY++   M+ A+  F    +KDV SWN L  G+++    G    LFHK 
Sbjct: 530 FDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKM 588

Query: 339 ILSGSRPNHVTFSILLRQCGK 359
           I S   P+ +TF+ LL  C +
Sbjct: 589 IESDVNPDEITFTSLLCACSR 609


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 189/758 (24%), Positives = 357/758 (47%), Gaps = 46/758 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++  GF    F+ N L+ MY++CG       VFD M  R+ VSW  +++A + 
Sbjct: 38  GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVH 97

Query: 123 NGEFDMGLKMY-------------------------------VDMKTNGFMPNEFAVGSV 151
            G+ D    ++                               ++M   G   +   +  +
Sbjct: 98  AGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVL 157

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C  +     G  IH  A+K  +E +   G ++++ Y K   +  A R F+ +   + 
Sbjct: 158 LKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNS 217

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W A I G          + +   M   G+ + +  + +A + C+ +      RQ+H  
Sbjct: 218 VSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAH 277

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            I++       +  A++D+Y K+  +  A + F  +   +V + N +  G        + 
Sbjct: 278 AIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEA 337

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LF     SG   + ++ S +   C ++     GLQ+ CLA+  GF  +  V ++++ +
Sbjct: 338 MQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDL 397

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C A+  A+ VF  +  ++  +WN +++    N C  D +     +  SG+E +  T+
Sbjct: 398 YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTY 457

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C   ++ +    +HG  IK+G     ++ S+++  Y   G +  + +  +    
Sbjct: 458 GSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG 517

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ SW +++S       + EA   F  +++ G KPD +   T+L++CA +   +  K I
Sbjct: 518 QELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQI 577

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  +IK     + Y++S ++D YAKCG++  + + F+++    D + +N +I  YA HG 
Sbjct: 578 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKA-RKLDFVSWNAMICGYALHGQ 636

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+E+F++M+ AN+ P+ ATFV+V+ ACSH GL+D GC  F  M S+Y + P  + + 
Sbjct: 637 GLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFA 696

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R+   ++A   I  MP +    V+++LLS C+I  + E+ E A+  +L L P 
Sbjct: 697 CMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPD 756

Query: 752 NDAAHVLLSK--------------RKRQREGNLLDHEG 775
           + + ++LLS               R+  R+G L    G
Sbjct: 757 DASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPG 794



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 251/521 (48%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA  L     L    LG Q+H   VK G   D+   + L+ MY KC      LR F
Sbjct: 150 DRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFF 209

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ERN VSW   ++  +QN ++  G++++V M+  G   ++ A  S  + C +M    
Sbjct: 210 HGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLS 269

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               +H  A+K     +  VG ++++ YAK G++  A R F  +   +V   NAM+ G  
Sbjct: 270 TARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLV 329

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G G EA+ +   M   G+  D  +       C+ V  +  G Q+H L ++S  +  + 
Sbjct: 330 RTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVC 389

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++D+Y K   +  A+ VF+ M  +D +SWN +     +N+    T +  ++ + SG
Sbjct: 390 VRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSG 449

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+  T+  +L+ C  L  L+ GL +   A+  G   +  V+S+++ M+C+CGA+  A 
Sbjct: 450 MEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQ 509

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            + D +  + + +WN ++SG+       +  + F  + + GV+ +  T+  V++TC    
Sbjct: 510 KLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLA 569

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             ++  QIHG IIK       YI S+L+  Y   G + +S      A +LD  SW AM+ 
Sbjct: 570 TIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMIC 629

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                G   EA+ +F  +  A   P+      +L +C+ +G
Sbjct: 630 GYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVG 670



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 173/336 (51%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           QF + S +  D I L+   S    +K    G QVH   VK GF  D+ ++N ++ +Y KC
Sbjct: 342 QFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKC 401

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   VF EM +R+ VSW  I++A  QN  ++  +    +M  +G  P++F  GSV+
Sbjct: 402 KALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVL 461

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C  + + E+G  +H  A+K  +  + FV  +V++ Y K G +  A+++   I   ++ 
Sbjct: 462 KACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELV 521

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN++I G++      EA    S ML  G+  D +T+   L  C+ +A  ++G+QIHG I
Sbjct: 522 SWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQI 581

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+ E+     I + L+DMY K   M  +  +FE+    D +SWN +  G++ +    +  
Sbjct: 582 IKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEAL 641

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            +F +   +   PNH TF  +LR C  +  LD G Q
Sbjct: 642 EMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQ 677



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 2/284 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +  D       L     L+S   G  VHG  +K G   D F+ + ++ MY KCG    
Sbjct: 448 SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITE 507

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             ++ D +  + LVSW  I+S      + +   + + +M   G  P+ F   +V+  C +
Sbjct: 508 AQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCAN 567

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +   E G  IH   +K  +  + ++  ++++ YAK G++  +  +F      D   WNAM
Sbjct: 568 LATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAM 627

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSE 276
           I GYA  G G EAL +   M    +  +  TF+  L+ CS V   D G Q  H +  R +
Sbjct: 628 ICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYK 687

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
           +   +     ++D+  +S G   A +    M  + D + W TL 
Sbjct: 688 LVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLL 731



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 34/347 (9%)

Query: 349 TFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           TFS L + C       L  G       L  GF+    V++ L+ M+ RCG    AH VFD
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 407 NVSYK-------------------------------NITTWNELLSGYCFNCCDADVLKT 435
            + ++                               ++ +WN L+SGYC +    + +  
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +   GV ++  T   ++++C   ++  +  QIH   +KTG  +     S+L+  Y  
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGK 198

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
              LD++  F +G    +  SWGA ++  V        + +F  +   G    +    + 
Sbjct: 199 CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASA 258

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
             SCAA+      + +H   IK  F+++  V +A++D YAK G++  AR AF      ++
Sbjct: 259 FRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAF-IGLPHHN 317

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           V   N +++     GL +EAM++F  M  + +     +   V SAC+
Sbjct: 318 VETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA 364


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 210/791 (26%), Positives = 383/791 (48%), Gaps = 83/791 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           FL  ++S S+ +    LG   H  I+ L    + FL NNLI+MYSKCG   +  RVFD+M
Sbjct: 52  FLRDAISTSDLM----LGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKM 107

Query: 106 AERNLVSWTLIVSAAIQNGE-----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            ER+LVSW  I++A  Q+ E           ++  ++ +    +   +  ++K+C+  G 
Sbjct: 108 PERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 167

Query: 161 SEFGYSIHCFALKIRI---------------------------EKNPFVGCSVLNF---- 189
                S H +A KI +                           E+ P+    + N     
Sbjct: 168 VCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKA 227

Query: 190 YAKLG------DVAAA------------ERVFYSISSDD--------------------V 211
           Y ++G      D+++A             R+   IS DD                    +
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEI 287

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
              N ++ GY H G     L     M+   +  D+ TFI  L     +    +G+Q+H +
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            ++  ++  +++ N+LI+MY K   +  A  VF  M+++D+ISWN++  G +++    + 
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIY 390
             LF + +  G +P+H T + +L+    L + L L  Q+   A+    + +  V+++LI 
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALID 467

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
            + R   ++ A  +F   ++ ++  WN ++SGY  +      L+ F  + + G   +  T
Sbjct: 468 AYSRNRCMKEAEVLFGRNNF-DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFT 526

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGA 509
              V++TC          Q+H   IK+G+    ++ S ++  YV  G +  + F F +  
Sbjct: 527 LATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 586

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+A W  ++S  +  G    A+ +F  +   G  PDE+ + T+  + + + A ++ +
Sbjct: 587 VPDDVA-WTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 645

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH   +KL   ++ +V ++++D YAKCG I  A   F +     ++  +N +++  A H
Sbjct: 646 QIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQH 704

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   EA+++F +M+   ++P + TF+ V+SACSH GLV +     +SM   YG++P  + 
Sbjct: 705 GEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEH 764

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y CL D L R G +++A+++I+ M  + S ++YR+LL+ CR+ G+ E G+  + KLL L 
Sbjct: 765 YSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 824

Query: 750 PKNDAAHVLLS 760
           P + +A+VLLS
Sbjct: 825 PLDSSAYVLLS 835



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 205/426 (48%), Gaps = 2/426 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S L  D +     L+ +  L S  LG QVH   +KLG    + + N+LI MY K    G
Sbjct: 315 ESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIG 374

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               VF+ M+ER+L+SW  +++   Q+      + +++ +   G  P+ + + SV+K   
Sbjct: 375 LARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434

Query: 157 SMGAS-EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
           S+         IH  A+K     + FV  ++++ Y++   +  AE V +  ++ D+  WN
Sbjct: 435 SLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAE-VLFGRNNFDLVAWN 493

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           AM+ GY     G + L + + M  +G   D +T    L+ C  +   + G+Q+H   I+S
Sbjct: 494 AMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS 553

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             +  + + + ++DMY+K   M  A   F+ +   D ++W TL  G  EN    +   +F
Sbjct: 554 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVF 613

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +  L G  P+  T + L +    L  L+ G Q+   AL      +  V +SL+ M+ +C
Sbjct: 614 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKC 673

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G+++ A+ +F  +   NIT WN +L G   +    + L+ F  +   G++ +  TF  V+
Sbjct: 674 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVL 733

Query: 456 ETCCRS 461
             C  S
Sbjct: 734 SACSHS 739


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 190/666 (28%), Positives = 336/666 (50%), Gaps = 43/666 (6%)

Query: 130 LKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
           ++++V + ++ ++ P+ F + S +  C ++  +  G  +H ++++  ++    VG ++L+
Sbjct: 37  VQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLS 96

Query: 189 FYAKLGDVAAAERVFYSISSDDV--------GC-----------------------WNAM 217
           FYAK  D+ + +RVF  I + DV         C                       WNA+
Sbjct: 97  FYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAI 156

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G A   +   ALN+   M   G+  DKYTF + L  CSL    D GR++H L+I++  
Sbjct: 157 ITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLEL-LDFGREVHTLVIKTGF 215

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADK--DVISWNTLFGGFSENKNPGQTASLF 335
               S++NAL+ MY  S  +  A++VFE       D I++N + GG +      +   +F
Sbjct: 216 LVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMF 275

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +   +  RP  +TF  ++  C       +  Q+   A+  GF     V+++ + M+  C
Sbjct: 276 KEMQEACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSC 332

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +   H VFD +  K++ +WN ++  Y         +  F  +  +G+E +    F + 
Sbjct: 333 GNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDE---FTIG 389

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                SE+ ++V      + K G +S   + ++L+ ++   GQ++ +++  N     ++ 
Sbjct: 390 SLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLI 449

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  ++S  +  G   + +  F+ L+ +  KP+ Y L  +L+ CA+I A +  K IH ++
Sbjct: 450 SWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYI 509

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           ++ G  +   + +A+I  YAKCGD+  +   F+   N  D++ +N +I AYA HG   EA
Sbjct: 510 LRSGVFSVTSLGNALITMYAKCGDLDWSLRIFN-VMNGRDIVSWNAMISAYAQHGKGKEA 568

Query: 636 MEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           +  F  M+    ++P QATF +V+SACSH GLVD G  +F SM + YG +P  D   C+V
Sbjct: 569 VHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIV 628

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+L R GYLE+A+ +I     +   +++ +L S C  HGN  LG   +  LL +   + A
Sbjct: 629 DLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPA 688

Query: 755 AHVLLS 760
            +VLLS
Sbjct: 689 VYVLLS 694



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 162/634 (25%), Positives = 275/634 (43%), Gaps = 44/634 (6%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q  S ++L+ D   L+ +L+   NL+    G Q+H + ++ G      + N L++ Y+K 
Sbjct: 42  QIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKS 101

Query: 93  GYFGWGLRVFDEMAERNLVSWTL-------------------------------IVSAAI 121
                  RVF+E+   ++ SWT                                I++   
Sbjct: 102 KDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCA 161

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N   ++ L ++ +M   G   +++   SV+ +C S+   +FG  +H   +K        
Sbjct: 162 ENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRAS 220

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           V  ++L  Y   G VA A  VF    S   DD+  +N MIGG A  G   EAL +   M 
Sbjct: 221 VINALLTMYFNSGKVADAYEVFEEAESTVHDDI-TFNVMIGGLASVGRDEEALIMFKEMQ 279

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              +   + TF++ +  CS      +  Q+H   I+   E    + NA + MY     + 
Sbjct: 280 EACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLH 336

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
               VF+R+ +KD+ISWN +   +++          F +   +G  P+  T   LL    
Sbjct: 337 AVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE 396

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               L++    Q L    G   +  V+++L+  F + G +E A+ VF+N+S  N+ +WN 
Sbjct: 397 ---SLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNT 453

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++SG+ FN      L+ F  +  S ++ N  T   V+  C      +   QIHG I+++G
Sbjct: 454 IISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSG 513

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             S   + ++LI  Y   G LD S    N     D+ SW AM+SA    G   EAV  F 
Sbjct: 514 VFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFK 573

Query: 539 SLVEAGE-KPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           ++ ++G  KPD+     +L++C+  G     T+  +  V   GF       S ++D   +
Sbjct: 574 AMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGR 633

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            G ++ A    +         ++ TL  A A HG
Sbjct: 634 AGYLEEAERLINSKHLKIVSSIWWTLFSACAAHG 667



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 140/582 (24%), Positives = 256/582 (43%), Gaps = 53/582 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D    A  LSL  +L+    G +VH  ++K GF     + N L+ MY   G      
Sbjct: 181 VRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAY 239

Query: 100 RVFDEMAERNL---VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
            VF+E AE  +   +++ +++      G  +  L M+ +M+     P E    SVM  C 
Sbjct: 240 EVFEE-AESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCS 298

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S   S   + +H  A+K+  E    V  + +  Y+  G++ A   VF  +   D+  WN 
Sbjct: 299 SARVS---HQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNI 355

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I  YA   +   A+     M   GI  D++T I +L   S     +I +    L+ ++ 
Sbjct: 356 IIMNYAQGNFYRLAILAFLQMQRAGIEPDEFT-IGSLLASS--ESLEIVKMFQALVSKNG 412

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +   I + NAL+  + K   ++ A++VF  M+  ++ISWNT+  GF  N    Q    F+
Sbjct: 413 LNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFY 472

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + ++S  +PN  T SI+L  C  +  L  G Q+    L  G     ++ ++LI M+ +CG
Sbjct: 473 ELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCG 532

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVV 455
            ++ +  +F+ ++ ++I +WN ++S Y  +    + +  F  + +S GV+ +  TF  V+
Sbjct: 533 DLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVL 592

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C            H  ++  G                 F  + N + F  GA+ L   
Sbjct: 593 SACS-----------HAGLVDDGTRI--------------FNSMVNDYGFEPGADHLS-- 625

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
               ++  L   G+  EA  + +S      K    I  T+ ++CAA G  +  + +  F+
Sbjct: 626 ---CIVDLLGRAGYLEEAERLINS---KHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFL 679

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +++  N            Y    +I  A   ++++ N+ D++
Sbjct: 680 LEIEQNDPA--------VYVLLSNIYAAAGQWEEAANTRDLM 713



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 34/240 (14%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+ +   L+  LS+  ++ +   G Q+HG+I++ G  +   L N LI MY+KCG   W
Sbjct: 477 STLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDW 536

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCV 156
            LR+F+ M  R++VSW  ++SA  Q+G+    +  +  M+ + G  P++    +V+  C 
Sbjct: 537 SLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACS 596

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G  + G  I                 S++N Y             +   +D + C   
Sbjct: 597 HAGLVDDGTRIF---------------NSMVNDYG------------FEPGADHLSCIVD 629

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++G     GY  EA  +++S   + ++   +T  +A   C+   +  +GR + G ++  E
Sbjct: 630 LLG---RAGYLEEAERLINSKHLKIVSSIWWTLFSA---CAAHGNLRLGRIVAGFLLEIE 683


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 196/744 (26%), Positives = 367/744 (49%), Gaps = 49/744 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--A 119
            G+ +HG+ +KLG  +   L   L+ +Y+K G   +  ++F EM +R+ V W +++S  A
Sbjct: 57  FGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA 116

Query: 120 AIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             Q+ E ++ ++++  M   N   PN   +  V+ VC  +   + G S+H + +K  +E 
Sbjct: 117 GFQSHEAEV-MRLFRAMHMVNEAKPNSVTIAIVLPVCARL-REDAGKSVHSYVIKSGLES 174

Query: 179 NPFVGCSVLNFYAKLGDVAA-AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +   G ++++ YAK G V + A   F  I   DV  WNA+I G++   +  EA  +  +M
Sbjct: 175 HTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM 234

Query: 238 LFEGITMDKYTFINALQGCSLV---ADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK 293
           L   I  +  T  + L  C+ +   A +  G+++H  ++R  E+   +S++N+L+  Y++
Sbjct: 235 LKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLR 294

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSI 352
              M+ A  +F  M  +D++SWN +  G++ N    +   LF +FI L   +P+ VT   
Sbjct: 295 IGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 354

Query: 353 LLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
           +L  C  + +L +   +    + H G  ++ +V ++L+  + +C   + A   F  +S K
Sbjct: 355 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRK 414

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN +L  +  + C+  ++     +   G+  +  T   +++        + V + H
Sbjct: 415 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 474

Query: 472 GAIIKTG-----------------FSSCGYI------------------CSSLIKSYVNF 496
              I+ G                 ++ CG +                  C+S+I  YVN 
Sbjct: 475 SYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNS 534

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
              D+++   N     D+ +W  M+          +A+++FH L   G KPD   + +IL
Sbjct: 535 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 594

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +CA + +    +  H +VI+  FN +V +  A ID Y+KCG + GA   F  S    D+
Sbjct: 595 PACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSS-PQKDL 652

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           +++  ++  +A HG+  EA+ IF  M    ++P      +V+ ACSH GLVD+G  +F S
Sbjct: 653 VMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNS 712

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           ++  +G QP+ + Y C+VD+L+R G ++DA   +  MP + +  ++ +LL  CR H   E
Sbjct: 713 IEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVE 772

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           LG   ++ L  +   N   +V++S
Sbjct: 773 LGRVVADHLFKIESDNIGNYVVMS 796



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 160/654 (24%), Positives = 287/654 (43%), Gaps = 75/654 (11%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G+ PN   + +++K CV++ A  FG  +H +ALK+       +   +LN YAK G +   
Sbjct: 34  GYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 93

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM------DKYTFINAL 253
            ++F  +   D   WN ++ G A    GF++       LF  + M      +  T    L
Sbjct: 94  NKLFGEMDQRDPVIWNIVLSGLA----GFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVL 149

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM-DYAFKVFERMADKDV 312
             C+ + + D G+ +H  +I+S +E      NALI MY K   +   A+  F R+  KDV
Sbjct: 150 PVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDV 208

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD---LDLGLQL 369
           +SWN +  GFSENK   +   LFH  +    +PN+ T + +L  C  L +      G ++
Sbjct: 209 VSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEV 268

Query: 370 QCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
            C  L     +++ +V +SL+  + R G +E A  +F N+  +++ +WN +++GY  N  
Sbjct: 269 HCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGE 328

Query: 429 DADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK-TGFSSCGYIC 486
               L+ F   I    ++ +  T   V+  C    N Q+   IHG II+  G      + 
Sbjct: 329 WLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVG 388

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+  Y        + +      R D+ SW A++ A    G     V + H ++  G +
Sbjct: 389 NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIR 448

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF---NTEVYVASAVIDAYAKCGDIKGA 603
           PD   + TI+   AA+   ++ K  H + I+ G    +    + + ++DAYAKCG++K A
Sbjct: 449 PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYA 508

Query: 604 RMAFD-------------------------------QSFNSNDVIVYNTLIMAYAHHGLV 632
              F                                 + +  D+  +N ++  YA +   
Sbjct: 509 VNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFP 568

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSH----------KGLVDKGCLLFKSMDSQYG 682
            +A+ +F +++   ++P   T +S++ AC+H           G V + C     ++    
Sbjct: 569 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLN---- 624

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
                   G  +DM S+ G +  A  +    P Q    ++ +++ G  +HG  E
Sbjct: 625 --------GAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHGMGE 669



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + +   L    ++ S  +  Q HG++++  F ND+ L    I MYSKCG      
Sbjct: 583 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAY 641

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F    +++LV +T +V     +G  +  L+++  M   G  P+   + +V+  C   G
Sbjct: 642 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 701

Query: 160 ASEFGYSI 167
             + G+ I
Sbjct: 702 LVDEGWKI 709


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 212/711 (29%), Positives = 349/711 (49%), Gaps = 15/711 (2%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           + R  G  +H    K G   ++++   L+ +Y    +     R+F EM ERN+VSWT ++
Sbjct: 58  EGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALM 117

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
            A   NG  +  L  Y  M+      N  A  +V+ +C S+     G  +    +   ++
Sbjct: 118 VALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQ 177

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +   V  S+++    LG V  AE++FY +   D   WNA++  Y+H G   ++  V S M
Sbjct: 178 RQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDM 237

Query: 238 LFEGITMDKYTFINALQGCSLVADF-DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
              G+     T + +L      +D+   G  +H L +R+ +   I +VNAL++MY  +  
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A  +F  M+ +D+ISWNT+   + +N N         + + +   P+ +TFS  L  
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357

Query: 357 C---GKLLDLDL--GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
           C   G L+D  +   + LQ L+LH   L    V +SLI M+ +C ++E A  +F  +   
Sbjct: 358 CSSPGALMDGRMVHAMTLQ-LSLHHNLL----VGNSLITMYGKCNSIEDAERIFQLMPNH 412

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QI 470
           ++ + N L+  Y         ++ F  +    V++N  T   ++ +   S + +  G  +
Sbjct: 413 DVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPL 472

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H   I  GF S  Y+ +SLI  Y   G L++S           + SW AM++A V  GH 
Sbjct: 473 HAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHG 532

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            E++ +F  +   G   D   L   ++S A++ + +    +H   +K G   + +V +A 
Sbjct: 533 EESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAA 592

Query: 591 IDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +D Y KCG + +  +M  D +        +NTLI  YA +G   EA E F  M      P
Sbjct: 593 MDMYGKCGKMDEMLKMLPDPAIRPQQC--WNTLISGYARYGYFKEAEETFKHMISVGRTP 650

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV+++SACSH GLVDKG   + SM S +G+ P      C+VD+L R G   +A+  
Sbjct: 651 DYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKF 710

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           IE MP  P+  ++RSLLS  R H N ++G  A+++LL L P +D+A+VLLS
Sbjct: 711 IEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLS 761



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 248/518 (47%), Gaps = 2/518 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  +SL  +L+  V G QV  H++  G    + + N+LI+M    G      ++F  M E
Sbjct: 149 ATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEE 208

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYS 166
           R+ VSW  +VS     G      +++ DM+  G + ++   + S++ VC S     +G  
Sbjct: 209 RDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGSG 268

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   L+  +     V  +++N Y+  G +A AE +F+++S  D+  WN MI  Y   G 
Sbjct: 269 VHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRRDLISWNTMISSYVQNGN 328

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +AL  +  +L      D+ TF +AL  CS       GR +H + ++  +  ++ + N+
Sbjct: 329 NMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNS 388

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LI MY K + ++ A ++F+ M + DV+S N L G ++  ++  +   +F        + N
Sbjct: 389 LITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLN 448

Query: 347 HVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           ++T   +L       DL + GL L    +H GFL ++ V++SLI M+ +CG +E +++VF
Sbjct: 449 YITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVF 508

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
             +  +++ +WN +++    +    + LK F ++   G  ++       + +     + +
Sbjct: 509 QRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLE 568

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              Q+HG  +K G  +  ++ ++ +  Y   G++D   +            W  ++S   
Sbjct: 569 EGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYA 628

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             G+  EA   F  ++  G  PD     T+L++C+  G
Sbjct: 629 RYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAG 666



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 159/663 (23%), Positives = 279/663 (42%), Gaps = 47/663 (7%)

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF-GYS 166
           R   SW   +S  ++ G       M   M+  G   + FA+ S++  C         G +
Sbjct: 6   RTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAA 65

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH    K  +  N ++G ++L+ Y     V  A+R+F+ +   +V  W A++   +  G+
Sbjct: 66  IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL     M  E I  +   F   +  C  + D   G Q+   +I S ++  +S+ N+
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRP 345
           LI M      +  A K+F RM ++D +SWN L   +S      ++  +F      G  R 
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T   L+  C     +  G  +  L L  G      V ++L+ M+   G +  A  +F
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            N+S +++ +WN ++S Y  N  + D LKT   +  +    +  TF   +   C S    
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSAL-GACSSPGAL 364

Query: 466 MVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           M G+ +H   ++        + +SLI  Y     ++++          D+ S   ++ + 
Sbjct: 365 MDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSY 424

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS----IHPFVIKLGF 580
                  +A+ +F   +  GE    YI  TI+N   +  +    ++    +H + I  GF
Sbjct: 425 AVLEDGTKAMQVFF-WMRRGEVKLNYI--TIVNILGSFTSSNDLRNYGLPLHAYTIHAGF 481

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            ++ YV++++I  YAKCGD++ +   F +  N + V+ +N +I A   HG   E++++F 
Sbjct: 482 LSDDYVSNSLITMYAKCGDLESSNNVFQRIINRS-VVSWNAMIAANVQHGHGEESLKLFM 540

Query: 641 KMK----------LANLQPSQATFVSVMSACSHKGLVDKGCLLFKS-------------- 676
            M+          LA    S A+  S+       GL  K  L   S              
Sbjct: 541 DMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCG 600

Query: 677 -MDSQYGMQPSP-----DCYGCLVDMLSRNGYLEDA----KHVIEIMPFQPSPTVYRSLL 726
            MD    M P P      C+  L+   +R GY ++A    KH+I +    P    + +LL
Sbjct: 601 KMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISV-GRTPDYVTFVTLL 659

Query: 727 SGC 729
           S C
Sbjct: 660 SAC 662



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 193/421 (45%), Gaps = 1/421 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
            LR D   L   +S+  +      G+ VH   ++ G  + I + N L+ MYS  G     
Sbjct: 242 LLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA 301

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             +F  M+ R+L+SW  ++S+ +QNG     LK    +      P+     S +  C S 
Sbjct: 302 EFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSP 361

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           GA   G  +H   L++ +  N  VG S++  Y K   +  AER+F  + + DV   N +I
Sbjct: 362 GALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILI 421

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF-DIGRQIHGLIIRSEV 277
           G YA    G +A+ V   M    + ++  T +N L   +   D  + G  +H   I +  
Sbjct: 422 GSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGF 481

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                + N+LI MY K   ++ +  VF+R+ ++ V+SWN +     ++ +  ++  LF  
Sbjct: 482 LSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMD 541

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G+  +H+  +  +     L  L+ G+QL  L L CG  ++ +V ++ + M+ +CG 
Sbjct: 542 MRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGK 601

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++    +  + + +    WN L+SGY       +  +TF ++   G   +  TF  ++  
Sbjct: 602 MDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSA 661

Query: 458 C 458
           C
Sbjct: 662 C 662



 Score = 47.4 bits (111), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA+ +S S +L S   G Q+HG  +K G  ND  + N  + MY KCG     L++ 
Sbjct: 550 DHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKML 609

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            + A R    W  ++S   + G F    + +  M + G  P+     +++  C   G  +
Sbjct: 610 PDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVD 669

Query: 163 FG 164
            G
Sbjct: 670 KG 671


>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
 gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
          Length = 870

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 218/807 (27%), Positives = 386/807 (47%), Gaps = 62/807 (7%)

Query: 35  CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           C+  F R+D   +A  L     L +   G  +HG IV++G  +   +   L+ MY+KCG 
Sbjct: 16  CNGDF-RQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGA 74

Query: 95  FGWGLRVFDEMA---ERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMK-TNGFMPNEFAVG 149
                ++F E+    +R+ + W +++S    +  +D   L+++ +M   N   P+     
Sbjct: 75  LDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAA 134

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA-AERVFYSISS 208
            V+ VC  +G    G S++C+A+K  ++ +   G ++++ YAK G V   A   F SI  
Sbjct: 135 IVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDE 194

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD----- 263
            DV  WNA+I G+A      +A  + SSML   I  +  T  N L  C   A FD     
Sbjct: 195 KDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVC---ASFDEYIAY 251

Query: 264 -IGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
             G++IHG ++R +E+   + + NAL+  Y++   ++ A  +F RM  +D++SWN +  G
Sbjct: 252 WFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIAG 311

Query: 322 FSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFL 379
           ++ N    +   LFH+ + L    P+ VT   ++  C +  +L +G  +    L H    
Sbjct: 312 YASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLC 371

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           ++ +V ++L+  + +C  +E A+  F  +S +++ +WN +L     +  +   L+    +
Sbjct: 372 EDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWM 431

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIH-------------------GAIIKTGFS 480
              G   +  T   VV  C     +  V + H                   G  I   ++
Sbjct: 432 LSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYA 491

Query: 481 SCGYI------------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
            CG I                    ++I  Y+N G LD ++   N     D++ W  M+ 
Sbjct: 492 KCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVR 551

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                  + +A+ +FH L   G KPD   + ++L +CA + + Q  K  H + I+  F  
Sbjct: 552 LYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCFG- 610

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           ++++  A+ D YAKCG I  A   F Q   + D+I++  +I  YA HG+  EA+  F  M
Sbjct: 611 DLHLDGALQDVYAKCGSIGYAFKLF-QLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHM 669

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
               ++P      +V+SACSH GLVD+G  +F S++  +GM+ + + Y C+VD+L+R G 
Sbjct: 670 IELGIKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGR 729

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKR 762
           ++DA  ++  MP + +  ++ +LL  CR H   ELG + +++L  +  +N   +V+LS  
Sbjct: 730 IDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIGNYVVLSNL 789

Query: 763 KRQREGNLLDHEGVCNVNDGIKTVDLK 789
                      +GV  +   ++T DLK
Sbjct: 790 YAADA----RWDGVMEIRKLMRTRDLK 812



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/531 (23%), Positives = 253/531 (47%), Gaps = 29/531 (5%)

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-S 275
           M+G Y       +A N + S        D     + L+ C+ ++    GR +HG I+R  
Sbjct: 1   MVGPY------LKAWNTMISDCNGDFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIG 54

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMA---DKDVISWNTLFGGFSENK-NPGQT 331
            V C  ++  AL++MY K   +D + K+F  +    D+D I WN L  G++ ++    +T
Sbjct: 55  HVSCH-AVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAET 113

Query: 332 ASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             LF +   +   +P+ VT +I+L  C +L D+ +G  + C A+  G        ++L+ 
Sbjct: 114 LRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNALVS 173

Query: 391 MFCRCGAV-EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
           M+ +CG V + A++ FD++  K++ +WN ++SG+  N    D  + F ++ +  ++ N  
Sbjct: 174 MYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYT 233

Query: 450 TFFYVVETCCRSENQQMV---GQIHGAIIK-TGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           T   ++  C   +         +IHG +++     +  ++ ++L+  Y+  G+++ +   
Sbjct: 234 TLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELL 293

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGA 564
               E  D+ SW A+++     G   +A+ +FH L+     +PD   L  I+ +CA    
Sbjct: 294 FRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRN 353

Query: 565 YQRTKSIHPFVIKLGFNTE-VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
               K IH +V++     E   V +A++  YAKC DI+GA   F    +  D+I +N+++
Sbjct: 354 LHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFM-ISRRDLISWNSML 412

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG------CLLFKSM 677
            A    G  +  +E+   M      P   T +SV+  C +    DK        +  + +
Sbjct: 413 DALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLL 472

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            S++ ++P+      ++D  ++ G +E A  V + +    +   +++++SG
Sbjct: 473 ASKFDVEPTIG--NAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISG 521


>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/701 (27%), Positives = 350/701 (49%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F  +  RN+ SW  I+   
Sbjct: 67  GQQIHARILKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLK 126

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG +P+ + V +V K C ++  S FG  +H + LK  +    
Sbjct: 127 CRIGLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCV 186

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A  VF  I   +V  WNA++ GY   G   EA+ ++S M  E
Sbjct: 187 FVASSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKE 246

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   ++YA
Sbjct: 247 GIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA 306

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+R+  KD+++WN L  G+ +         +     L   R + VT S L+    + 
Sbjct: 307 EMIFDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAART 366

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L+LG ++QC ++   F  E  + SS + M+ +CG++  A  VF++ + K++  WN LL
Sbjct: 367 QNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLL 426

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + LK F ++    V  N  T+  ++ +  R+      GQ+  A       
Sbjct: 427 AAYADSGLSGEALKLFYDMLLESVPPNIITWNSIILSFLRN------GQVDEA------- 473

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      + SW  MM+  V  G + EA+     +
Sbjct: 474 ------------KEMFLQMQSSGIFPN------LISWTTMMNGWVQNGCSEEAIIFLRKM 515

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++C  + +    +SIH ++I+    ++ V   ++++D YAKCGD
Sbjct: 516 QESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGD 575

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F      +++ ++N +I AYA +G V E++ ++ +++   ++P   TF S++ 
Sbjct: 576 INQAEKVFGNKL-YDELPLHNAMISAYALYGNVKESITLYRRLEDMAMKPDNITFTSLLY 634

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+H G + +   +F  M S++ M+P  + YG +VD+L+ +G    A  +IE MP++P  
Sbjct: 635 ACTHAGDIVQAINIFTEMVSKHDMKPCLEHYGLMVDILASSGETNKALELIEEMPYKPDA 694

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL++ C      EL ++ S +LL   P+N   +V +S
Sbjct: 695 RMIQSLVASCNKQHKTELVDYLSRQLLESEPENSGNYVTIS 735



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 236/516 (45%), Gaps = 27/516 (5%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNA 286
           EAL +V  M F  + +    +   LQGC    D   G+QIH  I+++    + +  I   
Sbjct: 31  EALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGAFYARNEYIETK 90

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F R+  ++V SW  + G     G  E    G     F + + +
Sbjct: 91  LLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLKCRIGLCEGALLG-----FVEMLEN 145

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P++     + + CG L     G  +    L  G  D   V SSL  M+ +CG ++ A
Sbjct: 146 GVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVLDDA 205

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN L+ GY  N  + + ++   ++ + G+E    T      + C S
Sbjct: 206 RMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTV-----STCLS 260

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  M G     Q H   I  G      + +S++  Y   G ++ +    +     D+ +
Sbjct: 261 ASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVT 320

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG   +A+ +   +     + D   L T++++ A        K +  + I
Sbjct: 321 WNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSI 380

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  F +E+ +AS+ +D YAKCG I  A+  F +S    D+I++NTL+ AYA  GL  EA+
Sbjct: 381 RHSFESEIVLASSTVDMYAKCGSIVDAKKVF-ESTAEKDLILWNTLLAAYADSGLSGEAL 439

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           ++F  M L ++ P+  T+ S++ +    G VD+   +F  M S  G+ P+   +  +++ 
Sbjct: 440 KLFYDMLLESVPPNIITWNSIILSFLRNGQVDEAKEMFLQMQSS-GIFPNLISWTTMMNG 498

Query: 697 LSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
             +NG  E+A   +  M     +P+       LS C
Sbjct: 499 WVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSAC 534



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/525 (20%), Positives = 211/525 (40%), Gaps = 83/525 (15%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 253 VTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDR 312

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  +++V+W L++S  +Q G  D  + M   M+      +   + ++M           G
Sbjct: 313 IIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLG 372

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C++++   E    +  S ++ YAK G +  A++VF S +  D+  WN ++  YA  
Sbjct: 373 KEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADS 432

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   ML E +  +  T+                                   
Sbjct: 433 GLSGEALKLFYDMLLESVPPNIITW----------------------------------- 457

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N++I  ++++  +D A ++F +M       ++ISW T+  G+ +N    +      K   
Sbjct: 458 NSIILSFLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGWVQNGCSEEAIIFLRKMQE 517

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAV 398
           SG RPN  T S+ L  C  L+ L+ G  +    +   F    +V+  +SL+ ++ +CG +
Sbjct: 518 SGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIR-NFQHSSSVSFETSLVDLYAKCGDI 576

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  VF N  Y  +   N ++S Y       + +  +  + +  ++ +  TF  ++  C
Sbjct: 577 NQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITLYRRLEDMAMKPDNITFTSLLYAC 636

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-- 516
             +          G I++                 +N         F+    + DM    
Sbjct: 637 THA----------GDIVQA----------------INI--------FTEMVSKHDMKPCL 662

Query: 517 --WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             +G M+  L   G  ++A+ +     E   KPD  ++ +++ SC
Sbjct: 663 EHYGLMVDILASSGETNKALELIE---EMPYKPDARMIQSLVASC 704



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 40/323 (12%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D + L+  +S +   ++  LG +V  + ++  F ++I L ++ + MY+KCG      
Sbjct: 349 LRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASSTVDMYAKCGSIVDAK 408

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+  AE++L+ W  +++A   +G     LK++ DM      PN     S+        
Sbjct: 409 KVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPPNIITWNSI-------- 460

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD----DVGCWN 215
                                     +L+F  + G V  A+ +F  + S     ++  W 
Sbjct: 461 --------------------------ILSFL-RNGQVDEAKEMFLQMQSSGIFPNLISWT 493

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            M+ G+   G   EA+  +  M   G+  + +T   AL  C+ +   + GR IHG IIR+
Sbjct: 494 TMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRN 553

Query: 276 -EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
            +   S+S   +L+D+Y K   ++ A KVF      ++   N +   ++   N  ++ +L
Sbjct: 554 FQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITL 613

Query: 335 FHKFILSGSRPNHVTFSILLRQC 357
           + +      +P+++TF+ LL  C
Sbjct: 614 YRRLEDMAMKPDNITFTSLLYAC 636



 Score = 42.4 bits (98), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   ++ +LS   +L S   G  +HG+I++    ++ +  + +L+ +Y+KCG  
Sbjct: 517 ESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDI 576

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VF       L     ++SA    G     + +Y  ++     P+     S++  C
Sbjct: 577 NQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITLYRRLEDMAMKPDNITFTSLLYAC 636

Query: 156 VSMG 159
              G
Sbjct: 637 THAG 640


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 179/575 (31%), Positives = 298/575 (51%), Gaps = 2/575 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++N Y   G +  A   F ++    +  WNA++ G    G+  +A++   SML  G+T D
Sbjct: 73  LVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPD 132

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            YT+   L+ CS +    +GR +H   +  + + ++ +  A+IDM+ K   ++ A ++FE
Sbjct: 133 NYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFE 191

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M D+D+ SW  L  G   N    +   LF K    G  P+ V  + +L  CG+L  + L
Sbjct: 192 EMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKL 251

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G+ LQ  A+  GF  +  V++++I M+C+CG    AH VF ++ Y ++ +W+ L++GY  
Sbjct: 252 GMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQ 311

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           NC   +  K +  +   G+  N      V+    + E  +   ++H  ++K G  S   +
Sbjct: 312 NCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVV 371

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            S+LI  Y N G +  +          D+  W +M+      G    A   F  +  A  
Sbjct: 372 GSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH 431

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P+   + +IL  C  +GA ++ K IH +V K G    V V +++ID Y+KCG ++    
Sbjct: 432 RPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEK 491

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F Q    N V  YNT+I A   HG   + +  +++MK    +P++ TF+S++SACSH G
Sbjct: 492 VFKQMMVRN-VTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAG 550

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           L+D+G LL+ SM + YG++P+ + Y C+VD++ R G L+ A   I  MP  P   V+ SL
Sbjct: 551 LLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSL 610

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  CR+H   EL E  +E++L L   +   +VLLS
Sbjct: 611 LGACRLHNKVELTELLAERILQLKADDSGHYVLLS 645



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/628 (24%), Positives = 277/628 (44%), Gaps = 9/628 (1%)

Query: 66  VHGHIVKLGF-----TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +H  ++ LGF      +     + L+ +Y   G        F  +  + +++W  I+   
Sbjct: 49  LHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGL 108

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +  G F   +  Y  M  +G  P+ +    V+K C S+ A + G  +H   +  + + N 
Sbjct: 109 VAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVH-ETMHGKTKANV 167

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V C+V++ +AK G V  A R+F  +   D+  W A+I G    G   EAL +   M  E
Sbjct: 168 YVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSE 227

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D     + L  C  +    +G  +    +RS  E  + + NA+IDMY K      A
Sbjct: 228 GLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEA 287

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF  M   DV+SW+TL  G+S+N    ++  L+   I  G   N +  + +L   GKL
Sbjct: 288 HRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKL 347

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++    L  G + +  V S+LI M+  CG+++ A S+F+  S K+I  WN ++
Sbjct: 348 ELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMI 407

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY           TF  IW +    N  T   ++  C +    +   +IHG + K+G  
Sbjct: 408 VGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLG 467

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SLI  Y   G L+   +        ++ ++  M+SA    G   + +  +  +
Sbjct: 468 LNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQM 527

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E G +P++    ++L++C+  G   R   ++  +I   G    +   S ++D   + GD
Sbjct: 528 KEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGD 587

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           + GA     +   + D  V+ +L+ A   H  V E  E+  + ++  L+   +    ++S
Sbjct: 588 LDGAYKFITRMPMTPDANVFGSLLGACRLHNKV-ELTELLAE-RILQLKADDSGHYVLLS 645

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
                G   +     +SM    G++  P
Sbjct: 646 NLYASGKRWEDMSKVRSMIKDKGLEKKP 673



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 2/331 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D + +A  L     L++  LG  +    V+ GF +D+++ N +I MY KCG      
Sbjct: 229 LMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAH 288

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF  M   ++VSW+ +++   QN  +    K+Y+ M   G   N     SV+     + 
Sbjct: 289 RVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLE 348

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  +H F LK  +  +  VG +++  YA  G +  AE +F   S  D+  WN+MI 
Sbjct: 349 LLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIV 408

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKY-TFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           GY   G  FE+       ++       + T ++ L  C+ +     G++IHG + +S + 
Sbjct: 409 GYNLVG-DFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLG 467

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++S+ N+LIDMY K   ++   KVF++M  ++V ++NT+      +    +  + + + 
Sbjct: 468 LNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQM 527

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
              G+RPN VTF  LL  C     LD G  L
Sbjct: 528 KEEGNRPNKVTFISLLSACSHAGLLDRGWLL 558



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 2/261 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  ++K G  +D+ + + LI MY+ CG       +F+  ++++++ W  ++     
Sbjct: 353 GKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNL 412

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+F+     +  +      PN   V S++ +C  MGA   G  IH +  K  +  N  V
Sbjct: 413 VGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSV 472

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++ Y+K G +   E+VF  +   +V  +N MI      G G + L     M  EG 
Sbjct: 473 GNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN 532

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAF 301
             +K TFI+ L  CS     D G  ++  +I    +E ++   + ++D+  ++  +D A+
Sbjct: 533 RPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAY 592

Query: 302 KVFERMA-DKDVISWNTLFGG 321
           K   RM    D   + +L G 
Sbjct: 593 KFITRMPMTPDANVFGSLLGA 613


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 306/596 (51%), Gaps = 2/596 (0%)

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           Y I  F +K            V++ + K G  + A RVF  +       ++ M+ GYA  
Sbjct: 64  YQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKN 123

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +AL     M+ + + +    +   LQ C    D   GR+IHGLII +  E ++ ++
Sbjct: 124 SSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVM 183

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            A++ +Y K   +D A+K+FERM  KD++SW TL  G+++N +  +   L  +   +G +
Sbjct: 184 TAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQK 243

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ VT   +L     +  L +G  +   A   GF    NVT++L+ M+ +CG+  +A  V
Sbjct: 244 PDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLV 303

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +  K + +WN ++ G   N    +   TF  + + G      T   V+  C    + 
Sbjct: 304 FKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDL 363

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +    +H  + K    S   + +SLI  Y    ++D +    N  E+ ++ +W AM+   
Sbjct: 364 ERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGY 422

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G   EA+ +F  +   G K D + L  ++ + A     ++ K IH   ++   +  V
Sbjct: 423 AQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNV 482

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V++A++D YAKCG IK AR  FD       VI +N +I  Y  HG+  E +++F++M+ 
Sbjct: 483 FVSTALVDMYAKCGAIKTARKLFDM-MQERHVITWNAMIDGYGTHGVGKETLDLFNEMQK 541

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             ++P+  TF+SV+SACSH G V++G LLFKSM   Y ++P+ D Y  +VD+L R G L+
Sbjct: 542 GAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLD 601

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           DA + I+ MP +P  +V  ++L  C+IH N ELGE A++KL  L P     HVLL+
Sbjct: 602 DAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLA 657



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/650 (24%), Positives = 289/650 (44%), Gaps = 22/650 (3%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           S+ L EN  S+    Q+   I+K GF N+   Q  +I+++ K G      RVF+ +  + 
Sbjct: 50  SVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL 109

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
            V + +++    +N      L  ++ M  +           ++++C      + G  IH 
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHG 169

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +    E N FV  +V++ YAK   +  A ++F  +   D+  W  ++ GYA  G+   
Sbjct: 170 LIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKR 229

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +V  M   G   D  T ++ L   + +    IGR IHG   RS  E  +++ NAL+D
Sbjct: 230 ALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLD 289

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K      A  VF+ M  K V+SWNT+  G ++N    +  + F K +  G  P  VT
Sbjct: 290 MYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              +L  C  L DL+ G  +  L          +V +SLI M+ +C  V++A S+F+N+ 
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLE 409

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             N+ TWN ++ GY  N C  + L  FC +   G++++  T   V+         +    
Sbjct: 410 KTNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKW 468

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IHG  ++    +  ++ ++L+  Y   G +  + +  +  +   + +W AM+      G 
Sbjct: 469 IHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGV 528

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             E + +F+ + +   KP++    +++++C+  G  +        ++      E Y    
Sbjct: 529 GKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG------LLLFKSMQEDYYLEP 582

Query: 590 VIDAYAKCGDIKGARMAFDQSFN-------SNDVIVYNTLIMAYAHHGLVSEAMEIFDK- 641
            +D Y+   D+ G     D ++N          + V   ++ A   H    + +E+ +K 
Sbjct: 583 TMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIH----KNVELGEKA 638

Query: 642 -MKLANLQPSQATF-VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             KL  L P +  + V + +  +   + DK   +  +M+ + G+  +P C
Sbjct: 639 AQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDK-GLHKTPGC 687



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 168/320 (52%), Gaps = 7/320 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + L   L    ++K+  +G  +HG+  + GF + + + N L+ MY KCG       
Sbjct: 243 KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARL 302

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF  M  + +VSW  ++    QNGE +     ++ M   G +P    +  V+  C ++G 
Sbjct: 303 VFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGD 362

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G+ +H    K++++ N  V  S+++ Y+K   V  A  +F ++   +V  WNAMI G
Sbjct: 363 LERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILG 421

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ---IHGLIIRSEV 277
           YA  G   EALN+   M  +GI +D +T +  +   + +ADF + RQ   IHGL +R+ +
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVI---TALADFSVNRQAKWIHGLAVRACM 478

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ +  AL+DMY K   +  A K+F+ M ++ VI+WN +  G+  +    +T  LF++
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538

Query: 338 FILSGSRPNHVTFSILLRQC 357
                 +PN +TF  ++  C
Sbjct: 539 MQKGAVKPNDITFLSVISAC 558


>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
 gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
          Length = 785

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 193/683 (28%), Positives = 336/683 (49%), Gaps = 17/683 (2%)

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           + MY  CG      RVFD M  RN+++WT ++ A       +   K++  M+  GF  N 
Sbjct: 103 LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTS-LEQAFKVFRLMELEGFKSNF 161

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
               ++++ C      E G  +H  +++        +  +++  Y + G +  A  +F S
Sbjct: 162 VTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSS 221

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   D+  WNA+I  Y   G+  EA+ +   ML EG   DK TF+  L   +        
Sbjct: 222 MVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEV 281

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           + +H  I+ S V  +I++  AL+ MY K   ++    +FE+M  ++VISWN +   ++++
Sbjct: 282 KLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKH 341

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               +   +     L G +P++VT   LL  C    DL LG ++       G++ E    
Sbjct: 342 GLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVH------GWIAEGRCE 395

Query: 386 S------SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           +      SL+ M+ RCG VE A  VFD +  +N+ +W  +L+ Y         L  F  I
Sbjct: 396 ADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAI 455

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             SGV+    TF   ++ C  +E       +H   +++G      + S+L+  Y   G +
Sbjct: 456 HLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSI 515

Query: 500 -DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            D    F +   R +  +W AM++A V  G + E +     + + G         + L++
Sbjct: 516 RDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSA 575

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEV-YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C+ +   +  K IH +V +  F+TE   V ++++  Y KCG +  AR  F+ S    D I
Sbjct: 576 CSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETS-RRQDTI 634

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +N +I  YA H    +A+E+F +M+   + P   TFV ++S CSH GL+D+G   + SM
Sbjct: 635 CWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASM 694

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
             + G++P+ D Y C++D+L R G L++A+  I+ +  +P+     SLLS C+ HG+ + 
Sbjct: 695 -VELGLEPTQDNYACVIDLLGRAGKLQEAEEFIQSLGTRPAIETLTSLLSSCKSHGDVQR 753

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
           G  A+E ++ + P++ +AHV+LS
Sbjct: 754 GRRAAEGIMEMDPRSSSAHVVLS 776



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 153/684 (22%), Positives = 300/684 (43%), Gaps = 37/684 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L     +K+  +  ++H  IV+    N +FL N+LI  Y KC         F+ M+ +N+
Sbjct: 2   LQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 61

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +WT I+    Q+    + + +   M   G  P+   +                      
Sbjct: 62  YTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITL---------------------- 99

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                         + L  Y   G V  A+RVF ++ + +V  W AMIG +A      +A
Sbjct: 100 -------------LAALTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSLE-QA 145

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
             V   M  EG   +  T++  +Q CS     ++G  +H   + S       + NALI M
Sbjct: 146 FKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITM 205

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y +   ++ A  +F  M ++D+I+WN L   + ++ +  +   L+   +  G +P+ VTF
Sbjct: 206 YGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTF 265

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             LL        L     +    +  G      + ++L+ M+ +C ++E    +F+ +  
Sbjct: 266 VALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQ 325

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +N+ +WN +++ Y  +      ++    +   GV+ +  T   ++  C  S + ++  ++
Sbjct: 326 RNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKV 385

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           HG I +    +   + +SL+  Y   G+++ +    +G  + ++ SW AM++A   Q   
Sbjct: 386 HGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQ 445

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             A+ +FH++  +G KP        L++C    A  + + +H   ++ G + +V + SA+
Sbjct: 446 DMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDIDVSLGSAL 505

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           +  Y +CG I+ A+  FD +    + + ++ +I A+  HG   E ++    M+   L  S
Sbjct: 506 VAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMS 565

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
            ATF S +SACS+   + +G  +   +  +     +      LV M  + G L+ A+ V 
Sbjct: 566 PATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVF 625

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGN 734
           E    Q +   + +++SG   H  
Sbjct: 626 ETSRRQDT-ICWNAIISGYAQHSQ 648



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 268/597 (44%), Gaps = 4/597 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +H   V+     +  L N LI MY +CG       +F  M ER++++W  +++   
Sbjct: 179 VGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNALITEYG 238

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G  +  + +Y  M   G  P++    +++ +     A      +H   ++  +  N  
Sbjct: 239 QHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIA 298

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G +++  Y+K   +     +F  +   +V  WN M+  YA  G G +A+ +   M  +G
Sbjct: 299 LGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDG 358

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T +  L  C+  AD  +GR++HG I     E  + + N+L++MY +   ++ A 
Sbjct: 359 VKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAE 418

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF+ +  ++VISW  +   +S          LFH   LSG +P  +TF   L  C    
Sbjct: 419 MVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAE 478

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELL 420
            LD G  +   A+  G   + ++ S+L+ M+ RCG++  A + FD+    KN  TW+ ++
Sbjct: 479 ALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMI 538

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF- 479
           + +  +  D + L+    + + G++++  TF   +  C    + +   +IH  + +  F 
Sbjct: 539 AAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFD 598

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +    + +SL+  Y   G LD + E    + R D   W A++S         +AV +FH 
Sbjct: 599 TEAATVTNSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHR 658

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + + G  PD      IL+ C+  G        +  +++LG        + VID   + G 
Sbjct: 659 MQQEGVAPDPVTFVCILSVCSHGGLLDEGVYAYASMVELGLEPTQDNYACVIDLLGRAGK 718

Query: 600 IKGARMAFDQSFNSNDVI-VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           ++ A   F QS  +   I    +L+ +   HG V       + +   + + S A  V
Sbjct: 719 LQEAE-EFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVV 774



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 236/531 (44%), Gaps = 36/531 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D +     L++S   ++      VH HIV+ G + +I L   L+AMYSKC        
Sbjct: 259 KPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRW 318

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F++M +RN++SW ++V+A  ++G     +++   M+ +G  P+      ++ VC     
Sbjct: 319 LFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSAD 378

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  +H +  + R E +  +  S+LN Y + G+V  AE VF  I   +V  W AM+  
Sbjct: 379 LKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTA 438

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y+       AL +  ++   G+     TF+ AL  C      D GR +H   ++S  +  
Sbjct: 439 YSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSGNDID 498

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +S+ +AL+ MY +   +  A   F+     K+ ++W+ +   F ++    +         
Sbjct: 499 VSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQ 558

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFCRCGAV 398
             G   +  TF+  L  C  L DL  G ++        F  E   VT+SL+ M+ +CG++
Sbjct: 559 QQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSL 618

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  VF+    ++   WN ++SGY  +    D ++ F  + + GV  +  TF  ++  C
Sbjct: 619 DCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVC 678

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                       HG ++  G     Y  +S+++  +   Q DN               + 
Sbjct: 679 S-----------HGGLLDEGV----YAYASMVELGLEPTQ-DN---------------YA 707

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
            ++  L   G   EA     SL   G +P    L ++L+SC + G  QR +
Sbjct: 708 CVIDLLGRAGKLQEAEEFIQSL---GTRPAIETLTSLLSSCKSHGDVQRGR 755



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 130/588 (22%), Positives = 255/588 (43%), Gaps = 38/588 (6%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C  + A +    +H   ++  ++   F+G  +++ Y K   +  A   F  +S  +
Sbjct: 1   LLQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKN 60

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A+IG  A       A+ ++  ML EG+  D  T + AL                 
Sbjct: 61  VYTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALT---------------- 104

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
                              MY     +D A +VF+ M  ++VI+W  + G  +   +  Q
Sbjct: 105 -------------------MYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVT-SLEQ 144

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +F    L G + N VT+  L++ C K   L++G+ L   ++      E  + ++LI 
Sbjct: 145 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 204

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ RCG +E A ++F ++  ++I  WN L++ Y  +    + +  +  + + G + +  T
Sbjct: 205 MYGRCGRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDKVT 264

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++      E    V  +H  I+++G S    + ++L+  Y     L+++        
Sbjct: 265 FVALLTMSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMP 324

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           + ++ SW  M++A    G   +AV I   +   G KPD      +LN C      +  + 
Sbjct: 325 QRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRK 384

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H ++ +     ++ + +++++ Y +CG+++ A M FD     N VI +  ++ AY+   
Sbjct: 385 VHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRN-VISWTAMLTAYSRQN 443

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
               A+ +F  + L+ ++P+  TF+  + AC     +DKG  L  S   Q G        
Sbjct: 444 RQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKG-RLVHSCAVQSGNDIDVSLG 502

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             LV M  R G + DAK   +    + +   + ++++    HG    G
Sbjct: 503 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREG 550


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 174/599 (29%), Positives = 313/599 (52%), Gaps = 6/599 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   LK+ +  + FV   +   YA+   +  A ++F       V  WNA++  Y   G 
Sbjct: 23  LHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 227 GFEALNVVSSMLFEGIT---MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
             E L++   M  + IT    D YT   AL+ CS +   ++G+ IHG + + +++  + +
Sbjct: 83  WVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFV 142

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSG 342
            +ALI++Y K   M+ A KVF     +DV+ W ++  G+ +N +P    + F + + L  
Sbjct: 143 GSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 202

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+ VT       C +L D +LG  +       GF  +  + +S++ ++ + G++  A 
Sbjct: 203 VSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAA 262

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           ++F  + YK+I +W+ +++ Y  N  + + L  F  + +  +E+N  T    +  C  S 
Sbjct: 263 NLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSS 322

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           N +    IH   +  GF     + ++L+  Y+      N+ +  N   + D+ SW  + S
Sbjct: 323 NLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFS 382

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                G  H+++ +F +++  G +PD   L  IL + + +G  Q+   +H FV K GF+ 
Sbjct: 383 GYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDN 442

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             ++ +++I+ YAKC  I  A   F +     DV+ ++++I AY  HG   EA+++F +M
Sbjct: 443 NEFIGASLIELYAKCSSIDNANKVF-KGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQM 501

Query: 643 -KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
              ++++P+  TFVS++SACSH GL+++G  +F  M ++Y + P+ + YG +VD+L R G
Sbjct: 502 SNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMG 561

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            L+ A  +I  MP Q  P V+ +LL  CRIH N ++GE A+  L LL P +   + LLS
Sbjct: 562 ELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 620



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 272/561 (48%), Gaps = 10/561 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           + L E   S++   Q+H   +K+G  +D F+   L  +Y++        ++F+E   + +
Sbjct: 8   VKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM---PNEFAVGSVMKVCVSMGASEFGYSI 167
             W  ++ +    G++   L ++  M  +      P+ + V   +K C  +   E G  I
Sbjct: 68  YLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMI 127

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H F  K +I+ + FVG +++  Y+K G +  A +VF      DV  W ++I GY   G  
Sbjct: 128 HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187

Query: 228 FEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             AL   S M + E ++ D  T ++A   C+ ++DF++GR +HG + R   +  + + N+
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 247

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++++Y K+  +  A  +F  M  KD+ISW+++   +++N       +LF++ I      N
Sbjct: 248 ILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 307

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT    LR C    +L+ G  +  LA++ GF  +  V+++L+ M+ +C + + A  +F+
Sbjct: 308 RVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFN 367

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  K++ +W  L SGY         L  FCN+   G   +      ++         Q 
Sbjct: 368 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQ 427

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              +H  + K+GF +  +I +SLI+ Y     +DN+ +   G  R D+ +W ++++A   
Sbjct: 428 ALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGF 487

Query: 527 QGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQR-TKSIHPFV--IKLGFNT 582
            G   EA+ +F+ +    + KP++    +IL++C+  G  +   K  H  V   +L  NT
Sbjct: 488 HGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNT 547

Query: 583 EVYVASAVIDAYAKCGDIKGA 603
           E Y    ++D   + G++  A
Sbjct: 548 EHY--GIMVDLLGRMGELDKA 566



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 224/448 (50%), Gaps = 14/448 (3%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSE--NLKSRVLGTQVHGHIVKLGFTNDIF 80
           K +  L   +Q  +D+   + P     S++L     L+   LG  +HG + K    ND+F
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-N 139
           + + LI +YSKCG     ++VF E  ++++V WT I++   QNG  ++ L  +  M    
Sbjct: 142 VGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 201

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
              P+   + S    C  +     G S+H F  +   +    +  S+LN Y K G + +A
Sbjct: 202 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRSA 261

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             +F  +   D+  W++M+  YA  G    ALN+ + M+ + I +++ T I+AL+ C+  
Sbjct: 262 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 321

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           ++ + G+ IH L +    E  I++  AL+DMY+K      A  +F RM  KDV+SW  LF
Sbjct: 322 SNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLF 381

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC--- 376
            G++E     ++  +F   +  G+RP+ +    +L         +LG+  Q L LH    
Sbjct: 382 SGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASS-----ELGIVQQALCLHAFVS 436

Query: 377 --GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             GF + E + +SLI ++ +C +++ A+ VF  +  K++ TW+ +++ Y F+    + LK
Sbjct: 437 KSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALK 496

Query: 435 TFCNIW-ESGVEVNGCTFFYVVETCCRS 461
            F  +   S V+ N  TF  ++  C  +
Sbjct: 497 LFYQMSNHSDVKPNDVTFVSILSACSHA 524



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/480 (22%), Positives = 214/480 (44%), Gaps = 19/480 (3%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+H   ++  +     +V  L  +Y + + + +A K+FE    K V  WN L   +    
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 327 NPGQTASLFHKF---ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
              +T SLFH+     ++  RP++ T SI L+ C  L  L+LG  +       GFL ++ 
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIH------GFLKKKK 135

Query: 384 ------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 V S+LI ++ +CG +  A  VF     +++  W  +++GY  N      L  F 
Sbjct: 136 IDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFS 195

Query: 438 N-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +    V  +  T       C +  +  +   +HG + + GF +   + +S++  Y   
Sbjct: 196 RMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKT 255

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G + ++          D+ SW +M++     G    A+ +F+ +++   + +   + + L
Sbjct: 256 GSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISAL 315

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +CA+    +  K IH   +  GF  ++ V++A++D Y KC   K A   F++     DV
Sbjct: 316 RACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNR-MPKKDV 374

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +  L   YA  G+  +++ +F  M     +P     V +++A S  G+V +  L   +
Sbjct: 375 VSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQA-LCLHA 433

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
             S+ G   +      L+++ ++   +++A  V + M  +   T + S+++    HG  E
Sbjct: 434 FVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVT-WSSIIAAYGFHGQGE 492


>gi|413918395|gb|AFW58327.1| hypothetical protein ZEAMMB73_709604 [Zea mays]
          Length = 906

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 213/812 (26%), Positives = 378/812 (46%), Gaps = 88/812 (10%)

Query: 41  RKDPIFLAKSLSLSENLKSR--VLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGW 97
           R   + LA ++  S  L      L   +HG  VK G   +   +   ++  Y + G    
Sbjct: 65  RPGALELAAAIRSSSALPGSGSALARCLHGLAVKAGRVASSATVAKAVMDAYGRFGSLAD 124

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF---MPNEFAVGSVMKV 154
            L +FDEMA  + V W ++++A  + G F+    ++  M + G    MP    V  ++  
Sbjct: 125 ALLLFDEMARPDAVCWNILITACSRRGLFEDAFILFRSMLSCGVGQGMPTAVTVAVIVPA 184

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD---VAAAERVFYSISSDDV 211
           C      + G S+HC+ +K  +E +   G ++++ YAK G    +  A R F SI   DV
Sbjct: 185 CAKWRHLQTGRSVHCYVVKTGLESDTLCGNALVSMYAKCGGSRVMVDAHRAFSSIRCKDV 244

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GRQIH 269
             WN++I GY       EAL + S M+ +G   +  T  + L  CS   +F    G+++H
Sbjct: 245 VSWNSVIAGYIENQLFGEALALFSQMISQGYLPNYSTVASILPVCSFT-EFGRHHGKEVH 303

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             ++R  +E  +S+ NAL+  Y K   M     +F  M  +D++SWNT+  G+  N    
Sbjct: 304 SFVVRHGMEIDVSVSNALMTHYSKVLEMKDVESIFTSMDVRDIVSWNTIIAGYVMNGYHH 363

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   LF   + +G  P+ V+F  LL  C ++ D+  G+++         L E ++ ++L+
Sbjct: 364 RALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNALV 423

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
             +  C   + A   F ++  K+  +WN +LS               C   E  +E    
Sbjct: 424 TFYSHCDRFDDAFRAFTDILNKDSISWNAILSA--------------CATSEQHIE---- 465

Query: 450 TFFYVVETCCRSENQ--------------------QMVGQIHGAIIKTGFSSCGYICSSL 489
            FF ++   CR  NQ                    +MV + HG  ++ G++    + +++
Sbjct: 466 KFFVLMSEMCRGVNQCQWDSVTVLNVIHMSTFCGIKMVREAHGWSLRVGYTGETSVANAI 525

Query: 490 IKSYVNFG-QLDNSFEFSNGAER------------------------------LDMASWG 518
           + +YV  G   D S  F N A R                               D+ SW 
Sbjct: 526 LDAYVKCGYSHDASILFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWN 585

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            M+        + +A ++F+ L   G KPD   +  IL +C  + + Q  +  H ++++ 
Sbjct: 586 LMIQLYAQNDMDGQAFSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRA 645

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               ++++  A++DAY+KCG+I  A   F  S    D++ +  +I  YA HG+  EA+E+
Sbjct: 646 SLE-DIHLEGALVDAYSKCGNITNAYNIFQIS-PKKDLVTFTAMIGCYAMHGMAEEAVEL 703

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F KM   +++P      +++SACSH GLVD G  +FKS+   + + P+ + Y C+VD+L+
Sbjct: 704 FSKMLKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIREIHRVVPTAEHYACMVDLLA 763

Query: 699 RNGYLEDA-KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           R+G+++DA    +++ P   +   + SLL  C++HG  E+G+ A+ +L  +   +   +V
Sbjct: 764 RSGHIQDAYMFALDMPPHAVNANAWSSLLGACKVHGKVEIGQLAAGRLFSMEGGDIGNYV 823

Query: 758 LLSKRKRQREGNLLDHEGVCNVNDGIKTVDLK 789
           ++S      E      +GV NV   +K++D+K
Sbjct: 824 IMSNIYAADE----KWDGVENVRKLMKSIDMK 851



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 157/379 (41%), Gaps = 38/379 (10%)

Query: 26  HRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           HR  G  Q    + +  D +     L+    +     G +VHG+I +     +  L N L
Sbjct: 363 HRALGLFQGLLSTGIAPDSVSFISLLTACAQVGDVKTGMEVHGYIFQRPVLQETSLMNAL 422

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           +  YS C  F    R F ++  ++ +SW  I+SA   + +     K +V M       N+
Sbjct: 423 VTFYSHCDRFDDAFRAFTDILNKDSISWNAILSACATSEQHIE--KFFVLMSEMCRGVNQ 480

Query: 146 FAVGSVMKVCVSMGASEFGYSI----HCFALKIRIEKNPFVGCSVLNFYAKLGD------ 195
               SV  + V   ++  G  +    H ++L++       V  ++L+ Y K G       
Sbjct: 481 CQWDSVTVLNVIHMSTFCGIKMVREAHGWSLRVGYTGETSVANAILDAYVKCGYSHDASI 540

Query: 196 -------------------------VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                                    +  AE +F  ++  D+  WN MI  YA      +A
Sbjct: 541 LFRNHAGRNIVTDNIMISCYLKSNCIEDAEVIFNHMAEKDLTSWNLMIQLYAQNDMDGQA 600

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
            ++ + +  EG+  D  +  N L+ C  +    + RQ H  ++R+ +E  I +  AL+D 
Sbjct: 601 FSLFNHLQSEGLKPDIVSIANILEACIHLCSVQLVRQCHAYMLRASLE-DIHLEGALVDA 659

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A+ +F+    KD++++  + G ++ +    +   LF K +    RP+HV  
Sbjct: 660 YSKCGNITNAYNIFQISPKKDLVTFTAMIGCYAMHGMAEEAVELFSKMLKLDIRPDHVVL 719

Query: 351 SILLRQCGKLLDLDLGLQL 369
           + LL  C     +D G+++
Sbjct: 720 TTLLSACSHAGLVDAGIKI 738


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 164/532 (30%), Positives = 279/532 (52%), Gaps = 1/532 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EA+ V+ + L  G+  D + ++  L+ C    D    +Q+H  II+S +E +  ++N L+
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            +YI+   +  A  VF+ +  K   SWN +  G+ E+K+      LF +    G +PN  
Sbjct: 71  HVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAG 130

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T+ I+L+ C  L  L  G ++     H G   +  V ++L+ M+ +CG++  A  +FDN+
Sbjct: 131 TYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
              +I +W  ++  Y  +    +  +    + + G + N  T+  ++  C      + V 
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           ++H   +  G      + ++L++ Y   G +D++    +  +  D+ SW  M+ A    G
Sbjct: 251 RVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHG 310

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             HEA  +F  +   G KPD  +  +ILN+CA+ GA +  K IH   +  G   +V V +
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++  Y+K G I  AR+ FD+     +V+ +N +I   A HGL  +A+E+F +M    ++
Sbjct: 371 ALVHMYSKSGSIDDARVVFDR-MKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVK 429

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P + TFV+V+SACSH GLVD+G   + +M   YG++P      C+VD+L R G L +AK 
Sbjct: 430 PDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKL 489

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            I+ M   P    + +LL  CR +GN ELGE  +++ L L PKN A +VLLS
Sbjct: 490 FIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLS 541



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 234/475 (49%), Gaps = 16/475 (3%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  +   QVH  I+K     +  + NNL+ +Y +CG       VFD + +++  SW  ++
Sbjct: 42  KDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMI 101

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +  +++   +  ++++ +M   G  PN      ++K C S+ A ++G  +H       +E
Sbjct: 102 AGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLE 161

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  VG ++L  Y K G +  A R+F ++ + D+  W  MIG YA  G G EA  ++  M
Sbjct: 162 SDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQM 221

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG   +  T+++ L  C+        +++H   + + +E  + +  AL+ MY KS  +
Sbjct: 222 EQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSI 281

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A  VF+RM  +DV+SWN + G F+E+    +   LF +    G +P+ + F  +L  C
Sbjct: 282 DDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNAC 341

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
                L+   ++   AL  G   +  V ++L++M+ + G+++ A  VFD +  +N+ +WN
Sbjct: 342 ASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWN 401

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC--------RSENQQMVGQ 469
            ++SG   +    D L+ F  +   GV+ +  TF  V+  C         RS+   M  Q
Sbjct: 402 AMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMT-Q 460

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
           ++G  I+   S C  +   L ++    G+L  +  F  N A   D A+WGA++ +
Sbjct: 461 VYG--IEPDVSHCNCMVDLLGRA----GRLMEAKLFIDNMAVDPDEATWGALLGS 509



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 124/571 (21%), Positives = 261/571 (45%), Gaps = 3/571 (0%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G + + F    V+K C+          +H   +K R+E+N  V  ++L+ Y + G +  
Sbjct: 22  RGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQE 81

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  VF ++       WNAMI GY    +  +A+ +   M  EG+  +  T++  L+ C+ 
Sbjct: 82  ARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACAS 141

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           ++    G+++H  I    +E  + +  AL+ MY K   ++ A ++F+ + + D+ISW  +
Sbjct: 142 LSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
            G ++++ N  +   L  +    G +PN +T+  +L  C     L    ++   AL  G 
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGL 261

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V ++L+ M+ + G+++ A  VFD +  +++ +WN ++  +  +    +    F  
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   G + +   F  ++  C  +   + V +IH   + +G      + ++L+  Y   G 
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +D++    +  +  ++ SW AM+S L   G   +A+ +F  +   G KPD      +L++
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSA 441

Query: 559 CAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C+  G     +S +  + ++ G   +V   + ++D   + G +  A++  D      D  
Sbjct: 442 CSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEA 501

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +  L+ +   +G V E  E+  K +L     + AT+V + +  +  G  D    + ++M
Sbjct: 502 TWGALLGSCRTYGNV-ELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWV-RTM 559

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
             + G++  P      VD    +  + D+ H
Sbjct: 560 MRERGIRKEPGRSWIEVDNKIHDFLVADSSH 590



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 5/365 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH  I   G  +D+ +   L+ MY KCG      R+FD +   +++SWT+++ A  Q
Sbjct: 148 GKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQ 207

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G      ++ + M+  GF PN     S++  C S GA ++   +H  AL   +E +  V
Sbjct: 208 SGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRV 267

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++  YAK G +  A  VF  +   DV  WN MIG +A  G G EA ++   M  EG 
Sbjct: 268 GTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGC 327

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D   F++ L  C+     +  ++IH   + S +E  + +  AL+ MY KS  +D A  
Sbjct: 328 KPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARV 387

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+RM  ++V+SWN +  G +++        +F +    G +P+ VTF  +L  C     
Sbjct: 388 VFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGL 447

Query: 363 LDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
           +D G + Q LA+   +  E +V+  + ++ +  R G +  A    DN++   +  TW  L
Sbjct: 448 VDEG-RSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGAL 506

Query: 420 LSGYC 424
           L G C
Sbjct: 507 L-GSC 510



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 146/288 (50%), Gaps = 4/288 (1%)

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
           ++ +    N  + G+  +   +  V++ C + ++     Q+H  IIK+      ++ ++L
Sbjct: 10  SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y+  G+L  +    +   +   ASW AM++  V   H  +A+ +F  +   G +P+ 
Sbjct: 70  LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
                IL +CA++ A +  K +H  +   G  ++V V +A++  Y KCG I  AR  FD 
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDN 189

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             N +D+I +  +I AYA  G   EA  +  +M+    +P+  T+VS+++AC+ +G +  
Sbjct: 190 LMN-HDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248

Query: 670 GCLLFK-SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
              + + ++D+  G++        LV M +++G ++DA+ V + M  +
Sbjct: 249 VKRVHRHALDA--GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR 294


>gi|302810303|ref|XP_002986843.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
 gi|300145497|gb|EFJ12173.1| hypothetical protein SELMODRAFT_124816 [Selaginella moellendorffii]
          Length = 845

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 195/700 (27%), Positives = 341/700 (48%), Gaps = 15/700 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  IV     +D+ + N L+ M +KC       R F  M  R+++SWT +V+A  +
Sbjct: 145 GELVHRLIVDKNLESDVVIGNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYAR 204

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG        Y+ M   G +PN     +V+  C S   ++  Y      ++   E +  V
Sbjct: 205 NGHIAEAFGYYLRMLLEGVVPNNITFLAVLAACSSARDADLVYG---NVVEAEWETDTMV 261

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             + +N ++K G +  A  VF+ +   DV  WNAM+   A  G+  EAL +   M  E +
Sbjct: 262 ANASINMFSKCGCLDRAHDVFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRRMPSE-V 320

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +DK T + AL  C+     + G+ IH  + R  +E  +    AL+ MY +   +  A +
Sbjct: 321 AVDKTTLVIALSTCAAPESLEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARR 380

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           VF+ +  K+V+SWN +   +  +++    A  +F   +L G RP   T    L     + 
Sbjct: 381 VFDGILGKNVVSWNNMIAAYGRDESLHSRALEIFRLMLLDGVRPTRTT---ALNVVSAVE 437

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
              +G QL    +  G   +  + S+L+ M+ R G++  A  VF+ +  +++  WN ++ 
Sbjct: 438 CQSVGKQLHGWIVDTGLYSDSFIGSALVNMYERTGSLGDARRVFEKIIERDVFAWNAIVG 497

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFS 480
               +    + L+ F  +   G   N  TF   +     S ++   G+ +HG I ++G  
Sbjct: 498 VCVGHGQPREALEWFSRMLLEGASGNRATFLLALSAV--SPDRVSYGRKLHGLIAESGLE 555

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   + ++LI  Y     L+++    +  E   + SW ++++A V  G   EA+ +F  +
Sbjct: 556 ADNNVANALISMYARCKSLEDARNTFDRLEDKSIVSWTSVIAACVDLGSCQEAIDLFQRM 615

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                +PD     T+L +C  + A++  K +H    +LG  + V+VA+A+I  ++K G++
Sbjct: 616 ---ELEPDRVTFTTVLEACTIVSAHREGKLVHSRARELGLESNVFVATALIHMHSKFGNL 672

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             AR  F ++  +  +  +N ++  YA  G     ++ F  M+   + P   TF++V+SA
Sbjct: 673 GEARRIF-EAVEAPTLACWNAMLGGYAQTGHSQSVIDFFHAMQQRGVAPDHITFLAVVSA 731

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV+KG   F SM   YG+    + YGCL+D+L+R G LE+A   ++ MP  PS  
Sbjct: 732 CSHAGLVEKGARTFASMGPDYGVGHGLEDYGCLIDLLARAGQLEEAYDFLQGMPCGPSDV 791

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +++LL+ C+I G+   G  A+  ++   P   AA V LS
Sbjct: 792 TWKTLLAACKIQGDVRRGSAAARSVIEREPYGAAAFVELS 831



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/670 (26%), Positives = 312/670 (46%), Gaps = 24/670 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            T V+  I   G   D F   +++ M+ KC       RVF++M +R++V WT +V+A + 
Sbjct: 47  ATSVYSSIQAQGILLDGFFGASVVRMFIKCRSIHDASRVFEQMLDRSMVLWTSMVTAFVD 106

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + + D     +  M+  G +P+     S++  C S+   E    +H   +   +E +  +
Sbjct: 107 DEDVDRAWLFFFRMQLEGVLPDRVTFISILNACESLAQGEL---VHRLIVDKNLESDVVI 163

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +++   AK  D+  A R F  +   DV  W  M+  YA  G+  EA      ML EG+
Sbjct: 164 GNALMKMLAKCYDLDGAARFFQRMPRRDVISWTGMVTAYARNGHIAEAFGYYLRMLLEGV 223

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  TF+  L  CS   D D+   ++G ++ +E E    + NA I+M+ K   +D A  
Sbjct: 224 VPNNITFLAVLAACSSARDADL---VYGNVVEAEWETDTMVANASINMFSKCGCLDRAHD 280

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF RM   DV SWN +    +++    +   LF + + S    +  T  I L  C     
Sbjct: 281 VFHRMKRWDVKSWNAMVAALAQHGFSSEALELFRR-MPSEVAVDKTTLVIALSTCAAPES 339

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G  +       G   +    ++L+ M+ RCG +  A  VFD +  KN+ +WN +++ 
Sbjct: 340 LEDGKSIHSRVARLGLETDVVAGTALVTMYSRCGDLGEARRVFDGILGKNVVSWNNMIAA 399

Query: 423 YCFN-CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           Y  +    +  L+ F  +   GV     T   VV      E Q +  Q+HG I+ TG  S
Sbjct: 400 YGRDESLHSRALEIFRLMLLDGVRPTRTTALNVVSAV---ECQSVGKQLHGWIVDTGLYS 456

Query: 482 CGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             +I S+L+  Y   G L D    F    ER D+ +W A++   V  G   EA+  F  +
Sbjct: 457 DSFIGSALVNMYERTGSLGDARRVFEKIIER-DVFAWNAIVGVCVGHGQPREALEWFSRM 515

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRT--KSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +  G   +     T L + +A+   + +  + +H  + + G   +  VA+A+I  YA+C 
Sbjct: 516 LLEGASGNR---ATFLLALSAVSPDRVSYGRKLHGLIAESGLEADNNVANALISMYARCK 572

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ AR  FD+      ++ + ++I A    G   EA+++F +M+   L+P + TF +V+
Sbjct: 573 SLEDARNTFDR-LEDKSIVSWTSVIAACVDLGSCQEAIDLFQRME---LEPDRVTFTTVL 628

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            AC+      +G L+  S   + G++ +      L+ M S+ G L +A+ + E +   P+
Sbjct: 629 EACTIVSAHREGKLV-HSRARELGLESNVFVATALIHMHSKFGNLGEARRIFEAVE-APT 686

Query: 719 PTVYRSLLSG 728
              + ++L G
Sbjct: 687 LACWNAMLGG 696


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 214/796 (26%), Positives = 380/796 (47%), Gaps = 56/796 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D   LA  L     L +  LG  +H ++VK G  +       L+ MY+KCG      +
Sbjct: 34  KPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHK 93

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMG-LKMYVDMKTNG-FMPNEFAVGSVMKVCVSM 158
           +FD+    + V W +++S   ++G+ D   +K++  M ++G  MP+   + +V+ VC   
Sbjct: 94  LFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARS 153

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA-AERVFYSISSDDVGCWNAM 217
           G    G S+H + +K   E + F G ++++ YAK G VA  A  VF SI   DV  WNAM
Sbjct: 154 GNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAM 213

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD------IGRQIHGL 271
           I G A  G   EA ++ S M+   +  +  T  N L  C   A FD       GRQIH  
Sbjct: 214 IAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC---ASFDENIAHRCGRQIHSY 270

Query: 272 IIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           +++  E+   +S+ NAL+  Y+K      A  +F  M  +D++SWNT+  G++ N    +
Sbjct: 271 VLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLK 330

Query: 331 TASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSL 388
           +  +F   + L     + VT   +L  C +L +L  G Q+    L   FL E+ +  ++L
Sbjct: 331 SLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNAL 390

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           +  + +CG +E A+  F  +S K++ +WN +L  +      +  L     + +  +  + 
Sbjct: 391 VSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDS 450

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG-----------------FSSCGYI------ 485
            T   ++  C      + V +IHG  I++G                 +S CG I      
Sbjct: 451 VTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKM 510

Query: 486 ------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
                       C+SLI  YV  G   ++    +G    D+ +W  M+          +A
Sbjct: 511 FQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQA 570

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  L   G KPD   + +++  C  + +    +  H ++I+  F  ++++   ++DA
Sbjct: 571 LELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDA 629

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG I  A   F  S +  D++++  +I  YA HG+  +A+E F  M    ++P    
Sbjct: 630 YAKCGIIGYAYKIFQSSVD-KDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVI 688

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F S++SACSH G + +G  +F S++  +GM+P+ + + C+VD+L+R G++ +A   +  +
Sbjct: 689 FTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKI 748

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDH 773
           P + +  ++ +LL  C+ +   ELG   ++KL  +   +   +++LS      +      
Sbjct: 749 PIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADD----RW 804

Query: 774 EGVCNVNDGIKTVDLK 789
           +GV  V   ++  DLK
Sbjct: 805 DGVMEVRKMMRNKDLK 820



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 135/574 (23%), Positives = 261/574 (45%), Gaps = 49/574 (8%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
            F P+   + +++K C ++ AS  G  +H + +K           ++LN YAK G +   
Sbjct: 32  AFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDC 91

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYG-FEALNVVSSMLFEGITM-DKYTFINALQGCS 257
            ++F      D   WN ++ GY+  G    + + V  +M   G  M    T    L  C+
Sbjct: 92  HKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCA 151

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY-AFKVFERMADKDVISWN 316
              + + G+ +HG +I+S  E      NAL+ MY K   +   A+ VF+ +  KDV+SWN
Sbjct: 152 RSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWN 211

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL---LDLDLGLQLQCLA 373
            +  G +EN    +  SLF   +    +PN+ T + +L  C      +    G Q+    
Sbjct: 212 AMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYV 271

Query: 374 LHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           L    L  + +V ++L+  + + G  + A S+F  +  +++ +WN +++GY  N      
Sbjct: 272 LQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKS 331

Query: 433 LKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF----SSCGYICS 487
           L  F N+     + ++  T   ++  C + +N Q   Q+H  I++  F    +S G   +
Sbjct: 332 LHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAG---N 388

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  Y   G ++ ++   +   R D+ SW +++ A   + H+   +++ H +++   +P
Sbjct: 389 ALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRP 448

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF---NTEVYVASAVIDAYAKCGDIKGAR 604
           D   + TI++ CA++   ++ K IH + I+ G     T   V +A++DAY+KCG+I+ A 
Sbjct: 449 DSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYAN 508

Query: 605 MAFDQ-------------------------------SFNSNDVIVYNTLIMAYAHHGLVS 633
             F                                   +  D+  +N ++  YA +    
Sbjct: 509 KMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPE 568

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           +A+E+F K++   ++P   T +S++  C+    V
Sbjct: 569 QALELFLKLQTQGMKPDVVTIMSLIPVCTQMASV 602



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 5/159 (3%)

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVE--AGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           +W + + +L     ++EA++ FH  ++  A  KPD  +L  IL SC+A+ A    K +H 
Sbjct: 2   TWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHS 61

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV- 632
           +V+K G  +    + A+++ YAKCG +      FDQ F   D +++N ++  Y+  G   
Sbjct: 62  YVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQ-FGRCDPVIWNIVLSGYSRSGKND 120

Query: 633 SEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGLVDKG 670
           ++ M++F  M  +  + PS  T  +V+  C+  G ++ G
Sbjct: 121 ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGG 159


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 195/747 (26%), Positives = 364/747 (48%), Gaps = 11/747 (1%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV-KLGFTNDIFL 81
           + +    G+++  SD+FL      L   L  S   K   +G ++H  +       ND  L
Sbjct: 64  RTVQEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNG 140
              +I MY+ CG       VFD +  +NL  W  ++S+  +N  +D  L+ +++M  T  
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
            +P+ F    V+K C  M     G ++H   +K  + ++ FVG ++++FY   G V  A 
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE----GITMDKYTFINALQGC 256
           ++F  +   ++  WN+MI  ++  G+  E+  ++  M+ E        D  T +  L  C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           +   +  +G+ +HG  ++  ++  + + NAL+DMY K   +  A  +F+   +K+V+SWN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           T+ GGFS   +   T  +  + +  G   + + VT    +  C     L    +L C +L
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
              F+  E V ++ +  + +CG++  A  VF  +  K + +WN L+ G+  +      L 
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
               +  SG+  +  T   ++  C + ++ ++  ++HG II+       ++  S++  Y+
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 542

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           + G+L       +  E   + SW  +++  +  G    A+ +F  +V  G +     +  
Sbjct: 543 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 602

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +  +C+ + + +  +  H + +K     + ++A ++ID YAK G I  +   F+      
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN-GLKEK 661

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
               +N +IM Y  HGL  EA+++F++M+     P   TF+ V++AC+H GL+ +G    
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI-EIMPFQPSPTVYRSLLSGCRIHG 733
             M S +G++P+   Y C++DML R G L+ A  V+ E M  +    +++SLLS CRIH 
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
           N E+GE  + KL  L P+    +VLLS
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLS 808



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/572 (25%), Positives = 247/572 (43%), Gaps = 34/572 (5%)

Query: 27  RLCGNNQFCSDSFL--------------RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK 72
           R+  +N F  +SFL                D   L   L +    +   LG  VHG  VK
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320

Query: 73  LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
           L    ++ L N L+ MYSKCG       +F     +N+VSW  +V      G+      +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380

Query: 133 YVDMKTNG--FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
              M   G     +E  + + + VC           +HC++LK     N  V  + +  Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK G ++ A+RVF+ I S  V  WNA+IGG+A       +L+    M   G+  D +T  
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L  CS +    +G+++HG IIR+ +E  + +  +++ +YI    +     +F+ M DK
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
            ++SWNT+  G+ +N  P +   +F + +L G +   ++   +   C  L  L LG +  
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             AL     D+  +  SLI M+ + G++  +  VF+ +  K+  +WN ++ GY  +    
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +K F  +  +G   +  TF  V+  C  S      G IH  +         +     +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHS------GLIHEGLRYLDQMKSSFGLKPNL 734

Query: 491 KSYV-------NFGQLDNSFEF--SNGAERLDMASWGAMMSA-LVHQGHNHEAVTIFHSL 540
           K Y          GQLD +        +E  D+  W +++S+  +HQ             
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
               EKP+ Y+L  + N  A +G ++  + + 
Sbjct: 795 ELEPEKPENYVL--LSNLYAGLGKWEDVRKVR 824


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 183/611 (29%), Positives = 322/611 (52%), Gaps = 5/611 (0%)

Query: 154 VCVSMGASEF--GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           + +S+G+ +F  G ++H + +K   + + F G +VLN Y K   +  A++VF  + + + 
Sbjct: 74  IKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNT 133

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W ++I GY        A ++   M   G   +++T    LQ CS   D  +G QIH  
Sbjct: 134 ITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCF 193

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +I+S  + ++ +  +LI MY KS   D A KVF+ M  KD+   N +   +    N G+ 
Sbjct: 194 VIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKA 253

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             +F   +  G  P   TF+ ++  C   L ++ G QLQ LA   GFL E +V +++I M
Sbjct: 254 IEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITM 313

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCT 450
           +   G  + A  +F ++S KN+ +W  L+SGY  +      +  F  +  E G+  +   
Sbjct: 314 YGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTL 373

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              +++ C    N ++  QIHG ++K G +    + ++L+  Y    +L ++    +   
Sbjct: 374 LTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLS 433

Query: 511 RLDMASWGAMMSALVH-QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              +AS+ A+++  +   G   + + +F+ L  AG KPD      +L+  A   + ++ +
Sbjct: 434 NKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGR 493

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           S H + +K GF+T + VA++VI  YAKCG I+ A   F+   N  D I +N LI AYA H
Sbjct: 494 SFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFN-IMNCRDSISWNALISAYALH 552

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   +++ +F++MK     P + T ++++ AC++ GL   G  LF  M+ +YG++P  + 
Sbjct: 553 GQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEH 612

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+ D+L R GYL +A  +I+  PF  S  ++R+L++ C++HGN   G+ AS+ LL L 
Sbjct: 613 YACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLLDLS 672

Query: 750 PKNDAAHVLLS 760
           P    +++L+S
Sbjct: 673 PVEAGSYILVS 683



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 297/627 (47%), Gaps = 16/627 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG  VH ++VK G  +D F  NN++ +Y K        +VFD M  RN ++WT ++   
Sbjct: 84  LLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGY 143

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +++ +F     +  DM   G   NE     +++ C S      G  IHCF +K   ++N 
Sbjct: 144 LEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENV 203

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S++  Y K G    AE+VF S+   D+ C N MI  Y   G G +A+ V  ++L +
Sbjct: 204 FVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLND 263

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G     YTF N +  C+     + G+Q+ GL  +       S+ NA+I MY  S     A
Sbjct: 264 GFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEA 323

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLF---HKFILSGSRPNHVTFSILLRQC 357
            ++F  M++K++ISW  L  G+S +    +    F   H  +  G   +    + +L  C
Sbjct: 324 ERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDEL--GINFDSTLLTAILDCC 381

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
               +L+LGLQ+    +  G   + NV ++L+ ++ +C  ++ A  VFD++S K I ++N
Sbjct: 382 SDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFN 441

Query: 418 ELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
            +L+G+  +  D  D +  F  +  +GV+ +  TF  ++       + +     H   +K
Sbjct: 442 AILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVK 501

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           TGF +   + +S+I  Y   G ++++ +  N     D  SW A++SA    G   +++ +
Sbjct: 502 TGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFL 561

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVIDAYA 595
           F  +   G  PDE+ +  IL +C   G ++    +   +  K G    +   + + D   
Sbjct: 562 FEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLG 621

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK---LANLQPSQA 652
           + G +  A     +S      +++ TL+     HG ++     F K+    L +L P +A
Sbjct: 622 RAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLN-----FGKLASKHLLDLSPVEA 676

Query: 653 -TFVSVMSACSHKGLVDKGCLLFKSMD 678
            +++ V +  + + + D+   + K M+
Sbjct: 677 GSYILVSNMYASEKMSDEAAKVRKVMN 703



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 38/272 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +  ++ LSL  N  S   G   H + VK GF  +I + N++I+MY+KCG      
Sbjct: 469 VKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAH 528

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F+ M  R+ +SW  ++SA   +G+    L ++ +MK  GF P+EF + ++++ C   G
Sbjct: 529 QMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSG 588

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGC-SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             + G  I  F L       P  G   +L  YA + D+                      
Sbjct: 589 LWKDG--ICLFNL-----MEPKYGIKPLLEHYACMADL---------------------- 619

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG-LIIRSEV 277
                 GY  EA++++    F   T+   T +N    C L  + + G+     L+  S V
Sbjct: 620 --LGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNV---CKLHGNLNFGKLASKHLLDLSPV 674

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           E    I+  + +MY      D A KV + M D
Sbjct: 675 EAGSYIL--VSNMYASEKMSDEAAKVRKVMND 704


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 196/650 (30%), Positives = 325/650 (50%), Gaps = 35/650 (5%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAER 201
           + FA+    K   ++ +     SIH  AL+  +     P V  ++L  YA+ GD+ AA  
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-LVA 260
           +F ++ S D   +N++I           AL+ +  ML EG  +  +T ++ L  CS L  
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175

Query: 261 DFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADKDV-----I 313
           D  +GR+ H   +++           NAL+ MY +   +D A  +F  +   DV     +
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WNT+     ++   G+   + +  +  G RP+ VTF+  L  C +L  L LG ++    
Sbjct: 236 TWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYV 295

Query: 374 LHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDA 430
           L    L   + V S+L+ M+     V  A  VFD V    + +  WN ++ GY     D 
Sbjct: 296 LKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDE 355

Query: 431 DVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
           D L+ F  +  E+GV  +  T   V+ +C RSE       +HG ++K G +   ++ ++L
Sbjct: 356 DALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNAL 415

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE---- 545
           +  Y   G +D +       E  D+ SW  +++  V QGH  +A  +   + + G     
Sbjct: 416 MDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDA 475

Query: 546 --------------KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
                          P+   L T+L  CA + A  R K IH + ++   +++V V SA++
Sbjct: 476 ATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALV 535

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN-LQPS 650
           D YAKCG +  +R  FD+     +VI +N LIMAY  HGL  EA+ +FD+M  ++  +P+
Sbjct: 536 DMYAKCGCLALSRAVFDR-LPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPN 594

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + TF++ ++ACSH G+VD+G  +F+SM   +G++P+PD + C VD+L R G L++A  +I
Sbjct: 595 EVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRII 654

Query: 711 EIM-PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             M P +   + + S L  CR+H N  LGE A+E+L  L P   + +VLL
Sbjct: 655 SSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLL 704



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 200/439 (45%), Gaps = 33/439 (7%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+E+L+   LG + H   +K GF +  + F  N L++MY++ G       +F  +   ++
Sbjct: 173 LAEDLR---LGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDV 229

Query: 111 -----VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
                V+W  +VS  +Q+G     +++  DM   G  P+     S +  C  +     G 
Sbjct: 230 PGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGR 289

Query: 166 SIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD--VGCWNAMIGGYA 222
            +H + LK   +  N FV  ++++ YA    V AA  VF  + + +  +G WNAMI GYA
Sbjct: 290 EMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYA 349

Query: 223 HCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             G   +AL + + M  E G+   + T    L  C+    F     +HG +++  +  + 
Sbjct: 350 QAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNP 409

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG-------------FSENKNP 328
            + NAL+D+Y +   MD A  +F  +  +DV+SWNTL  G               E +  
Sbjct: 410 FVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQ 469

Query: 329 GQTASLFHKFILSGSR-----PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           G+      +  ++G+      PN++T   LL  C  L     G ++   A+      +  
Sbjct: 470 GRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVA 529

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V S+L+ M+ +CG + ++ +VFD +  +N+ TWN L+  Y  +    + +  F  +  S 
Sbjct: 530 VGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASD 589

Query: 444 -VEVNGCTFFYVVETCCRS 461
             + N  TF   +  C  S
Sbjct: 590 EAKPNEVTFIAALAACSHS 608



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 197/411 (47%), Gaps = 27/411 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D +  A +L     L+   LG ++H +++K      + F+ + L+ MY+     G  
Sbjct: 265 VRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAA 324

Query: 99  LRVFD--EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVC 155
             VFD     ER L  W  ++    Q G  +  L+++  M+T  G +P+E  +  V+  C
Sbjct: 325 RLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSC 384

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                     ++H + +K  +  NPFV  ++++ YA+LGD+ AA  +F +I   DV  WN
Sbjct: 385 ARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWN 444

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEG------------------ITMDKYTFINALQGCS 257
            +I G    G+  +A  +V  M  +G                  +  +  T +  L GC+
Sbjct: 445 TLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCA 504

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
           ++A    G++IHG  +R  ++  +++ +AL+DMY K   +  +  VF+R+  ++VI+WN 
Sbjct: 505 MLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNV 564

Query: 318 LFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALH 375
           L   +  +    +  +LF + + S  ++PN VTF   L  C     +D GL++ + +  +
Sbjct: 565 LIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRN 624

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYC 424
            G     ++ +  + +  R G ++ A+ +  ++    + ++ W+  L G C
Sbjct: 625 HGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSFL-GAC 674



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 149/683 (21%), Positives = 280/683 (40%), Gaps = 39/683 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLR 100
           D   L  +   +  L+S      +HG  ++    +     + N L+  Y++CG     L 
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD M  R+ V++  +++A      +   L    DM   G     F + SV+  C  +  
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175

Query: 161 S-EFGYSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG----- 212
               G   H FALK         F   ++L+ YA+LG V  A+ +F S+ + DV      
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN M+      G   EA+ V+  M+  G+  D  TF +AL  CS +    +GR++H  +
Sbjct: 236 TWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYV 295

Query: 273 IR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPG 329
           ++ +++  +  + +AL+DMY     +  A  VF+ +   ++ +  WN +  G+++     
Sbjct: 296 LKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDE 355

Query: 330 QTASLFHKF-ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
               LF +    +G  P+  T + +L  C +         +    +  G  D   V ++L
Sbjct: 356 DALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNAL 415

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG----- 443
           + ++ R G ++ A  +F  +  +++ +WN L++G        D  +    + + G     
Sbjct: 416 MDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDA 475

Query: 444 -------------VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
                        V  N  T   ++  C          +IHG  ++    S   + S+L+
Sbjct: 476 ATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALV 535

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDE 549
             Y   G L  S    +   R ++ +W  ++ A    G   EA+ +F  +V + E KP+E
Sbjct: 536 DMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNE 595

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGA-RMAF 607
                 L +C+  G   R   +   + +  G      + +  +D   + G +  A R+  
Sbjct: 596 VTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIIS 655

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGL 666
                   V  +++ + A   H  V  A+      +L  L+P +A+ +V + +  S  GL
Sbjct: 656 SMEPGEQQVSAWSSFLGACRLHRNV--ALGEIAAERLFELEPDEASHYVLLCNIYSAAGL 713

Query: 667 VDKGCLLFKSMDSQYGMQPSPDC 689
            +K   +   M  Q G+   P C
Sbjct: 714 WEKSSEVRSRM-RQRGVSKEPGC 735



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/510 (22%), Positives = 226/510 (44%), Gaps = 46/510 (9%)

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV--ECSISIVNALIDMYIKSSGMDYA 300
           T+D++    A +  + +      R IHG  +R ++    + ++ NAL+  Y +   +  A
Sbjct: 54  TLDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAA 113

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M  +D +++N+L       +            +L G      T   +L  C  L
Sbjct: 114 LALFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHL 173

Query: 361 L-DLDLGLQLQCLALHCGFL--DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN----- 412
             DL LG +    AL  GFL  DE    ++L+ M+ R G V+ A ++F +V   +     
Sbjct: 174 AEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGG 233

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + TWN ++S    +    + ++   ++   GV  +G TF   +  C + E   +  ++H 
Sbjct: 234 VVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHA 293

Query: 473 AIIKTG-FSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQG 528
            ++K    ++  ++ S+L+  Y +  ++  +   F+     ER  +  W AM+      G
Sbjct: 294 YVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGER-QLGLWNAMICGYAQAG 352

Query: 529 HNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
            + +A+ +F  +  EAG  P E  +  +L SCA    +   +++H +V+K G     +V 
Sbjct: 353 LDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQ 412

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN- 646
           +A++D YA+ GD+  AR  F  +    DV+ +NTLI      G + +A ++  +M+    
Sbjct: 413 NALMDLYARLGDMDAARWIF-ATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGR 471

Query: 647 -----------------LQPSQATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQ 684
                            + P+  T ++++  C+      +G    G  +  ++DS   + 
Sbjct: 472 FTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVG 531

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
                   LVDM ++ G L  ++ V + +P
Sbjct: 532 ------SALVDMYAKCGCLALSRAVFDRLP 555


>gi|302785117|ref|XP_002974330.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
 gi|300157928|gb|EFJ24552.1| hypothetical protein SELMODRAFT_50864 [Selaginella moellendorffii]
          Length = 720

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 193/694 (27%), Positives = 335/694 (48%), Gaps = 20/694 (2%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +LK+   G  VH  + + GF +D+ L N LI MYSKC        VFD M  R+ VSW  
Sbjct: 6   SLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDSVSWNT 65

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY----SIHCFA 171
           +++   +NG  +  ++++ +M   G  P+++ + S +  C  +   + G      IH   
Sbjct: 66  MIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGREIHRRI 125

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
             I    +  +   ++  Y K G+V  A R+F  +S      W  MI  Y   G+G EA+
Sbjct: 126 QSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGFGNEAI 185

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +   +    +  DK  F + L  CS   + + G++IH  I+  + E    + N L+D+Y
Sbjct: 186 ELYKQI---DVVPDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLLDLY 242

Query: 292 IKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHV 348
                ++ A  VF  M +  +DV+SWN++      N  P +   LF +   + G R + V
Sbjct: 243 GMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRV 302

Query: 349 TFSILLRQCGKLLDLDL--GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           ++   L  C  +    L  G  L  L L      +  V ++L+ M+ RCG V  A  VFD
Sbjct: 303 SYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFD 362

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  KN  TW  ++ GY  N    + ++ F  + + G   +   +  V+E     E+ +M
Sbjct: 363 VMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDVKM 422

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS--WGAMMSAL 524
             +IH  + + G+ S   I SSLI  +   G ++ +    +  E     S  W AM++A 
Sbjct: 423 AAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAY 482

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS--IHPFVIKLGFNT 582
             +G     + +F ++  A  +PD     T L   A  G++  +++  +   ++  G  T
Sbjct: 483 SRRGDKEAVLELFQAMQAASVRPDR---ATFLGLLAVGGSFSPSEASAVQHAILSTGMET 539

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +  V +A+++   + G +  AR  FD+  +  DV+ + ++++AYA HG   EA+++F +M
Sbjct: 540 DSLVGTALLNTLTRSGKVGEARRVFDR-LDKRDVVSWTSMMVAYASHGSSLEAIDLFQEM 598

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +L  ++P +  F++V+ AC+H G   +G   F SM   Y ++   D Y C+VD+L R G 
Sbjct: 599 QLQGMEPDEVAFLAVLFACNHAGFFRRGWDYFASMRGDYDLEAGADHYCCVVDLLGRAGR 658

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           L DA+ +I  MPF+P    + +L+  C  HG+ E
Sbjct: 659 LADAEDLIVSMPFKPDEATWSALVGACNTHGDVE 692



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/570 (22%), Positives = 266/570 (46%), Gaps = 15/570 (2%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  CVS+ A   G  +H    +     +  +G +++N Y+K    A A  VF  ++  D 
Sbjct: 1   LDACVSLKALSDGRDVHASVTRHGFGSDLVLGNALINMYSKCSSPADARNVFDGMTVRDS 60

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD----IGRQ 267
             WN MI  YA  G+G EA+ V   M   GI  DKYT I+AL GC  ++  D     GR+
Sbjct: 61  VSWNTMIATYARNGFGEEAVEVFHEMALVGIPPDKYTLISALDGCCGLSCPDRGLKKGRE 120

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IH  I        +++   LI MY K   +  A ++F+ M+ +  ++W  +   + +N  
Sbjct: 121 IHRRIQSIGFMSDVALQTGLIKMYGKFGEVIEARRLFDGMSRRVALTWARMITAYGQNGF 180

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +   L+ +  +    P+ V F+ +L  C   ++L+ G ++    +   F  +  V ++
Sbjct: 181 GNEAIELYKQIDVV---PDKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNT 237

Query: 388 LIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWES-GV 444
           L+ ++  CG +E A +VF ++    +++ +WN ++  +  N    + L  F  + E+ G 
Sbjct: 238 LLDLYGMCGCLEEAKAVFHSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGP 297

Query: 445 EVNGCTFFYVVETCCRSENQQMV--GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
             +  ++   ++ C    +  +V    +HG I+        Y+ ++L+  Y   G +  +
Sbjct: 298 RQDRVSYVSALDACSAMGSDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEA 357

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +     +  +W +M+      G   EAV +F  + + G + D+ +   ++ +   +
Sbjct: 358 KQVFDVMPSKNAVTWTSMIRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGV 417

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD-QSFNSNDVIVYNT 621
              +    IH  + +LG+ ++  + S++I  + KCG ++ AR  FD     S     +N 
Sbjct: 418 EDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNA 477

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I AY+  G     +E+F  M+ A+++P +ATF+ +++        +   +    + +  
Sbjct: 478 MIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSFSPSEASAVQHAILST-- 535

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           GM+        L++ L+R+G + +A+ V +
Sbjct: 536 GMETDSLVGTALLNTLTRSGKVGEARRVFD 565



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 193/425 (45%), Gaps = 12/425 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A  L    +  +   G ++H  IV+  F  D  + N L+ +Y  CG       VF
Sbjct: 196 DKVIFASVLDACSSAMNLEEGKRIHARIVEGKFEIDTVVNNTLLDLYGMCGCLEEAKAVF 255

Query: 103 DEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMG 159
             M E  R++VSW  I+ A + N +    L ++ +M+   G   +  +  S +  C +MG
Sbjct: 256 HSMQEQGRDVVSWNSIIRAHLHNDQPKEALGLFFEMQEACGPRQDRVSYVSALDACSAMG 315

Query: 160 ASEF--GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +     G ++H   L  RI  + +VG +++  Y + GDV  A++VF  + S +   W +M
Sbjct: 316 SDGLVHGKTLHGLILANRIHIDVYVGTALVTMYGRCGDVVEAKQVFDVMPSKNAVTWTSM 375

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY+  G+  EA+ V   M  EG   DK  ++  ++    V D  +  +IH  +  SE+
Sbjct: 376 IRGYSTNGFAREAVEVFQKMEQEGCRADKIVYVAVMEASRGVEDVKMAAKIHSRL--SEL 433

Query: 278 E-CSIS-IVNALIDMYIKSSGMDYAFKVFERMADKDVIS--WNTLFGGFSENKNPGQTAS 333
             CS S I ++LI M+ K   ++ A +VF+ M +K   S  WN +   +S   +      
Sbjct: 434 GWCSDSAIQSSLIAMHGKCGSVEAARRVFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLE 493

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF     +  RP+  TF  LL   G     +    +Q   L  G   +  V ++L+    
Sbjct: 494 LFQAMQAASVRPDRATFLGLLAVGGSFSPSEAS-AVQHAILSTGMETDSLVGTALLNTLT 552

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           R G V  A  VFD +  +++ +W  ++  Y  +    + +  F  +   G+E +   F  
Sbjct: 553 RSGKVGEARRVFDRLDKRDVVSWTSMMVAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLA 612

Query: 454 VVETC 458
           V+  C
Sbjct: 613 VLFAC 617



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 3/227 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I     +  S  ++   +  ++H  + +LG+ +D  +Q++LIAM+ KCG      R
Sbjct: 401 RADKIVYVAVMEASRGVEDVKMAAKIHSRLSELGWCSDSAIQSSLIAMHGKCGSVEAARR 460

Query: 101 VFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           VFD M E  R   +W  +++A  + G+ +  L+++  M+     P+      ++ V  S 
Sbjct: 461 VFDAMEEKSRGSPAWNAMIAAYSRRGDKEAVLELFQAMQAASVRPDRATFLGLLAVGGSF 520

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             SE     H   L   +E +  VG ++LN   + G V  A RVF  +   DV  W +M+
Sbjct: 521 SPSEASAVQHAI-LSTGMETDSLVGTALLNTLTRSGKVGEARRVFDRLDKRDVVSWTSMM 579

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
             YA  G   EA+++   M  +G+  D+  F+  L  C+    F  G
Sbjct: 580 VAYASHGSSLEAIDLFQEMQLQGMEPDEVAFLAVLFACNHAGFFRRG 626


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 191/701 (27%), Positives = 345/701 (49%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 65  GQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 124

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H +  K  +    
Sbjct: 125 CRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 184

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +   WNA++ GY   G   EA+ ++S M  E
Sbjct: 185 FVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKE 244

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   ++YA
Sbjct: 245 GIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA 304

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M +KDV++WN L  G+ +     +   +         + + VT S L+      
Sbjct: 305 EMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATST 364

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +  G   +  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 365 QNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLL 424

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S Y  +    + L+ F  +    V  N  T+  ++ +  R+      GQ++ A       
Sbjct: 425 SAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN------GQVNEA------- 471

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 472 ------------KEMFLQMQSSGIFPN------LISWTTMMNGLVQNGCSEEAILFLRKM 513

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++C  + +    +SIH ++I+   ++    + ++++D YAKCGD
Sbjct: 514 QESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGD 573

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++   ++P   T  S++S
Sbjct: 574 INKAERVFGSKLCS-ELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 632

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC++   V++   +F+ M S++GM+P  + YG +VD+L+  G  + A  ++E MP++P  
Sbjct: 633 ACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDA 692

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL   C      EL E+ S+ LL   P N   +V++S
Sbjct: 693 RMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMIS 733



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 158/641 (24%), Positives = 279/641 (43%), Gaps = 59/641 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG++ K G  + +F+ ++L  MY KCG      +VFD + +RN V+W  ++   +Q
Sbjct: 168 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 227

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG ++  +++  +M+  G  P    V + +    +MG  E G   H  A+   +E +  +
Sbjct: 228 NGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 287

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+LNFY K+G +  AE +F  +   DV  WN +I GY   G   EA+ +   M  E +
Sbjct: 288 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 347

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T    +   +   +  +G++I    IR  +E  I + +  +DMY K   +  A K
Sbjct: 348 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 407

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+    KD+I WNTL   ++++   G+   LF++  L    PN +T+++          
Sbjct: 408 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNL---------- 457

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS----YKNITTWNE 418
                                    +I    R G V  A  +F  +     + N+ +W  
Sbjct: 458 -------------------------IILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTT 492

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT- 477
           +++G   N C  + +     + ESG+  N  T    +  C    +      IHG II+  
Sbjct: 493 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQ 552

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-------DMASWGAMMSALVHQGHN 530
            +S    I +SL+  Y   G +       N AER+       ++  + AM+SA    G  
Sbjct: 553 QYSFSASIETSLVDMYAKCGDI-------NKAERVFGSKLCSELPLYNAMISAYALYGKV 605

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCA-AIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
            EA+T++ SL + G KPD   + ++L++C       Q  +     V K G    +     
Sbjct: 606 REAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGL 665

Query: 590 VIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++D  A  G+  K  R+  +  +  +  +V +        H   +E +E   K  L +  
Sbjct: 666 MVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHK--TELVEYLSKHLLESEP 723

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +   +V + +A + +G  D+   + + M  + G++  P C
Sbjct: 724 DNSGNYVMISNAYAVEGSWDEVAKMREMMKVK-GLKKKPGC 763



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 234/521 (44%), Gaps = 37/521 (7%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-------RSEVECSI 281
           EAL++V+ M +  I +    +   LQGC    D   G+QIH  I+       R+E     
Sbjct: 29  EALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEY---- 84

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFH 336
            I   L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F 
Sbjct: 85  -IETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG-----FV 138

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + + +G  P++     + + CG L     G  +       G      V SSL  M+ +CG
Sbjct: 139 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 198

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++ A  VFD +  +N   WN L+ GY  N    + ++    + + G+E    T      
Sbjct: 199 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTV----- 253

Query: 457 TCCRSENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           + C S +  M G     Q H   I  G      + +S++  Y   G ++ +    +G   
Sbjct: 254 STCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIE 313

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ +W  ++S  V QG   EA+ +   +     K D   L T++++  +    +  K I
Sbjct: 314 KDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI 373

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + I+ G  +++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL
Sbjct: 374 QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQ-KDLILWNTLLSAYADSGL 432

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   + 
Sbjct: 433 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GIFPNLISWT 491

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
            +++ L +NG  E+A   +  M     +P+       LS C
Sbjct: 492 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSAC 532



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 142/627 (22%), Positives = 266/627 (42%), Gaps = 51/627 (8%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR- 175
           VS+  +NGE    L +  +M            G +++ CV       G  IH   LK   
Sbjct: 18  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 77

Query: 176 -IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
              +N ++   ++ FYAK   +  A+ +F  +   +V  W A+IG     G G  AL   
Sbjct: 78  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 137

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  GI  D +   N  + C  +     GR +HG + ++ +   + + ++L DMY K 
Sbjct: 138 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 197

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ + D++ ++WN L  G+ +N    +   L  +    G  P  VT S  L
Sbjct: 198 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCL 257

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  ++ G Q   +A+  G   +  + +S++  +C+ G +E A  +FD +  K++ 
Sbjct: 258 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVV 317

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L+SGY       + +     +    ++ +  T   ++     ++N ++  +I    
Sbjct: 318 TWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYC 377

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ G  S   + S+ +  Y   G + N+ +  +   + D+  W  ++SA    G + EA+
Sbjct: 378 IRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEAL 437

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F+ +                          + +S+ P VI             +I + 
Sbjct: 438 RLFYEM--------------------------QLESVPPNVITWNL---------IILSL 462

Query: 595 AKCGDIKGARMAFDQSFNSN---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            + G +  A+  F Q  +S    ++I + T++     +G   EA+    KM+ + L+P+ 
Sbjct: 463 LRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNA 522

Query: 652 ATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            T    +SAC      H G    G ++    + QY    S +    LVDM ++ G +  A
Sbjct: 523 FTITVALSACVNLASLHFGRSIHGYII---RNQQYSFSASIET--SLVDMYAKCGDINKA 577

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + V         P +Y +++S   ++G
Sbjct: 578 ERVFGSKLCSELP-LYNAMISAYALYG 603



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 104/522 (19%), Positives = 204/522 (39%), Gaps = 75/522 (14%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 251 VTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDG 310

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  +  + M   M+      +   + ++M    S    + G
Sbjct: 311 MIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLG 370

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             I C+ ++  +E +  +  + ++ YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 371 KEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADS 430

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 431 GLSGEALRLFYEMQLESVPPNVITW----------------------------------- 455

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I   +++  ++ A ++F +M       ++ISW T+  G  +N    +      K   
Sbjct: 456 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQE 515

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
           SG RPN  T ++ L  C  L  L  G  +    + +  +    ++ +SL+ M+ +CG + 
Sbjct: 516 SGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDIN 575

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF +     +  +N ++S Y       + +  + ++ + GV+ +  T   ++  C 
Sbjct: 576 KAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACN 635

Query: 460 RSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
              +  Q +      + K G   C                               +  +G
Sbjct: 636 YGRDVNQAIEVFRDMVSKHGMKPC-------------------------------LEHYG 664

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            M+  L   G   +A+ +     E   KPD  ++ ++  SC+
Sbjct: 665 LMVDLLASAGETDKALRLME---EMPYKPDARMVQSLFESCS 703



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 148/352 (42%), Gaps = 76/352 (21%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q      L+ D + L+  +S + + ++  LG ++  + ++ G  +DI L +  + MY+KC
Sbjct: 340 QLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKC 399

Query: 93  GYF-------------------------------GWGLRVFDEM----AERNLVSWTLIV 117
           G                                 G  LR+F EM       N+++W LI+
Sbjct: 400 GSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLII 459

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFM----------------------------------- 142
            + ++NG+ +   +M++ M+++G                                     
Sbjct: 460 LSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLR 519

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAA 199
           PN F +   +  CV++ +  FG SIH +   IR ++  F   +  S+++ YAK GD+  A
Sbjct: 520 PNAFTITVALSACVNLASLHFGRSIHGYI--IRNQQYSFSASIETSLVDMYAKCGDINKA 577

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ERVF S    ++  +NAMI  YA  G   EA+ +  S+   G+  D  T  + L  C+  
Sbjct: 578 ERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYG 637

Query: 260 ADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            D +   ++   ++ +  ++  +     ++D+   +   D A ++ E M  K
Sbjct: 638 RDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 689


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/640 (29%), Positives = 325/640 (50%), Gaps = 17/640 (2%)

Query: 136 MKTNGFMPNEFAVG----SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC-----SV 186
           M+T    P  + +G    SV    +   ++  G  IH     + + K  F  C     ++
Sbjct: 1   MQTPPHNPQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNL 60

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  Y K G+   A+++F  +   +V  WN++I GY   G+  E +N+        + +DK
Sbjct: 61  LYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDK 120

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           +TF NAL  C    D  +GR IH LI  S +   + + N+LIDMY K   +D+A  VFE 
Sbjct: 121 FTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFES 180

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD--LD 364
             + D +SWN+L  G+    +  +   L  K +  G   N       L+ CG      ++
Sbjct: 181 ADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIE 240

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  L   A+  G   +  V ++L+  + + G +E A  +F  +   N+  +N +++G+ 
Sbjct: 241 CGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFL 300

Query: 425 FNCCDAD-----VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
                AD      +  F  +   G++ +  TF  +++ C   E  +   QIH  I K   
Sbjct: 301 QMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNL 360

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            S  +I ++L++ Y   G +++  +  +   +LD+ SW +++   V  G     +T+FH 
Sbjct: 361 QSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHE 420

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L+ +G KPDE+ +  +L++CA + A +  + IH + IK G      + ++ I  YAKCGD
Sbjct: 421 LLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGD 480

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A M F ++ N  D++ ++ +I + A HG   EA+++F+ MK + + P+  TF+ V+ 
Sbjct: 481 IDSANMTFKETKNP-DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLV 539

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLV++G   F+ M   +G+ P+     C+VD+L R G L +A+  I    F+  P
Sbjct: 540 ACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDP 599

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++RSLLS CR+H   + G+  +E+++ L P+  A++VLL
Sbjct: 600 VMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLL 639



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 220/449 (48%), Gaps = 18/449 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR D    + +LS+        LG  +H  I   G    + L N+LI MY KCG   W
Sbjct: 114 SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDW 173

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+   E + VSW  +++  ++ G  D  L++ V M  +G   N +A+GS +K C S
Sbjct: 174 ARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS 233

Query: 158 MGAS--EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +S  E G  +H  A+K+ ++ +  VG ++L+ YAK+GD+  A ++F  +   +V  +N
Sbjct: 234 NFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYN 293

Query: 216 AMIGGYAHCG-----YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           AMI G+         +  EA+ +   M   G+   ++TF + L+ CS +  F+ G+QIH 
Sbjct: 294 AMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA 353

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I +  ++    I NAL+++Y  S  ++   K F      DV+SW +L  G  +N     
Sbjct: 354 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 413

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +LFH+ + SG +P+  T SI+L  C  L  +  G Q+   A+  G  +   + +S I 
Sbjct: 414 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 473

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG ++ A+  F      +I +W+ ++S    + C  + +  F  +  SG+  N  T
Sbjct: 474 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 533

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           F  V+  C            HG +++ G 
Sbjct: 534 FLGVLVACS-----------HGGLVEEGL 551



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 146/621 (23%), Positives = 272/621 (43%), Gaps = 10/621 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D +   K +  S    S + G   H H++K  F   +FL NNL+ MY KCG      
Sbjct: 15  LPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAK 74

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD M +RN+VSW  ++S   Q G +   + ++ + + +    ++F   + + VC    
Sbjct: 75  KLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTL 134

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH       +     +  S+++ Y K G +  A  VF S    D   WN++I 
Sbjct: 135 DLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIA 194

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEV 277
           GY   G   E L ++  ML  G+ ++ Y   +AL+ C  +  +  + G+ +HG  ++  +
Sbjct: 195 GYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGL 254

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE-----NKNPGQTA 332
           +  + +  AL+D Y K   ++ A K+F+ M D +V+ +N +  GF +     ++   +  
Sbjct: 255 DLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAM 314

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            LF +    G +P+  TFS +L+ C  +   + G Q+           +E + ++L+ ++
Sbjct: 315 YLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELY 374

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
              G++E     F +    ++ +W  L+ G+  N      L  F  +  SG + +  T  
Sbjct: 375 SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTIS 434

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            ++  C      +   QIH   IKTG  +   I +S I  Y   G +D++       +  
Sbjct: 435 IMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP 494

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D+ SW  M+S+    G   EAV +F  +  +G  P+      +L +C+  G  +      
Sbjct: 495 DIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYF 554

Query: 573 PFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + K  G    V  ++ ++D   + G +  A      S    D +++ +L+ A   H  
Sbjct: 555 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKA 614

Query: 632 VSEAMEIFDKMKLANLQPSQA 652
                 + +  ++  L+P  A
Sbjct: 615 TDTGKRVAE--RVIELEPEAA 633


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/638 (28%), Positives = 328/638 (51%), Gaps = 24/638 (3%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-----GCSVLNFYAKLGDVAAAERVFY 204
           SV+++C    + + G  +  F     I  N FV     G  +   Y   GD+  A RVF 
Sbjct: 99  SVLQLCADSKSLKDGKEVDNF-----IRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFD 153

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +  +    WN ++   A  G    ++ +   M+  G+ MD YTF    +  S +   + 
Sbjct: 154 QVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNG 213

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G Q+HG I++S      S+ N+L+  Y+K+  +D A KVF+ M ++DVISWN++  G+  
Sbjct: 214 GEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N    +  S+F + + SG   +  T   +   C     + LG  + C  +   F  E+  
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF 333

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+ +CG ++ A  VF  +S +++ ++  +++GY       + +K F  + E G+
Sbjct: 334 CNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   V+  C R+       ++H  I +       ++ ++L+  Y   G +  +  
Sbjct: 394 SPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAEL 453

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIG 563
             +     D+ SW  ++       + +EA+++F+ L VE    PDE  +  +L +CA++ 
Sbjct: 454 VFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLS 513

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A+ + + IH ++++ G+ ++ +VA++++D YAKCG +  AR+ FD    S D++ +  +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDD-ITSKDLVSWTVMI 572

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y  HG   EA+ +F++M+ A ++P + +FVS++ ACSH GLVD+G   F  M  +  +
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           +P+ + Y C+VDML+R G L  A   IE MP  P  T++ +LL GCRIH + +L E  +E
Sbjct: 633 EPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAE 692

Query: 744 KLLLLLPKNDAAHVLLS------------KRKRQREGN 769
           K+  L P+N   +VL++            KR R+R G 
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQ 730



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/416 (31%), Positives = 222/416 (53%), Gaps = 4/416 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           ++KS S   +L+S   G Q+HG+I+K GF     + N+L+A Y K        +VFDEM 
Sbjct: 201 VSKSFS---SLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMT 257

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ER+++SW  I++  + NG  + GL ++V M  +G   +   + SV   C        G +
Sbjct: 258 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRA 317

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HCF +K    +      ++L+ Y+K GD+ +A+ VF  +S   V  + +MI GYA  G 
Sbjct: 318 VHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGL 377

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ +   M  EGI+ D YT    L  C+     D G+++H  I  +++   I + NA
Sbjct: 378 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNA 437

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RP 345
           L+DMY K   M  A  VF  M  KD+ISWNT+ GG+S+N    +  SLF+  ++     P
Sbjct: 438 LMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSP 497

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T + +L  C  L   D G ++    +  G+  + +V +SL+ M+ +CGA+ +A  +F
Sbjct: 498 DERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLF 557

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           D+++ K++ +W  +++GY  +    + +  F  + ++G+E +  +F  ++  C  S
Sbjct: 558 DDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHS 613



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 163/651 (25%), Positives = 292/651 (44%), Gaps = 8/651 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP  L   L L  + KS   G +V   I   GF  D  L + L  MY+ CG      RVF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D++     + W ++++   ++G+F   + ++  M ++G   + +    V K   S+ +  
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H + LK    +   VG S++ FY K   V +A +VF  ++  DV  WN++I GY 
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   + L+V   MLF GI +D  T ++   GC+      +GR +H   +++       
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             N L+DMY K   +D A  VF  M+ + V+S+ ++  G++     G+   LF +    G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+  T + +L  C +   LD G ++           +  V+++L+ M+ +CG++  A 
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF-CNIWESGVEVNGCTFFYVVETCCRS 461
            VF  +  K+I +WN ++ GY  NC   + L  F   + E     +  T   V+  C   
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
                  +IHG I++ G+ S  ++ +SL+  Y   G L  +    +     D+ SW  M+
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMI 572

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ---RTKSIHPFVIKL 578
           +     G   EA+ +F+ + +AG +PDE    ++L +C+  G      R  +I     K+
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               E Y  + ++D  A+ G++  A    +      D  ++  L+     H  V  A  +
Sbjct: 633 EPTVEHY--ACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERV 690

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +  K+  L+P    +  +M+    +    +     +    Q G++ +P C
Sbjct: 691 AE--KVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGC 739



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 203/428 (47%), Gaps = 2/428 (0%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  T  + LQ C+       G+++   I  +      ++ + L  MY     +  A +V
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRV 151

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+++  +  + WN L    +++ +   +  LF K + SG   +  TFS + +    L  +
Sbjct: 152 FDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G QL    L  GF +  +V +SL+  + +   V+ A  VFD ++ +++ +WN +++GY
Sbjct: 212 NGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGY 271

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      L  F  +  SG+E++  T   V   C  S    +   +H   +K  FS   
Sbjct: 272 VSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRED 331

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
             C++L+  Y   G LD++           + S+ +M++    +G   EAV +F  + E 
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD Y +  +LN CA        K +H ++ +     +++V++A++D YAKCG ++ A
Sbjct: 392 GISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREA 451

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACS 662
            + F +     D+I +NT+I  Y+ +   +EA+ +F+ + +     P + T   V+ AC+
Sbjct: 452 ELVFSE-MRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACA 510

Query: 663 HKGLVDKG 670
                DKG
Sbjct: 511 SLSAFDKG 518



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 154/345 (44%), Gaps = 31/345 (8%)

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADV-LKTFCNIWESG--------------VEVNG 448
           +F+  S + ++   + ++ +  +  DA+  L+ FC   ESG               +++ 
Sbjct: 38  IFNRASLRTVSDRADSITTFDRSVTDANTQLRRFC---ESGNLKNAVKLLHVSGKWDIDP 94

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            T   V++ C  S++ +   ++   I   GF     + S L   Y N G L  +    + 
Sbjct: 95  RTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQ 154

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            +      W  +M+ L   G    ++ +F  ++ +G + D Y    +  S +++ +    
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGG 214

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           + +H +++K GF     V ++++  Y K   +  AR  FD+     DVI +N++I  Y  
Sbjct: 215 EQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDE-MTERDVISWNSIINGYVS 273

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQ 684
           +GL  + + +F +M  + ++   AT VSV + C+   L+  G    C   K+  S+    
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSR---- 329

Query: 685 PSPDCY-GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
              D +   L+DM S+ G L+ AK V   M  + S   Y S+++G
Sbjct: 330 --EDRFCNTLLDMYSKCGDLDSAKVVFREMSGR-SVVSYTSMIAG 371


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 195/650 (30%), Positives = 327/650 (50%), Gaps = 35/650 (5%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK--NPFVGCSVLNFYAKLGDVAAAER 201
           + FA+    K   ++ +     SIH  AL+  +     P V  ++L  YA+ GD+ AA  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-LVA 260
           +F ++ S D   +N++I           AL+ +  ML EG  +  +T ++ L  CS L  
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 261 DFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADKD-----VI 313
           D  +GR+ H   +++           NAL+ MY +   +D A  +F  +   D     V+
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVV 237

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WNT+     ++   G+   + +  +  G RP+ +TF+  L  C +L  L LG ++    
Sbjct: 238 TWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYV 297

Query: 374 LHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYCFNCCDA 430
           L    L   + V S+L+ M+     V +A  VFD V   ++ +  WN ++ GY     D 
Sbjct: 298 LKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDE 357

Query: 431 DVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
           + L+ F  +  E+GV  +  T   V+  C RSE       +HG ++K G +   ++ ++L
Sbjct: 358 EALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNAL 417

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE---- 545
           +  Y   G ++ +       E  D+ SW  +++  V QGH H+A  +   + + G     
Sbjct: 418 MDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDA 477

Query: 546 --------------KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
                          P+   L T+L  CA + A  + K IH + ++   ++++ V SA++
Sbjct: 478 TTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALV 537

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN-LQPS 650
           D YAKCG +  +R  FD+     +VI +N LIMAY  HGL  EA+ +FD+M ++N  +P+
Sbjct: 538 DMYAKCGCLALSRAVFDR-LPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPN 596

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + TF++ ++ACSH G+VD+G  LF SM   +G+QP+PD + C VD+L R G L++A  +I
Sbjct: 597 EVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSII 656

Query: 711 EIM-PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             M P +   + + S L  CR+H N  LGE A+E+L  L P   + +VLL
Sbjct: 657 TSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLL 706



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 198/411 (48%), Gaps = 27/411 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D I  A +L     L+   LG ++H +++K      + F+ + L+ MY+     G  
Sbjct: 267 VRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVA 326

Query: 99  LRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVC 155
            RVFD +    R L  W  +V    Q G  +  L+++  M+   G +P+E  +  V+  C
Sbjct: 327 RRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPAC 386

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                     ++H + LK  +  NPFV  ++++ YA+LGD+ AA  +F +I   DV  WN
Sbjct: 387 ARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWN 446

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEG------------------ITMDKYTFINALQGCS 257
            +I G    G+  +A  +V  M  +G                  +  +  T +  L GC+
Sbjct: 447 TLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCA 506

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
           ++A    G++IHG  +R  ++  I++ +AL+DMY K   +  +  VF+R+  ++VI+WN 
Sbjct: 507 MLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNV 566

Query: 318 LFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALH 375
           L   +  +    +  +LF + ++S  ++PN VTF   L  C     +D G++L   +  +
Sbjct: 567 LIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRN 626

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYC 424
            G     ++ +  + +  R G ++ A+S+  ++    + ++ W+  L G C
Sbjct: 627 HGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFL-GAC 676



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 198/439 (45%), Gaps = 33/439 (7%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN- 109
           L+E+L+   LG + H   +K GF +  + F  N L++MY++ G       +F  +   + 
Sbjct: 175 LAEDLR---LGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDS 231

Query: 110 ----LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
               +V+W  +VS  +Q+G     +++  DM   G  P+     S +  C  +     G 
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291

Query: 166 SIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYA 222
            +H + LK   +  N FV  ++++ YA    V  A RVF  +      +G WNAM+ GYA
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 223 HCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             G   EAL + + M  E G+   + T    L  C+    F     +HG +++  +  + 
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG-------------FSENKNP 328
            + NAL+D+Y +   M+ A  +F  +  +DV+SWNTL  G               E +  
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 329 GQTASLFHKFILSGSR-----PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           G+      +  ++G+      PN+VT   LL  C  L     G ++   A+      +  
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIA 531

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWES 442
           V S+L+ M+ +CG + ++ +VFD +  +N+ TWN L+  Y  +    + +  F   +  +
Sbjct: 532 VGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSN 591

Query: 443 GVEVNGCTFFYVVETCCRS 461
             + N  TF   +  C  S
Sbjct: 592 EAKPNEVTFIAALAACSHS 610


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 191/630 (30%), Positives = 329/630 (52%), Gaps = 13/630 (2%)

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF-----YAKLGDV 196
           MP+ F + SV    +   +S+ G SIH       + K  F  C  L       Y+K G++
Sbjct: 1   MPSVFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEM 60

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A+++F  +S   V  +N +I GY   G+  +A+ + S      + +DK+++   L  C
Sbjct: 61  GNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSAC 120

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
             + DF +G+ IHGL I   +   + + N LIDMY K   +D+A  +FE   + D +SWN
Sbjct: 121 GQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWN 180

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD--LDLGLQLQCLAL 374
           +L  G++      +   L  K   +G R N  T    L+ C   L+  +  G  L    +
Sbjct: 181 SLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTV 240

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC-----CD 429
             G   +  V ++L+ M+ + G +  A  +F     +N+  +N +++G+         C 
Sbjct: 241 KQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECA 300

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            + LK F  +   G++ +  TF  +++ C   E  +   QIH  I K    S  +I S+L
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           I+ Y   G  ++  +  N   +LD+ SW  M++     G    A+ +F+ L+ +G+KPDE
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDE 420

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           +I+ T+L++CA + A +  + +H + +K G  T   V ++ I  YAK G++  A++ F++
Sbjct: 421 FIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEE 480

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             N  DV+ ++ +I + A HG   +A+ +F+ MK   + P+Q TF+ V++ACSH GLV++
Sbjct: 481 IKNP-DVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEE 539

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G   ++SM   Y M+ +     C+VD+LSR G L DAK+ I    F   P ++R+LLSGC
Sbjct: 540 GLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGC 599

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           RI+ +   G+  +EKL+ L P+  +++VLL
Sbjct: 600 RIYKDIVTGKHVAEKLIELDPQESSSYVLL 629



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/590 (22%), Positives = 272/590 (46%), Gaps = 10/590 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +   K +  S    S + G   H H++K  F   +FL NN + +YSK G  G   ++F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M+ER+++S+ +++S     G +   + ++ + +      ++F+   V+  C  +    
Sbjct: 68  DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH  A+   + +  F+   +++ Y K   +  A  +F S    D   WN++I GYA
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVECS 280
             G   E L ++  M   G+ ++ +T  +AL+ C L  +     G+ +HG  ++  ++  
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS-----LF 335
           I +  AL+DMY K+  +  A ++F    +++V+ +N +  GF + ++  +  +     LF
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLF 307

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +    G +P+  TFS +++ C  +   + G Q+           +E + S+LI ++   
Sbjct: 308 SQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLL 367

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G+ E     F++    +I +W  +++GY  N      L  F  +  SG + +      ++
Sbjct: 368 GSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTML 427

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C     ++   Q+HG  +KTG  +   + +S I  Y   G LD++       +  D+ 
Sbjct: 428 SACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVV 487

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  M+ +    GH  +A+ +F  +   G  P++     +L +C+  G  +     +   
Sbjct: 488 SWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYE-S 546

Query: 576 IKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           +K  ++ ++ V   + ++D  ++ G +  A+     S   +  +++ TL+
Sbjct: 547 MKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLL 596



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 206/449 (45%), Gaps = 22/449 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D    A  LS    +K   LG  +HG  +  G    +FL N LI MY KC       
Sbjct: 106 LKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHAR 165

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV--S 157
            +F+   E + VSW  +++   + G ++  LK+ V M   G   N F +GS +K C    
Sbjct: 166 LLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNL 225

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                +G ++H + +K  ++ +  VG ++L+ YAK G +  A ++F +  + +V  +NAM
Sbjct: 226 NNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAM 285

Query: 218 IGGY-------AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           I G+         C Y  EAL + S M  +GI    +TF + ++ C+ +  F+ G+QIH 
Sbjct: 286 IAGFIQTEDIDKECAY--EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHA 343

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I +  ++    I + LI++Y      +   K F      D++SW T+  G+++N     
Sbjct: 344 HICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFES 403

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +LF++ + SG +P+    + +L  C  +     G Q+   A+  G      V +S I 
Sbjct: 404 ALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQIS 463

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ + G ++ A   F+ +   ++ +W+ ++     +    D +  F  +   G+  N  T
Sbjct: 464 MYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQIT 523

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           F  V+  C            HG +++ G 
Sbjct: 524 FLGVLTACS-----------HGGLVEEGL 541


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 197/694 (28%), Positives = 349/694 (50%), Gaps = 12/694 (1%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F+ D  L   LI MYS CGY      VFD +  +NL  W  +VS  ++N  +D  +  ++
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198

Query: 135 DM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           ++     F P+ F    ++K C        G S+H  A+K+ +  + FVG +++  Y K 
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFIN 251
           G +  A  +F  +   ++  WN++I G++  G+  EA     S+L   +G+  D  T + 
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  CS   + D+G  IHG+ ++  +   + + NALIDMY K   +  A  +F ++ +K 
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQL 369
           V+SWN++ G +S      +T  L  K  +       N VT   LL  C +  +L     L
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +L   F  +E + ++ I  + +CG++  A  VF  ++ K++++WN ++ G+  N   
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  +  +   G+  +  +   ++  C R    Q   +IHG +++ G     ++  SL
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 490 IKSYVNFGQLDNSFEFSNGAERL---DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +  Y +  +    F      ER+   +   W AM+S        +EA+++F  ++  G +
Sbjct: 559 LSLYFHCSK---PFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLE 615

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           PDE  + +IL +C+ + A    K +H F +K     + +VA +++D YAK G +  ++  
Sbjct: 616 PDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRI 675

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F++  N  +V  +N +I  +  HG  ++A+E+F+ MK ++ QP + TF+ V+ AC H GL
Sbjct: 676 FNR-LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGL 734

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           V +G      M + Y ++P  + Y C++DML R G L +A + I  MP +P   ++ SLL
Sbjct: 735 VSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLL 794

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           S    + + E+GE  +EKLL L      +++LLS
Sbjct: 795 SSSITYVDLEMGEKFAEKLLALEANKADSYILLS 828



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 238/506 (47%), Gaps = 4/506 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VHG  VK+G   D+F+ N +IA+Y KCG+    + +FD+M E+NL+SW  ++    
Sbjct: 228 LGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287

Query: 122 QNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
           +NG +    + +  +    +G +P+   + +++ VC   G  + G  IH  A+K+ +   
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++++ Y+K G ++ A  +F  I +  V  WN+MIG Y+  G+ FE  +++  M  
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407

Query: 240 EGITMD--KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           E   M+  + T +N L  C   ++    R +HG  +R   +    I NA I  Y K   +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            +A  VF  M  K V SWN + GG ++N +P +    + +    G  P+  +   LL  C
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           G+L  L  G ++    L  G      V  SL+ ++  C       + F+ +  KN   WN
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWN 587

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +LSGY  N    + L  F  +   G+E +      ++  C +     +  ++H   +K 
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKN 647

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++  SL+  Y   G L +S    N     ++ASW  M++     G  ++AV +F
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELF 707

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIG 563
             +  + ++PD +    +L +C   G
Sbjct: 708 EDMKRSDKQPDRFTFLGVLQACCHAG 733



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 352 ILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           +LL++CG+  ++++G +L + L +   F  +  + + LI M+  CG    +  VFD +  
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           KN+  WN L+SGY  N    + + TF  +   +  + +  TF  +++ C    +  +   
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +HG  +K G     ++ +++I  Y   G LD + E  +     ++ SW +++      G 
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291

Query: 530 NHEAVTIFHSLVEAGEK--PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
             EA   F SL+E+G+   PD   + T+L  C+  G       IH   +KLG   E+ V 
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN- 646
           +A+ID Y+KCG +  A + F +   +  V+ +N++I AY+  G V E  ++  KM +   
Sbjct: 352 NALIDMYSKCGCLSEAAILF-RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 647 -LQPSQATFVSVMSAC 661
            ++ ++ T ++++ AC
Sbjct: 411 LMEVNEVTILNLLPAC 426



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 45/306 (14%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q  SD  L  D I +A  L     L +  LG +VH   +K     D F+  +L+ MY+K 
Sbjct: 608 QMLSDG-LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G+ G   R+F+ +  + + SW ++++    +G+ +  ++++ DMK +   P+ F    V+
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C   G    G                      LN+ A++  +   E        +   
Sbjct: 727 QACCHAGLVSEG----------------------LNYLAQMQTLYKLEPEL-----EHYA 759

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           C   M+G     G   EALN ++ M  E    D   + + L       D ++G +    +
Sbjct: 760 CVIDMLG---RAGRLNEALNFINEMPEEP---DAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD----KDV-ISWNTLFGGF----- 322
           +  E   + S +  L ++Y  +   D    V ++M D    KDV  SW  L G       
Sbjct: 814 LALEANKADSYI-LLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIA 872

Query: 323 SENKNP 328
            EN NP
Sbjct: 873 GENSNP 878


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 174/599 (29%), Positives = 314/599 (52%), Gaps = 7/599 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   LK+ +  + FV   +   YA+   +  A ++F       V  WNA++  Y   G 
Sbjct: 23  LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEGK 82

Query: 227 GFEALNVVSSMLFEGIT---MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
             E L++   M  + +T    D YT   AL+ CS +   ++G+ IHG + + +++  + +
Sbjct: 83  WVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGFL-KKKIDSDMFV 141

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSG 342
            +ALI++Y K   M+ A KVF      DV+ W ++  G+ +N +P    + F + + L  
Sbjct: 142 GSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQ 201

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+ VT       C +L D +LG  +       GF  +  + +S++ ++ + G++ +A 
Sbjct: 202 VSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAA 261

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           ++F  + YK+I +W+ +++ Y  N  + + L  F  + +  +E+N  T    +  C  S 
Sbjct: 262 NLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSS 321

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           N +   QIH   +  GF     + ++L+  Y+     +N+ E  N   + D+ SW  + S
Sbjct: 322 NLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFS 381

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                G  H+++ +F +++  G +PD   L  IL + + +G  Q+   +H FV K GF+ 
Sbjct: 382 GYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDN 441

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             ++ +++I+ YAKC  I  A   F +     DV+ ++++I AY  HG   EA+++  +M
Sbjct: 442 NEFIGASLIELYAKCSSIDNANKVF-KGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQM 500

Query: 643 -KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
              ++++P+  TFVS++SACSH GL+++G  +F  M ++Y + P+ + YG +VD+L R G
Sbjct: 501 SNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMG 560

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            L+ A  +I  MP Q  P V+ +LL  CRIH N ++GE A+  L LL P +   + LLS
Sbjct: 561 ELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLS 619



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/559 (25%), Positives = 269/559 (48%), Gaps = 7/559 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           + L E   S++  TQ+H   +K+G   D F+   L  +Y++        ++F+E   + +
Sbjct: 8   VKLLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM---PNEFAVGSVMKVCVSMGASEFGYSI 167
             W  ++ +    G++   L ++  M  +      P+ + V   +K C  +   E G  I
Sbjct: 68  YLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMI 127

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H F LK +I+ + FVG +++  Y+K G +  A +VF      DV  W ++I GY   G  
Sbjct: 128 HGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSP 186

Query: 228 FEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             AL   S M + E ++ D  T ++A   C+ ++DF++GR +HG + R   +  + + N+
Sbjct: 187 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 246

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++++Y K+  +  A  +F  M  KD+ISW+++   +++N       +LF++ I      N
Sbjct: 247 ILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 306

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT    LR C    +L+ G Q+  LA++ GF  +  V+++L+ M+ +C + E A  +F+
Sbjct: 307 RVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFN 366

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  K++ +W  L SGY         L  FCN+  +G   +      ++         Q 
Sbjct: 367 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQ 426

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              +H  + K+GF +  +I +SLI+ Y     +DN+ +   G    D+ +W ++++A   
Sbjct: 427 ALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGF 486

Query: 527 QGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEV 584
            G   EA+ + H +    + KP++    +IL++C+  G  +   K  H  V +      +
Sbjct: 487 HGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNI 546

Query: 585 YVASAVIDAYAKCGDIKGA 603
                ++D   + G++  A
Sbjct: 547 EHYGIMVDLLGRMGELDKA 565



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 222/443 (50%), Gaps = 5/443 (1%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSE--NLKSRVLGTQVHGHIVKLGFTNDIF 80
           K +  L   +Q  +D+   + P     S++L     L+   LG  +HG  +K    +D+F
Sbjct: 82  KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDSDMF 140

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-N 139
           + + LI +YSKCG     ++VF E  + ++V WT I++   QNG  ++ L  +  M    
Sbjct: 141 VGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLE 200

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
              P+   + S    C  +     G S+H F  +   +    +  S+LN Y K G +  A
Sbjct: 201 QVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIRIA 260

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             +F  +   D+  W++M+  YA  G    ALN+ + M+ + I +++ T I+AL+ C+  
Sbjct: 261 ANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASS 320

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           ++ + G+QIH L +    E  I++  AL+DMY+K    + A ++F RM  KDV+SW  LF
Sbjct: 321 SNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLF 380

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G++E     ++  +F   + +G+RP+ +    +L    +L  +   L L       GF 
Sbjct: 381 SGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFD 440

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           + E + +SLI ++ +C +++ A+ VF  + + ++ TW+ +++ Y F+    + LK    +
Sbjct: 441 NNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQM 500

Query: 440 W-ESGVEVNGCTFFYVVETCCRS 461
              S V+ N  TF  ++  C  +
Sbjct: 501 SNHSDVKPNDVTFVSILSACSHA 523



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 105/479 (21%), Positives = 211/479 (44%), Gaps = 18/479 (3%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+H   ++  +     +V  L  +Y + + + +A K+FE    K V  WN L   +    
Sbjct: 22  QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 327 NPGQTASLFHKF---ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
              +T SLFH+     ++  RP++ T SI L+ C  L  L+LG  +       GFL ++ 
Sbjct: 82  KWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIH------GFLKKKI 135

Query: 384 -----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                V S+LI ++ +CG +  A  VF      ++  W  +++GY  N      L  F  
Sbjct: 136 DSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSR 195

Query: 439 -IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +    V  +  T       C +  +  +   +HG + + GF +   + +S++  Y   G
Sbjct: 196 MVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTG 255

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            +  +          D+ SW +M++     G    A+ +F+ +++   + +   + + L 
Sbjct: 256 SIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALR 315

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +CA+    +  K IH   +  GF  ++ V++A++D Y KC   + A   F++     DV+
Sbjct: 316 ACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNR-MPKKDVV 374

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +  L   YA  G+  +++ +F  M     +P     V +++A S  G+V +  L   + 
Sbjct: 375 SWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA-LCLHAF 433

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            ++ G   +      L+++ ++   +++A  V + +      T + S+++    HG  E
Sbjct: 434 VTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVT-WSSIIAAYGFHGQGE 491


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  312 bits (799), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 195/747 (26%), Positives = 364/747 (48%), Gaps = 11/747 (1%)

Query: 23   KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV-KLGFTNDIFL 81
            + +    G+++  SD+FL      L   L  S   K   +G ++H  +       ND  L
Sbjct: 419  RTVQEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 477

Query: 82   QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNG 140
               +I MY+ CG       VFD +  +NL  W  ++S+  +N  +D  L+ +++M  T  
Sbjct: 478  CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 537

Query: 141  FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             +P+ F    V+K C  M     G ++H   +K  + ++ FVG ++++FY   G V  A 
Sbjct: 538  LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 597

Query: 201  RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE----GITMDKYTFINALQGC 256
            ++F  +   ++  WN+MI  ++  G+  E+  ++  M+ E        D  T +  L  C
Sbjct: 598  QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657

Query: 257  SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
            +   +  +G+ +HG  ++  ++  + + NAL+DMY K   +  A  +F+   +K+V+SWN
Sbjct: 658  AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717

Query: 317  TLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
            T+ GGFS   +   T  +  + +  G   + + VT    +  C     L    +L C +L
Sbjct: 718  TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 777

Query: 375  HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
               F+  E V ++ +  + +CG++  A  VF  +  K + +WN L+ G+  +      L 
Sbjct: 778  KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 837

Query: 435  TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
                +  SG+  +  T   ++  C + ++ ++  ++HG II+       ++  S++  Y+
Sbjct: 838  AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 897

Query: 495  NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
            + G+L       +  E   + SW  +++  +  G    A+ +F  +V  G +     +  
Sbjct: 898  HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 957

Query: 555  ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
            +  +C+ + + +  +  H + +K     + ++A ++ID YAK G I  +   F+      
Sbjct: 958  VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN-GLKEK 1016

Query: 615  DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
                +N +IM Y  HGL  EA+++F++M+     P   TF+ V++AC+H GL+ +G    
Sbjct: 1017 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 1076

Query: 675  KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI-EIMPFQPSPTVYRSLLSGCRIHG 733
              M S +G++P+   Y C++DML R G L+ A  V+ E M  +    +++SLLS CRIH 
Sbjct: 1077 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 1136

Query: 734  NKELGEWASEKLLLLLPKNDAAHVLLS 760
            N E+GE  + KL  L P+    +VLLS
Sbjct: 1137 NLEMGEKVAAKLFELEPEKPENYVLLS 1163



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 257/575 (44%), Gaps = 40/575 (6%)

Query: 27   RLCGNNQFCSDSFL--------------RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK 72
            R+  +N F  +SFL                D   L   L +    +   LG  VHG  VK
Sbjct: 616  RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 675

Query: 73   LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV----SAAIQNGEFDM 128
            L    ++ L N L+ MYSKCG       +F     +N+VSW  +V    +    +G FD+
Sbjct: 676  LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 735

Query: 129  GLKMYV---DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
              +M     D+K +     E  + + + VC           +HC++LK     N  V  +
Sbjct: 736  LRQMLAGGEDVKAD-----EVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 790

Query: 186  VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
             +  YAK G ++ A+RVF+ I S  V  WNA+IGG+A       +L+    M   G+  D
Sbjct: 791  FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 850

Query: 246  KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             +T  + L  CS +    +G+++HG IIR+ +E  + +  +++ +YI    +     +F+
Sbjct: 851  SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 910

Query: 306  RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
             M DK ++SWNT+  G+ +N  P +   +F + +L G +   ++   +   C  L  L L
Sbjct: 911  AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 970

Query: 366  GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
            G +    AL     D+  +  SLI M+ + G++  +  VF+ +  K+  +WN ++ GY  
Sbjct: 971  GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 1030

Query: 426  NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAI-IKTGFS 480
            +    + +K F  +  +G   +  TF  V+  C  S    E  + + Q+  +  +K    
Sbjct: 1031 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 1090

Query: 481  SCGYICSSLIKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSA-LVHQGHNHEAVTIF 537
               Y C  +I      GQLD +        +E  D+  W +++S+  +HQ          
Sbjct: 1091 H--YAC--VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 1146

Query: 538  HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
                   EKP+ Y+L  + N  A +G ++  + + 
Sbjct: 1147 KLFELEPEKPENYVL--LSNLYAGLGKWEDVRKVR 1179


>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
          Length = 820

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 196/764 (25%), Positives = 364/764 (47%), Gaps = 52/764 (6%)

Query: 11  ADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVL-------- 62
           A   + +FH    R+  LC N +      L  +  F  ++L +   +   +L        
Sbjct: 21  APSSTSYFH----RVSSLCKNGEIKEALSLVTEMDF--RNLRIGPEIYGEILQGCVYERD 74

Query: 63  ---GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
              G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+
Sbjct: 75  LCTGKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAII 134

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
               + G  +  L  +V+M  N   P+ F V +V K C ++  S FG  +H + LK  +E
Sbjct: 135 GVKCRMGLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLE 194

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
              FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++S M
Sbjct: 195 DCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDM 254

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             +G+   + T    L   + +A  + G Q H + I + +E    +  +L++ Y K   +
Sbjct: 255 RKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLI 314

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           +YA  +F+RM +KDV++WN L  G+ +         +     L   + + VT + L+   
Sbjct: 315 EYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAA 374

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +  +L LG ++QC         +  + S+ + M+ +CG++  A  VFD+   K++  WN
Sbjct: 375 ARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWN 434

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            LL+ Y  +    + L+ F  +    V  N  T+  ++ +  R+       ++   +  +
Sbjct: 435 TLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSS 494

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G +                                ++ SW  MM+ +V  G + EA+   
Sbjct: 495 GITP-------------------------------NLISWTTMMNGMVQNGCSEEAIHFL 523

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAK 596
             + E+G +P+ + +   L++ A + +    +SIH ++I+ L  ++   + ++++D YAK
Sbjct: 524 RKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAK 583

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGDI  A   F+    SN++ +YN +I AYA  G V+EA+ ++  ++    +P   TF S
Sbjct: 584 CGDINKAERVFESKL-SNELPLYNAMISAYALXGNVTEAVALYRSLEDMGXKPDSITFTS 642

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++SAC+H G +D+   +F  M S +G++P  + YG LVD+ +     + A  ++E MP++
Sbjct: 643 LLSACNHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAKETDKALRLMEEMPYK 702

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P   + +SL++ C      EL ++ S +LL   P+    +V +S
Sbjct: 703 PDXRMIQSLVASCNKQHKTELVDYLSRQLLETEPEXSGNYVTIS 746


>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
          Length = 734

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 196/693 (28%), Positives = 337/693 (48%), Gaps = 35/693 (5%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  ++K G  ++ + +++  L+  Y+KC        +F  +  RN+ SW  IV   
Sbjct: 70  GKQIHARVLKNGEFYSRNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVR 129

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M      P+ F V +V K C  +  S FG S+H F +K R+    
Sbjct: 130 SRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCV 189

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNAM+ GY   G   EA+ ++S M  E
Sbjct: 190 FVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEE 249

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  +L++ Y K   ++YA
Sbjct: 250 GIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYA 309

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+RM  KDV++WN L  G+ +         +     +   + + VT S L+    + 
Sbjct: 310 EMVFDRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAART 369

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            DL LG ++ C  +   F  +  + S+ + M+  CG+V  A  VFD    K++  WN LL
Sbjct: 370 RDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNALL 429

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + L+ F  +    V  N  T   ++ +   +      GQ+  A  K  FS
Sbjct: 430 AAYTESGHSGEALRLFYEMQLQSVPPNVITRNLIMRSLLGN------GQVSEA--KEMFS 481

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                            Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 482 -----------------QMQSSGIFPN------LISWTTMMNGLVQNGCSEEAILFLRKM 518

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
           +E+G +P+   +   L++CA + +     SIH ++I+    ++ V V ++++D YAKCGD
Sbjct: 519 LESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHSSSVLVDTSLVDMYAKCGD 578

Query: 600 IKGARMAFDQSFNSN-DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           I  A   F     S  ++ +Y  +I AYA +G + EA+ ++  ++   ++P   T  S++
Sbjct: 579 INKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYRNLEEIGIEPDDKTITSLL 638

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC + G   +   +F  M S++GM+P  + Y  +V++L+  G +E A  ++E MP++P 
Sbjct: 639 SACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVELLASAGEVEKALRLVEEMPYKPD 698

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
             V +SLL  C      EL E+ S+ L++  P+
Sbjct: 699 ARVIQSLLDSCNKQHKTELMEYISKHLVVFEPE 731



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 155/603 (25%), Positives = 271/603 (44%), Gaps = 53/603 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG ++K    + +F+ ++L  MY K G+     +VFDE+ ERN+V+W  ++   +Q
Sbjct: 173 GRSVHGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQ 232

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  +++  DMK  G  P    V   +    ++G  E G   H  A+   +E +  +
Sbjct: 233 NGMNEEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNIL 292

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+LNFY K+G +  AE VF  +   DV  WN +I GY   G    A+++   M  E +
Sbjct: 293 GTSLLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVENL 352

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T    +   +   D  +G+++    IR   E  I + +  +DMY +   +  A K
Sbjct: 353 KFDCVTLSTLMSVAARTRDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDAKK 412

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+    KD+I WN L   ++E+ + G+   LF++  L    PN +T ++++R       
Sbjct: 413 VFDATVQKDLILWNALLAAYTESGHSGEALRLFYEMQLQSVPPNVITRNLIMRSL----- 467

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
                      L  G + E               A EM   +  +  + N+ +W  +++G
Sbjct: 468 -----------LGNGQVSE---------------AKEMFSQMQSSGIFPNLISWTTMMNG 501

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSS 481
              N C  + +     + ESG   N  +    +  C    +  +   IHG II+    SS
Sbjct: 502 LVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHSS 561

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERL---------DMASWGAMMSALVHQGHNHE 532
              + +SL+  Y   G +       N AER+         ++  +GAM+SA    G   E
Sbjct: 562 SVLVDTSLVDMYAKCGDI-------NKAERVFGSKLYSEFELPLYGAMISAYALYGKLKE 614

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP-FVIKLGFNTEVYVASAVI 591
           AVT++ +L E G +PD+  + ++L++C   G  ++   I    V K G    +   S ++
Sbjct: 615 AVTLYRNLEEIGIEPDDKTITSLLSACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMV 674

Query: 592 DAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           +  A  G+++ A R+  +  +  +  ++ + L      H   +E ME   K  L   +P 
Sbjct: 675 ELLASAGEVEKALRLVEEMPYKPDARVIQSLLDSCNKQHK--TELMEYISK-HLVVFEPE 731

Query: 651 QAT 653
           ++T
Sbjct: 732 KST 734



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 223/490 (45%), Gaps = 24/490 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNA 286
           EAL +V+ M F  + +    F   LQGC    D   G+QIH  ++++    S +  I   
Sbjct: 34  EALRLVTEMDFRNLRIGPEIFGEILQGCVYDRDLSTGKQIHARVLKNGEFYSRNEYIETK 93

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ +  +F R+  ++V SW  + G     GFSE+   G     F + + +
Sbjct: 94  LVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVRSRIGFSEDALTG-----FVEMLET 148

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              P++     + + CG L     G  +    +     D   V SSL  M+ + G ++ A
Sbjct: 149 EISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCVFVASSLADMYGKRGFLDDA 208

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN ++ GY  N  + + ++   ++ E G+E    T      + C S
Sbjct: 209 RKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEEGIEPTRVTV-----SMCLS 263

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  + G     Q H   I  G      + +SL+  Y   G ++ +    +     D+ +
Sbjct: 264 ASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRMIGKDVVT 323

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG    A+ +   +     K D   L T+++  A     +  K +  + I
Sbjct: 324 WNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVLCYCI 383

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  F +++ +AS  +D YA+CG +  A+  FD +    D+I++N L+ AY   G   EA+
Sbjct: 384 RHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQ-KDLILWNALLAAYTESGHSGEAL 442

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L ++ P+  T   +M +    G V +   +F  M S  G+ P+   +  +++ 
Sbjct: 443 RLFYEMQLQSVPPNVITRNLIMRSLLGNGQVSEAKEMFSQMQSS-GIFPNLISWTTMMNG 501

Query: 697 LSRNGYLEDA 706
           L +NG  E+A
Sbjct: 502 LVQNGCSEEA 511



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 194/468 (41%), Gaps = 53/468 (11%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS S N+     G Q H   +  G   D  L  +L+  Y K G   +   VFD M  +++
Sbjct: 262 LSASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRMIGKDV 321

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+W L++S  +Q G  +  + M   M+      +   + ++M V       + G  + C+
Sbjct: 322 VTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVLCY 381

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            ++   E +  +  + ++ YA+ G V  A++VF +    D+  WNA++  Y   G+  EA
Sbjct: 382 CIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNALLAAYTESGHSGEA 441

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M  + +  +  T                      LI+RS               
Sbjct: 442 LRLFYEMQLQSVPPNVIT--------------------RNLIMRS--------------- 466

Query: 291 YIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
            + +  +  A ++F +M       ++ISW T+  G  +N    +      K + SG+RPN
Sbjct: 467 LLGNGQVSEAKEMFSQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMLESGARPN 526

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN------VTSSLIYMFCRCGAVEM 400
            V+ +I L  C  L  L LG      ++H   +  +       V +SL+ M+ +CG +  
Sbjct: 527 TVSIAIALSACANLASLHLG-----TSIHGYIIRNQQHSSSVLVDTSLVDMYAKCGDINK 581

Query: 401 AHSVFDNVSYK--NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A  VF +  Y    +  +  ++S Y       + +  + N+ E G+E +  T   ++  C
Sbjct: 582 AERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYRNLEEIGIEPDDKTITSLLSAC 641

Query: 459 CRS-ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
             + + +Q +    G + K G   C    S +++   + G+++ +   
Sbjct: 642 KNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVELLASAGEVEKALRL 689



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/385 (20%), Positives = 162/385 (42%), Gaps = 53/385 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + L+  +S++   +   LG +V  + ++  F +DI L +  + MY++CG      
Sbjct: 352 LKFDCVTLSTLMSVAARTRDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDAK 411

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD   +++L+ W  +++A  ++G     L+++ +M+     PN      +M+  +   
Sbjct: 412 KVFDATVQKDLILWNALLAAYTESGHSGEALRLFYEMQLQSVPPNVITRNLIMRSLLGN- 470

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD----DVGCWN 215
                                             G V+ A+ +F  + S     ++  W 
Sbjct: 471 ----------------------------------GQVSEAKEMFSQMQSSGIFPNLISWT 496

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            M+ G    G   EA+  +  ML  G   +  +   AL  C+ +A   +G  IHG IIR+
Sbjct: 497 TMMNGLVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRN 556

Query: 276 EVECSISIVN-ALIDMYIKSSGMDYAFKVF--ERMADKDVISWNTLFGGFSENKNPGQTA 332
           +   S  +V+ +L+DMY K   ++ A +VF  +  ++ ++  +  +   ++      +  
Sbjct: 557 QQHSSSVLVDTSLVDMYAKCGDINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAV 616

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT------S 386
           +L+      G  P+  T + LL  C      + G   Q + +  G + +  +       S
Sbjct: 617 TLYRNLEEIGIEPDDKTITSLLSACK-----NAGDTKQAIEIFAGMVSKHGMKPCLEHYS 671

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYK 411
            ++ +    G VE A  + + + YK
Sbjct: 672 LMVELLASAGEVEKALRLVEEMPYK 696



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 5/138 (3%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S  R + + +A +LS   NL S  LGT +HG+I++    ++ + +  +L+ MY+KCG  
Sbjct: 520 ESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHSSSVLVDTSLVDMYAKCGDI 579

Query: 96  GWGLRVFDEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
               RVF     +E  L  +  ++SA    G+    + +Y +++  G  P++  + S++ 
Sbjct: 580 NKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYRNLEEIGIEPDDKTITSLLS 639

Query: 154 VCVSMGASEFGYSIHCFA 171
            C + G ++   +I  FA
Sbjct: 640 ACKNAGDTK--QAIEIFA 655


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 194/691 (28%), Positives = 346/691 (50%), Gaps = 6/691 (0%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F+ D  L   LI MYS CGY      VFD +  +NL  W  +VS  ++N  +D  +  ++
Sbjct: 139 FSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFL 198

Query: 135 DM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           ++     F P+ F    ++K C        G S+H  A+K+ +  + FVG +++  Y K 
Sbjct: 199 ELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKC 258

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFIN 251
           G +  A  +F  +   ++  WN++I G++  G+  EA     S+L   +G+  D  T + 
Sbjct: 259 GFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVT 318

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  CS   + D+G  IHG+ ++  +   + + NALIDMY K   +  A  +F ++ +K 
Sbjct: 319 LLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKS 378

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQL 369
           V+SWN++ G +S      +T  L  K  +       N VT   LL  C +  +L     L
Sbjct: 379 VVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRAL 438

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +L   F  +E + ++ I  + +CG++  A  VF  ++ K++++WN ++ G+  N   
Sbjct: 439 HGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDP 498

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  +  +   G+  +  +   ++  C R    Q   +IHG +++ G     ++  SL
Sbjct: 499 IKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSL 558

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y +  +      +       +   W AM+S        +EA+++F  ++  G +PDE
Sbjct: 559 LSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDE 618

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             + +IL +C+ + A    K +H F +K     + +VA +++D YAK G +  ++  F++
Sbjct: 619 IAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNR 678

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             N  +V  +N +I  +  HG  ++A+E+F+ MK ++ QP + TF+ V+ AC H GLV +
Sbjct: 679 -LNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSE 737

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G      M + Y ++P  + Y C++DML R G L +A + I  MP +P   ++ SLLS  
Sbjct: 738 GLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSS 797

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             + + E+GE  +EKLL L      +++LLS
Sbjct: 798 ITYVDLEMGEKFAEKLLALEANKADSYILLS 828



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 238/506 (47%), Gaps = 4/506 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VHG  VK+G   D+F+ N +IA+Y KCG+    + +FD+M E+NL+SW  ++    
Sbjct: 228 LGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFS 287

Query: 122 QNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
           +NG +    + +  +    +G +P+   + +++ VC   G  + G  IH  A+K+ +   
Sbjct: 288 ENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHE 347

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++++ Y+K G ++ A  +F  I +  V  WN+MIG Y+  G+ FE  +++  M  
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407

Query: 240 EGITMD--KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           E   M+  + T +N L  C   ++    R +HG  +R   +    I NA I  Y K   +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            +A  VF  M  K V SWN + GG ++N +P +    + +    G  P+  +   LL  C
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           G+L  L  G ++    L  G      V  SL+ ++  C       + F+ +  KN   WN
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWN 587

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +LSGY  N    + L  F  +   G+E +      ++  C +     +  ++H   +K 
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKN 647

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++  SL+  Y   G L +S    N     ++ASW  M++     G  ++AV +F
Sbjct: 648 SLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELF 707

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIG 563
             +  + ++PD +    +L +C   G
Sbjct: 708 EDMKRSDKQPDRFTFLGVLQACCHAG 733



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 352 ILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           +LL++CG+  ++++G +L + L +   F  +  + + LI M+  CG    +  VFD +  
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           KN+  WN L+SGY  N    + + TF  +   +  + +  TF  +++ C    +  +   
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +HG  +K G     ++ +++I  Y   G LD + E  +     ++ SW +++      G 
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291

Query: 530 NHEAVTIFHSLVEAGEK--PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
             EA   F SL+E+G+   PD   + T+L  C+  G       IH   +KLG   E+ V 
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN- 646
           +A+ID Y+KCG +  A + F +   +  V+ +N++I AY+  G V E  ++  KM +   
Sbjct: 352 NALIDMYSKCGCLSEAAILF-RKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEE 410

Query: 647 -LQPSQATFVSVMSAC 661
            ++ ++ T ++++ AC
Sbjct: 411 LMEVNEVTILNLLPAC 426



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 45/306 (14%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q  SD  L  D I +A  L     L +  LG +VH   +K     D F+  +L+ MY+K 
Sbjct: 608 QMLSDG-LEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G+ G   R+F+ +  + + SW ++++    +G+ +  ++++ DMK +   P+ F    V+
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVL 726

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C   G    G                      LN+ A++  +   E        +   
Sbjct: 727 QACCHAGLVSEG----------------------LNYLAQMQTLYKLEPEL-----EHYA 759

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           C   M+G     G   EALN ++ M  E    D   + + L       D ++G +    +
Sbjct: 760 CVIDMLG---RAGRLNEALNFINEMPEEP---DAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD----KDV-ISWNTLFGGF----- 322
           +  E   + S +  L ++Y  +   D    V ++M D    KDV  SW  L G       
Sbjct: 814 LALEANKADSYI-LLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIA 872

Query: 323 SENKNP 328
            EN NP
Sbjct: 873 GENSNP 878


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  311 bits (798), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 174/597 (29%), Positives = 303/597 (50%), Gaps = 4/597 (0%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           HC+A+K     + +V   +L+ Y K G +  A  +F  +   D   WN MI GY  CG  
Sbjct: 23  HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +A  + + M   G  +D Y+F   L+G + V  FD+G Q+HGL+I+   EC++ + ++L
Sbjct: 83  EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   ++ AF+ F+ +++ + +SWN L  GF + ++      L     +  +    
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202

Query: 348 V-TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             TF+ LL      +  +L  Q+    L  G   E  + +++I  +  CG+V  A  VFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262

Query: 407 NVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            +   K++ +WN +++G+  +       + F  +    VE +  T+  ++  C   E+Q 
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNF--GQLDNSFEFSNGAERLDMASWGAMMSA 523
               +HG +IK G        ++LI  Y+ F  G ++++       +  D+ SW ++++ 
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              +G + +AV  F  L  +  K D+Y    +L SC+ +   Q  + IH    K GF + 
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN 442

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            +V S++I  Y+KCG I+ AR  F Q  + +  + +N +I+ YA HGL   ++++F +M 
Sbjct: 443 EFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC 502

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
             N++    TF ++++ACSH GL+ +G  L   M+  Y +QP  + Y   VD+L R G +
Sbjct: 503 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             AK +IE MP  P P V ++ L  CR  G  E+    +  LL + P++   +V LS
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLS 619



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 149/601 (24%), Positives = 268/601 (44%), Gaps = 36/601 (5%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            H + +K G  +DI++ N ++  Y K G+ G+   +FDEM +R+ VSW  ++S     G+
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +    ++  MK +G   + ++   ++K   S+   + G  +H   +K   E N +VG S
Sbjct: 82  LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITM 244
           +++ YAK   V  A   F  IS  +   WNA+I G+        A  ++  M  +  +TM
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  TF   L         ++ +Q+H  +++  ++  I+I NA+I  Y     +  A +VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261

Query: 305 ERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           + +   KD+ISWN++  GFS+++       LF +        +  T++ LL  C      
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCR--CGAVEMAHSVFDNVSYKNITTWNELLS 421
             G  L  + +  G     + T++LI M+ +   G +E A S+F+++  K++ +WN +++
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+       D +K F  +  S ++V+   F  ++ +C      Q+  QIH    K+GF S
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441

Query: 482 CGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             ++ SSLI  Y   G ++++ + F   + +    +W AM+      G    ++ +F  +
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM 501

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                K D      IL +C+  G  Q    +      L     VY     ++ YA   D+
Sbjct: 502 CNQNVKLDHVTFTAILTACSHTGLIQEGLEL------LNLMEPVYKIQPRMEHYAAAVDL 555

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
            G                           GLV++A E+ + M L        TF+ V  A
Sbjct: 556 LG-------------------------RAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590

Query: 661 C 661
           C
Sbjct: 591 C 591



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 5/266 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK--CGYFGWGLRVFDEMAERNLVSWTLIV 117
           ++ G  +HG ++K G        N LI+MY +   G     L +F+ +  ++L+SW  I+
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +   Q G  +  +K +  ++++    +++A  ++++ C  +   + G  IH  A K    
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 440

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSS 236
            N FV  S++  Y+K G + +A + F  ISS      WNAMI GYA  G G  +L++ S 
Sbjct: 441 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQ 500

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSS 295
           M  + + +D  TF   L  CS       G ++  L+    +++  +    A +D+  ++ 
Sbjct: 501 MCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAG 560

Query: 296 GMDYAFKVFERMA-DKDVISWNTLFG 320
            ++ A ++ E M  + D +   T  G
Sbjct: 561 LVNKAKELIESMPLNPDPMVLKTFLG 586



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 12/225 (5%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           +   S ++ D    +  L    +L +  LG Q+H    K GF ++ F+ ++LI MYSKCG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457

Query: 94  YFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                 + F +++ + + V+W  ++    Q+G   + L ++  M       +     +++
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517

Query: 153 KVCVSMGASEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
             C   G  + G  +       + ++ R+E       + ++   + G V  A+ +  S+ 
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHY----AAAVDLLGRAGLVNKAKELIESMP 573

Query: 208 -SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
            + D       +G    CG   E    V++ L E    D +T+++
Sbjct: 574 LNPDPMVLKTFLGVCRACG-EIEMATQVANHLLEIEPEDHFTYVS 617


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 180/667 (26%), Positives = 324/667 (48%), Gaps = 5/667 (0%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E N+V WT  ++   + G  D  L  ++ M   G  PN     + +  C         
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+HC  LK       FV   +++ Y+K   +  A  +F  +   D   WN+MI GY+  
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 225 GYGFEALNVVSSMLFE----GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           G   EA  +  SM+       + +  +T    L+ C  +    IG+ +HG  ++   +  
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +  + + MY K   +D A   F+++ +KD+++WNT+  G+++N    +   LF++  L
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +PN  TF  +L+    + D  +G       L  G   +  V ++L+ M+ +   +E 
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIED 300

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
               F  +S +N+ ++N L++GY       + L+ +  +   G+E +  TF  +  +C  
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S       Q+H   +K G  S   + +S++  Y   G  D++ E      R +   W  +
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGI 420

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G   +A+  F  + +  +K DE+   +++ + ++  A ++ + +H  V+K G 
Sbjct: 421 ISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGL 480

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           +  +YV SAVID Y+KCG ++ A+  F      N V+ +N++I  YA +G   EA+ +F 
Sbjct: 481 DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKN-VVSWNSMITGYAQNGFCKEALLLFQ 539

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M  + + P+  TFV ++ ACSH GLV++G   +  M   YG+ PS +   C+VD+L R 
Sbjct: 540 EMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRA 599

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           GYLE+A+  +    F   P ++ SLLS C +H N ++G  A++  L L P   +++  LS
Sbjct: 600 GYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTALS 659

Query: 761 KRKRQRE 767
                +E
Sbjct: 660 NIYASKE 666



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 272/595 (45%), Gaps = 5/595 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  + I  + ++S         L T +H  I+K GF+N +F+ + LI+MYSK        
Sbjct: 37  IEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEAR 96

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVC 155
            +FD+M ER+ VSW  +++   Q G  +    ++  M  +      + ++F + +V+K C
Sbjct: 97  FLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC 156

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +G S  G  +H +A+KI  + + FV  S +  Y K G +  A   F  I + D+  WN
Sbjct: 157 GGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWN 216

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI GYA   Y  EA+ +   M  EG   +  TF   L+  + ++D  +GR  H  +++ 
Sbjct: 217 TMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKL 276

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
                + +  AL+DMY K   ++   + F  M+ ++++S+N L  G+S      +   ++
Sbjct: 277 GCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVY 336

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +    G  P+  TF  L   C     +  G Q+   ++  G   + +V +S++  + +C
Sbjct: 337 SQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKC 396

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G  + A   F++++  N   W  ++SG+  N      L  FC + +   + +  +   V+
Sbjct: 397 GFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVI 456

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           +        +    +H  ++K+G     Y+ S++I  Y   G ++++ +  +     ++ 
Sbjct: 457 KAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVV 516

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW +M++     G   EA+ +F  +  +G  P       IL +C+  G  +  ++ +  +
Sbjct: 517 SWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLM 576

Query: 576 I-KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +   G    +   + ++D   + G ++ A      S  S +  ++ +L+ A   H
Sbjct: 577 VHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVH 631



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 221/472 (46%), Gaps = 17/472 (3%)

Query: 2   RILKRAFLFADKPS---------CHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLS 52
           RI +  FLF D P             ++ R      CG   FCS     ++   L    +
Sbjct: 91  RIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACG--LFCSMINSCENWKLLVSDFT 148

Query: 53  LSENLKS------RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+  LK+        +G  VHG+ VK+GF +D+F+  + + MY KCG        FD++ 
Sbjct: 149 LATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIE 208

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            +++V+W  +++   QN   +  ++++  M+  GF PN+     V+K   +M  S  G  
Sbjct: 209 NKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRC 268

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
            H   LK+    + FV  ++++ Y+K  D+   ER F  +S  ++  +NA+I GY+  G 
Sbjct: 269 FHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGK 328

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL V S +  EG+  D +TF+     CS+ +    G Q+H   ++  ++  +S+ N+
Sbjct: 329 YEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNS 388

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           +++ Y K    D A + FE +   + + W  +  GF++N    +    F K      + +
Sbjct: 389 IVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTD 448

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             + S +++       ++ G  L    +  G      V S++I M+ +CG VE A  VF 
Sbjct: 449 EFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFS 508

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +  KN+ +WN +++GY  N    + L  F  +  SG+     TF  ++  C
Sbjct: 509 VMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFAC 560


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 198/659 (30%), Positives = 338/659 (51%), Gaps = 23/659 (3%)

Query: 140 GFMPN--EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           GF+ N  +  V  V+K C   G S+ G  IH FA+      +  V  S++N Y K G   
Sbjct: 73  GFVGNIDQVTVAIVLKACC--GDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFD 130

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  VF ++++ D+  WN ++ G+       +ALN    M F G+  D  T    L  CS
Sbjct: 131 RALVVFENLNNPDIVSWNTVLSGFQRSD---DALNFALRMNFTGVAFDAVTCTTVLAFCS 187

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
               F  G Q+H  I++  ++C + + NALI MY +   +  A +VF+ M +KD++SWN 
Sbjct: 188 DHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNA 247

Query: 318 LFGGFSENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           +  G+++  N G  A L F + +  G + +HV+F+  +  CG   + +LG Q+  LA+  
Sbjct: 248 MLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKI 307

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G+     V + LI  + +C  +E A  VF+++  +N+ +W  ++S       + D    F
Sbjct: 308 GYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-----ISEEDATSLF 362

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   GV  N  TF  ++         +    IHG  +KT F S   + +SLI  Y  F
Sbjct: 363 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 422

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS-LVEAGEKPDEYILGTI 555
             + +S +        ++ SW +++S     G   EA+  F S L+E+  +P+E+  G++
Sbjct: 423 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES--RPNEFTFGSV 480

Query: 556 LNSCAAIGA--YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           L+S A+  A   +  +  H  ++KLG NT   V+SA++D YAK G I  +   F ++   
Sbjct: 481 LSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLK 540

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           N+V  +  +I A+A HG     M +F  M+   ++P   TF++V++AC  KG+VD G  L
Sbjct: 541 NEV-AWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQL 599

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F SM   + ++PSP+ Y  +VDML R G L++A+  +  +P     +V +SLL  CRIHG
Sbjct: 600 FNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHG 659

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
           N ++ +  ++ L+ + P    ++VL+S    ++     + E V  +  G++   ++ E+
Sbjct: 660 NVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKG----EWEKVAKIRKGMRERGVRKEI 714



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 172/624 (27%), Positives = 295/624 (47%), Gaps = 22/624 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +  GF + + + N+L+ MY K G F   L VF+ +   ++VSW  ++S   
Sbjct: 96  LGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQ 155

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++   D  L   + M   G   +     +V+  C       FG+ +H   LK  ++   F
Sbjct: 156 RS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVF 212

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFE 240
           VG +++  Y++   +  A RVF  + + D+  WNAM+ GYA  G  G EA+ V   ML E
Sbjct: 213 VGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKE 272

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +D  +F  A+  C    +F++GRQIH L ++   +  + + N LI  Y K   ++ A
Sbjct: 273 GMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDA 332

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VFE + D++V+SW T+     E+       SLF++    G  PN VTF  L+      
Sbjct: 333 KLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPNDVTFVGLIHAITMK 387

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++ G  +  + +   FL E NV++SLI M+ +  ++  +  VF+ ++Y+ I +WN L+
Sbjct: 388 NLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLI 447

Query: 421 SGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMV-GQ-IHGAIIKT 477
           SGY  N    + L+TF + + ES    N  TF  V+ +   +E   M  GQ  H  I+K 
Sbjct: 448 SGYAQNGLWQEALQTFLSALMES--RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKL 505

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G ++   + S+L+  Y   G +  S    +     +  +W A++SA    G     + +F
Sbjct: 506 GLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLF 565

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDAY 594
             +   G KPD      ++ +C   G       +   ++K   +  + E Y  S+++D  
Sbjct: 566 KDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY--SSMVDML 623

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQAT 653
            + G +K A     Q      + V  +L+ A   HG V  A  + D   L  ++P    +
Sbjct: 624 GRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVAD--DLIEMEPMGSGS 681

Query: 654 FVSVMSACSHKGLVDKGCLLFKSM 677
           +V + +  + KG  +K   + K M
Sbjct: 682 YVLMSNLYAEKGEWEKVAKIRKGM 705



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 194/403 (48%), Gaps = 9/403 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           + G Q+H  I+K G   ++F+ N LI MYS+C       RVFDEM  ++LVSW  ++S  
Sbjct: 193 IFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGY 252

Query: 121 IQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            Q G   +  + ++++M   G   +  +    +  C      E G  IH  A+KI  + +
Sbjct: 253 AQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTH 312

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V   +++ Y+K  D+  A+ VF SI   +V  W  MI          +A ++ + M  
Sbjct: 313 VKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRR 367

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G+  +  TF+  +   ++    + G+ IHG+ +++     +++ N+LI MY K   M  
Sbjct: 368 DGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSD 427

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ--C 357
           + KVFE +  +++ISWN+L  G+++N    +    F   ++  SRPN  TF  +L     
Sbjct: 428 SMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALME-SRPNEFTFGSVLSSIAS 486

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            + + +  G +     L  G      V+S+L+ M+ + G++  +  VF     KN   W 
Sbjct: 487 AEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWT 546

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
            ++S +  +     V+  F ++   GV+ +  TF  V+  C R
Sbjct: 547 AIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 589



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 8/332 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +    ++S   + K   LG Q+H   VK+G+   + + N LI+ YSKC       
Sbjct: 274 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 333

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +RN+VSWT ++S + ++        ++ +M+ +G  PN+     ++       
Sbjct: 334 LVFESIIDRNVVSWTTMISISEEDAT-----SLFNEMRRDGVYPNDVTFVGLIHAITMKN 388

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  IH   +K        V  S++  YAK   ++ + +VF  ++  ++  WN++I 
Sbjct: 389 LVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 448

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GRQIHGLIIRSEV 277
           GYA  G   EAL    S L E    +++TF + L   +      +  G++ H  I++  +
Sbjct: 449 GYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGL 507

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             +  + +AL+DMY K   +  +  VF     K+ ++W  +    + + +     +LF  
Sbjct: 508 NTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKD 567

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
               G +P+ +TF  ++  CG+   +D G QL
Sbjct: 568 MEREGVKPDSITFLAVITACGRKGMVDTGYQL 599


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 193/676 (28%), Positives = 343/676 (50%), Gaps = 22/676 (3%)

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           I NG     +     M   G  P+       +K C+   + + G  +H    +  ++ + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
               S+++ Y+K G    A  +F  + SS D+  W+AM+  +A+   GF AL     M+ 
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSG-M 297
            G   ++Y F  A + CS      +G  I G ++++  ++  + +   LIDM++K  G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDL 221

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             AFKVFE+M +++ ++W  +     +    G+   LF + ILSG  P+  T S ++  C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISAC 281

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNIT 414
             +  L LG QL   A+  G   +  V   LI M+ +C   G++  A  +FD +   N+ 
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 415 TWNELLSGYCFNC-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
           +W  +++GY      D + L  F  +  + V  N  TF   ++ C      ++  Q+   
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K GFSS   + +SLI  Y   G++D++ +  +     ++ S+  ++ A     ++ EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F+ + + G     +   ++L+  A+IG   + + IH  VIK G      V +A+I  
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISM 521

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y++CG+I+ A   F+   + N VI + ++I  +A HG  ++A+E+F KM    ++P+  T
Sbjct: 522 YSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVT 580

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +++V+SACSH GLV++G   FKSM +++G+ P  + Y C+VD+L R+G L +A   I  M
Sbjct: 581 YIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSM 640

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK------------ 761
           P++    V+R+ L  CR+HGN ELG+ A++ ++   P + AA++LLS             
Sbjct: 641 PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVS 700

Query: 762 --RKRQREGNLLDHEG 775
             RK  +E NL+   G
Sbjct: 701 NIRKAMKEKNLIKEAG 716



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 160/597 (26%), Positives = 281/597 (47%), Gaps = 10/597 (1%)

Query: 44  PIFLAKSLSLSENLKSRV--LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           P     SL L + +++R   +GT VH  + +     D    N+LI++YSKCG +     +
Sbjct: 64  PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123

Query: 102 FDEM-AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           F  M + R+L+SW+ +VS    N      L  +VDM  NG+ PNE+   +  + C +   
Sbjct: 124 FQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183

Query: 161 SEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMI 218
              G SI  F +K   ++ +  VGC +++ + K  GD+ +A +VF  +   +   W  MI
Sbjct: 184 VSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMI 243

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
                 GY  EA+++   M+  G   D++T    +  C+ +    +G+Q+H   IR  + 
Sbjct: 244 TRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLT 303

Query: 279 CSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SL 334
               +   LI+MY K S    M  A K+F+++ D +V SW  +  G+ +     + A  L
Sbjct: 304 LDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDL 363

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F   IL+   PNH TFS  L+ C  L  L +G Q+   A+  GF     V +SLI M+ R
Sbjct: 364 FRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYAR 423

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A   FD +  KN+ ++N ++  Y  N    + L+ F  I + G+  +  TF  +
Sbjct: 424 SGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASL 483

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +             QIH  +IK+G      +C++LI  Y   G ++++F+     E  ++
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHP 573
            SW ++++     G   +A+ +FH ++E G +P+      +L++C+ +G      K    
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKS 603

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
              + G    +   + ++D   + G +  A    +      D +V+ T + A   HG
Sbjct: 604 MYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHG 660



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 195/388 (50%), Gaps = 7/388 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGL 99
           D   L+  +S   N++  +LG Q+H   ++ G T D  +   LI MY+KC   G      
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           ++FD++ + N+ SWT +++  +Q G +D   L ++  M     +PN F   S +K C ++
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A   G  +   A+K+       V  S+++ YA+ G +  A + F  +   ++  +N +I
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      EAL + + +  +G+    +TF + L G + +     G QIH  +I+S ++
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLK 509

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            + S+ NALI MY +   ++ AF+VFE M D++VISW ++  GF+++    Q   LFHK 
Sbjct: 510 LNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKM 569

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +  G RPN VT+  +L  C  +  ++ G +  + +    G +      + ++ +  R G+
Sbjct: 570 LEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGS 629

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYC 424
           +  A    +++ YK +   W   L G C
Sbjct: 630 LSEAIQFINSMPYKADALVWRTFL-GAC 656


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 185/598 (30%), Positives = 309/598 (51%), Gaps = 9/598 (1%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKL--GDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           HC  +K+    + +   ++L+ Y +   G +  A  +F  +S  D   WN MI GY + G
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               A  +  SM   G+  D YTF + L+G +     D+G+Q+H LI++   E  +   +
Sbjct: 82  SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGS 141

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY K   +  AF VF+ +  ++ +SWN L  GF    +      L       G R 
Sbjct: 142 ALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRL 201

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  TFS LL    +     L +QL C  +  G   +  V ++ I  + +CG++E A  VF
Sbjct: 202 DDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVF 261

Query: 406 DN-VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           D  V  +++ TWN +L+ +  +       K F ++ + G E +  T+  ++  C   +N 
Sbjct: 262 DGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNG 321

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMS 522
           +    +HG +IK G      IC+++I  Y+  +   ++++    +  E  D  SW ++++
Sbjct: 322 K---SLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILT 378

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                GH+  A+ +F  +  A    D Y    +L SC+ +   Q  + IH   +K GF +
Sbjct: 379 GFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFES 438

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             +VAS++I  Y+KCG I+ AR +F+++   +  I +N+++ AYA HG    A+ +F +M
Sbjct: 439 NDFVASSLIFMYSKCGMIEDARKSFEKT-AKDSSITWNSIMFAYAQHGQGDVALGLFFQM 497

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +   ++    TFV+ ++ACSH GLV++G  L KSM S YG+ P  + Y C VD+  R GY
Sbjct: 498 RDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGY 557

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L++AK +IE MPF P   V+++LL  CR  G+ EL    +  LL L P+    +V+LS
Sbjct: 558 LDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILS 615



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/615 (24%), Positives = 285/615 (46%), Gaps = 13/615 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
            H   +KLG + DI+  NN+++ Y++C  G   +   +FDEM+ R+ V+W  ++S  + +
Sbjct: 21  THCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNS 80

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G      ++Y  MK+ G MP+ +  GS++K        + G  +H   +K+  E++ + G
Sbjct: 81  GSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAG 140

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++L+ YAK   V  A  VF  I   +   WNA+I G+   G    A  ++  M  EG+ 
Sbjct: 141 SALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVR 200

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  TF   L        + +  Q+H  II+  V+   ++ NA I  Y +   ++ A +V
Sbjct: 201 LDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERV 260

Query: 304 FE-RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           F+  +  +D+++WN++   F  +        LF      G  P+  T++ ++  C     
Sbjct: 261 FDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH--- 317

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG--AVEMAHSVFDNVSYKNITTWNELL 420
            D G  L  L +  G      + +++I M+      ++E A +VF ++  K+  +WN +L
Sbjct: 318 KDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSIL 377

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G+       + LK F ++  + V+++   F  V+ +C      Q+  QIH   +K+GF 
Sbjct: 378 TGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFE 437

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  ++ SSLI  Y   G ++++ +      +    +W ++M A    G    A+ +F  +
Sbjct: 438 SNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQM 497

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            +   K D       L +C+ IG  ++ +  +       G +  +   +  +D + + G 
Sbjct: 498 RDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGY 557

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVM 658
           +  A+   +      D +V+ TL+ A    G +  A ++     L  L+P +  T+V + 
Sbjct: 558 LDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQV--ASHLLELEPEEHCTYVILS 615

Query: 659 SACSH-KGLVDKGCL 672
           +   H K   +K C+
Sbjct: 616 NMYGHLKRWDEKACM 630



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/400 (28%), Positives = 191/400 (47%), Gaps = 6/400 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVH  IVK+G+   ++  + L+ MY+KC        VF  +  RN VSW  +++  +
Sbjct: 120 VGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFV 179

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+ D    +   M+  G   ++     ++ +       +    +HC  +K  ++ +  
Sbjct: 180 LEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNT 239

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  + +  Y++ G +  AERVF  ++ S D+  WN+M+  +        A  +   M   
Sbjct: 240 VCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQF 299

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS--GMD 298
           G   D YT+   +  CS     D G+ +HGL+I+  +E  + I NA+I MY++SS   M+
Sbjct: 300 GFEPDIYTYTTIISACS---HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSME 356

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  VF  M  KD +SWN++  GFS+  +      LF     +    +H  FS +LR C 
Sbjct: 357 DALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCS 416

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG Q+  L +  GF   + V SSLI+M+ +CG +E A   F+  +  +  TWN 
Sbjct: 417 DLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNS 476

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++  Y  +      L  F  + +  V+++  TF   +  C
Sbjct: 477 IMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTAC 516



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 194/398 (48%), Gaps = 9/398 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D    +  L+L +  K   L  Q+H  I+K G   D  + N  I  YS+CG      
Sbjct: 199 VRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAE 258

Query: 100 RVFD-EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           RVFD  +  R+LV+W  +++A + +   +   K+++DM+  GF P+ +   +++  C   
Sbjct: 259 RVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISAC--- 315

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFY--AKLGDVAAAERVFYSISSDDVGCWNA 216
              + G S+H   +K  +E+   +  +V+  Y  +    +  A  VF+S+ S D   WN+
Sbjct: 316 SHKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNS 375

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++ G++  G+   AL +   M F  + +D Y F   L+ CS +A   +G+QIH L ++S 
Sbjct: 376 ILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSG 435

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            E +  + ++LI MY K   ++ A K FE+ A    I+WN++   ++++        LF 
Sbjct: 436 FESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFF 495

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRC 395
           +      + +H+TF   L  C  +  ++ G   L+ +A   G        +  + +F R 
Sbjct: 496 QMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRA 555

Query: 396 GAVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDADV 432
           G ++ A ++ +++ +  +   W  LL G C  C D ++
Sbjct: 556 GYLDEAKALIESMPFDPDAMVWKTLL-GACRACGDIEL 592



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 140/313 (44%), Gaps = 19/313 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMY--SKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  +HG ++K G    + + N +IAMY  S        L VF  M  ++ VSW  I++  
Sbjct: 321 GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGF 380

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G  +  LK++V M+      + +A  +V++ C  +   + G  IH   +K   E N 
Sbjct: 381 SQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESND 440

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y+K G +  A + F   + D    WN+++  YA  G G  AL +   M  +
Sbjct: 441 FVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDK 500

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQI-------HGLIIRSE-VECSISIVNALIDMYI 292
            + MD  TF+ AL  CS +   + GR +       +G+  R E   C+       +D++ 
Sbjct: 501 KVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACA-------VDLFG 553

Query: 293 KSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
           ++  +D A  + E M  D D + W TL G      +  + A+     +L      H T+ 
Sbjct: 554 RAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDI-ELAAQVASHLLELEPEEHCTYV 612

Query: 352 ILLRQCGKLLDLD 364
           IL    G L   D
Sbjct: 613 ILSNMYGHLKRWD 625



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 4/186 (2%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L +  LG Q+H   VK GF ++ F+ ++LI MYSKCG      + F++ A+ + ++W  
Sbjct: 417 DLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNS 476

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG-YSIHCFALKI 174
           I+ A  Q+G+ D+ L ++  M+      +     + +  C  +G  E G Y +   A   
Sbjct: 477 IMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDY 536

Query: 175 RIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALN 232
            I  +     C+V + + + G +  A+ +  S+  D D   W  ++G    CG    A  
Sbjct: 537 GISPRMEHYACAV-DLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQ 595

Query: 233 VVSSML 238
           V S +L
Sbjct: 596 VASHLL 601


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 211/719 (29%), Positives = 359/719 (49%), Gaps = 26/719 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG ++HG I K  + +D+ L N L++MYS C        RVF+E+  +   SW  I+S  
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVY 219

Query: 121 IQNGEFDMGLKMYVDMKTNGF----MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            + G+     K++  M+         PNE+   S++ V  S+            A   RI
Sbjct: 220 CRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLA---RI 276

Query: 177 EKNPFV-----GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           EK+ FV     G ++++ +A+ G + +A+ +F  +   +    N ++ G A    G EA 
Sbjct: 277 EKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAA 336

Query: 232 NVVSSM--LFEGITMDKYTFINALQGCS-LVADFDIGRQIHGLIIRSE-VECSISIVNAL 287
            +   M  L E         ++A    S L      G+++H  +IR+  V+  I I NAL
Sbjct: 337 KIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNAL 396

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +++Y K + +D A  +F+ M  KD +SWN++  G   N+   +  + FH    +G  P+ 
Sbjct: 397 VNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSK 456

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +    L  C  L  + LG Q+    + CG   + +V+++L+ ++     +E    VF  
Sbjct: 457 FSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFL 516

Query: 408 VSYKNITTWNELLSGYCFNCCDADVL---KTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           +   +  +WN  +        +A VL   K F  + ++G + N  TF  ++         
Sbjct: 517 MPEYDQVSWNSFIGA--LATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLL 574

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSA 523
           ++  QIH  I+K   +    I ++L+  Y    Q+++    FS  +ER D  SW AM+S 
Sbjct: 575 ELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISG 634

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            +H G  H+A+ +   +++ G++ D++ L T+L++CA++   +R   +H   I+     E
Sbjct: 635 YIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAE 694

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V V SA++D YAKCG I  A   F+      ++  +N++I  YA HG   +A+++F +MK
Sbjct: 695 VVVGSALVDMYAKCGKIDYASRFFEL-MPVRNIYSWNSMISGYARHGHGGKALKLFTQMK 753

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
                P   TFV V+SACSH GLVD+G   FKSM   Y + P  + + C+VD+L R G +
Sbjct: 754 QHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDV 813

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  +  I+ MP  P+  ++R++L   CR +  N ELG  A++ L+ L P N   +VLLS
Sbjct: 814 KKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLS 872



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 168/698 (24%), Positives = 326/698 (46%), Gaps = 44/698 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I K G T+D+F  N L+ ++ + G      ++FDEM ++NLVSW+ +VS   QNG
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNPFV 182
             D    ++  + + G +PN +A+GS ++ C  +G +  + G  IH       I K+P+ 
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGL-----ISKSPYA 174

Query: 183 GCSVL-----NFYAKL-GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
              VL     + Y+     +  A RVF  I       WN++I  Y   G    A  + SS
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234

Query: 237 MLFEGITM----DKYTFINALQ-GCSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           M  E   +    ++YTF + +   CSLV     +  Q+   I +S     + + +AL+  
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           + +   +D A  +FE+M D++ ++ N L  G +      + A +F K +      N  ++
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF-KEMKDLVEINASSY 353

Query: 351 SILLRQCGKLLDLD----LGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVF 405
           ++LL    +  +L      G ++    +    +D    + ++L+ ++ +C A++ A S+F
Sbjct: 354 AVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIF 413

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET--CCRSEN 463
             +  K+  +WN ++SG   N    + +  F  +  +G+  +    F V+ T   C S  
Sbjct: 414 QLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSK---FSVISTLSSCASLG 470

Query: 464 QQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             M+G QIHG  IK G      + ++L+  Y     ++   +        D  SW + + 
Sbjct: 471 WIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIG 530

Query: 523 AL-VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           AL   +    +A+  F  +++AG KP+      IL++ +++   +  + IH  ++K    
Sbjct: 531 ALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVA 590

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            +  + + ++  Y KC  ++   + F +     D + +N +I  Y H+G++ +AM +   
Sbjct: 591 DDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWL 650

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDM 696
           M     +    T  +V+SAC+    +++G     C +   ++++  +  +      LVDM
Sbjct: 651 MMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSA------LVDM 704

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            ++ G ++ A    E+MP + +   + S++SG   HG+
Sbjct: 705 YAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGH 741



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 238/511 (46%), Gaps = 17/511 (3%)

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E  + +H    K  +  + F   +++N + + G++ +A+++F  +   ++  W+ ++ GY
Sbjct: 56  EDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGY 115

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVEC 279
           A  G   EA  +   ++  G+  + Y   +AL+ C  +      +G +IHGLI +S    
Sbjct: 116 AQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYAS 175

Query: 280 SISIVNALIDMYIK-SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            + + N L+ MY   S+ +D A +VFE +  K   SWN++   +    +      LF   
Sbjct: 176 DMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSM 235

Query: 339 ILSGS----RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL--HCGFLDEENVTSSLIYMF 392
               +    RPN  TF  L+     L+D  L L  Q LA      F+ +  V S+L+  F
Sbjct: 236 QREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGF 295

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            R G ++ A  +F+ +  +N  T N L+ G        +  K F  + +  VE+N  ++ 
Sbjct: 296 ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYA 354

Query: 453 YVV----ETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSN 507
            ++    E     E ++   ++H  +I+         I ++L+  Y     +DN+     
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D  SW +++S L H     EAV  FH++   G  P ++ + + L+SCA++G    
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML 474

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            + IH   IK G + +V V++A++  YA+   ++  +  F       D + +N+ I A A
Sbjct: 475 GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFL-MPEYDQVSWNSFIGALA 533

Query: 628 -HHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
                V +A++ F +M  A  +P++ TF+++
Sbjct: 534 TSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 164/322 (50%), Gaps = 4/322 (1%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           +LS   +L   +LG Q+HG  +K G   D+ + N L+ +Y++        +VF  M E +
Sbjct: 462 TLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYD 521

Query: 110 LVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            VSW   + A A         +K +++M   G+ PN     +++    S+   E G  IH
Sbjct: 522 QVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIH 581

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAHCGY 226
              LK  +  +  +  ++L FY K   +   E +F  +S   D+V  WNAMI GY H G 
Sbjct: 582 ALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVS-WNAMISGYIHNGI 640

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A+ +V  M+ +G  +D +T    L  C+ VA  + G ++H   IR+ +E  + + +A
Sbjct: 641 LHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSA 700

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY K   +DYA + FE M  +++ SWN++  G++ + + G+   LF +    G  P+
Sbjct: 701 LVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPD 760

Query: 347 HVTFSILLRQCGKLLDLDLGLQ 368
           HVTF  +L  C  +  +D G +
Sbjct: 761 HVTFVGVLSACSHVGLVDEGFE 782



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 10/186 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   LA  LS   ++ +   G +VH   ++     ++ + + L+ MY+KCG   +  R
Sbjct: 657 RLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASR 716

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F+ M  RN+ SW  ++S   ++G     LK++  MK +G +P+      V+  C  +G 
Sbjct: 717 FFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGL 776

Query: 161 SEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
            + G+         + L  RIE      C V +   + GDV   E    ++  + +   W
Sbjct: 777 VDEGFEHFKSMGEVYELAPRIEH---FSCMV-DLLGRAGDVKKLEEFIKTMPMNPNALIW 832

Query: 215 NAMIGG 220
             ++G 
Sbjct: 833 RTILGA 838


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 180/651 (27%), Positives = 331/651 (50%), Gaps = 16/651 (2%)

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGD 195
           +  G + +   +  V+K C S+     G  +HC  +K   ++     G S+++ Y K G 
Sbjct: 91  RRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGS 150

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           V     VF  +   +V  W +++ G AH     E + +   M  EGI  + +TF + L  
Sbjct: 151 VCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSA 210

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            +     D+G+++H   ++     S+ + N+L++MY K   ++ A  VF  M  +D++SW
Sbjct: 211 VASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSW 270

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           NTL  G   N+   +   LFH+   +  +    T++ +++ C  L  L L  QL    L 
Sbjct: 271 NTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLK 330

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFD-NVSYKNITTWNELLSGYCFNCCDADVLK 434
            GF    NV ++L   + +CG +  A ++F      +N+ +W  ++SG   N      + 
Sbjct: 331 HGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVV 390

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  + E  V  N  T+  ++    ++    +  QIH  +IKT +    ++ ++L+ SY 
Sbjct: 391 LFSRMREDRVMPNEFTYSAML----KASLSILPPQIHAQVIKTNYQHIPFVGTALLASYS 446

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
            FG  +++       E+ D+ +W AM+S     G    A  +F+ +   G KP+E+ + +
Sbjct: 447 KFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISS 506

Query: 555 ILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++++CA   A   + +  H   IK  ++  + V+SA++  Y++ G+I  A++ F++  + 
Sbjct: 507 VIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTD- 565

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D++ +N++I  YA HG   +A+E F +M+ + +Q    TF++V+  C+H GLV +G   
Sbjct: 566 RDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQY 625

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F SM   + + P+ + Y C+VD+ SR G L++   +I  MPF     V+R+LL  CR+H 
Sbjct: 626 FDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHK 685

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEGV 776
           N ELG+++++KLL L P + + +VLLS         ++R     L+D+  V
Sbjct: 686 NVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKV 736



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/625 (23%), Positives = 277/625 (44%), Gaps = 18/625 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRV 101
           D   L+  L    ++  RVLG Q+H   VK G    ++    +L+ MY KCG    G+ V
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F+ M ++N+V+WT +++           + ++  M+  G  PN F   SV+    S GA 
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  +H  ++K     + FV  S++N YAK G V  A+ VF  + + D+  WN ++ G 
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                  EAL +          M + T+   ++ C+ +    + RQ+H  +++     + 
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 282 SIVNALIDMYIKSSGMDYAFKVFE-RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +++ AL D Y K   +  A  +F      ++V+SW  +  G  +N +      LF +   
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               PN  T+S +L+    +L   +  Q+    +   +     V ++L+  + + G+ E 
Sbjct: 398 DRVMPNEFTYSAMLKASLSILPPQIHAQV----IKTNYQHIPFVGTALLASYSKFGSTED 453

Query: 401 AHSVFDNVSYKNITTWNELLS--GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A S+F  +  K++  W+ +LS      +C  A  L  F  +   G++ N  T   V++ C
Sbjct: 454 ALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYL--FNKMAIQGIKPNEFTISSVIDAC 511

Query: 459 -CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMAS 516
            C S       Q H   IK  +     + S+L+  Y   G +D++   F    +R D+ S
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVS 570

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFV 575
           W +M+S     G++ +A+  F  +  +G + D      ++  C   G   +  +     V
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMV 630

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
                N  +   + ++D Y++ G + +   +  D  F +   +V+ TL+ A   H  V  
Sbjct: 631 RDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAG-AMVWRTLLGACRVHKNVE- 688

Query: 635 AMEIFDKMKLANLQPSQATFVSVMS 659
            +  F   KL +L+P  ++   ++S
Sbjct: 689 -LGKFSADKLLSLEPHDSSTYVLLS 712


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/644 (29%), Positives = 328/644 (50%), Gaps = 22/644 (3%)

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
           A +N  F + L+ Y+               S++  C S  +   G  IH   L    + +
Sbjct: 54  AQKNSSFKIRLRTYI---------------SLICACSSSRSLAQGRKIHDHILNSNCKYD 98

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +   +L+ Y K G +  A  VF  +   ++  + ++I GY+  G   EA+ +   ML 
Sbjct: 99  TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQ 158

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             +  D++ F + ++ C+   D  +G+Q+H  +I+ E    +   NALI MY++ + M  
Sbjct: 159 ADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 218

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCG 358
           A KVF  +  KD+ISW+++  GFS+     +  S   + +  G   PN   F   L+ C 
Sbjct: 219 ASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 278

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            LL  D G Q+  L +            SL  M+ RCG ++ A  VF+ +   +  +WN 
Sbjct: 279 SLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNV 338

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG--QIHGAIIK 476
           +++G   N    + +  F  +  SG   +  +   ++  C +++   +    QIH  IIK
Sbjct: 339 IIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLL--CAQTKPMALCQGMQIHSFIIK 396

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            GF +   +C+SL+  Y     L   F  F +   + D  SW A+++A +      E + 
Sbjct: 397 CGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLR 456

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  ++ +  +PD   +G +L  C  I + +    +H +  K G   E ++ + +ID YA
Sbjct: 457 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYA 516

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++ AR  FD S ++ DV+ ++TLI+ YA  G   EA+ +F +MK + ++P+  TFV
Sbjct: 517 KCGSLRQARRIFD-SMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFV 575

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V++ACSH GLV++G  L+  M +++G+ P+ +   C+VD+L+R G+L +A+  I+ M  
Sbjct: 576 GVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKL 635

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           +P   V+++LLS C+  GN +L + A+E +L + P N  AHVLL
Sbjct: 636 EPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLL 679



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/624 (26%), Positives = 300/624 (48%), Gaps = 6/624 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S   G ++H HI+      D  L N++++MY KCG       VFD M ERNLVS+T ++
Sbjct: 78  RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 137

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +   QNG+    + +Y+ M     +P++FA GS++K C   G    G  +H   +K+   
Sbjct: 138 TGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESS 197

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +     +++  Y +   ++ A +VFY I + D+  W+++I G++  G+ FEAL+ +  M
Sbjct: 198 SHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEM 257

Query: 238 LFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           L  G+   ++Y F ++L+ CS +   D G QIHGL I+ E+  +     +L DMY +   
Sbjct: 258 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGF 317

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +D A +VF ++   D  SWN +  G + N    +  S+F +   SG  P+ ++   LL  
Sbjct: 318 LDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCA 377

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITT 415
             K + L  G+Q+    + CGFL + +V +SL+ M+  C  +    ++F++   K +  +
Sbjct: 378 QTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVS 437

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +L+    +    ++L+ F  +  S  E +  T   ++  C    + ++  Q+H    
Sbjct: 438 WNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSW 497

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           KTG     +I + LI  Y   G L  +    +  +  D+ SW  ++      G   EA+ 
Sbjct: 498 KTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALI 557

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVIDAY 594
           +F  +  +G +P+      +L +C+ +G  +    ++  +  + G +      S V+D  
Sbjct: 558 LFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLL 617

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQAT 653
           A+ G +  A    D+     DV+V+ TL+ A    G V  A +  +  +K+     +   
Sbjct: 618 ARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHV 677

Query: 654 FVSVMSACSHKGLVDKGCLLFKSM 677
            +  M A S  G  +   LL  SM
Sbjct: 678 LLCSMHASS--GNWEDAALLRSSM 699



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 2/180 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I +   L     + S  LG+QVH +  K G   + F++N LI MY+KCG      R+F
Sbjct: 469 DHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIF 528

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M   ++VSW+ ++    Q+G  +  L ++ +MK++G  PN      V+  C  +G  E
Sbjct: 529 DSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVE 588

Query: 163 FGYSIHCFALKIRIEKNPFVGCS-VLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
            G  ++               CS V++  A+ G +  AER    +    DV  W  ++  
Sbjct: 589 EGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSA 648


>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 195/744 (26%), Positives = 366/744 (49%), Gaps = 49/744 (6%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--A 119
             G+ +HG+ +KLG  +   L   L+ +Y+K G   +  ++F EM +R+ V W +++S  A
Sbjct: 989  FGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA 1048

Query: 120  AIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              Q+ E ++ ++++  M   N   PN   +  V+ VC  +   + G S+H + +K  +E 
Sbjct: 1049 GFQSHEAEV-MRLFRAMHMVNEAKPNSVTIAIVLPVCARL-REDAGKSVHSYVIKSGLES 1106

Query: 179  NPFVGCSVLNFYAKLGDV-AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +   G ++++ YAK G V + A   F  I   DV  WNA+I G++   +  EA  +  +M
Sbjct: 1107 HTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAM 1166

Query: 238  LFEGITMDKYTFINALQGCSLV---ADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK 293
            L   I  +  T  + L  C+ +   A +  G+++H  ++R  E+   +S++N+L+  Y++
Sbjct: 1167 LKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLR 1226

Query: 294  SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSI 352
               M+ A  +F  M  +D++SWN +  G++ N    +   LF +FI L   +P+ VT   
Sbjct: 1227 IXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVS 1286

Query: 353  LLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L  C  + +L +   +    + H G  ++ +V ++L+  + +C   + A   F  +S K
Sbjct: 1287 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRK 1346

Query: 412  NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
            ++ +WN +L  +  + C+  ++     +   G+  +  T   +++        + V + H
Sbjct: 1347 DLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETH 1406

Query: 472  GAIIKTG-----------------FSSCGYI------------------CSSLIKSYVNF 496
               I+ G                 ++ CG +                  C+S+I  YV  
Sbjct: 1407 SYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVTS 1466

Query: 497  GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
               D+++   N     D+ +W  M+          +A+++FH L   G KPD   + +IL
Sbjct: 1467 SSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSIL 1526

Query: 557  NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
             +CA + +    +  H +VI+  FN +V +  A ID Y+KCG + GA   F  S    D+
Sbjct: 1527 PACAHMASVHMLRQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAYKLFLSS-PQKDL 1584

Query: 617  IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
            +++  ++  +A HG+  EA+ IF  M    ++P      +V+ ACSH GLVD+G  +F S
Sbjct: 1585 VMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNS 1644

Query: 677  MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            ++  +G QP+ + Y C+VD+L+R G ++DA   +  MP + +  ++ +LL  CR H   E
Sbjct: 1645 IEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTRMPIEANANIWGTLLGACRTHHEVE 1704

Query: 737  LGEWASEKLLLLLPKNDAAHVLLS 760
            LG   ++ L  +   N   +V++S
Sbjct: 1705 LGRVVADHLFKIESDNIGNYVVMS 1728



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 163/659 (24%), Positives = 286/659 (43%), Gaps = 85/659 (12%)

Query: 140  GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS-----VLNFYAKLG 194
            G+ PN   + +++K CV+  A  FG  +H +ALK+       V C      +LN YAK G
Sbjct: 966  GYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKL-----GHVSCQSLCKGLLNLYAKSG 1020

Query: 195  DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM------DKYT 248
             +    ++F  +   D   WN ++ G A    GF++       LF  + M      +  T
Sbjct: 1021 ALDYCNKLFGEMDQRDPVIWNIVLSGLA----GFQSHEAEVMRLFRAMHMVNEAKPNSVT 1076

Query: 249  FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM-DYAFKVFERM 307
                L  C+ + + D G+ +H  +I+S +E      NALI MY K   +   A+  F R+
Sbjct: 1077 IAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRI 1135

Query: 308  ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD---LD 364
              KDV+SWN +  GFSENK   +   LFH  +    +PN+ T + +L  C  L +     
Sbjct: 1136 EFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYR 1195

Query: 365  LGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G ++ C  L    L E+ +V +SL+  + R   +E A  +F N+  +++ +WN +++GY
Sbjct: 1196 YGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGY 1255

Query: 424  CFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK-TGFSS 481
              N      L+ F   I    ++ +  T   V+  C    N Q+   IHG II+  G   
Sbjct: 1256 ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRE 1315

Query: 482  CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
               + ++L+  Y        + +      R D+ SW A++ A    G     V + H ++
Sbjct: 1316 DTSVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWML 1375

Query: 542  EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF---NTEVYVASAVIDAYAKCG 598
              G +PD   + TI+   AA+   ++ K  H + I+ G    +    + + ++DAYAKCG
Sbjct: 1376 REGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCG 1435

Query: 599  DIKGARMAFD-------------------------------QSFNSNDVIVYNTLIMAYA 627
            ++K A   F                                 + +  D+  +N ++  YA
Sbjct: 1436 NMKYAVNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYA 1495

Query: 628  HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH----------KGLVDKGCLLFKSM 677
             +    +A+ +F +++   ++P   T +S++ AC+H           G V + C     +
Sbjct: 1496 ENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRL 1555

Query: 678  DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            +            G  +DM S+ G +  A  +    P Q    ++ +++ G  +HG  E
Sbjct: 1556 N------------GAFIDMYSKCGSVFGAYKLFLSSP-QKDLVMFTAMVGGFAMHGMGE 1601



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 1/128 (0%)

Query: 40   LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            ++ D + +   L    ++ S  +  Q HG++++  F ND+ L    I MYSKCG      
Sbjct: 1515 MKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAY 1573

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            ++F    +++LV +T +V     +G  +  L+++  M   G  P+   + +V+  C   G
Sbjct: 1574 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 1633

Query: 160  ASEFGYSI 167
              + G+ I
Sbjct: 1634 LVDEGWKI 1641


>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
          Length = 830

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/701 (26%), Positives = 343/701 (48%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 89  GKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 148

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  N   P+ F V +V K C ++  S FG  +H + +K  +E   
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCV 208

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++S M  +
Sbjct: 209 FVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKD 268

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   + T    L   + +     G+Q H + I + +E    +  +L++ Y K   ++YA
Sbjct: 269 GVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYA 328

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+RM DKDV++WN L  G+ +         +     L   + + VT S L+    + 
Sbjct: 329 EMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAART 388

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L  G ++QC  +      +  + S  + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 389 KNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  +    + L+ F  +    V  N  T+  ++ +  R+       ++   +  +G S
Sbjct: 449 AAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGIS 508

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                                           ++ SW  MM+ +V  G + EA+     +
Sbjct: 509 P-------------------------------NLISWTTMMNGMVQNGCSEEAILFLRKM 537

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            ++G +P+ + +   L++ A + +    +SIH ++++ L  ++ V + ++++D YAKCGD
Sbjct: 538 QDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGD 597

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++    +P   TF S++S
Sbjct: 598 INKAERVFGSKLYS-ELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLS 656

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+H G +++   +F  M S++G++P  + YG +VD+L+  G  + A  +IE MP++P  
Sbjct: 657 ACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMPYKPDA 716

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL++ C      EL E+ S  LL   P+N   +V +S
Sbjct: 717 RMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVTIS 757



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 228/490 (46%), Gaps = 24/490 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNA 286
           EAL++V+ M F  + +    +   LQGC    D   G+QIH  I+++      +  I   
Sbjct: 53  EALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYAGNEYIETK 112

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G    L ++    
Sbjct: 113 LVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIF-- 170

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              P++     + + CG L     G  +    +  G  D   V SSL  M+ +CG ++ A
Sbjct: 171 ---PDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDA 227

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VFD +  +N+  WN LL GY  N  + + ++   ++ + GVE +  T      + C S
Sbjct: 228 RKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTV-----STCLS 282

Query: 462 ENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            +  M G     Q H   I  G      + +SL+  Y   G ++ +    +     D+ +
Sbjct: 283 ASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVT 342

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  ++S  V QG   +A+ +   +     K D   L T++++ A     +  K +  + I
Sbjct: 343 WNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCI 402

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +    +++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL  EA+
Sbjct: 403 RHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTV-EKDLILWNTLLAAYAESGLSGEAL 461

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   +  +++ 
Sbjct: 462 RLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNG 520

Query: 697 LSRNGYLEDA 706
           + +NG  E+A
Sbjct: 521 MVQNGCSEEA 530



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 136/623 (21%), Positives = 260/623 (41%), Gaps = 41/623 (6%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR- 175
           VS+  +NGE    L +   M            G +++ CV       G  IH   LK   
Sbjct: 42  VSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 101

Query: 176 -IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               N ++   ++ FYAK   +  A+ +F  +   +V  W A+IG     G    AL   
Sbjct: 102 FYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML   I  D +   N  + C  +     GR +HG ++++ +E  + + ++L DMY K 
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKC 221

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ + +++V++WN L  G+ +N    +   L       G  P+ VT S  L
Sbjct: 222 GVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCL 281

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  +  G Q   +A+  G   +  + +SL+  +C+ G +E A  +FD +  K++ 
Sbjct: 282 SASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVV 341

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L+SGY       D +     +    ++ +  T   ++    R++N +   ++    
Sbjct: 342 TWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYC 401

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+    S   + S  +  Y   G + ++ +  +     D+  W  +++A    G + EA+
Sbjct: 402 IRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F+ +                          + +S+ P VI             +I + 
Sbjct: 462 RLFYEM--------------------------QLESVPPNVITWNL---------IILSL 486

Query: 595 AKCGDIKGARMAFDQ---SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            + G++  A+  F Q   S  S ++I + T++     +G   EA+    KM+ + L+P+ 
Sbjct: 487 LRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQDSGLRPNA 546

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            +    +SA ++   +  G  +   +        S      LVDM ++ G +  A+ V  
Sbjct: 547 FSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFG 606

Query: 712 IMPFQPSPTVYRSLLSGCRIHGN 734
              +   P +Y +++S   ++GN
Sbjct: 607 SKLYSELP-LYNAMISAYALYGN 628



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 123/551 (22%), Positives = 223/551 (40%), Gaps = 64/551 (11%)

Query: 38  SFLRKD-----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           S +RKD      + ++  LS S N+     G Q H   +  G   D  L  +L+  Y K 
Sbjct: 263 SDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKV 322

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G   +   +FD M ++++V+W L++S  +Q G  +  + M   M+      +   + ++M
Sbjct: 323 GLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLM 382

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
                    +FG  + C+ ++  +E +  +    ++ YAK G +  A++VF S    D+ 
Sbjct: 383 SAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLI 442

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN ++  YA  G   EAL +   M  E +  +  T+                     LI
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITW--------------------NLI 482

Query: 273 IRSEVECSISIVNALIDMYI--KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           I S +      VN   +M++  +SSG+             ++ISW T+  G  +N    +
Sbjct: 483 ILSLLRN--GEVNEAKEMFLQMQSSGI-----------SPNLISWTTMMNGMVQNGCSEE 529

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ-CLALHCGFLDEENVTSSLI 389
                 K   SG RPN  + ++ L     L  L  G  +   +  +       ++ +SL+
Sbjct: 530 AILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLV 589

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A  VF +  Y  +  +N ++S Y       + +  + ++ + G + +  
Sbjct: 590 DMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNI 649

Query: 450 TFFYVVETCCRSENQQMVGQIHGAI-------IKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           TF  ++  C        VG I+ AI        K G   C      ++    + G+ D +
Sbjct: 650 TFTSLLSAC------NHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRA 703

Query: 503 FEFSNGAERLDMASWGAMMSALV---HQGHNHEAVTIF--HSLVEAGEKPDEYILGTILN 557
            +     E +       M+ +LV   ++ H  E V  F  H L    E    Y+  TI N
Sbjct: 704 LKL---IEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYV--TISN 758

Query: 558 SCAAIGAYQRT 568
           + A  G++   
Sbjct: 759 AYAVEGSWDEV 769



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           DS LR +   +  +LS S NL S   G  +HG+IV+ L  ++ + ++ +L+ MY+KCG  
Sbjct: 539 DSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDI 598

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               RVF       L  +  ++SA    G     + +Y  ++  G  P+     S++  C
Sbjct: 599 NKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSAC 658

Query: 156 VSMG 159
             +G
Sbjct: 659 NHVG 662



 Score = 39.3 bits (90), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 23/227 (10%)

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT----KSIHPFVI 576
           +S+L   G   EA+++   +     +    I G IL  C     Y+R     K IH  ++
Sbjct: 42  VSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCV----YERDLCTGKQIHARIL 97

Query: 577 KLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           K G  +    Y+ + ++  YAKC  ++ A++ F +     +V  +  +I      GL   
Sbjct: 98  KNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSK-LRVRNVFSWAAIIGVKCRIGLCEG 156

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSAC-----SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           A+  F +M    + P      +V  AC     S  G    G ++      + G++     
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVV------KAGLEDCVFV 210

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
              L DM  + G L+DA+ V + +P + +   + +LL G   +G  E
Sbjct: 211 ASSLADMYGKCGVLDDARKVFDEIP-ERNVVAWNALLVGYVQNGMNE 256


>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 174/619 (28%), Positives = 310/619 (50%), Gaps = 1/619 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I+  G        N LI +Y+K G+     +VFDE+  ++ VSW  ++S+  QNG
Sbjct: 210 QIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNG 269

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  ++++ +M  +G  P  +   SV+  C  +   + G  +H    K       +V  
Sbjct: 270 FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCN 329

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y++LG+  +A++VF  I   D   +N++I G +  G    AL +   M  + +  
Sbjct: 330 ALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKP 389

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + L  C+ +     G Q+H   I++ +   I I  +L+D+Y+K S +  A K F
Sbjct: 390 DCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFF 449

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                ++V+ WN +   + +  N  ++  +F +  + G  PN  T+  +LR C     LD
Sbjct: 450 ATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALD 509

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+   A+  GF     V S LI M+ + G +++A  +   ++ +++ +W  L++GY 
Sbjct: 510 LGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYT 569

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L  F  +   G++ +   F   +  C   +      QIH     +G+S    
Sbjct: 570 QHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLS 629

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++L+  Y   G++  +       +  D  SW A+MS     G+  EA+ IF  +  A 
Sbjct: 630 IGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRAN 689

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K   +  G+ +++ A +   ++ K IH  ++K GF++E+ V++A+I  YAKCG I GA+
Sbjct: 690 IKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAK 749

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F +    N+ I +N +I  Y+ HG   EA+ +F KMK    +P+  TFV V+SACSH 
Sbjct: 750 REFFEIPEKNE-ISWNAMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSHV 808

Query: 665 GLVDKGCLLFKSMDSQYGM 683
           GLV++G   F+SM  ++G+
Sbjct: 809 GLVNEGLAYFESMSKEHGL 827



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 184/674 (27%), Positives = 327/674 (48%), Gaps = 12/674 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  I+K+GF  +  L + LI  Y   G     ++VFD+M  R+L++W  ++S  + N 
Sbjct: 108 KLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANK 167

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNPFV 182
             +  L ++  M      PNE  V SV++   S G   F Y   IH   +   +  +   
Sbjct: 168 TSNRVLGLFAQMVEENVNPNEVTVASVLRAYGS-GNVAFYYVEQIHASIISRGLGTSSIA 226

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ YAK G + +A +VF  +   D   W A+I  Y+  G+G EA+ +   M   G+
Sbjct: 227 CNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGL 286

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           +   Y F + L  C+ +  FDIG Q+H L+ +        + NAL+ +Y +      A +
Sbjct: 287 SPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQ 346

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF ++  KD +S+N+L  G S+     +   LF K  L   +P+ VT + LL  C  +  
Sbjct: 347 VFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKS 406

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G QL   A+  G   +  +  SL+ ++ +C  +  AH  F     +N+  WN +L  
Sbjct: 407 LSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVA 466

Query: 423 YCFNCCDADVLKTFCNIWESGVE---VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           Y     D ++ K+FC   +  +E    N  T+  ++ TC       +  QIH   IKTGF
Sbjct: 467 Y--GQLD-NLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGF 523

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               Y+CS LI  Y   G+LD +          D+ SW A+++         EA+ +F  
Sbjct: 524 EFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDE 583

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++  G + D     + +++CA I A  + + IH      G++ ++ + +A++  YA+CG 
Sbjct: 584 MLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGR 643

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I+ A +AF++  ++ D I +N L+  +A  G   EA++IF +M  AN++ S  TF S +S
Sbjct: 644 IQEANLAFEK-IDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVS 702

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           A ++   + +G  +  +M  + G     +    L+ + ++ G ++ AK     +P + + 
Sbjct: 703 AAANMANIKQGKQI-HAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIP-EKNE 760

Query: 720 TVYRSLLSGCRIHG 733
             + ++++G   HG
Sbjct: 761 ISWNAMITGYSQHG 774



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 268/525 (51%), Gaps = 2/525 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L   P   +  LS    ++   +G Q+H  + K GF  + ++ N L+ +YS+ G F    
Sbjct: 286 LSPTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQ 345

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF ++  ++ VS+  ++S   Q G  D  L+++  M+ +   P+   V S++  C S+ 
Sbjct: 346 QVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIK 405

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  +H +A+K  +  +  +  S+L+ Y K  D+  A + F +  +++V  WN M+ 
Sbjct: 406 SLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLV 465

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y       ++  +   M  EG+  +++T+ + L+ C+     D+G QIH   I++  E 
Sbjct: 466 AYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEF 525

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ + + LIDMY K   +D A  +  R+ ++DV+SW  L  G++++    +  +LF + +
Sbjct: 526 NVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEML 585

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G + +++ FS  +  C  +  L  G Q+   +   G+ ++ ++ ++L+ ++ RCG ++
Sbjct: 586 NRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQ 645

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A+  F+ +  K+  +WN L+SG+  +    + LK F  +  + ++ +  TF   V    
Sbjct: 646 EANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAA 705

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWG 518
              N +   QIH  I+KTGF S   + ++LI  Y   G +D +  EF    E+ ++ SW 
Sbjct: 706 NMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEI-SWN 764

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           AM++     G   EAV +F  + + G KP+      ++++C+ +G
Sbjct: 765 AMITGYSQHGCGIEAVNLFQKMKQVGAKPNHVTFVGVISACSHVG 809



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 241/507 (47%), Gaps = 7/507 (1%)

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G + L+VV      G      T++  L  C   A F   +++H  I++   +    + + 
Sbjct: 71  GIDFLHVVDE---RGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDK 127

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LI+ Y     ++   KVF+ M  + +++WN +  G   NK   +   LF + +     PN
Sbjct: 128 LIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPN 187

Query: 347 HVTFSILLRQCGK-LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
            VT + +LR  G   +      Q+    +  G        + LI ++ + G +  A  VF
Sbjct: 188 EVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVF 247

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D +  K+  +W  ++S Y  N    + ++ FC +  SG+      F  V+  C + E   
Sbjct: 248 DELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFD 307

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
           +  Q+H  + K GF    Y+C++L+  Y   G   ++ +  +  +  D  S+ +++S L 
Sbjct: 308 IGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLS 367

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            QG +  A+ +F  +     KPD   + ++L++CA+I +  + + +H + IK G   ++ 
Sbjct: 368 QQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDII 427

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           +  +++D Y KC DI  A   F  +  + +V+++N +++AY     +S++  IF +M++ 
Sbjct: 428 IEGSLLDLYVKCSDITTAHKFFATT-QTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIE 486

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L P+Q T+ S++  C+  G +D G  +  S   + G + +      L+DM ++ G L+ 
Sbjct: 487 GLIPNQFTYPSILRTCTSFGALDLGEQI-HSQAIKTGFEFNVYVCSVLIDMYAKLGKLDI 545

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIH 732
           A+ ++  +  +     + +L++G   H
Sbjct: 546 ARGILRRLN-EEDVVSWTALIAGYTQH 571



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 11/336 (3%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQF   S LR    F A  L           G Q+H   +K GF  ++++ + LI MY+K
Sbjct: 491 NQFTYPSILRTCTSFGALDL-----------GEQIHSQAIKTGFEFNVYVCSVLIDMYAK 539

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
            G       +   + E ++VSWT +++   Q+  F   L ++ +M   G   +     S 
Sbjct: 540 LGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSA 599

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  + A   G  IH  +      ++  +G ++++ YA+ G +  A   F  I + D 
Sbjct: 600 ISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDS 659

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNA++ G+A  GY  EAL + + M    I    +TF +A+   + +A+   G+QIH +
Sbjct: 660 ISWNALMSGFAQSGYCEEALKIFAQMTRANIKASLFTFGSAVSAAANMANIKQGKQIHAM 719

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I+++  +  I + NALI +Y K   +D A + F  + +K+ ISWN +  G+S++    + 
Sbjct: 720 IMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFEIPEKNEISWNAMITGYSQHGCGIEA 779

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            +LF K    G++PNHVTF  ++  C  +  ++ GL
Sbjct: 780 VNLFQKMKQVGAKPNHVTFVGVISACSHVGLVNEGL 815



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 19/322 (5%)

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           E G      T+ ++++ C  S +     ++H  I+K GF     +C  LI+ Y   G L+
Sbjct: 80  ERGSRAKSQTYLWLLDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLN 139

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           +  +  +      + +W  ++S LV    ++  + +F  +VE    P+E  + ++L +  
Sbjct: 140 SVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYG 199

Query: 561 AIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +   A+   + IH  +I  G  T     + +ID YAK G I+ AR  FD+     D + +
Sbjct: 200 SGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDE-LCMKDSVSW 258

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFK 675
             +I +Y+ +G   EA+ +F +M ++ L P+   F SV+SAC+   L D G     L+FK
Sbjct: 259 VAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGEQLHALVFK 318

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
                 G          LV + SR G    A+ V   +  +   + Y SL+SG    G  
Sbjct: 319 C-----GFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVS-YNSLISGLSQQG-- 370

Query: 736 ELGEWASEKLLLLLPKNDAAHV 757
                 S++ L L  K    H+
Sbjct: 371 -----CSDRALELFKKMQLDHL 387


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 206/776 (26%), Positives = 369/776 (47%), Gaps = 79/776 (10%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG   H  I+      + FL NNLI+MYSKCG   +  RVFD+M +R+LVSW  I++A 
Sbjct: 56  MLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115

Query: 121 IQNGE-----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            Q+ E           ++  ++ +    +   +  ++K+C+  G      S H +A KI 
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175

Query: 176 I---------------------------EKNPFVGCSVLNF----YAKLG------DVAA 198
           +                           E+ P+    + N     Y ++G      D+++
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235

Query: 199 A------------ERVFYSISSDDVGC--------------------WNAMIGGYAHCGY 226
           A             R+   IS DD                        N  +  Y H G 
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
               L   + M+   +  D+ TFI  L     V    +G+Q+H + ++  ++  +++ N+
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LI+MY K     +A  VF+ M+++D+ISWN++  G ++N    +   LF + +  G +P+
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415

Query: 347 HVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
             T + +L+    L + L L  Q+   A+    + +  V+++LI  + R   ++ A  +F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           +  ++ ++  WN +++GY  +      LK F  + + G   +  T   V +TC       
Sbjct: 476 ERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSAL 524
              Q+H   IK+G+    ++ S ++  YV  G +  + F F +     D+A W  M+S  
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           +  G    A  +F  +   G  PDE+ + T+  + + + A ++ + IH   +KL    + 
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V ++++D YAKCG I  A   F +     ++  +N +++  A HG   E +++F +MK 
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             ++P + TF+ V+SACSH GLV +     +SM   YG++P  + Y CL D L R G ++
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            A+++IE M  + S ++YR+LL+ CR+ G+ E G+  + KLL L P + +A+VLLS
Sbjct: 773 QAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 212/435 (48%), Gaps = 6/435 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +     L+ +  + S  LG QVH   +KLG    + + N+LI MY K   FG+   VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS- 161
           D M+ER+L+SW  +++   QNG     + +++ +   G  P+++ + SV+K   S+    
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
                +H  A+KI    + FV  ++++ Y++   +  AE + +   + D+  WNAM+ GY
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE-ILFERHNFDLVAWNAMMAGY 492

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                G + L + + M  +G   D +T     + C  +   + G+Q+H   I+S  +  +
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + + ++DMY+K   M  A   F+ +   D ++W T+  G  EN    +   +F +  L 
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+  T + L +    L  L+ G Q+   AL     ++  V +SL+ M+ +CG+++ A
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR- 460
           + +F  +   NIT WN +L G   +    + L+ F  +   G++ +  TF  V+  C   
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732

Query: 461 ---SENQQMVGQIHG 472
              SE  + +  +HG
Sbjct: 733 GLVSEAYKHMRSMHG 747



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 104/462 (22%), Positives = 198/462 (42%), Gaps = 48/462 (10%)

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           +D  +G+  H  I+  E      ++N LI MY K   + YA +VF++M D+D++SWN++ 
Sbjct: 53  SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112

Query: 320 GGFSEN-----KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
             ++++     +N  Q   LF          + +T S +L+ C     +         A 
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   +E V  +L+ ++ + G V+    +F+ + Y+++  WN +L  Y       + + 
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
                  SG+  N  T              +++ +I G     G           +KS+ 
Sbjct: 233 LSSAFHSSGLNPNEITL-------------RLLARISGDDSDAG----------QVKSFA 269

Query: 495 NFGQLDNSFE--FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           N     +  E  F N             +S  +H G     +  F  +VE+  + D+   
Sbjct: 270 NGNDASSVSEIIFRNKG-----------LSEYLHSGQYSALLKCFADMVESDVECDQVTF 318

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
             +L +   + +    + +H   +KLG +  + V++++I+ Y K      AR  FD + +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD-NMS 377

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             D+I +N++I   A +GL  EA+ +F ++    L+P Q T  SV+ A S    + +G  
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLS 434

Query: 673 LFKSMDSQ-YGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIE 711
           L K +      +    D +    L+D  SRN  +++A+ + E
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE 476


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 216/797 (27%), Positives = 373/797 (46%), Gaps = 58/797 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D   LA  L     L +  LG  +HG++VK G  +       L+ MY+KCG     L+
Sbjct: 40  KPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLK 99

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSM 158
           +FD+++  + V W +++S    + + D  +     M   +   +PN   V +V+ VC  +
Sbjct: 100 LFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARL 159

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA-AERVFYSISSDDVGCWNAM 217
           G  + G  +H + +K   +++   G ++++ YAK G V+  A  VF +I+  DV  WNAM
Sbjct: 160 GDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAM 219

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKY-TFINALQGCSLVADFD------IGRQIHG 270
           I G A      +A  + SSM+ +G T   Y T  N L  C   A FD       GRQIH 
Sbjct: 220 IAGLAENRLVEDAFLLFSSMV-KGPTRPNYATVANILPVC---ASFDKSVAYYCGRQIHS 275

Query: 271 LIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            +++  E+   +S+ NALI +Y+K   M  A  +F  M  +D+++WN    G++ N    
Sbjct: 276 YVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWL 335

Query: 330 QTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSS 387
           +   LF     L    P+ VT   +L  C +L +L +G Q+        FL  +  V ++
Sbjct: 336 KALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNA 395

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+  + +CG  E A+  F  +S K++ +WN +   +      +  L     + +  +  +
Sbjct: 396 LVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPD 455

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTG-----------------FSSCGYI----- 485
             T   ++  C      + V +IH   I+TG                 +S CG +     
Sbjct: 456 SVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANK 515

Query: 486 -------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
                        C+SLI  YV  G   ++    +G    D+ +W  M+          +
Sbjct: 516 MFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQ 575

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ + H L   G KPD   + ++L  C  + +         ++I+  F  ++++ +A++D
Sbjct: 576 ALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFK-DLHLEAALLD 634

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
           AYAKCG I  A   F  S    D++++  +I  YA HG+  EA+ IF  M    +QP   
Sbjct: 635 AYAKCGIIGRAYKIFQLS-AEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHI 693

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
            F S++SACSH G VD+G  +F S++  +GM+P+ + Y C+VD+L+R G + +A  ++  
Sbjct: 694 IFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTS 753

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLD 772
           +P + +  ++ +LL  C+ H   ELG   + +L  +   +   +++LS            
Sbjct: 754 LPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADA----R 809

Query: 773 HEGVCNVNDGIKTVDLK 789
            +GV  V   ++  DLK
Sbjct: 810 WDGVMEVRRMMRNKDLK 826



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 5/162 (3%)

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE--KPDEYILGTILNSCAAIGAYQRTKS 570
           D  +WG+++ +L  +  + EA+++FH  ++  E  KPD  +L  IL SC+A+ A    ++
Sbjct: 5   DFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRT 64

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA-HH 629
           +H +V+K G  +       +++ YAKCG +      FDQ  +  D +V+N ++  ++  +
Sbjct: 65  LHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQ-LSHCDPVVWNIVLSGFSGSN 123

Query: 630 GLVSEAMEIFDKMKLAN-LQPSQATFVSVMSACSHKGLVDKG 670
              ++ M +F  M  +    P+  T  +V+  C+  G +D G
Sbjct: 124 KCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAG 165


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 310/581 (53%), Gaps = 8/581 (1%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG---YGFEALNVVSSMLFEGI 242
           ++NFYAK G +A A  +F +I   DV  WN++I GY+  G     +  + +   M  + I
Sbjct: 55  LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + YT     +  S +    +GRQ H L+++      I +  +L+ MY K+  ++   K
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS---GSRPNHVTFSILLRQCGK 359
           VF  M +++  +W+T+  G++      +   +F+ F+     GS  ++V F+ +L     
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            + + LG Q+ C+ +  G L    ++++L+ M+ +C ++  A  +FD+   +N  TW+ +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N    + +K F  ++ +G++ +  T   V+  C      +   Q+H  ++K GF
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               +  ++L+  Y   G L ++ +  +  +  D+A W +++S  V    N EA+ ++  
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  AG  P++  + ++L +C+++   +  K +H   IK GF  EV + SA+   Y+KCG 
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++   + F ++ N  DV+ +N +I   +H+G   EA+E+F++M    ++P   TFV+++S
Sbjct: 474 LEDGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSHKG V++G   F  M  Q G+ P  D Y C+VD+LSR G L++AK  IE        
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++R LLS C+ HG  ELG +A EKL+ L  +  + +V LS
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 282/591 (47%), Gaps = 8/591 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L K L+     ++ V G  VHG I++ G +  I   N L+  Y+KCG       +F+ + 
Sbjct: 17  LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76

Query: 107 ERNLVSWTLIVSAAIQNGEFDMG---LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +++VSW  +++   QNG        ++++ +M+    +PN + +  + K   S+ +S  
Sbjct: 77  CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G   H   +K+    + +V  S++  Y K G V    +VF  +   +   W+ M+ GYA 
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196

Query: 224 CGYGFEALNVVSSMLFE---GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            G   EA+ V +  L E   G   D Y F   L   +      +GRQIH + I++ +   
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +++ NAL+ MY K   ++ A K+F+   D++ I+W+ +  G+S+N    +   LF +   
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +G +P+  T   +L  C  +  L+ G QL    L  GF      T++L+ M+ + G +  
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   FD +  +++  W  L+SGY  N  + + L  +  +  +G+  N  T   V++ C  
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSS 435

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++  Q+HG  IK GF     I S+L   Y   G L++           D+ SW AM
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK-SIHPFVIKLG 579
           +S L H G   EA+ +F  ++  G +PD+     I+++C+  G  +R     +    ++G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            + +V   + ++D  ++ G +K A+   + +   + + ++  L+ A  +HG
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 204/663 (30%), Positives = 338/663 (50%), Gaps = 11/663 (1%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG---SVMKVCVSMGAS 161
           ++   L+SWTL +     N ++   +  Y ++   G   +   V     V+K C  +   
Sbjct: 22  LSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYI 81

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  +H   +K   +    +G S+LNFY K G++  A  VF S+ S D   WN +I G 
Sbjct: 82  D-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGC 140

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G   E L    +    G   +  T +  +Q C  +     G Q+HG +I+S +  S 
Sbjct: 141 LDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASW 200

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           S+ N+ + MY     MD A  +F+ M +KDVISW+ + GG+ +         +F K +LS
Sbjct: 201 SVQNSFLCMY-ADVDMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQK-MLS 258

Query: 342 GSR--PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SR  P+ V    +L+ C   +++ +G  +  L +  G   +  V +SLI M+ +C    
Sbjct: 259 TSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAG 318

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF  +  +N  +WN LLSG   N   ++ L    ++   G+E +  T    ++ C 
Sbjct: 319 SAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICK 378

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
              +      +H A I+ G  S   + +SLI +Y     ++ ++E  +   R D+  W  
Sbjct: 379 YFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWST 438

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M++   H G   EA+ +F  + E  E P+   +  +L +C+     +R+   H   I+ G
Sbjct: 439 MIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRG 498

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              EV V +A++D Y+KCG+I+ +R AF+Q    N +I ++T+I AY  +GL  EA+ + 
Sbjct: 499 LAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKN-IITWSTMIAAYGMNGLAHEALALL 557

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +MK   ++P+  T++SV++ACSH GLV+ G  +FKSM   +G+ P  + Y C+VDMLSR
Sbjct: 558 AQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSR 617

Query: 700 NGYLEDAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            G L+DA  +I +MP  F+   +V+ +LLS CR + +  LGE A  ++L L P N A ++
Sbjct: 618 AGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYL 677

Query: 758 LLS 760
           L S
Sbjct: 678 LAS 680



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 255/553 (46%), Gaps = 15/553 (2%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S + G  +H  ++K  F +   + N+++  Y KCG     + VFD M  R+ VSW +++ 
Sbjct: 79  SYIDGKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIH 138

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             +  G    GL  +++ +  GF PN   +  +++ C S+ A + G  +H + ++  +  
Sbjct: 139 GCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWA 198

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  S L  YA + D+  A  +F  +   DV  W+AMIGGY         L +   ML
Sbjct: 199 SWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKML 257

Query: 239 FEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
               IT D    ++ L+ C+   +  +GR +HGL I   ++  + + N+LIDMY K    
Sbjct: 258 STSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDA 317

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             AF+VF  M  ++ +SWN+L  G   NK   +   L +     G   + VT    L+ C
Sbjct: 318 GSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQIC 377

Query: 358 GKLLDLDLGLQLQCLALHCGFL-----DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
                        C A+HC  +       E V +SLI  + +C  +E+A  VF     ++
Sbjct: 378 KYFAH-----PYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRD 432

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYVVETCCRSENQQMVGQIH 471
           +  W+ +++G+  +C   D           G+EV N  T   +++ C  S   +     H
Sbjct: 433 VVLWSTMIAGFA-HCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAH 491

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           GA I+ G ++   + ++++  Y   G+++ S +  N   + ++ +W  M++A    G  H
Sbjct: 492 GAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAH 551

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAV 590
           EA+ +   +     KP+     ++L +C+  G  +   S+   +I+  G + E    S +
Sbjct: 552 EALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCM 611

Query: 591 IDAYAKCGDIKGA 603
           +D  ++ G +  A
Sbjct: 612 VDMLSRAGKLDDA 624



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 230/489 (47%), Gaps = 36/489 (7%)

Query: 55  ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK----CGYFGWGLRVFDEMAERNL 110
            +L+++  G Q+HG++++ G      +QN+ + MY+     C        +FDEM E+++
Sbjct: 176 RSLRAKQEGLQLHGYLIQSGLWASWSVQNSFLCMYADVDMDCARI-----LFDEMPEKDV 230

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +SW+ ++   +Q  E  +GL+++  M  T+   P+   + SV+K C +      G  +H 
Sbjct: 231 ISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHG 290

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +   ++ + FV  S+++ Y+K  D  +A  VF  +   +   WN+++ G        E
Sbjct: 291 LTICRGLDSDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSE 350

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +V SM  EGI  D+ T +N LQ C   A     + +H   IR   E +  ++N+LID
Sbjct: 351 ALLLVYSMRTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLID 410

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
            Y K + ++ A++VF R   +DV+ W+T+  GF+    P +  ++F K       PN VT
Sbjct: 411 AYAKCNLIELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVT 470

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              LL+ C    +L   +     A+  G   E  V ++++ M+ +CG +E +   F+ + 
Sbjct: 471 IINLLQACSVSAELKRSMWAHGAAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIP 530

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            KNI TW+ +++ Y  N    + L     +    ++ N  T+  V+  C           
Sbjct: 531 QKNIITWSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTYLSVLTACS---------- 580

Query: 470 IHGAIIKTGFSSCGYIC------------SSLIKSYVNFGQLDNSFEFSNGAE---RLDM 514
            HG +++ G S    +             S ++      G+LD++ E         R   
Sbjct: 581 -HGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRAGKLDDAMELIRMMPETFRAGA 639

Query: 515 ASWGAMMSA 523
           + WGA++SA
Sbjct: 640 SVWGALLSA 648



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 188/397 (47%), Gaps = 8/397 (2%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
            +  S S +  D + L   L    N  +  +G  VHG  +  G  +D+F++N+LI MYSK
Sbjct: 254 QKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSK 313

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C   G    VF EM  RN VSW  ++S  I N ++   L +   M+T G   +E  + + 
Sbjct: 314 CKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNC 373

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +++C          ++HC  ++   E N  V  S+++ YAK   +  A  VF      DV
Sbjct: 374 LQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDV 433

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHG 270
             W+ MI G+AHCG   EA+ V   M  EGI + +  T IN LQ CS+ A+       HG
Sbjct: 434 VLWSTMIAGFAHCGKPDEAIAVFQKM-NEGIEVPNAVTIINLLQACSVSAELKRSMWAHG 492

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             IR  +   +++  A++DMY K   ++ + K F ++  K++I+W+T+   +  N    +
Sbjct: 493 AAIRRGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHE 552

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
             +L  +      +PN +T+  +L  C  G L+++ L +    +  H G   E    S +
Sbjct: 553 ALALLAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDH-GVDPEFEHYSCM 611

Query: 389 IYMFCRCGAVEMAHSVFDNVS---YKNITTWNELLSG 422
           + M  R G ++ A  +   +        + W  LLS 
Sbjct: 612 VDMLSRAGKLDDAMELIRMMPETFRAGASVWGALLSA 648


>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
 gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
          Length = 883

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 205/739 (27%), Positives = 356/739 (48%), Gaps = 13/739 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   L+  L    +L+    G ++HG I    F + I ++  L+ MY++CG      
Sbjct: 142 IKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAR 201

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD +  ++++ W  +++A  Q G      ++  +M+  G   ++     ++  C S+ 
Sbjct: 202 EVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILGACSSL- 260

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  IH  AL   +  +  V  ++++ Y K  ++ AA RVF  + + DV  W A+I 
Sbjct: 261 --EEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIV 318

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG-LIIRSEVE 278
            Y   G   EAL +   M  EG+  DK TF + L  CS   D ++G+ +H  L+ R +  
Sbjct: 319 AYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGF 378

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
               +V ALI+MY+K   +D + ++F+   D K V+ WN +   + +         L+  
Sbjct: 379 SDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDM 438

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCG 396
               G  P+  T S +L  C +L DL+ G Q+    +      +  V  ++LI M+  CG
Sbjct: 439 MKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCG 498

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            +  A +VF  +  +++ +W  L+S Y         L+ +  +   GV+    T   V+ 
Sbjct: 499 EIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIA 558

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C   E+      IH A+  + F +   + ++LI  Y    +LD + +       L+ ++
Sbjct: 559 ACSAMESLWEGIVIH-ALTDSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRHLESSA 617

Query: 517 --WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
             W AM++A    G   E + ++  +   G K +E      L +C+ +GA +    IH  
Sbjct: 618 NCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGALAACSMLGAVREGYRIHEQ 677

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           V    +++++ + +A++  YAKC  +  A   F+Q     DV+ +N +I AYA +G    
Sbjct: 678 VSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQL--QPDVVAWNAMIAAYAQNGYAWH 735

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+E++ KM L   +P + TF+ V  AC H GLVD+    F+SM     + P+ D Y C+V
Sbjct: 736 ALELYSKM-LHGYKPLEPTFLCVFLACGHAGLVDECKWYFQSMIEDR-ITPTFDHYSCVV 793

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
            +LSR G LE+A+ ++  MPF P    + SLL  CR HG+ +    A+++ + L  ++ A
Sbjct: 794 TVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQDSA 853

Query: 755 AHVLLSKRKRQREGNLLDH 773
            +VLLS          LDH
Sbjct: 854 PYVLLSNVNIFAASGCLDH 872



 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 174/671 (25%), Positives = 318/671 (47%), Gaps = 13/671 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H HIV  G  +D FL ++L+ MY KCG     ++VF  +  R+L SW  I++A  +
Sbjct: 64  GRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPRRSLFSWNFIIAAFAK 123

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      ++M+  M + G  P+   + SV+  C S+   E G  IH        +    V
Sbjct: 124 NRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVV 183

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              ++  YA+ G +  A  VF  I + DV CWN+MI  YA  G+  +A  +   M   G+
Sbjct: 184 ETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGV 243

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                TF   L  CS     + G++IH   +   +  SI + NALI MY K + +D A +
Sbjct: 244 KASDTTFAGILGACS---SLEEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARR 300

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF ++   DV+SW  L   ++++    +   L+ +    G  P+ VTF+ +L  C    D
Sbjct: 301 VFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTND 360

Query: 363 LDLG--LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNEL 419
           L+LG  L  + LA   GF D   + ++LI M+ +CG ++++  +F +    K +  WN +
Sbjct: 361 LELGQALHARLLARKDGFSD-GVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAM 419

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-G 478
           ++ Y         +  +  + + G++ +  T   ++  C   ++ +   Q+H  II +  
Sbjct: 420 ITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIASRD 479

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            S    + ++LI  Y + G++  +       +  D+ SW  ++SA V  G    A+ ++ 
Sbjct: 480 CSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYR 539

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            ++  G +P E  +  ++ +C+A+ +      IH     + F T+  V +A+I  YA+C 
Sbjct: 540 RMLVEGVQPTEVTMLAVIAACSAMESLWEGIVIHALTDSM-FFTDTAVQAALISMYARCR 598

Query: 599 DIKGARMAFDQSFN-SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            +  A   F Q  +  +    +N ++ AY+  GL  E + ++ +M    ++ ++ TF   
Sbjct: 599 RLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAGA 658

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           ++ACS  G V +G  + + + S             LV M ++   ++ A HV E    QP
Sbjct: 659 LAACSMLGAVREGYRIHEQV-SSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFE--QLQP 715

Query: 718 SPTVYRSLLSG 728
               + ++++ 
Sbjct: 716 DVVAWNAMIAA 726



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 159/595 (26%), Positives = 294/595 (49%), Gaps = 12/595 (2%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            +++K C +  A   G  IH   +   +  + F+G  +L  Y K G V  A +VF+++  
Sbjct: 49  AALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHALPR 108

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
             +  WN +I  +A   +G +A+ +  SM   GI  D  T  + L  CS + D + GR+I
Sbjct: 109 RSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGRRI 168

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG I   E +  I +   L+ MY +   +  A +VF+R+ +KDVI WN++   +++  + 
Sbjct: 169 HGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGGHS 228

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            Q   L  +    G + +  TF+ +L  C     L+ G ++   AL  G      V ++L
Sbjct: 229 AQARQLCEEMEGFGVKASDTTFAGILGACSS---LEEGKKIHSRALARGLSSSIIVQNAL 285

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +C  ++ A  VF  V   ++ +W  L+  Y  +  + + L+ +  +   G+E + 
Sbjct: 286 ISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDK 345

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAII--KTGFSSCGYICSSLIKSYVNFGQLDNSFE-F 505
            TF  V+  C  + + ++   +H  ++  K GFS  G + ++LI  YV  G+LD S E F
Sbjct: 346 VTFTSVLSACSNTNDLELGQALHARLLARKDGFSD-GVLVAALINMYVKCGRLDLSSEIF 404

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +  +   +  W AM++A   +G++  AV ++  + + G  PDE  L +IL++CA +   
Sbjct: 405 QSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDL 464

Query: 566 QRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           ++ + +H  +I     +    V +A+I  YA CG+I+ A+  F +  N  DV+ +  LI 
Sbjct: 465 EKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKN-RDVVSWTILIS 523

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           AY   G    A+ ++ +M +  +QP++ T ++V++ACS    + +G ++    DS +   
Sbjct: 524 AYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMESLWEGIVIHALTDSMFFTD 583

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVI-EIMPFQPSPTVYRSLLSGCRIHGNKELG 738
            +      L+ M +R   L+ A  V  ++   + S   + ++L+     G  E G
Sbjct: 584 TA--VQAALISMYARCRRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEG 636



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 226/471 (47%), Gaps = 8/471 (1%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T+   L+ C   A    GR+IH  I+ S +     + + L+ MY K   +D A +VF 
Sbjct: 45  RQTYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFH 104

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +  + + SWN +   F++N++  +   +F     +G +P+  T S +L  C  L DL+ 
Sbjct: 105 ALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEE 164

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G ++        F     V + L+ M+ RCG +  A  VFD +  K++  WN +++ Y  
Sbjct: 165 GRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQ 224

Query: 426 NCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               A   +  C   E  GV+ +  TF  ++  C   E  +   +IH   +  G SS   
Sbjct: 225 GGHSAQA-RQLCEEMEGFGVKASDTTFAGILGACSSLEEGK---KIHSRALARGLSSSII 280

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++LI  Y    +LD +    +     D+ SW A++ A    G N EA+ ++  +   G
Sbjct: 281 VQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEG 340

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVI--KLGFNTEVYVASAVIDAYAKCGDIKG 602
            +PD+    ++L++C+     +  +++H  ++  K GF+  V VA A+I+ Y KCG +  
Sbjct: 341 MEPDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVA-ALINMYVKCGRLDL 399

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +   F    ++  V+V+N +I AY   G    A++++D MK   L P ++T  S++SAC+
Sbjct: 400 SSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACA 459

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
               ++KG  +   + +      +P     L+ M +  G + +AK V + M
Sbjct: 460 ELKDLEKGEQVHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFKRM 510



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 187/385 (48%), Gaps = 4/385 (1%)

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T++ LL+ CG    L  G ++    +  G   +  +   L+ M+ +CG+V+ A  VF  +
Sbjct: 47  TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +++ +WN +++ +  N      ++ F ++  +G++ +  T   V+  C    + +   
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGR 166

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IHG I    F S   + + L+K Y   G+L  + E  +  E  D+  W +M++A    G
Sbjct: 167 RIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVFDRIENKDVICWNSMIAAYAQGG 226

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           H+ +A  +   +   G K  +     IL +C+++   +  K IH   +  G ++ + V +
Sbjct: 227 HSAQARQLCEEMEGFGVKASDTTFAGILGACSSL---EEGKKIHSRALARGLSSSIIVQN 283

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+I  Y KC ++  AR  F +   ++DV+ +  LI+AY  HG   EA+E++ +M+   ++
Sbjct: 284 ALISMYGKCNELDAARRVFSK-VRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGME 342

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P + TF SV+SACS+   ++ G  L   + ++            L++M  + G L+ +  
Sbjct: 343 PDKVTFTSVLSACSNTNDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSE 402

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHG 733
           + +      +  V+ ++++     G
Sbjct: 403 IFQSCKDTKAVVVWNAMITAYEQEG 427


>gi|347954482|gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
          Length = 732

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 186/693 (26%), Positives = 340/693 (49%), Gaps = 35/693 (5%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 69  GKQIHARILKKGDFYARNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAIIGVK 128

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H + +K       
Sbjct: 129 CRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCV 188

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ + S M  E
Sbjct: 189 FVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKE 248

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   + T    L   + +   + G+Q H + + + +E    +  ++++ Y K   ++ A
Sbjct: 249 GVEPTRVTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECA 308

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+RM +KDV++WN L  G+ +         +     L   + + VT S L+    + 
Sbjct: 309 EMIFDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAART 368

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            D  LG ++Q   +      +  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 369 QDSKLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLL 428

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y  +    + L+ F  +    V  N  T+  ++ +  R+      GQ++ A       
Sbjct: 429 GAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN------GQVNEA------- 475

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S    N      + SW  MM+ LV  G + EA+     +
Sbjct: 476 ------------KEMFLQMQSSGIIPN------LVSWTTMMNGLVQNGCSEEAILFLRKM 517

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++CA + +    +SIH ++I+   + + V + ++++D YAKCGD
Sbjct: 518 QESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCGD 577

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I  +A +G V EA+ ++  ++   ++P   TF S++S
Sbjct: 578 INKAERVFRSKLYS-ELPLYNAMISGFAVYGNVKEAIGLYRSLEDMGIKPDSITFTSLLS 636

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+H G +++   +F  M S++G++P  + YG +VD+L+  G  + A  ++E MP++P  
Sbjct: 637 ACNHAGDINQAFEIFTDMVSKHGLKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDA 696

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
            + +SL + C+     EL E+ S +LL   P N
Sbjct: 697 RMVQSLFATCKKQHKDELVEYLSRQLLESEPDN 729



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 232/495 (46%), Gaps = 34/495 (6%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-------RSEVECSI 281
           EAL++V+ M F  I +    +   LQGC    +   G+QIH  I+       R+E     
Sbjct: 33  EALSLVTEMDFRKIRIGPEIYGEILQGCVYKRNLCTGKQIHARILKKGDFYARNEY---- 88

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFH 336
            I   L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F 
Sbjct: 89  -IETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMG-----FV 142

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + + +G  P++     + + CG L     G  +    +  GF D   V SSL  M+ +CG
Sbjct: 143 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCVFVASSLADMYGKCG 202

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++ A  VFD +  +N+  WN L+ GY  N  + + ++ F ++ + GVE    T      
Sbjct: 203 VLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTV----- 257

Query: 457 TCCRSENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           + C S +  M G     Q H   +  G      + +S++  Y   G ++ +    +    
Sbjct: 258 STCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRMVE 317

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ +W  ++S  V QG   +A+ +  S+     K D   L T++++ A     +  K +
Sbjct: 318 KDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDSKLGKEV 377

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + I+    +++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL
Sbjct: 378 QSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQ-KDLILWNTLLGAYAESGL 436

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   + 
Sbjct: 437 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GIIPNLVSWT 495

Query: 692 CLVDMLSRNGYLEDA 706
            +++ L +NG  E+A
Sbjct: 496 TMMNGLVQNGCSEEA 510



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/447 (21%), Positives = 187/447 (41%), Gaps = 47/447 (10%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   V  G   D  L  +++  Y K G       +FD 
Sbjct: 255 VTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDR 314

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  +  ++M   M+      +   + ++M        S+ G
Sbjct: 315 MVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDSKLG 374

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +  + ++  +E +  +  + ++ YAK G +  A++VF S    D+  WN ++G YA  
Sbjct: 375 KEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGAYAES 434

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 435 GLSGEALRLFYEMQLESVPPNVITW----------------------------------- 459

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVI----SWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I   +++  ++ A ++F +M    +I    SW T+  G  +N    +      K   
Sbjct: 460 NLIILSLLRNGQVNEAKEMFLQMQSSGIIPNLVSWTTMMNGLVQNGCSEEAILFLRKMQE 519

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL----HCGFLDEENVTSSLIYMFCRCG 396
           SG RPN  + ++ L  C  L  L  G  +    +    HC  +   ++ +SL+ M+ +CG
Sbjct: 520 SGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQRHCSSV---SIETSLVDMYAKCG 576

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            +  A  VF +  Y  +  +N ++SG+       + +  + ++ + G++ +  TF  ++ 
Sbjct: 577 DINKAERVFRSKLYSELPLYNAMISGFAVYGNVKEAIGLYRSLEDMGIKPDSITFTSLLS 636

Query: 457 TCCRSENQQMVGQIHGAII-KTGFSSC 482
            C  + +     +I   ++ K G   C
Sbjct: 637 ACNHAGDINQAFEIFTDMVSKHGLKPC 663



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 146/343 (42%), Gaps = 72/343 (20%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF---- 95
           L+ D + L+  +S +   +   LG +V  + ++    +DI L +  + MY+KCG      
Sbjct: 351 LKFDCVTLSTLMSAAARTQDSKLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAK 410

Query: 96  ---------------------------GWGLRVFDEM----AERNLVSWTLIVSAAIQNG 124
                                      G  LR+F EM       N+++W LI+ + ++NG
Sbjct: 411 KVFDSTVQKDLILWNTLLGAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 470

Query: 125 EFDMGLKMYVDMKTNGFM-----------------------------------PNEFAVG 149
           + +   +M++ M+++G +                                   PN F++ 
Sbjct: 471 QVNEAKEMFLQMQSSGIIPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNVFSIT 530

Query: 150 SVMKVCVSMGASEFGYSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             +  C ++ +  +G SIH + ++  R   +  +  S+++ YAK GD+  AERVF S   
Sbjct: 531 VALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCGDINKAERVFRSKLY 590

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            ++  +NAMI G+A  G   EA+ +  S+   GI  D  TF + L  C+   D +   +I
Sbjct: 591 SELPLYNAMISGFAVYGNVKEAIGLYRSLEDMGIKPDSITFTSLLSACNHAGDINQAFEI 650

Query: 269 -HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
              ++ +  ++  +     ++D+   +   D A ++ E M  K
Sbjct: 651 FTDMVSKHGLKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 693



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS   NL S   G  +HG+I++     + + ++ +L+ MY+KCG  
Sbjct: 519 ESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCGDI 578

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               RVF       L  +  ++S     G     + +Y  ++  G  P+     S++  C
Sbjct: 579 NKAERVFRSKLYSELPLYNAMISGFAVYGNVKEAIGLYRSLEDMGIKPDSITFTSLLSAC 638

Query: 156 VSMG 159
              G
Sbjct: 639 NHAG 642


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 199/699 (28%), Positives = 340/699 (48%), Gaps = 16/699 (2%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +FLA +L++   LK    G  +H  I      +D+ + N L++MY KCG       +FD 
Sbjct: 232 VFLA-ALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFDC 290

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA-SEF 163
           +  RN++SWT++VS   +NG       +   M   G  P++  + +++ VC S G   E 
Sbjct: 291 LERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDED 350

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIGG 220
            +  H + +   +++   V  ++L+ +A+ G V  A  +F  +   S+  + CWNAMI  
Sbjct: 351 SWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA 410

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YAH G   EAL ++ S+  +G+  +  TFI++L  CS + D   GR +H LI  S  +  
Sbjct: 411 YAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESGFDQE 467

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +S+ NAL+ MY K   +  + K+F  MA+KD+ SWN+     S +    +   L  +   
Sbjct: 468 VSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRG 527

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G     VTF   L  C     L  G+ +    + CG+  +  V S++I M+ RCG ++ 
Sbjct: 528 EGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDR 587

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  +F  V   ++  W  +L+ YC       V++ F ++   G++  G T   ++ TC  
Sbjct: 588 AREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLI-TCVA 646

Query: 461 SENQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
               +       I     ++G  S   + +SLI+ +  F  L  +    +      +A  
Sbjct: 647 DSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALH 706

Query: 518 GAMMSALVHQGHNHE-AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
             M++A V      E A+T+F  ++  G +P    L T +++C  +     +K +H    
Sbjct: 707 TTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERAR 766

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +LG  +E  VA+ ++D Y K GD+  AR  FD++   N V  +N +  AY   G+    +
Sbjct: 767 ELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRN-VTTWNAMAGAYRQCGVTRGVL 825

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +   M+    +P   TFVS++S C H GL+++    F +M  ++G+ PSP  Y C++D+
Sbjct: 826 WLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDL 885

Query: 697 LSRNGYLEDAKHVI-EIMPFQP-SPTVYRSLLSGCRIHG 733
           L+R G L+ A+  I  I    P S  ++ +LL  CR  G
Sbjct: 886 LARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLG 924



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 186/686 (27%), Positives = 317/686 (46%), Gaps = 26/686 (3%)

Query: 63  GTQVHGHIVKLGFTND-------IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           G ++H  I + G   D        FL N L+ MY KCG      R FD +A +N+ SWT 
Sbjct: 33  GKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTS 92

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC------ 169
           I+ A    G     L+ +  M   G  P+      ++K C  +G    G  +H       
Sbjct: 93  ILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESG 152

Query: 170 FALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             L  R E    F+G  ++  Y K G    A+R F SI+  ++  W +++  Y H G   
Sbjct: 153 LLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHA 212

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL     M+  G+  D+  F+ AL  C ++   + G  IH  I    ++  + I NAL+
Sbjct: 213 QALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPLDSDLEIGNALV 272

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY K   +D A ++F+ +  ++VISW  L   F+EN    +T  L     + G +P+ V
Sbjct: 273 SMYGKCGRLDLAKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKV 332

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDN 407
               LL  C     LD    +    +  G LD E  V ++L+ MF RCG V+ A  +F+ 
Sbjct: 333 LLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARCGRVDKAREIFEK 392

Query: 408 V---SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           V   S + I  WN +++ Y    C  + L    ++   GV+ N  TF   +  C   ++ 
Sbjct: 393 VADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQDG 452

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSA 523
           +    +H  I ++GF     + ++L+  Y   G  LD++  FS  AE+ D+ASW + ++A
Sbjct: 453 R---ALHLLIHESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEK-DLASWNSAIAA 508

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
             + G + E + +   +   G   ++    T LNSC    + Q    +H  +++ G+  +
Sbjct: 509 HSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEAD 568

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             VASAVI+ Y +CG +  AR  F +   + DVI++  ++  Y   G   + ME F  M 
Sbjct: 569 TVVASAVINMYGRCGGLDRAREIFTR-VKTFDVILWTGMLTVYCQLGRTKQVMEHFRSML 627

Query: 644 LANLQPSQATFVSVMSACSHKGLVD-KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
              L+P+  T V++++  +  GL   +  +   S+  + G++        L++M S    
Sbjct: 628 HEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESGLESETMVANSLIEMFSEFRS 687

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSG 728
           L  A+ + +  P + S  ++ ++L+ 
Sbjct: 688 LSQARAIFDRNP-EKSVALHTTMLAA 712



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 179/377 (47%), Gaps = 15/377 (3%)

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS-------LIYMFCRCGAVEMA 401
           +++ LL++CG+L DL  G +L       G L ++   S        L+ M+ +CG  + A
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
              FD++++KNI +W  +L  Y      A  L+ F  + ++GVE +   +  +++ C R 
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRL 135

Query: 462 ENQQMVGQIHGAIIKTGF-------SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
            +     ++H  I ++G        S   ++ + L++ Y   G+ D +    +     ++
Sbjct: 136 GDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNI 195

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW +++ A  H G + +A+  FH +++AG +PD  +    LN C  +   +    IH  
Sbjct: 196 FSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQ 255

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +     ++++ + +A++  Y KCG +  A+  FD      +VI +  L+  +A +G   E
Sbjct: 256 IQDKPLDSDLEIGNALVSMYGKCGRLDLAKELFD-CLERRNVISWTILVSVFAENGRRRE 314

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
              +   M +  ++P +   +++++ CS +G++D+   +        G+         L+
Sbjct: 315 TWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALL 374

Query: 695 DMLSRNGYLEDAKHVIE 711
            M +R G ++ A+ + E
Sbjct: 375 SMFARCGRVDKAREIFE 391



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 4/185 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L    + L  ++S    L       +VH    +LG  ++  + N L+ MY K G      
Sbjct: 735 LEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTAR 794

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD    RN+ +W  +  A  Q G     L +   M+ +G+ P+     S++ VC   G
Sbjct: 795 YIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSG 854

Query: 160 -ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC---WN 215
              E  Y+      +  I+ +P     V++  A+ G++  AE     IS         W 
Sbjct: 855 LLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWM 914

Query: 216 AMIGG 220
           A++G 
Sbjct: 915 ALLGA 919


>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
 gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
          Length = 623

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 174/598 (29%), Positives = 303/598 (50%), Gaps = 4/598 (0%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H   +   ++ + ++G  ++  Y + G +  A   F  I   +V  W  +I     
Sbjct: 21  GRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTILISLLVQ 80

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   E L ++  M  EG   +K TFI+ L  CS+  D  +G++IH  +    +E  I  
Sbjct: 81  NGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKGLETDIIT 140

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL++MY     +D A  VFERM  +DV+SW  +   ++    P +   L+ +     S
Sbjct: 141 GNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFS 200

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RP+ VT   +L  C  L  L  G  +    +  G   +  V ++++  + +C AV+ A  
Sbjct: 201 RPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDARQ 260

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD +  K+I  WN ++  Y  N C+      +  + E+ +  N  T   ++++C  +  
Sbjct: 261 VFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSSTCK 320

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAER-LDMASWGAMM 521
            +    +H      G+ S   + ++LI  Y   G L+N+   F     R  ++ +W  M+
Sbjct: 321 MERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNTMI 380

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
            A   +  N EA+ I+H + + G K  +   GT+L  CA  G +   + +H   +  G  
Sbjct: 381 VANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCC 440

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V V +++I  Y  CG+++ A+ AF +S  S +V+ +++++ AYA +G    A  +F  
Sbjct: 441 SDV-VQNSLICLYGGCGNLEAAQTAF-ESVASKNVVSWSSIVAAYARNGEEDRARNLFWT 498

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M    + P+  TF SV+ ACSH GL D+G   F SM   + ++P+P+ YGC+V++L+++G
Sbjct: 499 MNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPEHYGCMVNLLAKSG 558

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++ A   +  MP QP  + +RSLL  C +H +KE G  A+++LL   P+N AA+VLL
Sbjct: 559 RVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDAEPRNSAAYVLL 616



 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 242/510 (47%), Gaps = 3/510 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N KS   G +VH  ++  G   D +L N L+ MY +CG        F  + +RN+ SWT+
Sbjct: 14  NSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNVFSWTI 73

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S  +QNGE   GL++   M   G   N+    S++  C   G    G  IH       
Sbjct: 74  LISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIHERVRAKG 133

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E +   G ++LN Y     +  A  VF  +   DV  W  +I  YAH GY  EAL +  
Sbjct: 134 LETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYR 193

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  E    D  T I+ L+ C+ +     G+ IH  I+ S VE  + +  A++  Y K  
Sbjct: 194 RMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCE 253

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D A +VF+R+ DKD++ WN + G +++N    +  +L+ + + +  RPN VT   LL 
Sbjct: 254 AVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLD 313

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NI 413
            C     ++ G  L   A   G+L   +V ++LI M+ +CG++E A  VF   + +  N+
Sbjct: 314 SCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNV 373

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TWN ++        + + L+ +  + + G++ +  T+  V+  C    +     ++H  
Sbjct: 374 ITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSR 433

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            + TG  S   + +SLI  Y   G L+ +          ++ SW ++++A    G    A
Sbjct: 434 SLATGCCS-DVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRA 492

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             +F ++ + G  P+     ++L++C+  G
Sbjct: 493 RNLFWTMNQDGVLPNIVTFTSVLHACSHAG 522



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 3/321 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F R D + L   L    +L++ V G  +H  IV  G   D+F+   +++ Y KC      
Sbjct: 199 FSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVSFYGKCEAVDDA 258

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VFD + ++++V W  ++ A  QN   +    +Y++M  N   PN+  + +++  C S 
Sbjct: 259 RQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVTLITLLDSCSST 318

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS--SDDVGCWNA 216
              E G S+H  A       +  V  +++N YAK G +  A RVF   +  + +V  WN 
Sbjct: 319 CKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEATNRTTNVITWNT 378

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI   A      EAL +   M  EGI     T+   L  C+   DF  GR++H   + + 
Sbjct: 379 MIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTGREVHSRSLATG 438

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
             CS  + N+LI +Y     ++ A   FE +A K+V+SW+++   ++ N    +  +LF 
Sbjct: 439 C-CSDVVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFW 497

Query: 337 KFILSGSRPNHVTFSILLRQC 357
                G  PN VTF+ +L  C
Sbjct: 498 TMNQDGVLPNIVTFTSVLHAC 518



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 175/361 (48%), Gaps = 2/361 (0%)

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T+  LL+Q G    L  G ++    +  G   +  + + L+ M+ RCG+++ A + F  +
Sbjct: 4   TYEALLKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGI 63

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +N+ +W  L+S    N   ++ L+    +   G E N  TF  ++  C  + +  +  
Sbjct: 64  HQRNVFSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGK 123

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IH  +   G  +     ++L+  Y     LD +          D+ SW  ++SA  H G
Sbjct: 124 KIHERVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAG 183

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           +  EA+ ++  + +   +PD   L ++L +CA++      K+IH  ++  G  T+V+V +
Sbjct: 184 YPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGT 243

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           AV+  Y KC  +  AR  FD+  +  D++ +N +I AYA +    +A  ++ +M    ++
Sbjct: 244 AVVSFYGKCEAVDDARQVFDRIMD-KDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMR 302

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P+  T ++++ +CS    +++G  L +   ++ G          L++M ++ G LE+A  
Sbjct: 303 PNDVTLITLLDSCSSTCKMERGSSLHREAAAR-GYLSHTSVVNALINMYAKCGSLENATR 361

Query: 709 V 709
           V
Sbjct: 362 V 362



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 11/187 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++   +     L++  N      G +VH   +  G  +D+ +QN+LI +Y  CG      
Sbjct: 404 IKASDVTYGTVLAVCANFGDFTTGREVHSRSLATGCCSDV-VQNSLICLYGGCGNLEAAQ 462

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+ +A +N+VSW+ IV+A  +NGE D    ++  M  +G +PN     SV+  C   G
Sbjct: 463 TAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAG 522

Query: 160 ASEFGYSIHCFALKIR----IEKNP-FVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
            ++ G+S   + L ++    +E  P   GC V N  AK G V  A     ++    D   
Sbjct: 523 LADEGWS---YFLSMQGDHHLEPTPEHYGCMV-NLLAKSGRVKQAASFMSAMPVQPDASA 578

Query: 214 WNAMIGG 220
           W +++G 
Sbjct: 579 WRSLLGA 585


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 189/678 (27%), Positives = 336/678 (49%), Gaps = 8/678 (1%)

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           S+  I++     G F   L  Y  M +    P+     S++K C S+     G S H   
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +      + ++  S++NFY+K G   +A +VF ++   +V  W  MIG Y   G    A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++ + M  +GI     T +  L G   V +    + +H  +I+      +++ N+++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSG---VLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ A  +FE M  +DVISWN+L  G+++  N  +   L  +    G  P+  TF 
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            L+        L +G  +    L  G   + ++ +SLI M+ +CG V  A  +F+ + +K
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +W  ++SG   N C    +  F  + +S V  +  T   V+  C    +  +   +H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G I++          +SL+  Y   G L+ S    +   R D+ SW A++S     GH  
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+ +F+ + +A ++PD   + ++L +CA+IGA  + K IH FV K      + + +A++
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y+KCGD+  A+  FD+     D++ ++++I  Y  HG    A+ ++       +QP+ 
Sbjct: 492 DMYSKCGDLGSAQKCFDR-MPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             ++S++SACSH GLVD+G   F SM   +G++P  +   C+VD+LSR G +E+A    +
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLL 771
            M  +PS  V   LL  CR  GN ELG+  + ++++L P N   +V L+        ++ 
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLA----HSYASMK 666

Query: 772 DHEGVCNVNDGIKTVDLK 789
             +GV  V   +K++ LK
Sbjct: 667 RWDGVGEVWTQMKSLHLK 684



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 269/566 (47%), Gaps = 8/566 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++  G+++D ++  +LI  YSK G+     +VFD M +RN+V WT ++    +
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
            GE D+   MY  M+  G  P+     SV  + +  G  E  +   +H   ++     + 
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPS-----SVTMLGLLSGVLELVHLQCLHACVIQYGFGSDV 181

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S+LN Y K G V  A+ +F  + + DV  WN+++ GYA  G   E L ++  M  +
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D+ TF + +   ++ +   +G+ +HG I+R+ +E    I  +LI MY+K   ++ A
Sbjct: 242 GIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA 301

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           F++FE M  KDVISW  +  G  +N       ++F + + S   P+  T + +L  C +L
Sbjct: 302 FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAEL 361

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
               LG  +    L      +    +SL+ M+ +CG +E + SVFD +S ++I +WN ++
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+  N      L  F  + ++    +  T   +++ C           IH  + K+   
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLG 481

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            C  I ++L+  Y   G L ++ +  +   + D+ SW ++++     G    A+ ++   
Sbjct: 482 PCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDF 541

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  G +P+  I  +IL++C+  G   +  S  H      G    +   + ++D  ++ G 
Sbjct: 542 LHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGR 601

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ A   + + F    + V   L+ A
Sbjct: 602 VEEAYSFYKRMFPKPSMDVLGILLDA 627



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 231/504 (45%), Gaps = 45/504 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  +++ GF +D+ L N+++ +Y KCG       +F+ M  R+++SW  +VS   Q G 
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L++ + MKT+G  P++   GS++           G  +H   L+  +E++  +  S
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  Y K G+V +A R+F  +   DV  W AMI G         A+ V   ML   +   
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  + L  C+ +  F +G  +HG I+R  ++  I   N+L+ MY K   ++ +  VF+
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM+ +D++SWN +  G ++N +  +   LF++   +  RP+ +T   LL+ C  +  L  
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQ 467

Query: 366 GLQLQ------CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           G  +       CL   C  +D     ++L+ M+ +CG +  A   FD +  +++ +W+ +
Sbjct: 468 GKWIHNFVTKSCLG-PCILID-----TALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSI 521

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  +      L+ + +   +G++ N   +  ++  C            H  ++  G 
Sbjct: 522 IAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS-----------HNGLVDQGL 570

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           S       S+ K +    +L++                  ++  L   G   EA + +  
Sbjct: 571 S----FFHSMTKDFGIEPRLEHR---------------ACIVDLLSRAGRVEEAYSFYKR 611

Query: 540 LVEAGEKPDEYILGTILNSCAAIG 563
           +     KP   +LG +L++C   G
Sbjct: 612 MF---PKPSMDVLGILLDACRTTG 632



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 190/362 (52%), Gaps = 4/362 (1%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           SL  +  ++S++ +G  VHGHI++ G   D  ++ +LI MY KCG      R+F+ M  +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           +++SWT ++S  +QN   DM + ++  M  +  MP+   + SV+  C  +G+   G S+H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
            + L+ RI+ +     S++  YAK G +  +  VF  +S  D+  WNA++ G+A  G+  
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL + + M       D  T ++ LQ C+ +     G+ IH  + +S +   I I  AL+
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNH 347
           DMY K   +  A K F+RM  +D++SW+++  G+  +   G+TA  ++  F+ +G +PNH
Sbjct: 492 DMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSH-GKGETALRMYSDFLHTGIQPNH 550

Query: 348 VTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           V +  +L  C     +D GL     +    G        + ++ +  R G VE A+S + 
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610

Query: 407 NV 408
            +
Sbjct: 611 RM 612



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 1/265 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A  L+    L S  LGT VHG+I++     DI  QN+L+ MY+KCG+      VFD M+
Sbjct: 351 IASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS 410

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R++VSW  IVS   QNG     L ++ +M+     P+   V S+++ C S+GA   G  
Sbjct: 411 RRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKW 470

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH F  K  +     +  ++++ Y+K GD+ +A++ F  +   D+  W+++I GY   G 
Sbjct: 471 IHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVN 285
           G  AL + S  L  GI  +   +++ L  CS     D G    H +     +E  +    
Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRA 590

Query: 286 ALIDMYIKSSGMDYAFKVFERMADK 310
            ++D+  ++  ++ A+  ++RM  K
Sbjct: 591 CIVDLLSRAGRVEEAYSFYKRMFPK 615



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 13/181 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I +   L    ++ +   G  +H  + K      I +   L+ MYSKCG  G   +
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQK 505

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC----- 155
            FD M +++LVSW+ I++    +G+ +  L+MY D    G  PN     S++  C     
Sbjct: 506 CFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGL 565

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA----ERVFYSISSDDV 211
           V  G S F      F ++ R+E      C +++  ++ G V  A    +R+F   S D +
Sbjct: 566 VDQGLSFFHSMTKDFGIEPRLEHR---AC-IVDLLSRAGRVEEAYSFYKRMFPKPSMDVL 621

Query: 212 G 212
           G
Sbjct: 622 G 622


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 183/614 (29%), Positives = 311/614 (50%), Gaps = 41/614 (6%)

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           +N Y+K      A ++    S  D+  W+A+I GY   G G EAL     M   G   ++
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEV--------ECSISIV-------------- 284
           +TF + L+GCSL  + ++G+QIH + + +E+        E S+S V              
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 285 ------------------NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
                             NAL+DMY KS   + A  VF  +   D++SWN +  G   ++
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
                  L  K       P+  T S  L+ C  +  + LG QL    +      +  V  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            LI M+ +CG ++ A  VFD +  K++  WN ++SGY     D + +  F N+++ G+E 
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N  T   ++++   S+      Q+H   IK+G+   GY+ +SL+ SY     L+++ +  
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                 D+ ++ +M++A    G   EA+ ++  + +   KPD +I  ++ N+CA + AY+
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
           + K IH  V+K G  ++V+  +++++ YAKCG I  A   F++  +   ++ ++ +I   
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNE-ISWRGIVSWSAMIGGL 567

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A HG   +A+++F +M    + P+  T VSV+SAC+H GLV +    F  M+  +G+ P+
Sbjct: 568 AQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPT 627

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            + Y C+VD+L R G L++A  +++ MPFQ S  V+ +LL   RIH N ELG  A+E LL
Sbjct: 628 QEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLL 687

Query: 747 LLLPKNDAAHVLLS 760
            L P+    H+LL+
Sbjct: 688 TLEPEKSGTHILLA 701



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 249/503 (49%), Gaps = 3/503 (0%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           K+IHR+    +  S   +  +   L+  L+    L+    G +VHG+++KLG+ +D F  
Sbjct: 168 KQIHRVALVTEMISTG-ISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSA 226

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N L+ MY+K G     + VF E+ + ++VSW  +++  + + + D+ LK+   M +    
Sbjct: 227 NALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVA 286

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+ F + S +K C ++G  + G  +H   +K+ +E + FVG  +++ Y+K G +  A  V
Sbjct: 287 PSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMV 346

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   DV  WN++I GY++CGY  EA+++ ++M  EG+  ++ T    L+  +     
Sbjct: 347 FDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQAN 406

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
               Q+H + I+S  +    + N+L+D Y K   ++ A KVFE    +D++++ ++   +
Sbjct: 407 GFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAY 466

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           S+     +   ++ +      +P+   FS L   C  L   + G Q+    L CG L + 
Sbjct: 467 SQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDV 526

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
              +SL+ M+ +CG+++ A  +F+ +S++ I +W+ ++ G   +      L+ F  + ++
Sbjct: 527 FAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKN 586

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDN 501
           G+  N  T   V+  C  +       +  G + K  G +      + ++      G+LD 
Sbjct: 587 GILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDE 646

Query: 502 SFEFSNGAE-RLDMASWGAMMSA 523
           +         +   A WGA++ A
Sbjct: 647 AMVLVKEMPFQASAAVWGALLGA 669



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/637 (23%), Positives = 274/637 (43%), Gaps = 50/637 (7%)

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY------------ 133
           + +YSKC  F    ++  + +E +LVSW+ ++S  +QNG  +  L  Y            
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 134 ----------------------------VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
                                        +M + G  PNEF++ +V+  C  +    +G 
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            +H + +K+  + +PF   ++L+ YAK G   AA  VFY I   D+  WNA+I G     
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               AL ++  M    +    +T  +AL+ C+ +    +GRQ+H  +++ ++E    +  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            LIDMY K   +  A  VF+ M  KDVI WN++  G+S      +  SLF      G   
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T S +L+            Q+  +++  G+  +  V +SL+  + +C  +E A  VF
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           +    +++  +  +++ Y       + LK +  + +  ++ +   F  +   C      +
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
              QIH  ++K G  S  +  +SL+  Y   G +D++    N      + SW AM+  L 
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLA 568

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEV 584
             GH  +A+ +F+ +++ G  P+   L ++L++C   G     +     + KL G     
Sbjct: 569 QHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQ 628

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG---LVSEAMEIFDK 641
              + ++D   + G +  A +   +        V+  L+ A   H    L   A E+   
Sbjct: 629 EHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEM--- 685

Query: 642 MKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSM 677
             L  L+P ++ T + + +  +  G+ D    + +SM
Sbjct: 686 --LLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSM 720



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/514 (22%), Positives = 239/514 (46%), Gaps = 46/514 (8%)

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D   G  IH  IIR      + + N L+++Y K      A K+    ++ D++SW+ L  
Sbjct: 65  DVSSGMAIHARIIRLG---LLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALIS 121

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL------ 374
           G+ +N    +    +++  L G++ N  TFS +L+ C    +L+LG Q+  +AL      
Sbjct: 122 GYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIS 181

Query: 375 ---------------HCGFLDEENV-------------------TSSLIYMFCRCGAVEM 400
                           C  L++EN                     ++L+ M+ + G  E 
Sbjct: 182 TGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEA 241

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A +VF  +   +I +WN +++G   +  +   LK    +    V  +  T    ++ C  
Sbjct: 242 AIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAA 301

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++  Q+H A++K       ++   LI  Y   G L ++    +     D+  W ++
Sbjct: 302 IGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSI 361

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S   + G++ EA+++F ++ + G + ++  L TIL S A   A    + +H   IK G+
Sbjct: 362 ISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGY 421

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             + YVA++++D+Y KC  ++ A   F+    + D++ Y ++I AY+ +GL  EA++++ 
Sbjct: 422 QYDGYVANSLLDSYGKCCLLEDAAKVFEVC-PAEDLVAYTSMITAYSQYGLGEEALKMYL 480

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M+  +++P    F S+ +AC++    ++G  +   +  + G+         LV+M ++ 
Sbjct: 481 RMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV-LKCGLLSDVFAGNSLVNMYAKC 539

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           G ++DA  +   + ++     + +++ G   HG+
Sbjct: 540 GSIDDASCIFNEISWR-GIVSWSAMIGGLAQHGH 572


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 189/678 (27%), Positives = 336/678 (49%), Gaps = 8/678 (1%)

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           S+  I++     G F   L  Y  M +    P+     S++K C S+     G S H   
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +      + ++  S++NFY+K G   +A +VF ++   +V  W  MIG Y   G    A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++ + M  +GI     T +  L G   V +    + +H  +I+      +++ N+++++Y
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLLSG---VLELVHLQCLHACVIQYGFGSDVALANSMLNVY 191

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ A  +FE M  +DVISWN+L  G+++  N  +   L  +    G  P+  TF 
Sbjct: 192 CKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFG 251

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            L+        L +G  +    L  G   + ++ +SLI M+ +CG V  A  +F+ + +K
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +W  ++SG   N C    +  F  + +S V  +  T   V+  C    +  +   +H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G I++          +SL+  Y   G L+ S    +   R D+ SW A++S     GH  
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+ +F+ + +A ++PD   + ++L +CA+IGA  + K IH FV K      + + +A++
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y+KCGD+  A+  FD+     D++ ++++I  Y  HG    A+ ++       +QP+ 
Sbjct: 492 DMYSKCGDLGSAQKCFDR-MPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             ++S++SACSH GLVD+G   F SM   +G++P  +   C+VD+LSR G +E+A    +
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLL 771
            M  +PS  V   LL  CR  GN ELG+  + ++++L P N   +V L+        ++ 
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLA----HSYASMK 666

Query: 772 DHEGVCNVNDGIKTVDLK 789
             +GV  V   +K++ LK
Sbjct: 667 RWDGVGEVWTQMKSLHLK 684



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 269/566 (47%), Gaps = 8/566 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++  G+++D ++  +LI  YSK G+     +VFD M +RN+V WT ++    +
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
            GE D+   MY  M+  G  P+     SV  + +  G  E  +   +H   ++     + 
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPS-----SVTMLGLLSGVLELVHLQCLHACVIQYGFGSDV 181

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S+LN Y K G V  A+ +F  + + DV  WN+++ GYA  G   E L ++  M  +
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D+ TF + +   ++ +   +G+ +HG I+R+ +E    I  +LI MY+K   ++ A
Sbjct: 242 GIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA 301

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           F++FE M  KDVISW  +  G  +N       ++F + + S   P+  T + +L  C +L
Sbjct: 302 FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAEL 361

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
               LG  +    L      +    +SL+ M+ +CG +E + SVFD +S ++I +WN ++
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+  N      L  F  + ++    +  T   +++ C           IH  + K+   
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLG 481

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            C  I ++L+  Y   G L ++ +  +   + D+ SW ++++     G    A+ ++   
Sbjct: 482 PCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDF 541

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  G +P+  I  +IL++C+  G   +  S  H      G    +   + ++D  ++ G 
Sbjct: 542 LHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGR 601

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ A   + + F    + V   L+ A
Sbjct: 602 VEEAYSFYKRMFPKPSMDVLGILLDA 627



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 231/504 (45%), Gaps = 45/504 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  +++ GF +D+ L N+++ +Y KCG       +F+ M  R+++SW  +VS   Q G 
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L++ + MKT+G  P++   GS++           G  +H   L+  +E++  +  S
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  Y K G+V +A R+F  +   DV  W AMI G         A+ V   ML   +   
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  + L  C+ +  F +G  +HG I+R  ++  I   N+L+ MY K   ++ +  VF+
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM+ +D++SWN +  G ++N +  +   LF++   +  RP+ +T   LL+ C  +  L  
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQ 467

Query: 366 GLQLQ------CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           G  +       CL   C  +D     ++L+ M+ +CG +  A   FD +  +++ +W+ +
Sbjct: 468 GKWIHNFVTKSCLG-PCILID-----TALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSI 521

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  +      L+ + +   +G++ N   +  ++  C            H  ++  G 
Sbjct: 522 IAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACS-----------HNGLVDQGL 570

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           S       S+ K +    +L++                  ++  L   G   EA + +  
Sbjct: 571 S----FFHSMTKDFGIEPRLEHR---------------ACIVDLLSRAGRVEEAYSFYKR 611

Query: 540 LVEAGEKPDEYILGTILNSCAAIG 563
           +     KP   +LG +L++C   G
Sbjct: 612 MF---PKPSMDVLGILLDACRTTG 632



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 186/361 (51%), Gaps = 2/361 (0%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           SL  +  ++S++ +G  VHGHI++ G   D  ++ +LI MY KCG      R+F+ M  +
Sbjct: 252 SLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHK 311

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           +++SWT ++S  +QN   DM + ++  M  +  MP+   + SV+  C  +G+   G S+H
Sbjct: 312 DVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
            + L+ RI+ +     S++  YAK G +  +  VF  +S  D+  WNA++ G+A  G+  
Sbjct: 372 GYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLC 431

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +AL + + M       D  T ++ LQ C+ +     G+ IH  + +S +   I I  AL+
Sbjct: 432 KALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALV 491

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K   +  A K F+RM  +D++SW+++  G+  +        ++  F+ +G +PNHV
Sbjct: 492 DMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHV 551

Query: 349 TFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +  +L  C     +D GL     +    G        + ++ +  R G VE A+S +  
Sbjct: 552 IYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKR 611

Query: 408 V 408
           +
Sbjct: 612 M 612



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 1/265 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A  L+    L S  LGT VHG+I++     DI  QN+L+ MY+KCG+      VFD M+
Sbjct: 351 IASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMS 410

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R++VSW  IVS   QNG     L ++ +M+     P+   V S+++ C S+GA   G  
Sbjct: 411 RRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKW 470

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH F  K  +     +  ++++ Y+K GD+ +A++ F  +   D+  W+++I GY   G 
Sbjct: 471 IHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGK 530

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVN 285
           G  AL + S  L  GI  +   +++ L  CS     D G    H +     +E  +    
Sbjct: 531 GETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRA 590

Query: 286 ALIDMYIKSSGMDYAFKVFERMADK 310
            ++D+  ++  ++ A+  ++RM  K
Sbjct: 591 CIVDLLSRAGRVEEAYSFYKRMFPK 615



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 13/181 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I +   L    ++ +   G  +H  + K      I +   L+ MYSKCG  G   +
Sbjct: 446 RPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQK 505

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC----- 155
            FD M +++LVSW+ I++    +G+ +  L+MY D    G  PN     S++  C     
Sbjct: 506 CFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGL 565

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA----ERVFYSISSDDV 211
           V  G S F      F ++ R+E        +++  ++ G V  A    +R+F   S D +
Sbjct: 566 VDQGLSFFHSMTKDFGIEPRLEHR----ACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVL 621

Query: 212 G 212
           G
Sbjct: 622 G 622


>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 748

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 192/728 (26%), Positives = 344/728 (47%), Gaps = 26/728 (3%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  VL  QVH  I+K       ++ N L+++Y +CG       VFD + E+N+ +WT+++
Sbjct: 19  KDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVFDTLVEKNVFNWTIMI 78

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
               +N  F+  +++Y  M+ NG  PNE    +++K C S  A ++G  IH        +
Sbjct: 79  GGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGFQ 138

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +G ++++ YA+ G +  A  VF  +   D+  WN MIG     G G EA ++   M
Sbjct: 139 SDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQM 198

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG   D  T+++ L   +        +++H   +R+ +E  + +  AL+ MY +S  +
Sbjct: 199 QREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESDVRVGTALVHMYARSGSI 258

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-SILLRQ 356
             A  VF++M ++++I+WN++ GG +++    +  SLF +    G  P+ +T+ +IL   
Sbjct: 259 KDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNILNNA 318

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C     L    ++   A   G   +  V ++L++M+ +CG+++ A  VF  +  +++ +W
Sbjct: 319 CASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDDARRVFYGMVDRDVVSW 378

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++ G   +    +    F  +   G   N  T+  ++     +   + V ++H   + 
Sbjct: 379 TVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKASTGALEWVKEVHTHAVN 438

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
               S   + ++LI  Y   G ++N+    +  E  D+ SW AM+  L   GH  EA + 
Sbjct: 439 AELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDIISWNAMIGGLAQNGHGREAFSH 498

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +   G  PD   L +ILN+CA+  A  R K +H   ++ G  +++ V SA++  YAK
Sbjct: 499 FLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESDLRVGSALVHTYAK 558

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG I  AR+ F +   S D+I +N +I   A HG   EA  +F +M+     P   T++S
Sbjct: 559 CGRIDDARLVF-EGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQDVGFVPDAITYLS 617

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQY----GMQPSPDCYGCLVDMLSRNGYLEDAK-HVIE 711
           ++      G V    L +     ++    G    P     LV M ++ G +++AK H   
Sbjct: 618 ILG-----GNVSIEALEWVKEVHRHAVRAGFDTDPRVSSALVHMYTKCGDIDNAKLHFTP 672

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELG--------------EWASEKLLLLLPKNDAAHV 757
            M      T +  LL  CR HG+ E+               + +S   +L LP    +H+
Sbjct: 673 NMLPDLDGTAWGDLLDACRNHGDVEMAVPTAEGGTIGCLYVQGSSSISMLQLPNRTRSHL 732

Query: 758 LLSKRKRQ 765
           L  + K Q
Sbjct: 733 LAVRVKEQ 740



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 233/478 (48%), Gaps = 13/478 (2%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I++D YT+++ LQ      D  + +Q+H  II+SE+E    + N L+ +YI+   +    
Sbjct: 1   ISIDSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTR 60

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ + +K+V +W  + GG++EN +      +++K   +G +PN +TF  +L+ C   +
Sbjct: 61  EVFDTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPM 120

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++     H GF  +  + ++LI+M+ RCG+++ A  VF+ +  ++I TWN ++ 
Sbjct: 121 ALKWGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIG 180

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               +    +    F  +   G   +  T+  ++     +     V ++H   ++ G  S
Sbjct: 181 RLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLES 240

Query: 482 CGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              + ++L+  Y   G + D    F    ER ++ +W +M+  L   G   EA ++F  +
Sbjct: 241 DVRVGTALVHMYARSGSIKDARLVFDKMTER-NIITWNSMIGGLAQHGCGLEAFSLFRQM 299

Query: 541 VEAGEKPDEYILGTIL-NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
              G  PD      IL N+CA+ GA Q  + +H    K+G + +V V +A++  YAKCG 
Sbjct: 300 QREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGS 359

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR  F       DV+ +  +I   A HG   EA  +F +M+     P+  T++S+++
Sbjct: 360 MDDARRVF-YGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILN 418

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVDMLSRNGYLEDAKHVIEIM 713
                G    G L +      + +    D +      L+ M ++ G +E+A+ V + M
Sbjct: 419 -----GKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRM 471


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 212/742 (28%), Positives = 361/742 (48%), Gaps = 13/742 (1%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYS 90
           + F S S    +P  L +  +L + L       QVH + +  GF    + L  +LI  Y+
Sbjct: 25  SSFFSTSLQTSNPPNLLQLCTLCDTLSQT---KQVHAYSLLHGFLPRSVSLCASLILQYA 81

Query: 91  KCGYFGWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
             G+    L +F       R+   W  ++ A    G FD G   Y  M   G  P+E   
Sbjct: 82  SFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTY 140

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             V+KVC        G  +H  A K+  + + FVG ++L FY   G    A +VF  +  
Sbjct: 141 PFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPE 200

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFINALQGCSLVADFDIGR 266
            D   WN +IG  +  G+  EAL     M+    GI  D  T ++ L  C+   D  + R
Sbjct: 201 RDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMAR 260

Query: 267 QIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            +H   ++   +   + + NAL+D+Y K      + KVF+ + +++VISWN +   FS  
Sbjct: 261 IVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFR 320

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                   +F   I  G RPN VT S +L   G+L    LG+++   +L      +  ++
Sbjct: 321 GKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFIS 380

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           +SLI M+ + G+  +A ++F+ +  +NI +WN +++ +  N  + + ++    +   G  
Sbjct: 381 NSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGET 440

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            N  TF  V+  C R     +  +IH  II+ G S   ++ ++L   Y   G L+ +   
Sbjct: 441 PNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNV 500

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            N + R D  S+  ++        + E++ +F  +   G +PD      ++++CA +   
Sbjct: 501 FNISVR-DEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFI 559

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ K IH  +++  F+T ++VA++++D Y +CG I  A   F     + DV  +NT+I+ 
Sbjct: 560 RQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVF-YCIQNKDVASWNTMILG 618

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           Y   G +  A+ +F+ MK   ++    +FV+V+SACSH GL++KG   FK M     ++P
Sbjct: 619 YGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMM-CDLNIEP 677

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
           +   Y C+VD+L R G +E+A  +I  +   P   ++ +LL  CRIHGN ELG WA+E L
Sbjct: 678 THTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHL 737

Query: 746 LLLLPKNDAAHVLLSKRKRQRE 767
             L P++   ++LLS    + E
Sbjct: 738 FELKPQHCGYYILLSNMYAEAE 759


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 186/687 (27%), Positives = 342/687 (49%), Gaps = 17/687 (2%)

Query: 102 FDEMAERNL-VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            DE+  R+  V    ++    + G     L  +   +  G + +   +  V+K C S+  
Sbjct: 55  LDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPD 114

Query: 161 SEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
              G  +HC  +K   ++     G S+++ Y K G V     VF  +   +V  W +++ 
Sbjct: 115 RVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLT 174

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G AH     E + +   M  EGI  + +TF + L   +     D+G+++H   ++     
Sbjct: 175 GCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRS 234

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           S+ + N+L++MY K   ++ A  VF  M  +D++SWNTL  G   N+   +   LFH+  
Sbjct: 235 SVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESR 294

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            +  +    T++ +++ C  L  L L  QL    L  GF    NV ++L   + +CG + 
Sbjct: 295 ATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELA 354

Query: 400 MAHSVFD-NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A ++F      +N+ +W  ++SG   N      +  F  + E  V  N  T+  ++   
Sbjct: 355 DALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML--- 411

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
            ++    +  QIH  +IKT +     + ++L+ SY  FG  +++       E+ D+ +W 
Sbjct: 412 -KASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWS 470

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIK 577
           AM+S     G    A  +F+ +   G KP+E+ + +++++CA   A   + +  H   IK
Sbjct: 471 AMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIK 530

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
             ++  + V+SA++  Y++ G+I  A++ F++  +  D++ +N++I  YA HG   +A+E
Sbjct: 531 YRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTD-RDLVSWNSMISGYAQHGYSMKAIE 589

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F +M+ + +Q    TF++V+  C+H GLV +G   F SM   + + P+ + Y C+VD+ 
Sbjct: 590 TFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLY 649

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           SR G L++   +I  MPF     V+R+LL  CR+H N ELG+++++KLL L P + + +V
Sbjct: 650 SRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYV 709

Query: 758 LLSK--------RKRQREGNLLDHEGV 776
           LLS         ++R     L+D+  V
Sbjct: 710 LLSNIYAAAGKWKERDEVRKLMDYRKV 736



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 149/625 (23%), Positives = 278/625 (44%), Gaps = 18/625 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRV 101
           D   L+  L    ++  RVLG Q+H   VK G    ++    +L+ MY KCG    G+ V
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F+ M ++N+V+WT +++           + ++  M+  G  PN F   SV+    S GA 
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  +H  ++K     + FV  S++N YAK G V  A+ VF  + + D+  WN ++ G 
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                  EAL +          M + T+   ++ C+ +    + RQ+H  +++     + 
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 282 SIVNALIDMYIKSSGMDYAFKVFE-RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +++ AL D Y K   +  A  +F      ++V+SW  +  G  +N +      LF +   
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               PN  T+S +L+    +L   +  Q+    +   +    +V ++L+  + + G+ E 
Sbjct: 398 DRVMPNEFTYSAMLKASLSILPPQIHAQV----IKTNYQHIPSVGTALLASYSKFGSTED 453

Query: 401 AHSVFDNVSYKNITTWNELLS--GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A S+F  +  K++  W+ +LS      +C  A  L  F  +   G++ N  T   V++ C
Sbjct: 454 ALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYL--FNKMAIQGIKPNEFTISSVIDAC 511

Query: 459 -CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMAS 516
            C S       Q H   IK  +     + S+L+  Y   G +D++   F    +R D+ S
Sbjct: 512 ACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVS 570

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFV 575
           W +M+S     G++ +A+  F  +  +G + D      ++  C   G   +  +     V
Sbjct: 571 WNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMV 630

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
                N  +   + ++D Y++ G + +   +  D  F +   +V+ TL+ A   H  V  
Sbjct: 631 RDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAG-AMVWRTLLGACRVHKNVE- 688

Query: 635 AMEIFDKMKLANLQPSQATFVSVMS 659
            +  F   KL +L+P  ++   ++S
Sbjct: 689 -LGKFSADKLLSLEPHDSSTYVLLS 712


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 294/547 (53%), Gaps = 1/547 (0%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W ++I  +   G   +AL + SSML  G   D++   +A++ C+ + D   GRQ+H   +
Sbjct: 103 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 162

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           +SE    + + NAL+ MY K+  +D  F +FER+ DKD+ISW ++  GF++     +   
Sbjct: 163 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 222

Query: 334 LFHKFILSGSR-PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
           +F + I+ GS  PN   F    R CG +   + G Q+  L++      +  V  SL  M+
Sbjct: 223 VFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMY 282

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            RC  ++ A   F  +   ++ +WN +++ Y      ++ L  F  + +SG+  +G T  
Sbjct: 283 ARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVR 342

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            ++  C   +       IH  ++K G      +C+SL+  Y     L ++ +  +  +  
Sbjct: 343 GLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ 402

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D+ +W ++++A     H  E + +F  L ++    D   L  +L++ A +G ++  K +H
Sbjct: 403 DVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVH 462

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            +  K G   +  +++ +ID YAKCG +  A   F+   N+ DV  +++LI+ YA  G  
Sbjct: 463 AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYA 522

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
            EA ++F +M+   ++P+  TF+ V++ACS  G V++GC  +  M+ +YG+ P+ +   C
Sbjct: 523 KEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSC 582

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +VD+L+R G L +A + I+ MPF+P   ++++LL+  ++H + E+G+ A+E +L + P +
Sbjct: 583 IVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSH 642

Query: 753 DAAHVLL 759
            AA+VLL
Sbjct: 643 SAAYVLL 649



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 167/653 (25%), Positives = 292/653 (44%), Gaps = 35/653 (5%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIV-------KLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           A  +S    L+S   G +VH H+V             +  L N+LI MY           
Sbjct: 48  AALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYG---------- 97

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
                  RN VSW  +++A +QNG     L ++  M  +G   ++FA+GS ++ C  +G 
Sbjct: 98  -------RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGD 150

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  +H  ALK     +  V  +++  Y+K G V     +F  I   D+  W ++I G
Sbjct: 151 VGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 210

Query: 221 YAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +A  G+  EAL V   M+ EG    +++ F +A + C  V  ++ G QIHGL I+  ++ 
Sbjct: 211 FAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDR 270

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  +L DMY +   +D A   F R+   D++SWN++   +S      +   LF +  
Sbjct: 271 DLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMR 330

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG RP+ +T   LL  C     L  G  +    +  G   + +V +SL+ M+ RC  + 
Sbjct: 331 DSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLS 390

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF  +  +++ TWN +L+    +    +VLK F  + +S   ++  +   V+    
Sbjct: 391 SAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASA 450

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWG 518
                +MV Q+H    K G      + ++LI +Y   G LD++   F       D+ SW 
Sbjct: 451 ELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWS 510

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IK 577
           +++      G+  EA  +F  +   G +P+      +L +C+ +G        +  +  +
Sbjct: 511 SLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPE 570

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G        S ++D  A+ G +  A    DQ     D+I++ TL+ A   H      ME
Sbjct: 571 YGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH----NDME 626

Query: 638 IFDKMK--LANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +  +    + N+ PS  A +V + +  +  G  ++   L K+M +  G++ SP
Sbjct: 627 MGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTS-GVKKSP 678



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 1/118 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   LS S  L    +  QVH +  K G  +D  L N LI  Y+KCG     +R+F
Sbjct: 438 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 497

Query: 103 DEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + M   R++ SW+ ++    Q G       ++  M++ G  PN      V+  C  +G
Sbjct: 498 EIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVG 555


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 187/647 (28%), Positives = 334/647 (51%), Gaps = 8/647 (1%)

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           I NG     +     M   G  P+       +K C+   + + G  +H    +  ++ + 
Sbjct: 42  INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDS 101

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
               S+++ Y+K G    A  +F  + SS D+  W+AM+  +A+   GF AL     M+ 
Sbjct: 102 VTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIE 161

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSG-M 297
            G   ++Y F  A + CS      +G  I G +I++  ++  + +   LIDM++K  G +
Sbjct: 162 NGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDL 221

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             AFKVFE+M +++ ++W  +     +    G+   LF   I SG  P+  T S ++  C
Sbjct: 222 VSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISAC 281

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNIT 414
             +  L LG QL   A+  G   +  V   LI M+ +C   G++  A  +FD +   N+ 
Sbjct: 282 ANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVF 341

Query: 415 TWNELLSGYCFNC-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
           +W  +++GY      D + L  F  +  + V  N  TF   ++ C      ++  Q+   
Sbjct: 342 SWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTH 401

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K GFSS   + +SLI  Y   G++D++ +  +     ++ S+  ++ A     ++ EA
Sbjct: 402 AVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEA 461

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F+ + + G     +   ++L+  A+IG   + + IH  VIK G      V +A+I  
Sbjct: 462 LELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISM 521

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y++CG+I+ A   F+   + N VI + ++I  +A HG  ++A+E+F KM    ++P++ T
Sbjct: 522 YSRCGNIESAFQVFEDMEDRN-VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVT 580

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +++V+SACSH GLV++G   FKSM +++G+ P  + Y C+VD+L R+G L +A   I  M
Sbjct: 581 YIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSM 640

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P++    V+R+ L  CR+HGN ELG+ A++ ++   P + AA++LLS
Sbjct: 641 PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLS 687



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 283/597 (47%), Gaps = 10/597 (1%)

Query: 44  PIFLAKSLSLSENLKSRV--LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           P     SL L + +++R   +GT VH  + +     D    N+LI++YSKCG +     +
Sbjct: 64  PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123

Query: 102 FDEM-AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           F  M + R+L+SW+ +VS    N      L  +VDM  NG+ PNE+   +  + C +   
Sbjct: 124 FRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEF 183

Query: 161 SEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMI 218
              G SI  F +K   ++ +  VGC +++ + K  GD+ +A +VF  +   +   W  MI
Sbjct: 184 VSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMI 243

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
                 GY  EA+++   M+F G   D++T    +  C+ +    +G+Q+H   IR  + 
Sbjct: 244 TRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLT 303

Query: 279 CSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SL 334
               +   LI+MY K S    M  A K+F+++ D +V SW  +  G+ +     + A  L
Sbjct: 304 LDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDL 363

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F   IL+   PNH TFS  L+ C  L  L +G Q+   A+  GF     V +SLI M+ R
Sbjct: 364 FRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYAR 423

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A   FD +  KN+ ++N ++  Y  N    + L+ F  I + G+  +  TF  +
Sbjct: 424 SGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASL 483

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +             QIH  +IK+G      +C++LI  Y   G ++++F+     E  ++
Sbjct: 484 LSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNV 543

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHP 573
            SW ++++     G   +A+ +FH ++E G +P+E     +L++C+ +G      K    
Sbjct: 544 ISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKS 603

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
              + G    +   + ++D   + G +  A    +      D +V+ T + A   HG
Sbjct: 604 MYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHG 660



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 257/531 (48%), Gaps = 35/531 (6%)

Query: 62  LGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
           +G  + G ++K G+  +D+ +   LI M+ K  G      +VF++M ERN V+WTL+++ 
Sbjct: 186 VGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            +Q G     + +++DM  +G+ P+ F +  V+  C +M     G  +H  A++  +  +
Sbjct: 246 LMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305

Query: 180 PFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGYAH-CGYGFEALNVVS 235
             VGC ++N YAK    G + AA ++F  I   +V  W AMI GY    GY  EAL++  
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR---SEVECSISIVNALIDMYI 292
            M+   +  + +TF + L+ C+ +A   IG Q+    ++   S V C   + N+LI MY 
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNC---VANSLISMYA 422

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           +S  +D A K F+ + +K++IS+NT+   +++N N  +   LF++    G   +  TF+ 
Sbjct: 423 RSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFAS 482

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           LL     +  +  G Q+    +  G    ++V ++LI M+ RCG +E A  VF+++  +N
Sbjct: 483 LLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRN 542

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVG 468
           + +W  +++G+  +      L+ F  + E GV  N  T+  V+  C      +E  +   
Sbjct: 543 VISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFK 602

Query: 469 QI---HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSAL 524
            +   HG I +    +C  I   L +S    G L  + +F N    + D   W   + A 
Sbjct: 603 SMYTEHGVIPRMEHYAC--IVDILGRS----GSLSEAIQFINSMPYKADALVWRTFLGAC 656

Query: 525 VHQGH----NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
              G+     H A  I     +    P  YIL  + N  A+I  +    +I
Sbjct: 657 RVHGNLELGKHAAKMIIE---QEPHDPAAYIL--LSNLYASISKWDEVSNI 702



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 195/388 (50%), Gaps = 7/388 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGL 99
           D   L+  +S   N++  +LG Q+H   ++ G T D  +   LI MY+KC   G      
Sbjct: 270 DRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAAR 329

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           ++FD++ + N+ SWT +++  +Q G +D   L ++  M     +PN F   S +K C ++
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A   G  +   A+K+       V  S+++ YA+ G +  A + F  +   ++  +N +I
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      EAL + + +  +G+    +TF + L G + +     G QIH  +I+S ++
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLK 509

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            + S+ NALI MY +   ++ AF+VFE M D++VISW ++  GF+++    Q   LFHK 
Sbjct: 510 LNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKM 569

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +  G RPN VT+  +L  C  +  ++ G +  + +    G +      + ++ +  R G+
Sbjct: 570 LEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGS 629

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYC 424
           +  A    +++ YK +   W   L G C
Sbjct: 630 LSEAIQFINSMPYKADALVWRTFL-GAC 656


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 171/577 (29%), Positives = 302/577 (52%), Gaps = 5/577 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ + K   +  A RVF  +       ++ M+ GYA      +A+     M  + +   
Sbjct: 82  LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPV 141

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            Y F   LQ      D   GR+IHG++I +  + ++  + A++++Y K   ++ A+K+FE
Sbjct: 142 VYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFE 201

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM  +D++SWNT+  G+++N    +   +  +   +G +P+ +T   +L     L  L +
Sbjct: 202 RMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +   A   GF    NV ++++  + +CG+V  A  VF  +S +N+ +WN ++ GY  
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ 321

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI--IKTGFSSCG 483
           N    +   TF  + + GVE    +    +  C    + +    +H  +   K GF    
Sbjct: 322 NGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS- 380

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + +SLI  Y    ++D +       +   + +W AM+      G  +EA+ +F  +   
Sbjct: 381 -VMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSH 439

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             KPD + L +++ + A +   ++ K IH   I+   +  V+V +A+ID +AKCG I+ A
Sbjct: 440 DIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTA 499

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD       VI +N +I  Y  +G   EA+++F++M+  +++P++ TF+SV++ACSH
Sbjct: 500 RKLFDL-MQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSH 558

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F+SM   YG++P+ D YG +VD+L R G L+DA   I+ MP +P  TV  
Sbjct: 559 SGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLG 618

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++L  CRIH N ELGE  +++L  L P +   HVLL+
Sbjct: 619 AMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLA 655



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/637 (24%), Positives = 291/637 (45%), Gaps = 25/637 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   I+K GF N+   Q  LI+++ K        RVF+ +  +  V +  ++    +N 
Sbjct: 62  QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNS 121

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++ Y  M+ +  MP  +    ++++         G  IH   +    + N F   
Sbjct: 122 TLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMT 181

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +V+N YAK   +  A ++F  +   D+  WN ++ GYA  G+   A+ VV  M   G   
Sbjct: 182 AVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKP 241

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T ++ L   + +    IGR IHG   R+  E  +++  A++D Y K   +  A  VF
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF 301

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M+ ++V+SWNT+  G+++N    +  + F K +  G  P +V+    L  C  L DL+
Sbjct: 302 KGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLE 361

Query: 365 LGLQLQCLALHCGFLDEE------NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            G  +  L      LDE+      +V +SLI M+ +C  V++A SVF N+ +K + TWN 
Sbjct: 362 RGRYVHRL------LDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNA 415

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ GY  N C  + L  FC +    ++ +  T   V+         +    IHG  I+T 
Sbjct: 416 MILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTL 475

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                ++C++LI ++   G +  + +  +  +   + +W AM+      GH  EA+ +F+
Sbjct: 476 MDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFN 535

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +     KP+E    +++ +C+  G  +  + ++ F        E Y     +D Y    
Sbjct: 536 EMQNGSVKPNEITFLSVIAACSHSGLVE--EGMYYFESM----KENYGLEPTMDHYGAMV 589

Query: 599 DIKGARMAFDQSFN-SNDVIVYNTLIMAYAHHGL--VSEAMEIFDKM--KLANLQPSQAT 653
           D+ G     D ++    D+ V   + +  A  G   + + +E+ +K   +L +L P    
Sbjct: 590 DLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGG 649

Query: 654 F-VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           + V + +  +   + DK   +  +M+ + G+Q +P C
Sbjct: 650 YHVLLANMYASASMWDKVARVRTAMEKK-GIQKTPGC 685



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 242/513 (47%), Gaps = 41/513 (7%)

Query: 51  LSLS-ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           L LS ENL  R  G ++HG ++  GF +++F    ++ +Y+KC       ++F+ M +R+
Sbjct: 149 LQLSGENLDLR-RGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRD 207

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           LVSW  +V+   QNG     +++ + M+  G  P+   + SV+     + A   G SIH 
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHG 267

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
           +A +   E    V  ++L+ Y K G V +A  VF  +SS +V  WN MI GYA  G   E
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           A      ML EG+     + + AL  C+ + D + GR +H L+   ++   +S++N+LI 
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLIS 387

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +D A  VF  +  K V++WN +  G+++N    +  +LF +      +P+  T
Sbjct: 388 MYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFT 447

Query: 350 FSILLRQCGKLLDLDLGLQLQCL-ALHCGFLDEEN--VTSSLIYMFCRCGAVEMAHSVFD 406
              L+     L DL +  Q + +  L    L ++N  V ++LI    +CGA++ A  +FD
Sbjct: 448 ---LVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFD 504

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  +++ TWN ++ GY  N    + L  F  +    V+ N  TF  V+  C        
Sbjct: 505 LMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS------- 557

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
               H  +++ G     Y   S+ ++Y              G E   M  +GAM+  L  
Sbjct: 558 ----HSGLVEEGM----YYFESMKENY--------------GLEP-TMDHYGAMVDLLGR 594

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            G   +A      +     KP   +LG +L +C
Sbjct: 595 AGRLDDAWKFIQDM---PVKPGITVLGAMLGAC 624



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 158/320 (49%), Gaps = 6/320 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D I L   L    +LK+  +G  +HG+  + GF   + +   ++  Y KCG       
Sbjct: 240 KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF  M+ RN+VSW  ++    QNGE +     ++ M   G  P   ++   +  C ++G 
Sbjct: 300 VFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGD 359

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +H    + +I  +  V  S+++ Y+K   V  A  VF ++    V  WNAMI G
Sbjct: 360 LERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILG 419

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ---IHGLIIRSEV 277
           YA  G   EALN+   M    I  D +T ++ +   + +AD  + RQ   IHGL IR+ +
Sbjct: 420 YAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVI---TALADLSVTRQAKWIHGLAIRTLM 476

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ +  ALID + K   +  A K+F+ M ++ VI+WN +  G+  N +  +   LF++
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536

Query: 338 FILSGSRPNHVTFSILLRQC 357
                 +PN +TF  ++  C
Sbjct: 537 MQNGSVKPNEITFLSVIAAC 556



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 175/339 (51%), Gaps = 7/339 (2%)

Query: 345 PNHV---TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           P+HV     +ILL  C  L +L    Q+  L +  GF +E    + LI +FC+  ++  A
Sbjct: 39  PSHVYRHPSAILLELCTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEA 95

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VF+ V +K    ++ +L GY  N    D ++ +  +    V      F Y+++    +
Sbjct: 96  ARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGEN 155

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            + +   +IHG +I  GF S  +  ++++  Y    Q++++++      + D+ SW  ++
Sbjct: 156 LDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVV 215

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +     G    AV +   + EAG+KPD   L ++L + A + A +  +SIH +  + GF 
Sbjct: 216 AGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFE 275

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             V VA+A++D Y KCG ++ AR+ F +  +S +V+ +NT+I  YA +G   EA   F K
Sbjct: 276 YMVNVATAMLDTYFKCGSVRSARLVF-KGMSSRNVVSWNTMIDGYAQNGESEEAFATFLK 334

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           M    ++P+  + +  + AC++ G +++G  + + +D +
Sbjct: 335 MLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEK 373



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)

Query: 32  NQFC--SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMY 89
           N FC      ++ D   L   ++   +L        +HG  ++     ++F+   LI  +
Sbjct: 431 NLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTH 490

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           +KCG      ++FD M ER++++W  ++     NG     L ++ +M+     PNE    
Sbjct: 491 AKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFL 550

Query: 150 SVMKVCVSMGASEFG 164
           SV+  C   G  E G
Sbjct: 551 SVIAACSHSGLVEEG 565


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 202/721 (28%), Positives = 363/721 (50%), Gaps = 30/721 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
            G Q+HG + K  + ND+   N LI+MY    G   +  R FD +  RNLVS   ++S  
Sbjct: 194 FGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVY 253

Query: 121 IQNGE----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            Q G+    FD+   M  ++  +G  PNE+  GS++    S+  S     +    L  R+
Sbjct: 254 CQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL---VLLEQLLTRV 310

Query: 177 EKNPF-----VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           EK+ F     VG ++++ +AK G +  A+ +F  +S  +V   N +I G      G EA+
Sbjct: 311 EKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAV 370

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDI-------GRQIHGLIIRSEV-ECSISI 283
            +   M  + + ++  +++  L   +   +F +       G ++H  +IRS +    I+I
Sbjct: 371 ELFMEMK-DSVELNPNSYMIIL---TAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAI 426

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            N LI+MY K   ++ A  VF  M +KD ++WN++  G  +NK   +    F +   +  
Sbjct: 427 GNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTEL 486

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P++ T    L  C  L  + +G QL C  L  G   + +V+++L+ ++  CG V+    
Sbjct: 487 YPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQK 546

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDA-DVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            F  +   +  +WN L+     +     + +++F  +  +G + N  TF  ++       
Sbjct: 547 AFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLS 606

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMM 521
             ++  QIH  ++K   ++   I ++L+  Y   G +      FS  ++R D  SW +M+
Sbjct: 607 LHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMI 666

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S  +H     +A+ +   +++ G++ D +   T+L++CA +   +R   +H   ++    
Sbjct: 667 SGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLE 726

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           +++ + SA++D YAKCG I  A   F+    + ++  +N++I  YA HG  ++++++F +
Sbjct: 727 SDIVIGSALVDMYAKCGRIDYASRFFEM-MPARNLYSWNSMISGYARHGHGTKSLDLFAQ 785

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           MKL    P   TFV V+SACSH GLV++G   F SM   YG+ P  + + C+VD+L R G
Sbjct: 786 MKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVG 845

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLL 759
            L   +  +  MP +P+  ++R++L   CR +G N  LG  A+E LL + P N   ++LL
Sbjct: 846 ELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILL 905

Query: 760 S 760
           S
Sbjct: 906 S 906



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 189/709 (26%), Positives = 342/709 (48%), Gaps = 32/709 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  + K GF ND+FL N LI +Y++ G  G G +VFDEM  RNLVSW+ ++S   +N 
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--ASEFGYSIHCFALKIRIEKNPFV 182
             +   +++  M ++GFMPN +A GSV++ C   G    +FG  IH    K +   +   
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 183 GCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM---- 237
              +++ Y   LG V  A R F SI   ++   N+MI  Y   G    A ++ S+M    
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 238 LFEGITMDKYTFINALQG-CSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           + +G+  ++YTF + +   CSL  +   +  Q+   + +S     + + +AL+  + K+ 
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAG 333

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILL 354
            + YA  +F++M+ ++V+S N L  G    K   +   LF +   S    PN  ++ I+L
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMIIL 391

Query: 355 RQCGKLLDLD----LGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVS 409
               +   L+     G ++    +  G L+ +  + + LI M+ +CGA+  A  VF  + 
Sbjct: 392 TAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMD 451

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            K+  TWN +++G   N    + +KTF  +  + +  +  T    + +C       +  Q
Sbjct: 452 NKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQ 511

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H   +K G      + ++L+  Y   G +    +  +     D  SW +++ AL     
Sbjct: 512 LHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEP 571

Query: 530 NH-EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           +  EAV  F  ++ AG  P+     TIL + +++  ++  K IH  V+K     +  + +
Sbjct: 572 SMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIEN 631

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A++  Y KCGD+      F +  +  D + +N++I  Y H+ L+ +AM++   M     +
Sbjct: 632 ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQR 691

Query: 649 PSQATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
               TF +V+SAC+      +G+   GC +   ++S   +  +      LVDM ++ G +
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA------LVDMYAKCGRI 745

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN--KELGEWASEKLLLLLP 750
           + A    E+MP + +   + S++SG   HG+  K L  +A  KL   LP
Sbjct: 746 DYASRFFEMMPAR-NLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLP 793



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/573 (22%), Positives = 265/573 (46%), Gaps = 9/573 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           VL  Q+   + K GF +D+++ + L++ ++K G  G+   +F +M+ RN+VS   ++   
Sbjct: 301 VLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGL 360

Query: 121 IQNGEFDMGLKMYVDMKTN-GFMPNEFAV--GSVMKVCVSMGASEFGYSIHCFALKI-RI 176
           ++    +  ++++++MK +    PN + +   +  +  V       G  +H F ++   +
Sbjct: 361 VRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL 420

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
                +G  ++N YAK G +  A  VF  + + D   WN+MI G        EA+     
Sbjct: 421 NAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M    +    +T I+AL  C+ +    +G Q+H   ++  ++  +S+ NAL+ +Y +   
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL--FHKFILSGSRPNHVTFSILL 354
           +    K F  M D D +SWN+L G  ++++ P    ++  F   + +G  PN VTF  +L
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGALADSE-PSMLEAVESFLVMMRAGWDPNRVTFITIL 599

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNI 413
                L   +LG Q+  L L      +  + ++L+  + +CG +    ++F  +S  ++ 
Sbjct: 600 AAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDE 659

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN ++SGY  N      +     + + G  ++G TF  V+  C      +   ++HG 
Sbjct: 660 VSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGC 719

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            ++    S   I S+L+  Y   G++D +  F       ++ SW +M+S     GH  ++
Sbjct: 720 SVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKS 779

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVID 592
           + +F  +   G  PD      +L++C+  G      S    + ++ G    +   S ++D
Sbjct: 780 LDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVD 839

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
              + G++       +Q     +V+++ T++ A
Sbjct: 840 LLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGA 872



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 10/186 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS    + +   G +VHG  V+    +DI + + L+ MY+KCG   +  R
Sbjct: 691 RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASR 750

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC----- 155
            F+ M  RNL SW  ++S   ++G     L ++  MK  G +P+      V+  C     
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
           V+ G S F      + L  R+E      C V +   ++G++   E     +    +V  W
Sbjct: 811 VNEGFSHFDSMSEIYGLAPRMEH---FSCMV-DLLGRVGELNKMEDFLNQMPVKPNVLIW 866

Query: 215 NAMIGG 220
             ++G 
Sbjct: 867 RTVLGA 872



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           +++  + H+ V+  EK  E +      SC +  A    + +H  + K GF  ++++ + +
Sbjct: 60  YKSSQLHHNPVQHDEKI-ESLAQRYRYSCGSKDA----EELHLQLFKNGFVNDLFLCNTL 114

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I+ YA+ GD+   R  FD+     +++ ++ LI  Y  + + +EA E+F KM      P+
Sbjct: 115 INIYARVGDLGSGRKVFDE-MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPN 173

Query: 651 QATFVSVMSACSHKG 665
              F SV+ AC   G
Sbjct: 174 HYAFGSVIRACQECG 188


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 202/714 (28%), Positives = 358/714 (50%), Gaps = 18/714 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
             QVHG + K  + ++  + N LI+MY  C  G      RVFD    R+L++W  ++S  
Sbjct: 186 AVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVY 245

Query: 121 IQNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVCVSMGASEFGY-SIHCFALKIR 175
            + G+      ++ DM+         P E   GS++        S      +  + LK  
Sbjct: 246 AKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSG 305

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV-V 234
              + +VG ++++ +A+ G    A+ +F S+   +    N +I G     +  EA+ + V
Sbjct: 306 CSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFV 365

Query: 235 SSMLFEGITMDKYT-FINALQGCSLVAD-FDIGRQIHGLIIRSEV-ECSISIVNALIDMY 291
            +     +  D Y   ++AL   S+  +   IGR +HG ++R+ + +  I++ N L++MY
Sbjct: 366 GTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMY 425

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ A K+F+ M   D ISWNT+     +N N  +    +     S   P++    
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
             L  C  L  L  G Q+ C A+  G   + +V++ L+ M+  CGA+     VF++++  
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH 545

Query: 412 NITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +  +WN ++     +    ++++K F N+   G+  N  TF  ++         ++  Q+
Sbjct: 546 DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSALVHQGH 529
           H A++K G      + ++LI  Y   G + +    F+N ++R D  SW +M+S  ++ G+
Sbjct: 606 HAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGN 665

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             EA+     ++ +G+  D      ILN+CA++ A +R   +H F I+    ++V V SA
Sbjct: 666 LQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESA 725

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+KCG +  A   F+     N+   +N++I  YA HGL  +A+EIF++M  +   P
Sbjct: 726 LVDMYSKCGRVDYASKLFNSMTQRNE-FSWNSMISGYARHGLGRKAIEIFEEMLRSRESP 784

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFVSV+SACSH GLV++G   F+ M   +G+ P  + Y C++D+L R G ++  K  
Sbjct: 785 DHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGILPQIEHYSCVIDLLGRAGKIDKIKEY 843

Query: 710 IEIMPFQPSPTVYRSLLSGCRIH---GNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I+ MP +P+  ++R++L  CR      N +LG  AS  LL + P+N   +VL S
Sbjct: 844 IQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLAS 897



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 202/400 (50%), Gaps = 3/400 (0%)

Query: 62  LGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +G  VHGH+++ G T+  I + N L+ MY+KCG      ++F  M   + +SW  I+SA 
Sbjct: 397 IGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISAL 456

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG  +  +  Y  M+ +   P+ FA+ S +  C  +     G  +HC A+K  ++ + 
Sbjct: 457 DQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDT 516

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVSSMLF 239
            V   ++  Y + G ++   +VF S++  D   WN M+G  A       E + V ++M+ 
Sbjct: 517 SVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMR 576

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  +K TFIN L   S ++  ++G+Q+H  +++  V     + NALI  Y KS  M  
Sbjct: 577 GGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGS 636

Query: 300 AFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
              +F  M+D+ D ISWN++  G+  N N  +        I SG   +  TFSI+L  C 
Sbjct: 637 CEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACA 696

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +  L+ G++L    +      +  V S+L+ M+ +CG V+ A  +F++++ +N  +WN 
Sbjct: 697 SVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNS 756

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++SGY  +      ++ F  +  S    +  TF  V+  C
Sbjct: 757 MISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSAC 796



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 155/690 (22%), Positives = 300/690 (43%), Gaps = 29/690 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  ++K G  +D+FL N+L+  Y+K        +VFDEM ERN VSWT +VS  + +G 
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGI 142

Query: 126 FDMGLKMYVDMKTN---GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE--KNP 180
            +   +++  M      G  P  F  G++++ C   G    G+++    L  + E   N 
Sbjct: 143 AEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNT 202

Query: 181 FVGCSVLNFYAK--LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
            V  ++++ Y    +G    A+RVF      D+  WNA++  YA  G       +   M 
Sbjct: 203 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQ 262

Query: 239 FEG----ITMDKYTFINALQ-GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
                  +   ++TF + +           +  Q+   +++S     + + +AL+  + +
Sbjct: 263 RGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFAR 322

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP----NHVT 349
               D A  +F  +  K+ ++ N L  G        +   +F      G+R     N  T
Sbjct: 323 HGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIF-----VGTRNTVDVNADT 377

Query: 350 FSILLRQCGKLLDLDLGLQLQCLA----LHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSV 404
           + +LL    +    + GL++  +     L  G  D +  V++ L+ M+ +CGA+E A  +
Sbjct: 378 YVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKI 437

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +   +  +WN ++S    N    + +  +  + +S +  +       + +C   +  
Sbjct: 438 FQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLL 497

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               Q+H   +K G      + + L+K Y   G + + ++  N     D  SW  MM  +
Sbjct: 498 TAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVM 557

Query: 525 V-HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              Q    E V +F++++  G  P++     +L + + +   +  K +H  V+K G   +
Sbjct: 558 ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED 617

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             V +A+I  YAK GD+      F    +  D I +N++I  Y ++G + EAM+    M 
Sbjct: 618 NVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMI 677

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            +       TF  +++AC+    +++G +   +   +  ++        LVDM S+ G +
Sbjct: 678 HSGQIMDCCTFSIILNACASVAALERG-MELHAFGIRSHLESDVVVESALVDMYSKCGRV 736

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + A  +   M  Q +   + S++SG   HG
Sbjct: 737 DYASKLFNSMT-QRNEFSWNSMISGYARHG 765



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 184/377 (48%), Gaps = 3/377 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  SLS    LK    G QVH   VK G   D  + N L+ MY +CG      +VF+ MA
Sbjct: 484 LISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMA 543

Query: 107 ERNLVSW-TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           E + VSW T++   A         +K++ +M   G +PN+    +++     +   E G 
Sbjct: 544 EHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGK 603

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHC 224
            +H   +K  + ++  V  ++++ YAK GD+ + E +F ++S   D   WN+MI GY + 
Sbjct: 604 QVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYN 663

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EA++ V  M+  G  MD  TF   L  C+ VA  + G ++H   IRS +E  + + 
Sbjct: 664 GNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVE 723

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +AL+DMY K   +DYA K+F  M  ++  SWN++  G++ +    +   +F + + S   
Sbjct: 724 SALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRES 783

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+HVTF  +L  C     ++ GL+   +    G L +    S +I +  R G ++     
Sbjct: 784 PDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEY 843

Query: 405 FDNVSYK-NITTWNELL 420
              +  + N   W  +L
Sbjct: 844 IQRMPIEPNALIWRTVL 860



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 270/587 (45%), Gaps = 21/587 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H   +K  +  + F+   ++N YAK   +AAA +VF  +   +   W  ++ GY   G
Sbjct: 82  NLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHG 141

Query: 226 YGFEALNVVSSMLFE---GITMDKYTFINALQGCSLVADFDIG--RQIHGLIIRSEVECS 280
              EA  V  +ML E   G     +TF   L+ C       +G   Q+HGL+ ++E   +
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASN 201

Query: 281 ISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ NALI MY   +      A +VF+    +D+I+WN L   +++  +   T +LF   
Sbjct: 202 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM 261

Query: 339 ILSGS----RPNHVTFSILLRQCGKLLDLDLGL-QLQCLALHCGFLDEENVTSSLIYMFC 393
               S    RP   TF  L+            L Q+    L  G   +  V S+L+  F 
Sbjct: 262 QRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFA 321

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           R G  + A  +F ++  KN  T N L+ G        + +K F     + V+VN  T+  
Sbjct: 322 RHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGT-RNTVDVNADTYVV 380

Query: 454 VVETCCR---SENQQMVGQ-IHGAIIKTGFSSCGYICSS-LIKSYVNFGQLDNSFEFSNG 508
           ++        SE    +G+ +HG +++TG +      S+ L+  Y   G ++++ +    
Sbjct: 381 LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQL 440

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            E  D  SW  ++SAL   G+  EAV  +  + ++   P  + L + L+SCA +      
Sbjct: 441 MEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAG 500

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA- 627
           + +H   +K G + +  V++ ++  Y +CG +      F+ S   +D + +NT++   A 
Sbjct: 501 QQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFN-SMAEHDEVSWNTMMGVMAS 559

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
               +SE +++F+ M    L P++ TF+++++A S   +++ G  +  ++  ++G+    
Sbjct: 560 SQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAV-MKHGVMEDN 618

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
                L+   +++G +   +H+   M  +     + S++SG   +GN
Sbjct: 619 VVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGN 665



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/429 (23%), Positives = 196/429 (45%), Gaps = 23/429 (5%)

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D +    +H  +I+  +   + + N L++ Y K + +  A +VF+ M +++ +SW  L  
Sbjct: 76  DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135

Query: 321 GFSENKNPGQTASLFH---KFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALH 375
           G+  +    +   +F    + + +G RP   TF  LLR C  G    L   +Q+  L   
Sbjct: 136 GYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSK 195

Query: 376 CGFLDEENVTSSLIYMF--CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
             +     V ++LI M+  C  G   +A  VFD    +++ TWN L+S Y       DV 
Sbjct: 196 TEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKK---GDVA 252

Query: 434 KTFC-----NIWESGVEVNGCTFFY---VVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
            TF         +S +++      +   +      S +  ++ Q+   ++K+G SS  Y+
Sbjct: 253 STFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYV 312

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF---HSLVE 542
            S+L+ ++   G  D + +     ++ +  +   ++  LV Q  + EAV IF    + V+
Sbjct: 313 GSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVD 372

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIK 601
                   +L  +     +    +  + +H  +++ G  + ++ V++ +++ YAKCG I+
Sbjct: 373 VNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F Q   + D I +NT+I A   +G   EA+  +  M+ + + PS    +S +S+C
Sbjct: 433 SASKIF-QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSC 491

Query: 662 SHKGLVDKG 670
           +   L+  G
Sbjct: 492 AGLKLLTAG 500


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 176/600 (29%), Positives = 321/600 (53%), Gaps = 4/600 (0%)

Query: 164 GYSIHCFALKIRIEKN-PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           G ++H   +K+    +  ++  S++NFYAK   +  A+ VF  I + DV  WN +I GY+
Sbjct: 26  GRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLINGYS 85

Query: 223 HCGYGFEA--LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
             G    +  + +   M  + I  + +TF       S ++    G+Q H + I+      
Sbjct: 86  QQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYD 145

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + ++L++MY K+  +  A +VF+RM +++ ++W T+  G++  +  G+   +F     
Sbjct: 146 VFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRR 205

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
                N   F+ +L        +D G Q+ CLA+  G L   ++ ++L+ M+ +CG+++ 
Sbjct: 206 EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDD 265

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  VF+  + KN  TW+ +++GY  +      LK F  +  +G+  +  T   V+  C  
Sbjct: 266 SLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSD 325

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           +   +   Q+H  ++K GF S  YI ++L+  Y   G  +++ +  N  ++ D+  W +M
Sbjct: 326 ACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSM 385

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++  V  G N +A++++  +   G  P+E  + ++L +C+ + A+ + + IH   IK G 
Sbjct: 386 IAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGL 445

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             EV + SA+   YAKCG+++   + F +     D+I +N +I   + +G   EA+E+F+
Sbjct: 446 GLEVTIGSALSTMYAKCGNLEEGNIVF-RRMPERDIISWNAMISGLSQNGYGKEALELFE 504

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M+  + +P   TFV+V+SACSH GLVD G L F+ M  ++G+ P  + Y C+VD+LSR 
Sbjct: 505 EMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRA 564

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L +AK  IE         ++R LL  CR + N ELG +A EKL+ L  +  +A+VLLS
Sbjct: 565 GKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLS 624



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 245/510 (48%), Gaps = 5/510 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           KS   G  +H  I+KL  ++  I+L N+LI  Y+KC +      VFD +  ++++SW  +
Sbjct: 21  KSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCL 80

Query: 117 VSAAIQNGEFDMG--LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++   Q G       ++++  M+ +  +PN      +     ++ +  FG   H  A+K+
Sbjct: 81  INGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKM 140

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               + FVG S+LN Y K G +  A  VF  +   +   W  MI GYA      EA  V 
Sbjct: 141 ACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVF 200

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  E   ++++ F + L   ++    D G+QIH L +++ +   +SI+NAL+ MY K 
Sbjct: 201 ELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKC 260

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D + +VFE   DK+ I+W+ +  G++++ +  +   LF +   +G  P+  T   +L
Sbjct: 261 GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVL 320

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C     ++ G Q+    L  GF  +  + ++L+ M+ + G  E A   F+ +   ++ 
Sbjct: 321 NACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLV 380

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W  +++GY  N  + D L  +C +   G+  N  T   V++ C          QIH   
Sbjct: 381 LWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHART 440

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           IK G      I S+L   Y   G L+  +  F    ER D+ SW AM+S L   G+  EA
Sbjct: 441 IKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER-DIISWNAMISGLSQNGYGKEA 499

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           + +F  + +   KPD+     +L++C+ +G
Sbjct: 500 LELFEEMRQQDTKPDDVTFVNVLSACSHMG 529



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 203/421 (48%), Gaps = 19/421 (4%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           IF A S     NL S   G Q H   +K+    D+F+ ++L+ MY K G       VFD 
Sbjct: 117 IFTAAS-----NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDR 171

Query: 105 MAERNLVSW-TLIVSAAIQN--GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           M ERN V+W T+I   AIQ   GE     +++  M+      NEFA  SV+         
Sbjct: 172 MPERNEVTWATMISGYAIQRLAGE---AFEVFELMRREEEDVNEFAFTSVLSALAVPEFV 228

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLN----FYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + G  IHC A+K  +     V  S+LN     YAK G +  + +VF   +  +   W+AM
Sbjct: 229 DSGKQIHCLAVKTGL----LVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAM 284

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GYA  G   +AL + S M F GI   ++T +  L  CS     + G+Q+H  +++   
Sbjct: 285 ITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGF 344

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E  + I+ AL+DMY KS   + A K F  +   D++ W ++  G+ +N       SL+ +
Sbjct: 345 ESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCR 404

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             + G  PN +T + +L+ C  L   D G Q+    +  G   E  + S+L  M+ +CG 
Sbjct: 405 MQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGN 464

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E  + VF  +  ++I +WN ++SG   N    + L+ F  + +   + +  TF  V+  
Sbjct: 465 LEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524

Query: 458 C 458
           C
Sbjct: 525 C 525



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 184/366 (50%), Gaps = 3/366 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H   VK G    + + N L+ MY+KCG     L+VF+   ++N ++W+ +++   Q
Sbjct: 231 GKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQ 290

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+    LK++  M   G  P+EF +  V+  C    A E G  +H + LK+  E   ++
Sbjct: 291 SGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYI 350

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ YAK G    A + F  +   D+  W +MI GY   G   +AL++   M  EGI
Sbjct: 351 MTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ T  + L+ CS +A FD GRQIH   I+  +   ++I +AL  MY K   ++    
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNI 470

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF RM ++D+ISWN +  G S+N    +   LF +     ++P+ VTF  +L  C  +  
Sbjct: 471 VFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGL 530

Query: 363 LDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELL 420
           +D G L  + +    G L +    + ++ +  R G +  A    ++ +  + +  W  LL
Sbjct: 531 VDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILL 590

Query: 421 SGYCFN 426
            G C N
Sbjct: 591 -GACRN 595



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 115/275 (41%), Gaps = 44/275 (16%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + +A  L    NL +   G Q+H   +K G   ++ + + L  MY+KCG    G  VF
Sbjct: 413 NELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVF 472

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ER+++SW  ++S   QNG     L+++ +M+     P++    +V+  C  MG  +
Sbjct: 473 RRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVD 532

Query: 163 FGY-----SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-WNA 216
            G+         F L  ++E      C V +  ++ G +  A+    S + D   C W  
Sbjct: 533 SGWLYFRMMFDEFGLLPKVEH---YACMV-DVLSRAGKLYEAKEFIESTTIDHGLCLWRI 588

Query: 217 MIGG------YAHCGYGFEALNVVSS------MLFEGI--------------TMDKYTFI 250
           ++G       Y    Y  E L  + S      +L  GI              +M K   +
Sbjct: 589 LLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGV 648

Query: 251 NALQGCSL------VADFDIGRQIHGLI--IRSEV 277
           +   GCS       V  F +G Q+H  I  IR+E+
Sbjct: 649 SKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEI 683


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 173/586 (29%), Positives = 311/586 (53%), Gaps = 3/586 (0%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV-V 234
           ++ + F+   ++N  +K   V  A  VF  +   ++  W++M+  Y+  GY  EAL V V
Sbjct: 80  LQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFV 139

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
                 G   +++   + ++ C+ +   + G Q+HG ++RS  +  + +  +LID Y K+
Sbjct: 140 DLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKN 199

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             ++ A  VF+++++K  ++W T+  G+++      +  LF +   +   P+    S +L
Sbjct: 200 GNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVL 259

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L  L+ G Q+    L  G   + +V + LI  + +C  V+    +FD +  KNI 
Sbjct: 260 SACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNII 319

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W  ++SGY  N  D + +K F  +   G + +G     V+ +C   E  +   Q+H   
Sbjct: 320 SWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYT 379

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           IK    S  ++ + LI  Y     L ++ +  +     ++ S+ AM+     Q    EA+
Sbjct: 380 IKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEAL 439

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +FH +    +KP+E+    ++ + + + + +  +  H  ++K+G +   +V +A++D Y
Sbjct: 440 ELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMY 499

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG I+ AR  F+ S    DV+ +N++I  +A HG   EA+ +F +M    +QP+  TF
Sbjct: 500 AKCGSIEEARKMFNSSI-WRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 558

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           V+V+SACSH G V+ G   F SM   +G++P  + Y C+V +L R+G L +AK  IE MP
Sbjct: 559 VAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP 617

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +P+  V+RSLLS CRI GN ELG++A+E  +   PK+  +++LLS
Sbjct: 618 IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLS 663



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/565 (26%), Positives = 280/565 (49%), Gaps = 9/565 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I+  G  +D FL N LI + SK         VFD+M  +NL++W+ +VS   Q G 
Sbjct: 71  IHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGY 130

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            +  L ++VD+ + +G  PNEF + SV++ C  +G  E G  +H F ++   +++ +VG 
Sbjct: 131 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 190

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++FY+K G++  A  VF  +S      W  +I GY  CG    +L + + M    +  
Sbjct: 191 SLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVP 250

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+Y   + L  CS++   + G+QIH  ++R   E  +S+VN LID Y K + +    K+F
Sbjct: 251 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 310

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M  K++ISW T+  G+ +N    +   LF +    G +P+    + +L  CG    L+
Sbjct: 311 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALE 370

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+    +      +E V + LI M+ +   +  A  VFD ++ +N+ ++N ++ GY 
Sbjct: 371 QGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYS 430

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                ++ L+ F  +     + N  TF  ++       + +   Q H  ++K G   C +
Sbjct: 431 SQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPF 490

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G ++ + +  N +   D+  W +M+S     G   EA+ +F  +++ G
Sbjct: 491 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG 550

Query: 545 EKPDEYILGTILNSCAAIGAYQ----RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            +P+      +L++C+  G  +       S+  F IK G  TE Y  + V+    + G +
Sbjct: 551 IQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPG--TEHY--ACVVSLLGRSGKL 606

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMA 625
             A+   ++       IV+ +L+ A
Sbjct: 607 FEAKEFIEKMPIEPAAIVWRSLLSA 631



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 204/399 (51%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG +V+ GF  D+++  +LI  YSK G       VFD+++E+  V+WT I++   +
Sbjct: 170 GAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTK 229

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G   + L+++  M+    +P+ + V SV+  C  +   E G  IH + L+   E +  V
Sbjct: 230 CGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSV 289

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++FY K   V A  ++F  +   ++  W  MI GY    + +EA+ +   M   G 
Sbjct: 290 VNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGW 349

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +   + L  C      + GRQ+H   I++ +E    + N LIDMY KS+ +  A K
Sbjct: 350 KPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKK 409

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ MA+++VIS+N +  G+S  +   +   LFH+  +   +PN  TF+ L+     L  
Sbjct: 410 VFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLAS 469

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q     +  G      VT++L+ M+ +CG++E A  +F++  ++++  WN ++S 
Sbjct: 470 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 529

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +  +    + L  F  + + G++ N  TF  V+  C  +
Sbjct: 530 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHA 568



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 164/306 (53%), Gaps = 2/306 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H ++++ G   D+ + N LI  Y+KC     G ++FD+M  +N++SWT ++S  +Q
Sbjct: 271 GKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ 330

Query: 123 NGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           N  FD   +K++ +M   G+ P+ FA  SV+  C S  A E G  +H + +K  +E + F
Sbjct: 331 NS-FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF 389

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   +++ YAK   +  A++VF  ++  +V  +NAMI GY+      EAL +   M    
Sbjct: 390 VKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRL 449

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              +++TF   +   S +A    G+Q H  +++  ++    + NAL+DMY K   ++ A 
Sbjct: 450 QKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEAR 509

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F     +DV+ WN++    +++    +   +F + +  G +PN+VTF  +L  C    
Sbjct: 510 KMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAG 569

Query: 362 DLDLGL 367
            ++ GL
Sbjct: 570 RVEDGL 575


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 202/739 (27%), Positives = 331/739 (44%), Gaps = 80/739 (10%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD---------------------- 103
           +H  I +    +D FL N+LI +YSKC        VFD                      
Sbjct: 27  IHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNIFSYNAILSAFCKSNN 86

Query: 104 ---------EMAERNLVSWTLIVSAAIQNGEFDMGLKMY-VDMKTNGFMPNEFAVGSVMK 153
                    +M ERN VS   I++  ++NG     L  Y + M      P+     +V  
Sbjct: 87  LQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFS 146

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C  +     G   H   LK+  + N +V  ++L  Y K G    A RVF  I   +   
Sbjct: 147 ACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVT 206

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--------- 264
           +  M+GG +      E L +   ML +GI +D  +    L  C+    F +         
Sbjct: 207 FTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLST 266

Query: 265 ---GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
              G+QIH L ++   E  + + N+L+DMY K+  MD A  VFE +    V+SWN +  G
Sbjct: 267 NAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISG 326

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +    +  +    F +    G  P+ VT+  +L  C K  D+ +G Q             
Sbjct: 327 YGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQ------------- 373

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
                                 +FD +S  ++ +WN +LSGY  +    + ++ F  +  
Sbjct: 374 ----------------------IFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQF 411

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
                +  T   ++ +C      +   Q+H    K GF    Y+ SSLI  Y   G+++ 
Sbjct: 412 QWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEV 471

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S    +    LD+  W +M++         +A+  F  + + G  P E+   TI +SCA 
Sbjct: 472 SKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAK 531

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + +  + + IH  +IK G+   V+V S++++ Y KCGD+  AR  FD     N ++ +N 
Sbjct: 532 LSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKN-IVTWNE 590

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I  YAH+G   EA+ ++  M  +  +P   TFV+V++ACSH  LVD+G  +F SM  ++
Sbjct: 591 MIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKF 650

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
            + P  D Y C++D L R G   + + +++ MP++    V+  +LS CR+H N  L + A
Sbjct: 651 EVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRA 710

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +E+L  L P+N A +VLL+
Sbjct: 711 AEELHRLNPRNSAPYVLLA 729



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 180/725 (24%), Positives = 323/725 (44%), Gaps = 66/725 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++   I  A   S    LK    G + HG ++K+GF ++I++ N L+ MY+KCG      
Sbjct: 134 VKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAF 193

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---V 156
           RVF+ + E N V++T ++    Q  +   GL+++  M   G   +  ++ +++ +C   V
Sbjct: 194 RVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGV 253

Query: 157 SMGASE---------FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           S G  +          G  IH  A+K   E++  +  S+L+ YAK GD+ +AE VF ++ 
Sbjct: 254 SFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLD 313

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
              V  WN MI GY +     +AL     M   G   D  T+IN L  C    D  +GRQ
Sbjct: 314 KHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQ 373

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           I                                   F+ M+   +ISWN +  G++++ +
Sbjct: 374 I-----------------------------------FDCMSSPSLISWNAILSGYNQSAD 398

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            G+   LF K       P+  T +I+L  C +L  L+ G Q+  ++   GF D+  V SS
Sbjct: 399 HGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASS 458

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI ++ +CG +E++  VF  +S  ++  WN +++G+  N  + D L  F  + + G   +
Sbjct: 459 LINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPS 518

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             +F  +  +C +  +     QIH  IIK G+    ++ SSL++ Y   G +  +  + +
Sbjct: 519 EFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFD 578

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                ++ +W  M+    H G+  EAV+++  ++ +GEKPD+     +L +C+       
Sbjct: 579 MMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDE 638

Query: 568 TKSIHPFVI-KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
              I   ++ K     ++   + +ID   + G      +  D     +D IV+  ++ + 
Sbjct: 639 GVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSC 698

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQP 685
             H  VS A    +++   N + S A +V + +  S  G  D   ++   M D+Q    P
Sbjct: 699 RVHANVSLAKRAAEELHRLNPRNS-APYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDP 757

Query: 686 S----------PDCYGCLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGCRIH 732
                       +      +M S  G L+DA+ V ++     F   P+++      C+ +
Sbjct: 758 GYSRSEFKYDVQNKTSFFANMYSCFGNLDDAQFVRDLTSDKQFYKDPSLHYPF---CKTN 814

Query: 733 GNKEL 737
            N  L
Sbjct: 815 NNDVL 819



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/343 (19%), Positives = 142/343 (41%), Gaps = 48/343 (13%)

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           +EV       ++++C  +++      IH  I +    S  ++C+ LI  Y    Q+ ++ 
Sbjct: 1   MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60

Query: 504 EFSNGAERLDMASWGAMMSA-------------------------------LVHQGHNHE 532
              +     ++ S+ A++SA                               +V  G+  +
Sbjct: 61  HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120

Query: 533 AVTIFH-SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           A+  +   +V    KP      T+ ++C  +      +  H  V+K+GF++ +YV++A++
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL 180

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             Y KCG  + A   F+     N+V  + T++   +    V E +E+F  M    +    
Sbjct: 181 CMYTKCGLNEDAFRVFEGIVEPNEV-TFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDS 239

Query: 652 ATFVSVMSACSHK---GLVDKGCLL--------FKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            +  +++  C+     G+ D    L          ++  ++G +        L+DM ++ 
Sbjct: 240 VSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKT 299

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           G ++ A++V E +  + S   +  ++SG   +GN+   E A E
Sbjct: 300 GDMDSAENVFENLD-KHSVVSWNIMISG---YGNRCDSEKALE 338


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 187/638 (29%), Positives = 325/638 (50%), Gaps = 7/638 (1%)

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            DM +K+  D + N    + F    V+K C        G  IH   +K+ +  + FVG +
Sbjct: 15  IDMFVKLITDTEFNA---DNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGIT 243
           ++  Y K G V AA +VF+ +   ++  WN++I G++  G+  +  +++  M+   EG+ 
Sbjct: 72  LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T +  L  C+   D  +G +IHGL ++  +   + + N+L+DMY K   +  A  +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLD 362
           F++   K+ +SWNT+ GG        +  +LF +  +      N VT   +L  C ++  
Sbjct: 192 FDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQ 251

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L    +L   ++  GF  +E V +  +  + +CG +  A  VF ++  K + +WN L+ G
Sbjct: 252 LRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGG 311

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
              N      L  +  +  SG+  +  T   ++      ++ +   ++HG +++ G    
Sbjct: 312 CAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEID 371

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +I  SL+  Y++ G+  ++    +G E     SW AM+S     G   +A+ +F  LV 
Sbjct: 372 SFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS 431

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G +P +  + ++L +C+   A +  K  H + +K     +V+VA + ID YAK G IK 
Sbjct: 432 DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKE 491

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +R  FD    + D+  +N +I AY  HG   E++E+F++M+     P   TF+ +++ CS
Sbjct: 492 SRSVFD-GLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCS 550

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLV++G   F  M + +G++P  + Y C++DML R G L+DA  ++  MP QP   V+
Sbjct: 551 HAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVW 610

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            SLLS CR  G  E+G+  +EKLL L PKN   +V LS
Sbjct: 611 SSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLS 648



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 287/635 (45%), Gaps = 8/635 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R LG  +HG ++K+G   D+F+ N LIAMY K G+    ++VF  M  RNLVSW  I+S 
Sbjct: 47  RGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISG 106

Query: 120 AIQNGEFDMGLKMYVDMKT--NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
             +NG       M V+M     G +P+   + +V+ VC      + G  IH  A+K+ + 
Sbjct: 107 FSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLS 166

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           ++  V  S+++ Y+K G +  A+ +F   +  +   WN MIGG    GY FEA N+   M
Sbjct: 167 EDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREM 226

Query: 238 -LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
            + E I +++ T +N L  C  ++     +++HG  IR   +    + N  +  Y K   
Sbjct: 227 QMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGM 286

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A +VF  M  K V SWN L GG ++N +P +  +L+ +   SG  P+  T   LL  
Sbjct: 287 LICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
              L  L  G ++    L  G   +  +  SL+ ++  CG    A  +FD +  K+  +W
Sbjct: 347 SAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSW 406

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++SGY  N    D L  F  +   G + +      V+  C +    ++  + H   +K
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALK 466

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
                  ++  S I  Y   G +  S    +G +  D+ASW A+++A    G   E++ +
Sbjct: 467 ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIEL 526

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           F  + + G+ PD +    IL  C+  G  +   K  +      G   ++   + V+D   
Sbjct: 527 FERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLG 586

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TF 654
           + G +  A     +     D  V+++L+    + G +     + +  KL  L+P     +
Sbjct: 587 RAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAE--KLLELEPKNVENY 644

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           VS+ +  +  G  D      + M    G+Q    C
Sbjct: 645 VSLSNLYAGSGRWDD-VRRVRQMIKDIGLQKDAGC 678



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 26/350 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  D   +   L  S +LKS   G +VHG +++ G   D F+  +L+++Y  CG    
Sbjct: 331 SGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSS 390

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +FD M E++ VSW  ++S   QNG  +  L ++  + ++GF P++ AV SV+  C  
Sbjct: 391 ARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ 450

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
             A   G   HC+ALK  + ++ FV CS ++ YAK G +  +  VF  + + D+  WNA+
Sbjct: 451 QSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAI 510

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHG 270
           I  Y   G G E++ +   M   G   D +TFI  L  CS   LV +    F+  +  HG
Sbjct: 511 IAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHG 570

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPG 329
                 +E  +     ++DM  ++  +D A ++   M ++ D   W++L   F  N    
Sbjct: 571 ------IEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLL-SFCRNFGEL 623

Query: 330 QTASLFHKFILS---GSRPNHVTFSILLRQCGKLLDL--------DLGLQ 368
           +   +  + +L     +  N+V+ S L    G+  D+        D+GLQ
Sbjct: 624 EIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQ 673


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 172/576 (29%), Positives = 291/576 (50%), Gaps = 2/576 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITM 244
           VL    K G +  A ++F  +   D   W  +I GY +     EAL++ S M  E G+ M
Sbjct: 7   VLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D +    AL+ C L      G  +HG  ++++   S+ + +AL+DMY+K   +D    VF
Sbjct: 67  DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVF 126

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M  ++V+SW  +  G        +  + F    +     +  TFS  L+ C     L+
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALN 186

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G ++ C  L  GF     V ++L  M+ +CG ++    +F++++ +++ +W  ++    
Sbjct: 187 YGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNV 246

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               + + +K F  + E+ V  N  TF  V+  C      +   Q+H  +I+ G      
Sbjct: 247 QIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLS 306

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +S++  Y    QLD +     G  R D+ SW  M+S     G   EA      +   G
Sbjct: 307 VANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREG 366

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +P+E+   ++L+ C  +   ++ K +H  V+ +G      V SA+I+ Y+KCG IK A 
Sbjct: 367 PRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEAS 426

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD++   N+++ +  +I  YA HG   EA+++F K+    L+P   TF++V++ACSH 
Sbjct: 427 KIFDEA-EYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHA 485

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD G   F S+   + + PS D YGC++D+L R G L DA+ +I+ MPFQ    V+ +
Sbjct: 486 GLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWST 545

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL  CRIHG+ + G+ A+EK+L L P     H+ L+
Sbjct: 546 LLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLA 581



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/611 (25%), Positives = 275/611 (45%), Gaps = 28/611 (4%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVG 149
           K G+     ++FD+M +R+ +SWT I+S  +        L ++  M    G   + F + 
Sbjct: 13  KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
             +K C    +  FG S+H +++K     + FVG ++++ Y K+G V     VF  +   
Sbjct: 73  LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +V  W A+I G    GY  EAL   S M  + +  D YTF +AL+ C+     + GR+IH
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              ++        + N L  MY K   +DY  ++FE M  +DV+SW T+     +     
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEE 252

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
                F +   +   PN  TF+ ++  C  L  ++ G QL    +  G +D  +V +S++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +C  +++A +VF  +S ++I +W+ ++SGY    C  +       +   G   N  
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
            F  V+  C      +   Q+H  ++  G      + S+LI  Y   G +  + +  + A
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEA 432

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           E  ++ SW AM++     G++ EA+ +F  L + G +PD      +L +C+         
Sbjct: 433 EYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS--------- 483

Query: 570 SIHPFVIKLGFN-----TEVYVA-------SAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
             H  ++ LGF+     ++V+           +ID   + G +  A           D +
Sbjct: 484 --HAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDV 541

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKS 676
           V++TL+ A   HG V       +  K+  L P+ A T +++ +  + KG   +   + K 
Sbjct: 542 VWSTLLRACRIHGDVDCGKRAAE--KILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKM 599

Query: 677 MDSQYGMQPSP 687
           M S+ G+   P
Sbjct: 600 MKSK-GVVKEP 609



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/564 (26%), Positives = 250/564 (44%), Gaps = 34/564 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  DP  L+ +L       S   G  +HG+ VK  F N +F+ + L+ MY K G    G 
Sbjct: 64  LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF EM  RN+VSWT I++  ++ G     L  + DM       + +   S +K C   G
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A  +G  IHC  LK       FV  ++   Y K G +    R+F S++  DV  W  +I 
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
                G    A+     M    ++ +++TF   + GC+ +   + G Q+H  +IR  +  
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           S+S+ N+++ MY K   +D A  VF+ ++ +D+ISW+T+  G+++     +         
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMR 363

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G RPN   F+ +L  CG +  L+ G QL    L  G      V S+LI M+ +CG+++
Sbjct: 364 REGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIK 423

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +FD   Y NI +W  +++GY  +    + +  F  + + G+  +  TF  V+  C 
Sbjct: 424 EASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACS 483

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                      H  ++  GF    +  +SL K +      D+               +G 
Sbjct: 484 -----------HAGLVDLGF----HYFNSLSKVHQICPSKDH---------------YGC 513

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+  L   G  ++A ++  S+     + D+ +  T+L +C   G     K     +++L 
Sbjct: 514 MIDLLCRAGRLNDAESMIQSM---PFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLD 570

Query: 580 FNTEVYVASAVIDAYAKCGDIKGA 603
            N  V     + + YA  G  K A
Sbjct: 571 PNCAV-THITLANMYAAKGKWKEA 593



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/451 (23%), Positives = 218/451 (48%), Gaps = 4/451 (0%)

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK-FILSG 342
           +N ++   +K+  ++ A ++F++M  +D ISW T+  G+    N  +  SLF K ++  G
Sbjct: 4   INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPG 63

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              +    S+ L+ CG  + +  G  L   ++   F++   V S+L+ M+ + G V+   
Sbjct: 64  LHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGC 123

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            VF  +  +N+ +W  +++G      + + L  F ++W   V  +  TF   ++ C  S 
Sbjct: 124 IVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSG 183

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
                 +IH   +K GF++  ++ ++L   Y   G+LD          + D+ SW  ++ 
Sbjct: 184 ALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIM 243

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           + V  G    AV  F  + E    P+E+    +++ CA +G  +  + +H  VI+ G   
Sbjct: 244 SNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVD 303

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            + VA++++  Y+KC  +  A   F Q  +  D+I ++T+I  YA  G   EA +    M
Sbjct: 304 SLSVANSIMAMYSKCWQLDLASTVF-QGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWM 362

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +    +P++  F SV+S C +  ++++G  L   +    G++ +      L++M S+ G 
Sbjct: 363 RREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLC-VGLEQNTMVQSALINMYSKCGS 421

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           +++A  + +   +  +   + ++++G   HG
Sbjct: 422 IKEASKIFDEAEYN-NIVSWTAMINGYAEHG 451


>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 193/707 (27%), Positives = 347/707 (49%), Gaps = 46/707 (6%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 63  GRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVK 122

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN- 179
            + G  +  L  +V+M  +   P+ F V +V K C ++  S FG  IH +  K  +  + 
Sbjct: 123 CRVGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDC 182

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FV  S+ + Y K G +  A +VF  I   +V  WNA++ GY   G   EA+ ++  M  
Sbjct: 183 VFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMRE 242

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+   + T    L   + +     G+Q H + + + +E    +  ++++ Y K   ++Y
Sbjct: 243 EGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEY 302

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF+RM  KDV++WN L  G+ +         +     L   + + VT S L+    +
Sbjct: 303 AEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAAR 362

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             +  LG ++QC  +   F  +  + S++I M+ +CG++  A  VFD+   K++  WN L
Sbjct: 363 TQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTL 422

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGA-I 474
           L+ Y  +    + L+ F  +    V  N  T+  ++ +  R+    E ++M  Q+  + I
Sbjct: 423 LAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGI 482

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           + T                                    + SW  MM+ LV  G + EAV
Sbjct: 483 VPT------------------------------------LVSWTTMMNGLVQNGCSEEAV 506

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDA 593
                + E+G +P+ + +   L++CA + +    +S+H ++I+    ++ V + +A+ID 
Sbjct: 507 HYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDM 566

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCGDI  A   F +   S ++ ++N +I AYA  G V EA++++  ++   ++P   T
Sbjct: 567 YAKCGDISKAEKVFKRKSYS-ELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNIT 625

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F +V+SAC+H G +++   +F  M S++GM+P  + YG +VD+L+  G  E A  ++E M
Sbjct: 626 FTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEM 685

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P++P   + +SLL  C      EL ++ S +LL   P N   +V +S
Sbjct: 686 PYKPDARMIQSLLVTCNEEHKTELVDYLSRQLLESEPDNSGNYVTIS 732



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/635 (24%), Positives = 277/635 (43%), Gaps = 46/635 (7%)

Query: 63  GTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  +HG++ K G   D +F+ ++L  MY KCG      +VFDE+ ERN+V+W  ++   +
Sbjct: 166 GRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 225

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  +++  DM+  G  P    V + +    +M     G   H  A+   +E +  
Sbjct: 226 QNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNI 285

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G SVLNFY K+G +  AE VF  +   DV  WN +I GY   G   +A+ +   M  E 
Sbjct: 286 LGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEK 345

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T    +   +   +  +G+++    IR   E  I + + +IDMY K   +  A 
Sbjct: 346 LKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAK 405

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+    KD+I WNTL   ++E+   G+   LF++  L    PN +T+++         
Sbjct: 406 RVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNL--------- 456

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI----TTWN 417
                                     +I    R G V+ A  +F  +    I     +W 
Sbjct: 457 --------------------------IILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWT 490

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++G   N C  + +     + ESG+  N  +    +  C    +  +   +HG II+ 
Sbjct: 491 TMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRN 550

Query: 478 GF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
              SS   I ++LI  Y   G +  + +        ++  + AM+SA    G+  EA+ +
Sbjct: 551 QLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDL 610

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYA 595
           + SL + G KPD      +L++C   G   +   I    V K G    +     ++D  A
Sbjct: 611 YRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGLMVDLLA 670

Query: 596 KCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
             G+ + A R+  +  +  +  ++ + L+     H   +E ++   +  L +   +   +
Sbjct: 671 SAGETEKALRLMEEMPYKPDARMIQSLLVTCNEEHK--TELVDYLSRQLLESEPDNSGNY 728

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           V++ +A + +G  D+  +  + M    G++  P C
Sbjct: 729 VTISNAYAGEGSWDE-VVKMREMMKDKGLKKKPGC 762



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 138/517 (26%), Positives = 240/517 (46%), Gaps = 28/517 (5%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNA 286
           EAL++V+ M F  + +    +   LQGC    DF  GRQIH  I+++    + +  I   
Sbjct: 27  EALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGEFYAKNEYIETK 86

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFHKFILS 341
           L+  Y K    + A  +F ++  ++V SW  + G     G +E    G     F + +  
Sbjct: 87  LVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMG-----FVEMLKD 141

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEM 400
              P++     + + CG L     G  +       G   D   V SSL  M+ +CG ++ 
Sbjct: 142 EIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDD 201

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VFD +  +N+  WN L+ GY  N  + + ++  C++ E GVE    T      + C 
Sbjct: 202 ARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTV-----STCL 256

Query: 461 SENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           S +  M G     Q H   +  G      + +S++  Y   G ++ +    +     D+ 
Sbjct: 257 SASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVV 316

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W  ++S  V QG   +A+ +   +     K D   L T++++ A     +  K +  + 
Sbjct: 317 TWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYC 376

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           I+  F +++ +AS VID YAKCG I  A+  FD +    D+I++NTL+ AYA  GL  EA
Sbjct: 377 IRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQ-KDLILWNTLLAAYAESGLSGEA 435

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           + +F +M+L ++ P+  T+  ++ +    G VD+   +F  M S  G+ P+   +  +++
Sbjct: 436 LRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSS-GIVPTLVSWTTMMN 494

Query: 696 MLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
            L +NG  E+A H +  M     +P+       LS C
Sbjct: 495 GLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSAC 531



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/521 (20%), Positives = 206/521 (39%), Gaps = 75/521 (14%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   V  G   D  L  +++  Y K G   +   VFD 
Sbjct: 250 VTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDR 309

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  +++V+W L++S  +Q G  +  ++M   M+      +   + ++M        S+ G
Sbjct: 310 MIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLG 369

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             + C+ ++   E +  +  +V++ YAK G +  A+RVF S    D+  WN ++  YA  
Sbjct: 370 KEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAES 429

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 430 GLSGEALRLFYEMQLESVPPNAITW----------------------------------- 454

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDV----ISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I    ++  +D A ++F +M    +    +SW T+  G  +N    +      K   
Sbjct: 455 NLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQE 514

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVE 399
           SG RPN  + ++ L  C  L  L LG  +    +         ++ ++LI M+ +CG + 
Sbjct: 515 SGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDIS 574

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF   SY  +  +N ++S Y  +    + +  + ++ + G++ +  TF  V+  C 
Sbjct: 575 KAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACN 634

Query: 460 RSENQQMVGQIHGAII-KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
            + +     +I   ++ K G   C                               +  +G
Sbjct: 635 HAGDINQAIEIFSDMVSKHGMEPC-------------------------------LEHYG 663

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            M+  L   G   +A+ +     E   KPD  ++ ++L +C
Sbjct: 664 LMVDLLASAGETEKALRLME---EMPYKPDARMIQSLLVTC 701



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/343 (21%), Positives = 148/343 (43%), Gaps = 72/343 (20%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + L+  +S +   ++  LG +V  + ++  F +DI L + +I MY+KCG      
Sbjct: 346 LKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAK 405

Query: 100 RVFDEMAERNL-----------------------------------VSWTLIVSAAIQNG 124
           RVFD   +++L                                   ++W LI+ +  +NG
Sbjct: 406 RVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNG 465

Query: 125 EFDMGLKMYVDMKTNGFM-----------------------------------PNEFAVG 149
           + D   +M++ M+++G +                                   PN F++ 
Sbjct: 466 QVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSIT 525

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISS 208
             +  C ++ +   G S+H + ++ ++  +   +  ++++ YAK GD++ AE+VF   S 
Sbjct: 526 VALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSY 585

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            ++  +NAMI  YA  G   EA+++  S+   GI  D  TF N L  C+   D +   +I
Sbjct: 586 SELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEI 645

Query: 269 -HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
              ++ +  +E  +     ++D+   +   + A ++ E M  K
Sbjct: 646 FSDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMPYK 688



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYF 95
           +S LR +   +  +LS   NL S  LG  VHG+I++    ++ + ++  LI MY+KCG  
Sbjct: 514 ESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDI 573

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VF   +   L  +  ++SA   +G     + +Y  ++  G  P+     +V+  C
Sbjct: 574 SKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSAC 633

Query: 156 VSMG 159
              G
Sbjct: 634 NHAG 637


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/613 (30%), Positives = 303/613 (49%), Gaps = 3/613 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S+++ C        G   H   L   I  N  +G  +L  Y   G    A+ +FY +   
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               WN MI G+   G    AL     ML  G   DKYTF   ++ C  +    +GR +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             I     E  + + ++LI  Y ++  +  A  +F+RM  KD + WN +  G+ +N +  
Sbjct: 171 DKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWD 230

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV--TSS 387
               +F +   + + PN VTF+ +L  C   + ++ G QL  L +  G   +  V  T +
Sbjct: 231 NATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFA 290

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI ++ +C  VEMA  +FD  +  +I     ++SGY  N  + + L+ F  + +  +  N
Sbjct: 291 LIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRAN 350

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   V+  C       +  ++HG I+K G     Y+ S+++  Y   G+LD + +   
Sbjct: 351 SVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFI 410

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           G    D   W +M+++    G   EA+ +F  +  AG K D   +   L++CA + A   
Sbjct: 411 GISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHY 470

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH F+++  F ++++  SA+ID Y+KCG++  A   FD     N+V  +N++I AY 
Sbjct: 471 GKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV-SWNSIIAAYG 529

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +HG + +++ +F  M    +QP   TF++++SAC H G VD+G   F+ M  + G+    
Sbjct: 530 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 589

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           + Y C+VD+  R G L +A  +I  MPF P   V+ +LL  CR+HGN EL E AS  L  
Sbjct: 590 EHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFD 649

Query: 748 LLPKNDAAHVLLS 760
           L P+N   +VLLS
Sbjct: 650 LDPQNSGYYVLLS 662



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 155/632 (24%), Positives = 275/632 (43%), Gaps = 9/632 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q H  ++  G   +  L   L+ MY  CG F     +F ++       W  ++     
Sbjct: 65  GRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTM 124

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+FD  L  Y  M   G +P+++    V+K C  + +   G  +H     +  E + FV
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S++ FY++ G +  A  +F  + S D   WN M+ GY   G    A  V   M     
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN--ALIDMYIKSSGMDYA 300
             +  TF   L  C+     + G Q+HGL++ S +E    + N  ALID+Y K   ++ A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMA 304

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F++    D++    +  G+  N        +F   +    R N VT + +L  C  L
Sbjct: 305 RKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 364

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L LG +L    L  G      V S+++ M+ +CG +++AH  F  +S K+   WN ++
Sbjct: 365 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMI 424

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +    N    + +  F  +  +G + +  +    +  C          +IH  +++  F 
Sbjct: 425 TSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFR 484

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  +  S+LI  Y   G LD +    +  E  +  SW ++++A  + G   +++ +FH +
Sbjct: 485 SDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGM 544

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF---VIKLGFNTEVYVASAVIDAYAKC 597
           +  G +PD      I+++C   G  Q  + IH F     +LG    +   + ++D + + 
Sbjct: 545 LGDGIQPDHVTFLAIISACGHAG--QVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRA 602

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  A    +    S D  V+ TL+ A   HG V E  E+  +  L +L P  + +  +
Sbjct: 603 GRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNV-ELAEVASR-NLFDLDPQNSGYYVL 660

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +S         +  L  +S+  + G+Q  P C
Sbjct: 661 LSNVHANAGQWESVLKIRSLMKERGVQKVPGC 692



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 202/404 (50%), Gaps = 2/404 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG  VH  I  +GF  D+F+ ++LI  YS+ G       +FD M  ++ V W ++
Sbjct: 160 LNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVM 219

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  ++NG++D    ++++M+     PN      V+ VC S     FG  +H   +   +
Sbjct: 220 LNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGL 279

Query: 177 EKNPFVGCS--VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           E +  V  +  +++ Y K  DV  A ++F   +  D+    AMI GY   G    AL + 
Sbjct: 280 EMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIF 339

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             +L E +  +  T  + L  C+ +A   +G+++HG I+++    S  + +A++DMY K 
Sbjct: 340 RWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 399

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A + F  ++DKD + WN++    S+N  P +   LF +  ++G++ + V+ S  L
Sbjct: 400 GRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAAL 459

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L  L  G ++    +   F  +    S+LI M+ +CG +++A  VFD +  KN  
Sbjct: 460 SACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV 519

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +WN +++ Y  +    D L  F  +   G++ +  TF  ++  C
Sbjct: 520 SWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISAC 563



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/487 (23%), Positives = 217/487 (44%), Gaps = 5/487 (1%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
            ++ LQ C+  +    GRQ H  ++ + +  +  +   L+ MY+       A  +F ++ 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
                 WN +  GF+           + K +  G+ P+  TF  +++ CG L  + LG  
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +       GF  +  V SSLI  +   G +  A  +FD +  K+   WN +L+GY  N  
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             +    F  +  +    N  TF  V+  C          Q+HG ++ +G      + ++
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 489 --LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
             LI  Y     ++ + +  +    +D+    AM+S  V  G N+ A+ IF  L++   +
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            +   L ++L +CA + A    K +H  ++K G     YV SA++D YAKCG +  A   
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F    +  D + +N++I + + +G   EA+++F +M +A  +    +  + +SAC++   
Sbjct: 409 F-IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPA 467

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           +  G  +   M  +   +        L+DM S+ G L+ A  V + M  + +   + S++
Sbjct: 468 LHYGKEIHAFM-MRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525

Query: 727 SGCRIHG 733
           +    HG
Sbjct: 526 AAYGNHG 532



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 139/285 (48%), Gaps = 6/285 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + + LA  L     L +  LG ++HGHI+K G     ++ + ++ MY+KCG      
Sbjct: 347 MRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAH 406

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F  +++++ V W  ++++  QNG+ +  + ++  M   G   +  ++ + +  C ++ 
Sbjct: 407 QTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLP 466

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A  +G  IH F ++     + F   ++++ Y+K G++  A RVF ++   +   WN++I 
Sbjct: 467 ALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIA 526

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--- 276
            Y + G   ++LN+   ML +GI  D  TF+  +  C      D G  IH     +E   
Sbjct: 527 AYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG--IHYFRCMTEELG 584

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           +   +     ++D++ ++  ++ AF +   M    D   W TL G
Sbjct: 585 IMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLG 629


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 160/510 (31%), Positives = 283/510 (55%), Gaps = 6/510 (1%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID--MYIKSSGMDYAFKVFERMADK 310
           L+ C  + D +   +IH  +I++ +     +   L++    +  + MDYA  +F ++ + 
Sbjct: 31  LEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEP 87

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D  ++N +  GF+  ++P +   LF +   +  +P+  TF  +L+ C +L  L  G Q+ 
Sbjct: 88  DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIH 147

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            L + CGF     V ++LI+M+  CG VE+A  VFD +S +N+ TWN + +GY  +    
Sbjct: 148 ALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWE 207

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           +V+K F  + E  +  +  T   V+  C R  + ++   I+  + + G      + +SL+
Sbjct: 208 EVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLV 267

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   GQ+D +    +  +R D+ +W AM+S         EA+ +FH + +A   P+E 
Sbjct: 268 DMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEI 327

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            + +IL+SCA +GA +  K +H F+ K      V + +A++D YAKCG ++ +   F + 
Sbjct: 328 TMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK- 386

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
               +V+ +  LI   A +G   +A+E F  M   N++P+  TF+ V+SACSH GLVD+G
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
             LF SM   +G++P  + YGC+VD+L R G +E+A   I+ MP QP+  ++R+LL+ C+
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +H N E+GE + ++L++L P +   ++LLS
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYILLS 536



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 200/432 (46%), Gaps = 17/432 (3%)

Query: 44  PIFLAK------SLSL-SENLKSRVLG--------TQVHGHIVKLGFTNDIFLQNNLI-- 86
           P+  AK      S+SL  EN K+ +L          ++H H++K        +  NL+  
Sbjct: 6   PLLPAKTPTAKTSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLES 65

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
           A         + + +F ++ E +  ++ +++            + ++ +M  N   P+EF
Sbjct: 66  AAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEF 125

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
               ++KVC  + A   G  IH   +K     + FV  ++++ YA  G+V  A RVF  +
Sbjct: 126 TFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEM 185

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
           S  +V  WN+M  GY   G   E + +   ML   I  D+ T ++ L  C  +AD ++G 
Sbjct: 186 SERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGE 245

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            I+  +    ++ + +++ +L+DMY K   +D A ++F++M  +DV++W+ +  G+S+  
Sbjct: 246 WINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQAS 305

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   LFH+   +   PN +T   +L  C  L  L+ G  +              + +
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+  + +CG+VE +  VF  +  KN+ +W  L+ G   N      L+ F  + E  VE 
Sbjct: 366 ALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEP 425

Query: 447 NGCTFFYVVETC 458
           N  TF  V+  C
Sbjct: 426 NDVTFIGVLSAC 437



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 187/374 (50%), Gaps = 4/374 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +   L++   G Q+H  I+K GF +  F++N LI MY+ CG      RVFDEM+ERN+
Sbjct: 131 LKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNV 190

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +W  + +   ++G ++  +K++ +M       +E  + SV+  C  +   E G  I+ +
Sbjct: 191 RTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRY 250

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             +  ++ NP +  S+++ YAK G V  A R+F  +   DV  W+AMI GY+      EA
Sbjct: 251 VEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREA 310

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L++   M    I  ++ T ++ L  C+++   + G+ +H  I +  ++ ++++  AL+D 
Sbjct: 311 LDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDF 370

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   ++ + +VF +M  K+V+SW  L  G + N    +    F+  +     PN VTF
Sbjct: 371 YAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTF 430

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNV 408
             +L  C     +D G  L  +++   F  E  +     ++ +  R G +E A     N+
Sbjct: 431 IGVLSACSHAGLVDEGRDL-FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489

Query: 409 SYK-NITTWNELLS 421
             + N   W  LL+
Sbjct: 490 PIQPNAVIWRTLLA 503



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 2/290 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + L   L+    L    LG  ++ ++ + G   +  L  +L+ MY+KCG      
Sbjct: 221 IRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTAR 280

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD+M  R++V+W+ ++S   Q       L ++ +M+     PNE  + S++  C  +G
Sbjct: 281 RLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG 340

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A E G  +H F  K R++    +G ++++FYAK G V ++  VF  +   +V  W  +I 
Sbjct: 341 ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
           G A  G G +AL     ML + +  +  TFI  L  CS     D GR +   + R   +E
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIE 460

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
             I     ++D+  ++  ++ AF+  + M    + + W TL      +KN
Sbjct: 461 PRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKN 510


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/580 (30%), Positives = 305/580 (52%), Gaps = 5/580 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+ + + G++  A  VF  +   ++  WN ++GGYA  G   EAL++   ML+ G
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D YTF   L+ C  + +   GR+IH  +IR   E  + +VNALI MY+K   ++ A 
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTAR 262

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF++M ++D ISWN +  G+ EN    +   LF   I     P+ +T + ++  C  L 
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D  LG Q+    L   F  + ++ +SLI M+   G +E A +VF     +++ +W  ++S
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMIS 382

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY         L+T+  +   G+  +  T   V+  C    N  M   +H    + G  S
Sbjct: 383 GYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVS 442

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SLI  Y     +D + E  +     ++ SW +++  L       EA+  F  ++
Sbjct: 443 YSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMI 502

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KP+   L  +L++CA IGA    K IH   ++ G + + ++ +A++D Y +CG ++
Sbjct: 503 RR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRME 561

Query: 602 GARMAFDQSFN-SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
               A+ Q F+  ++V  +N L+  YA  G  + A E+F +M  +N+ P++ TF+S++ A
Sbjct: 562 ---YAWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCA 618

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CS  G+V +G   F SM  +Y + P+   Y C+VD+L R+G LE+A   I+ MP +P P 
Sbjct: 619 CSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPA 678

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+ +LL+ CRIH + ELGE A+E +      +   ++LLS
Sbjct: 679 VWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLS 718



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 244/515 (47%), Gaps = 6/515 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           + L E  ++R  G++V+ ++        + L N L++M+ + G       VF  M +RNL
Sbjct: 113 IRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNL 172

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW ++V    + G FD  L +Y  M   G  P+ +    V++ C  M     G  IH  
Sbjct: 173 FSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVH 232

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            ++   E +  V  +++  Y K GDV  A  VF  + + D   WNAMI GY   G   E 
Sbjct: 233 VIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEG 292

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M+   +  D  T  + +  C L+ D  +GRQIHG ++R+E     SI N+LI M
Sbjct: 293 LRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPM 352

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y     ++ A  VF R   +D++SW  +  G+     P +    +      G  P+ +T 
Sbjct: 353 YSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITI 412

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           +I+L  C  L +LD+G+ L  +A   G +    V +SLI M+ +C  ++ A  +F +   
Sbjct: 413 AIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLE 472

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           KNI +W  ++ G   N    + L  F  +    ++ N  T   V+  C R        +I
Sbjct: 473 KNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEI 531

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE--FSNGAERLDMASWGAMMSALVHQG 528
           H   ++TG S  G++ ++++  YV  G+++ +++  FS   E   + SW  +++    +G
Sbjct: 532 HAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVDHE---VTSWNILLTGYAERG 588

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
               A  +F  +VE+   P+E    +IL +C+  G
Sbjct: 589 KGAHATELFQRMVESNVSPNEVTFISILCACSRSG 623



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 237/482 (49%), Gaps = 11/482 (2%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            A++ + SM    I ++   ++  ++ C        G +++  +  S    S+ + NAL+
Sbjct: 89  RAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALL 148

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            M+++   +  A+ VF RM  +++ SWN L GG+++     +   L+H+ +  G +P+  
Sbjct: 149 SMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVY 208

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +LR CG + +L  G ++    +  GF  + +V ++LI M+ +CG V  A  VFD +
Sbjct: 209 TFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKM 268

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  N    + L+ F  + +  V+ +  T   V+  C    + ++  
Sbjct: 269 PNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGR 328

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           QIHG +++T F     I +SLI  Y + G ++ +    +  E  D+ SW AM+S   +  
Sbjct: 329 QIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCL 388

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A+  +  +   G  PDE  +  +L++C+ +       ++H    + G  +   VA+
Sbjct: 389 MPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVAN 448

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++ID YAKC  I  A   F  +   N ++ + ++I+    +    EA+  F +M +  L+
Sbjct: 449 SLIDMYAKCKCIDKALEIFHSTLEKN-IVSWTSIILGLRINNRCFEALFFFREM-IRRLK 506

Query: 649 PSQATFVSVMSACSHKGLVDKGCLL----FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           P+  T V V+SAC+  G +  G  +     ++  S  G  P+      ++DM  R G +E
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPN-----AILDMYVRCGRME 561

Query: 705 DA 706
            A
Sbjct: 562 YA 563



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 173/381 (45%), Gaps = 4/381 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +   ++  E L    LG Q+HG++++  F  D  + N+LI MYS  G       VF
Sbjct: 307 DLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVF 366

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
                R+LVSWT ++S           L+ Y  M+  G MP+E  +  V+  C  +   +
Sbjct: 367 SRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLD 426

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G ++H  A +  +     V  S+++ YAK   +  A  +F+S    ++  W ++I G  
Sbjct: 427 MGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLR 486

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                FEAL     M+   +  +  T +  L  C+ +     G++IH   +R+ V     
Sbjct: 487 INNRCFEALFFFREMI-RRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGF 545

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++DMY++   M+YA+K F  + D +V SWN L  G++E         LF + + S 
Sbjct: 546 MPNAILDMYVRCGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESN 604

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             PN VTF  +L  C +   +  GL+    +      +      + ++ +  R G +E A
Sbjct: 605 VSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEA 664

Query: 402 HSVFDNVSYK-NITTWNELLS 421
           +     +  K +   W  LL+
Sbjct: 665 YEFIQKMPMKPDPAVWGALLN 685



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/292 (20%), Positives = 120/292 (41%), Gaps = 52/292 (17%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ + + L   LS    + +   G ++H H ++ G + D F+ N ++ MY +CG   +  
Sbjct: 505 LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAW 564

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F  + +  + SW ++++   + G+     +++  M  +   PNE    S++  C   G
Sbjct: 565 KQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSG 623

Query: 160 ----------ASEFGYSI-----------------------HCFALKIRIEKNPFVGCSV 186
                     + ++ YSI                       + F  K+ ++ +P V  ++
Sbjct: 624 MVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGAL 683

Query: 187 LN-----FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           LN      + +LG++ AAE +F    +  VG +  +   YA  G   +   V   M   G
Sbjct: 684 LNSCRIHHHVELGEL-AAENIFQD-DTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNG 741

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           + +D         GCS V   ++   +H  +        I  +NAL++ + K
Sbjct: 742 LIVDP--------GCSWV---EVKGTVHAFLSSDNFHPQIKEINALLERFYK 782


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 195/709 (27%), Positives = 343/709 (48%), Gaps = 13/709 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-------RNLVSWTL 115
           G  +HG +V LG+  D F+  +L+ MY KCG+  + ++VFD  ++       R++  W  
Sbjct: 79  GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--ASEFGYSIHCFALK 173
           ++    +   F  G+  +  M   G  P+ F++  V+ V    G    E G  IH F L+
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALN 232
             ++ + F+  ++++ Y K G    A RVF  I    +V  WN MI G+   G    +L+
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +        + +   +F  AL  CS   +   GRQIH  +++  +     +  +L+ MY 
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +  A  VF  + DK +  WN +   ++EN        LF         P+  T S 
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           ++  C  L   + G  +              + S+L+ ++ +CG    A+ VF ++  K+
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWES--GVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +  W  L+SG C N    + LK F ++ +    ++ +      V   C   E  +   Q+
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           HG++IKTG     ++ SSLI  Y   G  + + +        +M +W +M+S        
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             ++ +F+ ++  G  PD   + ++L + ++  +  + KS+H + ++LG  ++ ++ +A+
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNAL 618

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y KCG  K A   F +      +I +N +I  Y  HG    A+ +FD+MK A   P 
Sbjct: 619 IDMYVKCGFSKYAENIF-KKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF+S++SAC+H G V++G  +F+ M   YG++P+ + Y  +VD+L R G LE+A   I
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + MP +   +++  LLS  R H N ELG  ++EKLL + P+  + +V L
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQL 786



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/635 (24%), Positives = 292/635 (45%), Gaps = 8/635 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVS 118
           R  G Q+HG +++     D FL+  LI MY K G      RVF E+ ++ N+V W +++ 
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
               +G  +  L +Y+  K N       +    +  C     S FG  IHC  +K+ +  
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +P+V  S+L+ Y+K G V  AE VF  +    +  WNAM+  YA   YG+ AL++   M 
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            + +  D +T  N +  CS++  ++ G+ +H  + +  ++ + +I +AL+ +Y K     
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF--HKFILSGSRPNHVTFSILLRQ 356
            A+ VF+ M +KD+++W +L  G  +N    +   +F   K      +P+    + +   
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L  GLQ+    +  G +    V SSLI ++ +CG  EMA  VF ++S +N+  W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++S Y  N      +  F  +   G+  +  +   V+     + +      +HG  ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G  S  ++ ++LI  YV  G    +       +   + +W  M+      G    A+++
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYA 595
           F  + +AGE PD+    +++++C   G  +  K+I  F+ +  G    +   + ++D   
Sbjct: 666 FDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLG 725

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATF 654
           + G ++ A           D  ++  L+ A   H  V   + I    KL  ++P + +T+
Sbjct: 726 RAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTY 783

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           V +++     GL ++   L   M  + G+   P C
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEK-GLHKQPGC 817



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 163/632 (25%), Positives = 297/632 (46%), Gaps = 18/632 (2%)

Query: 117 VSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           + A IQ GE+   L +Y     ++ F  + F   S++K C ++    +G +IH   + + 
Sbjct: 31  IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVF-------YSISSDDVGCWNAMIGGYAHCGYGF 228
              +PF+  S++N Y K G +  A +VF         +S+ DV  WN+MI GY       
Sbjct: 91  WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIVNA 286
           E +     ML  G+  D ++    +       +F  + G+QIHG ++R+ ++    +  A
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTA 210

Query: 287 LIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           LIDMY K      A++VF  + DK +V+ WN +  GF  +     +  L+     +  + 
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKL 270

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
              +F+  L  C +  +   G Q+ C  +  G  ++  V +SL+ M+ +CG V  A +VF
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
             V  K +  WN +++ Y  N      L  F  + +  V  +  T   V+ +CC      
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI-SCCSVLGLY 389

Query: 466 MVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
             G+ +H  + K    S   I S+L+  Y   G   +++      E  DM +WG+++S L
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449

Query: 525 VHQGHNHEAVTIFHSLVEAGE--KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
              G   EA+ +F  + +  +  KPD  I+ ++ N+CA + A +    +H  +IK G   
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            V+V S++ID Y+KCG  + A   F  S ++ +++ +N++I  Y+ + L   ++++F+ M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVF-TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
               + P   +  SV+ A S    + KG  L      + G+         L+DM  + G+
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYVKCGF 627

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            + A+++ + M  + S   +  ++ G   HG+
Sbjct: 628 SKYAENIFKKMQHK-SLITWNLMIYGYGSHGD 658



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 12/295 (4%)

Query: 25  IHRLCGNNQFCS-----------DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL 73
           I  LC N +F             D  L+ D   +    +    L++   G QVHG ++K 
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           G   ++F+ ++LI +YSKCG     L+VF  M+  N+V+W  ++S   +N   ++ + ++
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             M + G  P+  ++ SV+    S  +   G S+H + L++ I  +  +  ++++ Y K 
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKC 625

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G    AE +F  +    +  WN MI GY   G    AL++   M   G + D  TF++ +
Sbjct: 626 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLI 685

Query: 254 QGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERM 307
             C+     + G+ I   + +   +E ++     ++D+  ++  ++ A+   + M
Sbjct: 686 SACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 25/215 (11%)

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP---DEYILGTILNSCAAIGAYQRTKSI 571
           AS  + + AL+ +G   +A+ ++      G  P     +   ++L +C+A+      K+I
Sbjct: 25  ASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD------QSFNSNDVIVYNTLIMA 625
           H  V+ LG+  + ++A+++++ Y KCG +  A   FD         ++ DV V+N++I  
Sbjct: 83  HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK-------GCLLFKSMD 678
           Y       E +  F +M +  ++P   +   V+S    +G   +       G +L  S+D
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD 202

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV-IEI 712
           +   ++ +      L+DM  + G   DA  V +EI
Sbjct: 203 TDSFLKTA------LIDMYFKFGLSIDAWRVFVEI 231


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 190/631 (30%), Positives = 308/631 (48%), Gaps = 26/631 (4%)

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           R+  SW   +    ++  F   +  YVDM  +G  P+ +A   V+K    +     G  I
Sbjct: 40  RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99

Query: 168 HCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           H   +K   E +   +  S++NFY K  ++    +VF  I+  D+  WN++I  +     
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQE 159

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLIIRSEVECSISI 283
              AL     ML E +    +T ++ +  CS +   +   +G+QIHG   R+    S   
Sbjct: 160 WELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFT 218

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+ MY     +D A  +F+   D+++ISWNT+   FS+N+   +        +L G 
Sbjct: 219 NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGV 278

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAH 402
           +P+ VT + +L  C  L  L  G ++   AL  G L E + V S+L+ M+C CG V    
Sbjct: 279 KPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGR 338

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRS 461
            VFD +  +    WN +++GY  N  D   L  F   +  +G+  N  T   +V    R 
Sbjct: 339 RVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARC 398

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E+      IHG +IK       Y+ ++L+  Y    +++ S    +  E  D+ SW  M+
Sbjct: 399 ESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMI 458

Query: 522 SALVHQGHNHEAVTIFHSLVEAGE-------------KPDEYILGTILNSCAAIGAYQRT 568
           +  V  G  ++A+ + H +  A E             KP+   L T+L  CA++ A  + 
Sbjct: 459 TGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKG 518

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K IH + ++    +EV V SA++D YAKCG +  +R  FDQ    N VI +N ++MAY  
Sbjct: 519 KEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKN-VITWNVIVMAYGM 577

Query: 629 HGLVSEAMEIFDKM-----KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
           HG   EA+E+F  M      +  ++P++ T +++++ACSH G+VD+G  LF  M   +G+
Sbjct: 578 HGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGI 637

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +P PD Y C+ D+L R G +E A   I  MP
Sbjct: 638 EPGPDHYACVADLLGRAGKVEQAYDFINTMP 668



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/526 (23%), Positives = 240/526 (45%), Gaps = 25/526 (4%)

Query: 62  LGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG Q+H H+VK G+ ++ + + N+L+  Y KC       +VFD + ER+LVSW  ++SA 
Sbjct: 95  LGKQIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAF 154

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFALKIRIE 177
            +  E+++ L+ +  M      P+ F + S +  C ++   E    G  IH +  +    
Sbjct: 155 CRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFR-NGH 213

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + F   +++  YA LG +  A+ +F      ++  WN MI  ++      EAL  +  M
Sbjct: 214 WSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYM 273

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSG 296
           + EG+  D  T  + L  CS +     G++IH   +RS      S V +AL+DMY     
Sbjct: 274 VLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQ 333

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLR 355
           +    +VF+ + ++    WN +  G+++N++  +   LF + + ++G  PN  T + ++ 
Sbjct: 334 VGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVP 393

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
              +         +    +      +  V ++L+ M+ R   +E++ ++FD++  ++I +
Sbjct: 394 ASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVS 453

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESG-------------VEVNGCTFFYVVETCCRSE 462
           WN +++GY  + C  D L     +  +               + N  T   V+  C    
Sbjct: 454 WNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLA 513

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
                 +IH   ++   +S   + S+L+  Y   G L+ S    +     ++ +W  ++ 
Sbjct: 514 ALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVM 573

Query: 523 ALVHQGHNHEAVTIFHSLVEAGE-----KPDEYILGTILNSCAAIG 563
           A    G+  EA+ +F  +V  G+     KP E  +  IL +C+  G
Sbjct: 574 AYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSG 619



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/544 (24%), Positives = 253/544 (46%), Gaps = 26/544 (4%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNAL 287
           EA++    M+  G++ D Y F   L+  + + D ++G+QIH  +++   E S ++I N+L
Sbjct: 60  EAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSL 119

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ++ Y K S +D  +KVF+R+ ++D++SWN+L   F   +        F   +     P+ 
Sbjct: 120 VNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSS 179

Query: 348 VTFSILLRQCGKLLD---LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            T    +  C  L     L LG Q+       G        ++L+ M+   G ++ A  +
Sbjct: 180 FTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHW-STFTNNALMTMYANLGRLDDAKFL 238

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F     +N+ +WN ++S +  N    + L +   +   GV+ +G T   V+  C   E  
Sbjct: 239 FKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEML 298

Query: 465 QMVGQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
               +IH   +++G      ++ S+L+  Y N GQ+ +     +G        W AM++ 
Sbjct: 299 GTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAG 358

Query: 524 LVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                H+ +A+ +F  +V  AG  P+   + +I+ + A   ++   +SIH +VIK     
Sbjct: 359 YAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLER 418

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           + YV +A++D Y++   ++ ++  FD S    D++ +NT+I  Y   G  ++A+ +  +M
Sbjct: 419 DRYVQNALMDMYSRMRKMEISKTIFD-SMEVRDIVSWNTMITGYVISGCYNDALLMLHEM 477

Query: 643 KLAN-------------LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           + AN              +P+  T ++V+  C+    + KG  +  +   +  +      
Sbjct: 478 QHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEI-HAYAVRNALASEVTV 536

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
              LVDM ++ G L  ++ V + MP +   T +  ++    +HGN   GE A E    ++
Sbjct: 537 GSALVDMYAKCGCLNLSRRVFDQMPIKNVIT-WNVIVMAYGMHGN---GEEALELFKDMV 592

Query: 750 PKND 753
            K D
Sbjct: 593 AKGD 596



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 18/221 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG+++K     D ++QN L+ MYS+         +FD M  R++VSW  +++  + +G 
Sbjct: 407 IHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGC 466

Query: 126 FDMGLKMYVDM--------KTNG-----FMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           ++  L M  +M        K +G     F PN   + +V+  C S+ A   G  IH +A+
Sbjct: 467 YNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAV 526

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +  +     VG ++++ YAK G +  + RVF  +   +V  WN ++  Y   G G EAL 
Sbjct: 527 RNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALE 586

Query: 233 VVSSMLFEG-----ITMDKYTFINALQGCSLVADFDIGRQI 268
           +   M+ +G     +   + T I  L  CS     D G ++
Sbjct: 587 LFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKL 627



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 10/191 (5%)

Query: 25  IHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN 84
           I++  G+ Q C     + + I L   L    +L +   G ++H + V+    +++ + + 
Sbjct: 484 INKHDGDKQAC----FKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSA 539

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG---- 140
           L+ MY+KCG      RVFD+M  +N+++W +IV A   +G  +  L+++ DM   G    
Sbjct: 540 LVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVG 599

Query: 141 -FMPNEFAVGSVMKVCVSMGASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
              P E  + +++  C   G  + G  + H       IE  P     V +   + G V  
Sbjct: 600 EVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQ 659

Query: 199 AERVFYSISSD 209
           A     ++ SD
Sbjct: 660 AYDFINTMPSD 670


>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
          Length = 836

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 192/721 (26%), Positives = 352/721 (48%), Gaps = 58/721 (8%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF---MPN 144
           MY + G       VFDEM+  + V   ++++A+ + G ++    ++  M  +G    MP 
Sbjct: 3   MYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPT 62

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA---AER 201
              V  V+ VC  +     G SIH + +K  +E +   G ++++ YAK G   A   A  
Sbjct: 63  AVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHL 122

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA- 260
            F +I   DV  WN++I GY+  G   EAL +   M+ E    +  T  N L  CSLV  
Sbjct: 123 AFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEY 182

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               G++IHG ++R  +E  IS+ NAL+  Y K   M     +F      D+++WNT+  
Sbjct: 183 GRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIA 242

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFL 379
           G+  N+ P +   LF   + +G  P+ V+   LL  C ++ +L +G+++      H   L
Sbjct: 243 GYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELL 302

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-----VLK 434
            E ++ ++L+  + +C   + A   F  +  K+  +WN +LS     C +++       +
Sbjct: 303 QETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSA----CANSEHHIEQFFR 358

Query: 435 TFCNIWESGVEVNGCTFFYVVE--TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
               +W    + +  T   ++   T C     +MV + HG  ++ G++    + ++++ +
Sbjct: 359 LLGEMWHDVTQWDSVTILNIIRMSTFC---GIKMVQESHGYSLRVGYTGDSSVANAILDA 415

Query: 493 YVNFGQL--------------------------------DNSFEFSNGAERLDMASWGAM 520
           Y   G L                                D    F++ AE+ D+ +W  M
Sbjct: 416 YAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEK-DLTTWNLM 474

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
                      +A  +FH L   G  PD   +  IL++C  + + Q  K  H ++++   
Sbjct: 475 SRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL 534

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             ++++  A++DAY+KCG+I  A   F  S +  D++++  +I AYA HG+  +A+E+F 
Sbjct: 535 E-DIHLEGALLDAYSKCGNIANAYNLFQVSLH-KDLVIFTAMIGAYAMHGMAEKAVELFS 592

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM   +++P      +++SACSH GLVD G  +FKS+   YG++P+ +   C+VD+L+R+
Sbjct: 593 KMLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARS 652

Query: 701 GYLEDA-KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           G L+DA    +++ P   +   + SLL  C++HG  ++G+ A+++L  +  ++   +V++
Sbjct: 653 GRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIM 712

Query: 760 S 760
           S
Sbjct: 713 S 713



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 152/645 (23%), Positives = 292/645 (45%), Gaps = 53/645 (8%)

Query: 44  PIFLAKSLSLSENLKSRVL--GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG---YFGWG 98
           P  +  ++ L    K RVL  G  +HG+++K G   D    N L++MY+KCG        
Sbjct: 61  PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC--V 156
              F  +  +++VSW  I++   +NG F+  L ++  M +   +PN   + +V+  C  V
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G   +G  IH F ++  +E +  V  +++  Y+K+ ++ A E +F S    D+  WN 
Sbjct: 181 EYG-RHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNT 239

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-S 275
           +I GY    Y   AL +   +LF G+  D  + I+ L  C+ V +  +G ++HG I R  
Sbjct: 240 VIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHP 299

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP-GQTASL 334
           E+    S++NAL+  Y +    D AF+ F  + +KD +SWN +    + +++   Q   L
Sbjct: 300 ELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQFFRL 359

Query: 335 FHKFILSGSRPNHVTFSILLRQ---CG-KLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +     ++ + VT   ++R    CG K++    G  L+      G+  + +V ++++ 
Sbjct: 360 LGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLR-----VGYTGDSSVANAILD 414

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE--------- 441
            + +CG +  A ++F +++ +NI T N ++S Y  N C  D   TF ++ E         
Sbjct: 415 AYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLM 474

Query: 442 ----------------------SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
                                  G+  +  +   ++  C    + Q+V Q HG +++   
Sbjct: 475 SRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL 534

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               ++  +L+ +Y   G + N++     +   D+  + AM+ A    G   +AV +F  
Sbjct: 535 EDI-HLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFSK 593

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCG 598
           ++    KPD  +L  +L++C+  G       I   + ++ G        + ++D  A+ G
Sbjct: 594 MLTLDIKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSG 653

Query: 599 DIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            ++ A   A D   +  +   + +L+ A   HG V       D++
Sbjct: 654 RLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRL 698



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/458 (21%), Positives = 193/458 (42%), Gaps = 28/458 (6%)

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG---SR 344
           +DMY +   +  A  VF+ M+  D +  N L    S          LF   + SG   S 
Sbjct: 1   MDMYGRIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 60

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG---AVEMA 401
           P  VT +++L  C KL  L  G  +    +  G   +    ++L+ M+ +CG   A++ A
Sbjct: 61  PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 120

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           H  F  +  K++ +WN +++GY  N    + L  F  +       N  T   V+  C   
Sbjct: 121 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180

Query: 462 ENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           E  +  G +IHG +++ G      + ++L+  Y    ++         ++  D+ +W  +
Sbjct: 181 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LG 579
           ++  V   +   A+ +F  L+ AG  PD   L ++L +CA +G  +    +H ++ +   
Sbjct: 241 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPE 300

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA---HHGLVSEAM 636
              E  + +A++  Y++C     A  +F  +  + D + +N ++ A A   HH  + +  
Sbjct: 301 LLQETSLMNALVSFYSQCDRFDAAFRSF-ITIQNKDSVSWNAILSACANSEHH--IEQFF 357

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +  +M     Q    T ++++   +  G+  K          + G          ++D 
Sbjct: 358 RLLGEMWHDVTQWDSVTILNIIRMSTFCGI--KMVQESHGYSLRVGYTGDSSVANAILDA 415

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            ++ GYL DA+            T++RSL     + GN
Sbjct: 416 YAKCGYLHDAE------------TLFRSLAGRNIVTGN 441



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 11/157 (7%)

Query: 21  TRKRIHRLCGNNQFCSDSF----------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHI 70
           T   + RL   N  C  +F          L  D I +   LS   +L S  L  Q HG++
Sbjct: 470 TWNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYM 529

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGL 130
           ++     DI L+  L+  YSKCG       +F     ++LV +T ++ A   +G  +  +
Sbjct: 530 LRASL-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAV 588

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           +++  M T    P+   + +++  C   G  + G  I
Sbjct: 589 ELFSKMLTLDIKPDHVVLTALLSACSHAGLVDAGIKI 625


>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
 gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
          Length = 564

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 169/577 (29%), Positives = 302/577 (52%), Gaps = 21/577 (3%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKY 247
            Y K G V  A  VF SI       WN M+G Y + G G +AL +   M+   GI  D+ 
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF+ A   CSLV   + G+Q H   + S +E S+ + +AL++MY +    + A K+F+R+
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC----GKLLDL 363
             K+V+ WN +   +++N +  +   L++   L   +P+ VTF  +L  C    G+L+  
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDMNL---KPDRVTFLNVLHACTLESGRLIHQ 177

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           D+        +  G   ++ V ++L+ MF +CG++  A  VFD ++++++ +WN L+S Y
Sbjct: 178 DV--------VSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVY 229

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  +  + F  + ++G++ N  T+  ++  C   E  +   +IH  +   G     
Sbjct: 230 IQQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLR---EIHQELADQGLEQDE 286

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++LI +Y  F  L++S       +R  + SW  M+  +V  G+   A+ ++  +V  
Sbjct: 287 QVGNTLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVE 345

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PD   L   L++C ++      + IH  V      T+V+VA+AV++ Y KCG    A
Sbjct: 346 GVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEA 405

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F Q   +  V  +N+LI AYA HG  ++A++++++M+L+  +P   T +  + ACSH
Sbjct: 406 EAVF-QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSH 464

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GL+D+    +  M   Y ++  P  +GCLVD+  R G++++A+ +I  MP +P  + + 
Sbjct: 465 LGLLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWT 524

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ C+ H + E G WA+ K   L  +  +  V+LS
Sbjct: 525 ALLNACKAHNDMERGAWAACKAHELDSRRSSPFVVLS 561



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/519 (24%), Positives = 240/519 (46%), Gaps = 15/519 (2%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEF 146
           MY KCG       VF+ +   +  SW L++ A   NG  D  L+++  M   +G   +  
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
              +    C  +G+ E G   H   ++  +E +  +  +++N Y + G    A ++F  I
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +V CWN MI  YA  G+  EAL +   M    +  D+ TF+N L  C+L    + GR
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACTL----ESGR 173

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            IH  ++ + +E    + NAL++M+ K   +  A +VF+R+A +DVISWN L   + +  
Sbjct: 174 LIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQG 233

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +  +   LF +   +G +PN VT+  LL  C  L  L    ++       G   +E V +
Sbjct: 234 HRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLR---EIHQELADQGLEQDEQVGN 290

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI  + +  ++E + +VF+ +  +++ +W  ++ G   +      L  +  +   GV  
Sbjct: 291 TLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRP 349

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +       ++ C   EN     +IH  +  T   +  ++ ++++  Y   G+   +    
Sbjct: 350 DAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVF 409

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
            G +   +A+W +++ A    GH  +A+ ++  +  +G +PD   L   L +C+ +G   
Sbjct: 410 QGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLGLLD 469

Query: 567 RTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGA 603
           R +  +  +++  +  E   A    ++D + + G I  A
Sbjct: 470 RAREFYSGMVE-DYQVEAVPAHFGCLVDLFCRAGWIDEA 507



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 198/419 (47%), Gaps = 11/419 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +    + +    + S   G Q H   V+ G  + + L + L+ MY +CG      
Sbjct: 55  IRADRVTFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEAR 114

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD +  +N+V W ++++A  QNG F   L++Y DM      P+     +V+  C    
Sbjct: 115 KIFDRIPVKNVVCWNVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACT--- 168

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  IH   +   +E++ FVG +++N + K G ++ A+RVF  I+  DV  WNA++ 
Sbjct: 169 -LESGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMS 227

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y   G+  EA  +   M   G+  +  T+++ L  CS +      R+IH  +    +E 
Sbjct: 228 VYIQQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQL---REIHQELADQGLEQ 284

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
              + N LI  Y K S ++ +  VFERM  + V+SW  +  G  E+   G+   L+ + +
Sbjct: 285 DEQVGNTLITAYNKFS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMV 343

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           + G RP+ V     L  C  + +L  G ++  L      + +  V ++++ M+ +CG   
Sbjct: 344 VEGVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFA 403

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A +VF  +    + TWN L+  Y  +    D LK +  +  SG   +G T    +  C
Sbjct: 404 EAEAVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFAC 462



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 176/377 (46%), Gaps = 25/377 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +V  G   D F+ N L+ M+ KCG      RVFD +A R+++SW  ++S  IQ
Sbjct: 172 GRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQ 231

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G      +++  M   G  PN     S++  C S+   E    IH       +E++  V
Sbjct: 232 QGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSL---EQLREIHQELADQGLEQDEQV 288

Query: 183 GCSVLNFYAK--LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           G +++  Y K  L D  A   VF  +    V  W  MI G    GYG  AL++   M+ E
Sbjct: 289 GNTLITAYNKFSLEDSVA---VFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVE 345

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D    + AL  C+ V +   GR+IH L+  + +   + +  A+++MY K      A
Sbjct: 346 GVRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEA 405

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M    V +WN+L G ++++ +      L+ +  LSG+RP+ VT    L  C   
Sbjct: 406 EAVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSH- 464

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTS------SLIYMFCRCGAVEMAHSVFDNVSYK-NI 413
               LGL  +    + G +++  V +       L+ +FCR G ++ A  +  ++  + +I
Sbjct: 465 ----LGLLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHI 520

Query: 414 TTWNELLSGYCFNCCDA 430
           + W  LL     N C A
Sbjct: 521 SAWTALL-----NACKA 532



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 10/185 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + L  +L    ++++   G ++H  +       D+F+   ++ MY KCG F    
Sbjct: 347 VRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAE 406

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF  M    + +W  ++ A  Q+G     LK+Y  M+ +G  P+   +   +  C  +G
Sbjct: 407 AVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLG 466

Query: 160 ----ASEFGYSIHCFALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
               A EF YS        ++E  P   GC +++ + + G +  AE +  S+     +  
Sbjct: 467 LLDRAREF-YS--GMVEDYQVEAVPAHFGC-LVDLFCRAGWIDEAEELIASMPVRPHISA 522

Query: 214 WNAMI 218
           W A++
Sbjct: 523 WTALL 527


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 170/562 (30%), Positives = 287/562 (51%), Gaps = 1/562 (0%)

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           AER+F+ +   +   WNA++ GYA  G G + L +   M        K+T    L+GC+ 
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
                 G+ +H L +RS  E    +  +L+DMY K   +  A KVF ++ + DV++W+ +
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G  +  +  + A LFH     G+RPN  T S L+     + DL  G  +       GF
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V++ LI M+ +   VE  + VF+ ++  ++ +WN LLSG+  +       + F  
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   G + N  TF  V+ +C    + +   Q+H  IIK       ++ ++L+  Y     
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           L+++    +     D+ SW  ++S         +AV  F  +   G KP+EY L + L+ 
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           C+ +   +  + +H   +K G   +++V SA++D Y KCG ++ A   F +   S D++ 
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF-KGLISRDIVS 422

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +NT+I  Y+ HG   +A+E F  M    + P +ATF+ V+SACS  GLV++G   F SM 
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             YG+ PS + Y C+VD+L R G   + K  IE M   P   ++ ++L  C++HGN + G
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
           E A++KL  + P  D++++LLS
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLS 564



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/615 (26%), Positives = 290/615 (47%), Gaps = 38/615 (6%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F  M E+N VSW  +++   Q G+    LK++  MK      ++F + +V+K C + G
Sbjct: 6   RLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTG 65

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  +H  AL+   E + F+GCS+++ Y+K G V  A +VF  I + DV  W+AMI 
Sbjct: 66  SLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMIT 125

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G    G+G EA  +   M  +G   +++T  + +   + + D   G+ IHG I +   E 
Sbjct: 126 GLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFES 185

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
              + N LI MY+KS  ++   KVFE M + D++SWN L  GF +++  G+   +F++ +
Sbjct: 186 DNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQML 245

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G +PN  TF  +LR C  LLD + G Q+    +     D++ V ++L+ M+ +   +E
Sbjct: 246 LEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLE 305

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A   FD +  ++I +W  ++SGY         +K F  +   G++ N  T    +  C 
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCS 365

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                +   Q+H   +K G     ++ S+L+  Y   G ++++     G    D+ SW  
Sbjct: 366 HMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNT 425

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++S     G   +A+  F  ++  G  PDE     +L++C+ +G  +  K       +  
Sbjct: 426 IISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKK------RFD 479

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
             +++Y  +  I+ YA   DI G    F      N+V ++                    
Sbjct: 480 SMSKIYGINPSIEHYACMVDILGRAGKF------NEVKIF-------------------- 513

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD-CYGCLVDMLS 698
             ++  NL P    + +V+ AC   G VD G    K+    + M+P  D  Y  L ++ +
Sbjct: 514 --IEEMNLTPYSLIWETVLGACKLHGNVDFG---EKAAKKLFEMEPMMDSSYILLSNIFA 568

Query: 699 RNGYLEDAKHVIEIM 713
             G  +D +++  +M
Sbjct: 569 SKGRWDDVRNIRALM 583



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   ++ G   D FL  +L+ MYSKCG     L+VF ++   ++V+W+ +++   Q
Sbjct: 70  GKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQ 129

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G      +++  M+  G  PN+F + S++    +MG   +G SIH    K   E +  V
Sbjct: 130 QGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLV 189

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY---AHCGYGFEALNVVSSMLF 239
              ++  Y K   V    +VF ++++ D+  WNA++ G+     CG G     +   ML 
Sbjct: 190 SNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRG---PRIFYQMLL 246

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG   + +TFI+ L+ CS + D + G+Q+H  II++  +    +  AL+DMY K+  ++ 
Sbjct: 247 EGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLED 306

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+R+ ++D+ SW  +  G+++     +    F +    G +PN  T +  L  C  
Sbjct: 307 AGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSH 366

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           +  L+ G QL  +A+  G   +  V S+L+ ++ +CG +E A ++F  +  ++I +WN +
Sbjct: 367 MATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTI 426

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +SGY  +      L+ F  +   G+  +  TF  V+  C
Sbjct: 427 ISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSAC 465



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 161/317 (50%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R +   L+  +S + N+     G  +HG I K GF +D  + N LI MY K      G +
Sbjct: 149 RPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNK 208

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+ M   +LVSW  ++S    +     G +++  M   GF PN F   SV++ C S+  
Sbjct: 209 VFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLD 268

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            EFG  +H   +K   + + FVG ++++ YAK   +  A   F  + + D+  W  +I G
Sbjct: 269 PEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISG 328

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA      +A+     M  EGI  ++YT  + L GCS +A  + GRQ+H + +++     
Sbjct: 329 YAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGD 388

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I + +AL+D+Y K   M++A  +F+ +  +D++SWNT+  G+S++    +    F   + 
Sbjct: 389 IFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLS 448

Query: 341 SGSRPNHVTFSILLRQC 357
            G  P+  TF  +L  C
Sbjct: 449 EGIMPDEATFIGVLSAC 465



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 212/455 (46%), Gaps = 6/455 (1%)

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M+ A ++F  M +K+ +SWN L  G+++  +  +   LF K     ++ +  T S +L+ 
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C     L  G  L  LAL  G   +E +  SL+ M+ +CG V  A  VF  +   ++  W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + +++G        +  + F  +   G   N  T   +V T     + +    IHG I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            GF S   + + LI  Y+    +++  +        D+ SW A++S             I
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F+ ++  G KP+ +   ++L SC+++   +  K +H  +IK   + + +V +A++D YAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
              ++ A +AFD+  N  D+  +  +I  YA      +A++ F +M+   ++P++ T  S
Sbjct: 301 ARCLEDAGVAFDRLVN-RDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            +S CSH   ++ G  L  ++  + G          LVD+  + G +E A+ + + +   
Sbjct: 360 CLSGCSHMATLENGRQL-HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL-IS 417

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
                + +++SG   HG    GE A E   ++L +
Sbjct: 418 RDIVSWNTIISGYSQHGQ---GEKALEAFRMMLSE 449



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 63/125 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +   LA  LS   ++ +   G Q+H   VK G   DIF+ + L+ +Y KCG      
Sbjct: 350 IKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAE 409

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  R++VSW  I+S   Q+G+ +  L+ +  M + G MP+E     V+  C  MG
Sbjct: 410 AIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMG 469

Query: 160 ASEFG 164
             E G
Sbjct: 470 LVEEG 474


>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
 gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
          Length = 734

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/685 (26%), Positives = 332/685 (48%), Gaps = 16/685 (2%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS   G ++H  + + G   D +L NNLI MY  CG  G    +FD++ +RN+ SWT+++
Sbjct: 17  KSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLIDRNVYSWTIML 76

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           SA  QNG +   L +   M   G  PN      ++  C ++G  E G  IH   + +  +
Sbjct: 77  SAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWD 136

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V  ++L  Y+K   +  A+++F S+   DV  W A+I  ++  G    AL +   M
Sbjct: 137 TDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEM 196

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             +G+  ++ TF+N L  C+ +   + G +++   I       + + +  + MY +   +
Sbjct: 197 DLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNL 256

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A   F+ + +K   SWN +   + ++ +  Q  SL+ +  + G+ P+  T   LL  C
Sbjct: 257 VEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGAC 316

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEEN--VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             L  L+ G +     +H    D+ +    S+++ M+ +CG +E A + F  +S  N+  
Sbjct: 317 SSLGALEEGER-----IHARMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVV 371

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN L++GY       + L  +  +   G+E +  TF  V+  C  +++      +H  I+
Sbjct: 372 WNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIV 431

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G      + + L+  +   G L  + E   G    +  SW +M++A    G    A  
Sbjct: 432 SRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFE 491

Query: 536 IFHSLVEAGEKPDEYILGTILNSC--AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           +F  ++  G +P E    +ILN C  +A  +  + K++H  +   G +++  VA+ ++  
Sbjct: 492 LFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITASGVDSDPTVATCLLTM 551

Query: 594 Y-----AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           Y     AKCG +  AR  FD      +V+ +  +I+ YA H     A+E+F +M+L  +Q
Sbjct: 552 YLLNALAKCGALDDARAVFD-GIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQ 610

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
             + TF S++ ACSH+GLV  G   F+SM   + + PS + Y  ++DML+R G + +A+ 
Sbjct: 611 ADEITFTSILHACSHRGLVRVGREYFRSMVEDHAIAPSAEHYNVVMDMLARAGRVGEAEE 670

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHG 733
           V ++ P         +L+S  ++HG
Sbjct: 671 VAKVFP-AIKHVALMTLVSSSQVHG 694



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 270/570 (47%), Gaps = 12/570 (2%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           G +++ C    +   G  IH    +  ++K+ ++G +++  Y   G V  A  +F  +  
Sbjct: 7   GRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREIFDKLID 66

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W  M+  YA  G+  EAL +   M  EGI  +  TF+  L  CS + D + GR+I
Sbjct: 67  RNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDVETGRKI 126

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  ++    +    +  A++ MY K   +  A K+F+ +  KDV+SW  +   FS+   P
Sbjct: 127 HARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAFSQLGRP 186

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                LF +  L G +PN  TF  +L  C  +  L+ G +L   A+ CG+  +  V S+ 
Sbjct: 187 RVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADVFVGSTA 246

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ R G +  A + FD++  K+  +WN ++  Y  +   +  L  +  +   G E + 
Sbjct: 247 VTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDT 306

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            T   ++  C      +   +IH    + G    G   S+++  Y   G ++++      
Sbjct: 307 FTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHAMTAFTK 363

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               ++  W A+++  V   H  EA+ ++H++   G + D Y   ++L +C+        
Sbjct: 364 MSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDLSEG 423

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           +++H  ++  G    V + + +++ +AKCG +  A   F +   S + + +N+++ A+  
Sbjct: 424 RAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMF-RGMASRNTVSWNSMVTAFCQ 482

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL--VDKGCLLFKSMDSQYGMQPS 686
           HG    A E+F +M L   +P + TF S+++ CSH     +D+G  L + + +  G+   
Sbjct: 483 HGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSACSSLDQGKALHQRITAS-GVDSD 541

Query: 687 PDCYGCLVDM-----LSRNGYLEDAKHVIE 711
           P    CL+ M     L++ G L+DA+ V +
Sbjct: 542 PTVATCLLTMYLLNALAKCGALDDARAVFD 571



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 146/606 (24%), Positives = 277/606 (45%), Gaps = 20/606 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + +     L    NL     G ++H  +V LG+  D  +   ++ MYSKC   G   
Sbjct: 100 IRPNSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAK 159

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD +  +++VSWT I++A  Q G   + L+++ +M  +G  PNE    +++  C  M 
Sbjct: 160 KIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMD 219

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A E G  ++  A+      + FVG + +  Y++ G++  A+  F  +     G WNA++ 
Sbjct: 220 ALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVR 279

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y   G+  +AL++   M   G   D +T +  L  CS +   + G +IH  +       
Sbjct: 280 AYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGACSSLGALEEGERIHARMGDKPDGL 339

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           + S   A++ MY K  G+++A   F +M+  +V+ WN L  G+ + ++  +   L+H   
Sbjct: 340 AGS---AIVAMYAKCGGIEHAMTAFTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMN 396

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G   +  TFS +L  C    DL  G  +    +  G      + + L+ MF +CG++ 
Sbjct: 397 LEGLEADIYTFSSVLGACSGAKDLSEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLT 456

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC- 458
           +A  +F  ++ +N  +WN +++ +C +       + F  +   G E +  TF  ++  C 
Sbjct: 457 LALEMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCS 516

Query: 459 ---CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV-----NFGQLDNSFEFSNGAE 510
              C S +Q     +H  I  +G  S   + + L+  Y+       G LD++    +G  
Sbjct: 517 HSACSSLDQGKA--LHQRITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIR 574

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             ++ SW AM+           A+ +F  +   G + DE    +IL++C+  G  +  + 
Sbjct: 575 GKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGLVRVGRE 634

Query: 571 IHPFVIK---LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
               +++   +  + E Y  + V+D  A+ G + G      + F +   +   TL+ +  
Sbjct: 635 YFRSMVEDHAIAPSAEHY--NVVMDMLARAGRV-GEAEEVAKVFPAIKHVALMTLVSSSQ 691

Query: 628 HHGLVS 633
            HG+ S
Sbjct: 692 VHGVDS 697



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 242/491 (49%), Gaps = 6/491 (1%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           MD  ++   L+ C L      G +IH  +  S V+    + N LI MY     +  A ++
Sbjct: 1   MDSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREI 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+++ D++V SW  +   +++N +  +   L ++  L G RPN VTF  +L  C  L D+
Sbjct: 61  FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLGDV 120

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G ++    +  G+  +  V+++++ M+ +C  +  A  +FD++  K++ +W  +++ +
Sbjct: 121 ETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIITAF 180

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                    L+ F  +   GV+ N  TF  ++  C   +  +   +++   I  G+ +  
Sbjct: 181 SQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMDALEDGDKLYKRAISCGYGADV 240

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ S+ +  Y  FG L  +    +        SW A++ A +  GH  +A++++  +   
Sbjct: 241 FVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVH 300

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PD +    +L +C+++GA +  + IH    ++G   +    SA++  YAKCG I+ A
Sbjct: 301 GAEPDTFTHVCLLGACSSLGALEEGERIHA---RMGDKPDGLAGSAIVAMYAKCGGIEHA 357

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AF +  +S++V+V+N LI  Y       EA++++  M L  L+    TF SV+ ACS 
Sbjct: 358 MTAFTK-MSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSG 416

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
              + +G  +   + S+ G++        LV+M ++ G L  A  +   M  + + + + 
Sbjct: 417 AKDLSEGRAVHARIVSR-GLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVS-WN 474

Query: 724 SLLSGCRIHGN 734
           S+++    HG+
Sbjct: 475 SMVTAFCQHGD 485


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 209/718 (29%), Positives = 362/718 (50%), Gaps = 23/718 (3%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR-VFDEMAERNLVSWTLIVSAA 120
            LG Q+HG I K  + +D+ + N LI+MY  C       R VFD +  RN +SW  I+S  
Sbjct: 665  LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVY 724

Query: 121  IQNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
             + G+      ++  M+  G    F PNE+  GS++    S  + +FG  +    +  R+
Sbjct: 725  SRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACS--SVDFGLCV-LEQMLARV 781

Query: 177  EKNPF-----VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
            EK+ F     VG ++++ +A+ G    A+ +F  +   +V   N ++ G      G  A 
Sbjct: 782  EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 841

Query: 232  NVVSSML-FEGITMDKYT-FINALQGCSLVAD-FDIGRQIHGLIIRSEV-ECSISIVNAL 287
             V   M    GI  D Y   ++A    S++ +    GR++H  +IR+ + +  ++I N L
Sbjct: 842  KVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 901

Query: 288  IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
            ++MY KS  +  A  VFE M +KD +SWN+L  G  +N+     A  F +   +GS P++
Sbjct: 902  VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSN 961

Query: 348  VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
             T    L  C  L  + LG Q+ C  L  G   + +V+++L+ ++   G       VF  
Sbjct: 962  FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021

Query: 408  VSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +   +  +WN ++     +    +  +K F  +   G  ++  TF  ++         ++
Sbjct: 1022 MPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEV 1081

Query: 467  VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALV 525
              QIH  ++K   S    I ++L+  Y   G+++   + F+  +E  D  SW +M+S  +
Sbjct: 1082 SHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYI 1141

Query: 526  HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            H    H+A+ +   +++ G++ D +   T+L++CA++   +R   +H   I+    ++V 
Sbjct: 1142 HNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVV 1201

Query: 586  VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
            V SA++D Y+KCG I  A   F+      +V  +N++I  YA HG   +A+++F +M L 
Sbjct: 1202 VGSALVDMYSKCGRIDYASRFFEL-MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLD 1260

Query: 646  NLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
               P   A  + V+SACSH G V++G   FKSM   Y + P  + + C+VD+L R G L+
Sbjct: 1261 GQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLD 1320

Query: 705  DAKHVIEIMPFQPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLLS 760
            +    I  MP +P+  ++R++L   CR +G N ELG  A+E LL L P+N   +VLL+
Sbjct: 1321 EVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 1378



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 182/694 (26%), Positives = 327/694 (47%), Gaps = 32/694 (4%)

Query: 65   QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
            ++H   +K GF  ++FL N LI +Y + G  G   ++FDEM+ RNLV+W  ++S   QNG
Sbjct: 565  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 624

Query: 125  EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNPFV 182
            + D     + DM   GF+PN +A GS ++ C   G S  + G  IH    K R   +  V
Sbjct: 625  KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 684

Query: 183  GCSVLNFYAKLGDVAAAER-VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
               +++ Y    D A   R VF  I   +   WN++I  Y+  G    A ++ SSM  EG
Sbjct: 685  CNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEG 744

Query: 242  ITM----DKYTFINALQGCSLVADFD--IGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +      ++YTF + +       DF   +  Q+   + +S     + + +AL+  + +  
Sbjct: 745  LGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFG 804

Query: 296  GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILL 354
              D A  +FE+M  ++V+S N L  G  + K     A +FH+   L G   N  ++ +LL
Sbjct: 805  LTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVG--INSDSYVVLL 862

Query: 355  RQCGKLLDLD----LGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVS 409
                +   L+     G ++    +  G  D +  + + L+ M+ + GA+  A SVF+ + 
Sbjct: 863  SAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMV 922

Query: 410  YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG- 468
             K+  +WN L+SG   N C  D  ++F  +  +G   +  T    + +C  S    M+G 
Sbjct: 923  EKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA-SLGWIMLGE 981

Query: 469  QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH-Q 527
            QIH   +K G  +   + ++L+  Y   G      +  +     D  SW +++ AL   +
Sbjct: 982  QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSE 1041

Query: 528  GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
                +AV  F  ++  G          IL++ +++  ++ +  IH  V+K   + +  + 
Sbjct: 1042 ASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 1101

Query: 588  SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
            +A++  Y KCG++      F +   + D + +N++I  Y H+ L+ +AM++   M     
Sbjct: 1102 NALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQ 1161

Query: 648  QPSQATFVSVMSACSHKGLVDKG-----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
            +    TF +V+SAC+    +++G     C +   M+S   +  +      LVDM S+ G 
Sbjct: 1162 RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSA------LVDMYSKCGR 1215

Query: 703  LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            ++ A    E+MP + +   + S++SG   HG+ E
Sbjct: 1216 IDYASRFFELMPLR-NVYSWNSMISGYARHGHGE 1248



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 3/389 (0%)

Query: 58   KSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
            + R  G +VH H+++ G   N + + N L+ MY+K G       VF+ M E++ VSW  +
Sbjct: 873  EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 932

Query: 117  VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            +S   QN   +   + ++ M+  G MP+ F + S +  C S+G    G  IHC  LK+ +
Sbjct: 933  ISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGL 992

Query: 177  EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVS 235
            + +  V  ++L  YA+ G      +VF  +   D   WN++IG  +       +A+    
Sbjct: 993  DTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFL 1052

Query: 236  SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
             M+  G  + + TFIN L   S ++  ++  QIH L+++  +    +I NAL+  Y K  
Sbjct: 1053 EMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCG 1112

Query: 296  GMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             M+   K+F RM++ +D +SWN++  G+  N+   +   L    +  G R +  TF+ +L
Sbjct: 1113 EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVL 1172

Query: 355  RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              C  +  L+ G+++    +      +  V S+L+ M+ +CG ++ A   F+ +  +N+ 
Sbjct: 1173 SACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVY 1232

Query: 415  TWNELLSGYCFNCCDADVLKTFCNIWESG 443
            +WN ++SGY  +      LK F  +   G
Sbjct: 1233 SWNSMISGYARHGHGEKALKLFTRMMLDG 1261



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 244/523 (46%), Gaps = 21/523 (4%)

Query: 161  SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            SE    +H  ++K     N F+  +++N Y ++GD+ +A+++F  +S+ ++  W  +I G
Sbjct: 560  SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 619

Query: 221  YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEVE 278
            Y   G   EA      M+  G   + Y F +AL+ C  S  +   +G QIHGLI ++   
Sbjct: 620  YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679

Query: 279  CSISIVNALIDMYIKSSGMDY---AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
              + + N LI MY   S +D    A  VF+R+  ++ ISWN++   +S   +      LF
Sbjct: 680  SDVVVCNVLISMY--GSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLF 737

Query: 336  HKFILSGS----RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL--HCGFLDEENVTSSLI 389
                  G     +PN  TF  L+      +D  L +  Q LA     GFL +  V S+L+
Sbjct: 738  SSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALV 797

Query: 390  YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
              F R G  + A ++F+ +  +N+ + N L+ G           K F  + +  V +N  
Sbjct: 798  SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSD 856

Query: 450  TFFYVV----ETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICSSLIKSYVNFGQLDNSFE 504
            ++  ++    E     E ++   ++H  +I+TG +     I + L+  Y   G + ++  
Sbjct: 857  SYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACS 916

Query: 505  FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                    D  SW +++S L     + +A   F  +   G  P  + L + L+SCA++G 
Sbjct: 917  VFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGW 976

Query: 565  YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
                + IH   +KLG +T+V V++A++  YA+ G        F       D + +N++I 
Sbjct: 977  IMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL-MPEYDQVSWNSVIG 1035

Query: 625  AYAH-HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
            A +     VS+A++ F +M       S+ TF++++SA S   L
Sbjct: 1036 ALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 164/305 (53%), Gaps = 2/305 (0%)

Query: 47   LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            L  +LS   +L   +LG Q+H   +KLG   D+ + N L+A+Y++ G F   L+VF  M 
Sbjct: 964  LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 1023

Query: 107  ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            E + VSW  ++ A +         +K +++M   G+  +     +++    S+   E  +
Sbjct: 1024 EYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSH 1083

Query: 166  SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHC 224
             IH   LK  +  +  +G ++L+ Y K G++   E++F  +S + D   WN+MI GY H 
Sbjct: 1084 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 1143

Query: 225  GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
                +A+++V  M+ +G  +D +TF   L  C+ VA  + G ++H   IR+ +E  + + 
Sbjct: 1144 ELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVG 1203

Query: 285  NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            +AL+DMY K   +DYA + FE M  ++V SWN++  G++ + +  +   LF + +L G  
Sbjct: 1204 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 1263

Query: 345  PNHVT 349
            P+HV 
Sbjct: 1264 PDHVA 1268



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 205/441 (46%), Gaps = 33/441 (7%)

Query: 248 TFINALQG--CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + IN  QG  CS  A     R++H   I+     ++ + N LI++Y++   +  A K+F+
Sbjct: 549 SLINRYQGSCCSEEA-----RELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFD 603

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK--LLDL 363
            M+++++++W  L  G+++N  P +  + F   + +G  PNH  F   LR C +      
Sbjct: 604 EMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC 663

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSG 422
            LG+Q+  L     +  +  V + LI M+  C  +   A SVFD +  +N  +WN ++S 
Sbjct: 664 KLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISV 723

Query: 423 YCFNCCDADVLKTFCNIWESGV----EVNGCTFFYVVETCCRSEN------QQMVGQIHG 472
           Y            F ++ + G+    + N  TF  ++   C S +      +QM+ ++  
Sbjct: 724 YSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVE- 782

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
              K+GF    Y+ S+L+  +  FG  D++          ++ S   +M  LV Q     
Sbjct: 783 ---KSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEA 839

Query: 533 AVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQ----RTKSIHPFVIKLGFN-TEVYV 586
           A  +FH + +  G   D Y++  +L++ +     +    + + +H  VI+ G N  +V +
Sbjct: 840 AAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAI 897

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            + +++ YAK G I  A   F+      D + +N+LI     +    +A E F +M+   
Sbjct: 898 GNGLVNMYAKSGAIADACSVFELMV-EKDSVSWNSLISGLDQNECSEDAAESFLRMRRTG 956

Query: 647 LQPSQATFVSVMSACSHKGLV 667
             PS  T +S +S+C+  G +
Sbjct: 957 SMPSNFTLISTLSSCASLGWI 977



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 41   RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
            R D    A  LS   ++ +   G +VH   ++    +D+ + + L+ MYSKCG   +  R
Sbjct: 1162 RLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASR 1221

Query: 101  VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMG 159
             F+ M  RN+ SW  ++S   ++G  +  LK++  M  +G  P+  A +  V+  C  +G
Sbjct: 1222 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVG 1281

Query: 160  ASEFGY 165
              E G+
Sbjct: 1282 FVEEGF 1287


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 181/635 (28%), Positives = 323/635 (50%), Gaps = 6/635 (0%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+    L  +  M  N  +P+ F   S++K C S+    FG SIH   L      + ++
Sbjct: 24  HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYI 83

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++N YAK G +A A +VF  +   DV  W AMIG Y+  G   EA ++V+ M F+GI
Sbjct: 84  SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T +  L G   V +    + +H   +    +C I+++N+++++Y K   +  A  
Sbjct: 144 KPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F++M  +D++SWNT+  G++   N  +   L ++    G RP+  TF   L   G + D
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L++G  L C  +  GF  + ++ ++LI M+ +CG  E ++ V + +  K++  W  ++SG
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                     L  F  + +SG +++      VV +C +  +  +   +HG +++ G++  
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-V 541
               +SLI  Y   G LD S          D+ SW A++S         +A+ +F  +  
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +  ++ D + + ++L +C++ GA    K IH  VI+        V +A++D Y+KCG ++
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+  FD S +  DV+ +  LI  Y  HG    A+EI+ +   + ++P+   F++V+S+C
Sbjct: 501 AAQRCFD-SISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH G+V +G  +F SM   +G++P+ +   C+VD+L R   +EDA    +    +PS  V
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDV 619

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
              +L  CR +G  E+ +   E ++ L P  DA H
Sbjct: 620 LGIILDACRANGKTEVEDIICEDMIELKP-GDAGH 653



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 273/536 (50%), Gaps = 27/536 (5%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           +N+ I   +  G   + L+  SSML   +  D +TF + L+ C+ +     G  IH  ++
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            +       I ++L+++Y K   + +A KVFE M ++DV+ W  + G +S     G+  S
Sbjct: 74  VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDEENVTSSLIY 390
           L ++    G +P  VT   LL     +L++    QLQCL   A+  GF  +  V +S++ 
Sbjct: 134 LVNEMRFQGIKPGPVT---LLEMLSGVLEIT---QLQCLHDFAVIYGFDCDIAVMNSMLN 187

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           ++C+C  V  A  +FD +  +++ +WN ++SGY      +++LK    +   G+  +  T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247

Query: 451 F---FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
           F     V  T C  E  +M   +H  I+KTGF    ++ ++LI  Y+  G+ + S+    
Sbjct: 248 FGASLSVSGTMCDLEMGRM---LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D+  W  M+S L+  G   +A+ +F  ++++G       + +++ SCA +G++  
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
             S+H +V++ G+  +    +++I  YAKCG +  + + F++  N  D++ +N +I  YA
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER-MNERDLVSWNAIISGYA 423

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKG----CLLFKSMDSQYG 682
            +  + +A+ +F++MK   +Q   + T VS++ ACS  G +  G    C++ +S      
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF----- 478

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           ++P       LVDM S+ GYLE A+   + + ++   + +  L++G   HG  ++ 
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIA 533



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 207/412 (50%), Gaps = 1/412 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   V  GF  DI + N+++ +Y KC + G    +FD+M +R++VSW  ++S     G 
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               LK+   M+ +G  P++   G+ + V  +M   E G  +HC  +K   + +  +  +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  Y K G   A+ RV  +I + DV CW  MI G    G   +AL V S ML  G  + 
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
                + +  C+ +  FD+G  +HG ++R         +N+LI MY K   +D +  +FE
Sbjct: 346 SEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE 405

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLD 364
           RM ++D++SWN +  G+++N +  +   LF +    +  + +  T   LL+ C     L 
Sbjct: 406 RMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALP 465

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G  + C+ +         V ++L+ M+ +CG +E A   FD++S+K++ +W  L++GY 
Sbjct: 466 VGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYG 525

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           F+      L+ +     SG+E N   F  V+ +C  +   Q   +I  ++++
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/593 (22%), Positives = 276/593 (46%), Gaps = 5/593 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D       L    +L+    G  +H  ++  GF++D ++ ++L+ +Y+K G      
Sbjct: 42  LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+EM ER++V WT ++    + G       +  +M+  G  P    +  ++   + + 
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT 161

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             +    +H FA+    + +  V  S+LN Y K   V  A+ +F  +   D+  WN MI 
Sbjct: 162 QLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G   E L ++  M  +G+  D+ TF  +L     + D ++GR +H  I+++  + 
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  ALI MY+K    + +++V E + +KDV+ W  +  G        +   +F + +
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SGS  +    + ++  C +L   DLG  +    L  G+  +    +SLI M+ +CG ++
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETC 458
            +  +F+ ++ +++ +WN ++SGY  N      L  F  + +++  +V+  T   +++ C
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
             +    +   IH  +I++    C  + ++L+  Y   G L+ +    +     D+ SWG
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWG 518

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK- 577
            +++     G    A+ I+   + +G +P+  I   +L+SC+  G  Q+   I   +++ 
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRD 578

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            G        + V+D   +   I+ A   + ++F    + V   ++ A   +G
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 175/586 (29%), Positives = 307/586 (52%), Gaps = 2/586 (0%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E+N       L+ Y + G +  A  +F ++   D   WN MI G+   G  ++A++   
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M F G+  D +T+   ++ C  + D   G ++HG +I+S ++  I I N+LI MY K  
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A  VF  M  +D++SWN++  G+    +  ++ S F +   SG + +  +   +L 
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILG 235

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C     L  G ++ C  +      +  V +SL+ M+ +CG ++ A  +FD ++ K+I  
Sbjct: 236 ACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA 295

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           WN ++ GY  N    +       + E G +  +  T   ++  C + E   +   +HG  
Sbjct: 296 WNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFA 355

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ GF     + ++L+  Y   G+L  +          ++ SW AM+++    G N +A+
Sbjct: 356 IRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAM 415

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           T+F  L     KPD   + +IL + A + + +  + IH +V KL  ++  +V+++++  Y
Sbjct: 416 TLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMY 475

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            KCG++  AR  FD+     DVI +NT+IMAYA HG    ++E+F +M+    +P+ +TF
Sbjct: 476 GKCGNLLRAREIFDR-MTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTF 534

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           VS++ +CS  GLV++G   F SM   Y + P  + YGC++D++ R G L+ AK+ IE MP
Sbjct: 535 VSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMP 594

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             P+  ++ SLL+  R  G+ EL E A+E +L L   N   +VLLS
Sbjct: 595 LAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLS 640



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/561 (24%), Positives = 268/561 (47%), Gaps = 20/561 (3%)

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           ++ Y + GY    L +F+ M + +   W +++   + NG F   +  Y  M+  G   + 
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
           F    V+K C  +     G  +H   +K  ++ + ++G S++  YAK+G + +AE VF  
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   D+  WN+MI GY   G G+ +L+    M   GI +D+++ I  L  CSL      G
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           ++IH  ++RS +E  + +  +L+DMY K   MDYA ++F+++ DK +++WN + GG+S N
Sbjct: 247 KEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLN 306

Query: 326 KNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
               ++ +   K    G   P+ +T   LL  C +L  + LG  +   A+  GFL    +
Sbjct: 307 AQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVL 366

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+  CG ++ A  +F  ++ +N+ +WN +++ Y  N  +   +  F ++    +
Sbjct: 367 ETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTL 426

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + +  T   ++       + +   QIHG + K    S  ++ +S++  Y   G L  + E
Sbjct: 427 KPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRARE 486

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG- 563
             +     D+ SW  ++ A    G    ++ +F  + E G +P+     ++L SC+  G 
Sbjct: 487 IFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGL 546

Query: 564 ---------AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
                    + +R  +I+P +   G          ++D   + G++  A+   ++   + 
Sbjct: 547 VNEGWEYFNSMKRDYNINPGIEHYG---------CILDLIGRTGNLDHAKNFIEEMPLAP 597

Query: 615 DVIVYNTLIMAYAHHGLVSEA 635
              ++ +L+ A  + G V  A
Sbjct: 598 TARIWGSLLTASRNKGDVELA 618



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/545 (26%), Positives = 261/545 (47%), Gaps = 22/545 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VHG ++K G   DI++ N+LI MY+K G       VF EM  R+LVSW  ++S  + 
Sbjct: 145 GERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVS 204

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+    L  + +M+ +G   + F+V  ++  C   G    G  IHC  ++ R+E +  V
Sbjct: 205 VGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMV 264

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG- 241
             S+++ YAK G +  AER+F  I+   +  WNAMIGGY+     FE+   V  M   G 
Sbjct: 265 QTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGK 324

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T IN L  C+ +    +G+ +HG  IR+     + +  AL+DMY +   +  A 
Sbjct: 325 LHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAE 384

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F +M ++++ISWN +   +++N    +  +LF        +P+  T + +L    +L 
Sbjct: 385 CLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELA 444

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L    Q+              V++S+++M+ +CG +  A  +FD +++K++ +WN ++ 
Sbjct: 445 SLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIM 504

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAI-IK 476
            Y  +      ++ F  + E G E NG TF  ++ +C  +    E  +    +     I 
Sbjct: 505 AYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNIN 564

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS----WGAMMSALVHQGHNHE 532
            G    G I   + ++    G LD++  F    E + +A     WG++++A  ++G    
Sbjct: 565 PGIEHYGCILDLIGRT----GNLDHAKNF---IEEMPLAPTARIWGSLLTASRNKGDVEL 617

Query: 533 A-VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           A +   H L    +    Y+L  + N  A  G ++  + I   + K G   E  V  +V+
Sbjct: 618 AEIAAEHILSLEHDNTGCYVL--LSNMYAEAGRWEDVERIKFHMKKEGL--EKSVGCSVV 673

Query: 592 DAYAK 596
           D  +K
Sbjct: 674 DLSSK 678



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 172/382 (45%), Gaps = 11/382 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D I +   L     L++ +LG  VHG  ++ GF   + L+  L+ MY +CG      
Sbjct: 325 LHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAE 384

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +M ERNL+SW  ++++  +NGE    + ++ D+      P+   + S++     + 
Sbjct: 385 CLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELA 444

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +      IH +  K++++ N FV  S++  Y K G++  A  +F  ++  DV  WN +I 
Sbjct: 445 SLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIM 504

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
            YA  G+G  ++ + S M  +G   +  TF++ L  CS+    + G +    + R   + 
Sbjct: 505 AYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNIN 564

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNPGQTASLFHK 337
             I     ++D+  ++  +D+A    E M        W +L    S NK   + A +  +
Sbjct: 565 PGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTA-SRNKGDVELAEIAAE 623

Query: 338 FILSGSRPN---HVTFSILLRQCGKLLDLD-LGLQLQCLALH----CGFLDEENVTSSLI 389
            ILS    N   +V  S +  + G+  D++ +   ++   L     C  +D  + T   +
Sbjct: 624 HILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFV 683

Query: 390 YMFCRCGAVEMAHSVFDNVSYK 411
                   + M + V D +S K
Sbjct: 684 NQDRSDNEINMVYDVLDIISKK 705


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/664 (27%), Positives = 346/664 (52%), Gaps = 23/664 (3%)

Query: 134 VDMKTNGFMPNEFAVGSVM-KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           +D+ T    P +    S++ K C+     + G  +H   ++  +E +  V  ++++ Y+K
Sbjct: 32  LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91

Query: 193 LGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
            GD   A  +F  + +  D+  W+AM+  +A+    ++A+     ML  G   ++Y F  
Sbjct: 92  CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151

Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSG-MDYAFKVFERMAD 309
            ++ CS      +G  I+G ++++  +E  + +   LIDM++K SG +  A+KVF++M +
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +++++W  +   F++         LF    LSG  P+  T+S +L  C +L  L LG QL
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
               +  G   +  V  SL+ M+ +C   G+V+ +  VF+ +   N+ +W  +++ Y  +
Sbjct: 272 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 331

Query: 427 C-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
             CD + ++ FC +    +  N  +F  V++ C    +     Q++   +K G +S   +
Sbjct: 332 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 391

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SLI  Y   G+++++ +  +     ++ S+ A++        + EA  +F+ + + G 
Sbjct: 392 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 451

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
               +   ++L+  A+IGA  + + IH  ++K G+ +   + +A+I  Y++CG+I+ A  
Sbjct: 452 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 511

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F++  + N VI + ++I  +A HG  + A+E+F KM     +P++ T+V+V+SACSH G
Sbjct: 512 VFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 570

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           ++ +G   F SM  ++G+ P  + Y C+VD+L R+G L +A   I  MP      V+R+L
Sbjct: 571 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 630

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLL 771
           L  CR+HGN ELG  A+E +L   P + AA++LLS               RK  +E NL+
Sbjct: 631 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 690

Query: 772 DHEG 775
              G
Sbjct: 691 KEAG 694



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 288/577 (49%), Gaps = 8/577 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAA 120
           LG  VH  +++ G   D  + N LI++YSKCG       +F+ M  +R+LVSW+ +VS  
Sbjct: 62  LGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCF 121

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKN 179
             N      +  ++DM   GF PNE+   +V++ C +   +  G  I+ F +K   +E +
Sbjct: 122 ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 181

Query: 180 PFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
             VGC +++ + K  GD+ +A +VF  +   ++  W  MI  +A  G   +A+++   M 
Sbjct: 182 VCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME 241

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG-- 296
             G   D++T+ + L  C+ +    +G+Q+H  +IR  +   + +  +L+DMY K +   
Sbjct: 242 LSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 301

Query: 297 -MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILL 354
            +D + KVFE+M + +V+SW  +   + ++    + A  LF K I    RPNH +FS +L
Sbjct: 302 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 361

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           + CG L D   G Q+   A+  G      V +SLI M+ R G +E A   FD +  KN+ 
Sbjct: 362 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 421

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           ++N ++ GY  N    +    F  I ++G+ ++  TF  ++             QIHG +
Sbjct: 422 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 481

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K G+ S   IC++LI  Y   G ++ +F+  N  E  ++ SW +M++     G    A+
Sbjct: 482 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 541

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDA 593
            +FH ++E G KP+E     +L++C+ +G      K  +    + G    +   + ++D 
Sbjct: 542 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 601

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
             + G +  A    +      D +V+ TL+ A   HG
Sbjct: 602 LGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 638



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 254/517 (49%), Gaps = 27/517 (5%)

Query: 62  LGTQVHGHIVKLGFTN-DIFLQNNLIAMYSK-CGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           +G  ++G +VK G+   D+ +   LI M+ K  G  G   +VFD+M ERNLV+WTL+++ 
Sbjct: 164 VGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITR 223

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             Q G     + +++DM+ +G++P+ F   SV+  C  +G    G  +H   +++ +  +
Sbjct: 224 FAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 283

Query: 180 PFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY-GFEALNVVS 235
             VGCS+++ YAK    G V  + +VF  +   +V  W A+I  Y   G    EA+ +  
Sbjct: 284 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 343

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+   I  + ++F + L+ C  ++D   G Q++   ++  +     + N+LI MY +S 
Sbjct: 344 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 403

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            M+ A K F+ + +K+++S+N +  G+++N    +   LF++   +G   +  TF+ LL 
Sbjct: 404 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 463

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
               +  +  G Q+    L  G+   + + ++LI M+ RCG +E A  VF+ +  +N+ +
Sbjct: 464 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 523

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQI- 470
           W  +++G+  +      L+ F  + E+G + N  T+  V+  C      SE Q+    + 
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 471 --HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQ 527
             HG + +    +C      ++      G L  + EF N    + D   W  ++ A    
Sbjct: 584 KEHGIVPRMEHYAC------MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 637

Query: 528 GHN----HEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           G+     H A  I   L +  + P  YIL + L++ A
Sbjct: 638 GNTELGRHAAEMI---LEQEPDDPAAYILLSNLHASA 671



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 175/319 (54%), Gaps = 4/319 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW---GL 99
           D    +  LS    L    LG Q+H  +++LG   D+ +  +L+ MY+KC   G      
Sbjct: 248 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 307

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +VF++M E N++SWT I++A +Q+GE D   ++++  M +    PN F+  SV+K C ++
Sbjct: 308 KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 367

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  ++ +A+K+ I     VG S+++ YA+ G +  A + F  +   ++  +NA++
Sbjct: 368 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 427

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GYA      EA  + + +   GI +  +TF + L G + +     G QIHG +++   +
Sbjct: 428 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 487

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +  I NALI MY +   ++ AF+VF  M D++VISW ++  GF+++    +   +FHK 
Sbjct: 488 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 547

Query: 339 ILSGSRPNHVTFSILLRQC 357
           + +G++PN +T+  +L  C
Sbjct: 548 LETGTKPNEITYVAVLSAC 566



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 16/291 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    +  L    NL     G QV+ + VKLG  +   + N+LI+MY++ G      
Sbjct: 350 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 409

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + FD + E+NLVS+  IV    +N + +    ++ ++   G   + F   S++    S+G
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   LK   + N  +  ++++ Y++ G++ AA +VF  +   +V  W +MI 
Sbjct: 470 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 529

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR-------QIHGLI 272
           G+A  G+   AL +   ML  G   ++ T++  L  CS V     G+       + HG++
Sbjct: 530 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 589

Query: 273 IRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
            R E   C       ++D+  +S  +  A +    M    D + W TL G 
Sbjct: 590 PRMEHYAC-------MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 633



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G  H A +    + +    PD      +L SC     +Q  K +H  +++ G   +  V 
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +I  Y+KCGD + AR+ F+   N  D++ ++ ++  +A++ +  +A+  F  M     
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC-LVDMLSR-NGYLED 705
            P++  F +V+ ACS+      G +++  +  + G   +  C GC L+DM  + +G L  
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFV-VKTGYLEADVCVGCELIDMFVKGSGDLGS 201

Query: 706 AKHVIEIMP 714
           A  V + MP
Sbjct: 202 AYKVFDKMP 210


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/664 (27%), Positives = 346/664 (52%), Gaps = 23/664 (3%)

Query: 134 VDMKTNGFMPNEFAVGSVM-KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           +D+ T    P +    S++ K C+     + G  +H   ++  +E +  V  ++++ Y+K
Sbjct: 14  LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73

Query: 193 LGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
            GD   A  +F  + +  D+  W+AM+  +A+    ++A+     ML  G   ++Y F  
Sbjct: 74  CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 133

Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSG-MDYAFKVFERMAD 309
            ++ CS      +G  I+G ++++  +E  + +   LIDM++K SG +  A+KVF++M +
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 193

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +++++W  +   F++         LF    LSG  P+  T+S +L  C +L  L LG QL
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
               +  G   +  V  SL+ M+ +C   G+V+ +  VF+ +   N+ +W  +++ Y  +
Sbjct: 254 HSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQS 313

Query: 427 C-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
             CD + ++ FC +    +  N  +F  V++ C    +     Q++   +K G +S   +
Sbjct: 314 GECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCV 373

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SLI  Y   G+++++ +  +     ++ S+ A++        + EA  +F+ + + G 
Sbjct: 374 GNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 433

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
               +   ++L+  A+IGA  + + IH  ++K G+ +   + +A+I  Y++CG+I+ A  
Sbjct: 434 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQ 493

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F++  + N VI + ++I  +A HG  + A+E+F KM     +P++ T+V+V+SACSH G
Sbjct: 494 VFNEMEDRN-VISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 552

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           ++ +G   F SM  ++G+ P  + Y C+VD+L R+G L +A   I  MP      V+R+L
Sbjct: 553 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 612

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLL 771
           L  CR+HGN ELG  A+E +L   P + AA++LLS               RK  +E NL+
Sbjct: 613 LGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLI 672

Query: 772 DHEG 775
              G
Sbjct: 673 KEAG 676



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 288/577 (49%), Gaps = 8/577 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAA 120
           LG  VH  +++ G   D  + N LI++YSKCG       +F+ M  +R+LVSW+ +VS  
Sbjct: 44  LGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCF 103

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKN 179
             N      +  ++DM   GF PNE+   +V++ C +   +  G  I+ F +K   +E +
Sbjct: 104 ANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEAD 163

Query: 180 PFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
             VGC +++ + K  GD+ +A +VF  +   ++  W  MI  +A  G   +A+++   M 
Sbjct: 164 VCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDME 223

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG-- 296
             G   D++T+ + L  C+ +    +G+Q+H  +IR  +   + +  +L+DMY K +   
Sbjct: 224 LSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 283

Query: 297 -MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILL 354
            +D + KVFE+M + +V+SW  +   + ++    + A  LF K I    RPNH +FS +L
Sbjct: 284 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 343

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           + CG L D   G Q+   A+  G      V +SLI M+ R G +E A   FD +  KN+ 
Sbjct: 344 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 403

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           ++N ++ GY  N    +    F  I ++G+ ++  TF  ++             QIHG +
Sbjct: 404 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 463

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K G+ S   IC++LI  Y   G ++ +F+  N  E  ++ SW +M++     G    A+
Sbjct: 464 LKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRAL 523

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDA 593
            +FH ++E G KP+E     +L++C+ +G      K  +    + G    +   + ++D 
Sbjct: 524 EMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDL 583

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
             + G +  A    +      D +V+ TL+ A   HG
Sbjct: 584 LGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHG 620



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 254/517 (49%), Gaps = 27/517 (5%)

Query: 62  LGTQVHGHIVKLGFTN-DIFLQNNLIAMYSK-CGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           +G  ++G +VK G+   D+ +   LI M+ K  G  G   +VFD+M ERNLV+WTL+++ 
Sbjct: 146 VGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITR 205

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             Q G     + +++DM+ +G++P+ F   SV+  C  +G    G  +H   +++ +  +
Sbjct: 206 FAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALD 265

Query: 180 PFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY-GFEALNVVS 235
             VGCS+++ YAK    G V  + +VF  +   +V  W A+I  Y   G    EA+ +  
Sbjct: 266 VCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFC 325

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+   I  + ++F + L+ C  ++D   G Q++   ++  +     + N+LI MY +S 
Sbjct: 326 KMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSG 385

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            M+ A K F+ + +K+++S+N +  G+++N    +   LF++   +G   +  TF+ LL 
Sbjct: 386 RMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLS 445

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
               +  +  G Q+    L  G+   + + ++LI M+ RCG +E A  VF+ +  +N+ +
Sbjct: 446 GAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVIS 505

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQI- 470
           W  +++G+  +      L+ F  + E+G + N  T+  V+  C      SE Q+    + 
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 471 --HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQ 527
             HG + +    +C      ++      G L  + EF N    + D   W  ++ A    
Sbjct: 566 KEHGIVPRMEHYAC------MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVH 619

Query: 528 GHN----HEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           G+     H A  I   L +  + P  YIL + L++ A
Sbjct: 620 GNTELGRHAAEMI---LEQEPDDPAAYILLSNLHASA 653



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 175/319 (54%), Gaps = 4/319 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW---GL 99
           D    +  LS    L    LG Q+H  +++LG   D+ +  +L+ MY+KC   G      
Sbjct: 230 DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSR 289

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +VF++M E N++SWT I++A +Q+GE D   ++++  M +    PN F+  SV+K C ++
Sbjct: 290 KVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNL 349

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  ++ +A+K+ I     VG S+++ YA+ G +  A + F  +   ++  +NA++
Sbjct: 350 SDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIV 409

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GYA      EA  + + +   GI +  +TF + L G + +     G QIHG +++   +
Sbjct: 410 DGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYK 469

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +  I NALI MY +   ++ AF+VF  M D++VISW ++  GF+++    +   +FHK 
Sbjct: 470 SNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM 529

Query: 339 ILSGSRPNHVTFSILLRQC 357
           + +G++PN +T+  +L  C
Sbjct: 530 LETGTKPNEITYVAVLSAC 548



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 16/291 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    +  L    NL     G QV+ + VKLG  +   + N+LI+MY++ G      
Sbjct: 332 IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDAR 391

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + FD + E+NLVS+  IV    +N + +    ++ ++   G   + F   S++    S+G
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   LK   + N  +  ++++ Y++ G++ AA +VF  +   +V  W +MI 
Sbjct: 452 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 511

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR-------QIHGLI 272
           G+A  G+   AL +   ML  G   ++ T++  L  CS V     G+       + HG++
Sbjct: 512 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIV 571

Query: 273 IRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
            R E   C       ++D+  +S  +  A +    M    D + W TL G 
Sbjct: 572 PRMEHYAC-------MVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 615



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G  H A +    + +    PD      +L SC     +Q  K +H  +++ G   +  V 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +I  Y+KCGD + AR+ F+   N  D++ ++ ++  +A++ +  +A+  F  M     
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC-LVDMLSR-NGYLED 705
            P++  F +V+ ACS+      G +++  +  + G   +  C GC L+DM  + +G L  
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFV-VKTGYLEADVCVGCELIDMFVKGSGDLGS 183

Query: 706 AKHVIEIMP 714
           A  V + MP
Sbjct: 184 AYKVFDKMP 192


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 316/627 (50%), Gaps = 9/627 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   GF PN      V   C   G  E   +I           N  V  S+++ Y + GD
Sbjct: 1   MLLEGFRPNGVTFSGVASSCS--GREELD-TIQASIAASDFHSNVVVKNSLVSAYTRSGD 57

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + +A +VF SI + D+  WN+M+  Y+  G+G E L +   M  E    D  T+ + L  
Sbjct: 58  LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMDVEP---DSITYASILGA 114

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           CS +   ++G+++H  + RS  +   ++  ALI+MY K   ++ A +VF+ +   D   W
Sbjct: 115 CSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW 174

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N +  G  ++    +   LF +      R + V++  +L  C  L DL  G+++   A  
Sbjct: 175 NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASA 234

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLK 434
           CG   +  V +++  M+ +C  V++A  +FD ++ K N+ +WN +++ Y  +    + L+
Sbjct: 235 CGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALE 294

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            +  + E GV+ +  T+   +  C          +IH  I ++   +  ++ ++++  Y 
Sbjct: 295 LYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYA 354

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G+L+ +  +     R +  +W AM+ A + QG++ EA+ ++  +V  G +P E  L  
Sbjct: 355 KCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEGFQPSEITLAG 414

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
            L +C+ IGA Q  K+IH  +         +++ +++++ YAKCG +  A   F  +   
Sbjct: 415 ALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMF-SNLQR 473

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D   +NT+I+ +AHHG V E + +  +M    + P   TF  V+ ACSH GL+D+G   
Sbjct: 474 RDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSH 533

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F SM   Y ++P  D Y CLVD+LSR G+  +A+ +   MPF P P  + +LL  C++HG
Sbjct: 534 FLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPVTWTTLLGACKLHG 593

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
             + G  A+  LL L  +  +++VLLS
Sbjct: 594 ETKRGVEAARSLLELGFECSSSYVLLS 620



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 235/507 (46%), Gaps = 5/507 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +   I    F +++ ++N+L++ Y++ G      +VFD +  ++L+SW  +V A  Q+G 
Sbjct: 29  IQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGH 88

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +  L+++  M      P+     S++  C +M   E G  +H    + R + +P +  +
Sbjct: 89  GEEMLELFRKMDVE---PDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAA 145

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++N Y+K G + +A RVF  I S D   WNAMI G    G   EAL +   M  E + +D
Sbjct: 146 LINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRID 205

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K +++  L  C  + D   G +IH       ++  + +  A+ +MY K   +D A K+F+
Sbjct: 206 KVSYLTILSACCALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFD 265

Query: 306 RMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            M +K +V+SWN++   ++++    +   L+      G +P+ +T++  L  C       
Sbjct: 266 GMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSA 325

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G ++           +  + ++++ M+ +CG +E A S F+ +  KN  TW+ ++  + 
Sbjct: 326 KGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFI 385

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCG 483
               D + L  +  +   G + +  T    +  C R    Q    IH  I  T    +C 
Sbjct: 386 QQGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCL 445

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ +SL+  Y   G L  +    +  +R D  SW  ++    H G   E +++   +V+ 
Sbjct: 446 FLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQD 505

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKS 570
           G  PD      +L +C+  G   R +S
Sbjct: 506 GVDPDYVTFACVLLACSHAGLLDRGRS 532



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 237/534 (44%), Gaps = 37/534 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I  A  L     ++   LG +VH  + +  F +D  L   LI MYSKCG      
Sbjct: 101 VEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESAR 160

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVFD +   +   W  ++S  +Q+G     L ++  MK      ++ +  +++  C ++ 
Sbjct: 161 RVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALE 220

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMI 218
               G  IH  A    ++K+  V  +V N Y+K   V  A ++F  ++   +V  WN+MI
Sbjct: 221 DLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMI 280

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA  G G EAL +   M  EG+  D  T+  AL  C+       G +IH  I  S++ 
Sbjct: 281 AAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIR 340

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + +  A+++MY K   ++ A   FE+M  K+ ++W+ + G F +     +   L+ + 
Sbjct: 341 TDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRM 400

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLG------LQLQCLALHCGFLDEENVTSSLIYMF 392
           +  G +P+ +T +  L  C ++  L  G      +Q      +C FL      +SL+ M+
Sbjct: 401 VSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQ-----NSLLNMY 455

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +CG + +A+++F N+  ++  +WN ++ G+  +    +VL     + + GV+ +  TF 
Sbjct: 456 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFA 515

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFS-----SCGYICSSLIKSYVNFGQLDNSFEFSN 507
            V+  C            H  ++  G S     +  Y    ++  Y     + +   ++ 
Sbjct: 516 CVLLACS-----------HAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAR 564

Query: 508 GAERLDMA--------SWGAMMSALVHQGHNHEAVTIFHSLVEAG-EKPDEYIL 552
            AE L MA        +W  ++ A    G     V    SL+E G E    Y+L
Sbjct: 565 EAEALAMAMPFTPRPVTWTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVL 618


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 201/714 (28%), Positives = 361/714 (50%), Gaps = 18/714 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
           + G Q+HG + KL +  D  + N LI+MY KC G  G+ L  F ++  +N VSW  I+S 
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIE 177
             Q G+     +++  M+ +G  P E+  GS++    S+   +      I C   K  + 
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV---V 234
            + FVG  +++ +AK G ++ A +VF  + + +    N ++ G     +G EA  +   +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300

Query: 235 SSMLFEGITMDKYT-FINALQGCSLVADFDI--GRQIHGLIIRSE-VECSISIVNALIDM 290
           +SM+   ++ + Y   +++    SL  +  +  GR++HG +I +  V+  + I N L++M
Sbjct: 301 NSMI--DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A +VF  M DKD +SWN++  G  +N    +    +         P   T 
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
              L  C  L    LG Q+   +L  G     +V+++L+ ++   G +     +F ++  
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478

Query: 411 KNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +  +WN ++     +     + +  F N   +G ++N  TF  V+         ++  Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQG 528
           IHG  +K   +      ++LI  Y   G++D   + FS  AER D  +W +M+S  +H  
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A+ +   +++ G++ D ++  T+L++ A++   +R   +H   ++    ++V V S
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANL 647
           A++D Y+KCG +  A + F  +    +   +N++I  YA HG   EA+++F+ MKL    
Sbjct: 659 ALVDMYSKCGRLDYA-LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P   TFV V+SACSH GL+++G   F+SM   YG+ P  + + C+ D+L R G L+  +
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777

Query: 708 HVIEIMPFQPSPTVYRSLLSG-CRIHGNK-ELGEWASEKLLLLLPKNDAAHVLL 759
             IE MP +P+  ++R++L   CR +G K ELG+ A+E L  L P+N   +VLL
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 831



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 172/681 (25%), Positives = 311/681 (45%), Gaps = 13/681 (1%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  + K     D++L NNLI  Y + G      +VFDEM  RN VSW  IVS   +NGE 
Sbjct: 24  HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFVGC 184
              L    DM   G   N++A  SV++ C  +G+    FG  IH    K+    +  V  
Sbjct: 84  KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143

Query: 185 SVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++ Y K +G V  A   F  I   +   WN++I  Y+  G    A  + SSM ++G  
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203

Query: 244 MDKYTFINAL-QGCSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             +YTF + +   CSL   D  +  QI   I +S +   + + + L+  + KS  + YA 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF--ILSGSRPNHVTF--SILLRQC 357
           KVF +M  ++ ++ N L  G    K   +   LF     ++  S  ++V    S      
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323

Query: 358 GKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            + + L  G ++    +  G +D    + + L+ M+ +CG++  A  VF  ++ K+  +W
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++G   N C  + ++ + ++    +     T    + +C   +  ++  QIHG  +K
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN-HEAVT 535
            G      + ++L+  Y   G L+   +  +     D  SW +++ AL     +  EAV 
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F +   AG+K +     ++L++ +++   +  K IH   +K     E    +A+I  Y 
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG++ G    F +     D + +N++I  Y H+ L+++A+++   M     +     + 
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           +V+SA +    +++G +   +   +  ++        LVDM S+ G L+ A      MP 
Sbjct: 624 TVLSAFASVATLERG-MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682

Query: 716 QPSPTVYRSLLSGCRIHGNKE 736
           + S + + S++SG   HG  E
Sbjct: 683 RNSYS-WNSMISGYARHGQGE 702



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 182/390 (46%), Gaps = 9/390 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  SLS   +LK   LG Q+HG  +KLG   ++ + N L+ +Y++ GY     ++F  M 
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477

Query: 107 ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           E + VSW  I+ A A         +  +++ +  G   N     SV+    S+   E G 
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHC 224
            IH  ALK  I        +++  Y K G++   E++F  ++   D   WN+MI GY H 
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +AL++V  ML  G  +D + +   L   + VA  + G ++H   +R+ +E  + + 
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-S 343
           +AL+DMY K   +DYA + F  M  ++  SWN++  G++ +    +   LF    L G +
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            P+HVTF  +L  C     L+ G +  + ++   G        S +  +  R G ++   
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777

Query: 403 SVFDNVSYK-NITTWNELLSGYCFNCCDAD 431
              + +  K N+  W  +L      CC A+
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGA----CCRAN 803



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 207/464 (44%), Gaps = 20/464 (4%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R  H  + ++ ++  + + N LI+ Y+++     A KVF+ M  ++ +SW  +  G+S 
Sbjct: 20  ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEE 382
           N    +        +  G   N   F  +LR C ++  + +  G Q+  L     +  + 
Sbjct: 80  NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139

Query: 383 NVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            V++ LI M+ +C G+V  A   F ++  KN  +WN ++S Y          + F ++  
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 442 SGVEVNGCTFFYVVETCCR--SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            G      TF  +V T C     + +++ QI   I K+G  +  ++ S L+ ++   G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF---HSLVEAGEKPDEYILGTIL 556
             + +  N  E  +  +   +M  LV Q    EA  +F   +S+++    P+ Y++  +L
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV--SPESYVI--LL 315

Query: 557 N-----SCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           +     S A     ++ + +H  VI  G  +  V + + +++ YAKCG I  AR  F   
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-YF 374

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
               D + +N++I     +G   EA+E +  M+  ++ P   T +S +S+C+       G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
             +      + G+  +      L+ + +  GYL + + +   MP
Sbjct: 435 QQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS   ++ +   G +VH   V+    +D+ + + L+ MYSKCG   + LR
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA--VGSVMKVCVSM 158
            F+ M  RN  SW  ++S   ++G+ +  LK++  MK +G  P +    VG V+  C   
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG-VLSACSHA 734

Query: 159 GASEFGY 165
           G  E G+
Sbjct: 735 GLLEEGF 741


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 188/701 (26%), Positives = 341/701 (48%), Gaps = 35/701 (4%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 66  GQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 125

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H +  K  +    
Sbjct: 126 CRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 185

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +   WNA++ GY   G   EA+ ++S M  E
Sbjct: 186 FVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKE 245

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H   I + +     +  ++++ Y     ++YA
Sbjct: 246 GIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYA 305

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M +K  ++WN L  G+ +     +   +         + + VT S L+      
Sbjct: 306 EMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATST 365

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +  G   +  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 366 QNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLL 425

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S Y  +    + L+ F  +    V  N  T+  ++ +  R+      GQ++ A       
Sbjct: 426 SAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN------GQVNEA------- 472

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 473 ------------KEMFLQMQSSGIFPN------LISWTTMMNGLVQNGCSEEAILFLRKM 514

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+G +P+ + +   L++CA + +    +SIH ++I+   ++   ++ ++++D YAKCGD
Sbjct: 515 QESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGD 574

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++   ++P   T  S++S
Sbjct: 575 INKAERVFGSKLCS-ELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 633

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC++   V++   +F  M S++GM+P  + YG +VD+L+  G  + A  ++E MP++P  
Sbjct: 634 ACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDA 693

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL   C      EL E+ S+ LL   P N   +V++S
Sbjct: 694 RMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMIS 734



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/641 (23%), Positives = 275/641 (42%), Gaps = 59/641 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG++ K G  + +F+ ++L  MY KCG      +VFD + +RN V+W  ++   +Q
Sbjct: 169 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 228

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  +++  +M+  G  P    V + +    +MG  E G   H   +   +  +  +
Sbjct: 229 NGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNIL 288

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+LNFY  +G +  AE +F  +       WN +I GY   G   EA+++   M  E +
Sbjct: 289 GTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENL 348

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T    +   +   +  +G++I    IR  +E  I + +  +DMY K   +  A K
Sbjct: 349 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 408

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+    KD+I WNTL   ++++   G+   LF++  L    PN +T+++          
Sbjct: 409 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNL---------- 458

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS----YKNITTWNE 418
                                    +I    R G V  A  +F  +     + N+ +W  
Sbjct: 459 -------------------------IILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTT 493

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT- 477
           +++G   N C  + +     + ESG+  N  T    +  C    +      IHG II+  
Sbjct: 494 MMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQ 553

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-------DMASWGAMMSALVHQGHN 530
            +S   +I +SL+  Y   G +       N AER+       ++  + AM+SA    G  
Sbjct: 554 QYSFSAWIETSLVDMYAKCGDI-------NKAERVFGSKLCSELPLYNAMISAYALYGKV 606

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCA-AIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
            EA+T++ SL + G KPD   + ++L++C       Q  +     V K G    +     
Sbjct: 607 REAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGL 666

Query: 590 VIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++D  A  G+  K  R+  +  +  +  +V +        H   +E +E   K  L +  
Sbjct: 667 MVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHK--TELVEYLSKHLLESEP 724

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +   +V + +A + +G  D+   + + M  + G++  P C
Sbjct: 725 DNSGNYVMISNAYAVEGSWDEVAKMREMMKVK-GLKKKPGC 764



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/521 (25%), Positives = 233/521 (44%), Gaps = 37/521 (7%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-------RSEVECSI 281
           EAL++V+ M +  I +    +   LQGC    D   G+QIH  I+       R+E     
Sbjct: 30  EALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEY---- 85

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFH 336
            I   L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F 
Sbjct: 86  -IETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG-----FV 139

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + + +G  P++     + + CG L     G  +       G      V SSL  M+ +CG
Sbjct: 140 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 199

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++ A  VFD +  +N   WN L+ GY  N  + + ++    + + G+E    T      
Sbjct: 200 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTV----- 254

Query: 457 TCCRSENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           + C S +  M G     Q H   I  G      + +S++  Y   G ++ +    +G   
Sbjct: 255 STCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIE 314

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
               +W  ++S  V QG   EA+ +   +     K D   L T++++  +    +  K I
Sbjct: 315 KXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI 374

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + I+ G  +++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL
Sbjct: 375 QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQ-KDLILWNTLLSAYADSGL 433

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   + 
Sbjct: 434 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GIFPNLISWT 492

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
            +++ L +NG  E+A   +  M     +P+       LS C
Sbjct: 493 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSAC 533



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 140/627 (22%), Positives = 261/627 (41%), Gaps = 51/627 (8%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR- 175
           VS+  +NGE    L +  +M            G +++ CV       G  IH   LK   
Sbjct: 19  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 78

Query: 176 -IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
              +N ++   ++ FYAK   +  A+ +F  +   +V  W A+IG     G G  AL   
Sbjct: 79  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 138

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  GI  D +   N  + C  +     GR +HG + ++ +   + + ++L DMY K 
Sbjct: 139 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 198

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ + D++ ++WN L  G+ +N    +   L  +    G  P  VT S  L
Sbjct: 199 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCL 258

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  ++ G Q     +  G   +  + +S++  +C  G +E A  +FD +  K   
Sbjct: 259 SASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXV 318

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L+SGY       + +     +    ++ +  T   ++     ++N ++  +I    
Sbjct: 319 TWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYC 378

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ G  S   + S+ +  Y   G + N+ +  +   + D+  W  ++SA    G + EA+
Sbjct: 379 IRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEAL 438

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F+ +                          + +S+ P VI             +I + 
Sbjct: 439 RLFYEM--------------------------QLESVPPNVITWNL---------IILSL 463

Query: 595 AKCGDIKGARMAFDQSFNSN---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            + G +  A+  F Q  +S    ++I + T++     +G   EA+    KM+ + L+P+ 
Sbjct: 464 LRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNA 523

Query: 652 ATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            T    +SAC+     H G    G ++    + QY      +    LVDM ++ G +  A
Sbjct: 524 FTITVALSACANLASLHFGRSIHGYII---RNQQYSFSAWIET--SLVDMYAKCGDINKA 578

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + V         P +Y +++S   ++G
Sbjct: 579 ERVFGSKLCSELP-LYNAMISAYALYG 604



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 104/527 (19%), Positives = 201/527 (38%), Gaps = 85/527 (16%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +++  Y   G   +   +FD 
Sbjct: 252 VTVSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDG 311

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+  V+W L++S  +Q G  +  + M   M+      +   + ++M    S    + G
Sbjct: 312 MIEKXXVTWNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLG 371

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             I C+ ++  +E +  +  + ++ YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 372 KEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADS 431

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 432 GLSGEALRLFYEMQLESVPPNVITW----------------------------------- 456

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I   +++  ++ A ++F +M       ++ISW T+  G  +N    +      K   
Sbjct: 457 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQE 516

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN------VTSSLIYMFCR 394
           SG RPN  T ++ L  C  L  L  G      ++H   +  +       + +SL+ M+ +
Sbjct: 517 SGLRPNAFTITVALSACANLASLHFG-----RSIHGYIIRNQQYSFSAWIETSLVDMYAK 571

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG +  A  VF +     +  +N ++S Y       + +  + ++ + GV+ +  T   +
Sbjct: 572 CGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSL 631

Query: 455 VETCCRSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           +  C    +  Q +      + K G   C                               
Sbjct: 632 LSACNYGRDVNQAIEVFSDMVSKHGMKPC------------------------------- 660

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           +  +G M+  L   G   +A+ +     E   KPD  ++ ++  SC+
Sbjct: 661 LEHYGLMVDLLASAGETDKALRLME---EMPYKPDARMVQSLFESCS 704



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 147/352 (41%), Gaps = 76/352 (21%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q      L+ D + L+  +S + + ++  LG ++  + ++ G  +DI L +  + MY+KC
Sbjct: 341 QLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKC 400

Query: 93  GYF-------------------------------GWGLRVFDEM----AERNLVSWTLIV 117
           G                                 G  LR+F EM       N+++W LI+
Sbjct: 401 GSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLII 460

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFM----------------------------------- 142
            + ++NG+ +   +M++ M+++G                                     
Sbjct: 461 LSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLR 520

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAA 199
           PN F +   +  C ++ +  FG SIH +   IR ++  F   +  S+++ YAK GD+  A
Sbjct: 521 PNAFTITVALSACANLASLHFGRSIHGYI--IRNQQYSFSAWIETSLVDMYAKCGDINKA 578

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ERVF S    ++  +NAMI  YA  G   EA+ +  S+   G+  D  T  + L  C+  
Sbjct: 579 ERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYG 638

Query: 260 ADFDIGRQIHG-LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            D +   ++   ++ +  ++  +     ++D+   +   D A ++ E M  K
Sbjct: 639 RDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 690


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  305 bits (782), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 192/636 (30%), Positives = 328/636 (51%), Gaps = 12/636 (1%)

Query: 166 SIHCFALKIR-IEKNPFVGCSVLNF-YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           SIH F +K + IEK+  V  + L   Y+K  D  +A +VF  I    V  W  ++ G   
Sbjct: 82  SIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATE 141

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  + ++    +L   I  D+Y    A+Q C  V    +G  +H  +I         +
Sbjct: 142 NGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFV 201

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             +L+ MY K   +  + KVF  + +++ +SWN +  GF  N    +  + F + +    
Sbjct: 202 NTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEI 261

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RPN   F  + +  G+L D++ G  +  +A   G     +V ++LI MF +CG V  + S
Sbjct: 262 RPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWS 321

Query: 404 VF-DNVSYKNIT-TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           VF  N S   +   WN ++SG+  +    + +  F  + ++ ++ +  T+   + +    
Sbjct: 322 VFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADM 381

Query: 462 ENQQMVGQIHGAIIKTGFSSCGY-ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
            + + V Q+HG I K+G  S G  +C++L+ +Y   G+LD   +  +  E  +  SW  +
Sbjct: 382 RSLEYVKQLHGMIWKSG--SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTL 439

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++A        +A+++F  + E G +P++     +L SCA++ + +  + +H    K GF
Sbjct: 440 VTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGF 499

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             +  V S +ID YAKCG ++ A   F +S    DVI +  +I  YA HG+  +A+E+F 
Sbjct: 500 ARDKCVESVLIDMYAKCGSVRDAIKVF-ESLKDPDVISWTAMISGYAQHGMAKDALELFR 558

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM+L    P+ ATF+ ++ ACSH GLVD+G   F  M+ +YG+ P  + Y C+VD+L R 
Sbjct: 559 KMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRV 618

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L +A   I  MP +P   V+ +LL  CR+HGN +L + A++K+L   P + AA VLLS
Sbjct: 619 GRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLS 678

Query: 761 KRKRQREGNLLDHEGVCNVNDGIKTVDLKLELKLEF 796
              R+  GN+   EG  NV + +K+  ++ E  + +
Sbjct: 679 NTYRE-AGNI---EGGLNVRNMMKSQAMRKETGMSW 710



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/567 (27%), Positives = 260/567 (45%), Gaps = 45/567 (7%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+ ++     + S V+G  VH  ++  GF++  F+  +L+ MY+K G  G   +VF
Sbjct: 163 DEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVF 222

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + +  RN VSW  ++S  + NG +      ++ M      PN     SV K    +G  E
Sbjct: 223 NSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVE 282

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-----WNAM 217
            G  I+  A +I ++ N  VG ++++ +AK G V  +  VF S  S   GC     WNAM
Sbjct: 283 KGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFS---GCGVNLPWNAM 339

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G+   G+G EA+ +   M    I  D YT+ + L   + +   +  +Q+HG+I +S  
Sbjct: 340 ISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG- 398

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +S+ NAL+D Y K   +D   K+F+   + + ISW TL   +S++       S+F +
Sbjct: 399 SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQ 458

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +PN VTFS +L  C  L  L+ G Q+  L    GF  ++ V S LI M+ +CG+
Sbjct: 459 MREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGS 518

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           V  A  VF+++   ++ +W  ++SGY  +    D L+ F  +       N  TF  ++  
Sbjct: 519 VRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFA 578

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C            HG ++  G                 F  ++  +      E      +
Sbjct: 579 CS-----------HGGLVDEGLRY--------------FHLMEERYGLVPEIEH-----Y 608

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
             ++  L   G   EA   +  +++   +PDE +  T+L +C   G  Q  K     V  
Sbjct: 609 ACVVDILGRVGRLTEA---WKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAKIAAQKV-- 663

Query: 578 LGFNTEVYVASAVI-DAYAKCGDIKGA 603
           L +N + + A  ++ + Y + G+I+G 
Sbjct: 664 LSYNPDDFAALVLLSNTYREAGNIEGG 690



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/621 (24%), Positives = 278/621 (44%), Gaps = 9/621 (1%)

Query: 66  VHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           +HG ++K          + N L+  YSKC  FG   +VFDE+ ++++ SWT+++  A +N
Sbjct: 83  IHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATEN 142

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G +  G+  +V++     +P+E+A+ + ++ C+ + +   G  +H   +        FV 
Sbjct: 143 GFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVN 202

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+L  YAKLG +  + +VF S+ + +   WNAMI G+   G   EA N    ML E I 
Sbjct: 203 TSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIR 262

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            +   FI+  +    + D + GR I+ +     ++ +I +  ALIDM+ K   +  ++ V
Sbjct: 263 PNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSV 322

Query: 304 F-ERMADKDV-ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           F    +   V + WN +  GF+ + +  +   LF +   +  + +  T+   L     + 
Sbjct: 323 FVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMR 382

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+   QL  +    G +   ++ ++L+  + +CG ++    +FD     N  +W  L++
Sbjct: 383 SLEYVKQLHGMIWKSGSIG-VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVT 441

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +    D L  F  + E G + N  TF  V+ +C    + +   Q+H    KTGF+ 
Sbjct: 442 AYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFAR 501

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + S LI  Y   G + ++ +     +  D+ SW AM+S     G   +A+ +F  + 
Sbjct: 502 DKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKME 561

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                P+      +L +C+  G      +  H    + G   E+   + V+D   + G +
Sbjct: 562 LVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRL 621

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMS 659
             A     +     D  V++TL+ A   HG +  A       K+ +  P   A  V + +
Sbjct: 622 TEAWKFIMKMPIEPDEKVWSTLLGACRVHGNIQLAK--IAAQKVLSYNPDDFAALVLLSN 679

Query: 660 ACSHKGLVDKGCLLFKSMDSQ 680
                G ++ G  +   M SQ
Sbjct: 680 TYREAGNIEGGLNVRNMMKSQ 700



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 566 QRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           ++ KSIH FVIK      +   + + ++ AY+KC D   AR  FD+      V  +  L+
Sbjct: 78  KKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDE-IPQKSVFSWTVLM 136

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           +    +G   + ++ F ++   ++ P +    + + AC
Sbjct: 137 VGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQAC 174


>gi|302814700|ref|XP_002989033.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
 gi|300143134|gb|EFJ09827.1| hypothetical protein SELMODRAFT_129138 [Selaginella moellendorffii]
          Length = 806

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 192/702 (27%), Positives = 338/702 (48%), Gaps = 7/702 (0%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G      + + G   D+ L N L+ MY  C        VFD + ER  VSW +++SA 
Sbjct: 76  VAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTSVSWNVMLSAH 135

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G F M L ++  M+ +GF P      +V++ C ++G+ E G  +H    +   E +P
Sbjct: 136 ARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSNIQEQIGELDP 195

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            VG +V+N Y K G V  A RVF        V  WN+MI  +       EA     +M  
Sbjct: 196 QVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQL 255

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG   +  TF+N L GC+ +     G  ++G++  +E      I  AL++MY     +D 
Sbjct: 256 EGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPGIEIALVNMYSSCGELDA 315

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A+++ +   D   + W++     +      +T ++  +  L+G  PN       L  C  
Sbjct: 316 AYQILQGRDDVS-LPWSSFLRATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVA 374

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
              L  G  +  L L  G      V ++L  M+ +C +++ A  +FD +  ++   WN +
Sbjct: 375 PGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAI 434

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y        V++ F ++ + GV  N  +F  V+ +        +   +H   I+  +
Sbjct: 435 MSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMAIQKNY 494

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                +  +L+  Y   G+L+ + E  +   A+    A W AM+SA V    +H+ + ++
Sbjct: 495 DEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREHHQGLALY 554

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           H ++  G +PD+  L   L  C+++ + +  + IH  V++ G   +  VASA++D Y KC
Sbjct: 555 HQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKC 614

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G ++ +R  F +S    D +++N+L+   A  G   + M +F  M+   L+   A+FVS+
Sbjct: 615 GGLEASRAVFQRS-EKQDPVLWNSLLAVEARCG--GDTMRLFHWMQQDGLRSDGASFVSL 671

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           ++ACSH G+ DK    F +M   +G+ P+ + +GC+VD+L+R G LE A+ +I     + 
Sbjct: 672 LAACSHAGVEDKAWDYFAAMKWDFGVVPASEHFGCMVDLLARTGKLEAAEELIFKSRLRL 731

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
              ++ +LL+ C  +G+    E A    L+L P+N   +V L
Sbjct: 732 DSRLWITLLAACNANGDVSRVERAGMNALVLDPQNSGLYVTL 773



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 149/646 (23%), Positives = 278/646 (43%), Gaps = 12/646 (1%)

Query: 88  MYSKCGYFGWGLRVFDEM-AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
           MY  CG      R+F E  +  N+V+WT I++A  ++G F   + ++   +  G + ++ 
Sbjct: 1   MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKT 60

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           +  +V+  C   G    G        +  +E +  +G +++N Y     V  A  VF SI
Sbjct: 61  SFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSI 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
                  WN M+  +A  G    +L V   M  +G   +  TF+  L+ C+ V   + G+
Sbjct: 121 QERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGK 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF-ERMADKDVISWNTLFGGFSEN 325
            +H  I     E    + +A+++MY K   ++ A +VF E+   + V+SWN++   F  N
Sbjct: 181 LVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLN 240

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               +    F    L G  PN  TF  LL  C  L  L  G  +  +     F  E  + 
Sbjct: 241 VLLEEAFRCFRTMQLEGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPGIE 300

Query: 386 SSLIYMFCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            +L+ M+  CG ++ A+ +    D+VS      W+  L          + L     I  +
Sbjct: 301 IALVNMYSSCGELDAAYQILQGRDDVSLP----WSSFLRATARYGYSNETLAVLRRIQLN 356

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G+  N       +  C      +    IH  +++ G      + ++L   Y     LD++
Sbjct: 357 GIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHA 416

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
               +G  + D  +W A+MS     G +   + +F S+++ G + +      +L+S    
Sbjct: 417 RLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYP 476

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNT 621
                 +S+H   I+  ++ +  VA A++  YA+ G ++ AR  FD+ S       ++  
Sbjct: 477 AMLLIGESVHSMAIQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTA 536

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I A   H    + + ++ +M L   +P + + ++ +  CS    +  G  + + +  + 
Sbjct: 537 MISACVEHREHHQGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQV-VEA 595

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           G++P       LVDM  + G LE ++ V +    Q  P ++ SLL+
Sbjct: 596 GLEPDEVVASALVDMYGKCGGLEASRAVFQRSEKQ-DPVLWNSLLA 640



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 188/405 (46%), Gaps = 5/405 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L++   G  V+G + +  F ++  ++  L+ MYS CG      ++     + +L  W+ 
Sbjct: 274 DLEALAEGDAVYGMVAETEFHSEPGIEIALVNMYSSCGELDAAYQILQGRDDVSL-PWSS 332

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            + A  + G  +  L +   ++ NG  PN  A+ S +  CV+ G    G  IH   L+  
Sbjct: 333 FLRATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAG 392

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           I+ +  V  ++   Y K   +  A  +F  +   D   WNA++  Y+  G     + +  
Sbjct: 393 IQHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFR 452

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           SML EG+  ++ +F   L      A   IG  +H + I+   +    +  AL+ MY +  
Sbjct: 453 SMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMAIQKNYDEDDVVAGALVTMYARLG 512

Query: 296 GMDYAFKVFERMADKDVIS--WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            ++ A ++F+R++ K+  +  W  +     E++   Q  +L+H+ +L G RP+ V+    
Sbjct: 513 KLEKAREIFDRVSAKEPSTALWTAMISACVEHREHHQGLALYHQMLLEGYRPDKVSLLAA 572

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  L  L  G ++    +  G   +E V S+L+ M+ +CG +E + +VF     ++ 
Sbjct: 573 LGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGGLEASRAVFQRSEKQDP 632

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             WN LL+      C  D ++ F  + + G+  +G +F  ++  C
Sbjct: 633 VLWNSLLAVEAR--CGGDTMRLFHWMQQDGLRSDGASFVSLLAAC 675



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + L  +L +  +L S   G ++H  +V+ G   D  + + L+ MY KCG       
Sbjct: 563 RPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGGLEASRA 622

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF    +++ V W  +++   + G   M  +++  M+ +G   +  +  S++  C   G 
Sbjct: 623 VFQRSEKQDPVLWNSLLAVEARCGGDTM--RLFHWMQQDGLRSDGASFVSLLAACSHAGV 680

Query: 161 SEFGYSIHCFALKIR---IEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
            +  +  +  A+K     +  +   GC V +  A+ G + AAE + +
Sbjct: 681 EDKAWD-YFAAMKWDFGVVPASEHFGCMV-DLLARTGKLEAAEELIF 725


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 190/701 (27%), Positives = 343/701 (48%), Gaps = 36/701 (5%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  I+K G  +  + +++  L+  Y+KC        +F ++  RN+ SW  I+   
Sbjct: 53  GQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVK 112

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G  +  L  +V+M  NG  P+ F V +V K C ++  S FG  +H +  K  +    
Sbjct: 113 CRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 172

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+ + Y K G +  A +VF  I   +   WNA++ GY   G   EA+ ++S M  E
Sbjct: 173 FVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKE 232

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   + T    L   + +   + G+Q H + I + +E    +  ++++ Y K   ++YA
Sbjct: 233 GIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYA 292

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M +KDV++WN L  G+ +     +   +         + + VT S L+      
Sbjct: 293 EMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATST 352

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG ++QC  +  G   +  + S+ + M+ +CG++  A  VFD+   K++  WN LL
Sbjct: 353 QNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLL 412

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           S Y  +    + L+ F  +    V  N  T+  ++ +  R+      GQ++ A       
Sbjct: 413 SAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN------GQVNEA------- 459

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F Q+ +S  F N      + SW  MM+ LV  G + EA+     +
Sbjct: 460 ------------KEMFLQMQSSGIFPN------LISWTTMMNGLVQNGCSEEAILFLRKM 501

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
            E+  +P+ + +   L++CA + +    +SIH ++I+   ++    + ++++D YAKCGD
Sbjct: 502 QESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGD 561

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  A   F     S ++ +YN +I AYA +G V EA+ ++  ++   ++P   T  S++S
Sbjct: 562 INKAERVFGSKLCS-ELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLS 620

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
            C++   V++   +F  M S++GM+P  + YG +VD+L+  G  + A  ++E MP++P  
Sbjct: 621 -CNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDA 679

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +SL   C      EL E+ S+ LL   P N   +V++S
Sbjct: 680 RMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMIS 720



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/640 (24%), Positives = 275/640 (42%), Gaps = 58/640 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG++ K G  + +F+ ++L  MY KCG      +VFD + +RN V+W  ++   +Q
Sbjct: 156 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 215

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  +++  +M+  G  P    V + +    +MG  E G   H  A+   +E +  +
Sbjct: 216 NGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 275

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+LNFY K+G +  AE +F  +   DV  WN +I GY   G   EA+ +   M  E +
Sbjct: 276 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 335

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T    +   +   +  +G++I    IR  +E  I + +  +DMY K   +  A K
Sbjct: 336 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKK 395

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+    KD+I WNTL   ++++   G+   LF++  L    PN +T+++          
Sbjct: 396 VFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNL---------- 445

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS----YKNITTWNE 418
                                    +I    R G V  A  +F  +     + N+ +W  
Sbjct: 446 -------------------------IILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTT 480

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT- 477
           +++G   N C  + +     + ES +  N  T    +  C    +      IHG II+  
Sbjct: 481 MMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQ 540

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-------DMASWGAMMSALVHQGHN 530
            +S    I +SL+  Y   G +       N AER+       ++  + AM+SA    G  
Sbjct: 541 QYSFSASIETSLVDMYAKCGDI-------NKAERVFGSKLCSELPLYNAMISAYALYGKV 593

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            EA+T++ SL + G KPD   + ++L+        Q  +     V K G    +     +
Sbjct: 594 REAITLYRSLEDGGVKPDNITITSLLSCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLM 653

Query: 591 IDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +D  A  G+  K  R+  +  +  +  +V +        H   +E +E   K  L +   
Sbjct: 654 VDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHK--TELVEYLSKHLLESEPD 711

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +   +V + +A + +G  D+   + + M  + G++  P C
Sbjct: 712 NSGNYVMISNAYAVEGSWDEVAKMREMMKVK-GLKKKPGC 750



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 235/521 (45%), Gaps = 37/521 (7%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-------RSEVECSI 281
           EAL++V+ M +  I +    +   LQGC    D   G+QIH  I+       R+E     
Sbjct: 17  EALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEY---- 72

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG-----GFSENKNPGQTASLFH 336
            I   L+  Y K   ++ A  +F ++  ++V SW  + G     G  E    G     F 
Sbjct: 73  -IETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMG-----FV 126

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + + +G  P++     + + CG L     G  +       G      V SSL  M+ +CG
Sbjct: 127 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 186

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++ A  VFD +  +N   WN L+ GY  N  + + ++    + + G+E    T      
Sbjct: 187 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTV----- 241

Query: 457 TCCRSENQQMVG-----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           + C S +  M G     Q H   I  G      + +S++  Y   G ++ +    +G   
Sbjct: 242 STCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIE 301

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ +W  ++S  V QG   EA+ +   +     K D   L T++++  +    +  K I
Sbjct: 302 KDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEI 361

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + I+ G  +++ +AS  +D YAKCG I  A+  FD +    D+I++NTL+ AYA  GL
Sbjct: 362 QCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQ-KDLILWNTLLSAYADSGL 420

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F +M+L ++ P+  T+  ++ +    G V++   +F  M S  G+ P+   + 
Sbjct: 421 SGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GIFPNLISWT 479

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLLSGC 729
            +++ L +NG  E+A   +  M     +P+       LS C
Sbjct: 480 TMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSAC 520



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 142/627 (22%), Positives = 267/627 (42%), Gaps = 51/627 (8%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR- 175
           VS+  +NGE    L +  +M            G +++ CV       G  IH   LK   
Sbjct: 6   VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQILKKGD 65

Query: 176 -IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
              +N ++   ++ FYAK   +  A+ +F  +   +V  W A+IG     G G  AL   
Sbjct: 66  FYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGF 125

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  GI  D +   N  + C  +     GR +HG + ++ +   + + ++L DMY K 
Sbjct: 126 VEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKC 185

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ + D++ ++WN L  G+ +N    +   L  +    G  P  VT S  L
Sbjct: 186 GVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCL 245

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  ++ G Q   +A+  G   +  + +S++  +C+ G +E A  +FD +  K++ 
Sbjct: 246 SASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVV 305

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L+SGY       + +     +    ++ +  T   ++     ++N ++  +I    
Sbjct: 306 TWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYC 365

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+ G  S   + S+ +  Y   G + N+ +  +   + D+  W  ++SA    G + EA+
Sbjct: 366 IRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEAL 425

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F+ +                          + +S+ P VI             +I + 
Sbjct: 426 RLFYEM--------------------------QLESVPPNVITWNL---------IILSL 450

Query: 595 AKCGDIKGARMAFDQSFNSN---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            + G +  A+  F Q  +S    ++I + T++     +G   EA+    KM+ + L+P+ 
Sbjct: 451 LRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNA 510

Query: 652 ATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            T    +SAC+     H G    G ++    + QY    S +    LVDM ++ G +  A
Sbjct: 511 FTITVALSACANLASLHFGRSIHGYII---RNQQYSFSASIET--SLVDMYAKCGDINKA 565

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + V         P +Y +++S   ++G
Sbjct: 566 ERVFGSKLCSELP-LYNAMISAYALYG 591



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/521 (19%), Positives = 202/521 (38%), Gaps = 74/521 (14%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + ++  LS S N+     G Q H   +  G   D  L  +++  Y K G   +   +FD 
Sbjct: 239 VTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDG 298

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q G  +  + M   M+      +   + ++M    S    + G
Sbjct: 299 MIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLG 358

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             I C+ ++  +E +  +  + ++ YAK G +  A++VF S    D+  WN ++  YA  
Sbjct: 359 KEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADS 418

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL +   M  E +  +  T+                                   
Sbjct: 419 GLSGEALRLFYEMQLESVPPNVITW----------------------------------- 443

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD----KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           N +I   +++  ++ A ++F +M       ++ISW T+  G  +N    +      K   
Sbjct: 444 NLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQE 503

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
           S  RPN  T ++ L  C  L  L  G  +    + +  +    ++ +SL+ M+ +CG + 
Sbjct: 504 SRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDIN 563

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF +     +  +N ++S Y       + +  + ++ + GV+ +  T   ++    
Sbjct: 564 KAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSCNY 623

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             +  Q +      + K G   C                               +  +G 
Sbjct: 624 GRDVNQAIEVFSDMVSKHGMKPC-------------------------------LEHYGL 652

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           M+  L   G   +A+ +     E   KPD  ++ ++  SC+
Sbjct: 653 MVDLLASAGETDKALRLME---EMPYKPDARMVQSLFESCS 690



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 148/352 (42%), Gaps = 77/352 (21%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q      L+ D + L+  +S + + ++  LG ++  + ++ G  +DI L +  + MY+KC
Sbjct: 328 QLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKC 387

Query: 93  GYF-------------------------------GWGLRVFDEM----AERNLVSWTLIV 117
           G                                 G  LR+F EM       N+++W LI+
Sbjct: 388 GSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLII 447

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFM----------------------------------- 142
            + ++NG+ +   +M++ M+++G                                     
Sbjct: 448 LSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESRLR 507

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAA 199
           PN F +   +  C ++ +  FG SIH +   IR ++  F   +  S+++ YAK GD+  A
Sbjct: 508 PNAFTITVALSACANLASLHFGRSIHGYI--IRNQQYSFSASIETSLVDMYAKCGDINKA 565

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ERVF S    ++  +NAMI  YA  G   EA+ +  S+   G+  D  T I +L  C+  
Sbjct: 566 ERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNIT-ITSLLSCNYG 624

Query: 260 ADFDIGRQIHG-LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            D +   ++   ++ +  ++  +     ++D+   +   D A ++ E M  K
Sbjct: 625 RDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEMPYK 676


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 170/585 (29%), Positives = 304/585 (51%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           I  + F+   ++  Y+ LG +  A +VF  I        NAM+ GY       + + ++ 
Sbjct: 85  IYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLK 144

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M    +  D YT   AL+ C  + D+++G ++ GL +   +     + +++++  +K+ 
Sbjct: 145 MMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTG 204

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A   F +M +KDV+ WN + GGF +     +  +LF   + +   P+ VT   L++
Sbjct: 205 DIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQ 264

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            CG++ +L  G  +    L  G   +  V ++LI M+C+ G VE A  +F+N+  +N+ +
Sbjct: 265 SCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVS 324

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++SGY  N    + L+ F  +    V  +  T   +++ C R+ +      +HG I 
Sbjct: 325 WNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIY 384

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + G      + ++++  Y   G L  +       +  ++ SW AM+  L   GH  +A+ 
Sbjct: 385 RRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALK 444

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +       +   L +++  C  +G  +  +S+H  + +  F +EV V +A+ID YA
Sbjct: 445 LFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYA 504

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC  I  A M F       DVI+YN++I  Y  HGL  +A+ ++ +M    LQP+++TFV
Sbjct: 505 KCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFV 564

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           S++SACSH GLV++G  LF++M   +   P+   Y C+VD+LSR G L  A+ +I  MPF
Sbjct: 565 SLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPF 624

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            P+  +  +LL+GC +H + ELG   +++LL L  +N + ++ LS
Sbjct: 625 TPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLS 669



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 140/576 (24%), Positives = 266/576 (46%), Gaps = 3/576 (0%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D FL   L+A YS  G      +VFDE+ +   V    +V+  +QN  ++  +++   M 
Sbjct: 88  DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
                 + +     +K C+ +   E G  +   A+   +    F+G S+LNF  K GD+ 
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 207

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A+  F+ +   DV CWN MIGG+   G   E  N+   ML+  I     T I+ +Q C 
Sbjct: 208 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 267

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            + +   G+ +HG ++   +     ++  LIDMY KS  ++ A  +FE M  ++++SWN 
Sbjct: 268 EMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 327

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  G+ +N    +T  LF K I+     +  T   L++ C +  DLD G  L       G
Sbjct: 328 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRG 387

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 + ++++ ++ +CG++  A SVF+ +  KN+ +W  +L G   N    D LK F 
Sbjct: 388 LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFD 447

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +    V  N  T   +V  C      +    +H  + +  F+S   + ++LI  Y    
Sbjct: 448 QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCS 507

Query: 498 QLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +++++   F  G    D+  + +M+S     G  H+A+ ++H +   G +P+E    ++L
Sbjct: 508 KINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLL 567

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEV-YVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           ++C+  G  +   ++   ++K    T    + + ++D  ++ G ++ A    +Q   +  
Sbjct: 568 SACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPT 627

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPS 650
             +  TL+     H  +   +++ D+ + L +  PS
Sbjct: 628 SGILETLLNGCLLHKDIELGVKLADRLLSLESRNPS 663



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 194/401 (48%), Gaps = 1/401 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +V G  V  G     FL ++++    K G        F +M E+++V W +++   +
Sbjct: 173 MGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFM 232

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G F  G  +++DM  N   P+   + S+++ C  M    FG  +H F L   + ++  
Sbjct: 233 QEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR 292

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ Y K GDV +A  +F ++ S ++  WN MI GY   G   E L +   ++ + 
Sbjct: 293 VLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDD 352

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T ++ +Q CS  AD D G+ +HG I R  ++ ++ +  A++D+Y K   + YA 
Sbjct: 353 VGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYAS 412

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VFERM +K+VISW  +  G ++N +      LF +        N +T   L+  C  L 
Sbjct: 413 SVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLG 472

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD-NVSYKNITTWNELL 420
            L  G  +        F  E  V ++LI M+ +C  +  A  VF   ++ K++  +N ++
Sbjct: 473 LLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 532

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           SGY  +      L  +  +   G++ N  TF  ++  C  S
Sbjct: 533 SGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 573



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 178/376 (47%), Gaps = 12/376 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +++   G  +HG ++  G + D  +   LI MY K G       +F+ M  RNLVSW ++
Sbjct: 269 MRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVM 328

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S  +QNG     L+++  +  +    +   V S++++C      + G  +H F  +  +
Sbjct: 329 ISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGL 388

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N  +  ++++ YAK G +A A  VF  + + +V  W AM+ G A  G+  +AL +   
Sbjct: 389 DLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQ 448

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  E +T +  T ++ +  C+L+     GR +H  + R      + ++ ALIDMY K S 
Sbjct: 449 MQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSK 508

Query: 297 MDYAFKVFER-MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           ++ A  VF+  +  KDVI +N++  G+  +    +   ++H+    G +PN  TF  LL 
Sbjct: 509 INSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLS 568

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSS------LIYMFCRCGAVEMAHSVFDNVS 409
            C        GL  + +AL    + + N T +      ++ +  R G +  A  + + + 
Sbjct: 569 ACSH-----SGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMP 623

Query: 410 YKNITTWNELLSGYCF 425
           +   +   E L   C 
Sbjct: 624 FTPTSGILETLLNGCL 639


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 184/640 (28%), Positives = 316/640 (49%), Gaps = 28/640 (4%)

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           +E  YS+H       +E N     S L    K G +  A  +F  ++  D   W  +I G
Sbjct: 48  AENAYSVHNM-----LELN-----SELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAG 97

Query: 221 YAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           Y +    +EAL + S+M +  G   D++    AL+ C+L  +   G  +HG  ++S +  
Sbjct: 98  YVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIH 157

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           S+ + +ALIDMY+K   ++   +VFE+M  ++V+SW  +  G        +    F +  
Sbjct: 158 SVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMW 217

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            S    +  TF+I L+       L  G  +    +  GF +   V ++L  M+ +CG  +
Sbjct: 218 RSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPD 277

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               +F+ +   ++ +W  L+S Y     +   ++ F  + +S V  N  TF  V+ +C 
Sbjct: 278 YVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCA 337

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                +   QIHG +++ G  +   + +S+I  Y   G L ++    +G  R D+ SW  
Sbjct: 338 NLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWST 397

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++S     G+  EA      +   G KP+E+ L ++L+ C ++   ++ K +H  ++ +G
Sbjct: 398 IISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIG 457

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
            + E  V SA+I  Y+KCG ++ A   F+     ND+I +  +I  YA HG   EA+ +F
Sbjct: 458 IDHEAMVHSAIISMYSKCGSVQEASKIFN-GMKINDIISWTAMINGYAEHGYSQEAINLF 516

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           +K+    L+P    F+ V++AC+H G+VD G   F  M + Y + PS + YGCL+D+L R
Sbjct: 517 EKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCR 576

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G L +A+H+I  MPF     V+ +LL  CR+HG+ + G W +E+LL L P +   H+ L
Sbjct: 577 AGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITL 636

Query: 760 SK----RKRQREG----NLLDHEGV--------CNVNDGI 783
           +     + R +E      L+  +GV         NVND +
Sbjct: 637 ANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQL 676



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/596 (25%), Positives = 272/596 (45%), Gaps = 31/596 (5%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMG 159
           +FD+M  R+ +SWT +++  +   +    L ++ +M  + G   ++F +   +K C ++G
Sbjct: 79  MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKAC-ALG 137

Query: 160 ASE-FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +  FG  +H F++K  +  + FV  ++++ Y K+G +    RVF  + + +V  W A+I
Sbjct: 138 VNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAII 197

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G  H GY  E L   S M    +  D +TF  AL+  +  +    G+ IH   I+   +
Sbjct: 198 AGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFD 257

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            S  ++N L  MY K    DY  ++FE+M   DV+SW TL   + +          F + 
Sbjct: 258 ESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRM 317

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S   PN  TF+ ++  C  L     G Q+    L  G ++  +V +S+I ++ +CG +
Sbjct: 318 RKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLL 377

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  VF  ++ K+I +W+ ++S Y       +       +   G + N      V+  C
Sbjct: 378 KSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVC 437

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                 +   Q+H  ++  G      + S++I  Y   G +  + +  NG +  D+ SW 
Sbjct: 438 GSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWT 497

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AM++     G++ EA+ +F  +   G KPD  +   +L +C            H  ++ L
Sbjct: 498 AMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN-----------HAGMVDL 546

Query: 579 GFN-----TEVYVASA-------VIDAYAKCGDIKGAR-MAFDQSFNSNDVIVYNTLIMA 625
           GF      T VY  S        +ID   + G +  A  +     F+++DV V++TL+ A
Sbjct: 547 GFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDV-VWSTLLRA 605

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
              HG V      +   +L  L P+ A T +++ +  + KG   +   + K M S+
Sbjct: 606 CRVHGDVDRGR--WTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSK 659



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 228/522 (43%), Gaps = 37/522 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG  VK G  + +F+ + LI MY K G    G RVF++M  RN+VSWT I++  + 
Sbjct: 143 GELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVH 202

Query: 123 NGEFDMGLKMYVDMKTN--GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            G    GL  + +M  +  G+  + FA+   +K          G +IH   +K   +++ 
Sbjct: 203 AGYNMEGLLYFSEMWRSKVGYDSHTFAIA--LKASADSSLLHHGKAIHTQTIKQGFDESS 260

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  ++   Y K G      R+F  +   DV  W  +I  Y   G    A+     M   
Sbjct: 261 FVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKS 320

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            ++ +KYTF   +  C+ +A    G QIHG ++R  +  ++S+ N++I +Y K   +  A
Sbjct: 321 YVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSA 380

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF  +  KD+ISW+T+   +S+     +           G +PN    S +L  CG +
Sbjct: 381 SLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSM 440

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G Q+    L  G   E  V S++I M+ +CG+V+ A  +F+ +   +I +W  ++
Sbjct: 441 ALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMI 500

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY  +    + +  F  I   G++ +   F  V+  C            H  ++  GF 
Sbjct: 501 NGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN-----------HAGMVDLGF- 548

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                          F  + N +  S   E      +G ++  L   G   EA  I  S+
Sbjct: 549 -------------YYFMLMTNVYRISPSKEH-----YGCLIDLLCRAGRLSEAEHIIRSM 590

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                  D+ +  T+L +C   G   R +     +++L  N+
Sbjct: 591 ---PFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNS 629



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 2/284 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S++  +    A  +S   NL +   G Q+HGH+++LG  N + + N++I +YSKCG    
Sbjct: 320 SYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKS 379

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF  +  ++++SW+ I+S   Q G           M+  G  PNEFA+ SV+ VC S
Sbjct: 380 ASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGS 439

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           M   E G  +H   L I I+    V  ++++ Y+K G V  A ++F  +  +D+  W AM
Sbjct: 440 MALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAM 499

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-E 276
           I GYA  GY  EA+N+   +   G+  D   FI  L  C+     D+G     L+     
Sbjct: 500 INGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYR 559

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
           +  S      LID+  ++  +  A  +   M    D + W+TL 
Sbjct: 560 ISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLL 603


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 188/701 (26%), Positives = 352/701 (50%), Gaps = 8/701 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  ++  IV  G   D+++  +LI M+ K G       VFD+M  ++ V W  ++S   Q
Sbjct: 118 GVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQ 177

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +      L+M+  M+  GF  ++ ++ ++      +G      SIH + ++  I     V
Sbjct: 178 SLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSI--CGVV 235

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ Y K GDV +A+RVF  +   D   W  M+ GY   G  FE L ++  M    +
Sbjct: 236 SNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNV 295

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            M+K   +NAL   + + D + G++I+   ++  +   I +   ++ MY K   +  A +
Sbjct: 296 KMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARE 355

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  +  +D+++W+       E   P +  S+F      G +P+    SIL+  C ++ +
Sbjct: 356 LFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISN 415

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           + LG  + C A+      + ++ ++L+ M+ R      A ++F+ +  K+I  WN L++G
Sbjct: 416 IGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLING 475

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +         L+ F  +  SG+  +  T   +   C   ++  +   +HG I K+GF S 
Sbjct: 476 FTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESD 535

Query: 483 GYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            ++  +L+  Y   G L   +  F  +   +  D  SW  M++  +H G+++EA++ F  
Sbjct: 536 IHVKVALMDMYAKCGSLCSVERLFLLTKHVK--DEVSWNVMIAGYLHNGYSNEAISTFRR 593

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +     +P+     TIL + + +   +   + H  +I++GF +   + +++ID YAKCG 
Sbjct: 594 MKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQ 653

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++ +   F +  N  D I +N ++ AYA HG    A+ +F  M+ +N++    +++SV+S
Sbjct: 654 LRYSEKCFHEMENK-DTISWNAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLS 712

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H GL+ +G  +F SM  ++ ++PS + Y C+VD+L   G  ++   ++  M  +P  
Sbjct: 713 ACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDA 772

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ +LL+ C+IH N  LGE A   LL L P+N   HV+LS
Sbjct: 773 RVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLS 813



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 162/659 (24%), Positives = 310/659 (47%), Gaps = 7/659 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRV---FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           N+ + + + C Y    L++   F ++   +L+ +   + A  +   F   + +Y  +   
Sbjct: 34  NHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKI 93

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P++F    V+K C S      G +I+   +   +E + ++G S+++ + K+G +  A
Sbjct: 94  GLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNA 153

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             VF  +   D  CWNAMI G +      EAL +   M  EG  +DK + +N     S +
Sbjct: 154 RNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRL 213

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            D    + IHG ++R  + C + + N+LIDMY K   +  A +VF+RM  +D +SW T+ 
Sbjct: 214 GDVGCCKSIHGYVVRRSI-CGV-VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMM 271

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G+ +N    +   L HK      + N V     L    ++ DL+ G ++   AL  G +
Sbjct: 272 AGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLM 331

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V + ++ M+ +CG ++ A  +F ++  +++  W+  LS         +VL  F  +
Sbjct: 332 SDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVM 391

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              G++ +      +V  C    N  +   +H   IK    S   + ++L+  Y+ F   
Sbjct: 392 QYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELF 451

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             +    N  +  D+  W  +++     G  H A+ +F+ L  +G  PD   +  + ++C
Sbjct: 452 TYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC 511

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A +        +H  + K GF ++++V  A++D YAKCG +      F  + +  D + +
Sbjct: 512 AIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSW 571

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           N +I  Y H+G  +EA+  F +MKL N++P+  TFV+++ A S+  ++ +  + F +   
Sbjct: 572 NVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSIL-REAMAFHTCII 630

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           + G          L+DM ++ G L  ++     M  + + + + ++LS   +HG  EL 
Sbjct: 631 RMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTIS-WNAMLSAYAMHGQGELA 688



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/524 (23%), Positives = 225/524 (42%), Gaps = 27/524 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +++ + +++G  +DI +   ++ MY+KCG       +F  +  R+LV+W+  +SA ++
Sbjct: 318 GKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVE 377

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     L ++  M+  G  P++  +  ++  C  +     G  +HC+A+K  +E +  +
Sbjct: 378 TGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISM 437

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y +      A  +F  +   D+  WN +I G+   G    AL + + +   GI
Sbjct: 438 VTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGI 497

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T +     C+++ D D+G  +HG I +S  E  I +  AL+DMY K   +    +
Sbjct: 498 LPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVER 557

Query: 303 VFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +F      KD +SWN +  G+  N    +  S F +  L   RPN VTF  +L     L 
Sbjct: 558 LFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLS 617

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L   +      +  GFL    + +SLI M+ +CG +  +   F  +  K+  +WN +LS
Sbjct: 618 ILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLS 677

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +      +  F  + ES V V+  ++  V+  C            H  +I+ G+  
Sbjct: 678 AYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSAC-----------RHSGLIQEGWDI 726

Query: 482 CGYICSS------------LIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSAL-VHQ 527
              +C              ++      G  D      N      D   WGA+++A  +H 
Sbjct: 727 FASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHS 786

Query: 528 GHNHEAVTIFHSLVEAGEKPDEY-ILGTILNSCAAIGAYQRTKS 570
                 V + H L      P  + +L  I   C      +RT+S
Sbjct: 787 NVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRS 830


>gi|357167647|ref|XP_003581265.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g08490-like [Brachypodium
           distachyon]
          Length = 929

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 208/796 (26%), Positives = 373/796 (46%), Gaps = 60/796 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKS-RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           LR D + LA ++  +  L+    LG  +HG +V+ G    + +   ++ MY +CG     
Sbjct: 81  LRPDRLALAAAIKSASALRDGESLGRCLHGFVVRTGHAAGVAVAKAVMDMYGRCGTLADA 140

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF---MPNEFAVGSVMKVC 155
             VFDEM+  + V W ++++ + + G FD    ++  M   G    MP    V  V+ VC
Sbjct: 141 RLVFDEMSCPDTVCWNILITGSSRAGYFDDVFDLFRSMVACGADESMPTAVTVAVVIPVC 200

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA---AERVFYSISSDDVG 212
             +     G SIH + +K  +E +   G ++++ YAK G       A R F SI   DV 
Sbjct: 201 AKLRVLRAGMSIHGYVVKTGLESDTLCGNALISLYAKCGGSGTMDDAHRAFSSIGCKDVV 260

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI-GRQIHGL 271
            WN++I G++  G   EAL +   M  +    +  T  N L  CS +      G+++HG 
Sbjct: 261 SWNSIIAGHSENGLFKEALALFGQMTSDKCLPNYSTVANILPVCSFMEHGKYYGKEVHGF 320

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           + R  +   IS+ NAL+  Y K   M  A  +F  M  +D+I+WNT+  G+  N    + 
Sbjct: 321 VFRVGLYVDISVCNALMTHYSKVYEMRAAESIFRSMNTRDIITWNTIISGYLMNGYHSRV 380

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIY 390
             LFH+ + +G  P+ V+   LL  C ++ D   G+ +         L +E ++ +SL+ 
Sbjct: 381 LDLFHRLLSTGMTPDSVSLISLLTACAQVGDAKGGMGVHGYIFRHPVLHQETSLMNSLVS 440

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD-----ADVLKTFCNIWESGVE 445
            + +C   + A   F ++  K+  +WN +LS     C        +  K F  +      
Sbjct: 441 FYSQCNRFDDALHAFADILSKDSISWNAILSA----CAKRGKHIEEFFKLFNEMCHEVTR 496

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--------------SSCGY------- 484
            +  T   VV       + +MV + HG  ++ G+              + CGY       
Sbjct: 497 WDSVTILNVVRVSNLCGSTKMVREAHGYSLRVGYIGETSVANAILDAYAKCGYPQDADVL 556

Query: 485 ----------ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
                       +++I  Y+    ++ +    N   + D  +W  M+      G   +A 
Sbjct: 557 FRNLAVRNIVTYNTMISCYLKNSSVEEAEIIFNQMSKKDQTTWNLMIQVYAQNGMCDQAF 616

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           ++F  L    + PD   +  IL +C  +   Q  +  H ++++     ++++  +++DAY
Sbjct: 617 SLFRQL----QCPDTISITNILLACIHLSLVQLVRQCHGYMLRASLE-DIHLEGSLLDAY 671

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +KCG+I  A   F Q   + D++ +  +I  YA HG+  EA+E+F +M    + P     
Sbjct: 672 SKCGNITDAYNLF-QVSPTKDLVTFTAMIGGYAMHGMAEEAVELFSEMLTLGIGPDHVVL 730

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH-VIEIM 713
            +++SACSH GLVD G  +FKS+   Y ++P+ + Y C+VD+LSR G L+DA +  +++ 
Sbjct: 731 TALLSACSHAGLVDAGIKIFKSVREIYRIEPTAEHYTCMVDLLSRGGRLQDAYNFALDMP 790

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDH 773
           P   +   + SL+  C++HG+  +G+ A+++L  +   +   +V +S      E    + 
Sbjct: 791 PHLVNANAWGSLIGACKVHGDVRIGQLAADQLFSMEFGDIGNYVTVSNIYAAGE----EW 846

Query: 774 EGVCNVNDGIKTVDLK 789
           +GV +V   +K+ D+K
Sbjct: 847 DGVEHVRKLMKSKDMK 862


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 209/725 (28%), Positives = 348/725 (48%), Gaps = 38/725 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW-TLIVSAAI 121
           G Q+H  IVK G   +  L N L+ MYSKC         F  +  R + +W TLI + + 
Sbjct: 43  GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS 102

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI----- 176
               FD+  +M ++ +     PN+  + +V+    S   S    S      + RI     
Sbjct: 103 PAAVFDLYTRMKLEERAEN-RPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDI 161

Query: 177 -----EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEA 230
                E++ FV  ++L+ Y K G V +A  VF  I   D+ CWNA I   A +      A
Sbjct: 162 RGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRA 221

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +V  M  EG+  ++ +F+  L  C   +   + R IH  +        + +  AL+ M
Sbjct: 222 LLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTM 281

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y +   +D +  VFE MA ++ +SWN +   F++  +     +++ +    G RPN +TF
Sbjct: 282 YGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITF 341

Query: 351 SILLRQCGKLLDLDLGLQLQCLALH-----CGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
              L+        DLG   +  ALH      G   +  V ++L+ M+   GA++ A + F
Sbjct: 342 VTALKAACSSSSQDLG---ESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAF 398

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D +  KNI +WN +L+ Y  N    + ++ F  +    +  N  ++  V+  CC  E+  
Sbjct: 399 DAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL-GCC--EDVS 455

Query: 466 MVGQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               IH  ++  G F+    I + +++ +   G L+ +    +     D  SW   ++AL
Sbjct: 456 EARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAAL 515

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTE 583
             +   H A+T F+++   G +PD++ L ++++ CA +G  +  +SI       +    +
Sbjct: 516 SAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERD 575

Query: 584 VYVASAVIDAYAKCGDIKG------ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           V VASAV++  AKCG          ARM  D+     D++ +NT+I AYA HG   +A++
Sbjct: 576 VVVASAVMNMVAKCGSSVDECERLFARMPDDR----KDLVAWNTMIAAYAQHGHGRKALK 631

Query: 638 IFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP-DCYGCLVD 695
           +F  M + ++++P  +TFVSV+S CSH GLV+ G   F       G++  P + Y CLVD
Sbjct: 632 LFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVD 691

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +L R GYL +A+  I  MP      V+ SLL  C  +G+ E GE A+   + L   +   
Sbjct: 692 VLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVG 751

Query: 756 HVLLS 760
           +V+LS
Sbjct: 752 YVVLS 756



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/594 (21%), Positives = 263/594 (44%), Gaps = 26/594 (4%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           + ++P E   G +++ C+       G  +H   +K  + +N  +G  ++  Y+K   +  
Sbjct: 19  DDYIPIETLAG-LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDD 77

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A   F ++ S  +  WN +I   +     F   ++ + M  E    ++   +  +     
Sbjct: 78  ANAAFSALRSRGIATWNTLIAAQSSPAAVF---DLYTRMKLEERAENRPNKLTIIAVLGA 134

Query: 259 VADFDI-------------GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +A  D               R +H  I  S++E  + +  AL+D Y K   ++ A +VF 
Sbjct: 135 IASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFS 194

Query: 306 RMADKDVISWNTLFGGFSEN-KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           R+   D+I WN      + N + P +   L  +  L G  PN  +F  +L  CG    L 
Sbjct: 195 RIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLP 254

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           L   +       GFL +  V ++L+ M+ RCG+V+ + +VF+ ++ +N  +WN +++ + 
Sbjct: 255 LARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFA 314

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM--VGQIHGAIIKTGFSSC 482
                +     +  + + G   N  TF   ++  C S +Q +     +HG I   G    
Sbjct: 315 QCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGD 374

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L+  Y + G +D +    +     ++ SW AM++A    G   EA+ +F ++  
Sbjct: 375 VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR 434

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIK 601
               P++     +L  C  +      +SIH  V+  G F  E  +A+ V+  +A+ G ++
Sbjct: 435 QSLAPNKVSYLAVLGCCEDV---SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLE 491

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A  AFD +    D + +NT + A +    +  A+  F  M+    +P + T VSV+  C
Sbjct: 492 EAVAAFDATV-VKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVC 550

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG-YLEDAKHVIEIMP 714
           +  G ++ G  + + + +   ++        +++M+++ G  +++ + +   MP
Sbjct: 551 ADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMP 604



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 189/406 (46%), Gaps = 13/406 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           L   +H  + +LGF  D+ +   L+ MY +CG     + VF+ MA RN VSW  +++A  
Sbjct: 255 LARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFA 314

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKN 179
           Q G       +Y  M+  GF PN+    + +K   S  + + G S  +H +     +E +
Sbjct: 315 QCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGD 374

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG +++  Y   G +  A   F +I + ++  WNAM+  Y   G   EA+ + ++M  
Sbjct: 375 VMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKR 434

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMD 298
           + +  +K +++  L  C  V++    R IH  ++ + +     SI N ++ M+ +S  ++
Sbjct: 435 QSLAPNKVSYLAVLGCCEDVSE---ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLE 491

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A   F+    KD +SWNT     S  ++     + F+     G RP+  T   ++  C 
Sbjct: 492 EAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCA 551

Query: 359 KLLDLDLGLQLQCLALHCGFLDEEN--VTSSLIYMFCRCG-AVEMAHSVFDNVS--YKNI 413
            L  L+LG  +Q   L      E +  V S+++ M  +CG +V+    +F  +    K++
Sbjct: 552 DLGTLELGRSIQ-QQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDL 610

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETC 458
             WN +++ Y  +      LK F  + + S V  +  TF  V+  C
Sbjct: 611 VAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGC 656


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/595 (30%), Positives = 309/595 (51%), Gaps = 1/595 (0%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           S H   +   +  + FV   ++  Y+ L  + AA  VF           NAM+ GY   G
Sbjct: 50  STHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSG 109

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              E L +   M    + +D  +   AL+ C+   D+++G +I    +   +E +  + +
Sbjct: 110 RYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGS 169

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ++I   +K   +  A +VF+ M +KDV+ WN++ GG+ +         LF +   SG +P
Sbjct: 170 SMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKP 229

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + +T + L++ CG + +L LG  +    L  G  ++  V +S + M+ + G +E A  VF
Sbjct: 230 SPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVF 289

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
             +  +N+ +WN ++SG   N    +    F  +  S    +  T   +++ C ++ +  
Sbjct: 290 YKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLA 349

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               +HG  I++ F S   + ++++  Y   G L  +    N  +  ++ +W AM+  L 
Sbjct: 350 TGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLA 408

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             GH  +A+ +F  + E G   +     ++++SCA +G+ +R +SIH  + +LGF  ++ 
Sbjct: 409 QNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIV 468

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             +A++D YAKCG I  A   F     S DV+++N++I  Y  HG   +A+ I+ KM   
Sbjct: 469 NMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEE 528

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L+P+Q TF+S++SACSH  LV++G  LF SM+  + ++P    Y CLVD+LSR G  E+
Sbjct: 529 GLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEE 588

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A+ +IE MPFQP   V  +LLSGCR H N  LG   S+KLL L   N   +++LS
Sbjct: 589 AQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLS 643



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 154/633 (24%), Positives = 293/633 (46%), Gaps = 38/633 (6%)

Query: 37  DSFLRKDPIFLAKSLSL-SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           D    + P  +   LSL  E+ K+ +     H  I+    + D F+   L+  YS     
Sbjct: 21  DGQFNQLPTIIHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSL 80

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VFD+  +   +    ++   +Q+G +   L+++  M++     +  +    +K C
Sbjct: 81  EAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKAC 140

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S    E G  I   A++  +EKN FVG S+++F  K G +  A+RVF  + + DV CWN
Sbjct: 141 ASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWN 200

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           ++IGGY   G    A  +   M   GI     T  + +Q C  + +  +G+ +HG ++  
Sbjct: 201 SIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL 260

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +   I ++ + +DMY K   ++ A  VF +M  ++++SWN +  G   N   G++  LF
Sbjct: 261 GLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLF 320

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           H+ + S    +  T   LL+ C +   L  G  L   A+   F     ++++++ ++ +C
Sbjct: 321 HRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKC 379

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G+++ A  VF+ +  +N+ TW  +L G   N    D L+ F  + E G+  N  TF  +V
Sbjct: 380 GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLV 439

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDM 514
            +C    + +    IHG + + GF+      ++L+  Y   G+++ +   FS+G+   D+
Sbjct: 440 HSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
             W +M++     GH ++AV I+H ++E G KP++    ++L++C+           H  
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACS-----------HSR 548

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +++ G         ++ ++  +  +I+                 Y  L+   +  G   E
Sbjct: 549 LVEQGI--------SLFNSMERDHNIRPIEKH------------YACLVDLLSRAGRFEE 588

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSAC-SHKGL 666
           A  + +KM     QP  A   +++S C +HK +
Sbjct: 589 AQALIEKMP---FQPGTAVLEALLSGCRTHKNI 618



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 36/205 (17%)

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           KS H  +I    +T+ +VA+ ++ AY+    ++ AR  FDQ F    ++  N ++  Y  
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLC-NAMLCGYLQ 107

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
            G   E +E+F  M+  NL+    +    + AC+     + G  +  S   + GM+ +  
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSA-VEKGMEKNRF 166

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMP---------------------------------- 714
               ++  L + G + +A+ V + MP                                  
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSG 226

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGE 739
            +PSP    SL+  C   GN +LG+
Sbjct: 227 IKPSPITMTSLIQACGGIGNLKLGK 251


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/582 (29%), Positives = 305/582 (52%), Gaps = 3/582 (0%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA--LNVVSSML 238
           ++  S++N YAK   +  A+ VF  I + DV  WN +I GY+  G    +  + +   M 
Sbjct: 41  YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            E    + +TF       S + D   GR  H + I+ +    + + ++L++MY K+    
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A KVF+ M +++ +SW T+  G++  K   +   LF          N   F+ +L    
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               ++ G Q+ C+A+  G L   +V ++L+ M+ +CG+++ A   F+  S KN  TW+ 
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +++GY  +      LK F ++  SG+  +  TF  V+  C          Q+H  ++K G
Sbjct: 281 MITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  Y+ ++L+  Y     + ++ +  +  +  D+  W +M+   V  G N +A++++ 
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYG 400

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G  P+E  + ++L +C+++ A ++ K IH   +K GF  EV + SA+   YAKCG
Sbjct: 401 RMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCG 460

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +K   + F +   + DVI +N +I   + +G   EA+E+F++M+L   +P   TFV+++
Sbjct: 461 CLKDGTLVF-RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GLV++G   F+ M  ++GM P  + Y C+VD+LSR G L++A    E       
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHG 579

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++R +L  CR + N ELG +A EKL+ L  +  +A+VLLS
Sbjct: 580 MCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLS 621



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 257/545 (47%), Gaps = 6/545 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+K   ++ +++ N+L+ +Y+KC        VF+ +  +++VSW  I++   Q
Sbjct: 25  GKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83

Query: 123 NGEFDMG--LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +G       ++++  M+     PN      V     ++  +  G   H  A+K+   ++ 
Sbjct: 84  HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S++N Y K G    A +VF ++   +   W  MI GYA      EAL +   M  E
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               +++ F + L   +L    + G+QIH + +++ +   +S+ NAL+ MY K   +D A
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA 263

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            + FE  +DK+ I+W+ +  G++++ +  +   LF    LSG RP+  TF  ++  C  L
Sbjct: 264 LQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDL 323

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
                G Q+    L  GF  +  V ++L+ M+ +C ++  A   FD +   +I  W  ++
Sbjct: 324 GAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMI 383

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY  N  + D L  +  +   G+  N  T   V++ C      +   QIH   +K GF 
Sbjct: 384 GGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443

Query: 481 SCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               I S+L   Y   G L D +  F     R D+ SW AM+S L   G   EA+ +F  
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEE 502

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCG 598
           +   G KPD      IL++C+ +G  +R       +  + G +  V   + ++D  ++ G
Sbjct: 503 MQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAG 562

Query: 599 DIKGA 603
            +K A
Sbjct: 563 KLKEA 567



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 172/331 (51%), Gaps = 11/331 (3%)

Query: 30  GNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMY 89
           G N+F   S L         +L+L E + +   G Q+H   VK G  + + + N L+ MY
Sbjct: 206 GENEFVFTSVL--------SALTLPELVNN---GKQIHCIAVKNGLLSIVSVGNALVTMY 254

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           +KCG     L+ F+  +++N ++W+ +++   Q+G+ D  LK++  M  +G  P+EF   
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
            V+  C  +GA+  G  +H + LK+  E   +V  ++++ YAK   +  A + F  +   
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  W +MIGGY   G   +AL++   M  EGI  ++ T  + L+ CS +A  + G+QIH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              ++      + I +AL  MY K   +     VF RM  +DVISWN +  G S+N    
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +   LF +  L G++P++VTF  +L  C  +
Sbjct: 495 EALELFEEMQLEGTKPDYVTFVNILSACSHM 525



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 93/168 (55%), Gaps = 12/168 (7%)

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           Q+ K++H  +IK   ++ VY+A+++++ YAKC  ++ A+  F++   + DV+ +N +I  
Sbjct: 23  QKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFER-IQNKDVVSWNCIING 80

Query: 626 YAHHGL--VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-KGCLLFKSMDSQYG 682
           Y+ HG    S  ME+F +M+  N  P+  TF  V +A S   LVD  G  L  ++  +  
Sbjct: 81  YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST--LVDAAGGRLAHAVAIK-- 136

Query: 683 MQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           M    D +    L++M  + G   +A+ V + MP + S + + +++SG
Sbjct: 137 MDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVS-WATMISG 183


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 210/729 (28%), Positives = 361/729 (49%), Gaps = 15/729 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   L   +S   +LK+   G  +H   +K G   DI L N LI MY+KCG       
Sbjct: 195 RFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDS 254

Query: 101 --VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             +F+EM  +++VSW  I+   + NG+ +  L  +  M  +    +  ++   +  C S+
Sbjct: 255 ECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSL 314

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           G   FG  IH   +K+  + N FV    S+++ Y++   V  AE VF  ++  D+  WNA
Sbjct: 315 GELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNA 374

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           M+ GYA      EA +++  M   G    D  T    L  C+ +  +  GR IHG  IR 
Sbjct: 375 MMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR 434

Query: 276 E-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             V   + + N LIDMY K + ++ A  +F   A  D++SWN +  G+S+NK   +  +L
Sbjct: 435 HMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNL 494

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F + +  G   +  T   +L  C     L+ G  +    L  GFL+   + +SL+ M+  
Sbjct: 495 FKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYIN 554

Query: 395 CGAVEMAHSVF-DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN--GCTF 451
            G +    S+  +N S  +I +WN ++ G        + L+TF  +   G   N    T 
Sbjct: 555 SGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFM-LMRQGPSFNYDSITL 613

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V+      E       +H   +K+ F S   + +SLI  Y     ++++ +       
Sbjct: 614 VNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSI 673

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ +W  M+SAL H   + EA+ +F  L     KP+E+ + ++L++C  IG     K +
Sbjct: 674 SNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSACTRIGVLIHGKQV 730

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H +  + G+    ++++A++D Y+ CG +  A   F  S  S     +N++I AY +HG 
Sbjct: 731 HGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQKSESA--WNSMIAAYGNHGN 788

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             +A+E+F +M    ++ +++TFVS++SACSH GLV++G   ++ M  +YG++P  +   
Sbjct: 789 GEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQV 848

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
            +V+ML+R+G +++A    + +    S  V+  LLS C  HG  ELG+  +EKL  + P+
Sbjct: 849 YVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQ 908

Query: 752 NDAAHVLLS 760
           N   ++ L+
Sbjct: 909 NVGYYISLA 917



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 177/683 (25%), Positives = 327/683 (47%), Gaps = 17/683 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            T VH   +K G    +    +L  +YSK G F     +F+ +  R++++W  I+SA+++
Sbjct: 116 ATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLE 175

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N  +   ++ +  M  +    +   +  V+     +     G  IHC ++K  +  +  +
Sbjct: 176 NKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISL 235

Query: 183 GCSVLNFYAKLGDVAA--AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
             +++N YAK GDV +  +E +F  +   DV  WN+++ G  + G   ++L     M F 
Sbjct: 236 CNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFS 295

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMD 298
               D  +   A+  CS + +   G  IHG  I+   +    +S+ N+LI +Y +   +D
Sbjct: 296 EERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVD 355

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQC 357
            A  VF  MA KD++SWN +  G++ N+N  +   L  +   +G  +P+ VT + +L  C
Sbjct: 356 VAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLC 415

Query: 358 GKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            +L+    G  +   A+    + D   + + LI M+ +C  VE A  +F + +  ++ +W
Sbjct: 416 AELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSW 475

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++SGY  N         F  +   G   +  T F ++ +C  + +      +H   +K
Sbjct: 476 NAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLK 535

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +GF +   + +SL++ Y+N G L + F      +   D+ASW  ++   V      EA+ 
Sbjct: 536 SGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALE 595

Query: 536 IFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            F  + +      D   L  +L++ A I    + KS+H   +K  F ++  V +++I  Y
Sbjct: 596 TFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMY 655

Query: 595 AKCGDIKGARMAFDQSFNS-NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
            +C DI  AR  F   F+S +++  +N +I A +H+    EA+E+F  ++    +P++ T
Sbjct: 656 DRCRDINSARKVFK--FHSISNLCTWNCMISALSHNKESREALELFRHLQ---FKPNEFT 710

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            VSV+SAC+  G++  G  +      +YG Q +      LVD+ S  G L++A  V    
Sbjct: 711 IVSVLSACTRIGVLIHGKQV-HGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFR-- 767

Query: 714 PFQPSPTVYRSLLSGCRIHGNKE 736
             Q S + + S+++    HGN E
Sbjct: 768 HSQKSESAWNSMIAAYGNHGNGE 790


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/595 (29%), Positives = 311/595 (52%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           SIH   +K  +    F+   ++  Y+ LG +  A  VF   S  +    NAMI G+    
Sbjct: 65  SIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQ 124

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              E   +   M    I ++ YT + AL+ C+ + D ++G +I    +R      + + +
Sbjct: 125 QHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGS 184

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ++++  +K   +  A KVF+ M +KDV+ WN++ GG+ +     ++  +F + I  G RP
Sbjct: 185 SMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRP 244

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + VT + LL+ CG+     +G+      L  G  ++  V +SL+ M+   G    A  VF
Sbjct: 245 SPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVF 304

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           D++  +++ +WN ++SGY  N    +    F  + +SG   +  T   ++  C ++ + +
Sbjct: 305 DSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLE 364

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
               +H  II+    S   + ++++  Y   G +  +        + ++ +W AM+  L 
Sbjct: 365 NGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G+  +A+ +F  + E     +   L ++++ CA +G+  + +++H   I+ G+  +  
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + SA+ID YAKCG I  A   F+  F+  DVI+ N++IM Y  HG    A+ ++ +M   
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEE 544

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L+P+Q TFVS+++ACSH GLV++G  LF SM+  + ++P    Y CLVD+ SR G LE+
Sbjct: 545 RLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEE 604

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A  +++ MPFQPS  V  +LLSGCR H N  +G   +++L+ L   N   +V+LS
Sbjct: 605 ADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLS 659



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 262/579 (45%), Gaps = 2/579 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  I+K   + + FL   LI +YS  G+ G    VFD+ +         +++  ++N +
Sbjct: 66  IHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQ 125

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
                +++  M +     N +     +K C  +   E G  I   A++     + +VG S
Sbjct: 126 HMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSS 185

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++NF  K G +A A++VF  +   DV CWN++IGGY   G  +E++ +   M+  G+   
Sbjct: 186 MVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPS 245

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  N L+ C       +G   H  ++   +   + ++ +L+DMY        A  VF+
Sbjct: 246 PVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFD 305

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  + +ISWN +  G+ +N    ++ +LF + + SGS  +  T   L+R C +  DL+ 
Sbjct: 306 SMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLEN 365

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  L    +         ++++++ M+ +CGA++ A  VF  +  KN+ TW  +L G   
Sbjct: 366 GRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQ 425

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    D LK FC + E  V  N  T   +V  C    +      +H   I+ G++    I
Sbjct: 426 NGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVI 485

Query: 486 CSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
            S+LI  Y   G++ ++ + F+N     D+    +M+      GH   A+ ++  ++E  
Sbjct: 486 TSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEER 545

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
            KP++    ++L +C+  G  +  K++ H          +    + ++D +++ G ++ A
Sbjct: 546 LKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEA 605

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                Q        V   L+     H   +  ++I D++
Sbjct: 606 DELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRL 644



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 197/401 (49%), Gaps = 1/401 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++    V+ GF   +++ ++++    K GY     +VFD M E+++V W  I+   +
Sbjct: 163 VGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYV 222

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G F   ++M+++M   G  P+   + +++K C   G  + G   H + L + +  + F
Sbjct: 223 QKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVF 282

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y+ LGD  +A  VF S+ S  +  WNAMI GY   G   E+  +   ++  G
Sbjct: 283 VLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSG 342

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T ++ ++GCS  +D + GR +H  IIR E+E  + +  A++DMY K   +  A 
Sbjct: 343 SGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQAT 402

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF RM  K+VI+W  +  G S+N        LF +        N VT   L+  C  L 
Sbjct: 403 IVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLG 462

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN-VSYKNITTWNELL 420
            L  G  +    +  G+  +  +TS+LI M+ +CG +  A  +F+N    K++   N ++
Sbjct: 463 SLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMI 522

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            GY  +      L  +  + E  ++ N  TF  ++  C  S
Sbjct: 523 MGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHS 563



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/469 (22%), Positives = 215/469 (45%), Gaps = 2/469 (0%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           + IH  II++ V     +   LI +Y     + +A  VF++ +  +    N +  GF  N
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
           +   +   LF          N  T    L+ C  LLD ++G+++   A+  GF     V 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           SS++    + G +  A  VFD +  K++  WN ++ GY       + ++ F  +   G+ 
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +  T   +++ C +S  +++    H  ++  G  +  ++ +SL+  Y N G   ++   
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +      + SW AM+S  V  G   E+  +F  LV++G   D   L +++  C+     
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +  + +H  +I+    + + +++A++D Y+KCG IK A + F +     +VI +  +++ 
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGR-MGKKNVITWTAMLVG 422

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
            + +G   +A+++F +M+   +  +  T VS++  C+H G + KG  +      ++G   
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHF-IRHGYAF 481

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
                  L+DM ++ G +  A+ +           +  S++ G  +HG+
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGH 530



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 1/319 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR  P+ +A  L        + +G   H +++ LG  ND+F+  +L+ MYS  G  G   
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA 301

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD M  R+L+SW  ++S  +QNG       ++  +  +G   +   + S+++ C    
Sbjct: 302 LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTS 361

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  +H   ++  +E +  +  ++++ Y+K G +  A  VF  +   +V  W AM+ 
Sbjct: 362 DLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLV 421

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G +  GY  +AL +   M  E +  +  T ++ +  C+ +     GR +H   IR     
Sbjct: 422 GLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481

Query: 280 SISIVNALIDMYIKSSGMDYAFKVF-ERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              I +ALIDMY K   +  A K+F      KDVI  N++  G+  + +      ++ + 
Sbjct: 482 DAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRM 541

Query: 339 ILSGSRPNHVTFSILLRQC 357
           I    +PN  TF  LL  C
Sbjct: 542 IEERLKPNQTTFVSLLTAC 560



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 108/247 (43%), Gaps = 2/247 (0%)

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           V  IH  IIK   S+  ++ + LI+ Y + G L ++    +     + A   AM++  + 
Sbjct: 63  VKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLR 122

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
              + E   +F  +     + + Y     L +C  +   +    I    ++ GF+  +YV
Sbjct: 123 NQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYV 182

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            S++++   K G +  A+  FD      DV+ +N++I  Y   GL  E++++F +M    
Sbjct: 183 GSSMVNFLVKRGYLADAQKVFD-GMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGG 241

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           L+PS  T  +++ AC   GL   G +   S     GM         LVDM S  G    A
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVG-MCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSA 300

Query: 707 KHVIEIM 713
             V + M
Sbjct: 301 ALVFDSM 307


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/668 (28%), Positives = 334/668 (50%), Gaps = 29/668 (4%)

Query: 136 MKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           M  +G  P +     S++K C+       G  +H   ++  IE +  +  S+++ Y+K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 195 DVAAAERVFYSIS---SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           D A AE VF ++      DV  W+AM+  Y + G   +A+ V    L  G+  + Y +  
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK-SSGMDYAFKVFERMAD 309
            ++ CS      +GR   G ++++   E  + +  +LIDM++K  +  + A+KVF++M++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +V++W  +     +   P +    F   +LSG   +  T S +   C +L +L LG QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
              A+  G +D+  V  SL+ M+ +C   G+V+    VFD +   ++ +W  L++GY  N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 427 CCDA-DVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           C  A + +  F  +   G VE N  TF    + C    + ++  Q+ G   K G +S   
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +S+I  +V   +++++          ++ S+   +       +  +A  +   + E  
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
                +   ++L+  A +G+ ++ + IH  V+KLG +    V +A+I  Y+KCG I  A 
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+   N N VI + ++I  +A HG     +E F++M    ++P++ T+V+++SACSH 
Sbjct: 530 RVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV +G   F SM   + ++P  + Y C+VD+L R G L DA   I  MPFQ    V+R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNL 770
            L  CR+H N ELG+ A+ K+L L P   AA++ LS               R++ +E NL
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708

Query: 771 LDHEGVCN 778
           +  EG C+
Sbjct: 709 V-KEGGCS 715



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 261/545 (47%), Gaps = 26/545 (4%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
            + +D I    S++ S  LKS +      LG  VH  +++     D  L N+LI++YSK 
Sbjct: 51  LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110

Query: 93  GYFGWGLRVFDEM---AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           G       VF+ M    +R++VSW+ +++    NG     +K++V+    G +PN++   
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170

Query: 150 SVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSIS 207
           +V++ C +      G     F +K    E +  VGCS+++ + K       A +VF  +S
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             +V  W  MI      G+  EA+     M+  G   DK+T  +    C+ + +  +G+Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290

Query: 268 IHGLIIRS----EVECSISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLFG 320
           +H   IRS    +VECS      L+DMY K S    +D   KVF+RM D  V+SW  L  
Sbjct: 291 LHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344

Query: 321 GFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           G+ +N N    A +LF + I  G   PNH TFS   + CG L D  +G Q+   A   G 
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
               +V +S+I MF +   +E A   F+++S KN+ ++N  L G C N       K    
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           I E  + V+  TF  ++       + +   QIH  ++K G S    +C++LI  Y   G 
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +D +    N  E  ++ SW +M++     G     +  F+ ++E G KP+E     IL++
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584

Query: 559 CAAIG 563
           C+ +G
Sbjct: 585 CSHVG 589



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/513 (26%), Positives = 252/513 (49%), Gaps = 20/513 (3%)

Query: 62  LGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
           +G    G ++K G F +D+ +  +LI M+ K    F    +VFD+M+E N+V+WTL+++ 
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            +Q G     ++ ++DM  +GF  ++F + SV   C  +     G  +H +A++  +  +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303

Query: 180 PFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGY-AHCGYGFEALNVVS 235
             V CS+++ YAK    G V    +VF  +    V  W A+I GY  +C    EA+N+ S
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361

Query: 236 SMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
            M+ +G +  + +TF +A + C  ++D  +G+Q+ G   +  +  + S+ N++I M++KS
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             M+ A + FE +++K+++S+NT   G   N N  Q   L  +        +  TF+ LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  +  G Q+    +  G    + V ++LI M+ +CG+++ A  VF+ +  +N+ 
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQI 470
           +W  +++G+  +     VL+TF  + E GV+ N  T+  ++  C      SE  +    +
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601

Query: 471 H-GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQ 527
           +    IK       Y C  ++      G L ++FEF N    + D+  W   + A  VH 
Sbjct: 602 YEDHKIKPKMEH--YAC--MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
                 +     L     +P  YI  + + +CA
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACA 690



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 2/268 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL    +G QV G   K G  ++  + N++I+M+ K        R F+ ++E+NLVS+  
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            +    +N  F+   K+  ++       + F   S++    ++G+   G  IH   +K+ 
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  V  ++++ Y+K G +  A RVF  + + +V  W +MI G+A  G+    L   +
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKS 294
            M+ EG+  ++ T++  L  CS V     G R  + +    +++  +     ++D+  ++
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFGG 321
             +  AF+    M    DV+ W T  G 
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGA 652



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 62/119 (52%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS   N+ S   G Q+H  +VKLG + +  + N LI+MYSKCG      RVF+ M 
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            RN++SWT +++   ++G     L+ +  M   G  PNE    +++  C  +G    G+
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 169/611 (27%), Positives = 317/611 (51%), Gaps = 2/611 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+++C    + E G  +H   +   I  +  +G  ++  Y   GD+    ++F  I +D
Sbjct: 99  SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            V  WN ++  YA  G   E++++   M   G+  + YTF   L+  + +      +++H
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G +++     + ++VN+LI  Y K  G++ A  +F+ +++ DV+SWN++  G   N   G
Sbjct: 219 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               +F + ++ G   +  T   +L  C  + +L LG  L    +   F +E   +++L+
Sbjct: 279 NGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 338

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A  VF  +    I +W  +++ Y      +D +  F  +   GV  +  
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   +V  C  S +      +H  +IK G  S   + ++LI  Y   G ++ +    +  
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 458

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  M+         +EA+ +F  + +   KPD+  +  +L +CA + A  + +
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGR 517

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH  +++ G+ ++++VA A++D YAKCG +  A++ FD      D+I +  +I  Y  H
Sbjct: 518 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDM-IPKKDLISWTVMIAGYGMH 576

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G  +EA+  F++M++A ++P +++F ++++ACSH GL+++G   F SM ++ G++P  + 
Sbjct: 577 GFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 636

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L+R G L  A   IE MP +P  T++  LLSGCRIH + +L E  +E +  L 
Sbjct: 637 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 696

Query: 750 PKNDAAHVLLS 760
           P N   +V+L+
Sbjct: 697 PDNTRYYVVLA 707



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/680 (25%), Positives = 300/680 (44%), Gaps = 31/680 (4%)

Query: 8   FLFADKP--SCHFHAT-------RKRIHRLCGN-----NQFCSDSFLRKDPIFLAKS--- 50
           F+F  +P  +C  H+T           H +  N     N+FC    LR     L KS   
Sbjct: 31  FIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSY 90

Query: 51  ----------LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
                     L L    KS   G +VH  I+  G + D  L   L+ MY  CG    G +
Sbjct: 91  ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRK 150

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD++    +  W L++S   + G F   + ++  M+  G + N +    V+K   ++G 
Sbjct: 151 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 210

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +    +H + LK+    N  V  S++  Y K G V +A  +F  +S  DV  WN+MI G
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
               G+    L +   ML  G+ +D  T ++ L  C+ + +  +GR +HG  +++     
Sbjct: 271 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE 330

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +   N L+DMY K   ++ A +VF +M D  ++SW ++   +           LF +   
Sbjct: 331 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQS 390

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RP+  T + ++  C     LD G  +    +  G      VT++LI M+ +CG+VE 
Sbjct: 391 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 450

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF  +  K+I +WN ++ GY  N    + L+ F ++ +   + +  T   V+  C  
Sbjct: 451 ARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAG 509

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   +IHG I++ G+ S  ++  +L+  Y   G L  +    +   + D+ SW  M
Sbjct: 510 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLG 579
           ++     G  +EA++ F+ +  AG +PDE     ILN+C+  G      K  +    + G
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              ++   + V+D  A+ G++  A    +      D  ++  L+     H  V  A ++ 
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 689

Query: 640 DKMKLANLQPSQATFVSVMS 659
           +   +  L+P    +  V++
Sbjct: 690 E--HIFELEPDNTRYYVVLA 707


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 205/721 (28%), Positives = 345/721 (47%), Gaps = 34/721 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW-TLIVSAAI 121
           G Q+H  IVK G   +  L N L+ MYSKC         F  +  R + +W TLI + + 
Sbjct: 43  GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSALRSRGIATWNTLIAAQSS 102

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS------MGASEFGYSIHCFALKIR 175
               FD+  +M ++ +     PN   + +V+    S        +      +H       
Sbjct: 103 PAAVFDLYTRMKLEERAEN-RPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSD 161

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEALNVV 234
           +E++ FV  ++L+ Y K G V +A  VF  I   D+ CWNA I   A +      AL +V
Sbjct: 162 LERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLV 221

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  EG+  ++ +F+  L  C   +   + R IH  +        + +  AL+ MY + 
Sbjct: 222 RRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRC 281

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D +  VFE MA ++ +SWN +   F++  +     +++ +    G RPN +TF   L
Sbjct: 282 GSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTAL 341

Query: 355 RQCGKLLDLDLGLQLQCLALH-----CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +        DLG   +  ALH      G   +  V ++L+ M+   GA++ A + FD + 
Sbjct: 342 KAACSSSSQDLG---ESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIP 398

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            KNI +WN +L+ Y  N    + ++ F  +    +  N  ++  V+  CC  E+      
Sbjct: 399 AKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVL-GCC--EDVSEARS 455

Query: 470 IHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           IH  ++  G F+    I + +++ +   G L+ +    +     D  SW   ++AL  + 
Sbjct: 456 IHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSARE 515

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVA 587
             H A+T F+++   G +PD++ L ++++ CA +G  +  +SI       +    +V V 
Sbjct: 516 DLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVE 575

Query: 588 SAVIDAYAKCGDIKG------ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           SAV++  AKCG          ARM  D+     D++ +NT+I AYA HG   +A+++F  
Sbjct: 576 SAVMNMVAKCGSSVDECERLFARMPDDR----KDLVAWNTMIAAYAQHGHGRKALKLFRI 631

Query: 642 M-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP-DCYGCLVDMLSR 699
           M + ++++P  +TFVSV+S CSH GLV+ G   F       G++  P + Y CLVD+L R
Sbjct: 632 MQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGR 691

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            GYL +A+  I  MP      V+ SLL  C  +G+ E GE A+   + L   +   +V+L
Sbjct: 692 MGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVL 751

Query: 760 S 760
           S
Sbjct: 752 S 752



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/590 (21%), Positives = 263/590 (44%), Gaps = 22/590 (3%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           + ++P E   G +++ C+       G  +H   +K  + +N  +G  ++  Y+K   +  
Sbjct: 19  DDYIPIETLAG-LLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDD 77

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A   F ++ S  +  WN +I   +     F   ++ + M  E    ++   +  +     
Sbjct: 78  ANAAFSALRSRGIATWNTLIAAQSSPAAVF---DLYTRMKLEERAENRPNRLTIIAVLGA 134

Query: 259 VADFDI---------GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           +A  D           R +H  I  S++E  + +  AL+D Y K   ++ A +VF R+  
Sbjct: 135 IASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 194

Query: 310 KDVISWNTLFGGFSEN-KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            D+I WN      + N + P +   L  +  L G  PN  +F  +L  CG    L L   
Sbjct: 195 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 254

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +       GFL +  V ++L+ M+ RCG+V+ + +VF+ ++ +N  +WN +++ +     
Sbjct: 255 IHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGH 314

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM--VGQIHGAIIKTGFSSCGYIC 486
            +     +  + + G   N  TF   ++  C S +Q +     +HG I   G      + 
Sbjct: 315 RSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVG 374

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+  Y + G +D +    +     ++ SW AM++A    G   EA+ +F ++      
Sbjct: 375 TALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLA 434

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARM 605
           P++     +L  C  +      +SIH  V+  G F  E  +A+ V+  +A+ G ++ A  
Sbjct: 435 PNKVSYLAVLGCCEDV---SEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMA 491

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
           AFD +    D + +NT + A +    +  A+  F  M+    +P + T VSV+  C+  G
Sbjct: 492 AFDATV-VKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLG 550

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG-YLEDAKHVIEIMP 714
            ++ G  + + + +   ++        +++M+++ G  +++ + +   MP
Sbjct: 551 TLELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMP 600



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/595 (22%), Positives = 251/595 (42%), Gaps = 40/595 (6%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R     VH  I       D+F+   L+  Y KCG     L VF  +   +L+ W   + A
Sbjct: 147 RAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMA 206

Query: 120 AIQNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              N E  D  L +   M   G +PN  +  +++  C    +     SIH    ++    
Sbjct: 207 CAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLG 266

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  +++  Y + G V  +  VF +++  +   WNAMI  +A CG+   A  +   M 
Sbjct: 267 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 326

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQ--IHGLIIRSEVECSISIVNALIDMYIKSSG 296
            EG   +K TF+ AL+     +  D+G    +HG I  + +E  + +  AL+ MY  +  
Sbjct: 327 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 386

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +D A   F+ +  K+++SWN +   + +N    +   LF         PN V++  +L  
Sbjct: 387 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 446

Query: 357 CGKLLDLDLGLQLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C    D+     +    +  G F  E ++ + ++ MF R G++E A + FD    K+  +
Sbjct: 447 CE---DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVS 503

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC--------RSENQQMV 467
           WN  ++           +  F  +   G   +  T   VV+ C         RS  QQ+ 
Sbjct: 504 WNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLS 563

Query: 468 GQI---HGAIIKTG----FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
             I      ++++      + CG   SS+ +    F ++ +        +R D+ +W  M
Sbjct: 564 AAIEVERDVVVESAVMNMVAKCG---SSVDECERLFARMPD--------DRKDLVAWNTM 612

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-- 577
           ++A    GH  +A+ +F  + +    +PD     ++L+ C+  G  +    IH F +   
Sbjct: 613 IAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVE--DGIHCFFLARE 670

Query: 578 -LGFNTE-VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            LG   + V   + ++D   + G ++ A     +     D +V+ +L+ A + +G
Sbjct: 671 VLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYG 725


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 180/638 (28%), Positives = 326/638 (51%), Gaps = 24/638 (3%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-----GCSVLNFYAKLGDVAAAERVFY 204
           SV+++C    + + G  +  F     I  N FV     G  +   Y   GD+  A RVF 
Sbjct: 99  SVLQLCADSKSLKDGKEVDNF-----IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +  +    WN ++   A  G    ++ +   M+  G+ MD YTF    +  S +     
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G Q+HG I++S      S+ N+L+  Y+K+  +D A KVF+ M ++DVISWN++  G+  
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N    +  S+F + ++SG   +  T   +   C     + LG  +  + +   F  E+  
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+ +CG ++ A +VF  +S +++ ++  +++GY       + +K F  + E G+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   V+  C R        ++H  I +       ++ ++L+  Y   G +  +  
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIG 563
             +     D+ SW  ++       + +EA+++F+ L+E     PDE  +  +L +CA++ 
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A+ + + IH ++++ G+ ++ +VA++++D YAKCG +  A M FD    S D++ +  +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD-IASKDLVSWTVMI 572

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y  HG   EA+ +F++M+ A ++  + +FVS++ ACSH GLVD+G   F  M  +  +
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           +P+ + Y C+VDML+R G L  A   IE MP  P  T++ +LL GCRIH + +L E  +E
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692

Query: 744 KLLLLLPKNDAAHVLLS------------KRKRQREGN 769
           K+  L P+N   +VL++            KR R+R G 
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/651 (25%), Positives = 294/651 (45%), Gaps = 8/651 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP  L   L L  + KS   G +V   I   GF  D  L + L  MY+ CG      RVF
Sbjct: 93  DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DE+     + W ++++   ++G+F   + ++  M ++G   + +    V K   S+ +  
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H F LK    +   VG S++ FY K   V +A +VF  ++  DV  WN++I GY 
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   + L+V   ML  GI +D  T ++   GC+      +GR +H + +++       
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             N L+DMY K   +D A  VF  M+D+ V+S+ ++  G++     G+   LF +    G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+  T + +L  C +   LD G ++           +  V+++L+ M+ +CG+++ A 
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRS 461
            VF  +  K+I +WN ++ GY  NC   + L  F  + E      +  T   V+  C   
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
                  +IHG I++ G+ S  ++ +SL+  Y   G L  +    +     D+ SW  M+
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ---RTKSIHPFVIKL 578
           +     G   EA+ +F+ + +AG + DE    ++L +C+  G      R  +I     K+
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               E Y  + ++D  A+ GD+  A    +      D  ++  L+     H  V  A ++
Sbjct: 633 EPTVEHY--ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +  K+  L+P    +  +M+    +    +     +    Q G++ +P C
Sbjct: 691 AE--KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 204/434 (47%), Gaps = 14/434 (3%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQI------HGLIIRSEVECSISIVNALIDMYIKSSGM 297
           +D  T  + LQ C+       G+++      +G +I S +   +S+      MY     +
Sbjct: 92  IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL------MYTNCGDL 145

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A +VF+ +  +  + WN L    +++ +   +  LF K + SG   +  TFS + +  
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  +  G QL    L  GF +  +V +SL+  + +   V+ A  VFD ++ +++ +WN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++GY  N      L  F  +  SG+E++  T   V   C  S    +   +H   +K 
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
            FS     C++L+  Y   G LD++           + S+ +M++    +G   EAV +F
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             + E G  PD Y +  +LN CA        K +H ++ +     +++V++A++D YAKC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD-KMKLANLQPSQATFVS 656
           G ++ A + F +     D+I +NT+I  Y+ +   +EA+ +F+  ++     P + T   
Sbjct: 446 GSMQEAELVFSE-MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504

Query: 657 VMSACSHKGLVDKG 670
           V+ AC+     DKG
Sbjct: 505 VLPACASLSAFDKG 518


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 170/537 (31%), Positives = 299/537 (55%), Gaps = 8/537 (1%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EALN+   +   G   D  +    L+ C  + D  +G+Q+H   I+      +S+  +L+
Sbjct: 75  EALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLV 134

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY+K+  ++   +VF+ M  K+V+SW +L  G+ +N    Q   LF +  L G +PN  
Sbjct: 135 DMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPF 194

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF+ +L        ++ G+Q+  + +  G      V +S++ M+ +   V  A +VFD++
Sbjct: 195 TFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSM 254

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +N  +WN +++G+  N  D +  + F  +   GV++    F  V++ C   +      
Sbjct: 255 ENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAK 314

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF---SNGAERLDMASWGAMMSALV 525
           Q+H  +IK G      I ++L+ +Y    ++D++F+     +G +  ++ SW A++S  V
Sbjct: 315 QLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQ--NVVSWTAIISGYV 372

Query: 526 HQGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAA-IGAYQRTKSIHPFVIKLGFNTE 583
             G    A+ +F  +  E G +P+E+   ++LN+CAA   + ++ K  H   IK GF+  
Sbjct: 373 QNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA 432

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + V+SA++  YAK G+I+ A   F +  +  D++ +N++I  YA HG   ++++IF++M+
Sbjct: 433 LCVSSALVTMYAKRGNIESANEVFKRQVD-RDLVSWNSMISGYAQHGCGKKSLKIFEEMR 491

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
             NL+    TF+ V+SAC+H GLV++G   F  M   Y + P+ + Y C+VD+ SR G L
Sbjct: 492 SKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGML 551

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E A  +I  MPF    T++R+LL+ CR+H N +LGE A+EKL+ L P++ AA+VLLS
Sbjct: 552 EKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 608



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 212/402 (52%), Gaps = 3/402 (0%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R++G QVH   +K GF  D+ +  +L+ MY K      G RVFDEM  +N+VSWT +++ 
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             QNG  +  LK++  M+  G  PN F   +V+    + GA E G  +H   +K  ++  
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FVG S++N Y+K   V+ A+ VF S+ + +   WN+MI G+   G   EA  +   M  
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+ + +  F   ++ C+ + +    +Q+H  +I++  +  ++I  AL+  Y K S +D 
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347

Query: 300 AFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQC 357
           AFK+F  M   ++V+SW  +  G+ +N    +  +LF +     G  PN  TFS +L  C
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC 407

Query: 358 -GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
                 ++ G Q    ++  GF +   V+S+L+ M+ + G +E A+ VF     +++ +W
Sbjct: 408 AAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSW 467

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           N ++SGY  + C    LK F  +    +E++G TF  V+  C
Sbjct: 468 NSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISAC 509



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/567 (24%), Positives = 270/567 (47%), Gaps = 12/567 (2%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FDE  ++ L     ++    +N +    L +++ ++ +G   +  ++  V+KVC  + 
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +HC  +K    ++  VG S+++ Y K   V   ERVF  +   +V  W +++ 
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G   +AL + S M  EGI  + +TF   L G +     + G Q+H ++I+S ++ 
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +I + N++++MY KS  +  A  VF+ M +++ +SWN++  GF  N    +   LF++  
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G +     F+ +++ C  + ++    QL C  +  G   + N+ ++L+  + +C  ++
Sbjct: 287 LEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVET 457
            A  +F  +   +N+ +W  ++SGY  N      +  FC +  E GVE N  TF  V+  
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406

Query: 458 CCRSENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMA 515
           C         G Q H   IK+GFS+   + S+L+  Y   G ++++ E F    +R D+ 
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDR-DLV 465

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW +M+S     G   +++ IF  +     + D      ++++C   G     +     +
Sbjct: 466 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM 525

Query: 576 IK---LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
           +K   +    E Y  S ++D Y++ G ++ A    ++        ++ TL+ A   H  +
Sbjct: 526 VKDYHIVPTMEHY--SCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVH--L 581

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  +      KL +LQP  +    ++S
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLS 608



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 134/281 (47%), Gaps = 5/281 (1%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
             A  + L  N+K      Q+H  ++K G   D+ ++  L+  YSKC       ++F  M
Sbjct: 296 IFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMM 355

Query: 106 -AERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS-E 162
              +N+VSWT I+S  +QNG  D  + ++  M +  G  PNEF   SV+  C +  AS E
Sbjct: 356 HGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVE 415

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H  ++K        V  +++  YAK G++ +A  VF      D+  WN+MI GYA
Sbjct: 416 QGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYA 475

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSI 281
             G G ++L +   M  + + +D  TFI  +  C+     + G++   L+++   +  ++
Sbjct: 476 QHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTM 535

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
              + ++D+Y ++  ++ A  +  +M        W TL   
Sbjct: 536 EHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAA 576


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 188/655 (28%), Positives = 340/655 (51%), Gaps = 14/655 (2%)

Query: 116 IVSAAIQNGEFDMGLK----MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           I  +AIQ      G+K    + VD KT+  +  +  V  +++ CV     +   ++H F 
Sbjct: 37  ITHSAIQKPFATSGIKTPNSVKVD-KTDSHLQIQPLV-DLLRDCVDARFLKQAKTVHGFL 94

Query: 172 LKIRIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
           LK +   +  +     V + Y+K  D+ AA R+F  +S  +   W  +I G A  G   +
Sbjct: 95  LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLD 154

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
                  M  +GI  D++ +   LQ C  +   ++G  +H  I+         +  AL++
Sbjct: 155 GFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN 214

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ ++KVF  M + +V+SWN +  GF+ N        LF + +  G  P+  T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN-- 407
           F  + +  G L D++   ++   AL  G      V ++LI M  +CG+++ A S+F++  
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++ +    WN ++SGY  +  +   L+ F  + ++ + ++  T+  V       +   + 
Sbjct: 335 ITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLG 394

Query: 468 GQIHGAIIKTGFSSCGY--ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
            ++H   IK+G     Y  I +++  +Y   G L++  +  N  E  D+ SW ++++A  
Sbjct: 395 KKVHARAIKSGLE-VNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS 453

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
                 +A+ IF ++   G  P+++   ++L SCA +   +  + +H  + K+G + +  
Sbjct: 454 QCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + SA++D YAKCG +  A+  F++  N+ D + +  +I  +A HG+V +A+++F +M   
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQHGIVDDALQLFRRMVQL 572

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P+  TF+ V+ ACSH GLV++G   FK M   YG+ P  + Y C+VD+LSR G+L D
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLND 632

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A   I  MP +P+  V+++LL  CR+HGN ELGE A++K+L    +N A +VLLS
Sbjct: 633 AMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLS 687



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 170/685 (24%), Positives = 321/685 (46%), Gaps = 22/685 (3%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVL--GTQVHGHIVKLGFTN--DIFLQNNLIAMYSK 91
           +DS L+  P+       L + + +R L     VHG ++K  F+N   + L N++   YSK
Sbjct: 62  TDSHLQIQPLVDL----LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSK 117

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C       R+FD+M++RN  SWT++++   +NG F  G + + +M++ G  P++FA   +
Sbjct: 118 CSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGI 177

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +++C+ + + E G  +H   +      + FV  ++LN YAKL ++  + +VF +++  +V
Sbjct: 178 LQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNV 237

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI G+       +A ++   M+ EG+T D  TFI   +   ++ D +  +++ G 
Sbjct: 238 VSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGY 297

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGGFSENKNPG 329
            +   V+ +  +  ALIDM  K   +  A  +F    +  +    WN +  G+  +    
Sbjct: 298 ALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSL 388
           +   LF K   +    +H T+  +      L  L LG ++   A+  G  ++  ++++++
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESGVEVN 447
              + +CG++E    VF+ +  +++ +W  L++ Y   C + D  ++ F N+   G+  N
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS-QCSEWDKAIEIFSNMRAEGIAPN 476

Query: 448 GCTFFYVVETC---CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             TF  V+ +C   C  E  Q   Q+HG I K G      I S+L+  Y   G L ++ +
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQ---QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             N     D  SW A+++     G   +A+ +F  +V+ G +P+      +L +C+  G 
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593

Query: 565 YQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
            +        + K  G   E+   + ++D  ++ G +  A     +     + +V+ TL+
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLL 653

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            A   HG V E  E+  +  L+    + AT+V + +     G    G  L   M  Q G+
Sbjct: 654 GACRVHGNV-ELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQ-GV 711

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKH 708
           +  P C    V+      Y  D +H
Sbjct: 712 KKEPGCSWISVNGTLHKFYAGDQQH 736


>gi|302806575|ref|XP_002985037.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
 gi|300147247|gb|EFJ13912.1| hypothetical protein SELMODRAFT_121365 [Selaginella moellendorffii]
          Length = 763

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 191/694 (27%), Positives = 339/694 (48%), Gaps = 10/694 (1%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           ND +  N+L+ MY+KCG        F+++  R+ VSWT ++ A  +NG     L+++  M
Sbjct: 65  NDSYALNSLVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRM 124

Query: 137 KTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
              G +P+     + +  C S+    E G  +H  +     +  PFV  ++++ Y+K G 
Sbjct: 125 ADEGCLPDGRTYLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGS 184

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +  A++VF S  + D   W AM+ GYA  G    AL++ + M  +G   ++  + + L+ 
Sbjct: 185 LLDAKKVFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRE 244

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C      + G +IH  +I  E +   +I N L+ MY K   +  A K F  +  ++ +SW
Sbjct: 245 CISGRALERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSW 304

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPN--HVTFSILLRQCGKLLDLDLGLQLQCLA 373
             +   + ++    Q   LFH   L G++ +    T S +L  C  L     G  +    
Sbjct: 305 TVMLAAYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARL 364

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           + CG+  +  + ++L+ M+ +C  +E A  VFDN+  K+  +W  ++S Y  +    + L
Sbjct: 365 VACGYELDIPLQNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESL 424

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQ---MVGQ-IHGAIIKTGFSSCGYICSSL 489
           K F  +   G++ +  T   +   CC+ E++     VG+ +H  I   G      + ++L
Sbjct: 425 KMFLAMNLDGMQPDEMTLSALCAACCQLEDRGRGLAVGRGVHTRIRVAGHDQNPVVGTAL 484

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G L  +    N     D+ SW AM++A V  G   EA+ +   +   G  PD 
Sbjct: 485 VCMYARCGCLLEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDA 544

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD- 608
                ++ +C+A+     ++++H  V   G +      +A++  YAKCG +  A   F+ 
Sbjct: 545 ATFAVVVAACSALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFER 604

Query: 609 -QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            Q  +   V  +N+++ A A HG  + A+E F  M +A +QP   T   ++ ACSH GL+
Sbjct: 605 MQRHSVLAVAAWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSGLL 664

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
             G   F SM   +G+ P+ + Y CL+D+L R G   +A+ VI  MPF P    +++LL+
Sbjct: 665 ATGLDYFLSMLHDFGLAPAAEHYACLIDLLGRAGVGAEAEEVIRGMPFAPDNVAWKTLLA 724

Query: 728 GCRIHGNKELGEWASEKLLLLLP-KNDAAHVLLS 760
            C+   +   G  A+ +L+ + P  +D+++VLLS
Sbjct: 725 SCQTSKDAGRGSRAAMQLIRMDPLLHDSSYVLLS 758



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 250/528 (47%), Gaps = 11/528 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           +LA  ++ +  L+    G  VH      G  +  F+ N LI MYSKCG      +VFD  
Sbjct: 136 YLAALVACASLLRCLERGMDVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKKVFDST 195

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R+ V+WT ++    +NGE +  L ++  M+  G M N  A  S+++ C+S  A E G 
Sbjct: 196 QARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRALERGA 255

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH   + I  +K+  +G  ++  YAK GD+  A + FYSI   +   W  M+  Y   G
Sbjct: 256 RIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAFYSIERRNSVSWTVMLAAYIDHG 315

Query: 226 YGFEALNVVSSMLFEGIT--MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
              + L +  +M  EG    MD +T    L  CS +     G+ IH  ++    E  I +
Sbjct: 316 KQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPL 375

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+ MY K   ++ A +VF+ + DK  +SW ++   + +++   ++  +F    L G 
Sbjct: 376 QNALVTMYAKCHCLEEARRVFDNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGM 435

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-----CGFLDEENVTSSLIYMFCRCGAV 398
           +P+ +T S L   C +L D   GL +    +H      G      V ++L+ M+ RCG +
Sbjct: 436 QPDEMTLSALCAACCQLEDRGRGLAVG-RGVHTRIRVAGHDQNPVVGTALVCMYARCGCL 494

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A +VF+ ++ K++ +WN +L+         + L+    +   GV  +  TF  VV  C
Sbjct: 495 LEAAAVFNKLTPKDVVSWNAMLTATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAAC 554

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMA 515
              +++     +H  +   G        ++L+  Y   G+LD++   FE       L +A
Sbjct: 555 SALKDEATSRAVHTEVAARGLDGHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVA 614

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +W ++++AL   GH   AV  F  +  A  +PD   +  +L++C+  G
Sbjct: 615 AWNSILAALAKHGHGATAVEFFRVMTMAYVQPDGITITVMLHACSHSG 662



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 178/386 (46%), Gaps = 15/386 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+  LS   +L +   G  +H  +V  G+  DI LQN L+ MY+KC       RVF
Sbjct: 337 DAFTLSCVLSACSSLGAGAEGQAIHARLVACGYELDIPLQNALVTMYAKCHCLEEARRVF 396

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D + +++ VSWT I+SA +Q+   D  LKM++ M  +G  P+E  + ++   C  +    
Sbjct: 397 DNIQDKSRVSWTSIISAYVQHERGDESLKMFLAMNLDGMQPDEMTLSALCAACCQLEDRG 456

Query: 163 FGYSI-HCFALKIRI---EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            G ++      +IR+   ++NP VG +++  YA+ G +  A  VF  ++  DV  WNAM+
Sbjct: 457 RGLAVGRGVHTRIRVAGHDQNPVVGTALVCMYARCGCLLEAAAVFNKLTPKDVVSWNAML 516

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
                 G   EAL +   M  EG+  D  TF   +  CS + D    R +H  +    ++
Sbjct: 517 TATVEAGEAEEALRLHQRMRAEGVMPDAATFAVVVAACSALKDEATSRAVHTEVAARGLD 576

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI---SWNTLFGGFSENKNPGQTASLF 335
                  AL+ MY K   +D A  VFERM    V+   +WN++    +++ +       F
Sbjct: 577 GHPVSGTALVCMYAKCGRLDDATTVFERMQRHSVLAVAAWNSILAALAKHGHGATAVEFF 636

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMFCR 394
               ++  +P+ +T +++L  C     L  GL      LH  G        + LI +  R
Sbjct: 637 RVMTMAYVQPDGITITVMLHACSHSGLLATGLDYFLSMLHDFGLAPAAEHYACLIDLLGR 696

Query: 395 CGAVEMAHSVF-------DNVSYKNI 413
            G    A  V        DNV++K +
Sbjct: 697 AGVGAEAEEVIRGMPFAPDNVAWKTL 722



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 162/389 (41%), Gaps = 51/389 (13%)

Query: 370 QCLALHCGFLD-----EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE------ 418
           +C ALH G ++     +  V +++I +F RCG++  A +VFD +  +++ +WN+      
Sbjct: 13  KCCALHAGAVEIGAESDTFVANTVIDVFSRCGSLVNARNVFDRMVRRDVVSWNDSYALNS 72

Query: 419 -------------------------------LLSGYCFNCCDADVLKTFCNIWESGVEVN 447
                                          L+  Y  N    + L+ F  + + G   +
Sbjct: 73  LVNMYAKCGSLVEARAEFEKLQRRDAVSWTTLILAYTENGRGGEALELFSRMADEGCLPD 132

Query: 448 GCTFFYVVETCC---RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           G T+   +  C    R   + M   +H     +G  S  ++ ++LI  Y   G L ++ +
Sbjct: 133 GRTYLAALVACASLLRCLERGM--DVHSQSRTSGCDSVPFVANTLIDMYSKCGSLLDAKK 190

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +  +  D  +W AMM      G    A+ +F  + + G   +     ++L  C +  A
Sbjct: 191 VFDSTQARDAVAWTAMMLGYAENGEAERALHLFACMEQQGCMYNREAYTSLLRECISGRA 250

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +R   IH  +I +  + +  + + ++  YAKCGD+  AR AF  S    + + +  ++ 
Sbjct: 251 LERGARIHARLIAIEKDKDTAIGNLLVQMYAKCGDLHRARKAF-YSIERRNSVSWTVMLA 309

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFV--SVMSACSHKGLVDKGCLLFKSMDSQYG 682
           AY  HG   + + +F  M L   Q     F    V+SACS  G   +G  +   + +  G
Sbjct: 310 AYIDHGKQEQGLCLFHTMDLEGAQADMDAFTLSCVLSACSSLGAGAEGQAIHARLVA-CG 368

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            +        LV M ++   LE+A+ V +
Sbjct: 369 YELDIPLQNALVTMYAKCHCLEEARRVFD 397


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 190/668 (28%), Positives = 334/668 (50%), Gaps = 29/668 (4%)

Query: 136 MKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           M  +G  P +     S++K C+       G  +H   ++  IE +  +  S+++ Y+K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111

Query: 195 DVAAAERVFYSIS---SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           D A AE VF ++      DV  W+AM+  Y + G   +A+ V    L  G+  + Y +  
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171

Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK-SSGMDYAFKVFERMAD 309
            ++ CS      +GR   G ++++   E  + +  +LIDM++K  +  + A+KVF++M++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +V++W  +     +   P +    F   +LSG   +  T S +   C +L +L LG QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
              A+  G +D+  V  SL+ M+ +C   G+V+    VFD +   ++ +W  L++GY  N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349

Query: 427 CCDA-DVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           C  A + +  F  +   G VE N  TF    + C    + ++  Q+ G   K G +S   
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +S+I  +V   +++++          ++ S+   +       +  +A  +   + E  
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
                +   ++L+  A +G+ ++ + IH  V+KLG +    V +A+I  Y+KCG I  A 
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+   N N VI + ++I  +A HG     +E F++M    ++P++ T+V+++SACSH 
Sbjct: 530 RVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV +G   F SM   + ++P  + Y C+VD+L R G L DA   I  MPFQ    V+R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNL 770
            L  CR+H N ELG+ A+ K+L L P   AA++ LS               R++ +E NL
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708

Query: 771 LDHEGVCN 778
           +  EG C+
Sbjct: 709 V-KEGGCS 715



 Score =  235 bits (600), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 161/545 (29%), Positives = 261/545 (47%), Gaps = 26/545 (4%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
            + +D I    S++ S  LKS +      LG  VH  +++     D  L N+LI++YSK 
Sbjct: 51  LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110

Query: 93  GYFGWGLRVFDEM---AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           G       VF+ M    +R++VSW+ +++    NG     +K++V+    G +PN++   
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170

Query: 150 SVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSIS 207
           +V++ C +      G     F +K    E +  VGCS+++ + K       A +VF  +S
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             +V  W  MI      G+  EA+     M+  G   DK+T  +    C+ + +  +G+Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290

Query: 268 IHGLIIRS----EVECSISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLFG 320
           +H   IRS    +VECS      L+DMY K S    +D   KVF+RM D  V+SW  L  
Sbjct: 291 LHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344

Query: 321 GFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           G+ +N N    A +LF + I  G   PNH TFS   + CG L D  +G Q+   A   G 
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
               +V +S+I MF +   +E A   F+++S KN+ ++N  L G C N       K    
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           I E  + V+  TF  ++       + +   QIH  ++K G S    +C++LI  Y   G 
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +D +    N  E  ++ SW +M++     G     +  F+ ++E G KP+E     IL++
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584

Query: 559 CAAIG 563
           C+ +G
Sbjct: 585 CSHVG 589



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 2/268 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL    +G QV G   K G  ++  + N++I+M+ K        R F+ ++E+NLVS+  
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            +    +N  F+   K+  ++       + F   S++    ++G+   G  IH   +K+ 
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  V  ++++ Y+K G +  A RVF  + + +V  W +MI G+A  G+    L   +
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKS 294
            M+ EG+  ++ T++  L  CS V     G R  + +    +++  +     ++D+  ++
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFGG 321
             +  AF+    M    DV+ W T  G 
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGA 652



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 62/119 (52%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            A  LS   N+ S   G Q+H  +VKLG + +  + N LI+MYSKCG      RVF+ M 
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            RN++SWT +++   ++G     L+ +  M   G  PNE    +++  C  +G    G+
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 174/573 (30%), Positives = 296/573 (51%), Gaps = 30/573 (5%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYT 248
           YA  G V  A ++F  +S   +  WNA+I  Y   G+ F+AL V  SM+  G    DKYT
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYT 186

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           F   ++ CS+++  ++G  IHG  + S    ++ + N+L+ MY+    +  A +VF  M 
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            + V+SWNT+  G+ +N  P +  ++F+  + +   P+  T    L  CG L +L+LG++
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIK 306

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  L       ++  V ++L+ M+ RCG ++ A  VF     K++ TW  +++GY  N  
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGN 366

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L     +   GV  N  T   ++  C                            +S
Sbjct: 367 AKSALALCPAMQLDGVVPNAVTLASLLSAC----------------------------AS 398

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L   Y     +  SF+      +     W A++S L+H     EAV +F S++    + +
Sbjct: 399 LCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 458

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                +++ + A +   ++  ++H ++++ GF +++ V + +ID Y+KCG +  A   FD
Sbjct: 459 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 518

Query: 609 QSFNS-NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           +  N   D+IV++ LI  Y  HG    A+ +F++M  + +QP++ TF SV+ ACSH+GLV
Sbjct: 519 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 578

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D G  LFK M   Y   P P+ Y C+VD+L R G L++A  +I+ MPFQ + +++ +LL 
Sbjct: 579 DDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLG 638

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C IH N ELGE A+E+L  L P++   ++LL+
Sbjct: 639 ACLIHQNVELGEVAAERLFELEPESTGNYILLA 671



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 167/593 (28%), Positives = 272/593 (45%), Gaps = 56/593 (9%)

Query: 28  LCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF---TNDIFLQNN 84
           L  N   C DS LR      A + SL+   K+++L    HGH +  G     N I L ++
Sbjct: 75  LIANVHRC-DSLLRH----YAATRSLN---KTKIL----HGHTITSGLLHSPNFIHLPSH 122

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG-EFDMGLKMYVDMKTNG-FM 142
           L   Y+ CG      ++FD++++ +L  W  I+   +  G  FD  L+++  M  +G F 
Sbjct: 123 LAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFD-ALRVFDSMICSGKFW 181

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+++    V+K C  M     G  IH  AL      N FV  S+L  Y   G V  A +V
Sbjct: 182 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 241

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +    V  WN MI G+   G   EAL V +SM+   +  D  T ++AL  C  + + 
Sbjct: 242 FNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKEL 301

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           ++G ++H L+ ++ ++  I + NAL+DMY +  G+D A  VF    +KDVI+W ++  G+
Sbjct: 302 ELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGY 361

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
             N N     +L     L G  PN VT + LL  C                         
Sbjct: 362 IMNGNAKSALALCPAMQLDGVVPNAVTLASLLSAC------------------------- 396

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
              +SL YM+ +C AV  +  VF   S K    WN LLSG   N    + +  F ++   
Sbjct: 397 ---ASLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIE 453

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            VE N  TF  V+       + + V  +H  ++++GF S   + + LI  Y   G LD +
Sbjct: 454 EVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYA 513

Query: 503 ---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
              F+     E+ D+  W  +++     GH   AV +F+ +V +G +P+E    ++L++C
Sbjct: 514 HKIFDEIPNKEK-DIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHAC 572

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
           +  G      ++  ++I      E Y +S + + Y    D+ G     D++++
Sbjct: 573 SHRGLVDDGLTLFKYMI------ENYPSSPLPNHYTCVVDLLGRAGRLDEAYD 619



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/583 (24%), Positives = 257/583 (44%), Gaps = 55/583 (9%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHG 68
           ++ DK   HF A R     +C + +F  D +    P+ + K+ S+   L    +G  +HG
Sbjct: 157 MYVDK-GFHFDALRVFDSMIC-SGKFWPDKY--TFPLVI-KACSVMSMLN---VGVLIHG 208

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
             +  GF++++F+QN+L+AMY  CG  G   +VF+ M +R++VSW  ++S   QNG  + 
Sbjct: 209 RALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEE 268

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L ++  M      P+   + S +  C  +   E G  +H    K  +++   V  ++++
Sbjct: 269 ALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVD 328

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y++ G +  A  VF      DV  W +MI GY   G    AL +  +M  +G+  +  T
Sbjct: 329 MYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVT 388

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
             + L  C+                            +L  MY K + + Y+F+VF + +
Sbjct: 389 LASLLSACA----------------------------SLCYMYAKCNAVSYSFQVFAKTS 420

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            K  + WN L  G   N+   +   LF   ++     NH TF+ ++     L DL   + 
Sbjct: 421 KKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMN 480

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYCFN 426
           L    +  GF+ +  V + LI M+ +CG+++ AH +FD +    K+I  W+ L++GY  +
Sbjct: 481 LHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 540

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
                 +  F  +  SG++ N  TF  V+  C         G +   +    +    Y  
Sbjct: 541 GHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR------GLVDDGLTLFKYMIENYPS 594

Query: 487 SSLIKSYV-------NFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIF 537
           S L   Y          G+LD +++       + + + WGA++ A L+HQ      V   
Sbjct: 595 SPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAE 654

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
                  E    YIL  + N  AA+G ++  +++   + K+G 
Sbjct: 655 RLFELEPESTGNYIL--LANIYAAVGRWKDAENVRHIMSKIGL 695



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 138/281 (49%), Gaps = 9/281 (3%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCG---YICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           RS N+  +  +HG  I +G        ++ S L  SY   G +  + +  +      +  
Sbjct: 93  RSLNKTKI--LHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFL 150

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           W A++   V +G + +A+ +F S++ +G+  PD+Y    ++ +C+ +        IH   
Sbjct: 151 WNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRA 210

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           +  GF++ ++V ++++  Y  CG +  AR  F+     + V+ +NT+I  +  +G   EA
Sbjct: 211 LVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRS-VVSWNTMISGWFQNGRPEEA 269

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           + +F+ M  A ++P  AT VS + +C +   ++ G  + K +   + +Q   +    LVD
Sbjct: 270 LAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNH-LQEKIEVRNALVD 328

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M SR G +++A  V      +     + S+++G  ++GN +
Sbjct: 329 MYSRCGGIDEASLVFAETK-EKDVITWTSMINGYIMNGNAK 368


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 188/655 (28%), Positives = 340/655 (51%), Gaps = 14/655 (2%)

Query: 116 IVSAAIQNGEFDMGLK----MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           I  +AIQ      G+K    + VD KT+  +  +  V  +++ CV     +   ++H F 
Sbjct: 37  ITHSAIQKPFATSGIKTPNSVKVD-KTDSHLQIQPLV-DLLRDCVDARFLKQAKTVHGFL 94

Query: 172 LKIRIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
           LK +   +  +     V + Y+K  D+ AA R+F  +S  +   W  +I G A  G   +
Sbjct: 95  LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLD 154

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
                  M  +GI  D++ +   LQ C  +   ++G  +H  I+         +  AL++
Sbjct: 155 GFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN 214

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ ++KVF  M + +V+SWN +  GF+ N        LF + +  G  P+  T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN-- 407
           F  + +  G L D++   ++   AL  G      V ++LI M  +CG+++ A S+F++  
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           ++ +    WN ++SGY  +  +   L+ F  + ++ + ++  T+  V       +   + 
Sbjct: 335 ITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLG 394

Query: 468 GQIHGAIIKTGFSSCGY--ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
            ++H   IK+G     Y  I +++  +Y   G L++  +  N  E  D+ SW ++++A  
Sbjct: 395 KKVHARAIKSGLE-VNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS 453

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
                 +A+ IF ++   G  P+++   ++L SCA +   +  + +H  + K+G + +  
Sbjct: 454 QCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + SA++D YAKCG +  A+  F++  N+ D + +  +I  +A HG+V +A+++F +M   
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQHGIVDDALQLFRRMVQL 572

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P+  TF+ V+ ACSH GLV++G   FK M   YG+ P  + Y C+VD+LSR G+L D
Sbjct: 573 GVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLND 632

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A   I  MP +P+  V+++LL  CR+HGN ELGE A++K+L    +N A +VLLS
Sbjct: 633 AMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLS 687



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 170/685 (24%), Positives = 321/685 (46%), Gaps = 22/685 (3%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVL--GTQVHGHIVKLGFTN--DIFLQNNLIAMYSK 91
           +DS L+  P+       L + + +R L     VHG ++K  F+N   + L N++   YSK
Sbjct: 62  TDSHLQIQPLVDL----LRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSK 117

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C       R+FD+M++RN  SWT++++   +NG F  G + + +M++ G  P++FA   +
Sbjct: 118 CSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGI 177

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +++C+ + + E G  +H   +      + FV  ++LN YAKL ++  + +VF +++  +V
Sbjct: 178 LQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNV 237

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI G+       +A ++   M+ EG+T D  TFI   +   ++ D +  +++ G 
Sbjct: 238 VSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGY 297

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGGFSENKNPG 329
            +   V+ +  +  ALIDM  K   +  A  +F    +  +    WN +  G+  +    
Sbjct: 298 ALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNE 357

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSL 388
           +   LF K   +    +H T+  +      L  L LG ++   A+  G  ++  ++++++
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESGVEVN 447
              + +CG++E    VF+ +  +++ +W  L++ Y   C + D  ++ F N+   G+  N
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYS-QCSEWDKAIEIFSNMRAEGIAPN 476

Query: 448 GCTFFYVVETC---CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             TF  V+ +C   C  E  Q   Q+HG I K G      I S+L+  Y   G L ++ +
Sbjct: 477 QFTFSSVLVSCANLCLLEYGQ---QVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKK 533

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             N     D  SW A+++     G   +A+ +F  +V+ G +P+      +L +C+  G 
Sbjct: 534 VFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGL 593

Query: 565 YQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
            +        + K  G   E+   + ++D  ++ G +  A     +     + +V+ TL+
Sbjct: 594 VEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLL 653

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            A   HG V E  E+  +  L+    + AT+V + +     G    G  L   M  Q G+
Sbjct: 654 GACRVHGNV-ELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQ-GV 711

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKH 708
           +  P C    V+      Y  D +H
Sbjct: 712 KKEPGCSWISVNGTLHKFYAGDQQH 736


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 300/578 (51%), Gaps = 3/578 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+ + + G++  A  VF  +S  DV  WN ++GGYA  G   EALN+   ML+  
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  + YTF + L+ C+ V+D   G++IH  +IR   E  + + NALI MY+K   +  A 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F++M  +D ISWN +  G+ EN    +   LF         P+ +T + +   C  L 
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +  LG  +    +   F  + ++ +SLI M+   G +E A +VF  +  K++ +W  +++
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               +      ++T+  +   G+  +  T   V+  C    +  +  ++H   IKTG  S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SLI  Y     +DN+ E        ++ SW +++  L     + EA+  F  + 
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E+  KP+   L ++L++CA IGA  R K IH   ++ G   + ++ +A++D Y +CG   
Sbjct: 494 ES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F+      DV  +N L+  YA  G    A+E+FDKM    + P + TF+S++ AC
Sbjct: 553 PALNQFNS--QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCAC 610

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S  G+V +G   F  M ++Y + P+   Y C+VD+L R G L+DA   I+ MP +P   +
Sbjct: 611 SKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAI 670

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + +LL+ CRIH N ELGE A++++     K+   ++LL
Sbjct: 671 WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILL 708



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 281/617 (45%), Gaps = 15/617 (2%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           + L N L++M+ + G       VF +M+ER++ SW ++V    + G FD  L +Y  M  
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
               PN +   SV+K C  +     G  IH   ++   E +  VG +++  Y K GD++ 
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  +F  +   D   WNAMI GY   G G E L + S M    +  D  T       C L
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + +  +GR +HG +++SE    IS+ N+LI MY     ++ A  VF RM  KDV+SW  +
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
                 +K P +    +    L G  P+ +T   +L  C  +  LDLG++L  +A+  G 
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
           +    V++SLI M+ +C  V+ A  VF N+S KN+ +W  L+ G   N    + L  F  
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           + ES ++ N  T   V+  C R        +IH   ++TG    G++ ++++  YV  G+
Sbjct: 492 MKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
              +    N +++ D+ +W  +++    QG    AV +F  ++E    PDE    ++L +
Sbjct: 551 KVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609

Query: 559 CAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           C+  G    T+ +  F I   K      +   + V+D   + G +  A           D
Sbjct: 610 CSKSGMV--TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPD 667

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV---SVMSACSHKGLVDKGCL 672
             ++  L+ A   H  V E  EI  K        S   ++   ++ + C +   V K   
Sbjct: 668 AAIWGALLNACRIHRNV-ELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSK--- 723

Query: 673 LFKSMDSQYGMQPSPDC 689
             +S+  + G+   P C
Sbjct: 724 -VRSLMRERGLSADPGC 739



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 239/442 (54%), Gaps = 2/442 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +A+  + SML   I +++  +I  L+ C      D G +++ L+  S+    + + NAL+
Sbjct: 80  QAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALL 139

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            M+++   +  A+ VF +M+++DV SWN L GG+++     +  +L+H+ + +  RPN  
Sbjct: 140 SMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVY 199

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +L+ C  + D+  G ++    +  GF  + +V ++LI M+ +CG +  A  +FD +
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  N    + L+ F  + E  V+ +  T   V   C   +N+++  
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +HG ++K+ F     + +SLI+ Y + G+L+ +    +  E  D+ SW AM+++LV   
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +AV  +  +   G  PDE  L ++L++CA IG       +H   IK G  + V V++
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++ID Y+KC  +  A   F ++ +  +V+ + +LI+    +    EA+  F +MK  +++
Sbjct: 440 SLIDMYSKCKCVDNALEVF-RNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMK 497

Query: 649 PSQATFVSVMSACSHKGLVDKG 670
           P+  T +SV+SAC+  G + +G
Sbjct: 498 PNSVTLISVLSACARIGALMRG 519



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 228/469 (48%), Gaps = 16/469 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H+++ GF +D+ + N LI MY KCG       +FD+M +R+ +SW  ++S   +
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG    GL+++  M+     P+   + +V   C  +     G  +H + +K     +  +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  Y+ LG +  AE VF  + S DV  W AMI         F+A+     M  EGI
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+ T ++ L  C+ +   D+G ++H + I++ +   + + N+LIDMY K   +D A +
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALE 456

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  ++ K+V+SW +L  G   N N    A LF + +    +PN VT   +L  C ++  
Sbjct: 457 VFRNISGKNVVSWTSLILGLRIN-NRSFEALLFFRQMKESMKPNSVTLISVLSACARIGA 515

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++   AL  G   +  + ++++ M+ RCG    A + F N   K++T WN LL+G
Sbjct: 516 LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTG 574

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y         ++ F  + E  +  +  TF  ++  C +S      G +   +        
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS------GMVTEGLEYFNIMKN 628

Query: 483 GYICSSLIKSYV-------NFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
            Y  +  +K Y          GQLD++++F  +   R D A WGA+++A
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA 677



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 14/387 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I +    S  E L +  LG  VHG++VK  F  DI + N+LI MYS  G       VF
Sbjct: 298 DLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVF 357

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  +++VSWT ++++ + +      ++ Y  M+  G +P+E  + SV+  C  +G  +
Sbjct: 358 SRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLD 417

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H  A+K  +  +  V  S+++ Y+K   V  A  VF +IS  +V  W ++I G  
Sbjct: 418 LGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLR 477

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                FEAL     M  E +  +  T I+ L  C+ +     G++IH   +R+ V     
Sbjct: 478 INNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF 536

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++DMY++      A   F     KDV +WN L  G+++         LF K +   
Sbjct: 537 LPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCG 396
             P+ +TF  LL  C K      G+  + L       ++ N+T +L +  C      R G
Sbjct: 596 IHPDEITFISLLCACSK-----SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 397 AVEMAHSVFDNVSYK-NITTWNELLSG 422
            ++ A+    ++  + +   W  LL+ 
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNA 677



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + L   LS    + + + G ++H H ++ G   D FL N ++ MY +CG     L
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+   ++++ +W ++++   Q G+  + ++++  M      P+E    S++  C   G
Sbjct: 556 NQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 171/628 (27%), Positives = 324/628 (51%), Gaps = 11/628 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M T   +P       +++ C++  + + G  IH   + + ++ + F+  +++N Y     
Sbjct: 1   MDTRKLLP-------LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHL 53

Query: 196 VAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINAL 253
              A+ VF ++ +  ++  WN ++ GY       EAL +   +L +  +  D YT+ + L
Sbjct: 54  YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVL 113

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + C  +  + +G+ IH  ++++ +   I + ++L+ MY K +  + A  +F  M +KDV 
Sbjct: 114 KACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVA 173

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
            WNT+   + ++ N  +    F      G  PN VT +  +  C +LLDL+ G+++    
Sbjct: 174 CWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           ++ GFL +  ++S+L+ M+ +CG +EMA  VF+ +  K +  WN ++SGY         +
Sbjct: 234 INSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCI 293

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  ++  GV+    T   ++  C RS        +HG  I+    S  +I SSL+  Y
Sbjct: 294 QLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLY 353

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G+++ +        +  + SW  M+S  V +G   EA+ +F  + ++  +PD     
Sbjct: 354 FKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFT 413

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L +C+ + A ++ + IH  +I+   +    V  A++D YAKCG +  A   F +    
Sbjct: 414 SVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVF-KCLPK 472

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D++ + ++I AY  HG    A+E+F +M  +N++P + TF++++SAC H GLVD+GC  
Sbjct: 473 RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYY 532

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIH 732
           F  M + YG+ P  + Y CL+D+L R G L +A  +++  P  +    +  +L S CR+H
Sbjct: 533 FNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 733 GNKELGEWASEKLLLLLPKNDAAHVLLS 760
            N +LG   +  L+   P + + ++LLS
Sbjct: 593 RNIDLGAEIARTLIDKDPDDSSTYILLS 620



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 170/661 (25%), Positives = 291/661 (44%), Gaps = 12/661 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS-WT 114
           N KS   G  +H  +V LG  NDIFL  NLI +Y  C  +     VFD M     +S W 
Sbjct: 15  NSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWN 74

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
            +++   +N  +   L+++  +    ++ P+ +   SV+K C  +     G  IH   +K
Sbjct: 75  GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVK 134

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  +  VG S++  YAK      A  +F  +   DV CWN +I  Y   G   EAL  
Sbjct: 135 TGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEY 194

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M   G   +  T   A+  C+ + D + G +IH  +I S       I +AL+DMY K
Sbjct: 195 FGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGK 254

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A +VFE+M  K V++WN++  G+    +      LF +    G +P   T S L
Sbjct: 255 CGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSL 314

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           +  C +   L  G  +    +      +  + SSL+ ++ +CG VE+A ++F  +    +
Sbjct: 315 IMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKV 374

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN ++SGY       + L  F  + +S VE +  TF  V+  C +    +   +IH  
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNL 434

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           II+    +   +  +L+  Y   G +D +F       + D+ SW +M++A    G  + A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVA 494

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVID 592
           + +F  ++++  KPD      IL++C   G         +  V   G    V   S +ID
Sbjct: 495 LELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLID 554

Query: 593 AYAKCGDIKGARMAFDQSFN-SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
              + G +  A     Q+    +DV + +TL  A   H  +    EI     L +  P  
Sbjct: 555 LLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEI--ARTLIDKDPDD 612

Query: 652 AT---FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           ++    +S M A +HK        + +S   + G++ +P C    ++      ++ED  H
Sbjct: 613 SSTYILLSNMYASAHKW---DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSH 669

Query: 709 V 709
           +
Sbjct: 670 L 670



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/557 (24%), Positives = 251/557 (45%), Gaps = 26/557 (4%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L+ D       L     L   VLG  +H  +VK G   DI + ++L+ MY+KC  F   
Sbjct: 101 YLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKA 160

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + +F+EM E+++  W  ++S   Q+G F   L+ +  M+  GF PN   + + +  C  +
Sbjct: 161 IWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARL 220

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  IH   +      + F+  ++++ Y K G +  A  VF  +    V  WN+MI
Sbjct: 221 LDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMI 280

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G     + +   M  EG+     T  + +  CS  A    G+ +HG  IR+ ++
Sbjct: 281 SGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + I ++L+D+Y K   ++ A  +F+ +    V+SWN +  G+       +   LF + 
Sbjct: 341 SDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEM 400

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S   P+ +TF+ +L  C +L  L+ G ++  L +     + E V  +L+ M+ +CGAV
Sbjct: 401 RKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAV 460

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A SVF  +  +++ +W  +++ Y  +      L+ F  + +S ++ +  TF  ++  C
Sbjct: 461 DEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSAC 520

Query: 459 ---------CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SN 507
                    C   NQ +   ++G I +    SC      LI      G+L  ++E    N
Sbjct: 521 GHAGLVDEGCYYFNQMV--NVYGIIPRVEHYSC------LIDLLGRAGRLHEAYEILQQN 572

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE---YILGTILNSCAAIGA 564
              R D+     + SA     +      I  +L++  + PD+   YIL  + N  A+   
Sbjct: 573 PEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID--KDPDDSSTYIL--LSNMYASAHK 628

Query: 565 YQRTKSIHPFVIKLGFN 581
           +   + +   + +LG  
Sbjct: 629 WDEVRVVRSKMKELGLK 645



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S++  D I     L+    L +   G ++H  I++    N+  +   L+ MY+KCG    
Sbjct: 403 SYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-- 155
              VF  + +R+LVSWT +++A   +G+  + L+++ +M  +   P+     +++  C  
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGH 522

Query: 156 ---VSMGASEFGYSIHCFALKIRIE 177
              V  G   F   ++ + +  R+E
Sbjct: 523 AGLVDEGCYYFNQMVNVYGIIPRVE 547


>gi|302787038|ref|XP_002975289.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
 gi|300156863|gb|EFJ23490.1| hypothetical protein SELMODRAFT_10002 [Selaginella moellendorffii]
          Length = 730

 Score =  303 bits (775), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 177/734 (24%), Positives = 351/734 (47%), Gaps = 45/734 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  + + G  ++  L N L+ MY KCG        FD +AE+N+ SW++I+    ++ 
Sbjct: 2   RIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRHR 61

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++  M      PN     + +  C S    E G  IH   +   +E    +  
Sbjct: 62  LSREAIELFHAMDVR---PNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLAN 118

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++ Y+  G +  A+R F  ++  +V  WN +I  ++  G+  EA+++   M  +G   
Sbjct: 119 SLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFKP 178

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D+ +F++    CS++ D   GR+IH       ++  +SI N L++MY +   +D A  VF
Sbjct: 179 DRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLVF 238

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + +  ++++SW ++   +++         +F K    G  PN VTF  +L  C +   L 
Sbjct: 239 DSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARALK 295

Query: 365 LGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELL 420
              ++  L L  G L+++ +T  + LI  + +CG++  A +VF++++   +N+ TW  ++
Sbjct: 296 QAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSII 355

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +         + L  F  +   G+  N  TF  V+  C    + +    +HG I+  G+ 
Sbjct: 356 AACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGYD 415

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH-- 538
               +C+ LI  +   G L+++          ++ +W  M+ A + Q    +AV++F   
Sbjct: 416 RDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLFQQM 475

Query: 539 ------------SLVEA--------------------GEKPDEYILGTILNSCAAIGAYQ 566
                       ++V A                    G  PDE     +L++C+ +GA +
Sbjct: 476 ERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMGAKK 535

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
              +I   +++ G  +   + + ++  Y  CG    A+M F ++    D   +N  I   
Sbjct: 536 EGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVF-ENLAERDSAAWNAAIGVS 594

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             HG   E++ +F++M L  ++P + TF +V+ +CSH G +++    F  M   +GM+P+
Sbjct: 595 GQHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSGEIERAWRWFLVMRGDHGMEPN 654

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            + +GCL D+  R G++++A+ ++  +P   +   + +LLSGC++HG+    E A+E+ +
Sbjct: 655 VEHWGCLADLFGRLGWIDEAERLVSFLPRTRASIAWTTLLSGCKVHGDVSTAERAAERAM 714

Query: 747 LLLPKNDAAHVLLS 760
            + P   + +VLLS
Sbjct: 715 AVDPSKSSPYVLLS 728



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 162/613 (26%), Positives = 268/613 (43%), Gaps = 48/613 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  IV      ++ L N+LI+MYS CG      R FD M  RN+VSW  I++A   
Sbjct: 98  GKKIHAQIVAGEVELELNLANSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSG 157

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G +   + ++ +M+  GF P+  +  SV   C  +     G  IH      R++ +  +
Sbjct: 158 HGHYREAVDLFYEMEKQGFKPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSI 217

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++LN YA+ G +  A  VF SI+S ++  W +MI  YA      +A  V   M   G+
Sbjct: 218 GNTLLNMYARCGSLDDARLVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GV 274

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV--ECSISIVNALIDMYIKSSGMDYA 300
             ++ TFI  L  C+        R+IH L++ S +  +  +++ N LI+ Y K   +  A
Sbjct: 275 APNEVTFITILGACAEARALKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDA 334

Query: 301 FKVFERM--ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
             VFE M  A+++V++W ++        +P +  +LFH+  L G   N +TF  +L  C 
Sbjct: 335 KTVFESMATAERNVVTWTSIIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACA 394

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF------------- 405
            L        L  L +  G+  +  V + LI MF +CG +E A ++F             
Sbjct: 395 DLGSTREARYLHGLIVSGGYDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTG 454

Query: 406 ---------------------DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
                                + +SYK++  W  +++ Y       + LK +  +   GV
Sbjct: 455 MLGAYIQQQEIRQAVSLFQQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGV 514

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ-LDNSF 503
             +  TF  ++  C R   ++    I   I++ G  S   + + L+  Y   G  L    
Sbjct: 515 APDEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKM 574

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
            F N AER D A+W A +      G   E++ +F  +V  G +PDE     +L SC+  G
Sbjct: 575 VFENLAER-DSAAWNAAIGVSGQHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSG 633

Query: 564 AYQRTKSIHPFVIKL---GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
             +R  +   F++     G    V     + D + + G I  A         +   I + 
Sbjct: 634 EIER--AWRWFLVMRGDHGMEPNVEHWGCLADLFGRLGWIDEAERLVSFLPRTRASIAWT 691

Query: 621 TLIMAYAHHGLVS 633
           TL+     HG VS
Sbjct: 692 TLLSGCKVHGDVS 704



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 217/451 (48%), Gaps = 10/451 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R+IH  + R+ ++    + N L+ MY K   +  A   F+ +A+K+V SW+ + G +S +
Sbjct: 1   RRIHSELARTGIDSETLLGNTLVQMYGKCGNLAEARAAFDGIAEKNVFSWSIIIGLYSRH 60

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
           +   +   LFH   +   RPN VTF   L  C     L+ G ++    +      E N+ 
Sbjct: 61  RLSREAIELFHAMDV---RPNCVTFINTLGACSSAEFLETGKKIHAQIVAGEVELELNLA 117

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           +SLI M+  CG++  A   FD ++ +N+ +WN +++ +  +    + +  F  + + G +
Sbjct: 118 NSLISMYSNCGSLVDAKRFFDGMNRRNVVSWNCIIAAFSGHGHYREAVDLFYEMEKQGFK 177

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +  +F  V   C   E+     +IH             I ++L+  Y   G LD++   
Sbjct: 178 PDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDARLV 237

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +     ++ SW +M++A       H+A  +F  +   G  P+E    TIL +CA   A 
Sbjct: 238 FDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEARAL 294

Query: 566 QRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTL 622
           ++ + IH  V+  G     ++ V + +I+ YAKCG +  A+  F+  +    +V+ + ++
Sbjct: 295 KQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWTSI 354

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I A    G   EA+ +F +M+L  +  ++ TF +V+SAC+  G   +   L   + S   
Sbjct: 355 IAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSGGY 414

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            + +  C G L++M  + G LEDA+ + E M
Sbjct: 415 DRDTVVCNG-LINMFGKCGMLEDARAIFERM 444



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 196/460 (42%), Gaps = 41/460 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D +      S    L+    G ++H          D+ + N L+ MY++CG      
Sbjct: 176 FKPDRVSFVSVFSACSILEDLSQGRRIHARFCDGRMKLDVSIGNTLLNMYARCGSLDDAR 235

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD +  RN+VSWT +++A  Q   F    +++  M   G  PNE    +++  C    
Sbjct: 236 LVFDSITSRNIVSWTSMIAAYAQFDRFHDAYEVFQKM---GVAPNEVTFITILGACAEAR 292

Query: 160 ASEFGYSIHCFALKIRI-EKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDD--VGCWN 215
           A +    IH   L   I EK    VG  ++N YAK G ++ A+ VF S+++ +  V  W 
Sbjct: 293 ALKQAREIHSLVLTSGILEKQQLTVGNGLINTYAKCGSLSDAKTVFESMATAERNVVTWT 352

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           ++I     CG+  EAL +   M  EGI  ++ TF   L  C+ +      R +HGLI+  
Sbjct: 353 SIIAACGLCGHPREALALFHRMELEGIPANEITFGTVLSACADLGSTREARYLHGLIVSG 412

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             +    + N LI+M+ K   ++ A  +FERM  +++++W  + G + + +   Q  SLF
Sbjct: 413 GYDRDTVVCNGLINMFGKCGMLEDARAIFERMRSRNLVTWTGMLGAYIQQQEIRQAVSLF 472

Query: 336 H----------------------------------KFILSGSRPNHVTFSILLRQCGKLL 361
                                              +  L G  P+ +TF  LL  C ++ 
Sbjct: 473 QQMERISYKDVMAWTTMVAAYAQAGYADEALKLYARMGLEGVAPDEITFVNLLHACSRMG 532

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
               G  ++   L  G      + + L+  +  CG    A  VF+N++ ++   WN  + 
Sbjct: 533 AKKEGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVFENLAERDSAAWNAAIG 592

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
               +    + L+ F  +   G+E +  TF  V+ +C  S
Sbjct: 593 VSGQHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHS 632



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 10/184 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I     L     + ++  G  +  HI++ G  +   L N L+  Y  CG +     VF
Sbjct: 517 DEITFVNLLHACSRMGAKKEGWTIRSHILERGLPSSRVLGNGLVCFYGACGTWLQAKMVF 576

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + +AER+  +W   +  + Q+G +D  L+++  M   G  P+E    +V+  C   G  E
Sbjct: 577 ENLAERDSAAWNAAIGVSGQHGFYDESLRLFERMVLEGMEPDEITFTNVLFSCSHSGEIE 636

Query: 163 FGYSIHCFALKIR----IEKN-PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG-CWNA 216
             +    + L +R    +E N    GC + + + +LG +  AER+   +        W  
Sbjct: 637 RAWR---WFLVMRGDHGMEPNVEHWGC-LADLFGRLGWIDEAERLVSFLPRTRASIAWTT 692

Query: 217 MIGG 220
           ++ G
Sbjct: 693 LLSG 696


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 173/616 (28%), Positives = 307/616 (49%), Gaps = 18/616 (2%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GIT 243
           S L    K G +  +  +F  ++  D   W  +I GY +    +EAL + S+M  + G+ 
Sbjct: 95  SELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQ 154

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D++    AL+ C L  +   G  +HG  ++S +  S+ + +ALIDMY+K   ++   +V
Sbjct: 155 RDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRV 214

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F++M  ++V+SW  +  G        +    F +  +S    +  TF+I L+       L
Sbjct: 215 FKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLL 274

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  +    +  GF +   V ++L  M+ +CG  +    +F+ +   ++ +W  L++ Y
Sbjct: 275 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTY 334

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                +   ++ F  + +S V  N  TF  V+  C      +   QIHG +++ G     
Sbjct: 335 VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDAL 394

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + +S++  Y   G L ++    +G  R D+ SW  +++     G+  EA      +   
Sbjct: 395 SVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRRE 454

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G KP+E+ L ++L+ C ++   ++ K +H  V+ +G + E  V SA+I  Y+KCG ++ A
Sbjct: 455 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEA 514

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F+     N++I +  +I  YA HG   EA+ +F+K+    L+P   TF+ V++ACSH
Sbjct: 515 SKIFN-GMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSH 573

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G+VD G   F  M ++Y + PS + YGC++D+L R G L +A+H+I  MP      V+ 
Sbjct: 574 AGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWS 633

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK----RKRQREG----NLLDHEG 775
           +LL  CR+HG+ + G W +E+LL L P +   H+ L+     + R +E      L+  +G
Sbjct: 634 TLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKG 693

Query: 776 V--------CNVNDGI 783
           V         NVND +
Sbjct: 694 VIKERGWSWVNVNDKL 709



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 266/595 (44%), Gaps = 29/595 (4%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMG 159
           +FD+M  R+ +SWT +++  +   +    L ++ +M    G   ++F +   +K C  +G
Sbjct: 112 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKAC-GLG 170

Query: 160 ASE-FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +  FG  +H F++K  +  + FV  ++++ Y K+G +    RVF  ++  +V  W A+I
Sbjct: 171 VNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAII 230

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G  H GY  EAL   S M    +  D +TF  AL+  +  +    G+ IH   I+   +
Sbjct: 231 AGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFD 290

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            S  ++N L  MY K    DY  ++FE+M   DV+SW TL   + +          F + 
Sbjct: 291 ESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRM 350

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S   PN  TF+ ++  C  L     G Q+    L  G +D  +V +S++ ++ + G +
Sbjct: 351 RKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLL 410

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  VF  ++ K+I +W+ +++ Y       +       +   G + N      V+  C
Sbjct: 411 KSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVC 470

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                 +   Q+H  ++  G      + S+LI  Y   G ++ + +  NG +  ++ SW 
Sbjct: 471 GSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWT 530

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AM++     G++ EA+ +F  +   G KPD      +L +C+           H  ++ L
Sbjct: 531 AMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS-----------HAGMVDL 579

Query: 579 GF------NTEVYVASA------VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
           GF        E  ++ +      +ID   + G +  A           D +V++TL+ + 
Sbjct: 580 GFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSC 639

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
             HG V      +   +L  L P+ A T +++ +  + KG   +   + K M S+
Sbjct: 640 RVHGDVDRGR--WTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSK 692



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 242/549 (44%), Gaps = 48/549 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G  +HG  VK G  N +F+ + LI MY K G    G RVF +M +RN+VSWT I++  +
Sbjct: 175 FGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLV 234

Query: 122 QNGEFDMGLKMYVD---MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             G ++M   +Y     +   G+  + FA+   +K          G +IH   +K   ++
Sbjct: 235 HAG-YNMEALLYFSEMWISKVGYDSHTFAIA--LKASADSSLLHHGKAIHTQTIKQGFDE 291

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + FV  ++   Y K G      R+F  +   DV  W  +I  Y   G    A+     M 
Sbjct: 292 SSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMR 351

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              ++ +KYTF   +  C+ +A    G QIHG ++R  +  ++S+ N+++ +Y KS  + 
Sbjct: 352 KSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLK 411

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  VF  +  KD+ISW+T+   +S+     +           G +PN    S +L  CG
Sbjct: 412 SASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCG 471

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +  L+ G Q+    L  G   E  V S+LI M+ +CG+VE A  +F+ +   NI +W  
Sbjct: 472 SMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTA 531

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +++GY  +    + +  F  I   G++ +  TF  V+  C            H  ++  G
Sbjct: 532 MINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS-----------HAGMVDLG 580

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F                F  + N ++ S   E      +G ++  L   G   EA  +  
Sbjct: 581 F--------------YYFMLMTNEYQISPSKEH-----YGCIIDLLCRAGRLSEAEHMIR 621

Query: 539 SLVEAGEKP---DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVASAVIDAY 594
           S+      P   D+ +  T+L SC   G   R +     +++L  N+   ++A A I  Y
Sbjct: 622 SM------PCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANI--Y 673

Query: 595 AKCGDIKGA 603
           A  G  K A
Sbjct: 674 AAKGRWKEA 682



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 4/251 (1%)

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VEAGE 545
           +S +K  V  GQL  S    +     D  SW  +++  V+   ++EA+ +F ++ V+ G 
Sbjct: 94  NSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGL 153

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           + D++++   L +C         + +H F +K G    V+V+SA+ID Y K G I+    
Sbjct: 154 QRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCR 213

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F +     +V+ +  +I    H G   EA+  F +M ++ +     TF   + A +   
Sbjct: 214 VFKK-MTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSS 272

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           L+  G  +      Q G   S      L  M ++ G  +    + E M   P    + +L
Sbjct: 273 LLHHGKAIHTQTIKQ-GFDESSFVINTLATMYNKCGKADYVMRLFEKMKM-PDVVSWTTL 330

Query: 726 LSGCRIHGNKE 736
           ++     G +E
Sbjct: 331 ITTYVQKGEEE 341


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 300/578 (51%), Gaps = 3/578 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+ + + G++  A  VF  +S  DV  WN ++GGYA  G   EALN+   ML+  
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  + YTF + L+ C+ V+D   G++IH  +IR   E  + + NALI MY+K   +  A 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F++M  +D ISWN +  G+ EN    +   LF         P+ +T + +   C  L 
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +  LG  +    +   F  + ++ +SLI M+   G +E A +VF  +  K++ +W  +++
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
               +      ++T+  +   G+  +  T   V+  C    +  +  ++H   IKTG  S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SLI  Y     +DN+ E        ++ SW +++  L     + EA+  F  + 
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK 493

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E+  KP+   L ++L++CA IGA  R K IH   ++ G   + ++ +A++D Y +CG   
Sbjct: 494 ES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKV 552

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F+      DV  +N L+  YA  G    A+E+FDKM    + P + TF+S++ AC
Sbjct: 553 PALNQFNS--QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCAC 610

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S  G+V +G   F  M ++Y + P+   Y C+VD+L R G L+DA   I+ MP +P   +
Sbjct: 611 SKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAI 670

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + +LL+ CRIH N ELGE A++++     K+   ++LL
Sbjct: 671 WGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILL 708



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 281/617 (45%), Gaps = 15/617 (2%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           + L N L++M+ + G       VF +M+ER++ SW ++V    + G FD  L +Y  M  
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
               PN +   SV+K C  +     G  IH   ++   E +  VG +++  Y K GD++ 
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  +F  +   D   WNAMI GY   G G E L + S M    +  D  T       C L
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + +  +GR +HG +++SE    IS+ N+LI MY     ++ A  VF RM  KDV+SW  +
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
                 +K P +    +    L G  P+ +T   +L  C  +  LDLG++L  +A+  G 
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
           +    V++SLI M+ +C  V+ A  VF N+S KN+ +W  L+ G   N    + L  F  
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           + ES ++ N  T   V+  C R        +IH   ++TG    G++ ++++  YV  G+
Sbjct: 492 MKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGR 550

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
              +    N +++ D+ +W  +++    QG    AV +F  ++E    PDE    ++L +
Sbjct: 551 KVPALNQFN-SQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCA 609

Query: 559 CAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           C+  G    T+ +  F I   K      +   + V+D   + G +  A           D
Sbjct: 610 CSKSGMV--TEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPD 667

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV---SVMSACSHKGLVDKGCL 672
             ++  L+ A   H  V E  EI  K        S   ++   ++ + C +   V K   
Sbjct: 668 AAIWGALLNACRIHRNV-ELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSK--- 723

Query: 673 LFKSMDSQYGMQPSPDC 689
             +S+  + G+   P C
Sbjct: 724 -VRSLMRERGLSADPGC 739



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 239/442 (54%), Gaps = 2/442 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +A+  + SML   I +++  +I  L+ C      D G +++ L+  S+    + + NAL+
Sbjct: 80  QAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALL 139

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            M+++   +  A+ VF +M+++DV SWN L GG+++     +  +L+H+ + +  RPN  
Sbjct: 140 SMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVY 199

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +L+ C  + D+  G ++    +  GF  + +V ++LI M+ +CG +  A  +FD +
Sbjct: 200 TFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKM 259

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +WN ++SGY  N    + L+ F  + E  V+ +  T   V   C   +N+++  
Sbjct: 260 PKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGR 319

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +HG ++K+ F     + +SLI+ Y + G+L+ +    +  E  D+ SW AM+++LV   
Sbjct: 320 GVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHK 379

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +AV  +  +   G  PDE  L ++L++CA IG       +H   IK G  + V V++
Sbjct: 380 LPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSN 439

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           ++ID Y+KC  +  A   F ++ +  +V+ + +LI+    +    EA+  F +MK  +++
Sbjct: 440 SLIDMYSKCKCVDNALEVF-RNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMK 497

Query: 649 PSQATFVSVMSACSHKGLVDKG 670
           P+  T +SV+SAC+  G + +G
Sbjct: 498 PNSVTLISVLSACARIGALMRG 519



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 228/469 (48%), Gaps = 16/469 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H+++ GF +D+ + N LI MY KCG       +FD+M +R+ +SW  ++S   +
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG    GL+++  M+     P+   + +V   C  +     G  +H + +K     +  +
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  Y+ LG +  AE VF  + S DV  W AMI         F+A+     M  EGI
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+ T ++ L  C+ +   D+G ++H + I++ +   + + N+LIDMY K   +D A +
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALE 456

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  ++ K+V+SW +L  G   N N    A LF + +    +PN VT   +L  C ++  
Sbjct: 457 VFRNISGKNVVSWTSLILGLRIN-NRSFEALLFFRQMKESMKPNSVTLISVLSACARIGA 515

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++   AL  G   +  + ++++ M+ RCG    A + F N   K++T WN LL+G
Sbjct: 516 LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTG 574

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y         ++ F  + E  +  +  TF  ++  C +S      G +   +        
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKS------GMVTEGLEYFNIMKN 628

Query: 483 GYICSSLIKSYV-------NFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
            Y  +  +K Y          GQLD++++F  +   R D A WGA+++A
Sbjct: 629 KYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNA 677



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 179/387 (46%), Gaps = 14/387 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I +    S  E L +  LG  VHG++VK  F  DI + N+LI MYS  G       VF
Sbjct: 298 DLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVF 357

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  +++VSWT ++++ + +      ++ Y  M+  G +P+E  + SV+  C  +G  +
Sbjct: 358 SRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLD 417

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H  A+K  +  +  V  S+++ Y+K   V  A  VF +IS  +V  W ++I G  
Sbjct: 418 LGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLR 477

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                FEAL     M  E +  +  T I+ L  C+ +     G++IH   +R+ V     
Sbjct: 478 INNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF 536

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++DMY++      A   F     KDV +WN L  G+++         LF K +   
Sbjct: 537 LPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCG 396
             P+ +TF  LL  C K      G+  + L       ++ N+T +L +  C      R G
Sbjct: 596 IHPDEITFISLLCACSK-----SGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650

Query: 397 AVEMAHSVFDNVSYK-NITTWNELLSG 422
            ++ A+    ++  + +   W  LL+ 
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNA 677



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + L   LS    + + + G ++H H ++ G   D FL N ++ MY +CG     L
Sbjct: 496 MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPAL 555

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F+   ++++ +W ++++   Q G+  + ++++  M      P+E    S++  C   G
Sbjct: 556 NQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSG 614


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 183/626 (29%), Positives = 325/626 (51%), Gaps = 10/626 (1%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H  A+K+    + +   ++LN Y K  ++ +A+ +F  +   D   WN MI G+ +CG  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             + +V+  M   G  +D+YTF + L+G +    F +G+Q+H +II+     ++   +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   ++ A+  F  ++  + +SWN +  G+++  +      L       G + + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T++ LL         +L  QL    +  G      + ++LI  + +CG+++ A  +FD+
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 408 -VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
               +++ TWN LL+ Y     +    K   ++ E G E +  ++  ++ + C +EN   
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSII-SACFNENISN 319

Query: 467 VGQ-IHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            G+ +HG +IK GF     I ++LI  Y+  ++G +  +       E  D  SW ++++ 
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L   G + +AV  F  +  A    D Y    +L SC+ +  +Q  + IH   +K G  + 
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            +V+S++I  Y+KCG I+ AR +F+++ + N  I +N L+  YA HG  + A+++F  M+
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEA-SKNSSITWNALMFGYAQHGQCNVALDLFFLME 498

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              ++    TFV+V++ACSH GLV++GC   + M+S YG+ P  + Y C VD+  R+G L
Sbjct: 499 XKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRK 763
           E+AK +IE MPF+P  TV+++ L  CR  GN EL    +  LL + P+    +VLLS   
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMY 618

Query: 764 RQREGNLLDHEGVCNVNDGIKTVDLK 789
               GNL+  +    V   +K   +K
Sbjct: 619 ----GNLMRWDEKAKVKRLMKERGVK 640



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 260/566 (45%), Gaps = 10/566 (1%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H   VKLG   D++  NN++  Y KC        +FDEM  R+ VSW  +++  I  G  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
           +    +   M++ GF  + +  GS++K     G    G  +H   +K+   +N + G ++
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L+ YAK   +  A   F SIS  +   WNAMI GYA  G    A  ++  M  EG  +D 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 247 YTFINALQGCSLVADFD---IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            T+   L    L+ D D   +  Q+HG II+  +E   ++ NALI  Y K   +D A ++
Sbjct: 201 GTYAPLL---PLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 304 FERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           F+  A  +D+++WN+L   +           L       G  P+  +++ ++  C     
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC--GAVEMAHSVFDNVSYKNITTWNELL 420
            + G  L  L +  GF     ++++LI M+ +   G+++ A  +F+++ +K+  +WN +L
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G        D +K+F ++  + ++++  +F  V+ +C      Q+  QIH   +K G  
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLE 437

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  ++ SSLI  Y   G ++++      A +    +W A+M      G  + A+ +F  +
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLM 497

Query: 541 VEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
                K D      +L +C+ IG   Q  K +       G    +   +  +D Y + G 
Sbjct: 498 EXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGR 557

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ A+   ++     D  V+ T + A
Sbjct: 558 LEEAKALIEEMPFKPDTTVWKTFLGA 583



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 189/400 (47%), Gaps = 3/400 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  I+K+G+  +++  + L+ MY+KC         F  +++ N VSW  +++   
Sbjct: 117 LGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYA 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+ +    +   M+  G   ++     ++ +            +H   +K  +E    
Sbjct: 177 QAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  +++  Y+K G +  A+R+F S +   D+  WN+++  Y        A  ++  M   
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH 296

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS--GMD 298
           G   D Y++ + +  C      + GR +HGL+I+   E S+ I NALI MY+KS    M 
Sbjct: 297 GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMK 356

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +FE +  KD +SWN++  G S+  +       F     +    +H +FS +LR C 
Sbjct: 357 EALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS 416

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L    LG Q+  LAL  G    E V+SSLI+M+ +CG +E A   F+  S  +  TWN 
Sbjct: 417 DLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNA 476

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           L+ GY  +      L  F  +    V+++  TF  V+  C
Sbjct: 477 LMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTAC 516



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 19/313 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY--FGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  +HG ++K GF   + + N LI+MY K  Y      L +F+ +  ++ VSW  I++  
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G  +  +K ++ M++     + ++  +V++ C  +   + G  IH  ALK  +E N 
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNE 440

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y+K G +  A R F   S +    WNA++ GYA  G    AL++   M  +
Sbjct: 441 FVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXK 500

Query: 241 GITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSE-VECSISIVNALIDMYI 292
            + MD  TF+  L  CS +   + G          +G+  R E   C+       +D+Y 
Sbjct: 501 KVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACA-------VDLYG 553

Query: 293 KSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
           +S  ++ A  + E M  K D   W T  G      N  + A      +L      H T+ 
Sbjct: 554 RSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNI-ELACQVAGHLLEMEPEEHCTYV 612

Query: 352 ILLRQCGKLLDLD 364
           +L    G L+  D
Sbjct: 613 LLSNMYGNLMRWD 625


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 197/744 (26%), Positives = 364/744 (48%), Gaps = 26/744 (3%)

Query: 25  IHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK--LGFTNDIFLQ 82
           +    G+++  SD FL      L   L  S   K   +G ++H H+V       +D  L 
Sbjct: 66  VQEFAGDDESSSDVFLLVREA-LGLLLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLC 123

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNG 140
             +I MY+ CG        FD +  +NL  W  ++S+  +N  +   L+M++ M  KT+ 
Sbjct: 124 TRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTH- 182

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
            +P+ F    V+K C  +     G ++H   +K  + ++ FVG ++++FY   G V+ A 
Sbjct: 183 LLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDAL 242

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLV 259
           ++F  +   ++  WN+MI  ++  G              +G  M D  T +  L  C+  
Sbjct: 243 KLFDIMPERNLVSWNSMIRVFSDNGD-------------DGAFMPDVATVVTVLPVCARE 289

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            +  +G+ +HG  ++  ++  + + NAL+DMY K   +  +  +F+   +K+V+SWNT+ 
Sbjct: 290 REIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMV 349

Query: 320 GGFSENKNPGQTASLFHKFILSGS---RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           GGFS   +   T  L  + +L+GS   + + VT    +  C     L    +L C +L  
Sbjct: 350 GGFSAEGDIHGTFDLLRQ-MLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQ 408

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
            F+ +E + ++ +  + +CG++  A  VF  +  K + +WN L+ GY  +      L   
Sbjct: 409 EFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAH 468

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +  SG+  +  T   ++  C + ++ ++  ++HG II+       ++  S++  Y++ 
Sbjct: 469 LQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 528

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+L       +  E   + SW  +++  +  G    A+ +F  +V  G +P    + T+ 
Sbjct: 529 GELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVF 588

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +C+ + + +  +  H + +K       ++A ++ID YAK G I  +   F+        
Sbjct: 589 GACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFN-GLKEKSA 647

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
             +N +IM Y  HG   EA+++F++M+     P   TF+ V++AC+H GL+ +G      
Sbjct: 648 ASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQ 707

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M S +G++P+   Y C++DML R G L++A  V   M  +P   ++ SLLS CRIH N E
Sbjct: 708 MKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLE 767

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           +GE  + KL +L P+    +VLLS
Sbjct: 768 MGEKVAAKLFVLEPEKPENYVLLS 791



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/522 (25%), Positives = 238/522 (45%), Gaps = 19/522 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG  VKL    ++ + N L+ MYSK G       +F     +N+VSW  +V    
Sbjct: 294 VGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFS 353

Query: 122 QNGE----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
             G+    FD+  +M     +     +E  + + + VC           +HC++LK    
Sbjct: 354 AEGDIHGTFDLLRQMLAG--SEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFV 411

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +  + +  YAK G ++ A+RVF+ I S  +  WNA+IGGYA       +L+    M
Sbjct: 412 YDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQM 471

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  D +T  + L  CS +    +G+++HG IIR+ +E  + +  +++ +YI    +
Sbjct: 472 KNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 531

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
                +F+ M D  ++SWNT+  G  +N  P +   LF + +L G +P  ++   +   C
Sbjct: 532 CTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGAC 591

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L LG +    AL     D   +  S+I M+ + GA+  +  VF+ +  K+  +WN
Sbjct: 592 SLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWN 651

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGA 473
            ++ GY  +    + +K F  +  +G   +  TF  V+  C  S    E  + + Q+  +
Sbjct: 652 AMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSS 711

Query: 474 I-IKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMS-ALVHQGHN 530
             +K       Y C  +I      GQLDN+    +  +E  D+  W +++S   +HQ   
Sbjct: 712 FGLKPNLKH--YAC--VIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQNLE 767

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
                     V   EKP+ Y+L  + N  A +G +   + + 
Sbjct: 768 MGEKVAAKLFVLEPEKPENYVL--LSNLYAGLGKWDDVRQVR 807


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 212/720 (29%), Positives = 363/720 (50%), Gaps = 18/720 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS +   +S   G   HG  +K     D+ L N L+ MY+KCG F     VF  M  R+ 
Sbjct: 171 LSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDT 230

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHC 169
            SW  +VS ++ NG  ++    + +M  + F  +E ++  V+  C  +     FG S+H 
Sbjct: 231 TSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHS 290

Query: 170 FALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             +K+  E     V  S++ FY +LG   AAE VF S S+ ++  WNAMI G        
Sbjct: 291 SVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVN 350

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS---EVECSISIVN 285
           EA+ +   M  +    D  T +  +  C        G+++HG II+      ECS+   N
Sbjct: 351 EAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVG--N 407

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSR 344
           +L+D+Y+K +    A  +F  M  +D+ISWNT+  G+S N + G+ A    K +LS G  
Sbjct: 408 SLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLS 467

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
               T   ++  C    DL+ G  +    L  GFL   +  +SLI+M+  CG    A S+
Sbjct: 468 CTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSL 527

Query: 405 FDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN--GCTFFYVVETCCRS 461
            ++++   +I +WN  + G   N    D L+ F     S + +N    T   V+  C   
Sbjct: 528 LESITPMSDIISWNTAIVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSVCGNL 586

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAM 520
           + Q +   IH   +K        + ++L+  Y  FG  +++   FS+   R ++ SW  M
Sbjct: 587 KLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGR-NLCSWNCM 645

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S          A+  F+  +E  E P+E  +  I+ +C  +G  ++ K+IH  V++ G 
Sbjct: 646 ISGFAQNNEGLRALQ-FYKKMEYFE-PNEISIVGIICACTQLGDLRQGKNIHGHVVRFGL 703

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            T V+++++++D Y+KCG +  +   F+ S     +  +N++I A+  HGL  +++EIF 
Sbjct: 704 QTNVFISASLVDMYSKCGRLDISIRVFESS-AEKSIACWNSMISAFGFHGLGLKSIEIFW 762

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM  + ++ +++TF++++SACSH GL D+G   +  M   +G+ P+P+ + C+VDML R 
Sbjct: 763 KMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRA 822

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L++A   +E +P + +  V+ +LLS C      ++ E  ++ LL L P+N   +V +S
Sbjct: 823 GRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMS 882



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 166/682 (24%), Positives = 308/682 (45%), Gaps = 28/682 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K     D  ++ ++I  YS+       L+VFDE A  +L+ W   +SA   N  
Sbjct: 85  LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 126 FDMGLKMYVDMKTNGFMPNEFAV-GSVMKVCVSMGAS-----EFGYSIHCFALKIRIEKN 179
           +   + ++       +M +   V  S   V +  GAS     E G + H  ALK R++ +
Sbjct: 145 YGDAVVLF------RWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTD 198

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +  ++++ YAK GD  ++E VF  +   D   WN+M+ G    G    +      M+ 
Sbjct: 199 LSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR 258

Query: 240 EGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGM 297
                D+ +    L  CS + D F  G  +H  +I+   E + S V N+LI  Y +    
Sbjct: 259 SSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFP 318

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A +VF   ++K++++WN +  G  EN    +   +F + + S ++P+  T   ++  C
Sbjct: 319 EAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISAC 377

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           G    L  G ++    +  G + EE +V +SL+ ++ +C     A  +F  +  +++ +W
Sbjct: 378 GDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISW 437

Query: 417 NELLSGYCFNCCDADVLKT-FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           N ++SGY  N    +  K  F  +   G+     T   V+ +C   ++      +H  I+
Sbjct: 438 NTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL 497

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAV 534
           K GF +     +SLI  Y+  G    +F        + D+ SW   +   V  G   +A+
Sbjct: 498 KYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDAL 557

Query: 535 TIF---HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
             F   HS +     PD   L ++L+ C  +      KSIH   +K      + V +A++
Sbjct: 558 EAFQFMHSTLTL--NPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALL 615

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             Y + GD + A + F  S    ++  +N +I  +A +     A++ + KM+    +P++
Sbjct: 616 TMYFRFGDTESAELIF-SSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEY--FEPNE 672

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            + V ++ AC+  G + +G  +   +  ++G+Q +      LVDM S+ G L+ +  V E
Sbjct: 673 ISIVGIICACTQLGDLRQGKNIHGHV-VRFGLQTNVFISASLVDMYSKCGRLDISIRVFE 731

Query: 712 IMPFQPSPTVYRSLLSGCRIHG 733
               + S   + S++S    HG
Sbjct: 732 -SSAEKSIACWNSMISAFGFHG 752



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 234/525 (44%), Gaps = 18/525 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HC 224
           ++HC ALK     +P V  SV+  Y+++ DV +A +VF   ++ D+  WNA I     +C
Sbjct: 84  ALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
            YG +A+ +   M+      D  + +  L G S     + G   HG+ ++  ++  +S+ 
Sbjct: 144 RYG-DAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLW 202

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N L+DMY K      +  VF+RM  +D  SWN++  G   N     +A  F + + S  +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 345 PNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAH 402
            + V+ S +L  C  L DL   G  +    +  G+ D   +V +SLI  +   G  E A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE--SGVEVNGCTFFYVVETCCR 460
            VF + S KN+ TWN ++ G   N     V +  C   E  S  + +  T   ++  C  
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVEN---DRVNEAMCMFQEMRSKNQPDVATLVTIISACGD 379

Query: 461 SENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                   ++HG IIK G  +  C  + +SL+  Y+       +          D+ SW 
Sbjct: 380 RGLLPEGKEVHGYIIKKGHIYEECS-VGNSLLDLYMKCNDPSTARILFRTMPMRDLISWN 438

Query: 519 AMMSALVHQGH-NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            M+S          EA  +F  L+  G       +  ++ SC         KS+H F++K
Sbjct: 439 TMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK 498

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            GF T V  A+++I  Y  CGD   A    +     +D+I +NT I+    +GL  +A+E
Sbjct: 499 YGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALE 558

Query: 638 IFDKM-KLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSM 677
            F  M     L P   T VSV+S C +  L   G    C+  K +
Sbjct: 559 AFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRL 603



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 12/292 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D I L   LS+  NLK + LG  +H   +K     ++ ++N L+ MY + G      
Sbjct: 569 LNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAE 628

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  RNL SW  ++S   QN E    L+ Y  M+   F PNE ++  ++  C  +G
Sbjct: 629 LIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKMEY--FEPNEISIVGIICACTQLG 686

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G +IH   ++  ++ N F+  S+++ Y+K G +  + RVF S +   + CWN+MI 
Sbjct: 687 DLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMIS 746

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR----- 274
            +   G G +++ +   M   G+   + TFI  L  CS     D G + + L+I      
Sbjct: 747 AFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGII 806

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSEN 325
              E  + +V    DM  ++  +  A K  E +  K     W  L    S+ 
Sbjct: 807 PTPEHHVCVV----DMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKK 854



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 1/202 (0%)

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E    V  +H A +K+       + +S+I +Y     + ++ +  + A   D+  W A +
Sbjct: 77  EEADGVAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAI 136

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           SAL       +AV +F  +V+     D   +  +L+  +   + +   + H   +K   +
Sbjct: 137 SALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLD 196

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           T++ + + ++D YAKCGD   + + F Q     D   +N+++     +GL   +   F +
Sbjct: 197 TDLSLWNTLMDMYAKCGDFYSSEVVF-QRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 642 MKLANLQPSQATFVSVMSACSH 663
           M  ++ Q  + +   V+SACSH
Sbjct: 256 MVRSSFQADEVSLSCVLSACSH 277


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 189/687 (27%), Positives = 345/687 (50%), Gaps = 30/687 (4%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD    R+++SW+ +++A  + G F     ++  M   G  PN F++ S++KV  S G
Sbjct: 76  QLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTG 135

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAM 217
                  +H ++++     +  +  + +  Y++ G +  A+RVF   S+ + D+  WN++
Sbjct: 136 EIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSI 195

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMD-KYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           I  Y   G   E L +   M+  G+    + T+ + +  C    +   G  +HG II++ 
Sbjct: 196 IAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAG 255

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLF 335
           +E + ++ N+L+  Y K   + +A ++FER++ KDV+SWN +    +E +  G+ A  LF
Sbjct: 256 LEAT-NLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAA-NEQRGEGENALGLF 313

Query: 336 HKF--ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
            +   +    +PN VTF  LL     L  L  G ++           + ++T+SLI  + 
Sbjct: 314 RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYS 373

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +C  V  A  +F+ +  ++I +WN +L+GY  N         F  +  SG+E +  +   
Sbjct: 374 KCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTI 433

Query: 454 VVETCCRSENQQMV----GQIHGAIIK--TGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
           +     R  +  +      +IHG I++  T       + ++++K Y  F ++ ++ +   
Sbjct: 434 IFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFK 493

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           G +  D  SW AMM          + + IF  +++ G   D   L  +L SC  + + Q 
Sbjct: 494 GMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQL 553

Query: 568 TKSIHPFVIKLGFNTE--------VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
            K  H  V KL FN +        + + +A+I  Y+KCG IK A   F +     DV  +
Sbjct: 554 GKQFHAVVAKL-FNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLK-MERKDVFSW 611

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             +I   AHHGL  EA+++F++MK   ++P+Q TF++++ AC+H GLV +G   F SM +
Sbjct: 612 TAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYN 671

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE--IMPFQPSP----TVYRSLLSGCRIHG 733
            YG+ PS + Y C++D+  R+G  + AK ++E  I  F+P       +++ LL  C    
Sbjct: 672 DYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASK 731

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
             +LG  A+ K+L L P+++A ++LL+
Sbjct: 732 QLDLGVEAATKILELEPEDEATYILLA 758



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/682 (24%), Positives = 317/682 (46%), Gaps = 42/682 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ +   LA  L +S +     L  Q+HG  ++ GF  D  ++   I MYS+CG      
Sbjct: 117 LQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQ 176

Query: 100 RVFDE--MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCV 156
           RVFDE  +   +++ W  I++A I +G +   L+++  M + G + P E    SV+  C 
Sbjct: 177 RVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACG 236

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S G  ++G  +H   +K  +E       S++ FY K G++  A ++F  IS  DV  WNA
Sbjct: 237 SSGEEKYGAMVHGRIIKAGLEATNLWN-SLVTFYGKCGNLQHASQLFERISRKDVVSWNA 295

Query: 217 MIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           MI      G G  AL +   ML     +  ++ TF++ L   S ++    GR+IH  I R
Sbjct: 296 MIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFR 355

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +E   SI N+LI  Y K   +  A ++FER+  +D+ISWN++  G+ +N+  G+   +
Sbjct: 356 LSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDI 415

Query: 335 FHKFILSGSRPNHVTFSILL----RQCGKLLDLDLGLQLQCLALHCGFLDEE-------- 382
           F + +LSG  P+  + +I+     R    L+    G ++       G++           
Sbjct: 416 FKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIH------GYILRRITPGGVSL 469

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           +V+++++ M+ +   +  A  +F  +  ++  +WN ++ GY  N    DVL  F +I + 
Sbjct: 470 SVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQ 529

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCGY------ICSSLIKSYVN 495
           G  ++  +   ++ +C R  + Q+  Q H  + K      C +      I ++LI  Y  
Sbjct: 530 GFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSK 589

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G + ++ +     ER D+ SW AM++   H G   EA+ +F  +   G KP++     +
Sbjct: 590 CGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLAL 649

Query: 556 LNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR------MAFD 608
           L +CA  G  Q  +          G +  +   + +ID + + G    A+      +   
Sbjct: 650 LMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLF 709

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSVMSACSHKGLV 667
           + ++ + + ++  L+ A   H      + +    K+  L+P  +AT++ + +  +  GL 
Sbjct: 710 KPYHDDILNLWKVLLGAC--HASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLW 767

Query: 668 DKGCLLFKSMDSQYGMQPSPDC 689
           +    + K+M  + G++    C
Sbjct: 768 EDAIKVRKAMRDK-GLRKEVGC 788



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 183/369 (49%), Gaps = 7/369 (1%)

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++F+   ++DVISW+ L   +S   N  Q   LF K +  G +PN  + + LL+    
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWN 417
             ++ L  QL   ++  GF  +  + ++ I M+ RCG +E A  VFD  S    +I  WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
            +++ Y F+ C  +VL+ FC +   G V     T+  VV  C  S  ++    +HG IIK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G  +   + +SL+  Y   G L ++ +      R D+ SW AM++A   +G    A+ +
Sbjct: 254 AGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312

Query: 537 FHSL--VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           F  +  VE   +P+     ++L++ + + A +  + IH  + +L    +  + +++I  Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +KC ++  AR  F++     D+I +N+++  Y  +       +IF +M L+ ++P   + 
Sbjct: 373 SKCREVGKAREIFERLL-LRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSL 431

Query: 655 VSVMSACSH 663
             + +A S 
Sbjct: 432 TIIFNAASR 440



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 124/560 (22%), Positives = 242/560 (43%), Gaps = 36/560 (6%)

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+++F +  + DV  W+A+I  Y+ CG   +A  +   M+ EG+  + ++  + L+    
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWN 316
             +  + RQ+HG  IR+       I  A I MY +   ++ A +VF+   +   D++ WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 317 TLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           ++   +  +    +   LF K +  G   P  +T++ ++  CG   +   G  +    + 
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G L+  N+ +SL+  + +CG ++ A  +F+ +S K++ +WN +++         + L  
Sbjct: 254 AG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGL 312

Query: 436 FCNIW--ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           F  +   E  V+ N  TF  ++         +   +IH  I +        I +SLI  Y
Sbjct: 313 FRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFY 372

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
               ++  + E        D+ SW +M++             IF  ++ +G +PD + L 
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432

Query: 554 TILNSCAAIGA----YQRTKSIHPFVIK--LGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
            I N+ +   +    ++R K IH ++++        + V++A++  YAK   I  A   F
Sbjct: 433 IIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIF 492

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF----------DKMKLANLQPSQATFVSV 657
            +   + D   +N ++  Y+ +    + + IF          D + L+ L  S    VS+
Sbjct: 493 -KGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSL 551

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY----GCLVDMLSRNGYLEDAKHVIEIM 713
                   +V K   LF   D      P  D        L+ M S+ G ++DA  V   M
Sbjct: 552 QLGKQFHAVVAK---LFNGQDC-----PHQDSLLSINNALISMYSKCGSIKDAAQVFLKM 603

Query: 714 PFQPSPTVYRSLLSGCRIHG 733
             +     + ++++GC  HG
Sbjct: 604 E-RKDVFSWTAMITGCAHHG 622



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 126/252 (50%), Gaps = 6/252 (2%)

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            N+Q+  Q HG   +  F      CS  + S     +L  + +  +     D+ SW A++
Sbjct: 36  RNKQLEFQNHGFSSQFIFRCSA--CSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALI 93

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A    G+  +A  +F  ++  G +P+ + L ++L    + G     + +H + I+ GF 
Sbjct: 94  AAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFG 153

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            +  + +A I  Y++CG ++ A+  FD+ S  + D++++N++I AY  HG   E + +F 
Sbjct: 154 LDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFC 213

Query: 641 KM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           KM  +  + P++ T+ SV++AC   G    G ++   +  + G++ + + +  LV    +
Sbjct: 214 KMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRI-IKAGLEAT-NLWNSLVTFYGK 271

Query: 700 NGYLEDAKHVIE 711
            G L+ A  + E
Sbjct: 272 CGNLQHASQLFE 283



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 28/261 (10%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND-------IFLQNNLIAMYSKCGYF 95
           D + L+  L+    L S  LG Q H  + KL    D       + + N LI+MYSKCG  
Sbjct: 534 DHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSI 593

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VF +M  +++ SWT +++    +G     L+++  MKT+G  PN+    +++  C
Sbjct: 594 KDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMAC 653

Query: 156 -----VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER-------VF 203
                V  G+  F    + + L   IE      C +++ + + G    A+        +F
Sbjct: 654 AHGGLVQEGSYYFDSMYNDYGLSPSIEH---YAC-MIDLFGRSGQFDRAKSLVEFGITLF 709

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI---NALQGCSLVA 260
                D +  W  ++G   H     +     ++ + E    D+ T+I   N      L  
Sbjct: 710 KPYHDDILNLWKVLLGA-CHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWE 768

Query: 261 D-FDIGRQIHGLIIRSEVECS 280
           D   + + +    +R EV CS
Sbjct: 769 DAIKVRKAMRDKGLRKEVGCS 789


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 181/699 (25%), Positives = 348/699 (49%), Gaps = 5/699 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           TQ+H H+   G          LI  Y++ G F    RVFD   + +   W +++   +  
Sbjct: 18  TQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWG 77

Query: 124 GEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           G F+  + +Y +M   +    + F   SV+K C   G    G  +H   +K   E +  V
Sbjct: 78  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+L  Y ++  +  A + F ++   DV  W++++  +   G   E L++ S M+ E +
Sbjct: 138 ETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAV 197

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T ++  + CS +    +GR +HG ++R E+E + S+ N+LI MY K   +  A +
Sbjct: 198 EPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAER 257

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FE +  +    W  +   ++++    +  ++F K       PN VT   +L  C +L  
Sbjct: 258 LFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGR 317

Query: 363 LDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +  G  +    +      E + +  +L+ ++   G +   H VF+ +  K I +WN L+S
Sbjct: 318 VKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS 377

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  N    + L  F  +   G+  +  +    +  C      Q+  QIHG IIKTG + 
Sbjct: 378 IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NF 436

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ ++LI  Y   G + ++ +     +   + +W +M+      G++ EA+T+F  + 
Sbjct: 437 NDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMY 496

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               K D+    +++ +C+ +G  ++ K +H  +I  G   + Y+ +A+ D Y+KCG+++
Sbjct: 497 MNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQ 556

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   FD+  +   ++ ++ +I  Y  HG ++  + +F++M  + ++P+  TF+ ++SAC
Sbjct: 557 MAHGVFDR-MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 615

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH G V++G L F SM S++G++P  D + C+VD+LSR G L  A  +I  +PF  + ++
Sbjct: 616 SHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSI 674

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + +LL+GCRIH   ++ +   + LL +   +   + LLS
Sbjct: 675 WGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLS 713



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 270/543 (49%), Gaps = 2/543 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG ++K GF +D  ++ +L+ MY +        + FD M  R++V+W+ IV   +
Sbjct: 118 VGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFV 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG+   GL M+  M +    P+   + SV + C  +G+   G S+H + ++  IE N  
Sbjct: 178 QNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNAS 237

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S++  Y KLGD+ +AER+F ++       W  MI  Y   G   EALNV + M    
Sbjct: 238 LNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFK 297

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYA 300
           +  ++ T +  L  C+ +     GR +HG +IR  ++  +  +  AL+++Y  +  +   
Sbjct: 298 MEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDC 357

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVFE + +K ++SWNTL   F+ N  P +   LF +    G  P+  + +  L  CG +
Sbjct: 358 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 417

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
               LG Q+    +  G  + + V ++LI M+ +CG V  A+ +F+ +  K++ TWN ++
Sbjct: 418 SFSQLGAQIHGYIIKTGNFN-DFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMI 476

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G+  N    + +  F  ++ + V+++  TF  V++ C      +    +H  +I  G  
Sbjct: 477 CGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLR 536

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              Y+ ++L   Y   G+L  +    +      + SW  M++     G  +  +++F+ +
Sbjct: 537 KDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQM 596

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           + +G KP++     IL++C+  GA +  K     + + G   +    + ++D  ++ GD+
Sbjct: 597 LGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDL 656

Query: 601 KGA 603
            GA
Sbjct: 657 NGA 659



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 217/412 (52%), Gaps = 5/412 (1%)

Query: 51  LSLSE---NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           LS++E    L S  LG  VHG++V+    ++  L N+LI MY K G      R+F+ +  
Sbjct: 205 LSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPC 264

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           R    WT ++S   Q+G F   L ++  M+     PN+  +  V+  C  +G  + G S+
Sbjct: 265 RMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSV 324

Query: 168 HCFALKIRIEKN-PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           H F ++  ++    F+G +++  YA  G++    +VF +I    +  WN +I  +   G 
Sbjct: 325 HGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQ 384

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL +   M  +G+  D Y+  ++L  C  ++   +G QIHG II++    +  + NA
Sbjct: 385 PEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNA 443

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY K   +  A K+FE++ +K +++WN++  GFS+N    +  +LF +  ++  + +
Sbjct: 444 LIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMD 503

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +TF  +++ C  L  L+ G  +    +  G   +  + ++L  M+ +CG ++MAH VFD
Sbjct: 504 KLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFD 563

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +S ++I +W+ +++GY  +      +  F  +  SG++ N  TF +++  C
Sbjct: 564 RMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC 615



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 129/261 (49%), Gaps = 2/261 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HG+I+K G  ND F+QN LI MY+KCG+     ++F+++ E++LV+W  ++    
Sbjct: 422 LGAQIHGYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFS 480

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG     + ++  M  N    ++    SV++ C  +G  E G  +H   +   + K+ +
Sbjct: 481 QNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSY 540

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++ + Y+K G++  A  VF  +S   +  W+ MI GY   G     +++ + ML  G
Sbjct: 541 LDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSG 600

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +  TF++ L  CS     + G+     +    VE        ++D+  ++  ++ A+
Sbjct: 601 IKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAY 660

Query: 302 KVFERMA-DKDVISWNTLFGG 321
           ++   +    +   W  L  G
Sbjct: 661 QIITSLPFPANSSIWGALLNG 681


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 190/660 (28%), Positives = 337/660 (51%), Gaps = 19/660 (2%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-VGCSVL 187
            L  +VD+   G +    AV  V+KVC  +     G  +HC  +K   ++    VG +++
Sbjct: 84  ALDHFVDVHRCGRVQGA-AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALV 142

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           + Y K G V     VF  +   +V  W +++ GY       + + +   M  EG+  + +
Sbjct: 143 DMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPF 202

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF + L   +     D+GR++H   ++     ++ + N+LI+MY K   ++ A  VF +M
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQM 262

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             +D++SWNTL  G   N++  +   LFH    S ++ +  T+S +++ C  L  L L  
Sbjct: 263 ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALAR 322

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFN 426
           QL    L  GF  + NV ++++  + +CG ++ A ++F  +   +N+ +W  ++ G C  
Sbjct: 323 QLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGG-CIQ 381

Query: 427 CCDADVLKT-FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
             D  +    F  + E  V+ N  T+  V+     +    ++ QIH  IIKT +     +
Sbjct: 382 NADIPLAAALFSRMREDNVKPNEFTYSTVLT----ASIPILLPQIHAQIIKTNYQHAPSV 437

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+ SY   G  + +       +  D+ +W AM+S     G    A  +F  +   G 
Sbjct: 438 GTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGM 497

Query: 546 KPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           KP+E+ + + +++CA+  A   + +  H   IK  +   + V SA++  YA+ G I  AR
Sbjct: 498 KPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSAR 557

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           + F++  +  D++ +N++I  YA HG   EA++ F +M+   ++   ATF++V+  C+H 
Sbjct: 558 IVFERQTD-RDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHA 616

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV +G   F SM   + + P+ + Y C+VD+ SR G L++  ++IE MPF     V+R+
Sbjct: 617 GLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRT 676

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEGV 776
           LL  CR+H N ELG+ A++KLLLL P + A +VLLS         ++R     L+D + V
Sbjct: 677 LLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKV 736



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/579 (24%), Positives = 259/579 (44%), Gaps = 12/579 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +  RV G Q+H   VK GF   ++ +   L+ MY KCG    G  VF+ M +RN+V+WT 
Sbjct: 112 IPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTS 171

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +++  +Q       + ++  M+  G  PN F   SV+    S GA + G  +H  ++K  
Sbjct: 172 LLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFG 231

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
                FV  S++N Y+K G V  A+ VF  + + D+  WN ++ G     +  EAL +  
Sbjct: 232 CRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFH 291

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                   + + T+   ++ C+ +    + RQ+H  +++       +++ A++D Y K  
Sbjct: 292 DSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCG 351

Query: 296 GMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            +D AF +F  M   ++V+SW  + GG  +N +    A+LF +      +PN  T+S +L
Sbjct: 352 ELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVL 411

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +L   +  Q+    +   +    +V ++L+  + + G  E A S+F  + +K++ 
Sbjct: 412 TASIPILLPQIHAQI----IKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVV 467

Query: 415 TWNELLSGYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHG 472
            W+ +LS Y     CD      F  +   G++ N  T    ++ C         G Q H 
Sbjct: 468 AWSAMLSCYSQAGDCDG-ATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHA 526

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNH 531
             IK  +     + S+L+  Y   G +D++   F    +R D+ SW +M+S     G++ 
Sbjct: 527 ISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDR-DLVSWNSMISGYAQHGYSK 585

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAV 590
           EA+  F  +   G + D      ++  C   G  +  +      V+    +  +   S +
Sbjct: 586 EALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCM 645

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +D Y++ G +       +        +V+ TL+ A   H
Sbjct: 646 VDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVH 684


>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
 gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
          Length = 666

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 178/661 (26%), Positives = 317/661 (47%), Gaps = 41/661 (6%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G +P+  +  + +K CV + +   G  IH   ++  +     VG +++N Y K G +A A
Sbjct: 1   GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSL 258
             VF  +   DV  WNA+I  YA  G+  EA+ +  +M  +G I  D  TF+  +  C  
Sbjct: 61  REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 120

Query: 259 VADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            +  + G +I  L+  R  ++  + + NAL++MY K   +  A  VFERM  +DV+SWN 
Sbjct: 121 PSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWNA 180

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNH-------VTFSILLRQCGKLLDLDLGLQLQ 370
           +    + +         F +  L G  P          T +  L  C     L+ G ++ 
Sbjct: 181 IISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIH 240

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            L +  G   E  V ++L+ M+  CG ++ A   F  ++ +N+ +WN +++ Y  + CD 
Sbjct: 241 ALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDK 300

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG------------ 478
           +  + F  +   GV+ N  TF   +  C      +   Q+H  + ++G            
Sbjct: 301 EAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVV 360

Query: 479 --FSSCGYI-----------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
             F+ C  +                  + L+ +Y++ G+L  + +     E  D+ +W  
Sbjct: 361 HMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWNM 420

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++ A V +    EAV +F  ++  G K +     T+L +CA        + IH  + + G
Sbjct: 421 ILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGERG 480

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
            ++E++V +A++D + KC  + GAR AF++     D   +N L+ A A +G   EA++ F
Sbjct: 481 ADSELFVGNALVDMFGKCASLGGARQAFER-IRGKDASSWNVLVAALAQNGDAEEALKQF 539

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +M+   ++P+  TF+ V  ACSH G +++   +F S+   YG+ P P  Y  + D+L R
Sbjct: 540 LQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGR 599

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G+L++A+ VI+ +PF      + +LLS C++HG+ E G   + ++L   P + AA V L
Sbjct: 600 AGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKVAGQVLRWNPGDSAARVAL 659

Query: 760 S 760
           S
Sbjct: 660 S 660



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 155/645 (24%), Positives = 279/645 (43%), Gaps = 51/645 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D +    +L     ++S   G  +H  +++ G    I + N L+ MY KCG      
Sbjct: 2   LLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAR 61

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSM 158
            VFD M  R+++SW  +++A  Q G     ++++  M+ +G + P+     +V+  C   
Sbjct: 62  EVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDP 121

Query: 159 GASEFGYSIHCFAL---KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            A E G  I  FAL   +  ++ +  +G +++N Y+K G + +A  VF  +   DV  WN
Sbjct: 122 SALEAGDKI--FALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDVVSWN 179

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITM-------DKYTFINALQGCSLVADFDIGRQI 268
           A+I   A       A+     M  EG++        D +T  +AL  C+     + GR+I
Sbjct: 180 AIISALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREI 239

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H L+I    E  + + NAL+ MY     +  A + F++MA ++V+SWN +   +  +   
Sbjct: 240 HALVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCD 299

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   +FH+  L G +PN VTF   L  C      + GLQL  +    G   + +V +++
Sbjct: 300 KEAFRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAV 359

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-----------FNCCD-------- 429
           ++MF +C +++ A + F  +  KN+ +WN LL  Y            F   +        
Sbjct: 360 VHMFAKCWSLDDALAAFQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDVITWN 419

Query: 430 ------------ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
                        + ++ F  +   G + N  T+  ++  C          +IH  I + 
Sbjct: 420 MILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLGACAGEALLAEGRRIHELIGER 479

Query: 478 GFSSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           G  S  ++ ++L+  +    + G    +FE   G    D +SW  +++AL   G   EA+
Sbjct: 480 GADSELFVGNALVDMFGKCASLGGARQAFERIRGK---DASSWNVLVAALAQNGDAEEAL 536

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDA 593
             F  +   G KP +     +  +C+  G  ++ K+I   +    G        S + D 
Sbjct: 537 KQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDL 596

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
             + G +  A     +   S D + + TL+ A   HG V    ++
Sbjct: 597 LGRAGFLDEAEEVIKRIPFSQDELPWMTLLSACKVHGDVERGRKV 641


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 189/666 (28%), Positives = 339/666 (50%), Gaps = 13/666 (1%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSM 158
           + FDE+  RN +   L   A  + G     L  ++D+ + +G      A+  V+KVC S+
Sbjct: 59  QAFDEIPHRNTLDHALFDHA--RRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSV 116

Query: 159 GASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                G  +H   ++   ++    VG S+++ Y K   V    +VF ++   +V  W ++
Sbjct: 117 PDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSL 176

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           + GY   G   + + +   M  EG+  +  TF + L   +     D+GR++H   ++   
Sbjct: 177 LTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGC 236

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             ++ + N+L++MY K   ++ A  VF  M  +D++SWNTL  G   N +  +   LFH 
Sbjct: 237 CSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHD 296

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              S +     T++ +++ C  +  L L  QL    L  GF    NV ++L+  + + G 
Sbjct: 297 SRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQ 356

Query: 398 VEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKT-FCNIWESGVEVNGCTFFYVV 455
           +  A  +F  +S  +N+ +W  +++G C    D  +    F  + E GV  N  T+  ++
Sbjct: 357 LGNALDIFLLMSGSQNVVSWTAMING-CIQNGDVPLAAALFSRMREDGVAPNDFTYSTIL 415

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                S    +  QIH  +IKT +     + ++L+ SY      + +       ++ D+ 
Sbjct: 416 TASVAS----LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVV 471

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPF 574
           SW AM++     G +  A  IF  +   G KP+E+ + +++++CA+  A     +  H  
Sbjct: 472 SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAI 531

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            IK   +  + V+SA++  YA+ G I+ A+  F++  +  D++ +N+++  YA HG   +
Sbjct: 532 SIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTD-RDLVSWNSMLSGYAQHGYSQK 590

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+++F +M+   ++    TF+SV+  C+H GLV++G   F SM   YG+ P+ + Y C+V
Sbjct: 591 ALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMV 650

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+ SR G L++A  +IE M F   P V+R+LL  C++H N ELG+ A+EKLL L P + A
Sbjct: 651 DLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSA 710

Query: 755 AHVLLS 760
            +VLLS
Sbjct: 711 TYVLLS 716



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 152/640 (23%), Positives = 288/640 (45%), Gaps = 13/640 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           L   L +  ++  RVLG Q+HG  ++ G    D+ +  +L+ MY K      G +VF+ M
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM 165

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            +RN+V+WT +++  IQ+G     ++++  M+  G  PN     SV+ V  S G  + G 
Sbjct: 166 PKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGR 225

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            +H  ++K       FV  S++N YAK G V  A  VF  + + D+  WN ++ G    G
Sbjct: 226 RVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNG 285

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           +  EAL +          + + T+   ++ C+ +    + RQ+H  +++       +++ 
Sbjct: 286 HDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMT 345

Query: 286 ALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           AL+D Y K+  +  A  +F  M+  ++V+SW  +  G  +N +    A+LF +    G  
Sbjct: 346 ALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVA 405

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  T+S +L      L   +  Q+      C  +    V ++L+  + +    E A S+
Sbjct: 406 PNDFTYSTILTASVASLPPQIHAQVIKTNYECTSI----VGTALLASYSKLCNTEEALSI 461

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           F  +  K++ +W+ +L+ Y     D+D     F  +   G++ N  T   V++ C     
Sbjct: 462 FKMIDQKDVVSWSAMLTCYA-QAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTA 520

Query: 464 QQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
              +G Q H   IK        + S+L+  Y   G ++++          D+ SW +M+S
Sbjct: 521 GVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLS 580

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFN 581
                G++ +A+ +F  +   G + D     +++  CA  G  +  +     + +  G  
Sbjct: 581 GYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGIT 640

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             +   + ++D Y++ G +  A    +        +V+ TL+ A   H  V   +     
Sbjct: 641 PTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVE--LGKLAA 698

Query: 642 MKLANLQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            KL +L+P   AT+V + +  S  G   +   + K MD++
Sbjct: 699 EKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTK 738


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 167/584 (28%), Positives = 291/584 (49%), Gaps = 1/584 (0%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F    +++ + + G V  A RVF  I S     ++ M+ G+A      +AL     M ++
Sbjct: 70  FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +    Y F   L+ C   A+  +G++IHGL+++S     +  +  L +MY K   ++ A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF+RM ++D++SWNT+  G+S+N        +         +P+ +T   +L     L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             + +G ++   A+  GF    N++++L+ M+ +CG++E A  +FD +  +N+ +WN ++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y  N    + +  F  + + GV+    +    +  C    + +    IH   ++ G  
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SLI  Y    ++D +       +   + SW AM+      G   +A+  F  +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                KPD +   +++ + A +      K IH  V++   +  V+V +A++D YAKCG I
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             AR+ FD   +   V  +N +I  Y  HG    A+E+F++M+   ++P+  TF+SV+SA
Sbjct: 490 MIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV+ G   F  M   Y ++ S D YG +VD+L R G L +A   I  MP +P+  
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
           VY ++L  C+IH N    E A+E+L  L P +   HVLL+   R
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 235/498 (47%), Gaps = 33/498 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++HG +VK GF+ D+F    L  MY+KC       +VFD M ER+LVSW  IV+   
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG   M L+M   M      P+   + SV+    ++     G  IH +A++   +    
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ YAK G +  A ++F  +   +V  WN+MI  Y       EA+ +   ML EG
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +     + + AL  C+ + D + GR IH L +   ++ ++S+VN+LI MY K   +D A 
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F ++  + ++SWN +  GF++N  P    + F +      +P+  T+  ++    +L 
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
                  +  + +         VT++L+ M+ +CGA+ +A  +FD +S +++TTWN ++ 
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  +      L+ F  + +  ++ NG TF  V+  C  S                G   
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS----------------GLVE 556

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            G  C  ++K               N +  L M  +GAM+  L   G  +EA   +  ++
Sbjct: 557 AGLKCFYMMK--------------ENYSIELSMDHYGAMVDLLGRAGRLNEA---WDFIM 599

Query: 542 EAGEKPDEYILGTILNSC 559
           +   KP   + G +L +C
Sbjct: 600 QMPVKPAVNVYGAMLGAC 617



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 252/555 (45%), Gaps = 10/555 (1%)

Query: 10  FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
           F+  P      +R R H L   N   ++ +     + L +  SL E         Q+   
Sbjct: 8   FSTVPQIPNPPSRHR-HFLSERNYIPANVYEHPAALLLERCSSLKE-------LRQILPL 59

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           + K G   + F Q  L++++ + G      RVF+ +  +  V +  ++    +  + D  
Sbjct: 60  VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L+ +V M+ +   P  +    ++KVC        G  IH   +K     + F    + N 
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK   V  A +VF  +   D+  WN ++ GY+  G    AL +V SM  E +     T 
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++ L   S +    +G++IHG  +RS  +  ++I  AL+DMY K   ++ A ++F+ M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           ++V+SWN++   + +N+NP +   +F K +  G +P  V+    L  C  L DL+ G  +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L++  G     +V +SLI M+C+C  V+ A S+F  +  + + +WN ++ G+  N   
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            D L  F  +    V+ +  T+  V+              IHG ++++      ++ ++L
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479

Query: 490 IKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           +  Y   G  +     F   +ER  + +W AM+      G    A+ +F  + +   KP+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538

Query: 549 EYILGTILNSCAAIG 563
                +++++C+  G
Sbjct: 539 GVTFLSVISACSHSG 553



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 235/486 (48%), Gaps = 16/486 (3%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ CS + +    RQI  L+ ++ +         L+ ++ +   +D A +VFE +  K  
Sbjct: 44  LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           + ++T+  GF++  +  +    F +       P    F+ LL+ CG   +L +G ++  L
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  GF  +    + L  M+ +C  V  A  VFD +  +++ +WN +++GY  N      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L+   ++ E  ++ +  T   V+          +  +IHG  +++GF S   I ++L+  
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L+ + +  +G    ++ SW +M+ A V   +  EA+ IF  +++ G KP +  +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
              L++CA +G  +R + IH   ++LG +  V V +++I  Y KC ++  A   F +   
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK-LQ 399

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA-----CSHKGLV 667
           S  ++ +N +I+ +A +G   +A+  F +M+   ++P   T+VSV++A      +H    
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
             G ++   +D    +  +      LVDM ++ G +  A+ + ++M  +   T + +++ 
Sbjct: 460 IHGVVMRSCLDKNVFVTTA------LVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 512

Query: 728 GCRIHG 733
           G   HG
Sbjct: 513 GYGTHG 518


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 209/720 (29%), Positives = 362/720 (50%), Gaps = 18/720 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS +   +S   G   HG  +K     D+ L N L+ MY+KCG F     VF  M  R+ 
Sbjct: 171 LSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDT 230

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHC 169
            SW  +VS ++ NG  ++    + +M  + F  +E ++  V+  C  +     FG S+H 
Sbjct: 231 TSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHS 290

Query: 170 FALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             +K+  E     V  S++ FY +LG   AAE VF S S+ ++  WNAMI G        
Sbjct: 291 SVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVN 350

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS---EVECSISIVN 285
           EA+ +   M  +    D  T +  +  C        G+++HG II+      ECS+   N
Sbjct: 351 EAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVG--N 407

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSR 344
           +L+D+Y+K +    A  +F  M  +D+ISWNT+  G+S N + G+ A    K +LS G  
Sbjct: 408 SLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLS 467

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
               T   ++  C    DL+ G  +    L  GFL   +  +SLI+M+  CG    A S+
Sbjct: 468 CTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSL 527

Query: 405 FDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN--GCTFFYVVETCCRS 461
            ++++   +I +WN  + G   N    D L+ F     S + +N    T   V+  C   
Sbjct: 528 LESITPISDIISWNTAIVGCVQNGLYGDALEAF-QFMHSTLTLNPDSITLVSVLSVCGNL 586

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAM 520
           + Q +   IH   +K        + ++L+  Y  FG  +++   FS+   R ++ SW  M
Sbjct: 587 KLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGR-NLCSWNCM 645

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S          A   +  + +   +P+E  +  I+ +C  +G  ++ K+IH  V++ G 
Sbjct: 646 ISGFAQNNEGLRAFQFYKKMEDF--EPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGL 703

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            T V+++++++D Y+KCG +  +   F+ S   + +  +N++I A+  HGL  +++EIF 
Sbjct: 704 QTNVFISASLVDMYSKCGRLDISIRVFESSAEKS-IACWNSMISAFGFHGLGLKSIEIFW 762

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM  + ++ +++TF++++SACSH GL D+G   +  M   +G+ P+P+ + C+VDML R 
Sbjct: 763 KMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRA 822

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L++A   +E +P + +  V+ +LLS C      ++ E  ++ LL L P+N   +V +S
Sbjct: 823 GRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMS 882



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 165/682 (24%), Positives = 308/682 (45%), Gaps = 28/682 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H   +K G   D  ++ ++I  YS+       L+VFDE A  +L+ W   +SA   N  
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 126 FDMGLKMYVDMKTNGFMPNEFAV-GSVMKVCVSMGAS-----EFGYSIHCFALKIRIEKN 179
           +   + ++       +M +   V  S   V +  GAS     E G + H  ALK  ++ +
Sbjct: 145 YGDAVVLF------RWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTD 198

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +  ++++ YAK GD  ++E VF  +   D   WN+M+ G    G    +      M+ 
Sbjct: 199 LSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR 258

Query: 240 EGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGM 297
                D+ +    L  CS + D F  G  +H  +I+   E  + S+ N+LI  Y +    
Sbjct: 259 SSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFP 318

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A +VF   ++K++++WN +  G  EN    +   +F + + S ++P+  T   ++  C
Sbjct: 319 EAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISAC 377

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           G    L  G ++    +  G + EE +V +SL+ ++ +C     A  +F  +  +++ +W
Sbjct: 378 GDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISW 437

Query: 417 NELLSGYCFNCCDADVLKT-FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           N ++SGY  N    +  K  F  +   G+     T   V+ +C   ++      +H  I+
Sbjct: 438 NTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL 497

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAV 534
           K GF +     +SLI  Y+  G    +F        + D+ SW   +   V  G   +A+
Sbjct: 498 KYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDAL 557

Query: 535 TIF---HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
             F   HS +     PD   L ++L+ C  +      KSIH   +K      + V +A++
Sbjct: 558 EAFQFMHSTLTL--NPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALL 615

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             Y + GD + A + F  S    ++  +N +I  +A +     A + + KM+  + +P++
Sbjct: 616 TMYFRFGDTESAELIF-SSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKME--DFEPNE 672

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            + V ++ AC+  G + +G  +   +  ++G+Q +      LVDM S+ G L+ +  V E
Sbjct: 673 ISIVGIICACTQLGDLRQGKNIHGHV-VRFGLQTNVFISASLVDMYSKCGRLDISIRVFE 731

Query: 712 IMPFQPSPTVYRSLLSGCRIHG 733
               + S   + S++S    HG
Sbjct: 732 -SSAEKSIACWNSMISAFGFHG 752



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 235/525 (44%), Gaps = 18/525 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HC 224
           ++HC ALK     +P V  SV+  Y+++ DV +A +VF   ++ D+  WNA I     +C
Sbjct: 84  ALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNC 143

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
            YG +A+ +   M+     +D  + +  L G S     + G   HG+ ++  ++  +S+ 
Sbjct: 144 RYG-DAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLW 202

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N L+DMY K      +  VF+RM  +D  SWN++  G   N     +A  F + + S  +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 345 PNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAH 402
            + V+ S +L  C  L DL   G  +    +  G+ D   +V +SLI  +   G  E A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE--SGVEVNGCTFFYVVETCCR 460
            VF + S KN+ TWN ++ G   N     V +  C   E  S  + +  T   ++  C  
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVEN---DRVNEAMCMFQEMRSKNQPDVATLVTIISACGD 379

Query: 461 SENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                   ++HG IIK G  +  C  + +SL+  Y+       +          D+ SW 
Sbjct: 380 HGLLPEGKEVHGYIIKKGHIYEECS-VGNSLLDLYMKCNDPSTARILFRTMPMRDLISWN 438

Query: 519 AMMSALVHQGH-NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            M+S          EA  +F  L+  G       +  ++ SC         KS+H F++K
Sbjct: 439 TMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK 498

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            GF T V  A+++I  Y  CGD   A    +     +D+I +NT I+    +GL  +A+E
Sbjct: 499 YGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALE 558

Query: 638 IFDKM-KLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSM 677
            F  M     L P   T VSV+S C +  L   G    C+  K +
Sbjct: 559 AFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRL 603



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 12/292 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D I L   LS+  NLK + LG  +H   +K     ++ ++N L+ MY + G      
Sbjct: 569 LNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAE 628

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  +  RNL SW  ++S   QN E     + Y  M+   F PNE ++  ++  C  +G
Sbjct: 629 LIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMED--FEPNEISIVGIICACTQLG 686

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G +IH   ++  ++ N F+  S+++ Y+K G +  + RVF S +   + CWN+MI 
Sbjct: 687 DLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMIS 746

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR----- 274
            +   G G +++ +   M   G+   + TFI  L  CS     D G + + L+I      
Sbjct: 747 AFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGII 806

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSEN 325
              E  + +V    DM  ++  +  A K  E +  K     W  L    S+ 
Sbjct: 807 PTPEHHVCVV----DMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKK 854



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 1/202 (0%)

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E    V  +H A +K+G      + +S+I +Y     + ++ +  + A   D+  W A +
Sbjct: 77  EEADGVAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAI 136

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           SAL       +AV +F  +V+     D   +  +L+  +   + +   + H   +K   +
Sbjct: 137 SALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLD 196

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           T++ + + ++D YAKCGD   + + F Q     D   +N+++     +GL   +   F +
Sbjct: 197 TDLSLWNTLMDMYAKCGDFYSSEVVF-QRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 642 MKLANLQPSQATFVSVMSACSH 663
           M  ++ Q  + +   V+SACSH
Sbjct: 256 MVRSSFQADEVSLSCVLSACSH 277


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  301 bits (772), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 182/636 (28%), Positives = 314/636 (49%), Gaps = 8/636 (1%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKNPF 181
           +G  +  LK    M+       E    +++++C +  G SE  Y        +    +  
Sbjct: 11  SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+ + + GDV  A  VF  +   D+  WN ++GGY   G+  EAL +   +L+ G
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D YTF + L+ C+   D   GR++H  ++R + +  + +VNALI MY+K   +  A 
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F++M  +D ISWN +  G+ EN    +   LF +       P+ +T + ++  C  L 
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D  LG QL    +   +    +V +SLI M+   G  + A SVF  +  +++ +W  ++S
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G   N      L+T+  +  +G   +  T   V+  C       M  ++H    +TG   
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHIL 370

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SLI  Y    +++ + E  +     D+ SW ++++ L       EA+  F  ++
Sbjct: 371 YVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMI 430

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KP+   L + L++CA +GA    K IH   +K G   + ++ +A++D Y +CG ++
Sbjct: 431 -LKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMR 489

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F+   N  DV  +N L+  YA  G  +  ME+F +M  + + P   TF+S++ AC
Sbjct: 490 TALNQFN--LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCAC 547

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S  G+V +G   F+ M   Y + P+   Y C+VD+L R G L +A   IE MP +P P +
Sbjct: 548 SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI 607

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           + +LL+ CRIH +  LGE A++ +     K DA  +
Sbjct: 608 WGALLNACRIHRHVLLGELAAQHIF----KQDAESI 639



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 272/616 (44%), Gaps = 31/616 (5%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           + L N L++M+ + G  G    VF  M ER+L SW ++V    + G FD  L +Y  +  
Sbjct: 69  VRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILW 128

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  P+ +   SV++ C        G  +H   ++   + +  V  +++  Y K GDV +
Sbjct: 129 AGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVS 188

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  +F  + + D   WNAMI GY       E L +   M    I  D  T  + +  C L
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D  +G Q+H  ++R+  + +IS+ N+LI MY+       A  VF  M  +DV+SW T+
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G  +N  P +    +    ++G+ P+ VT + +L  C  L  LD+G++L  LA   G 
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
           +    V +SLI M+ +C  +E A  +F  +  K++ +W  +++G   N    + L  F  
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +     + N  T    +  C R        +IH   +K G    G++ ++++  YV  G+
Sbjct: 429 MILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +  +    N  E+ D+ +W  +++    +G     + +F  +VE+   PD+    ++L +
Sbjct: 488 MRTALNQFNLNEK-DVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCA 546

Query: 559 CAAIGA-------YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           C+  G        +QR K      +       +   + V+D   + G +  A    ++  
Sbjct: 547 CSRSGMVTEGLEYFQRMK------VNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMP 600

Query: 612 NSNDVIVYNTLIMA--YAHHGLVSE--AMEIFDK--------MKLANLQPSQATF---VS 656
              D  ++  L+ A     H L+ E  A  IF +        + L NL      +     
Sbjct: 601 IKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAK 660

Query: 657 VMSACSHKGL-VDKGC 671
           V      +GL VD GC
Sbjct: 661 VRRTMKEEGLIVDPGC 676



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 225/474 (47%), Gaps = 22/474 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G +VH H+V+  F  D+ + N LI MY KCG       +FD+M  R+ +SW  ++S  
Sbjct: 152 VRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGY 211

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            +N E   GL+++  M+     P+   + SV+  C  +G    G  +H + ++   + N 
Sbjct: 212 FENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNI 271

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S++  Y  +G    AE VF  +   DV  W  +I G        +AL    +M   
Sbjct: 272 SVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEIT 331

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   D+ T  + L  C+ +   D+G ++H L  R+     + + N+LIDMY K   ++ A
Sbjct: 332 GTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKA 391

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F ++ DKDVISW ++  G   N    +    F K IL  S+PN VT    L  C ++
Sbjct: 392 LEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILK-SKPNSVTLISALSACARV 450

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++   AL  G   +  + ++++ ++ RCG +  A + F N++ K++  WN LL
Sbjct: 451 GALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILL 509

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY      A V++ F  + ES +  +  TF  ++  C RS      G +   +      
Sbjct: 510 TGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRS------GMVTEGLEYFQRM 563

Query: 481 SCGYICSSLIKSYV-------NFGQLDNSFEFSNGAERL----DMASWGAMMSA 523
              Y  +  +K Y          G+L+ + EF    ER+    D A WGA+++A
Sbjct: 564 KVNYHITPNLKHYACVVDLLGRAGKLNEAHEF---IERMPIKPDPAIWGALLNA 614



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 181/382 (47%), Gaps = 4/382 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +   +S  E L    LGTQ+H ++V+  +  +I + N+LI MY   G++     VF
Sbjct: 235 DLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVF 294

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R++VSWT I+S  + N   D  L+ Y  M+  G MP+E  + SV+  C S+G  +
Sbjct: 295 SGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLD 354

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H  A +        V  S+++ Y+K   +  A  +F+ I   DV  W ++I G  
Sbjct: 355 MGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLR 414

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                FEAL     M+ +    +  T I+AL  C+ V     G++IH   +++ +     
Sbjct: 415 INNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGF 473

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++D+Y++   M  A   F  + +KDV +WN L  G+++         LF + + S 
Sbjct: 474 LPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESE 532

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             P+ VTF  LL  C +   +  GL+  Q + ++          + ++ +  R G +  A
Sbjct: 533 INPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEA 592

Query: 402 HSVFDNVSYK-NITTWNELLSG 422
           H   + +  K +   W  LL+ 
Sbjct: 593 HEFIERMPIKPDPAIWGALLNA 614



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 72/346 (20%), Positives = 143/346 (41%), Gaps = 63/346 (18%)

Query: 2   RILKRAFLFADKPSCHFHATRKRIHRLCGNNQ-FCSDSFLRK-------DPIFLAKSLSL 53
           RI K   +F   P     +    I+ L  NN+ F +  F RK       + + L  +LS 
Sbjct: 387 RIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSA 446

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
              + + + G ++H H +K G   D FL N ++ +Y +CG     L  F+ + E+++ +W
Sbjct: 447 CARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAW 505

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG--------- 164
            ++++   Q G+  M ++++  M  +   P++    S++  C   G    G         
Sbjct: 506 NILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKV 565

Query: 165 -YSI-----------------------HCFALKIRIEKNPFVGCSVLNF-----YAKLGD 195
            Y I                       H F  ++ I+ +P +  ++LN      +  LG+
Sbjct: 566 NYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGE 625

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AA     +   ++ +G +  +   YA  G   E   V  +M  EG+ +D         G
Sbjct: 626 LAAQH--IFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDP--------G 675

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY---IKSSGMD 298
           CS V   ++  ++H  +        +  +N +++ +   +K+SG +
Sbjct: 676 CSWV---EVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFN 718


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 177/597 (29%), Positives = 315/597 (52%), Gaps = 6/597 (1%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H  A+K+    + +   ++LN Y K  ++ +A+ +F  +   D   WN MI G+ +CG  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             + +V+  M   G  +D+YTF + L+G +    F +G+Q+H +II+     ++   +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   ++ A+  F  ++  + +SWN +  G+++  +      L       G + + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T++ LL         +L  QL    +  G      + ++LI  + +CG+++ A  +FD+
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDS 260

Query: 408 -VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
               +++ TWN LL+ Y     +    K   ++ E G E +  ++  ++ + C +EN   
Sbjct: 261 SAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSII-SACFNENISN 319

Query: 467 VGQ-IHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            G+ +HG +IK GF     I ++LI  Y+  ++G +  +       E  D  SW ++++ 
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L   G + +AV  F  +  A    D Y    +L SC+ +  +Q  + IH   +K G  + 
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESN 439

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            +V+S++I  Y+KCG I+ AR +F+++ + N  I +N L+  YA HG  + A+++F  M+
Sbjct: 440 EFVSSSLIFMYSKCGIIEDARRSFEEA-SKNSSITWNALMFGYAQHGQCNVALDLFFLME 498

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              ++    TFV+V++ACSH GLV++GC   + M+S YG+ P  + Y C VD+  R+G L
Sbjct: 499 EKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E+AK +IE MPF+P  TV+++ L  CR  GN EL    +  LL + P+    +VLLS
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLS 615



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 261/566 (46%), Gaps = 10/566 (1%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H   VKLG   D++  NN++  Y KC        +FDEM  R+ VSW  +++  I  G  
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
           +    +   M++ GF  + +  GS++K     G    G  +H   +K+   +N + G ++
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L+ YAK   +  A   F SIS  +   WNAMI GYA  G    A  ++  M  EG  +D 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 247 YTFINALQGCSLVADFD---IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            T+   L    L+ D D   +  Q+HG II+  +E   ++ NALI  Y K   +D A ++
Sbjct: 201 GTYAPLL---PLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRI 257

Query: 304 FERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           F+  A  +D+++WN+L   +           L       G  P+  +++ ++  C     
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC--GAVEMAHSVFDNVSYKNITTWNELL 420
            + G  L  L +  GF     ++++LI M+ +   G+++ A  +F+++ +K+  +WN +L
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G        D +K+F ++  + ++++  +F  V+ +C      Q+  QIH   +K G  
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLE 437

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  ++ SSLI  Y   G ++++      A +    +W A+M      G  + A+ +F  +
Sbjct: 438 SNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLM 497

Query: 541 VEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            E   K D      +L +C+ IG   Q  K +       G    +   +  +D Y + G 
Sbjct: 498 EEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGR 557

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMA 625
           ++ A+   ++     D  V+ T + A
Sbjct: 558 LEEAKALIEEMPFKPDTTVWKTFLGA 583



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 190/400 (47%), Gaps = 3/400 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  I+K+G+  +++  + L+ MY+KC         F  +++ N VSW  +++   
Sbjct: 117 LGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYA 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+ +    +   M+  G   ++     ++ +            +H   +K  +E    
Sbjct: 177 QAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNT 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  +++  Y+K G +  A+R+F S +   D+  WN+++  Y        A  ++  M   
Sbjct: 237 MCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEH 296

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS--GMD 298
           G   D Y++ + +  C      + GR +HGL+I+   E S+ I NALI MY+KS    M 
Sbjct: 297 GFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMK 356

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +FE +  KD +SWN++  G S+  +       F     +    +H +FS +LR C 
Sbjct: 357 EALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCS 416

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L    LG Q+  LAL  G    E V+SSLI+M+ +CG +E A   F+  S  +  TWN 
Sbjct: 417 DLATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNA 476

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           L+ GY  +      L  F  + E  V+++  TF  V+  C
Sbjct: 477 LMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTAC 516



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 19/313 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY--FGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  +HG ++K GF   + + N LI+MY K  Y      L +F+ +  ++ VSW  I++  
Sbjct: 321 GRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGL 380

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G  +  +K ++ M++     + ++  +V++ C  +   + G  IH  ALK  +E N 
Sbjct: 381 SQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNE 440

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y+K G +  A R F   S +    WNA++ GYA  G    AL++   M  +
Sbjct: 441 FVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEK 500

Query: 241 GITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSE-VECSISIVNALIDMYI 292
            + MD  TF+  L  CS +   + G          +G+  R E   C+       +D+Y 
Sbjct: 501 KVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACA-------VDLYG 553

Query: 293 KSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
           +S  ++ A  + E M  K D   W T  G      N  + A      +L      H T+ 
Sbjct: 554 RSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNI-ELACQVAGHLLEMEPEEHCTYV 612

Query: 352 ILLRQCGKLLDLD 364
           +L    G L+  D
Sbjct: 613 LLSNMYGNLMRWD 625


>gi|302761660|ref|XP_002964252.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
 gi|300167981|gb|EFJ34585.1| hypothetical protein SELMODRAFT_82268 [Selaginella moellendorffii]
          Length = 740

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 184/700 (26%), Positives = 339/700 (48%), Gaps = 12/700 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H   +      +  L N+LIAMY KC       R+F  +  ++ V+W  ++ A   
Sbjct: 29  GRQLHAAAIARRLDRETLLANSLIAMYGKCHSLAEAERLFHSLERKDPVTWNTMIGAFTH 88

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+  + + +Y  M +     N      V++ C ++G  + G ++           +  V
Sbjct: 89  NGQPRLAVDLYARMGSGD--RNSVTFLGVLEACSALGDLDLGRTVDSSIAGSEWRDDVVV 146

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +V+  Y +   +  A + F S+   +V  WNA++  YA  G+   AL  +  M  +G 
Sbjct: 147 GTAVVGMYGRCRSIEEARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGT 206

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  TF+  ++  + +    +GR IH  I R        + NALI MY K   ++ + +
Sbjct: 207 KLNPVTFLLVIEVATQLGSLSLGRSIHLRITRGGDGGGTRLENALISMYGKLENLEESLR 266

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLL 361
           VFE MA+KDV+SW  +   +++N +      L+ +  L    RP+ VT++ +L  C  L 
Sbjct: 267 VFEVMANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLG 326

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL  G ++        F  +  + +SL+ ++ +C  +E A  VFD++S ++   +N +L+
Sbjct: 327 DLSTGKEIYARVCSSDFDVDAALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLA 386

Query: 422 GYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            Y  N    D L  +  + +  GVE    +F   +  C   ++      +HG I   G  
Sbjct: 387 AYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIK 446

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L+  Y   G L+ +          D+ S+ AM+ A    G    A+TI+  +
Sbjct: 447 LDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEM 506

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            + G KPDE    ++L++C++  A +    +H  ++  GF  +  + +A++  YAK G++
Sbjct: 507 DQQGIKPDEVAFISVLSACSSNLATE----VHTEIVHAGFEADGALGTALVCMYAKSGNL 562

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + +R  F  +  S D + +  +I A+A HG   EA  +F  M L  +    +T  S++ +
Sbjct: 563 EESRRIFG-AMKSRDSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGSTLTSMLVS 619

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
            S  G VD     F +M   +G  P+ + Y CLVD+L+R+G + +AK +++ MP +P   
Sbjct: 620 YSQSG-VDAARGFFVAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMPLEPDFV 678

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +LL  C+ HG+ E  + A+  +L +   +  A+++LS
Sbjct: 679 PWMTLLGACKTHGDLEQAKSAARGVLEVDSHSPGAYLVLS 718



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/607 (24%), Positives = 285/607 (46%), Gaps = 25/607 (4%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+    +P+   + S +  C S G    G  +H  A+  R+++   +  S++  Y K   
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLLANSLIAMYGKCHS 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +A AER+F+S+   D   WN MIG + H G    A+++ + M       +  TF+  L+ 
Sbjct: 61  LAEAERLFHSLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEA 118

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           CS + D D+GR +   I  SE    + +  A++ MY +   ++ A + F+ M  K+V+SW
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEEARQRFDSMPVKNVVSW 178

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L   ++ N +P        +  L G++ N VTF +++    +L  L LG  +      
Sbjct: 179 NALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRITR 238

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G      + ++LI M+ +   +E +  VF+ ++ K++ +W  +++ Y  N  +   L+ 
Sbjct: 239 GGDGGGTRLENALISMYGKLENLEESLRVFEVMANKDVVSWTAMITAYAQNGHERLALEL 298

Query: 436 FCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
           +  +  E  V  +  T+  V+  C    +     +I+  +  + F     + +SL+  Y 
Sbjct: 299 YRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLYG 358

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILG 553
               L+++ E  +     D  ++ AM++A    GH  +A+ ++  +++  G +P +    
Sbjct: 359 KCHCLEDAKEVFDSISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFA 418

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
             L +C A+      KS+H  +   G   +  +A+ ++  Y + G ++ A   F+Q    
Sbjct: 419 VALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQ-MPV 477

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-------HKGL 666
            DV  Y+ +I AY+ +G    AM I+ +M    ++P +  F+SV+SACS       H  +
Sbjct: 478 KDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEI 537

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           V  G   F++ D   G          LV M +++G LE+++ +   M  + S + + +++
Sbjct: 538 VHAG---FEA-DGALGT--------ALVCMYAKSGNLEESRRIFGAMKSRDSVS-WTAMI 584

Query: 727 SGCRIHG 733
           S    HG
Sbjct: 585 SAFARHG 591



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 250/542 (46%), Gaps = 25/542 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P+     + ++  L S  LG  +H  I + G      L+N LI+MY K       LRVF
Sbjct: 209 NPVTFLLVIEVATQLGSLSLGRSIHLRITRGGDGGGTRLENALISMYGKLENLEESLRVF 268

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGAS 161
           + MA +++VSWT +++A  QNG   + L++Y  M+      P+     +V+  C  +G  
Sbjct: 269 EVMANKDVVSWTAMITAYAQNGHERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDL 328

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  I+        + +  +  S++  Y K   +  A+ VF SISS D   +NAM+  Y
Sbjct: 329 STGKEIYARVCSSDFDVDAALKTSLVGLYGKCHCLEDAKEVFDSISSRDRLAYNAMLAAY 388

Query: 222 AHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           A  G+  +ALN+   M+  EG+     +F  AL  C+ + D   G+ +HG I  + ++  
Sbjct: 389 AQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLD 448

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             +   L+  Y +   ++ A ++FE+M  KDV S++ + G +S+N   G+  +++ +   
Sbjct: 449 EVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQ 508

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+ V F  +L  C      +L  ++    +H GF  +  + ++L+ M+ + G +E 
Sbjct: 509 QGIKPDEVAFISVLSACSS----NLATEVHTEIVHAGFEADGALGTALVCMYAKSGNLEE 564

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  +F  +  ++  +W  ++S +  + C+A +L  F  +   G++  G T   ++     
Sbjct: 565 SRRIFGAMKSRDSVSWTAMISAFARHGCEAKLL--FQGMALDGIDAKGSTLTSMLV---- 618

Query: 461 SENQQMVGQIHG--AIIKTGFSSCG----YICSSLIKSYVNFGQLDNSFEFSNGAE-RLD 513
           S +Q  V    G    ++  F +C     Y C  L+      G++  + E  +      D
Sbjct: 619 SYSQSGVDAARGFFVAMQGDFGTCPAAEHYSC--LVDLLARSGRVGEAKELVDSMPLEPD 676

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEA-GEKPDEYILGTILNSCAAIGAYQRTKSIH 572
              W  ++ A    G   +A +    ++E     P  Y++ + L  C+  G    T  + 
Sbjct: 677 FVPWMTLLGACKTHGDLEQAKSAARGVLEVDSHSPGAYLVLSTL--CSGWGTKLETPKL- 733

Query: 573 PF 574
           PF
Sbjct: 734 PF 735



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 186/438 (42%), Gaps = 32/438 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +  A  L     L     G +++  +    F  D  L+ +L+ +Y KC       
Sbjct: 308 VRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLYGKCHCLEDAK 367

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSM 158
            VFD ++ R+ +++  +++A  QNG  D  L +Y   M   G  P + +    +  C ++
Sbjct: 368 EVFDSISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTAL 427

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G S+H       I+ +  +  +++ FY ++G +  AER+F  +   DV  ++AMI
Sbjct: 428 KDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMI 487

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G Y+  G    A+ + + M  +GI  D+  FI+ L  CS     ++  ++H  I+ +  E
Sbjct: 488 GAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACS----SNLATEVHTEIVHAGFE 543

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              ++  AL+ MY KS  ++ + ++F  M  +D +SW  +   F+  ++  +   LF   
Sbjct: 544 ADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFA--RHGCEAKLLFQGM 601

Query: 339 ILSGSRPNHVTF-SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            L G      T  S+L+      +D   G     +    G        S L+ +  R G 
Sbjct: 602 ALDGIDAKGSTLTSMLVSYSQSGVDAARGF-FVAMQGDFGTCPAAEHYSCLVDLLARSGR 660

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDAD---------------------VLKT 435
           V  A  + D++  + +   W  LL G C    D +                     VL T
Sbjct: 661 VGEAKELVDSMPLEPDFVPWMTLL-GACKTHGDLEQAKSAARGVLEVDSHSPGAYLVLST 719

Query: 436 FCNIWESGVEVNGCTFFY 453
            C+ W + +E     F+Y
Sbjct: 720 LCSGWGTKLETPKLPFYY 737


>gi|302796316|ref|XP_002979920.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
 gi|300152147|gb|EFJ18790.1| hypothetical protein SELMODRAFT_111891 [Selaginella moellendorffii]
          Length = 719

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 194/685 (28%), Positives = 331/685 (48%), Gaps = 44/685 (6%)

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           L+  Y KCG       +F  M ER+L+SWT +++   Q G     L +Y +M  +G  P+
Sbjct: 68  LLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYREMLMDGVSPS 127

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
                S++  C  +G+      +H    +   ++   +   V+  Y + G V  A+ VF 
Sbjct: 128 RITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCGSVENAKLVFD 187

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-VADFD 263
           ++   DV  W +MI  YA  G   +A+ +   M  EG   +K TF+ A++ C+  +A  +
Sbjct: 188 AMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEACAKSLAPEE 247

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSS-GMDYAFKVFERMADKDVISWNTLFGGF 322
               +H  +I S +E  + +  AL++MY KS+  +  A ++F+ +  +D + WN L   +
Sbjct: 248 EAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVEKRDNVVWNALIAAY 307

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           +++                G R              + LDL   +Q Q       F  + 
Sbjct: 308 AQH----------------GCRD-------------RALDLLEQMQRQ------SFESDS 332

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFD-NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            V ++L+ M+ +CG  E A  +F+ +   +N+ +WN +++ +  N      +  F  +  
Sbjct: 333 IVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQL 392

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           +GV  +  T   V+  C      +    +     + G+       ++L+  +     LD 
Sbjct: 393 AGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCETLDA 452

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQ-----GHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           + E        D  SW AM++A  +      G   E+  +   +   G  PD   L T+L
Sbjct: 453 AVEVFESMHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVL 512

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++CAA  A  + +++H F  + G  ++V VA+ V+D Y KCG +  AR   D+     D 
Sbjct: 513 SACAAGSAIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDK-MAKLDE 571

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N+L+  YA HG   E +E F +M+      ++ TF+SV+ ACSH GLV +GC  F S
Sbjct: 572 VTWNSLLAGYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSS 631

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M   YG QP  +  GC++D+L R G+L +AK ++  MPF+P+   + SLL  C++HGN E
Sbjct: 632 MIGDYGFQPIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVHGNLE 691

Query: 737 LGEWASEKLLLLLPKNDAAHVLLSK 761
           LG  A+ K+L   P+N AAH+LLS+
Sbjct: 692 LGRDAALKVLEFDPENAAAHMLLSE 716



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 147/630 (23%), Positives = 286/630 (45%), Gaps = 57/630 (9%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +++A  Q+G +     ++  +  +G +PN+ A+ + +  C+   A     S+H  A +I 
Sbjct: 1   MITANAQSGNYTQAFALFQKLHVHGVLPNQIALVATLNSCL---ADHQVRSVHECAREIH 57

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E    V  ++LN Y K GD+ +A  +F  +   D+  W A+I GYA  G+  +AL++  
Sbjct: 58  CEHEKIVATALLNAYGKCGDLESAGAIFRGMEERDLISWTALITGYAQFGHSRQALDLYR 117

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            ML +G++  + TF++ L  C+ +        +H  I +S  +  +SI N ++ MY +  
Sbjct: 118 EMLMDGVSPSRITFLSLLSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCG 177

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A  VF+ M  +DVISW ++   ++++ +      L+ +  L G +PN VTF   + 
Sbjct: 178 SVENAKLVFDAMPRRDVISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAME 237

Query: 356 QCGKLLDLDLGLQLQCLALH-----CGFLDEENVTSSLIYMFCRCG-AVEMAHSVFDNVS 409
            C K     L  + +  ALH      G   +  V ++L+ M+ +    +  A  +FD V 
Sbjct: 238 ACAK----SLAPEEEAEALHRCVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVE 293

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            ++   WN L++ Y                                +  CR     ++ Q
Sbjct: 294 KRDNVVWNALIAAY-------------------------------AQHGCRDRALDLLEQ 322

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQG 528
           +     +  F S   + ++L+  Y   G  +++      + RL ++ SW  +++     G
Sbjct: 323 MQ----RQSFESDSIVRNALMNMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNG 378

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
            +  ++ +FH +  AG   D   L T+L +C    A +  + +     + G++ EV   +
Sbjct: 379 EHQRSMVLFHRMQLAGVPADRATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQT 438

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH-----GLVSEAMEIFDKMK 643
           A++  +AKC  +  A   F+ S +  D   +N ++ AY +H     G   E+ ++  +M+
Sbjct: 439 ALVLMHAKCETLDAAVEVFE-SMHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQ 497

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           +    P   T V+V+SAC+    + KG  + +   ++ G+         +VD   + G L
Sbjct: 498 VDGAVPDTVTLVTVLSACAAGSAIAKGRAVHR-FAAENGLMSDVAVANGVVDFYGKCGCL 556

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            +A+ V++ M  +     + SLL+G   HG
Sbjct: 557 LEARAVLDKMA-KLDEVTWNSLLAGYAQHG 585



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 131/589 (22%), Positives = 250/589 (42%), Gaps = 44/589 (7%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS    L S    + VH HI + G    + +QN ++ MY +CG       VFD M  R++
Sbjct: 135 LSACTKLGSLREASLVHDHIRQSGNQQGLSIQNGVVCMYHRCGSVENAKLVFDAMPRRDV 194

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV-SMGASEFGYSIHC 169
           +SWT +++A  Q+G  D  +++Y  M+  G  PN+    + M+ C  S+   E   ++H 
Sbjct: 195 ISWTSMIAAYAQSGSCDDAIRLYRRMELEGEKPNKVTFLAAMEACAKSLAPEEEAEALHR 254

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             ++  +E +  V  +++N Y K    +  A+ +F  +   D   WNA+I  YA  G   
Sbjct: 255 CVIESGLETDVVVATALVNMYGKSARTLGRAQEIFDGVEKRDNVVWNALIAAYAQHGCRD 314

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            AL+++  M  +    D                          I+R          NAL+
Sbjct: 315 RALDLLEQMQRQSFESDS-------------------------IVR----------NALM 339

Query: 289 DMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +MY K    + A ++FE     ++VISWNT+    ++N    ++  LFH+  L+G   + 
Sbjct: 340 NMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVPADR 399

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T   +L  C     L  G  ++ LA   G+  E    ++L+ M  +C  ++ A  VF++
Sbjct: 400 ATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFES 459

Query: 408 VSYKNITTWNELLSGYCFNCCD-----ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           + +++  +WN +++ Y ++ C       +  K    +   G   +  T   V+  C    
Sbjct: 460 MHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGS 519

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
                  +H    + G  S   + + ++  Y   G L  +    +   +LD  +W ++++
Sbjct: 520 AIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMAKLDEVTWNSLLA 579

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFN 581
                G+  E +  F  +   G   +     ++L++C+ +G   +  K     +   GF 
Sbjct: 580 GYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQ 639

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
                   +ID   + G +  A+M   +     ++I + +L+ +   HG
Sbjct: 640 PIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLLGSCKVHG 688



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 172/406 (42%), Gaps = 9/406 (2%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
           R  G  Q   D   ++D +     ++       R     +   + +  F +D  ++N L+
Sbjct: 280 RTLGRAQEIFDGVEKRDNVVWNALIAAYAQHGCRDRALDLLEQMQRQSFESDSIVRNALM 339

Query: 87  AMYSKCGYFGWGLRVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
            MY KCG     LR+F+     +N++SW  +++   QNGE    + ++  M+  G   + 
Sbjct: 340 NMYGKCGCAEDALRLFEASPRLQNVISWNTVIAVHAQNGEHQRSMVLFHRMQLAGVPADR 399

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
             + +V+  C +  A   G  +   A +           +++  +AK   + AA  VF S
Sbjct: 400 ATLLTVLYACTNPAALRTGRIVRELATQRGYHHEVKFQTALVLMHAKCETLDAAVEVFES 459

Query: 206 ISSDDVGCWNAMIG--GYAHC---GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +   D   WNAM+   GY  C   G   E+  ++  M  +G   D  T +  L  C+  +
Sbjct: 460 MHHRDTPSWNAMVAAYGYHACSLNGRWKESFKLLQQMQVDGAVPDTVTLVTVLSACAAGS 519

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               GR +H     + +   +++ N ++D Y K   +  A  V ++MA  D ++WN+L  
Sbjct: 520 AIAKGRAVHRFAAENGLMSDVAVANGVVDFYGKCGCLLEARAVLDKMAKLDEVTWNSLLA 579

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFL 379
           G++++    +T   F +    G   N +TF  +L  C  +  +  G +    +    GF 
Sbjct: 580 GYAQHGYGVETLEAFTEMQHRGYSANRITFMSVLHACSHVGLVAEGCKYFSSMIGDYGFQ 639

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYC 424
             E     +I +  R G +  A  +   + +K N+  W  LL G C
Sbjct: 640 PIEEHCGCMIDLLGRAGHLSEAKMLLARMPFKPNLIAWMSLL-GSC 684


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/675 (29%), Positives = 339/675 (50%), Gaps = 19/675 (2%)

Query: 100 RVFDEMAERN-LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP---NEFAVGSVMKVC 155
           ++FD  ++RN   S    +S +++       L ++ +    G+     +E  +   +K C
Sbjct: 29  KLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC 88

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
              G  + G  IH F+          V  +V+  Y K G    A  +F ++   DV  WN
Sbjct: 89  --RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            ++ G+        ALN V  M   G+  D +T+  AL  C     F +G Q+   ++++
Sbjct: 147 TILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASL 334
            +E  + + N+ I MY +S     A +VF+ M+ KD+ISWN+L  G S+    G +   +
Sbjct: 204 GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVI 263

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F   +  G   +HV+F+ ++  C    DL L  Q+  L +  G+     V + L+  + +
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSK 323

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG +E   SVF  +S +N+ +W  ++S         D +  F N+   GV  N  TF  +
Sbjct: 324 CGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGL 378

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +     +E  +   +IHG  IKTGF S   + +S I  Y  F  L+++ +        ++
Sbjct: 379 INAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREI 438

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--AYQRTKSIH 572
            SW AM+S     G +HEA+ +F S   A   P+EY  G++LN+ A     + ++ +  H
Sbjct: 439 ISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCH 497

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             ++KLG N+   V+SA++D YAK G+I  +   F++    N   V+ ++I AY+ HG  
Sbjct: 498 AHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ-FVWTSIISAYSSHGDF 556

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
              M +F KM   N+ P   TF+SV++AC+ KG+VDKG  +F  M   Y ++PS + Y C
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +VDML R G L++A+ ++  +P  P  ++ +S+L  CR+HGN ++G   +E  + + P+ 
Sbjct: 617 MVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 676

Query: 753 DAAHVLLSKRKRQRE 767
             ++V +     ++E
Sbjct: 677 SGSYVQMYNIYAEKE 691



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 264/547 (48%), Gaps = 15/547 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG     GFT+ + + N ++ MY K G F   L +F+ + + ++VSW  I+S    
Sbjct: 95  GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N    + L   V MK+ G + + F   + +  CV       G  +    +K  +E +  V
Sbjct: 155 N---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEG 241
           G S +  Y++ G    A RVF  +S  D+  WN+++ G +  G +GFEA+ +   M+ EG
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 271

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  +F + +  C    D  + RQIHGL I+   E  + + N L+  Y K   ++   
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 331

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF +M++++V+SW T+      + N     S+F      G  PN VTF  L+       
Sbjct: 332 SVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  GL++  L +  GF+ E +V +S I ++ +  A+E A   F++++++ I +WN ++S
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM-VGQ-IHGAIIKTGF 479
           G+  N    + LK F +     +  N  TF  V+     +E+  +  GQ  H  ++K G 
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +SC  + S+L+  Y   G +D S +  N   + +   W +++SA    G     + +FH 
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKC 597
           +++    PD     ++L +C   G   +   I   +I++ +N E      S ++D   + 
Sbjct: 566 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVDMLGRA 624

Query: 598 GDIKGAR 604
           G +K A 
Sbjct: 625 GRLKEAE 631



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 199/421 (47%), Gaps = 9/421 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    + +LS     +  +LG Q+   +VK G  +D+ + N+ I MYS+ G F    RVF
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           DEM+ ++++SW  ++S   Q G F    + ++ DM   G   +  +  SV+  C      
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           +    IH   +K   E    VG  +++ Y+K G + A + VF+ +S  +V  W  MI   
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                  +A+++  +M F+G+  ++ TF+  +           G +IHGL I++      
Sbjct: 353 KD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           S+ N+ I +Y K   ++ A K FE +  +++ISWN +  GF++N    +   +F     +
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAA 466

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA--LHCGFLDEENVTSSLIYMFCRCGAVE 399
            + PN  TF  +L       D+ +    +C A  L  G      V+S+L+ M+ + G ++
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            +  VF+ +S KN   W  ++S Y  +     V+  F  + +  V  +  TF  V+  C 
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586

Query: 460 R 460
           R
Sbjct: 587 R 587



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 17/273 (6%)

Query: 400 MAHSVFDNVSYKNITT-WNELLSGYCFNCCDADVLKTFCNIWESGV------EVNGCTFF 452
           +AH +FD  S +N TT  N  +S        A  L  F    + G       EV  C   
Sbjct: 26  IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC--- 82

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            +    CR + ++   QIHG    +GF+S   + ++++  Y   G+ DN+          
Sbjct: 83  -LALKACRGDLKRGC-QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D+ SW  ++S       N  A+     +  AG   D +   T L+ C     +     + 
Sbjct: 141 DVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             V+K G  +++ V ++ I  Y++ G  +GAR  FD+  +  D+I +N+L+   +  G  
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE-MSFKDMISWNSLLSGLSQEGTF 256

Query: 633 S-EAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             EA+ IF  M    ++    +F SV++ C H+
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 163/544 (29%), Positives = 282/544 (51%), Gaps = 1/544 (0%)

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           M+ GYA       AL+  S M  + +    Y F   L+ C   +D   G++IHG +I S 
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
              ++  +  +++MY K   ++ A+ +F+RM ++D++ WNT+  G+++N        L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +    G RP+ +T   +L        L +G+ +    L  GF    NV+++L+ M+ +CG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           +V +A  +FD + ++ + +WN ++ GY  +      +  F  + + GV+    T    + 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C    + +    +H  + +    S   + +SLI  Y    ++D + +         + S
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W AM+      G  +EA+  F  +     KPD + + +++ + A +   ++ K IH  VI
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +   +  V+V +A++D YAKCG I  AR  FD   N+  VI +N +I  Y  HGL   ++
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDM-MNARHVITWNAMIDGYGTHGLGKTSV 419

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E+F +MK   ++P+  TF+  +SACSH GLV++G   F+SM   YG++P+ D YG +VD+
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L R G L  A   I+ MP +P  TVY ++L  C+IH N +LGE A+ ++  L P +   H
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYH 539

Query: 757 VLLS 760
           VLL+
Sbjct: 540 VLLA 543



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 199/400 (49%), Gaps = 2/400 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG ++  GF+ ++F    ++ MY+KC        +FD M ER+LV W  ++S   Q
Sbjct: 49  GKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ 108

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG   + L + + M   G  P+   + S++           G ++H + L+   E    V
Sbjct: 109 NGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNV 168

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y+K G V+ A  +F  +    V  WN+MI GY   G    A+ +   ML EG+
Sbjct: 169 STALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGV 228

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T + AL  C+ + D + G+ +H L+ + +++  +S++N+LI MY K   +D A  
Sbjct: 229 QPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAAD 288

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ + +K ++SWN +  G+++N    +  + F +      +P+  T   ++    +L  
Sbjct: 289 IFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSI 348

Query: 363 LDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
                 +  L +   FLD+   V ++L+ M+ +CGA+  A  +FD ++ +++ TWN ++ 
Sbjct: 349 PRQAKWIHGLVIR-RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMID 407

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           GY  +      ++ F  + +  ++ N  TF   +  C  S
Sbjct: 408 GYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/577 (23%), Positives = 245/577 (42%), Gaps = 19/577 (3%)

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++   D  L  +  MK +   P  +    ++K+C      + G  IH   +      N F
Sbjct: 7   KSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLF 66

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
               V+N YAK   +  A  +F  +   D+ CWN MI GYA  G+   AL +V  M  EG
Sbjct: 67  AMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEG 126

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T ++ L   +      IG  +HG ++R+  E  +++  AL+DMY K   +  A 
Sbjct: 127 HRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIAR 186

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ M  + V+SWN++  G+ ++ +      +F K +  G +P +VT    L  C  L 
Sbjct: 187 VIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL+ G  +  L        + +V +SLI M+ +C  V++A  +F N+  K + +WN ++ 
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMIL 306

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N C  + L  FC +    ++ +  T   V+         +    IHG +I+     
Sbjct: 307 GYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDK 366

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ ++L+  Y   G +  + +  +      + +W AM+      G    +V +F  + 
Sbjct: 367 NVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMK 426

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDI 600
           +   KP++      L++C+  G  +        + K  G    +    A++D   + G +
Sbjct: 427 KGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRL 486

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV----SEAMEIFDKMKLANLQPSQATF-- 654
             A     +      + VY  ++ A   H  V      A EIF       L P    +  
Sbjct: 487 NQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIF------KLNPDDGGYHV 540

Query: 655 --VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
              ++ +  S  G V K     +++  + G+Q +P C
Sbjct: 541 LLANIYATASMWGKVAK----VRTIMEKSGLQKTPGC 573



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 159/320 (49%), Gaps = 6/320 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I +   L    + +   +G  VHG++++ GF + + +   L+ MYSKCG       
Sbjct: 128 RPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARV 187

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD M  R +VSW  ++   +Q+G+ +  + ++  M   G  P    V   +  C  +G 
Sbjct: 188 IFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGD 247

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  +H    +++++ +  V  S+++ Y+K   V  A  +F ++ +  +  WNAMI G
Sbjct: 248 LERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILG 307

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ---IHGLIIRSEV 277
           YA  G   EALN    M    I  D +T ++ +     +A+  I RQ   IHGL+IR  +
Sbjct: 308 YAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPA---LAELSIPRQAKWIHGLVIRRFL 364

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ ++ AL+DMY K   +  A K+F+ M  + VI+WN +  G+  +     +  LF +
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 338 FILSGSRPNHVTFSILLRQC 357
                 +PN +TF   L  C
Sbjct: 425 MKKGTIKPNDITFLCALSAC 444



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 14/141 (9%)

Query: 32  NQFCS--------DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           N FC         DSF     I     LS+    K       +HG +++     ++F+  
Sbjct: 319 NAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAK------WIHGLVIRRFLDKNVFVMT 372

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            L+ MY+KCG      ++FD M  R++++W  ++     +G     ++++ +MK     P
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432

Query: 144 NEFAVGSVMKVCVSMGASEFG 164
           N+      +  C   G  E G
Sbjct: 433 NDITFLCALSACSHSGLVEEG 453


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 189/671 (28%), Positives = 343/671 (51%), Gaps = 18/671 (2%)

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMK 153
           F  GLR+ D +++         +  A  +G +   L++Y +++ +G  + + + + S++K
Sbjct: 6   FQAGLRLSDLISK---------IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILK 56

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C S  +   G ++H   +K   + +  +  S ++FY K GD+ +A+R F S  + D   
Sbjct: 57  AC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVS 115

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN M+ G    G     L       F     +  + +  +Q    +  +  G   HG I 
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIF 175

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTA 332
           RS     +S+ N+L+ +Y +   M +A+K+F  M+ + DV+SW+ + GGF +     Q  
Sbjct: 176 RSGFSAILSVQNSLLSLYAEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGF 234

Query: 333 SLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
            +F   +  +G  P+ VT   +L+ C  L D+ LG  +  L +  G  D+  V +SLI M
Sbjct: 235 LMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDM 294

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C  V  A   F  +  KNI +WN +LS Y  N    + L     +   G E +  T 
Sbjct: 295 YSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL 354

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++      +      +HG II+ G+ S   + +S+I +Y     ++ +    +G  +
Sbjct: 355 ANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNK 414

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ +W  M++     G   EA+++F  + E    P+   +  ++ +CA     +++K  
Sbjct: 415 KDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWA 473

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H   ++ G  +EV + +++ID Y+KCGDI+ +  AF+Q    N V+ ++ +I A+  +GL
Sbjct: 474 HGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKN-VVCWSAMISAFRINGL 532

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F+K+K    +P+  T +S++SACSH GL+++G   F SM  ++G++P  + Y 
Sbjct: 533 AHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYS 592

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           C+VDMLSR G   +A  +IE +P   +   +++ +LLS CR +GN  LG  A+ ++L L 
Sbjct: 593 CIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLE 652

Query: 750 PKNDAAHVLLS 760
           P + A ++L S
Sbjct: 653 PLSSAGYMLAS 663



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 15/550 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LGT +HG ++K G  +   + N+ I  Y K G      R FD    ++ VSW ++V    
Sbjct: 65  LGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNF 124

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG    GL  ++  +   F PN  ++  V++    +     G++ H +  +        
Sbjct: 125 SNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILS 184

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  S+L+ YA++  +  A ++F  +S  +DV  W+ MIGG+   G   +   +  +M+ E
Sbjct: 185 VQNSLLSLYAEV-HMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTE 243

Query: 241 -GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            GI  D  T ++ L+ C+ + D  +G  +HGL+I   +E  + + N+LIDMY K   +  
Sbjct: 244 AGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHS 303

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           AFK F+ + +K++ISWN +   +  N++  +  +L    +  G+  + VT + +L+    
Sbjct: 304 AFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKH 363

Query: 360 LLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
            LD      L+C ++H      G+   E + +S+I  + +C  VE+A  VFD ++ K++ 
Sbjct: 364 FLD-----SLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVV 418

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W+ +++G+  N    + +  F  + E  +  N  +   ++E C  S   +     HG  
Sbjct: 419 AWSTMIAGFARNGKPDEAISVFKQMNEEVIP-NNVSIMNLMEACAVSAELRQSKWAHGIA 477

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           ++ G +S   I +S+I  Y   G ++ S    N   + ++  W AM+SA    G  HEA+
Sbjct: 478 VRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEAL 537

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDA 593
            +F  + + G KP+     ++L++C+  G  +   S     V K G    +   S ++D 
Sbjct: 538 MLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDM 597

Query: 594 YAKCGDIKGA 603
            ++ G    A
Sbjct: 598 LSRAGKFNEA 607



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 154/557 (27%), Positives = 271/557 (48%), Gaps = 47/557 (8%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG-YFGWGLRVFDEMAERN-LVSWT 114
           LK    G   HG+I + GF+  + +QN+L+++Y++   YF +  ++F EM+ RN +VSW+
Sbjct: 161 LKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFAY--KLFGEMSVRNDVVSWS 218

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +++   +Q GE + G  M+ +M T  G  P+   V SV+K C ++     G  +H   + 
Sbjct: 219 VMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIF 278

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +E + FVG S+++ Y+K  +V +A + F  I   ++  WN M+  Y       EAL +
Sbjct: 279 RGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALAL 338

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           + +M+ EG   D+ T  N LQ      D    R +HG+IIR   E +  ++N++ID Y K
Sbjct: 339 LGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAK 398

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            + ++ A  VF+ M  KDV++W+T+  GF+ N  P +  S+F K +     PN+V+   L
Sbjct: 399 CNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVF-KQMNEEVIPNNVSIMNL 457

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           +  C    +L        +A+  G   E  + +S+I M+ +CG +E +   F+ +  KN+
Sbjct: 458 MEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNV 517

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             W+ ++S +  N    + L  F  I ++G + N  T   ++  C            HG 
Sbjct: 518 VCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACS-----------HGG 566

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +I+ G S   +  S + K  +  G                +  +  ++  L   G  +EA
Sbjct: 567 LIEEGLS---FFTSMVQKHGIEPG----------------LEHYSCIVDMLSRAGKFNEA 607

Query: 534 VTIFHSL---VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASA 589
           + +   L   +EAG      I GT+L+SC + G           V++L   ++  Y+ ++
Sbjct: 608 LELIEKLPKEMEAGAS----IWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLAS 663

Query: 590 VIDAYAKCG-DIKGARM 605
             + YA CG  I  A+M
Sbjct: 664 --NLYANCGLMIDSAKM 678



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 187/391 (47%), Gaps = 7/391 (1%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +++ +  D + +   L    NLK   LGT VHG ++  G  +D+F+ N+LI MYSKC   
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNV 301

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               + F E+ E+N++SW L++SA I N      L +   M   G   +E  + +V+++ 
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIA 361

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                S    S+H   ++   E N  +  SV++ YAK   V  A  VF  ++  DV  W+
Sbjct: 362 KHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWS 421

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI G+A  G   EA++V   M  E +  +  + +N ++ C++ A+    +  HG+ +R 
Sbjct: 422 TMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR 480

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +   ++I  ++IDMY K   ++ + + F ++  K+V+ W+ +   F  N    +   LF
Sbjct: 481 GLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLF 540

Query: 336 HKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
            K   +G++PN VT   LL  C  G L++  L      +  H G        S ++ M  
Sbjct: 541 EKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKH-GIEPGLEHYSCIVDMLS 599

Query: 394 RCGAVEMAHSVFDNVSYK---NITTWNELLS 421
           R G    A  + + +  +     + W  LLS
Sbjct: 600 RAGKFNEALELIEKLPKEMEAGASIWGTLLS 630


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 214/748 (28%), Positives = 377/748 (50%), Gaps = 36/748 (4%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLG--TQVHGHIVKLGFTNDIFLQNNLIAMYSKC--GY 94
           F R  P      L   ++    +L    QVHG + K  + ++  + N LI+MY  C  G 
Sbjct: 155 FSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGL 214

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNG----EFDMGLKMYVDMKTNGFMPNEFAVGS 150
                +VFD    R+L++W  ++S   + G     F + + M  D       PNE   GS
Sbjct: 215 PLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGS 274

Query: 151 VMKVCVSMGASEFGYSIHCFA--LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           ++    S+ +   G     FA  LK     + +VG ++++ +A+ G +  A+ +F ++  
Sbjct: 275 LI-TATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKE 333

Query: 209 DDVGCWNAMIGGYA--HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI-- 264
            +    N +I G    HC    EA+ +      +   ++  TF+  L   S VA+F I  
Sbjct: 334 RNAVTLNGLIVGLVKQHCSE--EAVGIFMGTR-DSFVVNTDTFVVLL---SAVAEFSIPE 387

Query: 265 -----GRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
                GR++HG I+R+  ++  I++ N L++MY K   +D A +VF  +  +D +SWNT+
Sbjct: 388 DGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTI 447

Query: 319 FGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
                +N    + A + +  +  G   P++      L  C  L  L  G Q+ C A+  G
Sbjct: 448 ISVLDQN-GFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWG 506

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS-GYCFNCCDADVLKTF 436
              + +V+++L+ M+  CGA   +  +F++++  +I +WN ++      +   A+ ++ F
Sbjct: 507 LDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVF 566

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            N+  SG+  N  TF  ++         ++  Q+H  ++K G      + ++L+  Y   
Sbjct: 567 SNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKS 626

Query: 497 GQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
           G +D+  + FS+ + R D  SW +M+S  ++ GH  E +     ++ + +  D      +
Sbjct: 627 GDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIV 686

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           LN+CA++ A +R   +H F I+    ++V V SA++D Y+KCG I  A   F+ S +  +
Sbjct: 687 LNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFN-SMSQKN 745

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
              +N++I  YA HGL  +A+EIF++M+     P   TFVSV+SACSH GLVD+G   F+
Sbjct: 746 EFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFE 805

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR--IHG 733
            M+  +G+ P  + Y C++D+L R G L   +  I  MP +P+  ++R++L  CR    G
Sbjct: 806 MME-DHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDG 864

Query: 734 NK-ELGEWASEKLLLLLPKNDAAHVLLS 760
           ++ +LG+ AS  LL L P+N   +VL S
Sbjct: 865 DRIDLGKEASRMLLELEPQNPVNYVLAS 892



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 166/701 (23%), Positives = 320/701 (45%), Gaps = 32/701 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  +VK G T+D+FL N+L+ +Y+K        +VFD M ERN VSWT +VS  + +G
Sbjct: 77  RLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSG 136

Query: 125 EFDMGLKMYVDMKTNG---FMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKN 179
             D   +++  M   G     P  F  GSV++ C   G     F   +H    K     N
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASN 196

Query: 180 PFVGCSVLNFYA--KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
             V  ++++ Y    +G    A++VF +    D+  WNA++  YA  GY      +  +M
Sbjct: 197 TTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAM 256

Query: 238 LFEGITMD----KYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           L +   ++    ++TF + +   SL +    +  Q+   +++S     + + +AL+  + 
Sbjct: 257 LHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFA 316

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV---- 348
           +   +D A  +F  + +++ ++ N L  G  +     +   +F      G+R + V    
Sbjct: 317 RHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFM-----GTRDSFVVNTD 371

Query: 349 TFSILLRQCGKLLDLDLGL----QLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHS 403
           TF +LL    +    + GL    ++    L  G +D +  +++ L+ M+ +CGA++ A  
Sbjct: 372 TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASR 431

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF  +  ++  +WN ++S    N      +  +C + +  +  +       + +C     
Sbjct: 432 VFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRL 491

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
                Q+H   +K G      + ++L+K Y + G    S+E  N     D+ SW ++M  
Sbjct: 492 LTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGV 551

Query: 524 LV-HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           +V       E+V +F +++ +G  P++     +L++ + +   +  K +H  V+K G   
Sbjct: 552 MVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIE 611

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +  V +A++  YAK GD+      F       D + +N++I  Y ++G + E M+    M
Sbjct: 612 DNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLM 671

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
             +N      TF  V++AC+    +++G +   +   +  ++        L+DM S+ G 
Sbjct: 672 MHSNQMLDCCTFSIVLNACASVAALERG-MEMHAFGIRSQLESDVVVESALLDMYSKCGR 730

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           ++ A  V   M  Q +   + S++SG   HG   LGE A E
Sbjct: 731 IDYASKVFNSMS-QKNEFSWNSMISGYARHG---LGEKALE 767



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 2/292 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  + +     LS    L    LG QVH  ++K G   D  + N L++ Y+K G    
Sbjct: 572 SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDS 631

Query: 98  GLRVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             ++F  M+  R+ VSW  ++S  I NG     +     M  +  M +      V+  C 
Sbjct: 632 CEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACA 691

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S+ A E G  +H F ++ ++E +  V  ++L+ Y+K G +  A +VF S+S  +   WN+
Sbjct: 692 SVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNS 751

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GYA  G G +AL +   M   G   D  TF++ L  CS     D G     ++    
Sbjct: 752 MISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHG 811

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
           +   I   + +ID+  ++  +    +   RM  K + + W T+     ++K+
Sbjct: 812 ILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKD 863


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 170/557 (30%), Positives = 292/557 (52%), Gaps = 8/557 (1%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +V  WN++I GY   G+  E +N+        + +DK+TF NAL  C    D  +GR IH
Sbjct: 5   NVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIH 64

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            LI  S +   + + N+LIDMY K   +D+A  VFE   + D +SWN+L  G+    +  
Sbjct: 65  ALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSND 124

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLD--LDLGLQLQCLALHCGFLDEENVTSS 387
           +   L  K +  G   N       L+ CG      ++ G  L   A+  G   +  V ++
Sbjct: 125 EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTA 184

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-----VLKTFCNIWES 442
           L+  + + G +E A  +F  +   N+  +N +++G+      AD      +  F  +   
Sbjct: 185 LLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSR 244

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G++ +  TF  +++ C   E  +   QIH  I K    S  +I ++L++ Y   G +++ 
Sbjct: 245 GMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDG 304

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +   +LD+ SW +++   V  G     +T+FH L+ +G KPDE+ +  +L++CA +
Sbjct: 305 LKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANL 364

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            A +  + IH + IK G      + ++ I  YAKCGDI  A M F ++ N  D++ ++ +
Sbjct: 365 AAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNP-DIVSWSVM 423

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I + A HG   EA+++F+ MK + + P+  TF+ V+ ACSH GLV++G   F+ M   +G
Sbjct: 424 ISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHG 483

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           + P+     C+VD+L R G L +A+  I    F+  P ++RSLLS CR+H   + G+  +
Sbjct: 484 ITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVA 543

Query: 743 EKLLLLLPKNDAAHVLL 759
           E+++ L P+  A++VLL
Sbjct: 544 ERVIELEPEAAASYVLL 560



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 220/449 (48%), Gaps = 18/449 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR D    + +LS+        LG  +H  I   G    + L N+LI MY KCG   W
Sbjct: 35  SDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDW 94

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+   E + VSW  +++  ++ G  D  L++ V M  +G   N +A+GS +K C S
Sbjct: 95  ARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGS 154

Query: 158 MGAS--EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +S  E G  +H  A+K+ ++ +  VG ++L+ YAK+GD+  A ++F  +   +V  +N
Sbjct: 155 NFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYN 214

Query: 216 AMIGGYAHCG-----YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           AMI G+         +  EA+ +   M   G+   ++TF + L+ CS +  F+ G+QIH 
Sbjct: 215 AMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHA 274

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I +  ++    I NAL+++Y  S  ++   K F      DV+SW +L  G  +N     
Sbjct: 275 QIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEG 334

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +LFH+ + SG +P+  T SI+L  C  L  +  G Q+   A+  G  +   + +S I 
Sbjct: 335 GLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQIC 394

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG ++ A+  F      +I +W+ ++S    + C  + +  F  +  SG+  N  T
Sbjct: 395 MYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHIT 454

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           F  V+  C            HG +++ G 
Sbjct: 455 FLGVLVACS-----------HGGLVEEGL 472



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/557 (22%), Positives = 241/557 (43%), Gaps = 10/557 (1%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +RN+VSW  ++S   Q G +   + ++ + + +    ++F   + + VC        G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH       +     +  S+++ Y K G +  A  VF S    D   WN++I GY   
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEVECSIS 282
           G   E L ++  ML  G+ ++ Y   +AL+ C  +  +  + G+ +HG  ++  ++  + 
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE-----NKNPGQTASLFHK 337
           +  AL+D Y K   ++ A K+F+ M D +V+ +N +  GF +     ++   +   LF +
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +P+  TFS +L+ C  +   + G Q+           +E + ++L+ ++   G+
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E     F +    ++ +W  L+ G+  N      L  F  +  SG + +  T   ++  
Sbjct: 301 IEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSA 360

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C      +   QIH   IKTG  +   I +S I  Y   G +D++       +  D+ SW
Sbjct: 361 CANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSW 420

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
             M+S+    G   EAV +F  +  +G  P+      +L +C+  G  +        + K
Sbjct: 421 SVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKK 480

Query: 578 -LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G    V  ++ ++D   + G +  A      S    D +++ +L+ A   H       
Sbjct: 481 DHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540

Query: 637 EIFDKMKLANLQPSQAT 653
            + +  ++  L+P  A 
Sbjct: 541 RVAE--RVIELEPEAAA 555



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 182/371 (49%), Gaps = 8/371 (2%)

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M  ++V+SWN+L  G+++     +  +LF +  +S  R +  TFS  L  CG+ LDL LG
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
             +  L    G      +T+SLI M+C+CG ++ A  VF++    +  +WN L++GY   
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR--SENQQMVGQIHGAIIKTGFSSCGY 484
             + ++L+    +   G+ +N       ++ C    S + +    +HG  +K G      
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH-----QGHNHEAVTIFHS 539
           + ++L+ +Y   G L+++ +        ++  + AM++  +          +EA+ +F  
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFE 240

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +   G KP E+   +IL +C+ I A++  K IH  + K    ++ ++ +A+++ Y+  G 
Sbjct: 241 MQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGS 300

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I+     F  S    DV+ + +LI+ +  +G     + +F ++  +  +P + T   ++S
Sbjct: 301 IEDGLKCF-HSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359

Query: 660 ACSHKGLVDKG 670
           AC++   V  G
Sbjct: 360 ACANLAAVKSG 370


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 179/572 (31%), Positives = 293/572 (51%), Gaps = 6/572 (1%)

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTF 249
           + LG +  A  +F S+   DV  +N ++ G++       +L V + +     +  +  T+
Sbjct: 63  SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTY 122

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             A+   S   D   G  IHG  I    +  + + + ++ MY K   ++ A KVF+RM +
Sbjct: 123 AFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           KD I WNT+  G+ +N+   ++  +F   I  S +R +  T   +L    +L +L LG+Q
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  LA   G    + V +  I ++ +CG ++MA ++F      +I  +N ++ GY  N  
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGE 302

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L  F  +  SG ++   T   +V     S +  ++  IHG  +K+ F S   + ++
Sbjct: 303 TELSLSLFKELMLSGAKLKSSTLVSLVPV---SGHLMLIYAIHGYSLKSNFLSHTSVSTA 359

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L   Y    +++++ +  + +    + SW AM+S     G   +A+++F  +  +   P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPN 419

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
              +  IL++CA +GA    K +H  V    F + +YV++A+I  YAKCG I  AR  FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                N+V  +NT+I  Y  HG   EA+ IF +M  + + P+  TF+ V+ ACSH GLV 
Sbjct: 480 FMPKKNEV-TWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVK 538

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G  +F SM  +YG +PS   Y C+VD+L R G+L+ A   IE MP QP P+V+ +LL  
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGA 598

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CRIH +  L    SEKL  L P N   HVLLS
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/598 (22%), Positives = 247/598 (41%), Gaps = 8/598 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H  IV  GF NDI L   L    S  G   +   +F  +   ++  + +++     N 
Sbjct: 38  QTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                L ++  + K+    PN       +           G  IH  A+    +    +G
Sbjct: 98  SPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLG 157

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K   V  A +VF  +   D   WN MI GY       E++ V   ++ E  T
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 244 -MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T ++ L   + + +  +G QIH L  ++       ++   I +Y K   +  A  
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F      D++++N +  G++ N     + SLF + +LSG++    T   L+   G L+ 
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM- 336

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             L   +   +L   FL   +V+++L  ++ +   +E A  +FD    K++ +WN ++SG
Sbjct: 337 --LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    D +  F  +  S    N  T   ++  C +     +   +H  +  T F S 
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ ++LI  Y   G +  +    +   + +  +W  M+S     GH  EA+TIF  ++ 
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN 514

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +G  P       +L +C+  G  +    I +  + + GF   V   + V+D   + G ++
Sbjct: 515 SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQ 574

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            A    +         V+ TL+ A   H   + A  + +  KL  L P    +  ++S
Sbjct: 575 RALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSE--KLFELDPDNVGYHVLLS 630



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 195/440 (44%), Gaps = 15/440 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ +    A ++S +   +    G  +HG  +  G  +++ L +N++ MY K        
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDAR 174

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSM 158
           +VFD M E++ + W  ++S   +N  +   ++++ D+        +   +  ++     +
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  IH  A K     + +V    ++ Y+K G +  A  +F      D+  +NAMI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMI 294

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G    +L++   ++  G  +   T ++ +    +     +   IHG  ++S   
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLV---PVSGHLMLIYAIHGYSLKSNFL 351

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              S+  AL  +Y K + ++ A K+F+   +K + SWN +  G+++N       SLF + 
Sbjct: 352 SHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S   PN VT + +L  C +L  L LG  +  L     F     V+++LI M+ +CG++
Sbjct: 412 QNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  +FD +  KN  TWN ++SGY  +    + L  F  +  SG+     TF  V+  C
Sbjct: 472 AEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYAC 531

Query: 459 CRSENQQMVGQIHGAIIKTG 478
                       H  ++K G
Sbjct: 532 S-----------HAGLVKEG 540



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 183/403 (45%), Gaps = 4/403 (0%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
             ++S  R D   L   L     L+   LG Q+H    K G  +  ++    I++YSKCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                  +F E    ++V++  ++     NGE ++ L ++ ++  +G       + S++ 
Sbjct: 271 KIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVP 330

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
           V    G     Y+IH ++LK     +  V  ++   Y+KL ++ +A ++F       +  
Sbjct: 331 VS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WNAMI GY   G   +A+++   M     + +  T    L  C+ +    +G+ +H L+ 
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            ++ E SI +  ALI MY K   +  A ++F+ M  K+ ++WNT+  G+  + +  +  +
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALT 507

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMF 392
           +F + + SG  P  VTF  +L  C     +  G ++    +H  GF       + ++ + 
Sbjct: 508 IFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDIL 567

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            R G ++ A    + +  +   +  E L G C    D ++ +T
Sbjct: 568 GRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLART 610



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/290 (18%), Positives = 125/290 (43%), Gaps = 5/290 (1%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           RS +   + Q H  I+  GF +   + + L +   + G +  + +     +R D+  +  
Sbjct: 29  RSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +M         H ++ +F  L ++ + KP+       +++ +     +    IH   I  
Sbjct: 89  LMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVD 148

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G ++E+ + S ++  Y K   ++ AR  FD+     D I++NT+I  Y  + +  E++++
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDR-MPEKDTILWNTMISGYRKNEMYVESIQV 207

Query: 639 F-DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           F D +  +  +    T + ++ A +    +  G +   S+ ++ G           + + 
Sbjct: 208 FRDLINESCTRLDTTTLLDILPAVAELQELRLG-MQIHSLATKTGCYSHDYVLTGFISLY 266

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           S+ G ++ A  +      +P    Y +++ G   +G  EL     ++L+L
Sbjct: 267 SKCGKIKMASTLFREFR-RPDIVAYNAMIHGYTSNGETELSLSLFKELML 315


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 196/711 (27%), Positives = 340/711 (47%), Gaps = 23/711 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG I++ G     FL   L+AMY KCG       VF  + ++++V+WT ++    +
Sbjct: 59  GRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQGIQDKSVVAWTSLIGVNAR 118

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK---- 178
           +G       ++ +M+  G MPN+    +V+  C        G+      ++ R+E     
Sbjct: 119 SGHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC--------GHPWEVDTIRARVEACGSL 170

Query: 179 --NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  +V+N Y K GD+ +A  VF  I   D   WNAMI        G EAL +   
Sbjct: 171 ELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAHEQGDEALELFRQ 230

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M   G+T +K T + AL  C    DF    +IH        +    +  AL++MY K   
Sbjct: 231 MRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGK 290

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +D A ++FER+ ++DV+SWN +    + N    +    F + +L G  P+ +T+  +L  
Sbjct: 291 VDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNA 350

Query: 357 CGKLLDLDLGLQLQCLALH--CGFLDEENVT-SSLIYMFCRCGAVEMAHS----VFDNVS 409
           C     L  G  ++ LA+   CG    + V  ++++ M+ RC + + A S    +  +  
Sbjct: 351 CFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRD 410

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             +I  WN +LS Y  N    +    F  +   GV ++  +   V   C  S + +    
Sbjct: 411 QPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKW 470

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH  + ++  +    + ++L+  Y   G L+++ E  +     ++ SW AM+      G 
Sbjct: 471 IHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGL 530

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           N EA+ IF S++  G  P+E     +LN+C  + +    K +   + + GF   V VA+ 
Sbjct: 531 NREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANG 590

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++    KCG ++     F Q     + + +NT I A A HG     +E+F  M+L  +  
Sbjct: 591 LLCTLGKCGSLEEV-ANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDT 649

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              T + V+S+CSH GLV +G   F +M   YG     + Y C++D+LSR G+LE A+  
Sbjct: 650 GSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEF 709

Query: 710 IEIMPF-QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           ++ +PF   S   + +LL GC++HG+ E G  A++++L L P +   ++++
Sbjct: 710 VKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVM 760



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 226/482 (46%), Gaps = 11/482 (2%)

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
           F+  + D  TF   +  C+ + D   GR+IHGLI+R+ +E    +   L+ MY K    +
Sbjct: 33  FDDGSADASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPE 92

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  VF+ + DK V++W +L G  + + +P +   LF +  L G  PN VT+  +L  CG
Sbjct: 93  EARAVFQGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACG 152

Query: 359 KLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
              ++D    ++     CG L+ +  V ++++  + +CG ++ A  VFD +  ++   WN
Sbjct: 153 HPWEVD---TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWN 209

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++S    +    + L+ F  +   GV  N  T    +  CC S +     +IH    + 
Sbjct: 210 AMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFAREL 269

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
              +   + ++L+  Y  FG++D++ E     +  D+ SW AM++A    G + +A   F
Sbjct: 270 AGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCF 329

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE---VYVASAVIDAY 594
             ++  GE P       ILN+C      +    +    ++ G   E   V + +A+++ Y
Sbjct: 330 REMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY 389

Query: 595 AKCGDIKGA---RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           ++C   K A    +  +Q  +   ++++NT++  Y  +    EA  IF  M L  +    
Sbjct: 390 SRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDT 449

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            + ++V +AC     ++KG  +   +      + +P     LV M +R G LEDA+ + +
Sbjct: 450 VSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTP-VQNALVTMYARLGSLEDAREIFD 508

Query: 712 IM 713
            M
Sbjct: 509 AM 510



 Score = 46.6 bits (109), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 47/111 (42%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL S      V   + + GF  ++ + N L+    KCG        F  MA +N VSW  
Sbjct: 562 NLASIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNT 621

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++A  Q+G    G++++  M+  G       +  V+  C   G    GYS
Sbjct: 622 AIAANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYS 672


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 206/720 (28%), Positives = 345/720 (47%), Gaps = 7/720 (0%)

Query: 46  FLAKSLSLSENLKSRVL---GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           F+  SL  + N KS ++   G Q HG  +K G   D+F+  + +  Y+  G      ++F
Sbjct: 59  FMIASLVTACN-KSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMF 117

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +EM +RN+VSWT ++ +   NG     +  Y  M+  G   NE  +  V+  C  +    
Sbjct: 118 NEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDII 177

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G+ +   ALK  +E       S++  +   GD+  A  +F  ++  D   WN++I   A
Sbjct: 178 LGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANA 237

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 E+      M      ++  T    L  C  V     G+ +HGL ++  +E +I 
Sbjct: 238 QNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNIC 297

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N L+ +Y  +     A  +F RM ++D+ISWN++   + ++        +F + +   
Sbjct: 298 LCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMK 357

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              N+VTF+  L  C        G  L    +  G  DE  + ++LI  + +C  +  A 
Sbjct: 358 KEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAK 417

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE-VNGCTFFYVVETCCRS 461
            VF  +   +  TWN L+ G+  N    + +  F  + E     V+  T   ++ +C   
Sbjct: 418 KVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTH 477

Query: 462 ENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           E+    G  IH   + TGF    ++ SSLI  Y   G L +S    +       + W A+
Sbjct: 478 EDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAI 537

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++A    G   EA+ +   +  AG + D++   T L+  A +   +  + +H   IKLGF
Sbjct: 538 IAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGF 597

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             + ++ +A +D Y KCG++  A     Q  + +  + +NTLI   A HG   +A E F 
Sbjct: 598 ELDHFIINAAMDMYGKCGELDDALRILPQPTDRSR-LSWNTLISISARHGQFHKAKETFH 656

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M    ++P+  +FV ++SACSH GLVD+G   + SM S YG+QP  +   C++D+L R+
Sbjct: 657 DMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRS 716

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L +A+  I  MP  P+  V+RSLL+ CRI+ N +LG  A++ LL L P +D+A+VL S
Sbjct: 717 GRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYS 776



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 172/652 (26%), Positives = 306/652 (46%), Gaps = 10/652 (1%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MYSK G   +   VFD M+ERN  SW  ++S  ++ G +   +  + D+   G  P+ F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 148 VGSVMKVC--VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
           + S++  C   S+ A E G+  H FA+K  +  + FVG S ++FYA  G V+ A+++F  
Sbjct: 61  IASLVTACNKSSIMAKE-GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNE 119

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   +V  W +++  Y+  G   E +N    M  EGI  ++      +  C  + D  +G
Sbjct: 120 MPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILG 179

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            Q+ G  ++  +E  +S  N+LI M+     ++ A  +F  M ++D ISWN++    ++N
Sbjct: 180 HQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN 239

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               ++   FH   L     N+ T SILL  CG +  L  G  +  LA+  G      + 
Sbjct: 240 TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLC 299

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++L+ ++   G  + A  +F  +  +++ +WN +L+ Y  +      LK F  +     E
Sbjct: 300 NTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKE 359

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           +N  TF   +  C   E       +HG ++  G      I ++LI  Y    ++  + + 
Sbjct: 360 INYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKV 419

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI-LGTILNSCAA-IG 563
                +LD  +W A++    +    +EAV  F  + E      +YI +  IL SC     
Sbjct: 420 FQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHED 479

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTL 622
             +    IH   +  GF+ + +V S++I  YAKCGD+  +   FDQ  F ++   V+N +
Sbjct: 480 LIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSS--VWNAI 537

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I A A +G   EA+++  +M+ A ++  Q  F + +S  +   ++++G  L  S   + G
Sbjct: 538 IAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGST-IKLG 596

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            +         +DM  + G L+DA  ++   P   S   + +L+S    HG 
Sbjct: 597 FELDHFIINAAMDMYGKCGELDDALRILP-QPTDRSRLSWNTLISISARHGQ 647



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 62/122 (50%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    + +LS++ +L     G Q+HG  +KLGF  D F+ N  + MY KCG     LR+ 
Sbjct: 565 DQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRIL 624

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            +  +R+ +SW  ++S + ++G+F    + + DM   G  PN  +   ++  C   G  +
Sbjct: 625 PQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVD 684

Query: 163 FG 164
            G
Sbjct: 685 EG 686


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  300 bits (767), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/607 (30%), Positives = 311/607 (51%), Gaps = 13/607 (2%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  IH F+          V  +V+  Y K G    A  +F ++   DV  WN ++ G+  
Sbjct: 20  GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 79

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 ALN V  M   G+  D +T+  AL  C     F +G Q+   ++++ +E  + +
Sbjct: 80  NQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 136

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASLFHKFILSG 342
            N+ I MY +S     A +VF+ M+ KD+ISWN+L  G S+    G +   +F   +  G
Sbjct: 137 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 196

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              +HV+F+ ++  C    DL L  Q+  L +  G+     V + L+  + +CG +E   
Sbjct: 197 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 256

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           SVF  +S +N+ +W  ++S         D +  F N+   GV  N  TF  ++     +E
Sbjct: 257 SVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 311

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             +   +IHG  IKTGF S   + +S I  Y  F  L+++ +        ++ SW AM+S
Sbjct: 312 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 371

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--AYQRTKSIHPFVIKLGF 580
                G +HEA+ +F S   A   P+EY  G++LN+ A     + ++ +  H  ++KLG 
Sbjct: 372 GFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 430

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           N+   V+SA++D YAK G+I  +   F++    N   V+ ++I AY+ HG     M +F 
Sbjct: 431 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ-FVWTSIISAYSSHGDFETVMNLFH 489

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM   N+ P   TF+SV++AC+ KG+VDKG  +F  M   Y ++PS + Y C+VDML R 
Sbjct: 490 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 549

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L++A+ ++  +P  P  ++ +S+L  CR+HGN ++G   +E  + + P+   ++V + 
Sbjct: 550 GRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMY 609

Query: 761 KRKRQRE 767
               ++E
Sbjct: 610 NIYAEKE 616



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 264/547 (48%), Gaps = 15/547 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG     GFT+ + + N ++ MY K G F   L +F+ + + ++VSW  I+S    
Sbjct: 20  GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 79

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N    + L   V MK+ G + + F   + +  CV       G  +    +K  +E +  V
Sbjct: 80  N---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 136

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEG 241
           G S +  Y++ G    A RVF  +S  D+  WN+++ G +  G +GFEA+ +   M+ EG
Sbjct: 137 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 196

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  +F + +  C    D  + RQIHGL I+   E  + + N L+  Y K   ++   
Sbjct: 197 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 256

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF +M++++V+SW T+      + N     S+F      G  PN VTF  L+       
Sbjct: 257 SVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 311

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  GL++  L +  GF+ E +V +S I ++ +  A+E A   F++++++ I +WN ++S
Sbjct: 312 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 371

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM-VGQ-IHGAIIKTGF 479
           G+  N    + LK F +     +  N  TF  V+     +E+  +  GQ  H  ++K G 
Sbjct: 372 GFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 430

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +SC  + S+L+  Y   G +D S +  N   + +   W +++SA    G     + +FH 
Sbjct: 431 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 490

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKC 597
           +++    PD     ++L +C   G   +   I   +I++ +N E      S ++D   + 
Sbjct: 491 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVDMLGRA 549

Query: 598 GDIKGAR 604
           G +K A 
Sbjct: 550 GRLKEAE 556



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 199/421 (47%), Gaps = 9/421 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    + +LS     +  +LG Q+   +VK G  +D+ + N+ I MYS+ G F    RVF
Sbjct: 98  DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 157

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           DEM+ ++++SW  ++S   Q G F    + ++ DM   G   +  +  SV+  C      
Sbjct: 158 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 217

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           +    IH   +K   E    VG  +++ Y+K G + A + VF+ +S  +V  W  MI   
Sbjct: 218 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 277

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                  +A+++  +M F+G+  ++ TF+  +           G +IHGL I++      
Sbjct: 278 KD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 332

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           S+ N+ I +Y K   ++ A K FE +  +++ISWN +  GF++N    +   +F     +
Sbjct: 333 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAA 391

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA--LHCGFLDEENVTSSLIYMFCRCGAVE 399
            + PN  TF  +L       D+ +    +C A  L  G      V+S+L+ M+ + G ++
Sbjct: 392 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 451

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            +  VF+ +S KN   W  ++S Y  +     V+  F  + +  V  +  TF  V+  C 
Sbjct: 452 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 511

Query: 460 R 460
           R
Sbjct: 512 R 512


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 195/658 (29%), Positives = 334/658 (50%), Gaps = 9/658 (1%)

Query: 109 NLVSWTLIVSAAIQNGEFDM--GLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGY 165
            L +W L +  +     +D       Y  MK  G  + +   V S++K C S+     G 
Sbjct: 11  KLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPV-RHGK 69

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           SIH   LK   +     G SVL+FY K G + +A  VF S+ S D   WN MI G+   G
Sbjct: 70  SIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRG 129

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              + L             +  T + A+  C  +   + G ++HG IIRS      S+ N
Sbjct: 130 ASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQN 189

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-R 344
           +L+ MY  +  M+ A ++F+ M ++DVISW+ + GG+ +         LF +   + S  
Sbjct: 190 SLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIE 248

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + +T   +L+ C    D+ +G  +  + +  G   +  V +S+I M+ +C   E A   
Sbjct: 249 LDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKA 308

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  +N  +WN ++SG       ++ L  F ++ ++G   +  T   ++++C    + 
Sbjct: 309 FNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDP 368

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                IH  +I+ G+    ++ +SLI +Y     ++ +++  +  +  D  SW AM++  
Sbjct: 369 FQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF 428

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
            H G   EA+ +F  + +A EKP+   + ++L + +     +R+K  H   I+ G   EV
Sbjct: 429 NHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEV 488

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V +A++D YAKCG+I  +R AFDQ    N ++ +  +I A   +GL  +A+ +  +MKL
Sbjct: 489 AVGTAILDMYAKCGEIGLSRKAFDQIPEKN-IVSWGAMIAACGMNGLARDALALLSEMKL 547

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             L+P+  T +SV+SACSH GLV++G   F++M   +G++P  + Y C+VDMLSR G L 
Sbjct: 548 HGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLN 607

Query: 705 DAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            A ++IE MP   +    ++ +LLS CR  GN  LG  A+ ++L L P++ A + L S
Sbjct: 608 SAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLAS 665



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 268/570 (47%), Gaps = 18/570 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP  +   L    +L  R  G  +H  ++K GF +     N+++  Y K G     L VF
Sbjct: 49  DPTLVHSILKACSSLPVR-HGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVF 107

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M  R+ VSW +++   +  G  D GL  +   +   F PN   +   +  C S+GA E
Sbjct: 108 DSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAME 167

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H + ++      P V  S+L+ YA   D+  AE +F  +   DV  W+ MIGGY 
Sbjct: 168 EGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYV 226

Query: 223 HCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             G    AL +   M     I +D  T ++ L+ C+   D  +GR +HG++I   ++  +
Sbjct: 227 QTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDL 286

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + N++IDMY K    + AFK F  M  ++ +SWN++  G    +   +  SLF+    +
Sbjct: 287 FVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKA 346

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCG 396
           G R + VT   LL+ C   +D       QC  +H      G+   E V +SLI  + +C 
Sbjct: 347 GFRADEVTLVNLLQSCKYFVD-----PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCD 401

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA--DVLKTFCNIWESGVEVNGCTFFYV 454
            +E+A  +FD +  K+  +W+ +++G  FN C    + +  F  + ++  + NG T   +
Sbjct: 402 LIELAWKLFDRLKTKDTVSWSAMIAG--FNHCGKPDEAIALFQEMNQAQEKPNGVTILSL 459

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +E    S + +     HG  I+ G ++   + ++++  Y   G++  S +  +     ++
Sbjct: 460 LEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNI 519

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SWGAM++A    G   +A+ +   +   G KP+     ++L++C+  G  +   S    
Sbjct: 520 VSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 575 VIK-LGFNTEVYVASAVIDAYAKCGDIKGA 603
           +++  G    +   S ++D  ++ G +  A
Sbjct: 580 MVQDHGVEPGLEHYSCMVDMLSRAGKLNSA 609



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 183/398 (45%), Gaps = 12/398 (3%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +  S++ +  D I +   L    N     +G  VHG ++  G   D+F+ N++I MYSKC
Sbjct: 240 EMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKC 299

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                  + F+EM  RN VSW  I+S  ++  +    L ++  M   GF  +E  + +++
Sbjct: 300 DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL 359

Query: 153 KVC---VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           + C   V     +F   IH   ++   E N FV  S+++ Y+K   +  A ++F  + + 
Sbjct: 360 QSCKYFVDPFQCKF---IHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTK 416

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D   W+AMI G+ HCG   EA+ +   M       +  T ++ L+  S+ AD    +  H
Sbjct: 417 DTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAH 476

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G+ IR  +   +++  A++DMY K   +  + K F+++ +K+++SW  +      N    
Sbjct: 477 GIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLAR 536

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
              +L  +  L G +PN VT   +L  C  G L++  L      +  H G        S 
Sbjct: 537 DALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDH-GVEPGLEHYSC 595

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYK---NITTWNELLSG 422
           ++ M  R G +  A ++ + +  +       W  LLS 
Sbjct: 596 MVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSA 633


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 170/592 (28%), Positives = 310/592 (52%), Gaps = 13/592 (2%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----GYGFEALNVVS 235
           F+  ++L  Y+K G +++A +VF +    D+  WNA++G YA       G   E L++  
Sbjct: 113 FLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFR 172

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +     +  + T    L+ C           +HG  I+  +E  + +  AL+++Y K  
Sbjct: 173 LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG 232

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            M  A  +F+ M ++DV+ WN +  G+ +     +   LF +F  SG RP+  +  ++L 
Sbjct: 233 RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292

Query: 356 QC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            C      DL+LG Q+  +A+  G   + +V +SL+ M+ + G    A  VF+++ + ++
Sbjct: 293 GCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 352

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV-----G 468
            +WN ++S    +  + + +  F ++   G++ +  T   +           +V      
Sbjct: 353 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGK 412

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           QIH   IK GF S  ++ S ++  Y+  G + N+    N     D  +W +M+S  V  G
Sbjct: 413 QIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNG 472

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           +  +A+ I+H + ++   PDEY   T++ + + + A ++ + +H  VIKL   ++ +V +
Sbjct: 473 NEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT 532

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           +++D YAKCG+I+ A   F +  N  ++ ++N +++  A HG   EA+ +F  MK   ++
Sbjct: 533 SLVDMYAKCGNIEDAYRLF-KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIE 591

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P + +F+ ++SACSH GL  +      SM + YG++P  + Y CLVD L R G +++A  
Sbjct: 592 PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 651

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           VIE MPF+ S ++ R+LL  CRI G+ E G+  + +L  L P + AA+VLLS
Sbjct: 652 VIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLS 703



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 154/556 (27%), Positives = 275/556 (49%), Gaps = 13/556 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG   H  IV  G   D FL NNL+ MYSKCG      +VFD   ER+LV+W  I+ A 
Sbjct: 94  LLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAY 153

Query: 121 I-----QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
                  +G    GL ++  ++ +        +  V+K+C++ G       +H +A+KI 
Sbjct: 154 AASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 213

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E + FV  +++N Y+K G +  A  +F  +   DV  WN M+ GY   G   EA  + S
Sbjct: 214 LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 273

Query: 236 SMLFEGITMDKYTFINALQGCSLVA--DFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
                G+  D+++    L GC      D ++G+Q+HG+ ++S ++  +S+ N+L++MY K
Sbjct: 274 EFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSK 333

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH-----V 348
                +A +VF  M   D+ISWN++    +++    ++ +LF   +  G +P+H     +
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T +   + CG L+ LD G Q+   A+  GF  + +V S ++ M+ +CG +  A  VF+ +
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYI 453

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           S  +   W  ++SG   N  +   L+ +  + +S V  +  TF  +++        +   
Sbjct: 454 SAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGR 513

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q+H  +IK    S  ++ +SL+  Y   G +++++         ++A W AM+  L   G
Sbjct: 514 QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHG 573

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVA 587
           +  EAV +F S+   G +PD      IL++C+  G   +  + +H      G   E+   
Sbjct: 574 NAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHY 633

Query: 588 SAVIDAYAKCGDIKGA 603
           S ++DA  + G ++ A
Sbjct: 634 SCLVDALGRAGLVQEA 649



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 178/369 (48%), Gaps = 6/369 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG  VK G  +D+ + N+L+ MYSK G   +   VF++M   +L+SW  ++S+  
Sbjct: 304 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM-----KVCVSMGASEFGYSIHCFALKIRI 176
           Q+   +  + +++D+   G  P+ F + S+      K C  +   + G  IH  A+K   
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + +  V   +L+ Y K GD+  A  VF  IS+ D   W +MI G    G   +AL +   
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M    +  D+YTF   ++  S V   + GRQ+H  +I+ +      +  +L+DMY K   
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A+++F++M  +++  WN +  G +++ N  +  +LF      G  P+ V+F  +L  
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 603

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C    L  +    L  +    G   E    S L+    R G V+ A  V + + +K   +
Sbjct: 604 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASAS 663

Query: 416 WNELLSGYC 424
            N  L G C
Sbjct: 664 INRALLGAC 672


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 314/602 (52%), Gaps = 10/602 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   LK  +  + F+   +   YA+   +  A ++F       V  WNA++  Y   G 
Sbjct: 158 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 217

Query: 227 GFEAL------NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
             E L      N VSS+  E    D Y+   AL+ C+ +    +G+ IHG + +  ++  
Sbjct: 218 WVETLSLFRQMNNVSSVSIEE-RPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGD 276

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + +ALID+Y K   M+ A KVF      DV+ W ++  G+ ++ +P    + F + ++
Sbjct: 277 MFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVV 336

Query: 341 SGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           S    P+ VT   +   C +L +  LG  +       G  ++  + +SL++++ + G+++
Sbjct: 337 SEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIK 396

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A ++F  +S K+I +W+ +++ Y  N  + DVL  F  + +  ++ N  T   V+  C 
Sbjct: 397 NASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACA 456

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
              N +   +IH   +  GF     + ++L+  Y+     + + +  N   + D+ +W  
Sbjct: 457 CISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAV 516

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           + S     G  HE++ +F +++ +G +PD   L  IL + + +G  Q+   +H FVIK G
Sbjct: 517 LFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNG 576

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F    ++ +++I+ YAKC  I+ A   F +     DV+ ++++I AY  HG   EA+++F
Sbjct: 577 FENNQFIGASLIEVYAKCSSIEDANKVF-KGMTYKDVVTWSSIIAAYGFHGQGEEALKLF 635

Query: 640 DKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
            +M   ++ +P+  TF+S++SACSH GL+ +G  +F  M ++Y ++P+ + Y  +VD+L 
Sbjct: 636 YQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLG 695

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L+ A  VI  MP Q  P ++ +LL  CRIH N ++GE A++ L  L P +   ++L
Sbjct: 696 RMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYIL 755

Query: 759 LS 760
           LS
Sbjct: 756 LS 757



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 278/560 (49%), Gaps = 15/560 (2%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S++  +Q+H   +K G  +D F+   L  +Y++        ++F E   R +  W  ++ 
Sbjct: 151 SKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLR 210

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFM-----PNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +    GE+   L ++  M     +     P+ ++V   +K C  +     G  IH F  K
Sbjct: 211 SYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKK 270

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           +RI+ + FVG ++++ Y K G +  A +VF      DV  W ++I GY   G    AL  
Sbjct: 271 VRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAF 330

Query: 234 VSSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
            S M+  E ++ D  T ++    C+ +++F +GR +HG + R  ++  + + N+L+ +Y 
Sbjct: 331 FSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYG 390

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K+  +  A  +F  M+DKD+ISW+T+   +++N        LF++ +    +PN VT   
Sbjct: 391 KTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVS 450

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +LR C  + +L+ G+++  LA++ GF  E  V+++L+ M+ +C + E A  +F+ +  K+
Sbjct: 451 VLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKD 510

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +  W  L SGY  N    + +  F N+  SG   +      ++ T       Q    +H 
Sbjct: 511 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHA 570

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +IK GF +  +I +SLI+ Y     ++++ +   G    D+ +W ++++A    G   E
Sbjct: 571 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 630

Query: 533 AVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVAS 588
           A+ +F+ +    + KP+     +IL++C+  G  +   ++   ++   KL  N+E Y  +
Sbjct: 631 ALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHY--A 688

Query: 589 AVIDAYAKCGDIKGARMAFD 608
            ++D   + G++    MA D
Sbjct: 689 IMVDLLGRMGELD---MALD 705



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 218/423 (51%), Gaps = 2/423 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   ++ +L     L+  +LG  +HG + K+    D+F+ + LI +Y+KCG     ++
Sbjct: 239 RPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVK 298

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMG 159
           VF E  + ++V WT I+S   Q+G  ++ L  +  M  +    P+   + SV   C  + 
Sbjct: 299 VFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 358

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G S+H F  +  ++    +  S+L+ Y K G +  A  +F  +S  D+  W+ M+ 
Sbjct: 359 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 418

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            YA  G   + L++ + ML + I  +  T ++ L+ C+ +++ + G +IH L +    E 
Sbjct: 419 CYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEM 478

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
             ++  AL+DMY+K    + A  +F RM  KDVI+W  LF G+++N    ++  +F   +
Sbjct: 479 ETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNML 538

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG+RP+ +    +L    +L  L   + L    +  GF + + + +SLI ++ +C ++E
Sbjct: 539 SSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIE 598

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETC 458
            A+ VF  ++YK++ TW+ +++ Y F+    + LK F  +   S  + N  TF  ++  C
Sbjct: 599 DANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSAC 658

Query: 459 CRS 461
             S
Sbjct: 659 SHS 661


>gi|356515100|ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Glycine max]
          Length = 732

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 187/700 (26%), Positives = 335/700 (47%), Gaps = 55/700 (7%)

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           GHI K      IF+ NN+I+ Y   G      ++FD +  R +VS+  +++A  + G  D
Sbjct: 41  GHIPK----QSIFIHNNIISSYIALGEVLNARKLFDALPHRTVVSYNTLITAYCRRGNVD 96

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR---IEKNPFVGC 184
               +   M+ +GF P ++ +  ++  C  +  S     +   AL IR   ++ + FVG 
Sbjct: 97  DAWNLLCHMRGSGFAPTQYTLTGLLS-CELLNHSR---GVQLQALSIRNGLLDADAFVGT 152

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L  + +LG        F  +    +  WN+M+   A  G+  E   +   ++  GI++
Sbjct: 153 ALLGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNGFVEECKILFRDLVGTGISL 212

Query: 245 DKYTFINALQGCSLV---ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + + +  L G  LV    D + G QIHGL+++    C I+  N+LI +Y++   M    
Sbjct: 213 SEGSVVAVLSG--LVDSEEDLEYGEQIHGLMVKCGFGCEITAANSLISVYVRCKAMFAVE 270

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++FE++  ++V+SWNT+     +++ P     LF      G  P+  TF  ++  C  L 
Sbjct: 271 RLFEQVPVENVVSWNTVIDALVKSERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLR 330

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +   G  +    +  GF  +  V ++L+  + +C     AH  FD +  KN+ +WN L++
Sbjct: 331 NSVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALIT 390

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N C +  +     + + G   N  +F  V+    +S +   + Q+HG II++G+ S
Sbjct: 391 GYS-NICSSTSILLLQKMLQLGYSPNEFSFSAVL----KSSSMSNLHQLHGLIIRSGYES 445

Query: 482 CGYICSSLIKSYVNFGQLDNSF----EFSNG----------------------------A 509
             Y+ SSL+ +Y   G ++ +     EF+N                              
Sbjct: 446 NEYVLSSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLLSLL 505

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           E+ D  SW  ++SA        E   +F  +  A   PD Y   +I++ C  +       
Sbjct: 506 EKPDAVSWNIVISACARSNSYDEVFALFKHMHSACIHPDSYTFMSIISVCTKLCLLNLGS 565

Query: 570 SIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           S+H  +IK    N + ++ + +ID Y KCG I  +   F++    N +I +  LI A   
Sbjct: 566 SLHGLIIKTNLSNYDTFLGNVLIDMYGKCGSIDSSVKVFEEIMYKN-IITWTALITALGL 624

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           +G   EA+  F  ++L  L+P      +V+S+C + GLV++G  +F+ M ++YG+ P  D
Sbjct: 625 NGFAHEAVMRFQNLELMGLKPDALALRAVLSSCRYGGLVNEGMEIFRQMGTRYGVPPEHD 684

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            Y C+VD+L++NG +++A+ +I  MPF P+  ++RS L G
Sbjct: 685 HYHCVVDLLAKNGQIKEAEKIIACMPFPPNANIWRSFLEG 724



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 205/429 (47%), Gaps = 38/429 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG +VK GF  +I   N+LI++Y +C       R+F+++   N+VSW  ++ A ++
Sbjct: 234 GEQIHGLMVKCGFGCEITAANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALVK 293

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +    M L ++++M   G MP++    +V+  C S+  S  G S+H   ++   E +  V
Sbjct: 294 SERPMMALDLFLNMARRGLMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGFESDVIV 353

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++FY+K     +A + F  I   +V  WNA+I GY++       L ++  ML  G 
Sbjct: 354 GTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNALITGYSNICSSTSIL-LLQKMLQLGY 412

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF- 301
           + ++++F   L+  S+        Q+HGLIIRS  E +  ++++L+  Y ++  ++ A  
Sbjct: 413 SPNEFSFSAVLKSSSMSNL----HQLHGLIIRSGYESNEYVLSSLVMAYTRNGLINEALS 468

Query: 302 -------------------------------KVFERMADKDVISWNTLFGGFSENKNPGQ 330
                                          K+   +   D +SWN +    + + +  +
Sbjct: 469 FVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLLSLLEKPDAVSWNIVISACARSNSYDE 528

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLI 389
             +LF     +   P+  TF  ++  C KL  L+LG  L  L +     + +  + + LI
Sbjct: 529 VFALFKHMHSACIHPDSYTFMSIISVCTKLCLLNLGSSLHGLIIKTNLSNYDTFLGNVLI 588

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG+++ +  VF+ + YKNI TW  L++    N    + +  F N+   G++ +  
Sbjct: 589 DMYGKCGSIDSSVKVFEEIMYKNIITWTALITALGLNGFAHEAVMRFQNLELMGLKPDAL 648

Query: 450 TFFYVVETC 458
               V+ +C
Sbjct: 649 ALRAVLSSC 657



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/404 (23%), Positives = 171/404 (42%), Gaps = 42/404 (10%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L++ V G  VH  I++ GF +D+ +   L+  YSKC  F    + FD++ E+N+VSW  
Sbjct: 328 SLRNSVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFISAHKCFDQIEEKNVVSWNA 387

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +++    N      + +   M   G+ PNEF+  +V+K   S   S   + +H   ++  
Sbjct: 388 LIT-GYSNICSSTSILLLQKMLQLGYSPNEFSFSAVLK---SSSMSNL-HQLHGLIIRSG 442

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAE--------------------------------RVF 203
            E N +V  S++  Y + G +  A                                 ++ 
Sbjct: 443 YESNEYVLSSLVMAYTRNGLINEALSFVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLL 502

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   D   WN +I   A      E   +   M    I  D YTF++ +  C+ +   +
Sbjct: 503 SLLEKPDAVSWNIVISACARSNSYDEVFALFKHMHSACIHPDSYTFMSIISVCTKLCLLN 562

Query: 264 IGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           +G  +HGLII++ +    + + N LIDMY K   +D + KVFE +  K++I+W  L    
Sbjct: 563 LGSSLHGLIIKTNLSNYDTFLGNVLIDMYGKCGSIDSSVKVFEEIMYKNIITWTALITAL 622

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLD 380
             N    +    F    L G +P+ +    +L  C  G L++  + +  Q +    G   
Sbjct: 623 GLNGFAHEAVMRFQNLELMGLKPDALALRAVLSSCRYGGLVNEGMEIFRQ-MGTRYGVPP 681

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGY 423
           E +    ++ +  + G ++ A  +   + +  N   W   L GY
Sbjct: 682 EHDHYHCVVDLLAKNGQIKEAEKIIACMPFPPNANIWRSFLEGY 725


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 201/726 (27%), Positives = 348/726 (47%), Gaps = 20/726 (2%)

Query: 47   LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            L K+ S   NL S   G  +HG I+ LG+  D F+  +L+ MY KCG+  + ++VFD  +
Sbjct: 567  LLKACSSLTNLSS---GKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 623

Query: 107  ERNLVSWTLIVSAAIQNG-----EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-- 159
            +  + +  + V  ++ +G      F  G+  +  M   G  P+ F++  V+ V    G  
Sbjct: 624  QSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNF 683

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
              E G  IH + L+  ++ + F+  ++++ Y K G    A RVF  I    +V  WN MI
Sbjct: 684  RREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMI 743

Query: 219  ---GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
               GG   C    E   +  S     + +   +F  AL  CS   +   GRQIH  +++ 
Sbjct: 744  VGFGGSEICESSLELYMLAKS---NSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKM 800

Query: 276  EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             ++    +  +L+ MY K   +  A  VF  + DK +  WN +   + EN N      LF
Sbjct: 801  GLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELF 860

Query: 336  HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
                     P+  T S ++  C      D G  +              + S+L+ ++ +C
Sbjct: 861  GFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKC 920

Query: 396  GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES--GVEVNGCTFFY 453
            G    A+ VF ++  K++  W  L+SG C N    + LK F ++ +    ++ +      
Sbjct: 921  GCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 980

Query: 454  VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
            V+  C   E      Q+HG++IKTG     ++ SSLI  Y   G  + + +        +
Sbjct: 981  VINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPEN 1040

Query: 514  MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
            + +W +M+S          ++ +F+ ++  G  PD   + ++L + ++  +  + KS+H 
Sbjct: 1041 IVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHG 1100

Query: 574  FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            + ++LG  ++ ++ +A+ID Y KCG  K A   F +      +I +N +I  Y  HG   
Sbjct: 1101 YTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF-KKMQHKSLITWNLMIYGYGSHGDCR 1159

Query: 634  EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
             A+ +FD++K A   P   TF+S++SAC+H G V++G   F+ M   YG++P  + Y  +
Sbjct: 1160 TALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANM 1219

Query: 694  VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
            VD+L R G LE+A   I+ MP +   +++  LLS  R H N ELG  ++EKLL + P+  
Sbjct: 1220 VDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG 1279

Query: 754  AAHVLL 759
            + +V L
Sbjct: 1280 STYVQL 1285



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 154/633 (24%), Positives = 292/633 (46%), Gaps = 10/633 (1%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
            G Q+HG++++     D FL+  LI MY K G      RVF E+ ++ N+V W +++    
Sbjct: 688  GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFG 747

Query: 122  QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             +   +  L++Y+  K+N       +    +  C     S FG  IHC  +K+ ++ +P+
Sbjct: 748  GSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPY 807

Query: 182  VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            V  S+L+ Y+K G V  AE VF  +    +  WNAM+  Y     G+ AL +   M  + 
Sbjct: 808  VSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKS 867

Query: 242  ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            +  D +T  N +  CS+   +D G+ +H  + +  ++ + +I +AL+ +Y K      A+
Sbjct: 868  VLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAY 927

Query: 302  KVFERMADKDVISWNTLFGGFSENKNPGQTASLF--HKFILSGSRPNHVTFSILLRQCGK 359
             VF+ M +KD+++W +L  G  +N    +   +F   K      +P+    + ++  C  
Sbjct: 928  LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAG 987

Query: 360  LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            L  L  GLQ+    +  G +    V SSLI ++ +CG  EMA  VF ++  +NI  WN +
Sbjct: 988  LEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSM 1047

Query: 420  LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
            +S Y  N      ++ F  +   G+  +  +   V+     + +      +HG  ++ G 
Sbjct: 1048 ISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 1107

Query: 480  SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
             S  ++ ++LI  YV  G    +       +   + +W  M+      G    A+++F  
Sbjct: 1108 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDE 1167

Query: 540  LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCG 598
            L +AGE PD+    +++++C   G  +  K+    + +  G   ++   + ++D   + G
Sbjct: 1168 LKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAG 1227

Query: 599  DIKGARMAFDQSFNSNDVIVYNTLIMA-YAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVS 656
             ++ A           D  ++  L+ A   HH +    + I    KL  ++P + +T+V 
Sbjct: 1228 RLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNV---ELGILSAEKLLRMEPERGSTYVQ 1284

Query: 657  VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +++     GL ++   L   M  + G+Q  P C
Sbjct: 1285 LINLYMEAGLKNEAAKLLGEMKER-GLQKQPGC 1316



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 165/634 (26%), Positives = 295/634 (46%), Gaps = 24/634 (3%)

Query: 117  VSAAIQNGEFDMGLKMYVDMKTNGFMP---NEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
            + A IQ GE+   L +Y   K +G  P   + F   S++K C S+     G +IH   + 
Sbjct: 532  IRALIQKGEYLQALHLYT--KHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIV 589

Query: 174  IRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----YSISSDDVGCWNAMIGGYAHCGYGF 228
            +    +PF+  S++N Y K G +  A +VF       +S+ DV   N+MI GY       
Sbjct: 590  LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFK 649

Query: 229  EALNVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIVNA 286
            E +     ML  G+  D ++    +       +F  + G+QIHG ++R+ ++    +  A
Sbjct: 650  EGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTA 709

Query: 287  LIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            LIDMY K      A++VF  + DK +V+ WN +  GF  ++    +  L+     +  + 
Sbjct: 710  LIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKL 769

Query: 346  NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
               +F+  L  C +  +   G Q+ C  +  G  ++  V++SL+ M+ +CG V  A +VF
Sbjct: 770  VSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVF 829

Query: 406  DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
              V  K +  WN +++ Y  N      L+ F  + +  V  +  T   V+  C       
Sbjct: 830  SCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYD 889

Query: 466  MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
                +H  + K    S   I S+L+  Y   G   +++      E  DM +WG+++S L 
Sbjct: 890  YGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLC 949

Query: 526  HQGHNHEAVTIFHSLVEAGE--KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              G   EA+ +F  + +  +  KPD  I+ +++N+CA + A      +H  +IK G    
Sbjct: 950  KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLN 1009

Query: 584  VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            V+V S++ID Y+KCG  + A   F  S    +++ +N++I  Y+ + L   ++E+F+ M 
Sbjct: 1010 VFVGSSLIDLYSKCGLPEMALKVF-TSMRPENIVAWNSMISCYSRNNLPELSIELFNLML 1068

Query: 644  LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDMLSRN 700
               + P   +  SV+ A S    + KG    KS+     + G+         L+DM  + 
Sbjct: 1069 SQGIFPDSVSITSVLVAISSTASLLKG----KSLHGYTLRLGIPSDTHLKNALIDMYVKC 1124

Query: 701  GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            G+ + A+++ + M  + S   +  ++ G   HG+
Sbjct: 1125 GFSKYAENIFKKMQHK-SLITWNLMIYGYGSHGD 1157



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 148/322 (45%), Gaps = 25/322 (7%)

Query: 25   IHRLCGNNQFCS-----------DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL 73
            I  LC N +F             D  L+ D   +   ++    L++   G QVHG ++K 
Sbjct: 945  ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKT 1004

Query: 74   GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
            G   ++F+ ++LI +YSKCG     L+VF  M   N+V+W  ++S   +N   ++ ++++
Sbjct: 1005 GQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELF 1064

Query: 134  VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
              M + G  P+  ++ SV+    S  +   G S+H + L++ I  +  +  ++++ Y K 
Sbjct: 1065 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKC 1124

Query: 194  GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
            G    AE +F  +    +  WN MI GY   G    AL++   +   G T D  TF++ +
Sbjct: 1125 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLI 1184

Query: 254  QGCS---LVAD----FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
              C+    V +    F+I +Q +G      +E  +     ++D+  ++  ++ A+   + 
Sbjct: 1185 SACNHSGFVEEGKNFFEIMKQDYG------IEPKMEHYANMVDLLGRAGRLEEAYSFIKA 1238

Query: 307  M-ADKDVISWNTLFGGFSENKN 327
            M  + D   W  L      + N
Sbjct: 1239 MPTEADSSIWLCLLSASRTHHN 1260



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 23/213 (10%)

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP---DEYILGTILNSCAAIGAYQRTKSI 571
           AS  + + AL+ +G   +A+ ++      G  P     +   ++L +C+++      K+I
Sbjct: 526 ASVNSGIRALIQKGEYLQALHLYTK--HDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTI 583

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD----QSFNSNDVIVYNTLIMAYA 627
           H  +I LG+  + ++A+++++ Y KCG +  A   FD       ++ DV V N++I  Y 
Sbjct: 584 HGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYF 643

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK-------GCLLFKSMDSQ 680
                 E +  F +M +  ++P   +   V+S    +G   +       G +L  S+D  
Sbjct: 644 KFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGD 703

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHV-IEI 712
             ++ +      L+DM  + G   DA  V +EI
Sbjct: 704 SFLKTA------LIDMYFKFGLSTDAWRVFVEI 730


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 200/723 (27%), Positives = 362/723 (50%), Gaps = 34/723 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
             QVHG + K  FT++  + N LI+MY  C  G      RVFD    R+L++W  ++S  
Sbjct: 189 AVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVY 248

Query: 121 IQNGE----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA--LKI 174
            + G+    F +   M  D       P E   GS++     + +   G     F   LK 
Sbjct: 249 AKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLI-TATYLSSCSLGLLDQLFVRVLKS 307

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV- 233
               + +VG ++++ +A+ G +  A+ ++  +   +    N +I G     +G  A  + 
Sbjct: 308 GCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF 367

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDI-------GRQIHGLIIRS-EVECSISIVN 285
           + +     + +D Y  +      S +A+F         GR++H  ++R+  +   I++ N
Sbjct: 368 MGARDSAAVNVDTYVVL-----LSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSN 422

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L++MY K   +D A +VF+ M  +D ISWNT+     +N      A++ +  ++  +  
Sbjct: 423 GLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYC--EAAMMNYCLMRQNSI 480

Query: 346 NHVTFSIL--LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
               F+ +  L  C  L  L  G QL C A+  G   + +V+++L+ M+  CG +     
Sbjct: 481 GPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWE 540

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           +F+++S  ++ +WN ++     +     + ++ F N+ +SG+  N  TF   +       
Sbjct: 541 IFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLS 600

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMM 521
             ++  QIH  ++K G +    + ++L+  Y   G +D+    FS  + R D  SW +M+
Sbjct: 601 VLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMI 660

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S  ++ GH  EA+     ++ + +  D      +LN+CA++ A +R   +H F ++    
Sbjct: 661 SGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLE 720

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V V SA++D Y+KCG I  A   F  S +  +   +N++I  YA HGL  +A+EIF++
Sbjct: 721 SDVVVESALVDMYSKCGRIDYASKVF-HSMSQKNEFSWNSMISGYARHGLGRKALEIFEE 779

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+ +   P   TFVSV+SACSH GLV++G   F+ M+  YG+ P  + Y C++D+L R G
Sbjct: 780 MQESGESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAG 838

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK---ELGEWASEKLLLLLPKNDAAHVL 758
            L+  +  ++ MP +P+  ++R++L  C+   ++   +LG  AS  LL L P+N   +VL
Sbjct: 839 ELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVL 898

Query: 759 LSK 761
            SK
Sbjct: 899 SSK 901



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 164/690 (23%), Positives = 318/690 (46%), Gaps = 30/690 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  +VK G T+D+FL N+L+  Y+K        RVFD M  RN VSWT ++S  + +G 
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 126 FDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSI--HCFALKIRIEKNPF 181
            +    ++  M  +  G  P  F  GSV++ C   G    G+++  H    K     N  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 182 VGCSVLNFYAK--LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           V  ++++ Y    +G    A+RVF +    D+  WNA++  YA  G       +  +M +
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 240 E--GITM--DKYTF---INA--LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           +  GI +   ++TF   I A  L  CSL     +  Q+   +++S     + + +AL+  
Sbjct: 267 DDSGIELRPTEHTFGSLITATYLSSCSL----GLLDQLFVRVLKSGCSSDLYVGSALVSA 322

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           + +   +D A  ++  + +++ ++ N L  G  + ++    A +F     S +  N  T+
Sbjct: 323 FARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA-VNVDTY 381

Query: 351 SILLRQCGKLLDLDLGL----QLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVF 405
            +LL    +    + GL    ++    L  G +  +  V++ L+ M+ +CGA++ A  VF
Sbjct: 382 VVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVF 441

Query: 406 DNVSYKNITTWNELLSGYCFNC-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             +  ++  +WN +++    N  C+A ++  +C + ++ +  +       + +C      
Sbjct: 442 QLMEARDRISWNTIITALDQNGYCEAAMM-NYCLMRQNSIGPSNFAAISGLSSCAGLGLL 500

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               Q+H   +K G      + ++L+K Y   G++   +E  N     D+ SW ++M  +
Sbjct: 501 AAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVM 560

Query: 525 VH-QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              Q    E+V +F +++++G  P++      L +   +   +  K IH  ++K G   +
Sbjct: 561 ASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTED 620

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             V +A++  YAK GD+      F +     D I +N++I  Y ++G + EAM+    M 
Sbjct: 621 NAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMM 680

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            +       TF  V++AC+    +++G +   +   +  ++        LVDM S+ G +
Sbjct: 681 HSEQMMDHCTFSIVLNACASVAALERG-MEMHAFGLRSHLESDVVVESALVDMYSKCGRI 739

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + A  V   M  Q +   + S++SG   HG
Sbjct: 740 DYASKVFHSMS-QKNEFSWNSMISGYARHG 768



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 134/581 (23%), Positives = 261/581 (44%), Gaps = 22/581 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           S+H   +K  +  + F+   ++N YAK   + AA RVF  +   +   W  +I G+   G
Sbjct: 86  SLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSG 145

Query: 226 YGFEALNVVSSMLFEGI--TMDKYTFINALQGCSLVADFDIG--RQIHGLIIRSEVECSI 281
              +A  +  +ML EG       +TF + L+ C       +G   Q+HGL+ ++E   + 
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNT 205

Query: 282 SIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ NALI MY   S      A +VF+    +D+I+WN L   +++  +   T +LF    
Sbjct: 206 TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQ 265

Query: 340 LSGS----RPNHVTFSILLRQCGKLLDLDLGL--QLQCLALHCGFLDEENVTSSLIYMFC 393
              S    RP   TF  L+     L    LGL  QL    L  G   +  V S+L+  F 
Sbjct: 266 YDDSGIELRPTEHTFGSLI-TATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFA 324

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           R G ++ A  ++  +  +N  T N L++G           + F    +S   VN  T+  
Sbjct: 325 RHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA-VNVDTYVV 383

Query: 454 ----VVETCCRSENQQMVGQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
               + E     +  +   ++H  +++ G       + + L+  Y   G +D +      
Sbjct: 384 LLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQL 443

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            E  D  SW  +++AL   G+   A+  +  + +    P  +   + L+SCA +G     
Sbjct: 444 MEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAG 503

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA- 627
           + +H   +K G   +  V++A++  Y +CG +      F+ S +++DV+ +N+++   A 
Sbjct: 504 QQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFN-SMSAHDVVSWNSIMGVMAS 562

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
               ++E++++F  M  + L P++ TFV+ ++A +   +++ G  +   M  ++G+    
Sbjct: 563 SQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVM-LKHGVTEDN 621

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
                L+   +++G ++  + +   M  +     + S++SG
Sbjct: 622 AVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISG 662



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           +S+H  V+K G   ++++A+ ++++YAK   +  AR  FD      + + +  LI  +  
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFD-GMPGRNAVSWTCLISGHVL 143

Query: 629 HGLVSEAMEIFDKM--KLANLQPSQATFVSVMSACSHKG 665
            GL  +A  +F  M  +    +P+  TF SV+ AC   G
Sbjct: 144 SGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSG 182


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 201/722 (27%), Positives = 346/722 (47%), Gaps = 40/722 (5%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVG 149
           + G+    L +FD +     V W  I+   I N      L  Y  M+ +     + +   
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK-LGDVA----------- 197
           S +K C    + + G ++HC  L+     +  V  S+LN Y+  L +V            
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168

Query: 198 -AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
               RVF ++   +V  WN MI  Y       EA  +  +M+  GI     +F+N     
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228

Query: 257 SLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
             + D+D    ++GL+++  S+      +V++ I MY +   +D+A ++F+   +++   
Sbjct: 229 WRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           WNT+ GG+ +N  P +   LF + + S     + VTF   L    +L  LDLG QL    
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYI 348

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           L    + +  + +++I M+ RCG++  +  VF N+  +++ TWN ++S +  N  D + L
Sbjct: 349 LKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGL 408

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
                + + G  V+  T   ++       +Q++  Q H  +I+ G    G +   LI  Y
Sbjct: 409 MLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDGYLIDMY 467

Query: 494 VNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
              G +  +   FE ++  +R D A+W AM++     G + E   +F  ++E   +P+  
Sbjct: 468 AKSGLITTAQQLFEKNSXYDR-DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAV 526

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            L +IL +C  +G     K IH F I+   N  V+V +A++D Y+K G I  A   F ++
Sbjct: 527 TLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAET 586

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
              N V  Y T+I++Y  HG+   A+ +F  M  + ++P   TFV+++SACS+ GLVD+G
Sbjct: 587 LEKNSV-TYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEG 645

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP-TVYRSLLSGC 729
             +F+SM+ +Y +QPS + Y C+ DML R G + +A   ++ +  + +   ++ SLL  C
Sbjct: 646 LRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGAC 705

Query: 730 RIHGNKELGEWASEKLLLLLPKN--DAAHVLLSK--------------RKRQREGNLLDH 773
           RIHG  ELG+  + KLL +   +     HVLLS               RK  R+  L+  
Sbjct: 706 RIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKE 765

Query: 774 EG 775
            G
Sbjct: 766 AG 767



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/544 (26%), Positives = 246/544 (45%), Gaps = 29/544 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----GYFGWG 98
           D    + +L      +S  LG  +H H+++  F +   + N+L+ MYS C     Y G  
Sbjct: 103 DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162

Query: 99  L---------RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
                     RVFD M +RN+V+W  ++S  ++        KM+  M   G  P   +  
Sbjct: 163 YDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFV 222

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           +V      M   +    ++   +K+  +   + FV  S +  YA+LG V  A  +F    
Sbjct: 223 NVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCL 282

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
             +   WN MIGGY       EA+++ V  M  E   +D  TF++AL   S +   D+GR
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGR 342

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+H  I++S     + I+NA+I MY +   +  +FKVF  M ++DV++WNT+   F +N 
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   L  +    G   + VT + LL     L   ++G Q     +  G +  E +  
Sbjct: 403 LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMDG 461

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            LI M+ + G +  A  +F+  S   ++  TWN +++GY  N    +    F  + E  V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DN 501
             N  T   ++  C       +  QIHG  I+   +   ++ ++L+  Y   G +   +N
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAEN 581

Query: 502 SFEFSNGAERLDMAS--WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            F     AE L+  S  +  M+ +    G    A+++FH+++ +G KPD      IL++C
Sbjct: 582 VF-----AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC 636

Query: 560 AAIG 563
           +  G
Sbjct: 637 SYAG 640



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 177/336 (52%), Gaps = 4/336 (1%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S+ F   D  FL+   ++S+ L+   LG Q+H +I+K      + + N +I MYS+CG  
Sbjct: 315 SEQFXLDDVTFLSALTAISQ-LQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSI 373

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           G   +VF  M ER++V+W  +VSA +QNG  D GL +  +M+  GFM +   + +++ + 
Sbjct: 374 GTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLA 433

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISSDDVGC 213
            ++ + E G   H + ++  I+     G  +++ YAK G +  A+++F   S    D   
Sbjct: 434 SNLRSQEIGKQAHAYLIRHGIQFEGMDG-YLIDMYAKSGLITTAQQLFEKNSXYDRDEAT 492

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WNAMI GY   G   E   V   M+ + +  +  T  + L  C+ +    +G+QIHG  I
Sbjct: 493 WNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAI 552

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           R  +  ++ +  AL+DMY KS  + YA  VF    +K+ +++ T+   + ++    +  S
Sbjct: 553 RCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALS 612

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           LFH  + SG +P+ VTF  +L  C     +D GL++
Sbjct: 613 LFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 222/487 (45%), Gaps = 13/487 (2%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           ++G +VKLG  + +D F+ ++ I MY++ G   +   +FD   ERN   W  ++   +QN
Sbjct: 240 LYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                 + ++V  M++  F  ++    S +     +   + G  +H + LK        +
Sbjct: 300 NCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVI 359

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y++ G +  + +VF ++   DV  WN M+  +   G   E L +V  M  +G 
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGF 419

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T    L   S +   +IG+Q H  +IR  ++    +   LIDMY KS  +  A +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQ 478

Query: 303 VFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +FE+ +  D+D  +WN +  G+++N    +  ++F K I    RPN VT + +L  C  +
Sbjct: 479 LFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             + LG Q+   A+ C       V ++L+ M+ + GA+  A +VF     KN  T+  ++
Sbjct: 539 GTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIHGAIIKT 477
             Y  +      L  F  +  SG++ +  TF  ++  C  +   +    + Q      K 
Sbjct: 599 LSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVT 535
             SS  Y C + +   V  G++  ++EF    G E      WG+++ A    G       
Sbjct: 659 QPSSEHYCCVADMLGRV--GRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKV 716

Query: 536 IFHSLVE 542
           + + L+E
Sbjct: 717 VANKLLE 723



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 18/296 (6%)

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCT 450
            CR G    A  +FD++       WN ++ G+  N    D L  +  +  S   + +  T
Sbjct: 47  LCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYT 106

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY----VNFGQLDNSFEFS 506
           F   ++ C ++ + ++   +H  ++++ F S   + +SL+  Y         L  +++F+
Sbjct: 107 FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFN 166

Query: 507 N---------GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           N            + ++ +W  M+S  V      EA  +F +++  G +P       +  
Sbjct: 167 NCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226

Query: 558 SCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           +   +  Y     ++  V+KLG  +  + +V S+ I  YA+ G +  AR  FD     N 
Sbjct: 227 AVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN- 285

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQATFVSVMSACSHKGLVDKG 670
             V+NT+I  Y  +    EA+++F + M+         TF+S ++A S    +D G
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLG 341


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 333/658 (50%), Gaps = 12/658 (1%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ +  +  +F   L  +  M+ +G  P+ F    V      +GA   G ++H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 173 KIRI---EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG---YAHCGY 226
           +  +   + +  V  S++  YA+ G V  A R+F  +   DV  W A+I G      CG 
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 227 GFEAL-NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           G   L  +V S    G   +  T  + L+ C ++ +  +G  +HG  +++ V    S+V+
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L  MY K    + A  +F  + +KD++SW +L G +    +  +   LF     SG +P
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQP 314

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + V  S LL   G    +  G       +   F D   + ++LI M+ +C  V++A +VF
Sbjct: 315 DEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF 374

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW---ESGVEVNGCTFFYVVETCCRSE 462
             +  ++  +W+ ++  YC    D   L+ +  +    +   E +  +   ++ +C R  
Sbjct: 375 RMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLG 434

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             ++    H   IK        + ++LI  Y   G  D + +     +  D+ +W A++S
Sbjct: 435 RLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALIS 494

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           +  H GH+ +A+ ++  ++  G KP+   L ++++SCA + A +  + IH  V  +G   
Sbjct: 495 SYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLEC 554

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           ++ + +A++D Y KCG +  AR  FD S    DV+ +N +I  Y  HG   +A+++F  M
Sbjct: 555 DLSICTALVDMYMKCGQLGIARKMFD-SMLERDVVTWNVMISGYGMHGEAIQALKLFSMM 613

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +  N++P+  TF++++SAC H GLVDKG  LF  M+ +Y ++P+   Y C+VD+L ++G+
Sbjct: 614 ERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKSGH 672

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L++A+ V+  MP +P   ++ +LL  C++H N E+G   ++K     P+ND  ++L+S
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 255/588 (43%), Gaps = 10/588 (1%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S +  L +  +G  VH + V+ G       + + ++L+ MY++CG     +R+FDEM ER
Sbjct: 115 SAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER 174

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVCVSMGASEFG 164
           ++V+WT ++S  + NG+   GL   V M  +    G  PN   + S ++ C  +G    G
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H F +K  +   P V  S+ + Y K      A  +F  +   D+  W ++IG Y   
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  +A+ +   M   G+  D+      L G    A    G+  H  I+R     S+ I 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NALI MY K   +D A  VF  +  +D  SW+++   + +     +   L+ +       
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 345 P---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
               +  +   ++  C +L  L LG    C ++     +  +V ++LI M+ RCG  ++A
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +F  V  K++ TW+ L+S Y       D L  +  +   GV+ N  T   V+ +C   
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANL 534

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +    IH  +   G      IC++L+  Y+  GQL  + +  +     D+ +W  M+
Sbjct: 535 AALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMI 594

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S     G   +A+ +F  +     KP+      IL++C   G   + + +   + +    
Sbjct: 595 SGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLE 654

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             +   + ++D   K G ++ A           D  ++ TL+ A   H
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 37  DSFLRKDPIFLAKSLS-LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +S L+ D + ++  L+ L  + K R  G   H  IV+  F + + + N LI+MY+KC   
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRG-GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK---TNGFMPNEFAVGSVM 152
                VF  + +R+  SW+ +V A  + G     L++Y +M+    + F  +  ++ S++
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISII 427

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C  +G    G S HC+++K    +N  V  ++++ Y + G+   A ++F  + + DV 
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W+A+I  Y+H G+  +AL +   ML EG+  +  T ++ +  C+ +A  + G  IH  +
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
               +EC +SI  AL+DMY+K   +  A K+F+ M ++DV++WN +  G+  +    Q  
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            LF        +PN +TF  +L  C     +D G +L
Sbjct: 608 KLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 167/386 (43%), Gaps = 8/386 (2%)

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H L + S +         L+  Y  +     A   F      D   WN+L        +
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN---V 384
              T S   +   SG+RP+  T  ++     +L  L +G  +   ++  G L+ +    V
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG-YCFNCCDAD---VLKTFCNIW 440
            SSL+YM+ RCG+V  A  +FD +  +++  W  ++SG  C   C      +++   +  
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           + G   N  T    +E C       +   +HG  +K G   C  + SSL   Y      +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++          D+ SW +++ A    GH  +AV +F  + E+G +PDE ++  +L    
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
                +  K+ H  +++  F   V + +A+I  YAKC  +  A   F +  +  D   ++
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDTDSWS 386

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLAN 646
           ++++AY   GL  + +E++ +M+  +
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRD 412



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG   H + +K     +  + N LI+MY +CG F    ++F  +  +++V+W+ ++S+  
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     L +Y  M T G  PN   + SV+  C ++ A E G  IH     + +E +  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G +  A ++F S+   DV  WN MI GY   G   +AL + S M    
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF+  L  C      D GR++   +    +E ++     ++D+  KS  +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 302 KVFERMA-DKDVISWNTLFGGFSENKN 327
            V   M  + D   W TL G    + N
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDN 704


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 333/658 (50%), Gaps = 12/658 (1%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ +  +  +F   L  +  M+ +G  P+ F    V      +GA   G ++H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 173 KIRI---EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG---YAHCGY 226
           +  +   + +  V  S++  YA+ G V  A R+F  +   DV  W A+I G      CG 
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 227 GFEAL-NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           G   L  +V S    G   +  T  + L+ C ++ +  +G  +HG  +++ V    S+V+
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L  MY K    + A  +F  + +KD++SW +L G +    +  +   LF     SG +P
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQP 314

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + V  S LL   G    +  G       +   F D   + ++LI M+ +C  V++A +VF
Sbjct: 315 DEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF 374

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW---ESGVEVNGCTFFYVVETCCRSE 462
             +  ++  +W+ ++  YC    D   L+ +  +    +   E +  +   ++ +C R  
Sbjct: 375 RMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLG 434

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             ++    H   IK        + ++LI  Y   G  D + +     +  D+ +W A++S
Sbjct: 435 RLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALIS 494

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           +  H GH+ +A+ ++  ++  G KP+   L ++++SCA + A +  + IH  V  +G   
Sbjct: 495 SYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLEC 554

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           ++ + +A++D Y KCG +  AR  FD S    DV+ +N +I  Y  HG   +A+++F  M
Sbjct: 555 DLSICTALVDMYMKCGQLGIARKMFD-SMLERDVVTWNVMISGYGMHGEAIQALKLFSMM 613

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +  N++P+  TF++++SAC H GLVDKG  LF  M+ +Y ++P+   Y C+VD+L ++G+
Sbjct: 614 ERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKSGH 672

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L++A+ V+  MP +P   ++ +LL  C++H N E+G   ++K     P+ND  ++L+S
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 255/588 (43%), Gaps = 10/588 (1%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S +  L +  +G  VH + V+ G       + + ++L+ MY++CG     +R+FDEM ER
Sbjct: 115 SAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER 174

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVCVSMGASEFG 164
           ++V+WT ++S  + NG+   GL   V M  +    G  PN   + S ++ C  +G    G
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H F +K  +   P V  S+ + Y K      A  +F  +   D+  W ++IG Y   
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  +A+ +   M   G+  D+      L G    A    G+  H  I+R     S+ I 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NALI MY K   +D A  VF  +  +D  SW+++   + +     +   L+ +       
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 345 P---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
               +  +   ++  C +L  L LG    C ++     +  +V ++LI M+ RCG  ++A
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +F  V  K++ TW+ L+S Y       D L  +  +   GV+ N  T   V+ +C   
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANL 534

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +    IH  +   G      IC++L+  Y+  GQL  + +  +     D+ +W  M+
Sbjct: 535 AALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMI 594

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S     G   +A+ +F  +     KP+      IL++C   G   + + +   + +    
Sbjct: 595 SGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLE 654

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             +   + ++D   K G ++ A           D  ++ TL+ A   H
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 37  DSFLRKDPIFLAKSLS-LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +S L+ D + ++  L+ L  + K R  G   H  IV+  F + + + N LI+MY+KC   
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRG-GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK---TNGFMPNEFAVGSVM 152
                VF  + +R+  SW+ +V A  + G     L++Y +M+    + F  +  ++ S++
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISII 427

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C  +G    G S HC+++K    +N  V  ++++ Y + G+   A ++F  + + DV 
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W+A+I  Y+H G+  +AL +   ML EG+  +  T ++ +  C+ +A  + G  IH  +
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
               +EC +SI  AL+DMY+K   +  A K+F+ M ++DV++WN +  G+  +    Q  
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            LF        +PN +TF  +L  C     +D G +L
Sbjct: 608 KLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 167/386 (43%), Gaps = 8/386 (2%)

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H L + S +         L+  Y  +     A   F      D   WN+L        +
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN---V 384
              T S   +   SG+RP+  T  ++     +L  L +G  +   ++  G L+ +    V
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG-YCFNCCDAD---VLKTFCNIW 440
            SSL+YM+ RCG+V  A  +FD +  +++  W  ++SG  C   C      +++   +  
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           + G   N  T    +E C       +   +HG  +K G   C  + SSL   Y      +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++          D+ SW +++ A    GH  +AV +F  + E+G +PDE ++  +L    
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
                +  K+ H  +++  F   V + +A+I  YAKC  +  A   F +  +  D   ++
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF-RMLHQRDTDSWS 386

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLAN 646
           ++++AY   GL  + +E++ +M+  +
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRD 412



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG   H + +K     +  + N LI+MY +CG F    ++F  +  +++V+W+ ++S+  
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     L +Y  M T G  PN   + SV+  C ++ A E G  IH     + +E +  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G +  A ++F S+   DV  WN MI GY   G   +AL + S M    
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF+  L  C      D GR++   +    +E ++     ++D+  KS  +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 302 KVFERMA-DKDVISWNTLFGGFSENKN 327
            V   M  + D   W TL G    + N
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDN 704


>gi|297810955|ref|XP_002873361.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319198|gb|EFH49620.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 849

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 191/742 (25%), Positives = 352/742 (47%), Gaps = 48/742 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AI 121
           G  +HG + KLG      +  +++ MY+KC       ++F +M   + V W ++++  ++
Sbjct: 40  GRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSV 99

Query: 122 QNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             G   M  + +  M   +   P+      ++ VCV +G S  G S+H + +K  +EK+ 
Sbjct: 100 SCGRETM--RFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDT 157

Query: 181 FVGCSVLNFYAKLGDVAA-AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            VG ++++ YAK G +   A   F  I+  DV  WNA+I G++      +A      ML 
Sbjct: 158 LVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLK 217

Query: 240 EGITMDKYTFINALQGCSLVAD---FDIGRQIHGLII-RSEVECSISIVNALIDMYIKSS 295
           E    +  T  N L  C+ +     +  GRQIH  ++ RS ++  + + N+L+  Y++  
Sbjct: 218 EPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILL 354
            ++ A  +F RM  KD++SWN +  G++ N    +   LFH  +  G    + VT   +L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDSVTILSIL 337

Query: 355 RQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
             C +L DL  G ++    L H   L++ +V ++LI  + R G    A+  F  +S K+I
Sbjct: 338 PVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDI 397

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +L  +  +      L    +++   + ++  T   +++ C   +    V ++HG 
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGY 457

Query: 474 IIKTG-----------------FSSCGYI------------------CSSLIKSYVNFGQ 498
            +K G                 ++ CG +                   +SL+  YVN G 
Sbjct: 458 SVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGS 517

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            D++    +     D+ +W  M+         +EA+ +F  +   G +P+   +  +L  
Sbjct: 518 HDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNLLPV 577

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA + +    +  H ++I+ G   ++ +   ++D YAKCG +K A   F QS    D+++
Sbjct: 578 CAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLVM 635

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +  ++  YA HG   EA+ IF  M  +N++P      ++++AC H GL+  G  ++ S+ 
Sbjct: 636 FTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDHVFITTLLTACCHAGLIQDGLQIYDSIR 695

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           + +GM+P+ + Y C VD+L+R G L+DA   I  MP +P+  ++ +LL  C  +   +LG
Sbjct: 696 AVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGTLLRACTTYNRMDLG 755

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
              +  LL     +   HVL+S
Sbjct: 756 HSVANHLLQAESDDTGNHVLIS 777



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 238/511 (46%), Gaps = 32/511 (6%)

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSG 296
           L  G   D   F++ ++ C+ V++   GR +HG + +   + C+  +  ++++MY K   
Sbjct: 13  LLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACT-EVSKSVLNMYAKCRR 71

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILL 354
           MD   K+F +M   D + WN +  G S   + G+    F K +      +P+ VTF+ILL
Sbjct: 72  MDDCQKMFRQMDSVDPVVWNIVLTGLS--VSCGRETMRFFKAMHFADEPKPSSVTFAILL 129

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG-AVEMAHSVFDNVSYKNI 413
             C +L D   G  +    +  G   +  V ++L+ M+ + G  +  A + FD+++ K++
Sbjct: 130 PVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDV 189

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC---RSENQQMVGQI 470
            +WN +++G+  N   AD  ++FC + +   E N  T   V+  C    ++   +   QI
Sbjct: 190 VSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQI 249

Query: 471 HGAII-KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           H  ++ ++   +  ++C+SL+  Y+  G+++ +          D+ SW  +++       
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHE 309

Query: 530 NHEAVTIFHSLVEAGEKP-DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVA 587
             +A+ +FH+LV+ G+   D   + +IL  CA +      K IH ++++  +  E   V 
Sbjct: 310 WLKALQLFHNLVQKGDVSLDSVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVG 369

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+I  YA+ GD   A  AF    +  D+I +N ++ A+A      + + +   +    +
Sbjct: 370 NALISFYARFGDTSAAYWAFSL-MSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAI 428

Query: 648 QPSQATFVSVMSACSH----------KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
                T +S++  C++           G   K  LL    + + G          L+D  
Sbjct: 429 TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLG--------NALLDAY 480

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           ++ G +E A  + + +  + +   Y SLLSG
Sbjct: 481 AKCGNVEYAHKIFQGLSERRTLVTYNSLLSG 511


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 292/569 (51%), Gaps = 3/569 (0%)

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFIN 251
           LG VA   ++F  +S  D+  +N +I G++  G    ++ + + +     +  D +T+  
Sbjct: 59  LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAF 118

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           A+   S + D  +G  +H   I   V  ++ + +A++D+Y K +  + A KVF+ M ++D
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERD 178

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            + WNT+  GFS N     +  +F   +  G   +  T + +L    +L +  LG+ +QC
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           LA   G   +  V + LI ++ +CG       +FD +   ++ ++N ++SGY FN     
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            +  F  +  SG  VN  T   ++       + Q+   I    +K G      + ++L  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y    ++  + +  + +    +ASW AM+S     G    A+++F  ++     P+   
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVT 417

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           + +IL++CA +GA    K +H  +      + VYV++A++D YAKCG I  AR  FD   
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           + N V+ +N +I  Y  HG   EA+++F +M  + + P+  TF+S++ ACSH GLV +G 
Sbjct: 478 DKN-VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGN 536

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
            +F SM + YG QP  + Y C+VD+L R G L +A   IE MP +P P V+ +LL  C I
Sbjct: 537 EIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 596

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           H N E+   AS++L  L P+N   +VLLS
Sbjct: 597 HKNTEMANVASKRLFQLDPENVGYYVLLS 625



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 230/494 (46%), Gaps = 10/494 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D    A ++S +  L+   +G  +H H +  G  +++F+ + ++ +Y K        
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD M ER+ V W  ++S   +N  F+  ++++VDM   G   +   + +V+     + 
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  I C A K  +  + +V   +++ Y+K G       +F  I   D+  +NAMI 
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY        A+ +   +L  G  ++  T +  +          + R I  L ++  +  
Sbjct: 289 GYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIIL 348

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
             S+  AL  +Y + + + +A ++F+   +K + SWN +  G+++N    +  SLF + +
Sbjct: 349 QPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM 408

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
              S PN VT + +L  C +L  L +G  +  L           V+++L+ M+ +CG++ 
Sbjct: 409 PQLS-PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIV 467

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +FD +  KN+ TWN +++GY  +    + LK F  + +SG+   G TF  ++  C 
Sbjct: 468 EARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACS 527

Query: 460 RSENQQMVGQI-HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM---- 514
            S       +I H      GF       + ++      GQL N+ EF    ER+ +    
Sbjct: 528 HSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEF---IERMPLEPGP 584

Query: 515 ASWGAMMSA-LVHQ 527
           A WGA++ A ++H+
Sbjct: 585 AVWGALLGACMIHK 598



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/637 (20%), Positives = 262/637 (41%), Gaps = 23/637 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   ++  G   D+     L   +   G      ++F+++++ +L  + +++     NG
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                + +Y  + K     P+ F     +     +     G  +H  ++   +  N FVG
Sbjct: 92  LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++++ Y K      A +VF  +   D   WN MI G++   Y  +++ V   ML  G++
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T    L   + + ++ +G  I  L  +  +   + ++  LI +Y K         +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+++   D+IS+N +  G++ N       +LF + + SG R N  T   L+        L
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            L   +Q L+L  G + + +V+++L  ++CR   V+ A  +FD    K++ +WN ++SGY
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      +  F  +    +  N  T   ++  C +     +   +HG I      S  
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ ++L+  Y   G +  + +  +     ++ +W AM++     GH  EA+ +F+ ++++
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           G  P      +IL +C+  G       I H      GF       + ++D   + G +  
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS--- 659
           A    ++        V+  L+ A   H   +  M      +L  L P    +  ++S   
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHK--NTEMANVASKRLFQLDPENVGYYVLLSNIY 628

Query: 660 --------ACSHKGLVDK-------GCLLFKSMDSQY 681
                   A S + +V K       GC L +  D QY
Sbjct: 629 STDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQY 665



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 159/321 (49%), Gaps = 1/321 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L  D   LA  L+    L+   LG  +     K G  +D+++   LI++YSKCG   
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
            G  +FD++ + +L+S+  ++S    N E +  + ++ ++  +G   N   +  ++ V +
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                +    I   +LKI I   P V  ++   Y +L +V  A ++F       +  WNA
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GY   G    A+++   M+ + ++ +  T  + L  C+ +    IG+ +HGLI    
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +E ++ +  AL+DMY K   +  A ++F+ M DK+V++WN +  G+  + +  +   LF+
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 337 KFILSGSRPNHVTFSILLRQC 357
           + + SG  P  VTF  +L  C
Sbjct: 506 EMLQSGIPPTGVTFLSILYAC 526


>gi|302820681|ref|XP_002992007.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
 gi|300140249|gb|EFJ06975.1| hypothetical protein SELMODRAFT_134551 [Selaginella moellendorffii]
          Length = 947

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 196/697 (28%), Positives = 336/697 (48%), Gaps = 12/697 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  I++ G   D  L N L+  Y KCG        F+++ E+N+VSW+  ++A  QNG
Sbjct: 250 EIHLQIIETGLEKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNG 309

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F   ++    M   G   NE    S++   V     E G  +    ++     N  V  
Sbjct: 310 YFWEAIRQLQKMDLEGVQANEVTFVSILDASVWEEIEE-GEFLRSRIIESGYGSNVAVCN 368

Query: 185 SVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           S++N Y K   +  A+ VF+S+    +   W++++  YA      EA+ +   M  EG+ 
Sbjct: 369 SLVNMYGKCHSLGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLK 428

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL---IDMYIKSSGMDYA 300
            D+ T I+ L  C  +       QIH  ++ + +E  + + NAL   ++MY +   ++ A
Sbjct: 429 PDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDA 488

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR---PNHVTFSILLRQC 357
            KVF  M  KD I WN+L   ++++ +  +   +F +  L G +   PN VTF   +  C
Sbjct: 489 RKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDAC 548

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTW 416
              +DL  G+     A   G      V +SLI M+ +C  +E A SVF+ +   +++ +W
Sbjct: 549 ANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSW 608

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N L+S +  N      L+T+  +   GV  +  TF  V++ C    +     +IH    +
Sbjct: 609 NALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQASE 668

Query: 477 TGFSSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            GF S   +  +L+  Y   G  ++    F    +R D  +W A+ +A+   G    A+ 
Sbjct: 669 GGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQQR-DAIAWNAVAAAITQTGDQRRALG 727

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           I   +   G KPD     T+L++CA   A    K  H   ++LGF  ++ + +A+++ Y 
Sbjct: 728 ILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYG 787

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++ A   F  +    + + +NTLI+AYA +G V  A+ +F  M L  + P+Q +F+
Sbjct: 788 KCGSLREANRVF-AAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFL 846

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           S+  ACSH G++++G   F+ M + +G+ P+P+ YGC VD+L R G L DA+ ++  M  
Sbjct: 847 SIFFACSHAGMLEEGSKYFQYMVADHGLVPTPEHYGCFVDLLGRTGRLADAEELVTGMAE 906

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
                 +  LL    +  N E  + A +  + L  K 
Sbjct: 907 DARSLDWLILLGSSTLQENVEQAKRAVQHAVKLGSKQ 943



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 171/671 (25%), Positives = 313/671 (46%), Gaps = 14/671 (2%)

Query: 58  KSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           KS   G   H  I + GF  +D+ +QN L+++Y +C        VFDE+  ++LVSWT +
Sbjct: 141 KSFSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAM 200

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +SA +QNG  D  +  +  M+ +G  P      ++++  +    +     IH   ++  +
Sbjct: 201 ISAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGL 260

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           EK+  +   ++  Y K GD+   +  F  +   +V  W+  I  ++  GY +EA+  +  
Sbjct: 261 EKDDKLLNLLVRSYGKCGDMEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQK 320

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG+  ++ TF++ L   S+  + + G  +   II S    ++++ N+L++MY K   
Sbjct: 321 MDLEGVQANEVTFVSILDA-SVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHS 379

Query: 297 MDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           +  A +VF  M + K+ ISW++L   +++N    +   LF    L G +P+ VT   +L 
Sbjct: 380 LGNAKEVFWSMEERKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLD 439

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDE---ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            CG L       Q+    L  G   +    N  ++L+ M+ RC ++E A  VF  +  K+
Sbjct: 440 ACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKD 499

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESG---VEVNGCTFFYVVETCCRSENQQMVGQ 469
              WN LL+ Y  +    + L+ F  +   G   ++ N  TF   ++ C  S +      
Sbjct: 500 AICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIV 559

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQG 528
            H    + G  S   + +SLIK Y    +L+ +    N    + D+ SW A++SA    G
Sbjct: 560 FHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNG 619

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
               A+  + +++  G +PD     ++L++CA +G+    + IH    + GF +   V  
Sbjct: 620 DGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQASEGGFESVDAVLG 679

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            +++ Y +CG+   A +AF +     D I +N +  A    G    A+ I   M    ++
Sbjct: 680 TLVNMYGRCGNAMEAELAFGK-LQQRDAIAWNAVAAAITQTGDQRRALGILRGMDNEGVK 738

Query: 649 PSQATFVSVMSACSH-KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           P   TF++++  C+    LV+      ++M+  +G          L++M  + G L +A 
Sbjct: 739 PDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILG--NALLNMYGKCGSLREAN 796

Query: 708 HVIEIMPFQPS 718
            V   MP + S
Sbjct: 797 RVFAAMPVRNS 807



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 309/658 (46%), Gaps = 23/658 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H V+ G   + F++N LI MY KCG      ++ D M + N+ SWT++++A  Q
Sbjct: 48  GKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDRMEDSNVFSWTIMLAAYAQ 107

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  D  L+ +  M+  G   N   + S +  C S    ++ +S        RI++  F+
Sbjct: 108 NGHLDDALECFWKMELEGVRANRVTIISALGCCKSFSRGQWFHS--------RIKQEGFL 159

Query: 183 GCSVL------NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
              V+      + Y +  +V  A  VF  I + D+  W AMI  +   G+   A+    S
Sbjct: 160 PDDVMIQNALVSLYGRCCEVDQARSVFDEICNKDLVSWTAMISAFVQNGHPDRAMVCFWS 219

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  +G+   + TFI  L+      D  +  +IH  II + +E    ++N L+  Y K   
Sbjct: 220 MQADGVKPCRVTFITILEAVMETRDARVCEEIHLQIIETGLEKDDKLLNLLVRSYGKCGD 279

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M+   + FE++ +K+V+SW+     FS+N    +      K  L G + N VTF  +L  
Sbjct: 280 MEKMKESFEKLDEKNVVSWSGTIAAFSQNGYFWEAIRQLQKMDLEGVQANEVTFVSIL-D 338

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITT 415
                +++ G  L+   +  G+     V +SL+ M+ +C ++  A  VF ++   KN  +
Sbjct: 339 ASVWEEIEEGEFLRSRIIESGYGSNVAVCNSLVNMYGKCHSLGNAKEVFWSMEERKNEIS 398

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           W+ L++ Y  N    + +K F ++   G++ +  T   V++ C      +   QIH  ++
Sbjct: 399 WSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHARVL 458

Query: 476 KTGFSS---CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           + G           ++L+  Y     L+++ +   G  R D   W ++++A    G   E
Sbjct: 459 EAGLERDVVVANALTALLNMYARCHSLEDARKVFAGMCRKDAICWNSLLAAYAQSGSGKE 518

Query: 533 AVTIFHSLVEAG---EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           A+ IF  +   G    KP++    + +++CA           H    ++G ++ V VA++
Sbjct: 519 ALQIFREMDLEGCKSMKPNDVTFVSTIDACANSMDLASGIVFHRRAAEVGMDSNVVVANS 578

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +I  Y KC  ++ A   F++     D++ +N LI A+A +G    A+E +  M    ++P
Sbjct: 579 LIKMYGKCKRLEEAMSVFNRILGIRDLVSWNALISAFAQNGDGRRALETYWAMIREGVRP 638

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            + TF+SV+ AC+  G + +G  + +   S+ G +      G LV+M  R G   +A+
Sbjct: 639 DRITFISVLDACATLGSIAEGREIHRQA-SEGGFESVDAVLGTLVNMYGRCGNAMEAE 695



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 192/426 (45%), Gaps = 7/426 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA---MYSKCGYFG 96
           L+ D + L   L    +L++    +Q+H  +++ G   D+ + N L A   MY++C    
Sbjct: 427 LKPDRVTLISVLDACGDLRASKQSSQIHARVLEAGLERDVVVANALTALLNMYARCHSLE 486

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG---FMPNEFAVGSVMK 153
              +VF  M  ++ + W  +++A  Q+G     L+++ +M   G     PN+    S + 
Sbjct: 487 DARKVFAGMCRKDAICWNSLLAAYAQSGSGKEALQIFREMDLEGCKSMKPNDVTFVSTID 546

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVG 212
            C +      G   H  A ++ ++ N  V  S++  Y K   +  A  VF  I    D+ 
Sbjct: 547 ACANSMDLASGIVFHRRAAEVGMDSNVVVANSLIKMYGKCKRLEEAMSVFNRILGIRDLV 606

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WNA+I  +A  G G  AL    +M+ EG+  D+ TFI+ L  C+ +     GR+IH   
Sbjct: 607 SWNALISAFAQNGDGRRALETYWAMIREGVRPDRITFISVLDACATLGSIAEGREIHRQA 666

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
                E   +++  L++MY +      A   F ++  +D I+WN +    ++  +  +  
Sbjct: 667 SEGGFESVDAVLGTLVNMYGRCGNAMEAELAFGKLQQRDAIAWNAVAAAITQTGDQRRAL 726

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            +       G +P++VTF  LL  C     L  G      A+  GF  +  + ++L+ M+
Sbjct: 727 GILRGMDNEGVKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMY 786

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +CG++  A+ VF  +  +N  +WN L+  Y  N      +  F ++   G+  N  +F 
Sbjct: 787 GKCGSLREANRVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFL 846

Query: 453 YVVETC 458
            +   C
Sbjct: 847 SIFFAC 852



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 5/217 (2%)

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + N  T+  +++ C R    +   +IH   ++ G     ++ + LI  Y   G L+ + +
Sbjct: 26  DANPSTYALMLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARK 85

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +  E  ++ SW  M++A    GH  +A+  F  +   G + +   + + L  C    +
Sbjct: 86  ILDRMEDSNVFSWTIMLAAYAQNGHLDDALECFWKMELEGVRANRVTIISALGCCK---S 142

Query: 565 YQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           + R +  H  + + GF   +V + +A++  Y +C ++  AR  FD+  N  D++ +  +I
Sbjct: 143 FSRGQWFHSRIKQEGFLPDDVMIQNALVSLYGRCCEVDQARSVFDEICN-KDLVSWTAMI 201

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
            A+  +G    AM  F  M+   ++P + TF++++ A
Sbjct: 202 SAFVQNGHPDRAMVCFWSMQADGVKPCRVTFITILEA 238



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 3/172 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +     L    +  + V G   H   ++LGF  DI L N L+ MY KCG      
Sbjct: 737 VKPDNVTFITLLDTCADCNALVEGKIFHARAMELGFGFDIILGNALLNMYGKCGSLREAN 796

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF  M  RN VSW  ++ A  QNG   + + ++ DM   G +PN+ +  S+   C   G
Sbjct: 797 RVFAAMPVRNSVSWNTLIVAYAQNGHVKLAIGLFRDMDLEGIVPNQVSFLSIFFACSHAG 856

Query: 160 ASEFG--YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
             E G  Y  +  A    +      GC V +   + G +A AE +   ++ D
Sbjct: 857 MLEEGSKYFQYMVADHGLVPTPEHYGCFV-DLLGRTGRLADAEELVTGMAED 907


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 333/658 (50%), Gaps = 12/658 (1%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ +  +  +F   L  +  M+ +G  P+ F    V      +GA   G ++H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 173 KIRI---EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG---YAHCGY 226
           +  +   + +  V  S++  YA+ G V  A R+F  +   DV  W A+I G      CG 
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 227 GFEAL-NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           G   L  +V S    G   +  T  + L+ C ++ +  +G  +HG  +++ V    S+V+
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVS 254

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L  MY K    + A  +F  + +KD++SW +L G +    +  +   LF     SG +P
Sbjct: 255 SLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQP 314

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + V  S LL   G    +  G       +   F D   + ++LI M+ +C  V++A +VF
Sbjct: 315 DEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVF 374

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW---ESGVEVNGCTFFYVVETCCRSE 462
             +  ++  +W+ ++  YC    D   L+ +  +    +   E +  +   ++ +C R  
Sbjct: 375 RMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLG 434

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             ++    H   IK        + ++LI  Y   G  D + +     +  D+ +W A++S
Sbjct: 435 RLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALIS 494

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           +  H GH+ +A+ ++  ++  G KP+   L ++++SCA + A +  + IH  V  +G   
Sbjct: 495 SYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLEC 554

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           ++ + +A++D Y KCG +  AR  FD S    DV+ +N +I  Y  HG   +A+++F  M
Sbjct: 555 DLSICTALVDMYMKCGQLGIARKMFD-SMLERDVVTWNVMISGYGMHGEAIQALKLFSMM 613

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +  N++P+  TF++++SAC H GLVDKG  LF  M+ +Y ++P+   Y C+VD+L ++G+
Sbjct: 614 ERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRME-EYSLEPNLKHYACMVDLLGKSGH 672

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L++A+ V+  MP +P   ++ +LL  C++H N E+G   ++K     P+ND  ++L+S
Sbjct: 673 LQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMS 730



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 142/588 (24%), Positives = 255/588 (43%), Gaps = 10/588 (1%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTN---DIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S +  L +  +G  VH + V+ G       + + ++L+ MY++CG     +R+FDEM ER
Sbjct: 115 SAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER 174

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN----GFMPNEFAVGSVMKVCVSMGASEFG 164
           ++V+WT ++S  + NG+   GL   V M  +    G  PN   + S ++ C  +G    G
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H F +K  +   P V  S+ + Y K      A  +F  +   D+  W ++IG Y   
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  +A+ +   M   G+  D+      L G    A    G+  H  I+R     S+ I 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NALI MY K   +D A  VF  +  +D  SW+++   + +     +   L+ +       
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 345 P---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
               +  +   ++  C +L  L LG    C ++     +  +V ++LI M+ RCG  ++A
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +F  V  K++ TW+ L+S Y       D L  +  +   GV+ N  T   V+ +C   
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANL 534

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +    IH  +   G      IC++L+  Y+  GQL  + +  +     D+ +W  M+
Sbjct: 535 AALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMI 594

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S     G   +A+ +F  +     KP+      IL++C   G   + + +   + +    
Sbjct: 595 SGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLE 654

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             +   + ++D   K G ++ A           D  ++ TL+ A   H
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMH 702



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 174/337 (51%), Gaps = 5/337 (1%)

Query: 37  DSFLRKDPIFLAKSLS-LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +S L+ D + ++  L+ L  + K R  G   H  IV+  F + + + N LI+MY+KC   
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRG-GKTFHAAIVRRNFGDSVLIGNALISMYAKCKQV 367

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK---TNGFMPNEFAVGSVM 152
                VF  + +R+  SW+ +V A  + G     L++Y +M+    + F  +  ++ S++
Sbjct: 368 DIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISII 427

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
             C  +G    G S HC+++K    +N  V  ++++ Y + G+   A ++F  + + DV 
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W+A+I  Y+H G+  +AL +   ML EG+  +  T ++ +  C+ +A  + G  IH  +
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
               +EC +SI  AL+DMY+K   +  A K+F+ M ++DV++WN +  G+  +    Q  
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            LF        +PN +TF  +L  C     +D G +L
Sbjct: 608 KLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGREL 644



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 155/343 (45%), Gaps = 8/343 (2%)

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D   WN+L        +   T S   +   SG+RP+  T  ++     +L  L +G  + 
Sbjct: 71  DAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVH 130

Query: 371 CLALHCGFLDEEN---VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG-YCFN 426
             ++  G L+ +    V SSL+YM+ RCG+V  A  +FD +  +++  W  ++SG  C  
Sbjct: 131 AYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNG 190

Query: 427 CCDAD---VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
            C      +++   +  + G   N  T    +E C       +   +HG  +K G   C 
Sbjct: 191 QCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCP 250

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + SSL   Y      +++          D+ SW +++ A    GH  +AV +F  + E+
Sbjct: 251 SVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PDE ++  +L         +  K+ H  +++  F   V + +A+I  YAKC  +  A
Sbjct: 311 GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIA 370

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
              F +  +  D   ++++++AY   GL  + +E++ +M+  +
Sbjct: 371 ATVF-RMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRD 412



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG   H + +K     +  + N LI+MY +CG F    ++F  +  +++V+W+ ++S+  
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G     L +Y  M T G  PN   + SV+  C ++ A E G  IH     + +E +  
Sbjct: 498 HLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLS 557

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G +  A ++F S+   DV  WN MI GY   G   +AL + S M    
Sbjct: 558 ICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGN 617

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF+  L  C      D GR++   +    +E ++     ++D+  KS  +  A 
Sbjct: 618 VKPNSLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAE 677

Query: 302 KVFERMA-DKDVISWNTLFGGFSENKN 327
            V   M  + D   W TL G    + N
Sbjct: 678 DVVSAMPIEPDGGIWGTLLGACKMHDN 704


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 170/569 (29%), Positives = 293/569 (51%), Gaps = 3/569 (0%)

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFIN 251
           LG VA   ++F  +S  D+  +N +I G++  G    ++ + + +  +  +  D +T+  
Sbjct: 59  LGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAF 118

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           A+   S + D  +G  +H   I   V  ++ + +A++D+Y K +  + A KVF+ M ++D
Sbjct: 119 AISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERD 178

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            + WNT+  GFS N     +  +F   +  G   +  T + +L    +L +  LG+ +QC
Sbjct: 179 TVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQC 238

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           LA   G   +  V + LI ++ +CG       +FD +   ++ ++N ++SGY FN     
Sbjct: 239 LASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETES 298

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            +  F  +  SG  VN  T   ++       + Q+   I    +K G      + ++L  
Sbjct: 299 AVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTT 358

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y    ++  + +  + +    +ASW AM+S     G    A+++F  ++     P+   
Sbjct: 359 VYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVT 417

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           + +IL++CA +GA    K +H  +      + VYV++A++D YAKCG I  AR  FD   
Sbjct: 418 VTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMV 477

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           + N V+ +N +I  Y  HG   EA+++F +M  + + P+  TF+S++ ACSH GLV +G 
Sbjct: 478 DKN-VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGN 536

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
            +F SM + YG QP  + Y C+VD+L R G L +A   IE MP +P P V+ +LL  C I
Sbjct: 537 EIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMI 596

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           H N E+   AS++L  L P+N   +VLLS
Sbjct: 597 HKNTEMANVASKRLFQLDPENVGYYVLLS 625



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 230/494 (46%), Gaps = 10/494 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D    A ++S +  L+   +G  +H H +  G  +++F+ + ++ +Y K        
Sbjct: 109 LRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELAR 168

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD M ER+ V W  ++S   +N  F+  ++++VDM   G   +   + +V+     + 
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  I C A K  +  + +V   +++ Y+K G       +F  I   D+  +NAMI 
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY        A+ +   +L  G  ++  T +  +          + R I  L ++  +  
Sbjct: 289 GYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIIL 348

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
             S+  AL  +Y + + + +A ++F+   +K + SWN +  G+++N    +  SLF + +
Sbjct: 349 QPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMM 408

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
              S PN VT + +L  C +L  L +G  +  L           V+++L+ M+ +CG++ 
Sbjct: 409 PQLS-PNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIV 467

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +FD +  KN+ TWN +++GY  +    + LK F  + +SG+   G TF  ++  C 
Sbjct: 468 EARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACS 527

Query: 460 RSENQQMVGQI-HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM---- 514
            S       +I H      GF       + ++      GQL N+ EF    ER+ +    
Sbjct: 528 HSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEF---IERMPLEPGP 584

Query: 515 ASWGAMMSA-LVHQ 527
           A WGA++ A ++H+
Sbjct: 585 AVWGALLGACMIHK 598



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/637 (20%), Positives = 262/637 (41%), Gaps = 23/637 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   ++  G   D+     L   +   G      ++F+++++ +L  + +++     NG
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                + +Y  + K     P+ F     +     +     G  +H  ++   +  N FVG
Sbjct: 92  LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVDGVASNLFVG 151

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++++ Y K      A +VF  +   D   WN MI G++   Y  +++ V   ML  G++
Sbjct: 152 SAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLS 211

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T    L   + + ++ +G  I  L  +  +   + ++  LI +Y K         +
Sbjct: 212 FDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRIL 271

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+++   D+IS+N +  G++ N       +LF + + SG R N  T   L+        L
Sbjct: 272 FDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHL 331

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            L   +Q L+L  G + + +V+++L  ++CR   V+ A  +FD    K++ +WN ++SGY
Sbjct: 332 QLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGY 391

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      +  F  +    +  N  T   ++  C +     +   +HG I      S  
Sbjct: 392 TQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNV 450

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ ++L+  Y   G +  + +  +     ++ +W AM++     GH  EA+ +F+ ++++
Sbjct: 451 YVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQS 510

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           G  P      +IL +C+  G       I H      GF       + ++D   + G +  
Sbjct: 511 GIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTN 570

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS--- 659
           A    ++        V+  L+ A   H   +  M      +L  L P    +  ++S   
Sbjct: 571 ALEFIERMPLEPGPAVWGALLGACMIHK--NTEMANVASKRLFQLDPENVGYYVLLSNIY 628

Query: 660 --------ACSHKGLVDK-------GCLLFKSMDSQY 681
                   A S + +V K       GC L +  D QY
Sbjct: 629 STDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQY 665



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 159/321 (49%), Gaps = 1/321 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L  D   LA  L+    L+   LG  +     K G  +D+++   LI++YSKCG   
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
            G  +FD++ + +L+S+  ++S    N E +  + ++ ++  +G   N   +  ++ V +
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
                +    I   +LKI I   P V  ++   Y +L +V  A ++F       +  WNA
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GY   G    A+++   M+ + ++ +  T  + L  C+ +    IG+ +HGLI    
Sbjct: 387 MISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +E ++ +  AL+DMY K   +  A ++F+ M DK+V++WN +  G+  + +  +   LF+
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 337 KFILSGSRPNHVTFSILLRQC 357
           + + SG  P  VTF  +L  C
Sbjct: 506 EMLQSGIPPTGVTFLSILYAC 526


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 301/580 (51%), Gaps = 9/580 (1%)

Query: 185 SVLNFYAKLGDVAA---AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV-VSSMLFE 240
           +V     KL DV A   A  +F+S+   D+  +N +I G++   +  +A ++   + L +
Sbjct: 42  TVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFS---FSPDASSISFYTHLLK 98

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
             T+    F  A    S   D ++G  +H   +    + ++ + +AL+D+Y K S + YA
Sbjct: 99  NTTLSPDNFTYAF-AISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYA 157

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF++M D+D + WNT+  G   N     +  +F   +  G R +  T + +L    ++
Sbjct: 158 RKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEM 217

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            ++ +G+ +QCLAL  GF  ++ V + LI +F +C  V+ A  +F  +   ++ ++N L+
Sbjct: 218 QEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALI 277

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+  N      +K F  +  SG  V+  T   ++       +  +   I G  +K+G  
Sbjct: 278 SGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTI 337

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L   Y    ++D + +  + +    +A+W AM+S     G    A+++F  +
Sbjct: 338 LQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEM 397

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +     P+   + +IL++CA +GA    KS+H  +        +YV++A+ID YAKCG+I
Sbjct: 398 MTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNI 457

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             A   FD +   N V  +NT+I  Y  HG   EA+++F++M     QPS  TF+SV+ A
Sbjct: 458 SEASQLFDLTSEKNTV-TWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYA 516

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV +G  +F +M ++Y ++P  + Y C+VD+L R G LE A   I  MP +P P 
Sbjct: 517 CSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPA 576

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+ +LL  C IH +  L   ASE+L  L P N   +VLLS
Sbjct: 577 VWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLS 616



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 218/472 (46%), Gaps = 3/472 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  +H H V  GF +++F+ + L+ +Y K     +  +VFD+M +R+ V W  +++  +
Sbjct: 121 LGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLV 180

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N  +D  ++++ DM   G   +   V +V+     M   + G  I C ALK+    + +
Sbjct: 181 RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY 240

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   +++ ++K  DV  A  +F  I   D+  +NA+I G++  G    A+     +L  G
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             +   T +  +   S      +   I G  ++S      S+  AL  +Y + + +D A 
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLAR 360

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+  ++K V +WN +  G++++       SLF + + +   PN VT + +L  C +L 
Sbjct: 361 QLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG 420

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G  +  L           V+++LI M+ +CG +  A  +FD  S KN  TWN ++ 
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIF 480

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI-HGAIIKTGFS 480
           GY  +    + LK F  +   G + +  TF  V+  C  +   +   +I H  + K    
Sbjct: 481 GYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIE 540

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHN 530
                 + ++      GQL+ + EF          A WG ++ A ++H+  N
Sbjct: 541 PLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTN 592



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 152/318 (47%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +A  L     ++   +G  +    +KLGF  D ++   LI+++SKC       
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTAR 259

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  + + +LVS+  ++S    NGE +  +K + ++  +G   +   +  ++ V    G
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG 319

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  I  F +K      P V  ++   Y++L ++  A ++F   S   V  WNAMI 
Sbjct: 320 HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G    A+++   M+    T +  T  + L  C+ +     G+ +H LI    +E 
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQ 439

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +I +  ALIDMY K   +  A ++F+  ++K+ ++WNT+  G+  +    +   LF++ +
Sbjct: 440 NIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEML 499

Query: 340 LSGSRPNHVTFSILLRQC 357
             G +P+ VTF  +L  C
Sbjct: 500 HLGFQPSSVTFLSVLYAC 517



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P+ +   LS    L +   G  VH  I       +I++   LI MY+KCG      ++F
Sbjct: 405 NPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF 464

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D  +E+N V+W  ++     +G  D  LK++ +M   GF P+     SV+  C   G   
Sbjct: 465 DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVR 524

Query: 163 FGYSI-HCFALKIRIE 177
            G  I H    K RIE
Sbjct: 525 EGDEIFHAMVNKYRIE 540


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  298 bits (764), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 189/619 (30%), Positives = 315/619 (50%), Gaps = 15/619 (2%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K C   G  + G  IH F+          V  +V+  Y K G    A  +F ++   DV
Sbjct: 10  LKAC--RGDLKRGCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDV 67

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN ++ G+        ALN V  M   G+  D +T+  AL  C     F +G Q+   
Sbjct: 68  VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQST 124

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +++S +E  + + N+ I MY +S     A +VF+ M  KD+ISWN+L  G S+    G  
Sbjct: 125 VVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFE 184

Query: 332 ASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           A L F   +  G   +HV+F+ ++  C    DL L  Q+  L +  G+     V + L+ 
Sbjct: 185 AVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 244

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
            + +CG +E   SVF  +S +N+ +W  ++S         D +  F N+   GV  N  T
Sbjct: 245 RYSKCGVLEAVKSVFYQMSERNVVSWTTMISSN-----RDDAVSIFLNMRLDGVYPNEVT 299

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++     +E  +   +IHG  IKTGF S   + +S I  Y  F  L+++ +  +   
Sbjct: 300 FVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDIT 359

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--AYQRT 568
             ++ SW AM+S     G +HEA+ +F S   A   P+EY  G++LN+ A     + +  
Sbjct: 360 FREIISWNAMISGFAQNGFSHEALKMFLS-ATAETMPNEYTFGSVLNAIAFAEDISVKHG 418

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           +  H  ++KLG N+   V+SA++D YAK G+I  +   F++    N   V+ ++I AY+ 
Sbjct: 419 QRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQ-FVWTSIISAYSS 477

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG  +  M +F +M   N+ P   TF+SV++AC+ KG+VDKG  +   M   Y ++PS +
Sbjct: 478 HGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHE 537

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C+VDML R G L++A+ ++  +P  P  ++ +S+L  CR+HGN ++G   +E  + +
Sbjct: 538 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 597

Query: 749 LPKNDAAHVLLSKRKRQRE 767
            P+   ++V +     ++E
Sbjct: 598 KPELSGSYVQMYNIYAEKE 616



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 265/548 (48%), Gaps = 17/548 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG     GFT+ + + N ++ MY K G F   L +F+ + + ++VSW  I+S    
Sbjct: 20  GCQIHGFSTTCGFTSFVCVSNAVMGMYRKAGRFDNALYIFENLVDPDVVSWNTILSGFDD 79

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N    + L   V MK+ G + + F   + +  CV       G  +    +K  +E +  V
Sbjct: 80  N---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVV 136

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEG 241
           G S +  Y++ G    A RVF  +   D+  WN+++ G +  G +GFEA+ +   M+ EG
Sbjct: 137 GNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREG 196

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  +F + +  C    D  + RQIHGL I+   E  + + N L+  Y K   ++   
Sbjct: 197 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 256

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF +M++++V+SW T+      + N     S+F    L G  PN VTF  LL       
Sbjct: 257 SVFYQMSERNVVSWTTMI-----SSNRDDAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNE 311

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  GL++  L +  GF+ E +V +S I M+ +  A+E A   FD+++++ I +WN ++S
Sbjct: 312 QIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMIS 371

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV-GQ-IHGAIIKTGF 479
           G+  N    + LK F +     +  N  TF  V+     +E+  +  GQ  H  ++K G 
Sbjct: 372 GFAQNGFSHEALKMFLSATAETMP-NEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGL 430

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +SC  + S+L+  Y   G ++ S +  N   + +   W +++SA    G  +  + +FH 
Sbjct: 431 NSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHE 490

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDAYAK 596
           +++    PD     ++L +C   G   +   I   +I+   L  + E Y  S ++D   +
Sbjct: 491 MIKENVAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHY--SCMVDMLGR 548

Query: 597 CGDIKGAR 604
            G +K A 
Sbjct: 549 AGRLKEAE 556



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 137/550 (24%), Positives = 241/550 (43%), Gaps = 47/550 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+   +VK G  +D+ + N+ I MYS+ G F    RVFDEM  ++++SW  ++S   
Sbjct: 117 LGLQLQSTVVKSGLESDLVVGNSFITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLS 176

Query: 122 QNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           Q G F    + ++ DM   G   +  +  SV+  C      +    IH   +K   E   
Sbjct: 177 QEGTFGFEAVLIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 236

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG  +++ Y+K G + A + VFY +S  +V  W  MI          +A+++  +M  +
Sbjct: 237 EVGNILMSRYSKCGVLEAVKSVFYQMSERNVVSWTTMISSNRD-----DAVSIFLNMRLD 291

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  ++ TF+  L           G +IHGL I++      S+ N+ I MY K   ++ A
Sbjct: 292 GVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDA 351

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K F+ +  +++ISWN +  GF++N    +   +F     + + PN  TF  +L      
Sbjct: 352 KKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLS-ATAETMPNEYTFGSVLNAIAFA 410

Query: 361 LDLDLGLQLQCLA--LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            D+ +    +C A  L  G      V+S+L+ M+ + G +  +  VF+ +S +N   W  
Sbjct: 411 EDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEMSQRNQFVWTS 470

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S Y  +     V+  F  + +  V  +  TF  V+  C R   + MV + H       
Sbjct: 471 IISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNR---KGMVDKGH------- 520

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                 I + +I+ Y     L+ S E            +  M+  L   G   EA  +  
Sbjct: 521 -----EILNMMIEDY----NLEPSHE-----------HYSCMVDMLGRAGRLKEAEEL-- 558

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-----GFNTEVYVASAVIDA 593
            + E    P E +L ++L SC   G  +    +    +++     G   ++Y   A  + 
Sbjct: 559 -MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEQ 617

Query: 594 YAKCGDIKGA 603
           + K  +I+ A
Sbjct: 618 WDKAAEIRKA 627


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 177/619 (28%), Positives = 317/619 (51%), Gaps = 3/619 (0%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKI--RIEKNPFVGCSVLNFYAKLGDVAAAER 201
           + +A    ++ C++ G +  G ++H   ++     + + F    +LNFYAKLG +A A R
Sbjct: 44  DSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARR 103

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           +F  +   +   +  ++ GYA  G   EAL +   +  EG  ++ +     L+    +  
Sbjct: 104 LFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDA 163

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
             +   IH    +   + +  +  ALID Y     + +A  VF+ +  KD ++W  +   
Sbjct: 164 PGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSC 223

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +SEN  P    + F K  ++G +PN    +  L+    L    LG  +   ++   +  E
Sbjct: 224 YSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTE 283

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            +V  +L+ M+ +CG +E AH++F+ + + ++  W+ L+S Y  +C +    + F  +  
Sbjct: 284 PHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMR 343

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           S V  N  +   V++ C      ++  QIH   IK G+ S  ++ ++L+  Y     ++N
Sbjct: 344 SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMEN 403

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S E  +  +  +  SW  ++      G   +A+++FH +  A     +    ++L +CA 
Sbjct: 404 SLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACAN 463

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
             + +    IH  + K  FN +  V +++ID YAKCG I+ A   F +S    DV+ +N+
Sbjct: 464 TSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVF-ESIVECDVVSWNS 522

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I AYA HG  + A+E+FD+M  ++++ +  TFVS++S C   GLV++G  LF SM   +
Sbjct: 523 IISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDH 582

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
            ++PS + Y C+V +L R G L DA   I  +P  PSP V+R+LLS C +H N  LG +A
Sbjct: 583 RIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYA 642

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +EK+L + P ++  +VLLS
Sbjct: 643 AEKVLDIEPHDETTYVLLS 661



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 157/621 (25%), Positives = 298/621 (47%), Gaps = 10/621 (1%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  VH  +V+ G     D F  N L+  Y+K G      R+FD M ERN VS+  ++   
Sbjct: 64  GRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGY 123

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
              GEF+  L+++  ++  G   N F + +++KV V+M A      IH  A K+  ++N 
Sbjct: 124 ALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNA 183

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG ++++ Y+  G V  A  VF  I   D   W AM+  Y+       ALN  S M   
Sbjct: 184 FVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMT 243

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +   +AL+    ++   +G+ IHG  +++  +    +  AL+DMY K   ++ A
Sbjct: 244 GFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDA 303

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +FE +   DVI W+ L   ++++    Q   +F + + S   PN  + S +L+ C  +
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+LG Q+  LA+  G+  E  V ++L+ M+ +C  +E +  +F ++   N  +WN ++
Sbjct: 364 AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTII 423

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GYC +    D L  F  +  + +     TF  V+  C  + + +   QIH  I K+ F+
Sbjct: 424 VGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFN 483

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   +C+SLI +Y   G + ++ +        D+ SW +++SA    G    A+ +F  +
Sbjct: 484 NDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRM 543

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKC 597
            ++  K ++    ++L+ C + G   +   +   ++   ++  + E Y  + ++    + 
Sbjct: 544 NKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHY--TCIVRLLGRA 601

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVS 656
           G +  A        ++   +V+  L+ +   H  V  A+  +   K+ +++P  + T+V 
Sbjct: 602 GRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNV--ALGRYAAEKVLDIEPHDETTYVL 659

Query: 657 VMSACSHKGLVDKGCLLFKSM 677
           + +  +  G++D+  L  KSM
Sbjct: 660 LSNMYAAAGILDEVALWRKSM 680



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 199/397 (50%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           L   +H    KLG   + F+   LI  YS CG       VFD +  ++ V+WT +VS   
Sbjct: 166 LACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYS 225

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N   +  L  +  M+  GF PN F + S +K  V + ++  G  IH  ++K   +  P 
Sbjct: 226 ENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPH 285

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++L+ YAK GD+  A  +F  I  DDV  W+ +I  YA      +A  +   M+   
Sbjct: 286 VGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSF 345

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++++    LQ C+ +A  ++G QIH L I+   E  + + NAL+DMY K   M+ + 
Sbjct: 346 VVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSL 405

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F  + D + +SWNT+  G+ ++       S+FH+   +      VTFS +LR C    
Sbjct: 406 EIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTS 465

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +   +Q+  L     F ++  V +SLI  + +CG +  A  VF+++   ++ +WN ++S
Sbjct: 466 SIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIIS 525

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            Y  +    + L+ F  + +S ++ N  TF  ++  C
Sbjct: 526 AYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVC 562



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/495 (24%), Positives = 231/495 (46%), Gaps = 11/495 (2%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKSSGMDYAF 301
           +D Y     LQ C    D   GR +H  +++     +      N L++ Y K   +  A 
Sbjct: 43  LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+ M +++ +S+ TL  G++      +   LF +    G   NH   + +L+    L+
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKV---LV 159

Query: 362 DLDL-GLQLQCLALHCGFLDEEN--VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +D  GL     A  C    + N  V ++LI  +  CGAV  A  VFD +  K+  TW  
Sbjct: 160 TMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTA 219

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S Y  N      L TF  +  +G + N       ++      +  +   IHG  +KT 
Sbjct: 220 MVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTL 279

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           + +  ++  +L+  Y   G ++++          D+  W  ++S       N +A  +F 
Sbjct: 280 YDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFL 339

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            ++ +   P+E+ L  +L +CA I   +  + IH   IKLG+ +E++V +A++D YAKC 
Sbjct: 340 RMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR 399

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           +++ +   F    ++N+V  +NT+I+ Y   G   +A+ +F +M+ A++  +Q TF SV+
Sbjct: 400 NMENSLEIFSSLQDANEV-SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVL 458

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            AC++   +     +   ++       +  C   L+D  ++ G++ DA  V E +  +  
Sbjct: 459 RACANTSSIKHAVQIHSLIEKSTFNNDTIVC-NSLIDTYAKCGFIRDALKVFESI-VECD 516

Query: 719 PTVYRSLLSGCRIHG 733
              + S++S   +HG
Sbjct: 517 VVSWNSIISAYALHG 531



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 185/388 (47%), Gaps = 12/388 (3%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + +P  L  +L  +  L S +LG  +HG  VK  +  +  +   L+ MY+KCG       
Sbjct: 246 KPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHA 305

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F+ +   +++ W+ ++S   Q+ + +   +M++ M  +  +PNEF++  V++ C ++  
Sbjct: 306 IFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAF 365

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  IH  A+K+  E   FVG ++++ YAK  ++  +  +F S+   +   WN +I G
Sbjct: 366 LELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVG 425

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G+  +AL+V   M    +   + TF + L+ C+  +      QIH LI +S     
Sbjct: 426 YCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNND 485

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + N+LID Y K   +  A KVFE + + DV+SWN++   ++ +        LF +   
Sbjct: 486 TIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNK 545

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------R 394
           S  + N VTF  LL  CG       GL  Q L L    + +  +  S+ +  C      R
Sbjct: 546 SDIKANDVTFVSLLSVCGS-----TGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGR 600

Query: 395 CGAVEMAHSVFDNV-SYKNITTWNELLS 421
            G +  A     ++ S  +   W  LLS
Sbjct: 601 AGRLTDALKFIGDIPSTPSPMVWRALLS 628



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 105/219 (47%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           SF+  +   L+  L    N+    LG Q+H   +KLG+ +++F+ N L+ MY+KC     
Sbjct: 344 SFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMEN 403

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L +F  + + N VSW  I+    Q+G  +  L ++ +M+    +  +    SV++ C +
Sbjct: 404 SLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACAN 463

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
             + +    IH    K     +  V  S+++ YAK G +  A +VF SI   DV  WN++
Sbjct: 464 TSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSI 523

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
           I  YA  G    AL +   M    I  +  TF++ L  C
Sbjct: 524 ISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVC 562



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDI 600
           A  K D Y     L  C A G  +  +++H  V++ G     + + A+ +++ YAK G +
Sbjct: 39  ALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPL 98

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             AR  FD     N V  + TL+  YA  G   EA+E+F +++
Sbjct: 99  ATARRLFDGMPERNRV-SFVTLMQGYALRGEFEEALELFRRLQ 140


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 168/611 (27%), Positives = 314/611 (51%), Gaps = 2/611 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+++C    + E G  +H   +   I  +  +G  ++  Y   GD+    ++F  I +D
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            V  WN ++  YA  G   E++++   M   G+  + YTF   L+  + +      +++H
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G +++     + ++VN+LI  Y K  G++ A  +F+ +++ DV+SWN++  G   N   G
Sbjct: 494 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               +F + ++ G   +  T   +L     + +L LG  L    +   F +E   +++L+
Sbjct: 554 NGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 613

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A  VF  +    I +W   ++ Y      +D +  F  +   GV  +  
Sbjct: 614 DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   +V  C  S +      +H  +IK G  S   + ++LI  Y   G ++ +    +  
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  M+         +EA+ +F  + +   KPD+  +  +L +CA + A  + +
Sbjct: 734 PVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGR 792

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH  +++ G+ ++++VA A++D YAKCG +  A++ FD      D+I +  +I  Y  H
Sbjct: 793 EIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDM-IPKKDLISWTVMIAGYGMH 851

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G  +EA+  F++M++A ++P +++F  +++ACSH GL+++G   F SM ++ G++P  + 
Sbjct: 852 GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 911

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L+R G L  A   IE MP +P  T++  LLSGCRIH + +L E  +E +  L 
Sbjct: 912 YACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELE 971

Query: 750 PKNDAAHVLLS 760
           P N   +V+L+
Sbjct: 972 PDNTRYYVVLA 982



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 169/680 (24%), Positives = 298/680 (43%), Gaps = 31/680 (4%)

Query: 8   FLFADKP--SCHFHAT-------RKRIHRLCGN-----NQFCSDSFLRKDPIFLAKS--- 50
           F+F  +P  +C  H+T           H +  N     N+FC    LR     L KS   
Sbjct: 306 FIFFKQPRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSY 365

Query: 51  ----------LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
                     L L    KS   G +VH  I+  G + D  L   L+ MY  CG    G +
Sbjct: 366 ELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRK 425

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD++    +  W L++S   + G F   + ++  M+  G + N +    V+K   ++G 
Sbjct: 426 IFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGK 485

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +    +H + LK+    N  V  S++  Y K G V +A  +F  +S  DV  WN+MI G
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
               G+    L +   ML  G+ +D  T ++ L   + + +  +GR +HG  +++     
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE 605

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +   N L+DMY K   ++ A +VF +M D  ++SW +    +           LF +   
Sbjct: 606 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RP+  T + ++  C     LD G  +    +  G      VT++LI M+ +CG+VE 
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF  +  K+I +WN ++ GY  N    + L+ F ++ +   + +  T   V+  C  
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAG 784

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   +IHG I++ G+ S  ++  +L+  Y   G L  +    +   + D+ SW  M
Sbjct: 785 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 844

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLG 579
           ++     G  +EA++ F+ +  AG +PDE     ILN+C+  G      K  +    + G
Sbjct: 845 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECG 904

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              ++   + V+D  A+ G++  A    +      D  ++  L+     H  V  A ++ 
Sbjct: 905 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 964

Query: 640 DKMKLANLQPSQATFVSVMS 659
           +   +  L+P    +  V++
Sbjct: 965 E--HIFELEPDNTRYYVVLA 982


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  298 bits (764), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 177/598 (29%), Positives = 314/598 (52%), Gaps = 2/598 (0%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G S+HC  LK     + F    +LN Y   G +  A ++F  +   +   +  +  G++ 
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 A  ++  +  EG  ++++ F   L+    +   D    +H  + +   +    +
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             ALID Y     +D A +VF+ +  KD++SW  +   ++EN     +  LF +  + G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RPN+ T S  L+ C  L    +G  +   AL   +  +  V  +L+ ++ + G +  A  
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYVVETCCRSE 462
            F+ +   ++  W+ ++S Y  +    + L+ FC + +S V V N  TF  V++ C    
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
              +  QIH  ++K G  S  ++ ++L+  Y   G+++NS +   G+   +  +W  ++ 
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
             V  G   +A+ +F +++    +P E    ++L + A++ A +  + IH   IK  +N 
Sbjct: 382 GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNK 441

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +  VA+++ID YAKCG I  AR+ FD+  +  D + +N LI  Y+ HGL  EA+ +FD M
Sbjct: 442 DSVVANSLIDMYAKCGRIDDARLTFDK-MDKQDEVSWNALICGYSIHGLGMEALNLFDMM 500

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           + +N +P++ TFV V+SACS+ GL+DKG   FKSM   YG++P  + Y C+V +L R+G 
Sbjct: 501 QQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQ 560

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++A  +I  +PFQPS  V+R+LL  C IH N +LG+  ++++L + P++DA HVLLS
Sbjct: 561 FDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLS 618



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/509 (25%), Positives = 250/509 (49%), Gaps = 1/509 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H HI+K G + D+F QN L+  Y   G+     ++FDEM   N VS+  +     +
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +F    ++ + +   G+  N+F   +++K+ VSM  ++   S+H +  K+  + + FV
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y+  G+V AA +VF  I   D+  W  M+  YA      ++L +   M   G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + +T   AL+ C+ +  F +G+ +HG  ++   +  + +  AL+++Y KS  +  A +
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLL 361
            FE M   D+I W+ +   ++++    +   LF +   S    PN+ TF+ +L+ C  L+
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+LG Q+    L  G      V+++L+ ++ +CG +E +  +F   + KN   WN ++ 
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY         L  F N+    ++    T+  V+         +   QIH   IKT ++ 
Sbjct: 382 GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNK 441

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SLI  Y   G++D++    +  ++ D  SW A++      G   EA+ +F  + 
Sbjct: 442 DSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQ 501

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           ++  KP++     +L++C+  G   + ++
Sbjct: 502 QSNSKPNKLTFVGVLSACSNAGLLDKGRA 530



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 245/500 (49%), Gaps = 22/500 (4%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           MD +++ N LQ      D + G+ +H  I++      +   N L++ Y+    ++ A K+
Sbjct: 1   MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M   + +S+ TL  GFS +    +   L  +    G   N   F+ LL+     L +
Sbjct: 61  FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLK-----LLV 115

Query: 364 DLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            + L   CL++H      G   +  V ++LI  +  CG V+ A  VFD + +K++ +W  
Sbjct: 116 SMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTG 175

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +++ Y  N C  D L  FC +   G   N  T    +++C   E  ++   +HG  +K  
Sbjct: 176 MVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVC 235

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           +    Y+  +L++ Y   G++  + +F     + D+  W  M+S       + EA+ +F 
Sbjct: 236 YDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFC 295

Query: 539 SLVEAG-EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            + ++    P+ +   ++L +CA++        IH  V+K+G ++ V+V++A++D YAKC
Sbjct: 296 RMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKC 355

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G+I+ +   F  S   N+V  +NT+I+ Y   G   +A+ +F  M   ++QP++ T+ SV
Sbjct: 356 GEIENSVKLFTGSTEKNEV-AWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSV 414

Query: 658 MSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           + A +    ++ G     L  K+M ++  +  +      L+DM ++ G ++DA+   + M
Sbjct: 415 LRASASLVALEPGRQIHSLTIKTMYNKDSVVANS-----LIDMYAKCGRIDDARLTFDKM 469

Query: 714 PFQPSPTVYRSLLSGCRIHG 733
             Q   + + +L+ G  IHG
Sbjct: 470 DKQDEVS-WNALICGYSIHG 488



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 196/387 (50%), Gaps = 4/387 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R +   ++ +L     L++  +G  VHG  +K+ +  D+++   L+ +Y+K G      +
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMG 159
            F+EM + +L+ W+L++S   Q+ +    L+++  M+ +  + PN F   SV++ C S+ 
Sbjct: 262 FFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLV 321

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH   LK+ ++ N FV  ++++ YAK G++  + ++F   +  +   WN +I 
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G G +ALN+ S+ML   I   + T+ + L+  + +   + GRQIH L I++    
Sbjct: 382 GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNK 441

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
              + N+LIDMY K   +D A   F++M  +D +SWN L  G+S +    +  +LF    
Sbjct: 442 DSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQ 501

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
            S S+PN +TF  +L  C     LD G    + +    G        + ++++  R G  
Sbjct: 502 QSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQF 561

Query: 399 EMAHSVFDNVSYK-NITTWNELLSGYC 424
           + A  +   + ++ ++  W  LL G C
Sbjct: 562 DEAVKLIGEIPFQPSVMVWRALL-GAC 587


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 172/571 (30%), Positives = 296/571 (51%), Gaps = 16/571 (2%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           + + G +  A  +F  ++  D   WN +I GY + G   EA++    M  EGI  D +TF
Sbjct: 68  FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTF 127

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              ++ C  +    +G+++HG +I+   +  + + N LIDMY+K   ++ A KVF+ M  
Sbjct: 128 PFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPV 187

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +D++SWN++  G+  + +   +   F + +  G++ +       L  C     L  G+++
Sbjct: 188 RDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEI 247

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
            C  +      +  V +SLI M+ +CG V+ A  VF+ +  KNI  WN ++ G       
Sbjct: 248 HCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQ----- 302

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
                      +  V  +  T   ++ +C +S        IHG  I+  F     + ++L
Sbjct: 303 ----------EDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETAL 352

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G+L  +    N     +M SW  M++A V      EA+ +F  ++    KPD 
Sbjct: 353 VDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDA 412

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             + ++L + A + +    K IH +++KLG  +  ++++A++  YAKCGD++ AR  FD 
Sbjct: 413 ITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFD- 471

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
                DV+ +NT+IMAYA HG    +++ F +M+    +P+ +TFVS+++ACS  GL+D+
Sbjct: 472 GMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDE 531

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G   F SM  +YG+ P  + YGC++D+L RNG L++AK  IE MP  P+  ++ SLL+  
Sbjct: 532 GWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAAS 591

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           R H +  L E A+  +L L   N   +VLLS
Sbjct: 592 RNHNDVVLAELAARHILSLKHDNTGCYVLLS 622



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 145/561 (25%), Positives = 261/561 (46%), Gaps = 17/561 (3%)

Query: 73  LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
           L   ND+ +  +L   + + G  G  L +F++M   +   W +I+     NG F   +  
Sbjct: 53  LARPNDLNITRDLCG-FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDF 111

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           Y  M+  G   + F    V+K C  + A   G  +H   +KI  + + +V   +++ Y K
Sbjct: 112 YYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLK 171

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
           +G +  AE+VF  +   D+  WN+M+ GY   G G  +L     ML  G   D++  I+A
Sbjct: 172 IGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISA 231

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  CS+      G +IH  +IRSE+E  I +  +LIDMY K   +DYA +VF R+  K++
Sbjct: 232 LGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNI 291

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ++WN + GG  E+           K I     P+ +T   LL  C +   L  G  +   
Sbjct: 292 VAWNAMIGGMQEDD----------KVI-----PDVITMINLLPSCSQSGALLEGKSIHGF 336

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A+   FL    + ++L+ M+ +CG +++A  VF+ ++ KN+ +WN +++ Y  N    + 
Sbjct: 337 AIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEA 396

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           LK F +I    ++ +  T   V+       ++    QIH  I+K G  S  +I ++++  
Sbjct: 397 LKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYM 456

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L  + EF +G    D+ SW  M+ A    G    ++  F  +   G KP+    
Sbjct: 457 YAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTF 516

Query: 553 GTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
            ++L +C+  G         +   ++ G +  +     ++D   + G++  A+   ++  
Sbjct: 517 VSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMP 576

Query: 612 NSNDVIVYNTLIMAYAHHGLV 632
                 ++ +L+ A  +H  V
Sbjct: 577 LVPTARIWGSLLAASRNHNDV 597



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 195/402 (48%), Gaps = 15/402 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L + ++G +VHG ++K+GF  D+++ N LI MY K G+     +VFDEM  R+LVSW  +
Sbjct: 137 LLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSM 196

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           VS    +G+    L  + +M   G   + F + S +  C        G  IHC  ++  +
Sbjct: 197 VSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSEL 256

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  V  S+++ Y K G V  AERVF  I S ++  WNAMIGG                
Sbjct: 257 ELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQED------------ 304

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
              + +  D  T IN L  CS       G+ IHG  IR      + +  AL+DMY K   
Sbjct: 305 ---DKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGE 361

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A  VF +M +K+++SWNT+   + +N+   +   +F   +    +P+ +T + +L  
Sbjct: 362 LKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPA 421

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             +L     G Q+    +  G      ++++++YM+ +CG ++ A   FD +  K++ +W
Sbjct: 422 VAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSW 481

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           N ++  Y  +      ++ F  +   G + NG TF  ++  C
Sbjct: 482 NTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTAC 523



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 6/307 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG  ++  F   + L+  L+ MY KCG       VF++M E+N+VSW  +V+A +Q
Sbjct: 330 GKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQ 389

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N ++   LKM+  +      P+   + SV+     + +   G  IH + +K+ +  N F+
Sbjct: 390 NEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFI 449

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  YAK GD+  A   F  +   DV  WN MI  YA  G+G  ++   S M  +G 
Sbjct: 450 SNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGF 509

Query: 243 TMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             +  TF++ L  CS+    D G    + + +   ++  I     ++D+  ++  +D A 
Sbjct: 510 KPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAK 569

Query: 302 KVFERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPN---HVTFSILLRQC 357
              E M        W +L    S N N    A L  + ILS    N   +V  S +  + 
Sbjct: 570 CFIEEMPLVPTARIWGSLLAA-SRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEA 628

Query: 358 GKLLDLD 364
           G+  D+D
Sbjct: 629 GRWEDVD 635



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 47/309 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D I +A  L     L SR  G Q+H +I+KLG  ++ F+ N ++ MY+KCG      
Sbjct: 408 LKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAR 467

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             FD M  +++VSW  ++ A   +G     ++ + +M+  GF PN     S++  C   G
Sbjct: 468 EFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISG 527

Query: 160 ASEFGYSI---------------------------------HCFALKIRIEKNPFVGCSV 186
             + G+                                    CF  ++ +     +  S+
Sbjct: 528 LIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSL 587

Query: 187 LNFYAKLGDVAAAE---RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           L       DV  AE   R   S+  D+ GC+  +   YA  G   +   +   M  +G+ 
Sbjct: 588 LAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLV 647

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
                      GCS+V   DI  +    I +       +++  ++D+ +K  G D     
Sbjct: 648 --------KTVGCSMV---DINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHS 696

Query: 304 FERMADKDV 312
             +    DV
Sbjct: 697 LTKFRPLDV 705


>gi|357153657|ref|XP_003576524.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Brachypodium distachyon]
          Length = 809

 Score =  298 bits (763), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 192/688 (27%), Positives = 340/688 (49%), Gaps = 19/688 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QV+    K G T D ++ + +I + +K G F   L+ F++    + V W  ++S A++N 
Sbjct: 90  QVYCVAWKDGLTGDAYVCSGMIDLLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRND 149

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-FGYSIHCFALKIRIEKNPFVG 183
           +  + + M+ DM      PN F    V+  C +MGA    G ++H   L+   E + FVG
Sbjct: 150 QDRLAIDMFSDMVRGSCEPNSFTYSGVLSAC-AMGAELCVGRAVHGLVLRRDPEYDVFVG 208

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S++N YAK GD+ AA R F+ +   +V  W   I G+        A+ ++  M+  G++
Sbjct: 209 TSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVS 268

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           M+KYT  + L  CS +       Q+HG+I++ E+    ++  ALI  Y     ++ +   
Sbjct: 269 MNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHAVKEALICTYANIGAIELSETA 328

Query: 304 FERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           FE +        W+T   G S +  P ++  L  +    G RPN   ++ +      +  
Sbjct: 329 FEEVGTVSSTRIWSTFISGVSSHSLP-RSLQLLMRMFRQGLRPNDRCYASVF---SSMDS 384

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           ++ G QL  L +  GF+ +  V S+L  M+ R   +E ++ VF  +  ++  +W  +++G
Sbjct: 385 IEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAG 444

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK-----T 477
           +  +    +  + F  +   G + +  T   ++  C + E       IHG I++     T
Sbjct: 445 FASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEIT 504

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
             S C      L+  Y    +   +    +     D   + +M+S     G + EA+++F
Sbjct: 505 SISHC------LVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLF 558

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             ++  G + D +I  +IL+ CA I      K +H   IK G  +++ V+S+++  Y+K 
Sbjct: 559 QLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKS 618

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G++  +R  FD+   S D++ +  +I  YA HG   +A+E+FD M    ++P     VSV
Sbjct: 619 GNLNDSRKVFDE-ITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSV 677

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACS  GLV++G   F+SM + YG++P    Y C+VD+L R+G L+DAK  IE MP + 
Sbjct: 678 LSACSRNGLVEEGVNYFESMRTIYGVEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKA 737

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKL 745
              V+ +L + CR+H +  LG +   K+
Sbjct: 738 DLMVWSTLFAACRVHNDAVLGGFVENKI 765



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 143/607 (23%), Positives = 274/607 (45%), Gaps = 9/607 (1%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L  +V  +  G  P+    G  +  CV  G   F   ++C A K  +  + +V   +++
Sbjct: 53  ALASFVLSRAVGNTPSHLDFGKALAACVGPGHVAFAEQVYCVAWKDGLTGDAYVCSGMID 112

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
             AK G    A + F         CWN +I G         A+++ S M+      + +T
Sbjct: 113 LLAKSGRFEDALKAFEDGDRGSAVCWNTVISGAVRNDQDRLAIDMFSDMVRGSCEPNSFT 172

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +   L  C++ A+  +GR +HGL++R + E  + +  ++++MY KS  M  A + F RM 
Sbjct: 173 YSGVLSACAMGAELCVGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMP 232

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++V+SW T   GF + + P     L  + + SG   N  T + +L  C ++  +    Q
Sbjct: 233 IRNVVSWTTAIAGFVQEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQ 292

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNC 427
           +  + +      +  V  +LI  +   GA+E++ + F+ V +  +   W+  +SG   + 
Sbjct: 293 MHGMIMKKELYLDHAVKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHS 352

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                L+    ++  G+  N   +  V  +    ++ +   Q+H  +IK GF     + S
Sbjct: 353 LPRS-LQLLMRMFRQGLRPNDRCYASVFSSM---DSIEFGRQLHSLVIKDGFVHDVLVGS 408

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L   Y     L++S+      +  D  SW AM++     GH+ EA  +F  ++  G KP
Sbjct: 409 ALSTMYSRGDDLEDSYRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKP 468

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D   L  IL++C       + K+IH  ++++       ++  ++  Y+KC + + AR  F
Sbjct: 469 DYVTLSAILSACDKPECLLKGKTIHGHILRV-HGEITSISHCLVSMYSKCQEAQTARRIF 527

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D +    D ++++++I  Y+ +G  +EAM +F  M     Q  +    S++S C+     
Sbjct: 528 DAT-PCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIARP 586

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
             G LL      + G+         LV + S++G L D++ V + +   P    + +++ 
Sbjct: 587 LYGKLLHGHA-IKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEIT-SPDLVTWTAIID 644

Query: 728 GCRIHGN 734
           G   HG+
Sbjct: 645 GYAQHGS 651



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/578 (22%), Positives = 269/578 (46%), Gaps = 23/578 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG +++     D+F+  +++ MY+K G     +R F  M  RN+VSWT  ++  +
Sbjct: 188 VGRAVHGLVLRRDPEYDVFVGTSIVNMYAKSGDMIAAMREFWRMPIRNVVSWTTAIAGFV 247

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q  E    +++  +M  +G   N++   S++  C  M        +H   +K  +  +  
Sbjct: 248 QEEEPVSAVRLLREMVRSGVSMNKYTATSILLACSQMYMIREVSQMHGMIMKKELYLDHA 307

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  +++  YA +G +  +E  F  + +      W+  I G +       +L ++  M  +
Sbjct: 308 VKEALICTYANIGAIELSETAFEEVGTVSSTRIWSTFISGVSSHSLP-RSLQLLMRMFRQ 366

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +   + +     S +   + GRQ+H L+I+      + + +AL  MY +   ++ +
Sbjct: 367 GLRPNDRCYASVF---SSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDS 423

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           ++VF+ M ++D +SW  +  GF+ + +  +   LF   IL G +P++VT S +L  C K 
Sbjct: 424 YRVFKEMQERDEVSWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKP 483

Query: 361 LDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
             L  G  +    L +H    +  +++  L+ M+ +C   + A  +FD    K+   ++ 
Sbjct: 484 ECLLKGKTIHGHILRVHG---EITSISHCLVSMYSKCQEAQTARRIFDATPCKDQVMFSS 540

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++SGY  N C A+ +  F  +  +G +++      ++  C           +HG  IK G
Sbjct: 541 MISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAG 600

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             S   + SSL+K Y   G L++S +  +     D+ +W A++      G   +A+ +F 
Sbjct: 601 ILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFD 660

Query: 539 SLVEAGEKPDEYILGTILNSCA-------AIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            ++  G KPD  +L ++L++C+        +  ++  ++I+      G    ++    ++
Sbjct: 661 LMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTIY------GVEPMLHHYCCMV 714

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           D   + G ++ A+   +      D++V++TL  A   H
Sbjct: 715 DLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAACRVH 752



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 156/308 (50%), Gaps = 1/308 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S   G Q+H  ++K GF +D+ + + L  MYS+        RVF EM ER+ V
Sbjct: 377 SVFSSMDSIEFGRQLHSLVIKDGFVHDVLVGSALSTMYSRGDDLEDSYRVFKEMQERDEV 436

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +V+    +G      +++  M  +GF P+   + +++  C        G +IH   
Sbjct: 437 SWTAMVAGFASHGHSVEAFRLFRIMILDGFKPDYVTLSAILSACDKPECLLKGKTIHGHI 496

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L++  E      C +++ Y+K  +   A R+F +    D   +++MI GY+  G   EA+
Sbjct: 497 LRVHGEITSISHC-LVSMYSKCQEAQTARRIFDATPCKDQVMFSSMISGYSTNGCSAEAM 555

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   ML  G  +D++   + L  C+ +A    G+ +HG  I++ +   +S+ ++L+ +Y
Sbjct: 556 SLFQLMLSTGFQIDRFICSSILSLCADIARPLYGKLLHGHAIKAGILSDLSVSSSLVKLY 615

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            KS  ++ + KVF+ +   D+++W  +  G++++ +      +F   I  G +P+ V   
Sbjct: 616 SKSGNLNDSRKVFDEITSPDLVTWTAIIDGYAQHGSGRDALEMFDLMITLGVKPDTVVLV 675

Query: 352 ILLRQCGK 359
            +L  C +
Sbjct: 676 SVLSACSR 683



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 28/307 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWG 98
            + D + L+  LS  +  +  + G  +HGHI+++ G    I   + L++MYSKC      
Sbjct: 466 FKPDYVTLSAILSACDKPECLLKGKTIHGHILRVHGEITSI--SHCLVSMYSKCQEAQTA 523

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            R+FD    ++ V ++ ++S    NG     + ++  M + GF  + F   S++ +C  +
Sbjct: 524 RRIFDATPCKDQVMFSSMISGYSTNGCSAEAMSLFQLMLSTGFQIDRFICSSILSLCADI 583

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
               +G  +H  A+K  I  +  V  S++  Y+K G++  + +VF  I+S D+  W A+I
Sbjct: 584 ARPLYGKLLHGHAIKAGILSDLSVSSSLVKLYSKSGNLNDSRKVFDEITSPDLVTWTAII 643

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGL 271
            GYA  G G +AL +   M+  G+  D    ++ L  CS   LV +    F+  R I+G 
Sbjct: 644 DGYAQHGSGRDALEMFDLMITLGVKPDTVVLVSVLSACSRNGLVEEGVNYFESMRTIYG- 702

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF----------- 319
                VE  +     ++D+  +S  +  A    E M  K D++ W+TLF           
Sbjct: 703 -----VEPMLHHYCCMVDLLGRSGRLQDAKSFIESMPMKADLMVWSTLFAACRVHNDAVL 757

Query: 320 GGFSENK 326
           GGF ENK
Sbjct: 758 GGFVENK 764


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 168/571 (29%), Positives = 300/571 (52%), Gaps = 3/571 (0%)

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           VF  +   +   +  +I GYA      EA  + + +  EG  ++ + F   L+    +  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            ++GR +HG +++     +  I  ALID Y  S  +  A +VF+ ++ KD++SW  +   
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           ++EN    +    F +  ++G +PN+ TF+ +L+ C  L + D G  + C  L   +  +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V   L+ ++ RCG  + A   F ++   ++  W+ ++S +  +      L+ FC +  
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           + V  N  TF  V++     E+  +   IHG  +K G S+  ++ ++L+  Y   G ++ 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S E        +  SW  ++ + V  G    A+++F +++    +  E    +IL +CA 
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + A +    +H    K  +  +V V +A+ID YAKCG IK AR  FD   +  D + +N 
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDM-LDLRDKVSWNA 420

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I  Y+ HGL  EA+++F+ MK    +P + TFV V+SACS+ G +D+G   F SM   Y
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           G++P  + Y C+V ++ R+G L+ A   IE +PF+PS  ++R+LL  C IH + ELG  +
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 742 SEKLLLLLPKNDAAHVLLSK--RKRQREGNL 770
           ++++L L P+++A+HVLLS    + +R GN+
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNV 571



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 220/416 (52%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P      L L  +++   LG  VHG ++K+G+ ++ F+   LI  YS  G       VF
Sbjct: 45  NPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVF 104

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DE++ +++VSWT ++++  +N  F   L+ +  M+  GF PN F    V+K C+ +   +
Sbjct: 105 DEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFD 164

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G ++HC  LK   E++ +VG  +L  Y + GD   A R F  +  +DV  W+ MI  +A
Sbjct: 165 AGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFA 224

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   +AL +   M    +  +++TF + LQ  + +   D+ + IHG  +++ +   + 
Sbjct: 225 QSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVF 284

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+  Y K   ++ + ++FE ++D++ +SWNT+   + +  +  +  SLF   +   
Sbjct: 285 VSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQ 344

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            +   VT+S +LR C  L  L+LGLQ+ CL     +  +  V ++LI M+ +CG+++ A 
Sbjct: 345 VQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDAR 404

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +FD +  ++  +WN ++ GY  +    + +K F  + E+  + +  TF  V+  C
Sbjct: 405 FMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSAC 460



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 222/469 (47%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFDEM ERN VS+  ++    Q+ +F    +++  +   G   N F   +V+K+ VSM  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           +E G  +H   LK+    N F+G ++++ Y+  G V+ A  VF  ISS D+  W  MI  
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA      EAL   S M   G   + +TF   L+ C  + +FD G+ +H  ++++  E  
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +   L+++Y +    D A++ F  M   DVI W+ +   F+++    +   +F +   
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +   PN  TFS +L+    +  LDL   +   AL  G   +  V+++L+  + +CG +E 
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  +F+ +S +N  +WN ++  Y         L  F N+    V+    T+  ++  C  
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++  Q+H    KT +     + ++LI  Y   G + ++    +  +  D  SW A+
Sbjct: 362 LAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAI 421

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           +      G   EA+ +F+ + E   KPDE     +L++C+  G     K
Sbjct: 422 ICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGK 470



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 185/364 (50%), Gaps = 3/364 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  ++K  +  D+++   L+ +Y++CG      R F +M + +++ W+ ++S   Q
Sbjct: 166 GKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ 225

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+ +  L+++  M+    +PN+F   SV++    + + +   +IH  ALK  +  + FV
Sbjct: 226 SGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  YAK G +  +  +F ++S  +   WN +I  Y   G G  AL++ S+ML   +
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              + T+ + L+ C+ +A  ++G Q+H L  ++     +++ NALIDMY K   +  A  
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF 405

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ +  +D +SWN +  G+S +    +   +F+    +  +P+ +TF  +L  C     
Sbjct: 406 MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGR 465

Query: 363 LDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           LD G Q    +    G        + ++++  R G ++ A    +++ ++ ++  W  LL
Sbjct: 466 LDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALL 525

Query: 421 SGYC 424
            G C
Sbjct: 526 -GAC 528



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 143/292 (48%), Gaps = 4/292 (1%)

Query: 34  FCS--DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           FC    +F+  +    +  L  S +++S  L   +HGH +K G + D+F+ N L+A Y+K
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG     + +F+ +++RN VSW  I+ + +Q G+ +  L ++ +M        E    S+
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           ++ C ++ A E G  +HC   K    ++  VG ++++ YAK G +  A  +F  +   D 
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDK 415

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNA+I GY+  G G EA+ + + M       D+ TF+  L  CS     D G+Q    
Sbjct: 416 VSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTS 475

Query: 272 IIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           + +   +E  +     ++ +  +S  +D A K  E +  +  V+ W  L G 
Sbjct: 476 MKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  298 bits (763), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 193/653 (29%), Positives = 329/653 (50%), Gaps = 20/653 (3%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           +E  V   +K C   G S+ G  IH FA+         V  S++  Y K G+   A  VF
Sbjct: 78  DEVTVALSLKAC--QGESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVF 135

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            ++S  D+  WN ++ G+       +ALN   SM + GI  D  T+ +AL  C     F 
Sbjct: 136 ENLSHPDIVSWNTVLSGFEE---SVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFL 192

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G Q+H L+++  + C + I NAL+ MY +   +D A +VF+ M ++D++SWN +  G++
Sbjct: 193 FGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYA 252

Query: 324 -ENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
            E K  G  A L F   +  G   +HV+ +  +  CG + +L+LG Q+  L    G+   
Sbjct: 253 QEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTH 312

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            +V + L+  + +C   + A +VF+++S +N+ +W  ++S       + D +  F  +  
Sbjct: 313 VSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRV 367

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           +GV  N  TF  ++              IHG  IK+ F S   + +S I  Y  F  +  
Sbjct: 368 NGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQE 427

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S +        +  SW A++S     G   EA+  + S V+   KP++Y  G++LN+ AA
Sbjct: 428 STKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKE-IKPNQYTFGSVLNAIAA 486

Query: 562 IG--AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
               +    KS H  ++KLG  T+  V+ A++D Y K GDI  ++  F+++        +
Sbjct: 487 AEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQ-FAW 545

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             +I AYA HG     M ++ +M+   + P   TF+SV++AC  KG+VD G  +F SM  
Sbjct: 546 TAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVK 605

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           ++ ++P+ + Y  +VDML R G L++A+ ++  +P  P  +V +SLL  CR+HGN E+ E
Sbjct: 606 KHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAE 665

Query: 740 WASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
               +L+ + P +   +VL++    ++       E V  V  G++   +K E+
Sbjct: 666 KVVGRLIEMDPASSGPYVLMANLYAEKG----KWEKVAEVRRGMRGRGVKKEV 714



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 167/649 (25%), Positives = 297/649 (45%), Gaps = 29/649 (4%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N F   S    D + +A  LSL        LG Q+HG  V  GF + + + N+L+ MY K
Sbjct: 67  NHFQLHSLENVDEVTVA--LSLKACQGESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCK 124

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
            G FG  L VF+ ++  ++VSW  ++S   ++ +    L     M   G   +     S 
Sbjct: 125 SGNFGKALIVFENLSHPDIVSWNTVLSGFEESVD---ALNFARSMHYCGIAFDPVTYTSA 181

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C       FG+ +H   +K  +    F+G +++  Y++ G +  A RVF  +   D+
Sbjct: 182 LAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDL 241

Query: 212 GCWNAMIGGYAHCG--YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
             WNAMI GYA  G  YG EA+ +  +M+  G+ +D  +   A+  C  + + ++GRQIH
Sbjct: 242 VSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIH 301

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           GL  +      +S+ N L+  Y K      A  VFE +++++V+SW T+     E+    
Sbjct: 302 GLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEED---- 357

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
              SLF+   ++G  PN VTF  L+        +  GL +  L +   FL E+ V++S I
Sbjct: 358 -AVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFI 416

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +   ++ +  +F+ ++ +   +WN L+SGY  N    + L T+ +  +  ++ N  
Sbjct: 417 TMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLSAVKE-IKPNQY 475

Query: 450 TFFYVVETCCRSENQQMV--GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FS 506
           TF  V+     +E+  +      H  ++K G  +   +  +L+  Y   G +  S   F+
Sbjct: 476 TFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFN 535

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
              ER   A W A++SA    G     ++++  +   G  PD     ++L +C   G   
Sbjct: 536 ETLERTQFA-WTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVD 594

Query: 567 RTKSIHPFVIK---LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
               +   ++K   +   +E Y  S ++D   + G +  A     Q      + V  +L+
Sbjct: 595 AGHRVFDSMVKKHSIEPTSEHY--SIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLL 652

Query: 624 MAYAHHGLVSEAMEIFDKM--KLANLQP-SQATFVSVMSACSHKGLVDK 669
            +   HG     ME+ +K+  +L  + P S   +V + +  + KG  +K
Sbjct: 653 GSCRLHG----NMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEK 697


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 301/586 (51%), Gaps = 2/586 (0%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           + +N  +   ++  Y +     +A  VF  +   +   W A+I  +A      +A+ + S
Sbjct: 76  LARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFS 135

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           SML  G   D++   +A++ C+ + D  +GRQ+H   I+S+    + + NAL+ MY KS 
Sbjct: 136 SMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSG 195

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILL 354
            +   F +FER+ DKD+ SW ++  G ++         +F + I  G   PN   F  + 
Sbjct: 196 SVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVF 255

Query: 355 RQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           R C  +++ L+ G Q+  L +            SL  M+ RC  ++ A  VF  +   ++
Sbjct: 256 RACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDL 315

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN L++ +  +   ++ +  F  +  S ++ +G T   ++  C   +  +    IH  
Sbjct: 316 VSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSY 375

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K G      +C+SLI  Y       ++ +  +     D+ +W ++++A V   H  + 
Sbjct: 376 LVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDV 435

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
             +F  L  +    D   L  +L++ A +G ++  K +H +  K+G  ++  +++A+ID 
Sbjct: 436 FKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAILSNALIDT 495

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  A   F+      DV  +++LI+ YA  G   EA+++F +M+   ++P+  T
Sbjct: 496 YAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVT 555

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV V+ ACS  GLVD+GC  +  M+ +YG+ P+ +   C++D+L+R G L +A   ++ M
Sbjct: 556 FVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQM 615

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           PF+P   ++ +LL+  R H + E+G+ A+E +L + P + AA+VLL
Sbjct: 616 PFEPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLL 661



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 295/644 (45%), Gaps = 17/644 (2%)

Query: 56  NLKSRVLGTQVHGHIVKLG-----FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
            L+S   G  VH H++           +  L N+LI MY +C        VFD M +RN 
Sbjct: 52  RLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDRNP 111

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  +++A  QN      + ++  M   G  P+EFA+GS ++ C  +G    G  +H  
Sbjct: 112 VSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQ 171

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           A+K     +  V  +++  Y+K G V     +F  I   D+  W ++I G A  G   +A
Sbjct: 172 AIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDA 231

Query: 231 LNVVSSMLFEGI-TMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISIVNALI 288
           L++   M+ EG+   +++ F +  + CS+V +  + G QIHGL ++ +++ +     +L 
Sbjct: 232 LHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLG 291

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY + + +D A KVF R+   D++SWN+L   FS +    +   LF +   S  +P+ +
Sbjct: 292 DMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKPDGI 351

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T   LL  C     L  G  +    +  G   +  V +SLI M+ RC     A  VF   
Sbjct: 352 TVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHET 411

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           + +++ TWN +L+    +    DV K F  +  S   ++  +   V+         +M  
Sbjct: 412 NDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGYFEMAK 471

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALV 525
           Q+H    K G  S   + ++LI +Y   G LD++   FE   G  R D+ SW +++    
Sbjct: 472 QVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIM-GTGR-DVFSWSSLIVGYA 529

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEV 584
             G+  EA+ +F  +   G KP+      +L +C+ +G        +  +  + G     
Sbjct: 530 QFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTK 589

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
              S VID  A+ G +  A    DQ     D+I++NTL+ A   H  V       +   +
Sbjct: 590 EHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAE--GV 647

Query: 645 ANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            N+ PS  A +V + +  +  G  ++   L K M S  G+Q SP
Sbjct: 648 LNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSS-GVQKSP 690


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 202/727 (27%), Positives = 348/727 (47%), Gaps = 50/727 (6%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVG 149
           + G+    L +FD +     V W  I+   I N      L  Y  M+ +     + +   
Sbjct: 49  RQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFS 108

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK-LGDVA----------- 197
           S +K C    + + G ++HC  L+     +  V  S+LN Y+  L +V            
Sbjct: 109 STLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC 168

Query: 198 -AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
               RVF ++   +V  WN MI  Y       EA  +  +M+  GI     +F+N     
Sbjct: 169 DLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAV 228

Query: 257 SLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
             ++D+D    ++GL+++  S+      +V++ I MY +   +D+A ++F+   +++   
Sbjct: 229 WRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV 288

Query: 315 WNTLFGGFSENKNPGQTASLF------HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           WNT+ GG+ +N  P +   LF       +F+L     + VTF   L    +L  L+LG Q
Sbjct: 289 WNTMIGGYVQNNCPIEAIDLFVQVMESEQFVL-----DDVTFLSALTAISQLQWLELGRQ 343

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           L    L    + +  + +++I M+ RCG++  +  VF N+  +++ TWN ++S +  N  
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           D + L     + + G  V+  T   ++       +Q++  Q H  +I+ G    G + S 
Sbjct: 404 DDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDSY 462

Query: 489 LIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           LI  Y   G +  +   FE ++  +R D A+W AM++     G + E   +F  ++E   
Sbjct: 463 LIDMYAKSGLITTAQQLFEKNSDYDR-DEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P+   L +IL +C  +G     K IH F I+   N  V+V +A++D Y+K G I  A  
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAEN 581

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F ++   N V  Y T+I +Y  HG+   A+ +F  M  + ++P   TFV+++SACS+ G
Sbjct: 582 VFAETLEKNSV-TYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP-TVYRS 724
           LVD+G  +F+SM+ +Y +QPS + Y C+ DML R G + +A   ++ +  + +   ++ S
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGS 700

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAA--HVLLSK--------------RKRQREG 768
           LL  CRIHG  ELG+  + KLL +   +     HVLLS               RK  R+ 
Sbjct: 701 LLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQK 760

Query: 769 NLLDHEG 775
            L+   G
Sbjct: 761 GLMKEAG 767



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 248/544 (45%), Gaps = 29/544 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----GYFGWG 98
           D    + +L      +S  LG  +H H+++  F +   + N+L+ MYS C     Y G  
Sbjct: 103 DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162

Query: 99  L---------RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
                     RVFD M +RN+V+W  ++S  ++        KM+  M   G  P   +  
Sbjct: 163 YDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFV 222

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           +V      M   +    ++   +K+  +   + FV  S +  YA+LG V  A  +F    
Sbjct: 223 NVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCL 282

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
             +   WN MIGGY       EA+++ V  M  E   +D  TF++AL   S +   ++GR
Sbjct: 283 ERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGR 342

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q+H  I++S     + I+NA+I MY +   +  +FKVF  M ++DV++WNT+   F +N 
Sbjct: 343 QLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNG 402

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   L       G   + VT + LL     L   ++G Q     +  G +  E + S
Sbjct: 403 LDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHG-IQFEGMDS 461

Query: 387 SLIYMFCRCGAVEMAHSVFD-NVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            LI M+ + G +  A  +F+ N  Y ++  TWN +++GY  N    +    F  + E  V
Sbjct: 462 YLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNV 521

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DN 501
             N  T   ++  C       +  QIHG  I+   +   ++ ++L+  Y   G +   +N
Sbjct: 522 RPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAEN 581

Query: 502 SFEFSNGAERLDMAS--WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            F     AE L+  S  +  M+S+    G    A+++FH+++ +G KPD      IL++C
Sbjct: 582 VF-----AETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSAC 636

Query: 560 AAIG 563
           +  G
Sbjct: 637 SYAG 640



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 178/338 (52%), Gaps = 8/338 (2%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S+ F+  D  FL+   ++S+ L+   LG Q+H +I+K      + + N +I MYS+CG  
Sbjct: 315 SEQFVLDDVTFLSALTAISQ-LQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSI 373

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           G   +VF  M ER++V+W  +VSA +QNG  D GL +   M+  GFM +   + +++ + 
Sbjct: 374 GTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLA 433

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCS--VLNFYAKLGDVAAAERVFYSISS--DDV 211
            ++ + E G   H + ++  I+   F G    +++ YAK G +  A+++F   S    D 
Sbjct: 434 SNLRSQEIGKQAHAYLIRHGIQ---FEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDE 490

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI GY   G   E   V   M+ + +  +  T  + L  C+ +    +G+QIHG 
Sbjct: 491 ATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGF 550

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            IR  +  ++ +  AL+DMY KS  + YA  VF    +K+ +++ T+   + ++    + 
Sbjct: 551 AIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERA 610

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SLFH  + SG +P+ VTF  +L  C     +D GL++
Sbjct: 611 LSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 226/487 (46%), Gaps = 13/487 (2%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           ++G +VKLG  F +D F+ ++ I MY++ G   +   +FD   ERN   W  ++   +QN
Sbjct: 240 LYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                 + ++V  M++  F+ ++    S +     +   E G  +H + LK        +
Sbjct: 300 NCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVI 359

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y++ G +  + +VF ++   DV  WN M+  +   G   E L +V +M  +G 
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGF 419

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T    L   S +   +IG+Q H  +IR  ++    + + LIDMY KS  +  A +
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQ 478

Query: 303 VFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +FE+ +  D+D  +WN +  G+++N    +  ++F K I    RPN VT + +L  C  +
Sbjct: 479 LFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             + LG Q+   A+ C       V ++L+ M+ + GA+  A +VF     KN  T+  ++
Sbjct: 539 GTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIHGAIIKT 477
           S Y  +      L  F  +  SG++ +  TF  ++  C  +   +    + Q      K 
Sbjct: 599 SSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVT 535
             S+  Y C + +   V  G++  ++EF    G E      WG+++ A    G       
Sbjct: 659 QPSAEHYCCVADMLGRV--GRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKV 716

Query: 536 IFHSLVE 542
           + + L+E
Sbjct: 717 VANKLLE 723



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 18/296 (6%)

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCT 450
            CR G    A  +FD++       WN ++ G+  N    D L  +  +  S   + +  T
Sbjct: 47  LCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYT 106

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY----VNFGQLDNSFEFS 506
           F   ++ C ++ + ++   +H  ++++ F S   + +SL+  Y         L  +++F+
Sbjct: 107 FSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFN 166

Query: 507 N---------GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           N            + ++ +W  M+S  V      EA  +F +++  G +P       +  
Sbjct: 167 NCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFP 226

Query: 558 SCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           +   +  Y     ++  V+KLG  F  + +V S+ I  YA+ G +  AR  FD     N 
Sbjct: 227 AVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERN- 285

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQATFVSVMSACSHKGLVDKG 670
             V+NT+I  Y  +    EA+++F + M+         TF+S ++A S    ++ G
Sbjct: 286 TEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELG 341


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 170/598 (28%), Positives = 313/598 (52%), Gaps = 5/598 (0%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H    K  I  + F    + + YAK   + AA +VF      +V  WN+ +  Y     
Sbjct: 23  LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREKQ 82

Query: 227 GFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIV 284
             E L +   M+   G   D +T   AL+ C+ +   ++G+ IHG   ++ E+   + + 
Sbjct: 83  WEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVG 142

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +AL+++Y K   M  A KVFE     D + W ++  G+ +N +P +  +LF + ++    
Sbjct: 143 SALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCV 202

Query: 345 P-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             + VT   ++  C +LL++  G  +  L +   F  +  + +SL+ ++ + G  ++A +
Sbjct: 203 VLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAAN 262

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F  +  K++ +W+ +++ Y  N    + L  F  + E   E N  T    ++ C  S N
Sbjct: 263 LFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   +IH   +  GF     + ++LI  Y+     D + +      + D+ SW A++S 
Sbjct: 323 LEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSG 382

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               G  ++++ +F +++  G +PD   +  IL + + +G +Q+   +H +V++ GFN+ 
Sbjct: 383 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 442

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM- 642
           V+V +++I+ Y+KCG +  A   F +     DV++++++I AY  HG   EA+EIFD+M 
Sbjct: 443 VFVGASLIELYSKCGSLGDAVKLF-KGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMV 501

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           K + ++P+  TF+S++SACSH GLV++G  +F  M   Y ++P  + +G +VD+L R G 
Sbjct: 502 KNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQ 561

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  A  +I  MP    P V+ +LL  CRIH N E+GE A++ L  L P +   ++LLS
Sbjct: 562 LGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLS 619



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 255/504 (50%), Gaps = 4/504 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           +Q+H  + K G  +D F    L ++Y+KC       +VFDE    N+  W   + +  + 
Sbjct: 21  SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCRE 80

Query: 124 GEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRIEKNPF 181
            +++  L+++  M  T G  P+ F +   +K C  +   E G  IH FA K   I  + F
Sbjct: 81  KQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMF 140

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFE 240
           VG +++  Y+K G +  A +VF      D   W +M+ GY       EAL + S M + +
Sbjct: 141 VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMD 200

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            + +D  T ++ +  C+ + +   G  +HGL+IR E +  + +VN+L+++Y K+     A
Sbjct: 201 CVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIA 260

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F +M +KDVISW+T+   ++ N+   +  +LFH+ I     PN VT    L+ C   
Sbjct: 261 ANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVS 320

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L+ G ++  +A+  GF  + +V+++LI M+ +C   + A  +F  +  K++ +W  LL
Sbjct: 321 RNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALL 380

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N      +  F N+   G++ +      ++         Q    +HG ++++GF+
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 440

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S  ++ +SLI+ Y   G L ++ +   G    D+  W +M++A    G   EA+ IF  +
Sbjct: 441 SNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQM 500

Query: 541 VE-AGEKPDEYILGTILNSCAAIG 563
           V+ +  +P+     +IL++C+  G
Sbjct: 501 VKNSTVRPNNVTFLSILSACSHAG 524



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 210/385 (54%), Gaps = 3/385 (0%)

Query: 377  GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
            G   +  + +    M+     ++ A  VF+++       WN ++ G+  +      L+ +
Sbjct: 747  GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806

Query: 437  CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
              + E G++ +   F + +++C    + Q    IH  ++  G S+  ++ ++L+  Y   
Sbjct: 807  SKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKC 866

Query: 497  GQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G ++ +   F   A R D+ SW +M+S   H G+N E +  F  +  +G  P+   + ++
Sbjct: 867  GDIEAARLVFDKMAVR-DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSV 925

Query: 556  LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
            L +C  +GA ++ +  H +VI+ GF  ++ VA+A++D Y+KCG +  AR  FD++    D
Sbjct: 926  LLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDET-AGKD 984

Query: 616  VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
            ++ ++ +I +Y  HG   +A+++FD+M  A ++PS  TF  V+SACSH GL+++G + F+
Sbjct: 985  LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 1044

Query: 676  SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
             M  ++ +      Y C+VD+L R G L +A  +IE MP +P  +++ SLL  CRIH N 
Sbjct: 1045 LMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNL 1104

Query: 736  ELGEWASEKLLLLLPKNDAAHVLLS 760
            +L E  ++ L  L P +   HVLLS
Sbjct: 1105 DLAEKIADHLFHLDPVHAGYHVLLS 1129



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 216/465 (46%), Gaps = 17/465 (3%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLR------------KDPIFLAKSLSLSEN 56
           +F + P  + H     +   C   Q+  +  LR             D   +  +L     
Sbjct: 58  VFDETPHPNVHLWNSTLRSYCREKQW--EETLRLFHLMICTAGEAPDNFTIPIALKACAG 115

Query: 57  LKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           L+   LG  +HG   K     +D+F+ + L+ +YSKCG  G  L+VF+E    + V WT 
Sbjct: 116 LRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTS 175

Query: 116 IVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           +V+   QN + +  L ++  M   +  + +   + SV+  C  +   + G  +H   ++ 
Sbjct: 176 MVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRR 235

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             + +  +  S+LN YAK G    A  +F  +   DV  W+ MI  YA+     EALN+ 
Sbjct: 236 EFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLF 295

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M+ +    +  T ++ALQ C++  + + G++IH + +    E   S+  ALIDMY+K 
Sbjct: 296 HEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC 355

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           S  D A  +F+R+  KDV+SW  L  G+++N    ++  +F   +  G +P+ V    +L
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
               +L      L L    +  GF     V +SLI ++ +CG++  A  +F  +  +++ 
Sbjct: 416 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 475

Query: 415 TWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETC 458
            W+ +++ Y  +    + L+ F   +  S V  N  TF  ++  C
Sbjct: 476 IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSAC 520



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 163/328 (49%), Gaps = 1/328 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP+ L   +S    L +   G+ VHG +++  F  D+ L N+L+ +Y+K G       +F
Sbjct: 205 DPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLF 264

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            +M E++++SW+ +++    N   +  L ++ +M    F PN   V S ++ C      E
Sbjct: 265 SKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLE 324

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH  A+    E +  V  ++++ Y K      A  +F  +   DV  W A++ GYA
Sbjct: 325 EGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYA 384

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G  ++++ V  +ML +GI  D    +  L   S +  F     +HG ++RS    ++ 
Sbjct: 385 QNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 444

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  +LI++Y K   +  A K+F+ M  +DV+ W+++   +  +   G+   +F + + + 
Sbjct: 445 VGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNS 504

Query: 343 S-RPNHVTFSILLRQCGKLLDLDLGLQL 369
           + RPN+VTF  +L  C     ++ GL++
Sbjct: 505 TVRPNNVTFLSILSACSHAGLVEEGLKI 532



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 164/368 (44%), Gaps = 15/368 (4%)

Query: 65   QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
            + H  I   G   D  +      MY           VF+++       W +++     +G
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 125  EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             F   L++Y  M   G  P++FA    +K C  +   + G  IH   +      + FV  
Sbjct: 798  RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857

Query: 185  SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            ++++ YAK GD+ AA  VF  ++  D+  W +MI GYAH GY  E L     M   G+  
Sbjct: 858  ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917

Query: 245  DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
            ++ + ++ L  C  +     G   H  +I++  E  I +  A++DMY K   +D A  +F
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977

Query: 305  ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            +  A KD++ W+ +   +  + +  +   LF + + +G RP+HVTF+ +L  C     L+
Sbjct: 978  DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037

Query: 365  LGLQLQCLALHCGFLDEENVTSS-------LIYMFCRCGAVEMAHSVFDNVSYK-NITTW 416
             G       ++   + EE V +        ++ +  R G +  A  + +N+  + + + W
Sbjct: 1038 EG------KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091

Query: 417  NELLSGYC 424
              LL G C
Sbjct: 1092 GSLL-GAC 1098



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/424 (23%), Positives = 189/424 (44%), Gaps = 15/424 (3%)

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            T  KY  I +  G   ++ F   ++ H  I    ++    I+     MY+  + +D A  
Sbjct: 714  TESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASI 773

Query: 303  VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            VFE + +     WN +  GF+ +     +  L+ K +  G +P+   F   L+ C  L D
Sbjct: 774  VFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSD 833

Query: 363  LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            L  G  +    + CG  ++  V ++L+ M+ +CG +E A  VFD ++ +++ +W  ++SG
Sbjct: 834  LQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG 893

Query: 423  YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
            Y  N  +++ L  F  +  SGV  N  +   V+  C      +     H  +I+TGF   
Sbjct: 894  YAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD 953

Query: 483  GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
              + ++++  Y   G LD +    +     D+  W AM+++    GH  +A+ +F  +V+
Sbjct: 954  ILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVK 1013

Query: 543  AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            AG +P       +L++C+  G  +  K      +     TE +V +  +  YA   D+ G
Sbjct: 1014 AGVRPSHVTFTCVLSACSHSGLLEEGK------MYFQLMTEEFVIARKLSNYACMVDLLG 1067

Query: 603  ARMAFDQSFN-------SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
                  ++ +         D  ++ +L+ A   H  +  A +I D   L +L P  A + 
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIAD--HLFHLDPVHAGYH 1125

Query: 656  SVMS 659
             ++S
Sbjct: 1126 VLLS 1129



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 6/338 (1%)

Query: 190  YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
            Y     + AA  VF  I +     WN MI G+A  G    +L + S M+ +G+  DK+ F
Sbjct: 762  YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821

Query: 250  INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              AL+ C+ ++D   G+ IH  ++       + +  AL+DMY K   ++ A  VF++MA 
Sbjct: 822  PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881

Query: 310  KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +D++SW ++  G++ N    +T   F     SG  PN V+   +L  CG L  L  G   
Sbjct: 882  RDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWF 941

Query: 370  QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
                +  GF  +  V ++++ M+ +CG++++A  +FD  + K++  W+ +++ Y  +   
Sbjct: 942  HSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHG 1001

Query: 430  ADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIHGAIIKTGFSSCGYIC 486
               +  F  + ++GV  +  TF  V+  C  S   E  +M  Q+             Y C
Sbjct: 1002 RKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYAC 1061

Query: 487  SSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
              ++      GQL  + +   N     D + WG+++ A
Sbjct: 1062 --MVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 149/318 (46%), Gaps = 6/318 (1%)

Query: 40   LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            L+ D      +L     L     G  +H H+V  G +ND+F+   L+ MY+KCG      
Sbjct: 814  LKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAAR 873

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             VFD+MA R+LVSWT ++S    NG     L  +  M+++G +PN  ++ SV+  C ++G
Sbjct: 874  LVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLG 933

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            A   G   H + ++   E +  V  ++++ Y+K G +  A  +F   +  D+ CW+AMI 
Sbjct: 934  ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993

Query: 220  GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
             Y   G+G +A+++   M+  G+     TF   L  CS     + G+    L+    V  
Sbjct: 994  SYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIA 1053

Query: 280  -SISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLF-H 336
              +S    ++D+  ++  +  A  + E M  + D   W +L G    + N      +  H
Sbjct: 1054 RKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADH 1113

Query: 337  KFILSGSRPNHVTFSILL 354
             F L    P H  + +LL
Sbjct: 1114 LFHLD---PVHAGYHVLL 1128



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 8/206 (3%)

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           N + V Q+H  + KTG     +  + L   Y     L  + +  +     ++  W + + 
Sbjct: 16  NGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLR 75

Query: 523 ALVHQGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-F 580
           +   +    E + +FH ++  AGE PD + +   L +CA +   +  K IH F  K    
Sbjct: 76  SYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEI 135

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            ++++V SA+++ Y+KCG +  A   F++ F   D +++ +++  Y  +    EA+ +F 
Sbjct: 136 GSDMFVGSALVELYSKCGQMGEALKVFEE-FQRPDTVLWTSMVTGYQQNNDPEEALALFS 194

Query: 641 KMKLAN---LQPSQATFVSVMSACSH 663
           +M + +   L P   T VSV+SAC+ 
Sbjct: 195 QMVMMDCVVLDP--VTLVSVVSACAQ 218


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 189/671 (28%), Positives = 342/671 (50%), Gaps = 18/671 (2%)

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMK 153
           F  GLR+ D +++         +  A  +G +   L++Y +++ +G  + + + + S++K
Sbjct: 6   FQAGLRLSDLISK---------IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILK 56

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C S  +   G ++H   +K   + +  +  S ++FY K GD+ +A+R F S  + D   
Sbjct: 57  AC-SNTSFNLGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVS 115

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN M+ G    G     L       F     +  + +  +Q    +  +  G   HG I 
Sbjct: 116 WNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIF 175

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTA 332
           RS     +S+ N+L+ +Y +   M +A K+F  M+ + DV+SW+ + GGF +     Q  
Sbjct: 176 RSGFSAILSVQNSLLSLYAEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGF 234

Query: 333 SLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
            +F   +  +G  P+ VT   +L+ C  L D+ LG  +  L +  G  D+  V +SLI M
Sbjct: 235 LMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDM 294

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C  V  A   F  +  KNI +WN +LS Y  N    + L     +   G E +  T 
Sbjct: 295 YSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTL 354

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++      +      +HG II+ G+ S   + +S+I +Y     ++ +    +G  +
Sbjct: 355 ANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNK 414

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            D+ +W  M++     G   EA+++F  + E    P+   +  ++ +CA     +++K  
Sbjct: 415 KDVVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWA 473

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H   ++ G  +EV + +++ID Y+KCGDI+ +  AF+Q    N V+ ++ +I A+  +GL
Sbjct: 474 HGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKN-VVCWSAMISAFRINGL 532

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+ +F+K+K    +P+  T +S++SACSH GL+++G   F SM  ++G++P  + Y 
Sbjct: 533 AHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYS 592

Query: 692 CLVDMLSRNGYLEDAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           C+VDMLSR G   +A  +IE +P   +   +++ +LLS CR +GN  LG  A+ ++L L 
Sbjct: 593 CIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGSGAASRVLQLE 652

Query: 750 PKNDAAHVLLS 760
           P + A ++L S
Sbjct: 653 PLSSAGYMLAS 663



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 264/550 (48%), Gaps = 15/550 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LGT +HG ++K G  +   + N+ I  Y K G      R FD    ++ VSW ++V    
Sbjct: 65  LGTAMHGCLIKQGCQSSTSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNF 124

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG    GL  ++  +   F PN  ++  V++    +     G++ H +  +        
Sbjct: 125 SNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILS 184

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  S+L+ YA++  +  A ++F  +S  +DV  W+ MIGG+   G   +   +  +M+ E
Sbjct: 185 VQNSLLSLYAEV-HMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTE 243

Query: 241 -GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            GI  D  T ++ L+ C+ + D  +G  +HGL+I   +E  + + N+LIDMY K   +  
Sbjct: 244 AGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHS 303

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           AFK F+ + +K++ISWN +   +  N++  +  +L    +  G+  + VT + +L+    
Sbjct: 304 AFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKH 363

Query: 360 LLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
            LD      L+C ++H      G+   E + +S+I  + +C  VE+A  VFD ++ K++ 
Sbjct: 364 FLD-----SLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVV 418

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W+ +++G+  N    + +  F  + E  +  N  +   ++E C  S   +     HG  
Sbjct: 419 AWSTMIAGFARNGKPDEAISVFKQMNEEVIP-NNVSIMNLMEACAVSAELRQSKWAHGIA 477

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           ++ G +S   I +S+I  Y   G ++ S    N   + ++  W AM+SA    G  HEA+
Sbjct: 478 VRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEAL 537

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDA 593
            +F  + + G KP+     ++L++C+  G  +   S     V K G    +   S ++D 
Sbjct: 538 MLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDM 597

Query: 594 YAKCGDIKGA 603
            ++ G    A
Sbjct: 598 LSRAGKFNEA 607



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 271/556 (48%), Gaps = 45/556 (8%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN-LVSWTL 115
           LK    G   HG+I + GF+  + +QN+L+++Y++   + +  ++F EM+ RN +VSW++
Sbjct: 161 LKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMY-FAHKLFGEMSVRNDVVSWSV 219

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++   +Q GE + G  M+ +M T  G  P+   V SV+K C ++     G  +H   +  
Sbjct: 220 MIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFR 279

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            +E + FVG S+++ Y+K  +V +A + F  I   ++  WN M+  Y       EAL ++
Sbjct: 280 GLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALL 339

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
            +M+ EG   D+ T  N LQ      D    R +HG+IIR   E +  ++N++ID Y K 
Sbjct: 340 GTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKC 399

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           + ++ A  VF+ M  KDV++W+T+  GF+ N  P +  S+F K +     PN+V+   L+
Sbjct: 400 NLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVF-KQMNEEVIPNNVSIMNLM 458

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C    +L        +A+  G   E ++ +S+I M+ +CG +E +   F+ +  KN+ 
Sbjct: 459 EACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVV 518

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W+ ++S +  N    + L  F  I ++G + N  T   ++  C            HG +
Sbjct: 519 CWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACS-----------HGGL 567

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           ++ G S   +  S + K  +  G                +  +  ++  L   G  +EA+
Sbjct: 568 MEEGLS---FFTSMVQKHGIEPG----------------LEHYSCIVDMLSRAGKFNEAL 608

Query: 535 TIFHSL---VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAV 590
            +   L   +EAG      I GT+L+SC + G           V++L   ++  Y+ ++ 
Sbjct: 609 ELIEKLPKEMEAGAS----IWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLAS- 663

Query: 591 IDAYAKCG-DIKGARM 605
            + YA CG  I  A+M
Sbjct: 664 -NLYANCGLMIDSAKM 678



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 7/391 (1%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +++ +  D + +   L    NLK   LGT VHG ++  G  +D+F+ N+LI MYSKC   
Sbjct: 242 TEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNV 301

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               + F E+ E+N++SW L++SA I N      L +   M   G   +E  + +V+++ 
Sbjct: 302 HSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIA 361

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                S    S+H   ++   E N  +  SV++ YAK   V  A  VF  ++  DV  W+
Sbjct: 362 KHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWS 421

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI G+A  G   EA++V   M  E +  +  + +N ++ C++ A+    +  HG+ +R 
Sbjct: 422 TMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR 480

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +   + I  ++IDMY K   ++ + + F ++  K+V+ W+ +   F  N    +   LF
Sbjct: 481 GLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLF 540

Query: 336 HKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
            K   +G++PN VT   LL  C  G L++  L      +  H G        S ++ M  
Sbjct: 541 EKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKH-GIEPGLEHYSCIVDMLS 599

Query: 394 RCGAVEMAHSVFDNVSYK---NITTWNELLS 421
           R G    A  + + +  +     + W  LLS
Sbjct: 600 RAGKFNEALELIEKLPKEMEAGASIWGTLLS 630


>gi|302796687|ref|XP_002980105.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
 gi|300152332|gb|EFJ18975.1| hypothetical protein SELMODRAFT_111767 [Selaginella moellendorffii]
          Length = 696

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 187/697 (26%), Positives = 327/697 (46%), Gaps = 9/697 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I L  ++S    L   + G Q+H  I+  G    + L N+L+ MY KCG      
Sbjct: 6   VQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEAR 65

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             FD M ER+L+SW  +++   Q+      +++Y   +  G  P+E    S++  C + G
Sbjct: 66  NAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASG 125

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             +FG  +H   L      +  V   +++ Y+  G +  A  VF      DV  W  +I 
Sbjct: 126 DLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTTVIA 185

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y   G    A      M  EG+  ++ TF+  L  CS +   + G+ +H L + S ++ 
Sbjct: 186 AYTRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSGLDF 245

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKF 338
           S+ + N+LI MY K S +  A  VF+RM   ++VI+W  +  G ++ ++      L  + 
Sbjct: 246 SLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLCREM 305

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           +L G RP  VTF+ LL  C     L +G  +       G   +  V ++L+ M+ + G +
Sbjct: 306 MLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMYSKSGGL 365

Query: 399 EMAHSVF-DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           E A  VF D       ++W  ++  Y  +    +  + + ++   G+EV+   F  V+  
Sbjct: 366 EDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDENVFASVLGF 425

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C   ++   V  +H  I+ +G        ++++ +Y   G  D + E   G  R  + SW
Sbjct: 426 C---DSATQVRDVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVFLGISRPSVISW 482

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            A+++A    G + EA+  F  +   G KP+   L ++L +CA +GA+++ + IH  V+ 
Sbjct: 483 SALIAAY---GQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLA 539

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
             +     V +A    YAKC  +  A   F  S    D + +N ++ AYA  GL  +A+ 
Sbjct: 540 GPYAQNTTVLNAAASLYAKCSRVADASRVF-SSIPCKDAVSWNAIVSAYAKQGLFRDAIF 598

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +  +M++    P   TF++++ +CS  G +   C    SM   +GM P+ + Y CL+D+L
Sbjct: 599 LSRQMQVEGFVPDDITFITILYSCSQSGQLAAACECLSSMVCDFGMVPAREHYVCLIDVL 658

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            R G + DA  + + MP++       SL +  RI  N
Sbjct: 659 GRAGRVGDAVELKDCMPYEADAVALESLRAASRITQN 695



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 147/538 (27%), Positives = 244/538 (45%), Gaps = 11/538 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   G   +E  + + +  C ++G S  G  IH   L   +  +  +  S++  Y K G 
Sbjct: 1   MDLEGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           V  A   F  +   D+  WNAMI  YA    G +A+ + +    EG   D+ TF + L  
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C    D   GR +H   + +       + N LI MY     +D A  VFE     DV +W
Sbjct: 121 CFASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTW 180

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            T+   ++ +       + + K    G R N +TF  +L  C  L  L+ G  +  LAL 
Sbjct: 181 TTVIAAYTRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALG 240

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLK 434
            G      + +SLI M+ +C ++  A  VFD + Y +N+ TW  +++G+   C D     
Sbjct: 241 SGLDFSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHA-QCEDLAGGI 299

Query: 435 TFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             C  +   GV     TF  +++ C   E   +   IHG +   G  S   + ++L+  Y
Sbjct: 300 YLCREMMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYVRLGGMESDSAVNNALVNMY 359

Query: 494 VNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
              G L+++ + F++  + L  +SW +++ A V  G   EA  ++H L   G + DE + 
Sbjct: 360 SKSGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKREATELYHHLDLEGMEVDENVF 419

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            ++L  C    +  + + +H  ++  G    +  A+AV+ AY K G    AR  F    +
Sbjct: 420 ASVLGFC---DSATQVRDVHSRILASGLEQRMVAANAVMTAYGKAGHPDEAREVF-LGIS 475

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
              VI ++ LI AY  H    EA++ F+ M L  ++P+  T  SV+ AC+  G  ++G
Sbjct: 476 RPSVISWSALIAAYGQHW---EAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQG 530



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 181/397 (45%), Gaps = 1/397 (0%)

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           L G + + +T    +  C  L D   G Q+    L  G      +++SL+YM+ +CG+VE
Sbjct: 3   LEGVQGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVE 62

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A + FD +  +++ +WN +++ Y  + C    ++ +      G + +  TF  ++  C 
Sbjct: 63  EARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACF 122

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
            S + +    +H   + T F S   +C+ LI  Y + G LD++      + + D+ +W  
Sbjct: 123 ASGDLKFGRLLHEHFLGTNFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFQPDVCTWTT 182

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++A    G    A   +  + + G + +E    T+L++C+++   +  K +H   +  G
Sbjct: 183 VIAAYTRHGKLECAFATWRKMHQEGLRSNEITFLTVLDACSSLEVLETGKHVHRLALGSG 242

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
            +  + + +++I  Y KC  +  AR  FD+     +VI +  ++  +A    ++  + + 
Sbjct: 243 LDFSLRMENSLISMYGKCSSLGDARDVFDRMRYRRNVITWTAMVAGHAQCEDLAGGIYLC 302

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +M L  ++P   TF  ++  C  +  +  G  +   +    GM+        LV+M S+
Sbjct: 303 REMMLEGVRPQPVTFAGLLDGCRGREALAVGASIHGYV-RLGGMESDSAVNNALVNMYSK 361

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           +G LEDA  V          + + S++     HG K 
Sbjct: 362 SGGLEDAVKVFNDQRQDLKTSSWASVIGAYVQHGLKR 398


>gi|242073178|ref|XP_002446525.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
 gi|241937708|gb|EES10853.1| hypothetical protein SORBIDRAFT_06g017520 [Sorghum bicolor]
          Length = 910

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 212/815 (26%), Positives = 381/815 (46%), Gaps = 92/815 (11%)

Query: 40  LRKDPIFLAKSLSLSENLKSR--VLGTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYF 95
           LR   + LA ++  +  L      L   +HG  VK G   ++    +  + A   + G  
Sbjct: 68  LRPGALELAAAIRSASALPGGGGALARCLHGLAVKSGRVASSATVAKAVMDAYGRRLGSL 127

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF----MPNEFAVGSV 151
              L VFDEMA  + V W ++++A  + G F+    ++  M + G     MP    V  +
Sbjct: 128 ADALLVFDEMARPDAVCWNILITACSRRGLFEDAFVLFRSMLSCGVVEQSMPTAVTVAVI 187

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA---AERVFYSISS 208
           +  C   G    G S+H + +K  +E +   G ++++ YAK G   A   A R F SI  
Sbjct: 188 VPACAKWGHLRTGRSVHGYVVKTGLESDTLCGNALVSMYAKCGGSRAMDDAHRAFSSIRC 247

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GR 266
            DV  WN++I GY       EAL +   M  +G   +  T  + L  CS   +F    G+
Sbjct: 248 KDVVSWNSVIAGYIENRLFQEALALFGQMTSQGSLPNYSTVASILPVCSFT-EFGRYHGK 306

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           ++H  ++R  +E  +S+ NAL+  Y K   +     +F  M  +D++SWNT+  G+  N 
Sbjct: 307 EVHSFVVRHGLEMDVSVSNALMTHYSKVLEVKAVESIFMSMDVRDIVSWNTIIAGYVMNG 366

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG-FLDEENVT 385
              +   LFH+ + +G  P+ V+F  LL  C ++ D+  G+ +    L     L E ++ 
Sbjct: 367 YHYRALGLFHELLSTGIAPDSVSFISLLTACAQVGDVKAGMGVHGYILQRPVLLQETSLM 426

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++L+  +  C   + A   F ++  K+  +WN +LS               C   E  +E
Sbjct: 427 NALVTFYSHCDRFDDAFRAFTDILNKDSISWNAILSA--------------CAHSEQHIE 472

Query: 446 VNGCTFFYVVETCCRSENQ------------------QMVGQIHGAIIKTGFSSCGYICS 487
                FF ++   CR  NQ                  +MV + HG  ++ G++    + +
Sbjct: 473 ----KFFVLMSEMCRGVNQWDSVTVLNVIHVSTFCGIKMVREAHGWSLRVGYTGETSVAN 528

Query: 488 SLIKSYVNFGQL--------------------------------DNSFEFSNGAERLDMA 515
           +++ +YV  G                                  D    F++ AE+ D+ 
Sbjct: 529 AILDAYVKCGYSHDANILFRNHGGRNTVTDNIMISCYLKNNCIEDAEVIFNHMAEK-DLT 587

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  M+        + +A ++F+ L   G KPD   +  IL +C  + + Q  +  H ++
Sbjct: 588 SWNLMIQLYAQNHMDDQAFSLFNHLQSEGLKPDLVSITNILEACIHLCSVQLVRQCHAYM 647

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           ++     ++++  A++DAY+KCG+I  A   F+ S  S D++ +  +I  YA HG+  +A
Sbjct: 648 LRASLE-DIHLEGALVDAYSKCGNITNAYNIFEVS--SKDLVTFTAMIGCYAMHGMAEKA 704

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +E+F KM   +++P      +++SACSH GLVD G  +FKS+   + + P+ + Y C+VD
Sbjct: 705 VELFSKMIKLDIRPDHVVLTTLLSACSHAGLVDAGIKIFKSIGEIHRVVPTAEHYACMVD 764

Query: 696 MLSRNGYLEDA-KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           +L+R+G+L+DA    +++ P   +   + SLL  C++HG  ++G+ A+++L  +   +  
Sbjct: 765 LLARSGHLQDAYMFALDMPPHAVNANAWSSLLGACKVHGEIKIGQLAADQLFSMEEGDIG 824

Query: 755 AHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLK 789
            +V++S      E      +GV +V   +K+ D+K
Sbjct: 825 NYVIMSNIYAADE----KWDGVEHVRKLMKSKDMK 855


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 187/642 (29%), Positives = 324/642 (50%), Gaps = 12/642 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++++ +  G    G +IH F  K+  + + F G +++N Y K   +  A+ VF  +   +
Sbjct: 84  LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRN 143

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
              W  +I G+           +   M + G   +++T    LQ C  + +   G QIHG
Sbjct: 144 TITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHG 203

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +I+   +  + +  +LI MY +   +  A KV+  +A KDV   N +   + +     +
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +F   + SG  PN  TF+ ++  C   +D+++   L  + + CG  DE +V ++++ 
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           ++ + G +E A   F  +  +N+ +W  LLSGY  N      L+ F  I E GV  + C 
Sbjct: 324 VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCC 383

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  +++ C   +N  +  QIHG ++K G+     + ++LI  Y    +L ++    +   
Sbjct: 384 FATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLL 443

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             ++ S+ A++S  +      +A+ +F  L  A  KPD      +L+  A      + K 
Sbjct: 444 DKNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKC 502

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H ++IK GF     V +AVI  YAKCG I  A   F  S N  D I +N +I AYA HG
Sbjct: 503 LHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLF-YSMNYLDSISWNAVISAYALHG 561

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
              +A+ +F++MK     P + T +SV+ ACS+ GL+++G  LF  M+S+YG++P  + +
Sbjct: 562 QGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHF 621

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R GYL +A   I   PF  SP ++R+L+  C++HG+   G+ AS+ LL L P
Sbjct: 622 ACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAP 681

Query: 751 KNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTV--DLKL 790
           +   +++L+S        NL    G+ N    ++TV  DLK+
Sbjct: 682 EEAGSYILVS--------NLYAGGGMLNEAARVRTVMNDLKV 715



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/641 (26%), Positives = 320/641 (49%), Gaps = 7/641 (1%)

Query: 42  KDPIF--LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++P+F    + L +S      +LG  +H  + KLG+ ND F  NNL+ +Y K    G   
Sbjct: 74  QNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQ 133

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFDEM  RN ++WT ++   +Q  + +   ++  +M   G   NE     +++ C S+ 
Sbjct: 134 SVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLE 193

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH F +K   +++ FVG S+++ Y++ GD+ AAE+V+ +++  DV C N MI 
Sbjct: 194 NLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMIS 253

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y   G G +A+ V   +L  G+  + YTF N +  C+   D ++ R +HG+ I+     
Sbjct: 254 EYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGD 313

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            IS+ NA++ +Y+K   ++ A K F  M +++++SW  L  G+ +N N  +    F + +
Sbjct: 314 EISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQIL 373

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G   +   F+ LL  C +  +L LGLQ+    +  G++ + +V ++LI ++ +C  + 
Sbjct: 374 ELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLR 433

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF ++  KNI ++N +LSGY     + D +  F  +  + ++ +  TF  ++    
Sbjct: 434 SARLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSA 492

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                     +H  IIKTGF +   + +++I  Y   G + ++ +       LD  SW A
Sbjct: 493 DQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNA 552

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKL 578
           ++SA    G   +A+ +F  + +    PDE  + ++L +C+  G  +    + +    K 
Sbjct: 553 VISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKY 612

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G   E+   + ++D   + G +  A    ++S  S   +++ TL+     HG ++   +I
Sbjct: 613 GIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFG-QI 671

Query: 639 FDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMD 678
             K  L +L P +A +++ V +  +  G++++   +   M+
Sbjct: 672 ASK-HLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMN 711



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 69/126 (54%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +  A+ LSLS +    V G  +H +I+K GF  +  + N +I MY+KCG  G   
Sbjct: 477 IKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDAC 536

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F  M   + +SW  ++SA   +G+    L ++ +MK   F+P+E  + SV++ C   G
Sbjct: 537 QLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYSG 596

Query: 160 ASEFGY 165
             E G+
Sbjct: 597 LLEEGF 602


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/702 (26%), Positives = 336/702 (47%), Gaps = 27/702 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I      +D+ +   ++  Y KCG+      VFD M++R++V W  +V   + 
Sbjct: 79  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPF 181
            G ++  + +  +M      PN   + +++  C        G  +H + L+  + + NP 
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++ FY +  D+     +F  +   ++  WNAMI GY   G  F+AL +   ML + 
Sbjct: 199 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T + A+Q C+ +    +G+QIH L I+ E    + I+NAL++MY  +  ++ + 
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++FE + ++D   WN++   ++      +   LF +    G + +  T  I+L  C +L 
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377

Query: 362 D-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G  L    +  G   + ++ ++L+ M+     VE    +FD +   +I +WN ++
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMI 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
                N   A   + F  + ES ++ N  T   ++  C           IHG ++K    
Sbjct: 438 LALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIE 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L   Y+N G    + +   G    D+ SW AM+                   
Sbjct: 498 INQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXK----------------- 540

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT--EVYVASAVIDAYAKCG 598
                +P+   +  +L+S   +    + +S+H +V + GF+   ++ +A+A I  YA+CG
Sbjct: 541 ----AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCG 596

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ A   F ++    ++I +N +I  Y  +G  S+AM  F +M     +P+  TFVSV+
Sbjct: 597 SLQSAENIF-KTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVL 655

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH G ++ G  LF SM   + + P    Y C+VD+L+R G +++A+  I+ MP +P 
Sbjct: 656 SACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPD 715

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +V+R+LLS CR + + +  +   EKL  L P N   +VLLS
Sbjct: 716 ASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLS 757



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/588 (24%), Positives = 280/588 (47%), Gaps = 26/588 (4%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L  Y  M++ G +PN   +  V+K C +  A E G SIH       +  +  VG +V++F
Sbjct: 45  LSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDF 104

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G V  A  VF ++S  DV  WNAM+ GY   G   EA+ +V  M  E +  +  T 
Sbjct: 105 YCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTM 164

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +  L  C   ++  +GR +HG  +R+ + + +  +  ALI  Y++   M     +F+ M 
Sbjct: 165 VALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMV 223

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++++SWN +  G+ +  +  +   LF + ++   + + VT  + ++ C +L  L LG Q
Sbjct: 224 VRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQ 283

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  LA+   F+++  + ++L+ M+   G++E +H +F++V  ++   WN ++S Y    C
Sbjct: 284 IHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGC 343

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICS 487
             + +  F  +   GV+ +  T   ++  C    +  + G+ +H  +IK+G      + +
Sbjct: 344 HEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGN 403

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  Y     +++  +  +  + +D+ SW  M+ AL       +A  +F  + E+  KP
Sbjct: 404 ALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKP 463

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           + Y + +IL +C  +      +SIH +V+K        + +A+ D Y  CGD   AR  F
Sbjct: 464 NSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLF 523

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     D+I +N +I                        +P+  T ++V+S+ +H   +
Sbjct: 524 -EGCPDRDLISWNAMI---------------------XKAEPNSVTIINVLSSFTHLATL 561

Query: 668 DKGCLLFKSMDSQ-YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            +G  L   +  + + +          + M +R G L+ A+++ + +P
Sbjct: 562 PQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 609



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/553 (24%), Positives = 246/553 (44%), Gaps = 41/553 (7%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S  LG Q+H   +K  F  D+++ N L+ MYS  G      ++F+ +  R+   W  +
Sbjct: 275 LGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSM 334

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF-GYSIHCFALKIR 175
           +SA    G  +  + +++ M++ G   +E  V  ++ +C  + +    G S+H   +K  
Sbjct: 335 ISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSG 394

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  +  +G ++L+ Y +L  V + +++F  +   D+  WN MI   A      +A  +  
Sbjct: 395 MRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFE 454

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M    I  + YT I+ L  C  V   D GR IHG +++  +E +  +  AL DMY+   
Sbjct: 455 RMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCG 514

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A  +FE   D+D+ISWN +                     +  + PN VT   +L 
Sbjct: 515 DEATARDLFEGCPDRDLISWNAM---------------------IXKAEPNSVTIINVLS 553

Query: 356 QCGKLLDLDLGLQLQCLALHCGF---LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
               L  L  G  L       GF   LD  ++ ++ I M+ RCG+++ A ++F  +  +N
Sbjct: 554 SFTHLATLPQGQSLHAYVTRRGFSLGLD-LSLANAFITMYARCGSLQSAENIFKTLPKRN 612

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I +WN +++GY  N   +D +  F  + E G   NG TF  V+  C  S   +M  Q+  
Sbjct: 613 IISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFH 672

Query: 473 AIIKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGH 529
           ++++  F+    +   S ++      G +D + EF +      D + W A++S+      
Sbjct: 673 SMVQD-FNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSD 731

Query: 530 NHEAVTIFHSL-----VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
             +A TIF  L     + AG     Y+L  + N  A  G +   + I  ++ + G     
Sbjct: 732 AKQAKTIFEKLDKLEPMNAG----NYVL--LSNVYATAGLWLEVRRIRTWLKEKGLRKPP 785

Query: 585 YVASAVIDAYAKC 597
            ++  ++     C
Sbjct: 786 GISWIIVKNQVHC 798



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 141/564 (25%), Positives = 259/564 (45%), Gaps = 16/564 (2%)

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           I   D   WN++I   A+       L+  + M   G+  +  T    L+ C+     + G
Sbjct: 20  IQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERG 79

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           + IH  I  +++   + +  A++D Y K   ++ A  VF+ M+D+DV+ WN +  G+   
Sbjct: 80  KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGW 139

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE-ENV 384
               +   L  +      RPN  T   LL  C    +L LG  +    L  G  D   +V
Sbjct: 140 GCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHV 199

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA-DVLKTFCNIWESG 443
            ++LI  + R   + +   +FD +  +NI +WN ++SGY ++  D    L+ F  +    
Sbjct: 200 ATALIGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGY-YDVGDYFKALELFVQMLVDE 257

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           V+ +  T    V+ C    + ++  QIH   IK  F    YI ++L+  Y N G L++S 
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +        D   W +M+SA    G + EA+ +F  +   G K DE  +  +L+ C  + 
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377

Query: 564 A-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           +   + KS+H  VIK G   +  + +A++  Y +   ++  +  FD+     D+I +NT+
Sbjct: 378 SGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDR-MKGVDIISWNTM 436

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I+A A + L ++A E+F++M+ + ++P+  T +S+++AC      D  CL F      Y 
Sbjct: 437 ILALARNTLRAQACELFERMRESEIKPNSYTIISILAACE-----DVTCLDFGRSIHGYV 491

Query: 683 MQPSPDC----YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           M+ S +        L DM    G    A+ + E  P +   + + +++     +    + 
Sbjct: 492 MKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLIS-WNAMIXKAEPNSVTIIN 550

Query: 739 EWASEKLLLLLPKNDAAHVLLSKR 762
             +S   L  LP+  + H  +++R
Sbjct: 551 VLSSFTHLATLPQGQSLHAYVTRR 574



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/306 (20%), Positives = 129/306 (42%), Gaps = 25/306 (8%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++ +   +   L+  E++     G  +HG+++K     +  L+  L  MY  CG   
Sbjct: 458 ESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEA 517

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F+   +R+L+SW  ++  A                      PN   + +V+    
Sbjct: 518 TARDLFEGCPDRDLISWNAMIXKA---------------------EPNSVTIINVLSSFT 556

Query: 157 SMGASEFGYSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            +     G S+H +  +    +  +  +  + +  YA+ G + +AE +F ++   ++  W
Sbjct: 557 HLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISW 616

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLII 273
           NAMI GY   G G +A+   S ML +G   +  TF++ L  CS     ++G Q+ H ++ 
Sbjct: 617 NAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQ 676

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTA 332
              V   +   + ++D+  +   +D A +  + M  + D   W  L        +  Q  
Sbjct: 677 DFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAK 736

Query: 333 SLFHKF 338
           ++F K 
Sbjct: 737 TIFEKL 742


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 184/642 (28%), Positives = 324/642 (50%), Gaps = 57/642 (8%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS----------ISSDD-VGCW 214
            +HC   K  +++ P     ++N  A   ++A+ E + Y+          + SDD +   
Sbjct: 43  QLHCQITKNGLDQIPSTLTKLVNAGA---EIASPESLDYARKAFELFKEDVRSDDALFML 99

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N++I GY+  G G EA+ +   ML  G+T + YTF   L GC+ +A F  G Q+HG +++
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +E  + I N LI  Y +   MD+  KVFE M++++V+SW +L  G++    P +  SL
Sbjct: 160 MGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F + + +G RP+ VT   ++  C KL DLD+G ++       G    + + ++L+ M+ +
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CGA++ A  +FD    +N+  +N +LS Y       + L     + + G   +  T    
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339

Query: 455 VETCCRSENQQMV----GQI-HGAIIKTG--------------FSSCG---YIC------ 486
           +     S + Q+V    G++ HG +I+ G              +  CG     C      
Sbjct: 340 I-----SASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLM 394

Query: 487 --------SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                   +SL   ++  G +++++E  N     +   W  M+S LV +    +A+ +F 
Sbjct: 395 SNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFR 454

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G K D   +  I ++C  +GA +  K +H ++ K G   ++ + +A++D +A+CG
Sbjct: 455 EMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCG 514

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           D + A   F++     DV  +   I   A  G    A  +F++M +  ++P    FV V+
Sbjct: 515 DPQSAMQVFNK-MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 573

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           +ACSH G V++G  +F  M+  +G+ P  + YGC+VD+L R G L +A  +I+ MP +P+
Sbjct: 574 TACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPN 632

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ SLL+ CR+H N E+  +A+E++  L P+    HVLLS
Sbjct: 633 DVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLS 674



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 237/528 (44%), Gaps = 65/528 (12%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVHG +VK+G   D+F+QN LI  Y++CG+   G +VF+ M+ERN+VSWT ++    +
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  + ++ +M   G  P+   +  V+  C  +   + G  +  +  ++ ++ N  +
Sbjct: 210 GDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVM 269

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y K G + AA+R+F      ++  +N ++  YA  G   EAL ++  ML +G 
Sbjct: 270 VNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGP 329

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+ T ++A+   + + D   G+  HG +IR+ +E   SI N +IDMY+K    + A +
Sbjct: 330 RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACR 389

Query: 303 VFERMADKDVISWNTLFGGFSENKN-----------PGQTA------------------- 332
           VF+ M++K V+SWN+L  GF  N +           P + A                   
Sbjct: 390 VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDA 449

Query: 333 -SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             LF +    G + + VT   +   CG L   +L   +       G   +  + ++L+ M
Sbjct: 450 IELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDM 509

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           F RCG  + A  VF+ ++ ++++ W   +               F  +   GV+ +   F
Sbjct: 510 FARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLF 569

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V+  C            HG  ++ G         SL++ +    Q+++          
Sbjct: 570 VQVLTACS-----------HGGQVEQGLH-----IFSLMEDHGISPQIEH---------- 603

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
                +G M+  L   G   EA  +  S+     +P++ + G++L +C
Sbjct: 604 -----YGCMVDLLGRAGLLREAFDLIKSM---PMEPNDVVWGSLLAAC 643



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/556 (22%), Positives = 246/556 (44%), Gaps = 41/556 (7%)

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           +YV M   G  PN +    V+  C  + A   G  +H   +K+ +E++ F+   +++FYA
Sbjct: 118 LYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYA 177

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           + G +    +VF  +S  +V  W ++I GYA      EA+++   M+  GI     T + 
Sbjct: 178 ECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVC 237

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            +  C+ + D D+G ++   I    ++ +  +VNAL+DMY+K   +D A ++F+   D++
Sbjct: 238 VISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRN 297

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           ++ +NT+   ++      +  ++  + +  G RP+ VT    +    +L+DL  G     
Sbjct: 298 LVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG 357

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN----- 426
             +  G    +++ + +I M+ +CG  EMA  VFD +S K + +WN L +G+  N     
Sbjct: 358 YVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVES 417

Query: 427 --------------------------CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
                                         D ++ F  +   G++ +  T   +   C  
Sbjct: 418 AWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGY 477

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++   +H  I K G      + ++L+  +   G   ++ +  N     D+++W A 
Sbjct: 478 LGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAA 537

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +  +  +G+   A  +F+ ++  G KPD  +   +L +C+  G  ++   I   +   G 
Sbjct: 538 IGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGI 597

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFD----QSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           + ++     ++D   + G +   R AFD         NDV V+ +L+ A   H  V   M
Sbjct: 598 SPQIEHYGCMVDLLGRAGLL---REAFDLIKSMPMEPNDV-VWGSLLAACRVHKNVE--M 651

Query: 637 EIFDKMKLANLQPSQA 652
             +   ++  L P +A
Sbjct: 652 ATYAAERINELAPQRA 667



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/418 (22%), Positives = 172/418 (41%), Gaps = 32/418 (7%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           ++ +R   + +   +S    L+   +G +V  +I +LG   +  + N L+ MY KCG   
Sbjct: 225 EAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAID 284

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R+FDE  +RNLV +  I+S   + G     L +  +M   G  P+   + S +    
Sbjct: 285 AAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASA 344

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL----------------------- 193
            +    +G   H + ++  +E    +G  +++ Y K                        
Sbjct: 345 QLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNS 404

Query: 194 --------GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
                   GDV +A  VF  I   +   WN MI G        +A+ +   M  EGI  D
Sbjct: 405 LTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKAD 464

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T +     C  +   ++ + +H  I ++ + C + +  AL+DM+ +      A +VF 
Sbjct: 465 RVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFN 524

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           +M ++DV +W    G  +   N      LF++ ++ G +P+ V F  +L  C     ++ 
Sbjct: 525 KMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQ 584

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
           GL +  L    G   +      ++ +  R G +  A  +  ++  + N   W  LL+ 
Sbjct: 585 GLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/358 (23%), Positives = 150/358 (41%), Gaps = 36/358 (10%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + +  ++S S  L     G   HG++++ G      + N +I MY KCG      R
Sbjct: 330 RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACR 389

Query: 101 VFDEMA-------------------------------ERNLVSWTLIVSAAIQNGEFDMG 129
           VFD M+                               ERN V W  ++S  +Q   F+  
Sbjct: 390 VFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDA 449

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           ++++ +M+  G   +   +  +   C  +GA E    +H +  K  I  +  +  ++++ 
Sbjct: 450 IELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDM 509

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           +A+ GD  +A +VF  ++  DV  W A IG  A  G G  A  + + ML +G+  D   F
Sbjct: 510 FARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLF 569

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA- 308
           +  L  CS     + G  I  L+    +   I     ++D+  ++  +  AF + + M  
Sbjct: 570 VQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPM 629

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPN-HVTFSILLRQCGKLLDL 363
           + + + W +L      +KN  + A+   + I  L+  R   HV  S +    GK  D+
Sbjct: 630 EPNDVVWGSLLAACRVHKNV-EMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDV 686


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 183/708 (25%), Positives = 349/708 (49%), Gaps = 14/708 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +VH   V  G      L   L++ YS  G  G     F      +   W  ++       
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI----EKNP 180
           +F   L  +  M  +G  P+ F           +GA   G ++H + ++  +      + 
Sbjct: 91  DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF- 239
            V  S++  YA+ G+V  A +VF  +   DV  W A+I G    G   E L  +  M+  
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210

Query: 240 ---EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
                +  +  T  + L+ C ++ + + GR +HG +++  +  S  +++AL  MY K   
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            + A  +F  + +KDV+SW +L G +       +   LF + + SG +P+ +  S +L  
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            G   ++  G     +     F D   + ++LI M+ +   V+ A  VF  +  ++  +W
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGC---TFFYVVETCCRSENQQMVGQIHGA 473
           N ++ GYC   CD   L+ +  +         C   +    + +C R    ++    H  
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCY 450

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHE 532
            IK        + + LI  Y   G+ D++ + F     + D+ +W  ++S+  H GH++ 
Sbjct: 451 SIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNA 510

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A++++  ++  G  P+   L T++++CA + A +R + IH +V ++G++ +V + +A+ID
Sbjct: 511 AMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALID 570

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG +  AR  FD S   +DV+ +N +I  Y  HG   +A+E+F KM+  +++P+  
Sbjct: 571 MYAKCGQLGIARRIFD-SMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGV 629

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF++++SA  H GL+++G  +F  M  +Y ++P+   Y C+VD+L ++G+L++A+ ++  
Sbjct: 630 TFLAILSALCHSGLLEEGRKVFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 688

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MP +P   ++ +LLS C++H N E+G   ++K     P+N+  ++L+S
Sbjct: 689 MPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILIS 736



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 230/505 (45%), Gaps = 46/505 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG++VK+G  +   + + L +MYSKC        +F E+ E+++VSWT ++    +
Sbjct: 239 GRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCR 298

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     ++++  M  +G  P+E  V  V+    + G    G + H    K     +  +
Sbjct: 299 RGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLI 358

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y K   V +A RVF  +   D   WN M+ GY   G   + L +   M     
Sbjct: 359 GNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLR-- 416

Query: 243 TMDKYTF-------INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
             DKY F       ++A+  CS +A+  +GR  H   I+  ++   S+ N LI MY +  
Sbjct: 417 --DKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCG 474

Query: 296 GMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             D+A K+F     K DV++WNTL   ++   +     SL+ + ++ G  PN  T   ++
Sbjct: 475 KFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVI 534

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L+ L+ G ++       G+  + ++ ++LI M+ +CG + +A  +FD++   ++ 
Sbjct: 535 SACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVV 594

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN ++SGY  +      L+ F  +    ++ NG TF  ++   C           H  +
Sbjct: 595 AWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALC-----------HSGL 643

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           ++ G            K +   G+   S E        ++  +  M+  L   GH  EA 
Sbjct: 644 LEEGR-----------KVFTRMGKY--SLE-------PNLKHYACMVDLLGKSGHLQEAE 683

Query: 535 TIFHSLVEAGEKPDEYILGTILNSC 559
            +  ++     +PD  I GT+L++C
Sbjct: 684 DMVLAMP---IEPDGGIWGTLLSAC 705



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 152/322 (47%), Gaps = 4/322 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S L+ D I ++  LS   N  +   G   H  I K  F + + + N LI+MY K     
Sbjct: 314 ESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVD 373

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG---FMPNEFAVGSVMK 153
              RVF  + +R+  SW L+V    + G     L++Y +M+      F     ++ S + 
Sbjct: 374 SAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAIS 433

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVG 212
            C  +     G S HC+++K  ++++  V   ++  Y + G    A ++F  +    DV 
Sbjct: 434 SCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVV 493

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN +I  YAH G+   A+++   ML EG+T +  T I  +  C+ +   + G +IH  +
Sbjct: 494 TWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYV 553

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
                +  +SI  ALIDMY K   +  A ++F+ M   DV++WN +  G+  +    Q  
Sbjct: 554 KEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQAL 613

Query: 333 SLFHKFILSGSRPNHVTFSILL 354
            LF K      +PN VTF  +L
Sbjct: 614 ELFGKMEGGSIKPNGVTFLAIL 635



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 1/180 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  +   L   +S   NL +   G ++H ++ ++G+  D+ +   LI MY+KCG  G   
Sbjct: 523 LTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIAR 582

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD M + ++V+W +++S    +GE    L+++  M+     PN     +++      G
Sbjct: 583 RIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSG 642

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
             E G  +     K  +E N      +++   K G +  AE +  ++    D G W  ++
Sbjct: 643 LLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLL 702


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  297 bits (760), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 310/599 (51%), Gaps = 4/599 (0%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           + HC A+K+    +P+   +++  YAK  ++ +A +VF  +   D   WNA+I  +A  G
Sbjct: 14  ATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSG 73

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
                  ++ +M       D  TF + L+G + V    +G+Q+H ++++  +  ++   +
Sbjct: 74  DLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGS 133

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY K   +D  + VF+ M +++ +SWNTL   +S   +      +     L G   
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEI 193

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T S LL      +   L +QL C  +  G      V ++ I  +  C +++ A  VF
Sbjct: 194 DDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVF 253

Query: 406 DN-VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           D  V  +++ TWN +L  Y  +  +    K F ++   G E +  T+  +V  C   E++
Sbjct: 254 DGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHK 313

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ--LDNSFEFSNGAERLDMASWGAMMS 522
                +HG +IK G  +   + ++LI  Y+ F    ++++       +  D  +W ++++
Sbjct: 314 TCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILA 373

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
             V  G + +A+ +F  +     + D Y    ++ SC+ +   Q  +  H   +K+GF+T
Sbjct: 374 GYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDT 433

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             YV S++I  Y+KCG I+ AR +F+ +   N  IV+N++I  YA HG  + A+++F  M
Sbjct: 434 NSYVGSSLIFMYSKCGIIEDARKSFEATSKDN-AIVWNSIIFGYAQHGQGNIALDLFYMM 492

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           K   ++    TFV+V++ACSH GLV++GC   +SM+S +G+ P  + Y C +D+  R G+
Sbjct: 493 KERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGH 552

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           L+ A  ++E MPF+P   V ++LL  CR  G+ EL    ++ LL L P+    +V+LS+
Sbjct: 553 LKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSE 611



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/598 (25%), Positives = 265/598 (44%), Gaps = 6/598 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            H   +KLG   D +  NNLI  Y+KC       +VFDEM  R+ VSW  I+SA   +G+
Sbjct: 15  THCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGD 74

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            D   ++   M+ +    +    GS++K    +G  + G  +H   LK+ + +N F G +
Sbjct: 75  LDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSA 134

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +L+ YAK G V     VF S+   +   WN ++  Y+  G    A  V+S M  EG+ +D
Sbjct: 135 LLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEID 194

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T    L        + +  Q+H  I++  +E   ++ NA I  Y +   +  A +VF+
Sbjct: 195 DGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFD 254

Query: 306 -RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             +  +D+++WN++ G +  ++       +F      G  P+  T++ ++  C       
Sbjct: 255 GAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKT 314

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCG--AVEMAHSVFDNVSYKNITTWNELLSG 422
            G  L  L +  G  +   V+++LI M+ R     +E A  +F ++  K+  TWN +L+G
Sbjct: 315 CGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAG 374

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       D L+ F  +    +E++  TF  V+ +C      Q+  Q H   +K GF + 
Sbjct: 375 YVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTN 434

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ SSLI  Y   G ++++ +      + +   W +++      G  + A+ +F+ + E
Sbjct: 435 SYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKE 494

Query: 543 AGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
              K D      +L +C+  G  +     I       G        +  ID Y + G +K
Sbjct: 495 RKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLK 554

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            A    +      D +V  TL+ A    G +  A +I     L  L+P +     ++S
Sbjct: 555 KATALVETMPFEPDAMVLKTLLGACRFCGDIELASQI--AKILLELEPEEHCTYVILS 610



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 236/520 (45%), Gaps = 36/520 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H  ++K+G + ++F  + L+ MY+KCG    G  VF  M ERN VSW  +V++  
Sbjct: 112 LGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYS 171

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + G+ DM   +   M+  G   ++  V  ++ +  +    +    +HC  +K  +E    
Sbjct: 172 RVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNT 231

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  + +  Y++   +  AERVF  ++   D+  WN+M+G Y        A  V   M   
Sbjct: 232 VCNATITAYSECCSLQDAERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNF 291

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG--MD 298
           G   D YT+   +  CS+      G+ +HGL+I+  ++ S+ + NALI MYI+ +   M+
Sbjct: 292 GFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCME 351

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A ++F  M  KD  +WN++  G+ +         LF +        +H TFS ++R C 
Sbjct: 352 DALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCS 411

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG Q   LAL  GF     V SSLI+M+ +CG +E A   F+  S  N   WN 
Sbjct: 412 DLATLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNS 471

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ GY  +      L  F  + E  V+++  TF  V+  C            H  +++ G
Sbjct: 472 IIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACS-----------HNGLVEEG 520

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
              C +I S           +++ F      E      +   +      GH  +A  +  
Sbjct: 521 ---CNFIES-----------MESDFGIPPRQEH-----YACAIDLYGRAGHLKKATALVE 561

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++     +PD  +L T+L +C   G  +    I   +++L
Sbjct: 562 TM---PFEPDAMVLKTLLGACRFCGDIELASQIAKILLEL 598



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 189/410 (46%), Gaps = 4/410 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-EMAERN 109
           L+L +N     L  Q+H  IVK G      + N  I  YS+C       RVFD  +  R+
Sbjct: 202 LTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRD 261

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           LV+W  ++ A + + + D+  K+++DM+  GF P+ +    ++  C        G  +H 
Sbjct: 262 LVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHG 321

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGD--VAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
             +K  ++ +  V  ++++ Y +  D  +  A R+F+S+   D   WN+++ GY   G  
Sbjct: 322 LVIKRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLS 381

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +AL +   M    I +D YTF   ++ CS +A   +G+Q H L ++   + +  + ++L
Sbjct: 382 EDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSL 441

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           I MY K   ++ A K FE  +  + I WN++  G++++        LF+       + +H
Sbjct: 442 IFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDH 501

Query: 348 VTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           +TF  +L  C     ++ G   ++ +    G    +   +  I ++ R G ++ A ++ +
Sbjct: 502 ITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVE 561

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            + ++      + L G C  C D ++      I         CT+  + E
Sbjct: 562 TMPFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSE 611



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 37/321 (11%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMY----SKCGYFGWGLRVFDEMAERNLVSWTL 115
           +  G  +HG ++K G  N + + N LI+MY     +C      LR+F  M  ++  +W  
Sbjct: 313 KTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRC--MEDALRIFFSMDLKDCCTWNS 370

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I++  +Q G  +  L++++ M+      + +   +V++ C  +   + G   H  ALK+ 
Sbjct: 371 ILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVG 430

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + N +VG S++  Y+K G +  A + F + S D+   WN++I GYA  G G  AL++  
Sbjct: 431 FDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFY 490

Query: 236 SMLFEGITMDKYTFINALQGC--------------SLVADFDI-GRQIHGLIIRSEVECS 280
            M    + +D  TF+  L  C              S+ +DF I  RQ H         C+
Sbjct: 491 MMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEH-------YACA 543

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
                  ID+Y ++  +  A  + E M  + D +   TL G      +  + AS   K +
Sbjct: 544 -------IDLYGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDI-ELASQIAKIL 595

Query: 340 LSGSRPNHVTFSILLRQCGKL 360
           L      H T+ IL    G+ 
Sbjct: 596 LELEPEEHCTYVILSEMYGRF 616


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 159/586 (27%), Positives = 298/586 (50%), Gaps = 2/586 (0%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  +   ++  Y + G   +A  VF  +   +   W A+I  +A      +A+ + S
Sbjct: 78  LAHNTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFS 137

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           SML  G   D++   +A+  CS + D  +GRQ+H   I+ E    + + NAL+ MY KS 
Sbjct: 138 SMLRSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSG 197

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILL 354
            +   F +FER+ DKD+ISW ++  G ++         +F + I  G   PN   F  + 
Sbjct: 198 SVGDGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVF 257

Query: 355 RQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           R C  +++ L+ G Q+  +++            SL  M+ RC  ++ A  VF  +   ++
Sbjct: 258 RACSVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDL 317

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN L++ +      ++ +  F  + +SG+  +G T   ++  C   +       IH  
Sbjct: 318 VSWNSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSY 377

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K G      + +SL+  Y       ++ +  +     D+ +W ++++A V   H  + 
Sbjct: 378 LVKLGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDV 437

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
             +F  L  +    D   L  +L++ A +G ++  K +H +  K+G   +  +++ +ID 
Sbjct: 438 FKLFSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDT 497

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  A   F+      DV  +++LI+ YA  G   EA+++F +M+   ++P+  T
Sbjct: 498 YAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVT 557

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV V++ACS  GLVD+GC  +  M  +YG+ P+ +   C++D+L+R G L +A   ++ M
Sbjct: 558 FVGVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQM 617

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           PF+P   ++++LL+  R H + ++G+ A+E +L + P + AA+VLL
Sbjct: 618 PFEPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLL 663



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 178/659 (27%), Positives = 300/659 (45%), Gaps = 17/659 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-----FTNDIFLQNNLIAMYSKCGYF 95
           R  P   A  ++    L+S   G  VH H++          ++  L N+LI MY +CG  
Sbjct: 39  RLSPAAYAALVAACSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAP 98

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VFD M +RN VSW  +++A  QN      + ++  M  +G MP++FA+GS +  C
Sbjct: 99  DSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICAC 158

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +G    G  +H  A+K     +  V  +++  Y+K G V     +F  I   D+  W 
Sbjct: 159 SELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWG 218

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVAD-FDIGRQIHGLII 273
           ++I G A  G   +AL +   M+ EG+   +++ F +  + CS+V +  + G QIHG+ +
Sbjct: 219 SIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSV 278

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           + +++ +     +L DMY + + +D A KVF R+   D++SWN+L   FS      +   
Sbjct: 279 KYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMV 338

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF +   SG RP+ +T   LL  C     L  G  +    +  G   +  V++SL+ M+ 
Sbjct: 339 LFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYA 398

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           RC     A  VF     +++ TWN +L+    +    DV K F  +  S   ++  +   
Sbjct: 399 RCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNN 458

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAE 510
           V+         +MV Q+H    K G      + + LI +Y   G LD++   FE   G  
Sbjct: 459 VLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIM-GTG 517

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           R D+ SW +++      G+  EA+ +F  +   G KP+      +L +C+ +G       
Sbjct: 518 R-DVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCY 576

Query: 571 IHPFV-IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +  +  + G        S V+D  A+ G +  A    DQ     D+I++ TL+ A   H
Sbjct: 577 YYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTH 636

Query: 630 GLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             V       +   + N+ PS  A +V + +  +  G  ++   L K M S  G+Q SP
Sbjct: 637 NDVDMGKRAAE--GVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSS-GVQKSP 692



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 145/293 (49%), Gaps = 13/293 (4%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           DS LR D I +   L       +   G  +H ++VKLG   D+ + N+L++MY++C  F 
Sbjct: 345 DSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFS 404

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
             + VF E  +R++V+W  I++A +Q+   +   K++  +  +    +  ++ +V+    
Sbjct: 405 SAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASA 464

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWN 215
            +G  E    +H +A K+ +  +  +   +++ YAK G +  A ++F  + +  DV  W+
Sbjct: 465 ELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWS 524

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL---- 271
           ++I GYA  GY  EAL++ + M   G+  +  TF+  L  CS V   D G   + +    
Sbjct: 525 SLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPE 584

Query: 272 --IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
             I+ +   CS      ++D+  ++  +  A K  ++M  + D+I W TL   
Sbjct: 585 YGIVPTREHCS-----CVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAA 632


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  296 bits (759), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 208/729 (28%), Positives = 370/729 (50%), Gaps = 23/729 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   +S S ++K+   G  +H   +K G   DI L N L+ MY+KCG       ++
Sbjct: 191 DSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLY 250

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +E+  ++ VSW  I+  ++ N   +  L  +  M  +    +  ++   +    S+G   
Sbjct: 251 EEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELS 310

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           FG S+H   +K+  + +  V  S+++ Y++  D+ AAE +F  I+  D+  WNAM+ G+A
Sbjct: 311 FGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFA 370

Query: 223 HCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECS 280
             G   E  +++  M   G    D  T I  L  C+ +     GR IHG  IR + +   
Sbjct: 371 SNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDH 430

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + ++N+LI MY K + ++ A  +F   A+KD +SWN +  G+S N+   +  +LF + + 
Sbjct: 431 VMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLR 490

Query: 341 SGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
            G   +  T   +L  C  L    +  G  + C  L  GFL+   + + L++M+  CG +
Sbjct: 491 WGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDL 550

Query: 399 EMAHSVF-DNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIW--ESGVEVNGCTFFYV 454
             + S+  +N +  +I +WN L+ G C  C    + L+TF N+   E  +  +  T    
Sbjct: 551 TASFSILHENSALADIASWNTLIVG-CVRCDHFREALETF-NLMRQEPPLNYDSITLVSA 608

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAER 511
           +  C   E   +   +HG  +K+   S   + +SLI  Y     ++++   F+F +    
Sbjct: 609 LSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTP-- 666

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ SW  M+SAL H   + EA+ +F +L     +P+E  +  +L++C  IG  +  K +
Sbjct: 667 -NLCSWNCMISALSHNRESREALELFLNL---QFEPNEITIIGVLSACTQIGVLRHGKQV 722

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  V +       ++++A+ID Y+ CG +  A   F  +   ++   +N++I AY +HG 
Sbjct: 723 HAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSES-AWNSMISAYGYHGK 781

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             +A+++F +M  +  + S++TFVS++SACSH GLV++G   ++ M  +YG+QP  +   
Sbjct: 782 GEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECMLERYGVQPETEHQV 841

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
            +VDML R+G L++A    E      S  V+ +LLS C  HG  +LG+  ++ L  L P+
Sbjct: 842 YVVDMLGRSGRLDEA---YEFAKGCDSSGVWGALLSACNYHGELKLGKKIAQYLFQLEPQ 898

Query: 752 NDAAHVLLS 760
           N   ++ LS
Sbjct: 899 NVGHYISLS 907



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 176/686 (25%), Positives = 336/686 (48%), Gaps = 20/686 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V  T  H   +K+G    +    +L+ +YSK G F     +FDE+  R+ ++W  IV+A+
Sbjct: 108 VTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAAS 167

Query: 121 IQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           ++N  + + +  +  M     GF      +  ++   + M   + G +IHC ++K  +  
Sbjct: 168 LENKCYRIAMDFFDKMIKAQTGFDSTTLLL--IVSASLHMKNFDQGRAIHCVSIKSGMLV 225

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +G ++++ YAK GD++++E ++  I   D   WN+++ G  +  +  +AL     M 
Sbjct: 226 DISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMS 285

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
           F   T D  +   A+   S + +   G+ +HGL I+   +  +S+ N+LI +Y +   + 
Sbjct: 286 FSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIK 345

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQC 357
            A  +F  +A KD++SWN +  GF+ N    +   L  +    G  +P+ VT   LL  C
Sbjct: 346 AAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLC 405

Query: 358 GKLLDLDLGLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            +L+    G  +   A+    + D   + +SLI M+ +C  VE A  +F++ + K+  +W
Sbjct: 406 AELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSW 465

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQMVGQ-IHGAI 474
           N ++SGY  N    +    F  +   G   +  T F ++ +C   + N    G+ +H   
Sbjct: 466 NAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQ 525

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEA 533
           +K+GF +   + + L+  Y+N G L  SF   +    L D+ASW  ++   V   H  EA
Sbjct: 526 LKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREA 585

Query: 534 VTIFHSLVEAGEKP---DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           +  F+ + +  E P   D   L + L++CA +  +   KS+H   +K    ++  V +++
Sbjct: 586 LETFNLMRQ--EPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSL 643

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I  Y +C DI  A++ F + F++ ++  +N +I A +H+    EA+E+F  ++    +P+
Sbjct: 644 ITMYDRCRDINSAKVVF-KFFSTPNLCSWNCMISALSHNRESREALELFLNLQ---FEPN 699

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + T + V+SAC+  G++  G  +   +  +  +Q +      L+D+ S  G L+ A  V 
Sbjct: 700 EITIIGVLSACTQIGVLRHGKQVHAHV-FRTCIQDNSFISAALIDLYSNCGRLDTALQVF 758

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKE 736
                + S + + S++S    HG  E
Sbjct: 759 RHAK-EKSESAWNSMISAYGYHGKGE 783



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 158/678 (23%), Positives = 281/678 (41%), Gaps = 64/678 (9%)

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
           AM S C  F   +++FDEM +R            I   E    L  Y+            
Sbjct: 62  AMLSHCHCFCSVIQLFDEMPQR-----------YIHGREIHFELVDYI------------ 98

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
                 K+C+           HC ALKI    +     S+L  Y+K GD  +++ +F  I
Sbjct: 99  ------KLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEI 152

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
            + D   WNA++           A++    M+      D  T +  +     + +FD GR
Sbjct: 153 QNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGR 212

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            IH + I+S +   IS+ NAL+DMY K   +  +  ++E +  KD +SWN++  G   N+
Sbjct: 213 AIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNR 272

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +P +    F +   S    ++V+    +     L +L  G  +  L +  G+    +V +
Sbjct: 273 HPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVAN 332

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VE 445
           SLI ++ +C  ++ A ++F  ++ K+I +WN ++ G+  N    +V      + + G  +
Sbjct: 333 SLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQ 392

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHG-AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
            +  T   ++  C      +    IHG AI +   S    + +SLI  Y     ++ +  
Sbjct: 393 PDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAEL 452

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA--I 562
             N     D  SW AM+S   H  ++ EA  +F  ++  G       +  IL+SC +  I
Sbjct: 453 LFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNI 512

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            +    KS+H + +K GF   + + + ++  Y  CGD+  +     ++    D+  +NTL
Sbjct: 513 NSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTL 572

Query: 623 IMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACSHKGLVDKG----------- 670
           I+         EA+E F+ M+    L     T VS +SAC++  L + G           
Sbjct: 573 IVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSP 632

Query: 671 -----------------CLLFKSMDSQYGMQPSPD--CYGCLVDMLSRNGYLEDAKHVIE 711
                            C    S    +    +P+   + C++  LS N    +A  +  
Sbjct: 633 LGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFL 692

Query: 712 IMPFQPSPTVYRSLLSGC 729
            + F+P+      +LS C
Sbjct: 693 NLQFEPNEITIIGVLSAC 710



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 154/352 (43%), Gaps = 40/352 (11%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D I L  +LS   NL+   LG  +HG  VK    +D  +QN+LI MY +C       
Sbjct: 598 LNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAK 657

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF   +  NL SW  ++SA   N E    L+++++++   F PNE  +  V+  C  +G
Sbjct: 658 VVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQ---FEPNEITIIGVLSACTQIG 714

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +H    +  I+ N F+  ++++ Y+  G +  A +VF          WN+MI 
Sbjct: 715 VLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESAWNSMIS 774

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-----IR 274
            Y + G G +A+ +   M   G  + K TF++ L  CS     + G   +  +     ++
Sbjct: 775 AYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECMLERYGVQ 834

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS----------- 323
            E E  + +V    DM  +S  +D A++ F +  D   + W  L    +           
Sbjct: 835 PETEHQVYVV----DMLGRSGRLDEAYE-FAKGCDSSGV-WGALLSACNYHGELKLGKKI 888

Query: 324 -------ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
                  E +N G   SL + ++ +GS  +       LRQ  +    DLGL+
Sbjct: 889 AQYLFQLEPQNVGHYISLSNMYVAAGSWKDATE----LRQSIQ----DLGLR 932


>gi|302816264|ref|XP_002989811.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
 gi|300142377|gb|EFJ09078.1| hypothetical protein SELMODRAFT_130525 [Selaginella moellendorffii]
          Length = 756

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 197/753 (26%), Positives = 354/753 (47%), Gaps = 72/753 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H V+ G   + F++N LI MY KCG      ++ D M + N+ SWT++++A  Q
Sbjct: 14  GKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSWTIMLAAYAQ 73

Query: 123 NG------EFDMG--------------------------LKMYVDMKTNGFMPNEFAVGS 150
           NG       FD+                            +++  M   GF P+     +
Sbjct: 74  NGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGFQPDRVTFVT 133

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++  C S      G  +H  A+   ++  P V   V+N Y K  D+  A RVF S+   +
Sbjct: 134 LLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARRVFESLKRKN 193

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
              W++++  YA      EA+ +   M  EG+  D+ T I+ L  C  +       QIH 
Sbjct: 194 EISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRASKQSSQIHA 253

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK--DVISWNTLFGGFSENKNP 328
            ++ +++E  + + NAL+ MY K   ++ A  +FE M +K  DVI+WN +   ++   + 
Sbjct: 254 RVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMISAYAHTGHH 313

Query: 329 GQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            +   +F   +L  +  P+  T S +L  C   LDL  G ++ CLA   G     +V  S
Sbjct: 314 TRAFGIFRIMLLEAAVTPSAATISAILAAC---LDLGSGRRIHCLAASIGVESHPSVAIS 370

Query: 388 LIYMFCRCGA-VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           L+ M+ RC + +  A ++F  +  K++  WN +++        A+  + F  +    VE 
Sbjct: 371 LLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFKAM---DVEP 427

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +G TF  ++  CC   +  +  ++H  I     +S   + ++L+  Y   G L ++    
Sbjct: 428 DGFTFASLLAVCC---DLDLGRRLHAGIATARLASRLIVDTALVGMYSRCGSLGDAAAVF 484

Query: 507 NGAE----------------RL---DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
            G E                R+   D  SW +M+SA  H G   +A+  + ++     +P
Sbjct: 485 EGMEDRDTCGSLGDAKLVFDRIPDKDAVSWNSMISAYAHHGRYKDAIATYRAM---DCRP 541

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           DE  + + L + +A+       +IH   ++LG  T   V S +   +AKCG +  A MA 
Sbjct: 542 DEATIVSALAAASALADLDEGAAIHARALELGIATPA-VESTLASMHAKCGSLDAA-MAL 599

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     D++ +N ++ AYA HG  SEA+ +  +M+L  + P+  T   V+++CSH GL+
Sbjct: 600 FEKNREKDLVSWNAMVAAYAQHGDGSEALALIHRMELEGISPNGVTLSGVLASCSHAGLL 659

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           ++G      +  ++G+    + Y  +V++L R G L +A+ V+  MP +P P ++ +L++
Sbjct: 660 ERGMFYVGWLSREHGVAVESEHYRFVVELLGRCGRLGEAEAVVRGMPLEPEPALWVTLVA 719

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C +H      + A+     L P + A++VLL+
Sbjct: 720 ACVLHEEVSRADRAAAG---LDPGDAASYVLLA 749



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/556 (23%), Positives = 238/556 (42%), Gaps = 68/556 (12%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           CV +GA E G  IH  +++  + KN FV   ++N Y K G +  A ++   +   +V  W
Sbjct: 5   CVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSNVFSW 64

Query: 215 NAMIGGYAHCGY---------GFEALNVVS--SML---------------------FEGI 242
             M+  YA  G               +VVS  SML                      EG 
Sbjct: 65  TIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMDLEGF 124

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D+ TF+  L  C+  AD   GRQ+H   + S ++   ++ N +++MY K   ++ A +
Sbjct: 125 QPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLEEARR 184

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE +  K+ ISW++L   +++N    +   LF    L G +P+ VT   +L  CG L  
Sbjct: 185 VFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACGDLRA 244

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNELL 420
                Q+    L      +  V ++L+ M+ + G +E A  +F+ +  K  ++  WN ++
Sbjct: 245 SKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAWNAMI 304

Query: 421 SGYCFNCCDADVLKTF-CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           S Y            F   + E+ V  +  T   ++  C    + +   +IH      G 
Sbjct: 305 SAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGSGR---RIHCLAASIGV 361

Query: 480 SSCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            S   +  SL+  Y      + ++     G ER  + +W  M++A   +G   EA  +F 
Sbjct: 362 ESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWNTMIAACAQRGLAAEAQELFK 421

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK-- 596
           ++     +PD +   ++L  C  +   +R   +H  +      + + V +A++  Y++  
Sbjct: 422 AM---DVEPDGFTFASLLAVCCDLDLGRR---LHAGIATARLASRLIVDTALVGMYSRCG 475

Query: 597 -----------------CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
                            CG +  A++ FD+     D + +N++I AYAHHG   +A+  +
Sbjct: 476 SLGDAAAVFEGMEDRDTCGSLGDAKLVFDR-IPDKDAVSWNSMISAYAHHGRYKDAIATY 534

Query: 640 DKMKLANLQPSQATFV 655
             M   + +P +AT V
Sbjct: 535 RAM---DCRPDEATIV 547



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 198/442 (44%), Gaps = 36/442 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + L   L    +L++    +Q+H  +++     D+ + N L++MY K G      
Sbjct: 225 LKPDRVTLISVLDACGDLRASKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQAT 284

Query: 100 RVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMY-VDMKTNGFMPNEFAVGSVMKVCV 156
            +F+ M E  R++++W  ++SA    G       ++ + +      P+   + +++  C+
Sbjct: 285 VIFETMGEKSRDVIAWNAMISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACL 344

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL-GDVAAAERVFYSISSDDVGCWN 215
            +G+   G  IHC A  I +E +P V  S+L  Y++    + +A  +F  +    +  WN
Sbjct: 345 DLGS---GRRIHCLAASIGVESHPSVAISLLGMYSRCSSSITSARALFLGMERKSLVAWN 401

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI   A  G   EA  +  +M  E    D +TF + L  C    D D+GR++H  I  +
Sbjct: 402 TMIAACAQRGLAAEAQELFKAMDVEP---DGFTFASLLAVC---CDLDLGRRLHAGIATA 455

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFE-------------------RMADKDVISWN 316
            +   + +  AL+ MY +   +  A  VFE                   R+ DKD +SWN
Sbjct: 456 RLASRLIVDTALVGMYSRCGSLGDAAAVFEGMEDRDTCGSLGDAKLVFDRIPDKDAVSWN 515

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           ++   ++ +   G+       +     RP+  T    L     L DLD G  +   AL  
Sbjct: 516 SMISAYAHH---GRYKDAIATYRAMDCRPDEATIVSALAAASALADLDEGAAIHARALEL 572

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G +    V S+L  M  +CG+++ A ++F+    K++ +WN +++ Y  +   ++ L   
Sbjct: 573 G-IATPAVESTLASMHAKCGSLDAAMALFEKNREKDLVSWNAMVAAYAQHGDGSEALALI 631

Query: 437 CNIWESGVEVNGCTFFYVVETC 458
             +   G+  NG T   V+ +C
Sbjct: 632 HRMELEGISPNGVTLSGVLASC 653



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 172/381 (45%), Gaps = 38/381 (9%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L  C +L  L+ G ++   ++ CG      V + LI M+ +CGA+E A  + D +   N
Sbjct: 1   MLDWCVRLGALEAGKRIHRHSVECGMGKNRFVENLLINMYGKCGALEEARKILDGMEDSN 60

Query: 413 ITTWNELLSGYCFNCCDA------------DVLK-----TFCN--------IWE------ 441
           + +W  +L+ Y  N  D+            DV+      + C+         WE      
Sbjct: 61  VFSWTIMLAAYAQNGLDSAKRVFDLSHAKRDVVSWNSMLSTCSQNEQGIQGTWELFQQMD 120

Query: 442 -SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G + +  TF  +++ C    + +   Q+H   + +G      + + ++  Y     L+
Sbjct: 121 LEGFQPDRVTFVTLLDCCASFADLRRGRQVHQCAVASGMDLLPTVANCVVNMYGKCDDLE 180

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +       +R +  SW ++++A        EA+ +F  +   G KPD   L ++L++C 
Sbjct: 181 EARRVFESLKRKNEISWSSLVAAYAQNNQATEAMKLFQHMDLEGLKPDRVTLISVLDACG 240

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVY 619
            + A +++  IH  V++     +V VA+A++  Y K G ++ A + F+     S DVI +
Sbjct: 241 DLRASKQSSQIHARVLEADLERDVVVANALVSMYGKLGRLEQATVIFETMGEKSRDVIAW 300

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           N +I AYAH G  + A  IF  M L A + PS AT  ++++AC   G   +       + 
Sbjct: 301 NAMISAYAHTGHHTRAFGIFRIMLLEAAVTPSAATISAILAACLDLGSGRR----IHCLA 356

Query: 679 SQYGMQPSPDCYGCLVDMLSR 699
           +  G++  P     L+ M SR
Sbjct: 357 ASIGVESHPSVAISLLGMYSR 377


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 207/707 (29%), Positives = 356/707 (50%), Gaps = 19/707 (2%)

Query: 63  GTQVHGHIVK--LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G ++HG   K  LG  + +   N L+ MY+KCG F     VF  M  R+  SW  ++S +
Sbjct: 181 GMELHGMAAKSCLG-AHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGS 239

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-EFGYSIHCFALKIRIEKN 179
           I NG  ++    + +M  + F P+E ++ SV+  C  +     FG S+H  A+K+  E  
Sbjct: 240 IFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDT 299

Query: 180 PFVGCSVLN----FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
               CSV N    FY++ G   AA++VF S  + ++  WNAMI G        EAL V+ 
Sbjct: 300 --ASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLR 357

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKS 294
            M  E    D  T +  + GC+       G  +HG +IR  +     S+ N+L+D+Y+K 
Sbjct: 358 QMRLEN-QPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKC 416

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSIL 353
                A  +F  M  +D+ISWNT+  G+S      + A L  K +LS GS  +  T   +
Sbjct: 417 DEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAV 476

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNV-SYK 411
           +  C    +L  G  L   +L CGF     +  ++LI+M+  CG    A S+ + +    
Sbjct: 477 IPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVS 536

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +I +WN ++ G   N    D L+ F  ++ S  +  +  T   V+  C       +   I
Sbjct: 537 DIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSI 596

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  I+K  F+S   + +SL+  Y  FG   ++          ++ SW  M+S        
Sbjct: 597 HCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKG 656

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             A+  +  + +   +P+E  +  I+ +C  +G Y++ KSIH  V +   +  V++++++
Sbjct: 657 WRALQFYQKMEDF--EPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASL 714

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           +D Y KCG +  A   F+ S   + +  +N+LI A+  HG   +++++F KM  + ++ +
Sbjct: 715 VDMYCKCGRLDIAVRVFEASAEKS-IAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKAT 773

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           ++TF++++SACSH GLVD+G   +  M  ++G+ P+P+ + C+VDML R G L++A   +
Sbjct: 774 KSTFIALLSACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFV 833

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           E +P Q +  ++ +LL+ C      ++GE  ++ LL L P N   +V
Sbjct: 834 ESLPSQQTHGIWGALLNACSSRSELKMGESIAKHLLHLEPGNSGYYV 880



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 233/539 (43%), Gaps = 38/539 (7%)

Query: 167 IHCFALKIRIEKNPFVGCSVL-------NFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +HC ALK     +P V  S+L                 AA  +F    + DV  WNA +G
Sbjct: 76  LHCAALKSGAVLDPPVRTSLLAAYARAGRGAGAGAGAGAALALFREAVAPDVILWNAAVG 135

Query: 220 GY-AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS--E 276
                C Y  +A  +   M  E    D  T +  L G S   +   G ++HG+  +S   
Sbjct: 136 ALTTSCRYD-DAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAAKSCLG 194

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
             C +   NAL+DMY K      A  VF  M  +D  SWN++  G   N     +A  F 
Sbjct: 195 AHC-LGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFR 253

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEE--NVTSSLIYMFC 393
           +   S  +P+ V+ S +L  C +L DL   G  +   A+  G+ D    +V +SL+  + 
Sbjct: 254 EMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYS 313

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFF 452
             G  E A  VF +   +N+ +WN ++ G   N    + L     +  E+  +V   T  
Sbjct: 314 EFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLENQPDV--ATLV 371

Query: 453 YVVETCCRSENQQMVGQ---IHGAIIKTGF----SSCGYICSSLIKSYVNFGQLDNSFEF 505
            +V  C    +Q ++ +   +HG +I+ G      S G   +SL+  Y+   +  N+   
Sbjct: 372 TIVSGC---ADQGLLSEGETLHGYVIRKGLLREEPSMG---NSLLDLYLKCDEPSNAGLL 425

Query: 506 SNGAERLDMASWGAMMSALVHQGH-NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                R D+ SW  M+S     G    EA  +F  L+  G       +  ++ SC+    
Sbjct: 426 FMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEE 485

Query: 565 YQRTKSIHPFVIKLGFNTE-VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
               K++H F +K GF +  V   +A+I  Y  CGD   A    ++    +D+I +NT+I
Sbjct: 486 LSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVI 545

Query: 624 MAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGLVDKG----CLLFKSM 677
           +    + L  +A+EIF  M  +  + P   T VSV+SAC    L+  G    C++ K +
Sbjct: 546 VGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHL 604



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 13/296 (4%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           +CS + +  D I +   LS   +L    LG  +H  I+K  F +++ ++N+L+ MY + G
Sbjct: 565 YCSLA-INPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFG 623

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                  VF  M + NL SW  ++S   QN +    L+ Y  M+   F PNE +V  ++ 
Sbjct: 624 DTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMED--FEPNEISVVGIIC 681

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C  +G    G SIH    +  +  N F+  S+++ Y K G +  A RVF + +   +  
Sbjct: 682 ACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAG 741

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI- 272
           WN++I  +   G+G +++++   M   G+   K TFI  L  CS     D G + + L+ 
Sbjct: 742 WNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLMS 801

Query: 273 ----IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFS 323
               I    E  + IV    DM  ++  +  A K  E +  +     W  L    S
Sbjct: 802 EKFGITPAPEHHVCIV----DMLGRAGRLQEAHKFVESLPSQQTHGIWGALLNACS 853


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 304/579 (52%), Gaps = 10/579 (1%)

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           C  LN   K G +A A  +F  +   +V  W +++ GY   G    AL + + M+  G+ 
Sbjct: 52  CKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVA 111

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + +    AL  C+ +     G Q+H L +R+       I + LI+MY +   +  A +V
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEV 171

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+RM   DV+ + +L   F  N      A    + +  G +PN  T + +L  C ++L  
Sbjct: 172 FDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL-- 229

Query: 364 DLGLQLQCLALHCGFLDEENVTSS--LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             G Q+    +    L  ++V SS  LI  + R G  ++A +VFD++  KN+ +W  ++ 
Sbjct: 230 --GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +    + L+ F ++   GV+ N      V+  C    +  +  Q+H + IK    +
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLIT 344

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y   G ++      N  E  D+ SW   +SA    G   +A+ +   + 
Sbjct: 345 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 404

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G  P+ Y   ++L+SCA + +  +    H   +KLG ++E+   +A+I+ Y+KCG + 
Sbjct: 405 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 464

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR+AFD   +++DV  +N+LI  +A HG  ++A+E+F KM+   ++P  +TF+ V+  C
Sbjct: 465 SARLAFD-VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +H G+V++G L F+ M  QY   P+P  Y C++DML RNG  ++A  +I  MPF+P   +
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 583

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +++LL+ C++H N ++G+ A+++L+ L  ++ A++VL+S
Sbjct: 584 WKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 622



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 254/560 (45%), Gaps = 16/560 (2%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           + D+ L+   +    K G     L +FD M  +N+V+WT ++S   +NG  +  L M+ D
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M  +G  PN+FA  + +  C  +GA   G  +H  A++     + ++G  ++  Y++ G 
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGS 164

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + AA+ VF  + S DV  + ++I  +   G    A   +  ML +G+  +++T    L  
Sbjct: 165 LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVN--ALIDMYIKSSGMDYAFKVFERMADKDVI 313
           C  V    +G+QIHG +I+     S S+ +  ALID Y ++     A  VF+ +  K+V+
Sbjct: 225 CPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVV 280

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW ++   +  +    +   +F   I  G  PN    SI+L  CG    + LG QL C A
Sbjct: 281 SWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS---IGLGRQLHCSA 337

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +    + +  V+++L+ M+ R G VE   ++ + +   ++ +W   +S    N      +
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS--SLIK 491
              C +   G   NG  F  V+ +C    +     Q H   +K G  S   IC+  +LI 
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDS--EICTGNALIN 455

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   GQ+ ++    +     D+ SW +++      G  ++A+ +F  +   G KPD+  
Sbjct: 456 MYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDST 515

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQ 609
              +L  C   G  +  +     +I +  F       + +ID   + G    A RM  D 
Sbjct: 516 FLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDM 575

Query: 610 SFNSNDVIVYNTLIMAYAHH 629
            F   D +++ TL+ +   H
Sbjct: 576 PFEP-DALIWKTLLASCKLH 594



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 7/400 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + LI MYS+CG       VFD M   ++V +T ++SA  +
Sbjct: 133 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKNPF 181
           NGEF++  +  + M   G  PNE  + +++  C   +G    GY I    L+    ++ +
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLR---SQSVY 249

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ G+   A+ VF S+   +V  W +M+  Y   G   EAL V   M+ EG
Sbjct: 250 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +++     L  C  +    +GRQ+H   I+ ++   I + NAL+ MY ++  ++   
Sbjct: 310 VDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 366

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +  ++ + D++SW T      +N    +  +L  +    G  PN   FS +L  C  + 
Sbjct: 367 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 426

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G+Q  CLAL  G   E    ++LI M+ +CG +  A   FD +   ++T+WN L+ 
Sbjct: 427 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 486

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           G+  +      L+ F  +  +G++ +  TF  V+  C  S
Sbjct: 487 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHS 526



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 60  RVLGTQVHGHIVK-LGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           RVLG Q+HG+++K +G  +  ++    LI  YS+ G F     VFD +  +N+VSW  ++
Sbjct: 227 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 286

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
              I++G  +  L+++ DM + G  PNEFA+  V+  C S+G    G  +HC A+K  + 
Sbjct: 287 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLI 343

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V  ++L+ Y + G V   E +   I + D+  W   I      G+G +A+ ++  M
Sbjct: 344 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 403

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG T + Y F + L  C+ VA  D G Q H L ++   +  I   NALI+MY K   M
Sbjct: 404 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A   F+ M   DV SWN+L  G +++ +  +   +F K   +G +P+  TF  +L  C
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523

Query: 358 GKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITT 415
                ++ G L  + +     F    +  + +I M  R G  + A  + +++ ++ +   
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 583

Query: 416 WNELLS 421
           W  LL+
Sbjct: 584 WKTLLA 589



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G       + +++   +LVSWT  +SA  
Sbjct: 329 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + +   M + GF PN +A  SV+  C  + + + G   HC ALK+  +    
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G+A  G   +AL V S M   G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYA 300
           I  D  TF+  L GC+     + G     L+I +     + S    +IDM  ++   D A
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++   M  + D + W TL      ++N
Sbjct: 569 LRMINDMPFEPDALIWKTLLASCKLHRN 596



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   ++ S   G Q H   +KLG  ++I   N LI MYSKCG  G     FD M   ++
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW  ++    Q+G+ +  L+++  M++NG  P++     V+  C   G  E G      
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE----L 534

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             ++ I++  F      + YA                     C   M+G     G   EA
Sbjct: 535 FFRLMIDQYSFT--PAPSHYA---------------------CMIDMLG---RNGRFDEA 568

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +++ M FE    D   +   L  C L  + DIG+     ++      S S V  + ++
Sbjct: 569 LRMINDMPFEP---DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYV-LMSNI 624

Query: 291 YIKSSGMDYAFKVFERMADKDV 312
           Y      + A KV  RM +  V
Sbjct: 625 YAMHGEWEDARKVRRRMDETGV 646


>gi|293337115|ref|NP_001168043.1| uncharacterized protein LOC100381772 precursor [Zea mays]
 gi|223945665|gb|ACN26916.1| unknown [Zea mays]
 gi|224028321|gb|ACN33236.1| unknown [Zea mays]
          Length = 780

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 341/680 (50%), Gaps = 15/680 (2%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGL 130
           K G + D ++ + ++ + +K G  G  LR F++   R ++V W   +S A++NGE  +G+
Sbjct: 63  KDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGV 122

Query: 131 KMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           +M++DM + +   PN F    V+  C +      G ++H   L+   E + FVG S++N 
Sbjct: 123 EMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNM 182

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G + AA   F+ +   +V  W   I G+        A+ +++ ML  G+ ++KYT 
Sbjct: 183 YVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTA 242

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L  CS  +      Q+HG+II+SE+     +  ALI  Y  +  +    KVF+ +  
Sbjct: 243 TSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEV-- 300

Query: 310 KDVIS----WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            D +S    W+    G S + +  ++  L  + +    RPN   ++ +      +   +L
Sbjct: 301 -DTVSNRSIWSAFISGVSRH-SVQRSIQLLRRMLFQCLRPNDKCYASVF---SSVDSSEL 355

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G QL  L +  GF+    V S+L  M+ RC  ++ ++ VF+ +  ++  +W  +++G+  
Sbjct: 356 GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFAT 415

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           +    +  +   N+   G   N  +   ++  C   E      ++HG +++  +     I
Sbjct: 416 HGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSI 474

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
              L+  Y     L  + +  +     D     +M+S     G++ EA+++F  ++ AG 
Sbjct: 475 NHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGF 534

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
             D ++  +I++ CA +      K +H +  K+G  +++ V+S+++  Y+K G++  +R 
Sbjct: 535 HIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRK 594

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+  +  D++ +  +I  YA HG   +A+ +FD M    ++P     VSV+SAC   G
Sbjct: 595 VFDE-LDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNG 653

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV++G   F SM + YG++P    Y C+VD+L R+G L +AK  IE MP +P+  V+ +L
Sbjct: 654 LVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTL 713

Query: 726 LSGCRIHGNKELGEWASEKL 745
           L+ CR+H +  LG +   K+
Sbjct: 714 LAACRVHDDVVLGRFVENKI 733



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 259/570 (45%), Gaps = 7/570 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG +++     D+F+  +++ MY KCG  G  +  F  M  RN+VSWT  ++  +
Sbjct: 156 VGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFV 215

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q  +    + +  +M  +G   N++   S++  C           +H   +K  +  +  
Sbjct: 216 QQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV 275

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  ++++ YA  G V   E+VF  + +  +   W+A I G +       ++ ++  MLF+
Sbjct: 276 VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQ-RSIQLLRRMLFQ 334

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  +   + +     S V   ++GRQ+H L+I+      + + +AL  MY + + +  +
Sbjct: 335 CLRPNDKCYASVF---SSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDS 391

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +KVFE M ++D +SW ++  GF+ + +  +   +    I  G  PN V+ S +L  C   
Sbjct: 392 YKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIP 451

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++    L   +    ++   L+ M+ +C  ++ A  +FD    K+    + ++
Sbjct: 452 ECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMI 510

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N    + L  F  +  +G  ++      ++  C           +HG   K G  
Sbjct: 511 SGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGIL 570

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + SSL+K Y   G LD+S +  +  +  D+ +W A++      G + +A+ +F  +
Sbjct: 571 SDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLM 630

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  G KPD  IL ++L++C   G  +   K  +      G    ++    ++D   + G 
Sbjct: 631 IRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGR 690

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +  A+   +      + +V++TL+ A   H
Sbjct: 691 LVEAKSFIESMPVKPNSMVWSTLLAACRVH 720



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/580 (23%), Positives = 262/580 (45%), Gaps = 17/580 (2%)

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGY 221
           F   ++C A K  + ++ ++  ++++  AK G +  A R F        V CWN  I G 
Sbjct: 53  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 112

Query: 222 AHCGYGFEALNVVSSMLFEGITMDK--YTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
              G     + +   M+  G T +   +T+   L  C+   +  +GR +HG+++R + E 
Sbjct: 113 VRNGEHALGVEMFLDMV-RGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEY 171

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  ++++MY+K   M  A   F RM  ++V+SW T   GF + ++P     L  + +
Sbjct: 172 DVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEML 231

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG   N  T + +L  C +   +    Q+  + +      +  V  +LI  +   GAV+
Sbjct: 232 RSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQ 291

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC--TFFYVVE 456
           +   VF  V +  N + W+  +SG   +     +      +++     + C  + F  V+
Sbjct: 292 LCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVD 351

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +       ++  Q+H  +IK GF     + S+L   Y     L +S++     +  D  S
Sbjct: 352 S------SELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS 405

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M++     GH+ EA  +  +++  G  P++  L  IL++C       + K +H  V+
Sbjct: 406 WTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVL 465

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  +     +   ++  Y+KC D++ AR  FD +    D I+ +++I  YA +G   EA+
Sbjct: 466 R-AYGRTTSINHCLVSMYSKCKDLQTARKLFDAT-PCKDQIMLSSMISGYATNGYSEEAL 523

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M  A     +    S++S C++      G LL     S+ G+         LV +
Sbjct: 524 SLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLL-HGYASKVGILSDLSVSSSLVKL 582

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            S++G L+D++ V + +   P    + +++ G   HG+ +
Sbjct: 583 YSKSGNLDDSRKVFDELDV-PDLVTWTAIIDGYAQHGSSQ 621



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S  LG Q+H  ++K GF + + + + L  MYS+C       +VF+EM E++ V
Sbjct: 345 SVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 404

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +++    +G      ++  +M   GF PN+ ++ +++  C        G  +H   
Sbjct: 405 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 464

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L+          C +++ Y+K  D+  A ++F +    D    ++MI GYA  GY  EAL
Sbjct: 465 LRAYGRTTSINHC-LVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEAL 523

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   ML  G  +D++   + +  C+ +A    G+ +HG   +  +   +S+ ++L+ +Y
Sbjct: 524 SLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLY 583

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            KS  +D + KVF+ +   D+++W  +  G++++ +     +LF   I  G +P+ V   
Sbjct: 584 SKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILV 643

Query: 352 ILLRQCGK 359
            +L  CG+
Sbjct: 644 SVLSACGR 651



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 16/293 (5%)

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQ 527
           Q++ A  K G S   YICS+++      G+L ++   F +G  R  +  W   +S  V  
Sbjct: 56  QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 115

Query: 528 GHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
           G +   V +F  +V     +P+ +    +L++CAA       +++H  V++     +V+V
Sbjct: 116 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 175

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +++++ Y KCG + GA M         +V+ + T I  +        AM +  +M  + 
Sbjct: 176 GTSIVNMYVKCGQM-GAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSG 234

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY------GCLVDMLSRN 700
           +  ++ T  S++ ACS   ++       +  +  +GM    + Y        L+   +  
Sbjct: 235 VAINKYTATSILLACSQTSMI-------REANQVHGMIIKSELYLDHVVKEALISTYANA 287

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           G ++  + V + +    + +++ + +SG   H  +   +     L   L  ND
Sbjct: 288 GAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPND 340



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    +  +S+  N+     G  +HG+  K+G  +D+ + ++L+ +YSK G      +VF
Sbjct: 537 DRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVF 596

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DE+   +LV+WT I+    Q+G     L ++  M   G  P+   + SV+  C   G  E
Sbjct: 597 DELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVE 656

Query: 163 FGY 165
            G+
Sbjct: 657 EGF 659


>gi|414885414|tpg|DAA61428.1| TPA: hypothetical protein ZEAMMB73_429908 [Zea mays]
          Length = 817

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 182/680 (26%), Positives = 341/680 (50%), Gaps = 15/680 (2%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGL 130
           K G + D ++ + ++ + +K G  G  LR F++   R ++V W   +S A++NGE  +G+
Sbjct: 100 KDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRNGEHALGV 159

Query: 131 KMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           +M++DM + +   PN F    V+  C +      G ++H   L+   E + FVG S++N 
Sbjct: 160 EMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFVGTSIVNM 219

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G + AA   F+ +   +V  W   I G+        A+ +++ ML  G+ ++KYT 
Sbjct: 220 YVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSGVAINKYTA 279

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L  CS  +      Q+HG+II+SE+     +  ALI  Y  +  +    KVF+ +  
Sbjct: 280 TSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQLCEKVFQEV-- 337

Query: 310 KDVIS----WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            D +S    W+    G S + +  ++  L  + +    RPN   ++ +      +   +L
Sbjct: 338 -DTVSNRSIWSAFISGVSRH-SVQRSIQLLRRMLFQCLRPNDKCYASVF---SSVDSSEL 392

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G QL  L +  GF+    V S+L  M+ RC  ++ ++ VF+ +  ++  +W  +++G+  
Sbjct: 393 GRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVSWTSMIAGFAT 452

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           +    +  +   N+   G   N  +   ++  C   E      ++HG +++  +     I
Sbjct: 453 HGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVLR-AYGRTTSI 511

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
              L+  Y     L  + +  +     D     +M+S     G++ EA+++F  ++ AG 
Sbjct: 512 NHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEALSLFQLMLAAGF 571

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
             D ++  +I++ CA +      K +H +  K+G  +++ V+S+++  Y+K G++  +R 
Sbjct: 572 HIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRK 631

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+  +  D++ +  +I  YA HG   +A+ +FD M    ++P     VSV+SAC   G
Sbjct: 632 VFDE-LDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNG 690

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV++G   F SM + YG++P    Y C+VD+L R+G L +AK  IE MP +P+  V+ +L
Sbjct: 691 LVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGRLVEAKSFIESMPVKPNSMVWSTL 750

Query: 726 LSGCRIHGNKELGEWASEKL 745
           L+ CR+H +  LG +   K+
Sbjct: 751 LAACRVHDDVVLGRFVENKI 770



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 130/570 (22%), Positives = 259/570 (45%), Gaps = 7/570 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG +++     D+F+  +++ MY KCG  G  +  F  M  RN+VSWT  ++  +
Sbjct: 193 VGRAVHGMVLRRDSEYDVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFV 252

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q  +    + +  +M  +G   N++   S++  C           +H   +K  +  +  
Sbjct: 253 QQEDPVNAMLLLTEMLRSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHV 312

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  ++++ YA  G V   E+VF  + +  +   W+A I G +       ++ ++  MLF+
Sbjct: 313 VKEALISTYANAGAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQ-RSIQLLRRMLFQ 371

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  +   + +     S V   ++GRQ+H L+I+      + + +AL  MY + + +  +
Sbjct: 372 CLRPNDKCYASVF---SSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDS 428

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +KVFE M ++D +SW ++  GF+ + +  +   +    I  G  PN V+ S +L  C   
Sbjct: 429 YKVFEEMQEQDEVSWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIP 488

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++    L   +    ++   L+ M+ +C  ++ A  +FD    K+    + ++
Sbjct: 489 ECLLKGKEVHGHVLR-AYGRTTSINHCLVSMYSKCKDLQTARKLFDATPCKDQIMLSSMI 547

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N    + L  F  +  +G  ++      ++  C           +HG   K G  
Sbjct: 548 SGYATNGYSEEALSLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGIL 607

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + SSL+K Y   G LD+S +  +  +  D+ +W A++      G + +A+ +F  +
Sbjct: 608 SDLSVSSSLVKLYSKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLM 667

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  G KPD  IL ++L++C   G  +   K  +      G    ++    ++D   + G 
Sbjct: 668 IRCGVKPDTVILVSVLSACGRNGLVEEGFKHFNSMRTVYGVEPVLHHYCCMVDLLGRSGR 727

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +  A+   +      + +V++TL+ A   H
Sbjct: 728 LVEAKSFIESMPVKPNSMVWSTLLAACRVH 757



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/580 (23%), Positives = 262/580 (45%), Gaps = 17/580 (2%)

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGY 221
           F   ++C A K  + ++ ++  ++++  AK G +  A R F        V CWN  I G 
Sbjct: 90  FAEQLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGA 149

Query: 222 AHCGYGFEALNVVSSMLFEGITMDK--YTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
              G     + +   M+  G T +   +T+   L  C+   +  +GR +HG+++R + E 
Sbjct: 150 VRNGEHALGVEMFLDMV-RGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEY 208

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  ++++MY+K   M  A   F RM  ++V+SW T   GF + ++P     L  + +
Sbjct: 209 DVFVGTSIVNMYVKCGQMGAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEML 268

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            SG   N  T + +L  C +   +    Q+  + +      +  V  +LI  +   GAV+
Sbjct: 269 RSGVAINKYTATSILLACSQTSMIREANQVHGMIIKSELYLDHVVKEALISTYANAGAVQ 328

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC--TFFYVVE 456
           +   VF  V +  N + W+  +SG   +     +      +++     + C  + F  V+
Sbjct: 329 LCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPNDKCYASVFSSVD 388

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +       ++  Q+H  +IK GF     + S+L   Y     L +S++     +  D  S
Sbjct: 389 S------SELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEVS 442

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M++     GH+ EA  +  +++  G  P++  L  IL++C       + K +H  V+
Sbjct: 443 WTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHVL 502

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           +  +     +   ++  Y+KC D++ AR  FD +    D I+ +++I  YA +G   EA+
Sbjct: 503 R-AYGRTTSINHCLVSMYSKCKDLQTARKLFDAT-PCKDQIMLSSMISGYATNGYSEEAL 560

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M  A     +    S++S C++      G LL     S+ G+         LV +
Sbjct: 561 SLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLL-HGYASKVGILSDLSVSSSLVKL 619

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            S++G L+D++ V + +   P    + +++ G   HG+ +
Sbjct: 620 YSKSGNLDDSRKVFDELDV-PDLVTWTAIIDGYAQHGSSQ 658



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 157/308 (50%), Gaps = 1/308 (0%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+  ++ S  LG Q+H  ++K GF + + + + L  MYS+C       +VF+EM E++ V
Sbjct: 382 SVFSSVDSSELGRQLHPLVIKDGFIHVVLVASALSTMYSRCNDLKDSYKVFEEMQEQDEV 441

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT +++    +G      ++  +M   GF PN+ ++ +++  C        G  +H   
Sbjct: 442 SWTSMIAGFATHGHSVEAFQVLRNMIAEGFTPNDVSLSAILSACNIPECLLKGKEVHGHV 501

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           L+          C +++ Y+K  D+  A ++F +    D    ++MI GYA  GY  EAL
Sbjct: 502 LRAYGRTTSINHC-LVSMYSKCKDLQTARKLFDATPCKDQIMLSSMISGYATNGYSEEAL 560

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   ML  G  +D++   + +  C+ +A    G+ +HG   +  +   +S+ ++L+ +Y
Sbjct: 561 SLFQLMLAAGFHIDRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLY 620

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            KS  +D + KVF+ +   D+++W  +  G++++ +     +LF   I  G +P+ V   
Sbjct: 621 SKSGNLDDSRKVFDELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILV 680

Query: 352 ILLRQCGK 359
            +L  CG+
Sbjct: 681 SVLSACGR 688



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/293 (20%), Positives = 127/293 (43%), Gaps = 16/293 (5%)

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQ 527
           Q++ A  K G S   YICS+++      G+L ++   F +G  R  +  W   +S  V  
Sbjct: 93  QLYCAAWKDGLSRDAYICSTMVDLLAKHGRLGDALRAFEDGEYRGSVVCWNTAISGAVRN 152

Query: 528 GHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
           G +   V +F  +V     +P+ +    +L++CAA       +++H  V++     +V+V
Sbjct: 153 GEHALGVEMFLDMVRGSTCEPNSFTYSGVLSACAAGEELGVGRAVHGMVLRRDSEYDVFV 212

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +++++ Y KCG + GA M         +V+ + T I  +        AM +  +M  + 
Sbjct: 213 GTSIVNMYVKCGQM-GAAMNEFWRMPIRNVVSWTTAIAGFVQQEDPVNAMLLLTEMLRSG 271

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY------GCLVDMLSRN 700
           +  ++ T  S++ ACS   ++       +  +  +GM    + Y        L+   +  
Sbjct: 272 VAINKYTATSILLACSQTSMI-------REANQVHGMIIKSELYLDHVVKEALISTYANA 324

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           G ++  + V + +    + +++ + +SG   H  +   +     L   L  ND
Sbjct: 325 GAVQLCEKVFQEVDTVSNRSIWSAFISGVSRHSVQRSIQLLRRMLFQCLRPND 377



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 61/123 (49%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    +  +S+  N+     G  +HG+  K+G  +D+ + ++L+ +YSK G      +VF
Sbjct: 574 DRFLCSSIISICANMARPFCGKLLHGYASKVGILSDLSVSSSLVKLYSKSGNLDDSRKVF 633

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DE+   +LV+WT I+    Q+G     L ++  M   G  P+   + SV+  C   G  E
Sbjct: 634 DELDVPDLVTWTAIIDGYAQHGSSQDALALFDLMIRCGVKPDTVILVSVLSACGRNGLVE 693

Query: 163 FGY 165
            G+
Sbjct: 694 EGF 696


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 294/578 (50%), Gaps = 2/578 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+   + G++  A RVF  +   DV  WN M+GGY   G+  EAL++   ML+ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D YTF   L+ C  + D+ +GR++H  ++R      + ++NAL+ MY K   +  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF+ MA  D ISWN +  G  EN        LF   + +  +PN +T + +    G L 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           ++    ++   A+  GF  +    +SLI M+   G +  A  +F  +  K+  +W  ++S
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N      L+ +  +    V  +  T    +  C       +  ++H      GF  
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L++ Y     +D + E        D+ SW +M++       + EA+  F  ++
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KP+       L++CAA GA +  K IH +V++ G  +E YV +A++D Y KCG   
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F    +  DV+ +N ++  +  HGL   A+ +F++M      P + TFV+++ AC
Sbjct: 552 YAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S  G+V +G  LF  M  ++ + P+   Y C+VD+LSR G L +A ++I  MP +P   V
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + +LL+GCRIH + ELGE A++ +L L P + A HVLL
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLL 708



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/545 (25%), Positives = 258/545 (47%), Gaps = 4/545 (0%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L N +++M  + G      RVF +M ER++ SW ++V    + G  +  L +Y  M   G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+ +    V++ C  +     G  +H   L+        V  +++  YAK GD+ AA 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF  ++  D   WNAMI G+         L +  +ML   +  +  T  +      +++
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           +    +++HG  ++      ++  N+LI MY     M  A K+F RM  KD +SW  +  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +N  P +   ++    L    P+ VT +  L  C  L  LD+G++L  LA + GF+ 
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V ++L+ M+ +   ++ A  VF  ++ K++ +W+ +++G+CFN    + L  F  + 
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
              V+ N  TF   +  C  +   +   +IH  +++ G  S GY+ ++L+  YV  GQ  
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 501 NSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            ++ +FS  +E+ D+ SW  M+S  V  G    A+++F+ +VE GE PDE     +L +C
Sbjct: 552 YAWAQFSVHSEK-DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 560 AAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           +  G   Q  +  H    K      +   + ++D  ++ G +  A    ++     D  V
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 619 YNTLI 623
           +  L+
Sbjct: 671 WGALL 675



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 228/466 (48%), Gaps = 9/466 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VH H+++ GF +++ + N L+ MY+KCG      +VFD MA  + +SW  +++   
Sbjct: 215 MGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHF 274

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N E + GL++++ M  N   PN   + SV      +    F   +H FA+K     +  
Sbjct: 275 ENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVA 334

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              S++  Y  LG +  A ++F  + + D   W AMI GY   G+  +AL V + M    
Sbjct: 335 FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHN 394

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D  T  +AL  C+ +   D+G ++H L         + + NAL++MY KS  +D A 
Sbjct: 395 VSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ MA+KDV+SW+++  GF  N    +    F +++L   +PN VTF   L  C    
Sbjct: 455 EVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYF-RYMLGHVKPNSVTFIAALSACAATG 513

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    L CG   E  V ++L+ ++ +CG    A + F   S K++ +WN +LS
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+  +      L  F  + E G   +  TF  ++  C R+    + G     ++   FS 
Sbjct: 574 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRA-GMVIQGWELFHMMTEKFSI 632

Query: 482 CG----YICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMS 522
                 Y C   + S V  G+L  ++   N    + D A WGA+++
Sbjct: 633 VPNLKHYACMVDLLSRV--GKLTEAYNLINRMPIKPDAAVWGALLN 676



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 14/381 (3%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S++++  + S V    ++HG  VK GF  D+   N+LI MY+  G  G   ++F  M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + +SWT ++S   +NG  D  L++Y  M+ +   P++  + S +  C  +G  + G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLH 422

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A      +   V  ++L  YAK   +  A  VF  ++  DV  W++MI G+      F
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL     ML   +  +  TFI AL  C+       G++IH  ++R  +     + NAL+
Sbjct: 483 EALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALL 541

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           D+Y+K     YA+  F   ++KDV+SWN +  GF  +       SLF++ +  G  P+ V
Sbjct: 542 DLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEV 601

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAH 402
           TF  LL  C +      G+ +Q   L     ++ ++  +L +  C      R G +  A+
Sbjct: 602 TFVALLCACSR-----AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656

Query: 403 SVFDNVSYK-NITTWNELLSG 422
           ++ + +  K +   W  LL+G
Sbjct: 657 NLINRMPIKPDAAVWGALLNG 677



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 5/295 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++H      GF   + + N L+ MY+K  +    + VF  MAE+++VSW+ +++   
Sbjct: 417 VGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC 476

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N      L  Y         PN     + +  C + GA   G  IH + L+  I    +
Sbjct: 477 FNHRSFEAL-YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y K G  + A   F   S  DV  WN M+ G+   G G  AL++ + M+  G
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 595

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D+ TF+  L  CS       G ++ H +  +  +  ++     ++D+  +   +  A
Sbjct: 596 EHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655

Query: 301 FKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           + +  RM  K D   W  L  G   +++  +   L  K IL    PN V + +LL
Sbjct: 656 YNLINRMPIKPDAAVWGALLNGCRIHRHV-ELGELAAKVILE-LEPNDVAYHVLL 708


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 168/579 (29%), Positives = 304/579 (52%), Gaps = 10/579 (1%)

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           C  LN   K G +A A  +F  +   +V  W +++ GY   G    AL + + M+  G+ 
Sbjct: 52  CKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVA 111

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + +    AL  C+ +     G Q+H L +R+       I + LI+MY +   +  A +V
Sbjct: 112 PNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEV 171

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+RM   DV+ + +L   F  N      A    + +  G +PN  T + +L  C ++L  
Sbjct: 172 FDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL-- 229

Query: 364 DLGLQLQCLALHCGFLDEENVTSS--LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             G Q+    +    L  ++V SS  LI  + R G  ++A +VFD++  KN+ +W  ++ 
Sbjct: 230 --GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQ 287

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +    + L+ F ++   GV+ N      V+  C    +  +  Q+H + IK    +
Sbjct: 288 LYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLIT 344

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y   G ++      N  E  D+ SW   +SA    G   +A+ +   + 
Sbjct: 345 DIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMH 404

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             G  P+ Y   ++L+SCA + +  +    H   +KLG ++E+   +A+I+ Y+KCG + 
Sbjct: 405 SEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMG 464

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR+AFD   +++DV  +N+LI  +A HG  ++A+E+F KM+   ++P  +TF+ V+  C
Sbjct: 465 SARLAFD-VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 523

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           +H G+V++G L F+ M  QY   P+P  Y C++DML RNG  ++A  +I  MPF+P   +
Sbjct: 524 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 583

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +++LL+ C++H N ++G+ A+++L+ L  ++ A++VL+S
Sbjct: 584 WKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 622



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 252/558 (45%), Gaps = 12/558 (2%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           + D+ L+   +    K G     L +FD M  +N+V+WT ++S   +NG  +  L M+ D
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M  +G  PN+FA  + +  C  +GA   G  +H  A++     + ++G  ++  Y++ G 
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGS 164

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + AA+ VF  + S DV  + ++I  +   G    A   +  ML +G+  +++T    L  
Sbjct: 165 LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVN--ALIDMYIKSSGMDYAFKVFERMADKDVI 313
           C  V    +G+QIHG +I+     S S+ +  ALID Y ++     A  VF+ +  K+V+
Sbjct: 225 CPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVV 280

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW ++   +  +    +   +F   I  G  PN    SI+L  CG    + LG QL C A
Sbjct: 281 SWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGS---IGLGRQLHCSA 337

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +    + +  V+++L+ M+ R G VE   ++ + +   ++ +W   +S    N      +
Sbjct: 338 IKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
              C +   G   NG  F  V+ +C    +     Q H   +K G  S     ++LI  Y
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              GQ+ ++    +     D+ SW +++      G  ++A+ +F  +   G KPD+    
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517

Query: 554 TILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSF 611
            +L  C   G  +  +     +I +  F       + +ID   + G    A RM  D  F
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPF 577

Query: 612 NSNDVIVYNTLIMAYAHH 629
              D +++ TL+ +   H
Sbjct: 578 EP-DALIWKTLLASCKLH 594



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 7/400 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + LI MYS+CG       VFD M   ++V +T ++SA  +
Sbjct: 133 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKNPF 181
           NGEF++  +  + M   G  PNE  + +++  C   +G    GY I    L+    ++ +
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLR---SQSVY 249

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ G+   A+ VF S+   +V  W +M+  Y   G   EAL V   M+ EG
Sbjct: 250 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 309

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +++     L  C  +    +GRQ+H   I+ ++   I + NAL+ MY ++  ++   
Sbjct: 310 VDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 366

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +  ++ + D++SW T      +N    +  +L  +    G  PN   FS +L  C  + 
Sbjct: 367 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 426

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G+Q  CLAL  G   E    ++LI M+ +CG +  A   FD +   ++T+WN L+ 
Sbjct: 427 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 486

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           G+  +      L+ F  +  +G++ +  TF  V+  C  S
Sbjct: 487 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHS 526



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 183/367 (49%), Gaps = 7/367 (1%)

Query: 59  SRVLGTQVHGHIVK-LGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
            RVLG Q+HG+++K +G  +  ++    LI  YS+ G F     VFD +  +N+VSW  +
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +   I++G  +  L+++ DM + G  PNEFA+  V+  C S+G    G  +HC A+K  +
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDL 342

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  V  ++L+ Y + G V   E +   I + D+  W   I      G+G +A+ ++  
Sbjct: 343 ITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQ 402

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG T + Y F + L  C+ VA  D G Q H L ++   +  I   NALI+MY K   
Sbjct: 403 MHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQ 462

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  A   F+ M   DV SWN+L  G +++ +  +   +F K   +G +P+  TF  +L  
Sbjct: 463 MGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMG 522

Query: 357 CGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
           C     ++ G L  + +     F    +  + +I M  R G  + A  + +++ ++ +  
Sbjct: 523 CNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDAL 582

Query: 415 TWNELLS 421
            W  LL+
Sbjct: 583 IWKTLLA 589



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G       + +++   +LVSWT  +SA  
Sbjct: 329 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 388

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + +   M + GF PN +A  SV+  C  + + + G   HC ALK+  +    
Sbjct: 389 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 448

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G+A  G   +AL V S M   G
Sbjct: 449 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 508

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYA 300
           I  D  TF+  L GC+     + G     L+I +     + S    +IDM  ++   D A
Sbjct: 509 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 568

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++   M  + D + W TL      ++N
Sbjct: 569 LRMINDMPFEPDALIWKTLLASCKLHRN 596



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 104/262 (39%), Gaps = 34/262 (12%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   ++ S   G Q H   +KLG  ++I   N LI MYSKCG  G     FD M   ++
Sbjct: 419 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 478

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW  ++    Q+G+ +  L+++  M++NG  P++     V+  C   G  E G      
Sbjct: 479 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEG------ 532

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            L  R+  + +      + YA                         MI      G   EA
Sbjct: 533 ELFFRLMIDQYSFTPAPSHYA------------------------CMIDMLGRNGRFDEA 568

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +++ M FE    D   +   L  C L  + DIG+     ++      S S V  + ++
Sbjct: 569 LRMINDMPFEP---DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYV-LMSNI 624

Query: 291 YIKSSGMDYAFKVFERMADKDV 312
           Y      + A KV  RM +  V
Sbjct: 625 YAMHGEWEDARKVRRRMDETGV 646


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 175/583 (30%), Positives = 305/583 (52%), Gaps = 11/583 (1%)

Query: 186 VLNFYAKLGDVAAAERVFYSIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           +++ Y    ++  A  VF  +     +V  WN +I  YA  G   EA+++   ML  GIT
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            +++TF   L+ CS + +   GR+IH  I R  +E ++ +  AL+D Y K   +D A +V
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F++M  +DV++WN++  GFS ++      +     + +   PN  T   +L    ++  L
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSL 236

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSG 422
             G ++    +  GF+ +  V + ++ ++ +C  ++ A  +FD +   KN  TW+ ++  
Sbjct: 237 RHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296

Query: 423 YCFNCCD--ADVLKTFCNIW---ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           Y    CD   + L+ FC +    +  + ++  T   V+  C    +      +H   IK+
Sbjct: 297 YVV--CDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS 354

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           GF     + ++L+  Y   G ++ +  F N  +  D  S+ A++S  V  G++ E + +F
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +  +G  P++  L ++L +CA +         H + I  GF  +  + +A+ID YAKC
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G I  AR  FD+  +   ++ +NT+I+AY  HG+  EA+ +FD M+   L+P   TF+ +
Sbjct: 475 GKIDTARKVFDR-MHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICL 533

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH GLV +G   F +M   +G+ P  + Y C+VD+LSR G  ++    IE MP +P
Sbjct: 534 ISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEP 593

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              V+ +LLS CR++ N ELGE  S+K+  L P++    VLLS
Sbjct: 594 DVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLS 636



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 162/647 (25%), Positives = 293/647 (45%), Gaps = 18/647 (2%)

Query: 58  KSRVLGTQVHGHIVK-LGFTNDIFLQN------NLIAMYSKCGYFGWGLRVFDEMAER-- 108
           KS   G  +H H++K L  T++  L N       L+ +Y  C        VFD+M  R  
Sbjct: 23  KSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPK 82

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           N+V W L++ A   NG ++  + +Y  M   G  PN F    V+K C ++  +  G  IH
Sbjct: 83  NVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIH 142

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           C   ++R+E N +V  ++++FYAK G +  A+ VF  +   DV  WN+MI G++     +
Sbjct: 143 CDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSY 202

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           + +  +   +   ++ +  T +  L   + V     G++IHG  +R      + +   ++
Sbjct: 203 DEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGIL 262

Query: 289 DMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-- 345
           D+Y K   +DYA ++F+ M   K+ ++W+ + G +       +   LF + ++       
Sbjct: 263 DVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIV 322

Query: 346 -NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + VT + ++R C  L DL  G  L C A+  GF+ +  V ++L+ M+ +CG +  A   
Sbjct: 323 LSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRF 382

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  ++  ++  ++SGY  N    + L+ F  +  SG+     T   V+  C      
Sbjct: 383 FNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGL 442

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                 H   I  GF++   IC++LI  Y   G++D + +  +   +  + SW  M+ A 
Sbjct: 443 HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAY 502

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTE 583
              G   EA+ +F ++   G KPD+     ++++C+  G     K   +      G    
Sbjct: 503 GIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPR 562

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           +   + ++D  ++ G  K      ++     DV V+  L+ A   +  V E  E   K K
Sbjct: 563 MEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNV-ELGEGVSK-K 620

Query: 644 LANLQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +  L P S   FV + +  S  G  D    +  +   Q G + SP C
Sbjct: 621 IQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQ-GFEKSPGC 666



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 197/411 (47%), Gaps = 8/411 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK    G ++H  I +L   +++++   L+  Y+KCG       VFD+M +R++V+W  +
Sbjct: 132 LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSM 191

Query: 117 VSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +S  ++  G +D   ++ V M+ N   PN   +  V+     + +   G  IH F ++  
Sbjct: 192 ISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG 250

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
              +  VG  +L+ Y K   +  A R+F    I  ++V  W+AM+G Y  C +  EAL +
Sbjct: 251 FVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEV-TWSAMVGAYVVCDFMREALEL 309

Query: 234 VSSMLF---EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
              +L    + I +   T    ++ C+ + D   G  +H   I+S     + + N L+ M
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   ++ A + F  M  +D +S+  +  G+ +N N  +   +F +  LSG  P   T 
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L  L  G    C A+ CGF  +  + ++LI M+ +CG ++ A  VFD +  
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + I +WN ++  Y  +    + L  F N+   G++ +  TF  ++  C  S
Sbjct: 490 RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHS 540



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 34  FCSDSFLRKDPIFL-----AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAM 88
           FC    L+ D I L     A  + +  NL     GT +H + +K GF  D+ + N L++M
Sbjct: 310 FCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSM 369

Query: 89  YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
           Y+KCG     +R F+EM  R+ VS+T I+S  +QNG  + GL+M+++M+ +G  P +  +
Sbjct: 370 YAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATL 429

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            SV+  C  +    +G   HC+A+      +  +  ++++ YAK G +  A +VF  +  
Sbjct: 430 ASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHK 489

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD---- 261
             +  WN MI  Y   G G EAL +  +M  EG+  D  TFI  +  CS   LVA+    
Sbjct: 490 RGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYW 549

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           F+   Q  G+I R E          ++D+  ++          E+M  + DV  W  L  
Sbjct: 550 FNAMTQDFGIIPRMEH------YACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLS 603

Query: 321 GFSENKN 327
                KN
Sbjct: 604 ACRVYKN 610


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 200/756 (26%), Positives = 360/756 (47%), Gaps = 49/756 (6%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHG 68
           + + KP+  F    K    L     +CS ++  +   F   +  LS  + S     Q H 
Sbjct: 1   MLSLKPTHLF----KHCSSLLQQRLYCSPTWSHEPNDFNYLNHLLSNQISSLKTLLQSHA 56

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
            I+  G++N+IF+ + LI++Y+          +FDE+  R+   W  I+ A   NGE+  
Sbjct: 57  FIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSR 116

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVL 187
            L  Y  M+ +  +PN F +  ++  C  +    +G SIH    K+ +   +  VG S +
Sbjct: 117 ALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFV 176

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG---YGFEALNVVSSMLFEGITM 244
             Y+K G +  A  VF  I   DV  W A++ G    G    G E L  +  +  +G   
Sbjct: 177 YMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERP 236

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  T     Q C  +     GR +HGL++++ ++ S  + + L+ MY K    + A + F
Sbjct: 237 NFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSF 296

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             + +KD+ISW ++   +S      +   +F + ++SG  P+ +  S +L      + + 
Sbjct: 297 CEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVF 356

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
                  L +   +  ++ V ++L+ M+C+ G +++A   F  V+ +N   WN ++SGY 
Sbjct: 357 EAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGY- 415

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                                  G T               +   IH  +IK        
Sbjct: 416 -----------------------GAT--------------HLARSIHCYMIKNLMDENVS 438

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +SLI  Y   G L  +        R D+ +W  ++S+  H GH  EA++++  +V   
Sbjct: 439 VNNSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLED 497

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KP+   L ++L++C+ + + +  + +H ++    F   + +A+A+ID YAKCG ++ +R
Sbjct: 498 LKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSR 557

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+ S +  DVI +N +I  Y  HG    A+E F +M+ ++ +P+  TF++V+SAC+H 
Sbjct: 558 EIFN-SMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHA 616

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV +G  LF  M   Y + P+   Y C+VD+L R+G L++A+ ++  MP  P   V+ +
Sbjct: 617 GLVKEGKYLFGKMQ-DYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGA 675

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C+IH   E+G   ++  +    +ND  +V++S
Sbjct: 676 LLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMIS 711


>gi|302819709|ref|XP_002991524.1| hypothetical protein SELMODRAFT_133644 [Selaginella moellendorffii]
 gi|300140726|gb|EFJ07446.1| hypothetical protein SELMODRAFT_133644 [Selaginella moellendorffii]
          Length = 809

 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 200/757 (26%), Positives = 346/757 (45%), Gaps = 57/757 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RNLVSWTLIVSAAI 121
           G +V G+  + G +    +   ++  Y KC      + VFDE+ E RN+V+WT++V+A +
Sbjct: 49  GRRVRGYSDECGLSAATAVATAIVNFYGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYV 108

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G           M+  G  PNEF   + +  C        G ++H +  +  +E NP 
Sbjct: 109 QAGHHKEAFCCLRRMQLEGISPNEFTFVNALGSCGCGDDLARGRTLHGWISEGDMESNPV 168

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           V  ++++ Y++ G V  A +VF  + S   DV  W +M+  Y  C +   A  +   ML 
Sbjct: 169 VANALVSMYSRCGGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQCAFSDAAFRLFQKMLL 228

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EGI  DK T I  L  C   +    G+ +H  I  S  E  + + NALIDMY     +  
Sbjct: 229 EGIRPDKITLIAILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKT 288

Query: 300 AFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
           A  +F ++   +D +SWNTL G   E    G     F +  L+G +PN +T  ++L  C 
Sbjct: 289 ARDIFGQLVPYEDAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGKPNSMTLVLILNLCA 348

Query: 359 KLLDLDLGLQLQCLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           K   + LG  + C    C G L++E V +S+I M+ +CGAVE A +VF     +   +WN
Sbjct: 349 KGGLVQLGRAIHCWICDCCGHLEDELVRASIIRMYGKCGAVEDAQAVF-RAGEETFVSWN 407

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            L++ +  +      L++  +    G + +  T   ++  C   ++ +   ++H  ++ +
Sbjct: 408 ALVAAFADSGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGS 467

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+ S   + +++I  Y   G ++++F   N     D+ +  A+++A +      EA+ +F
Sbjct: 468 GWESGTVLGTAVISMYGRCGSVEDAFRAFNTVAEKDLVAMNAIITACIQHNEFGEALNLF 527

Query: 538 HSLVEAGEKPDEYILGTILNSCAA-----------IGAYQRT------------------ 568
             +   G KP +    ++LN+C++           +  + R                   
Sbjct: 528 RMMQLEGMKPSKATFVSVLNACSSPRDANLKGDEVLEIFHRMQLEGFRPNKISFVNFLTA 587

Query: 569 ----------------KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
                           K+I    ++     +  +    I+ YAK G++  A   F Q  +
Sbjct: 588 ASSNSSGSIISSAQSCKAIQALAVQAQVFRDDVIKHGFINLYAKLGNLNQADQVF-QDIS 646

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             DV+ +N++I AYA +   ++A+E+F +M+L  + P   TFVS++SACSH G       
Sbjct: 647 RRDVVSWNSIIAAYARNATAAQALELFLEMQLQGIPPDGITFVSILSACSHSGQAASAVF 706

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL-----LS 727
            F SM   YG+   P+  GCLVD+ SR+G L  A+ + E             L     L 
Sbjct: 707 YFSSMAIDYGVPAGPEHQGCLVDLFSRSGRLSIAEELSESSSGGGGGGGGGGLQWMMVLG 766

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
           GC++  +   G   +E+++ +     A HV+LS   R
Sbjct: 767 GCQVQNDARRGVAVAERVMEMERSCAAGHVVLSNLLR 803



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 263/556 (47%), Gaps = 15/556 (2%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +V+A   +G+FD   + +  M  +G   ++  + +V   C    A E G  +  ++ +  
Sbjct: 1   MVAAFSHHGQFDESFRTFQSMLQSGVSIDKITLLTVFNACTKAVALEEGRRVRGYSDECG 60

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVV 234
           +     V  +++NFY K  ++  A  VF  I  + +V  W  M+  Y   G+  EA   +
Sbjct: 61  LSAATAVATAIVNFYGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYVQAGHHKEAFCCL 120

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  EGI+ +++TF+NAL  C    D   GR +HG I   ++E +  + NAL+ MY + 
Sbjct: 121 RRMQLEGISPNEFTFVNALGSCGCGDDLARGRTLHGWISEGDMESNPVVANALVSMYSRC 180

Query: 295 SGMDYAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
            G++ A KVF   R   +DVI W ++   + +         LF K +L G RP+ +T   
Sbjct: 181 GGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQCAFSDAAFRLFQKMLLEGIRPDKITLIA 240

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN-VSYK 411
           +L  C     L  G  +       GF  +  V ++LI M+  C  ++ A  +F   V Y+
Sbjct: 241 ILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQLVPYE 300

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           +  +WN LL            ++ F  +  +G + N  T   ++  C +    Q+   IH
Sbjct: 301 DAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGKPNSMTLVLILNLCAKGGLVQLGRAIH 360

Query: 472 GAIIKTGFSSCGY-----ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             I       CG+     + +S+I+ Y   G ++++       E     SW A+++A   
Sbjct: 361 CWICDC----CGHLEDELVRASIIRMYGKCGAVEDAQAVFRAGEE-TFVSWNALVAAFAD 415

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G   +++   HS    G + DE  L +ILN+C +    +  + +H  V+  G+ +   +
Sbjct: 416 SGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGSGWESGTVL 475

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +AVI  Y +CG ++ A  AF+ +    D++  N +I A   H    EA+ +F  M+L  
Sbjct: 476 GTAVISMYGRCGSVEDAFRAFN-TVAEKDLVAMNAIITACIQHNEFGEALNLFRMMQLEG 534

Query: 647 LQPSQATFVSVMSACS 662
           ++PS+ATFVSV++ACS
Sbjct: 535 MKPSKATFVSVLNACS 550



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 202/470 (42%), Gaps = 50/470 (10%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D I L   L   ++      G  VH  I   GF  D+ ++N LI MY  C       
Sbjct: 231 IRPDKITLIAILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTAR 290

Query: 100 RVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +F ++    + VSW  ++ A I+ G+  + ++ + +M+ NG  PN   +  ++ +C   
Sbjct: 291 DIFGQLVPYEDAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGKPNSMTLVLILNLCAKG 350

Query: 159 GASEFGYSIHCFALKI--RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           G  + G +IHC+       +E +  V  S++  Y K G V  A+ VF +     V  WNA
Sbjct: 351 GLVQLGRAIHCWICDCCGHLE-DELVRASIIRMYGKCGAVEDAQAVFRAGEETFVS-WNA 408

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++  +A  G   ++L  + S   EG   D+ T  + L  C    D   GR++H  ++ S 
Sbjct: 409 LVAAFADSGMAEKSLRSLHSTQLEGFQADEITLASILNACESPQDLKFGRKVHKQVVGSG 468

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            E    +  A+I MY +   ++ AF+ F  +A+KD+++ N +     ++   G+  +LF 
Sbjct: 469 WESGTVLGTAVISMYGRCGSVEDAFRAFNTVAEKDLVAMNAIITACIQHNEFGEALNLFR 528

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLG----------LQL----------------- 369
              L G +P+  TF  +L  C    D +L           +QL                 
Sbjct: 529 MMQLEGMKPSKATFVSVLNACSSPRDANLKGDEVLEIFHRMQLEGFRPNKISFVNFLTAA 588

Query: 370 ------------------QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
                             Q LA+      ++ +    I ++ + G +  A  VF ++S +
Sbjct: 589 SSNSSGSIISSAQSCKAIQALAVQAQVFRDDVIKHGFINLYAKLGNLNQADQVFQDISRR 648

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           ++ +WN +++ Y  N   A  L+ F  +   G+  +G TF  ++  C  S
Sbjct: 649 DVVSWNSIIAAYARNATAAQALELFLEMQLQGIPPDGITFVSILSACSHS 698



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 176/395 (44%), Gaps = 3/395 (0%)

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +   FS +    ++   F   + SG   + +T   +   C K + L+ G +++  +  CG
Sbjct: 1   MVAAFSHHGQFDESFRTFQSMLQSGVSIDKITLLTVFNACTKAVALEEGRRVRGYSDECG 60

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTF 436
                 V ++++  + +C  ++ A +VFD +   +N+ TW  +++ Y       +     
Sbjct: 61  LSAATAVATAIVNFYGKCRELDNAIAVFDEIEEARNVVTWTVMVAAYVQAGHHKEAFCCL 120

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G+  N  TF   + +C   ++      +HG I +    S   + ++L+  Y   
Sbjct: 121 RRMQLEGISPNEFTFVNALGSCGCGDDLARGRTLHGWISEGDMESNPVVANALVSMYSRC 180

Query: 497 GQLDNSFEFSNGAER--LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           G ++ + +   G      D+  W +M++A      +  A  +F  ++  G +PD+  L  
Sbjct: 181 GGVEEAAKVFAGVRSGTRDVIMWTSMVAAYGQCAFSDAAFRLFQKMLLEGIRPDKITLIA 240

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           IL +C +       K +H F+   GF  ++ V +A+ID Y  C D+K AR  F Q     
Sbjct: 241 ILGACKSSSFLPAGKLVHNFISSSGFELDLVVRNALIDMYGSCRDLKTARDIFGQLVPYE 300

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +NTL+ A    G V  A++ F +M+L   +P+  T V +++ C+  GLV  G  + 
Sbjct: 301 DAVSWNTLLGALIERGQVGVAIQRFQEMQLNGGKPNSMTLVLILNLCAKGGLVQLGRAIH 360

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
             +    G          ++ M  + G +EDA+ V
Sbjct: 361 CWICDCCGHLEDELVRASIIRMYGKCGAVEDAQAV 395


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  295 bits (756), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 176/578 (30%), Positives = 294/578 (50%), Gaps = 2/578 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++L+   + G++  A RVF  +   DV  WN M+GGY   G+  EAL++   ML+ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D YTF   L+ C  + D+ +GR++H  ++R      + ++NAL+ MY K   +  A 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF+ MA  D ISWN +  G  EN        LF   + +  +PN +T + +    G L 
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           ++    ++   A+  GF  +    +SLI M+   G +  A  +F  +  K+  +W  ++S
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N      L+ +  +    V  +  T    +  C       +  ++H      GF  
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L++ Y     +D + E        D+ SW +M++       + EA+  F  ++
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KP+       L++CAA GA +  K IH +V++ G  +E YV +A++D Y KCG   
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F    +  DV+ +N ++  +  HGL   A+ +F++M      P + TFV+++ AC
Sbjct: 552 YAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S  G+V +G  LF  M  ++ + P+   Y C+VD+LSR G L +A ++I  MP +P   V
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + +LL+GCRIH + ELGE A++ +L L P + A HVLL
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLL 708



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/576 (25%), Positives = 271/576 (47%), Gaps = 6/576 (1%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L N +++M  + G      RVF +M ER++ SW ++V    + G  +  L +Y  M   G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+ +    V++ C  +     G  +H   L+        V  +++  YAK GD+ AA 
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF  ++  D   WNAMI G+         L +  +ML   +  +  T  +      +++
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS 312

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           +    +++HG  ++      ++  N+LI MY     M  A K+F RM  KD +SW  +  
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +N  P +   ++    L    P+ VT +  L  C  L  LD+G++L  LA + GF+ 
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIR 432

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V ++L+ M+ +   ++ A  VF  ++ K++ +W+ +++G+CFN    + L  F  + 
Sbjct: 433 YVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML 492

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
              V+ N  TF   +  C  +   +   +IH  +++ G  S GY+ ++L+  YV  GQ  
Sbjct: 493 -GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551

Query: 501 NSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            ++ +FS  +E+ D+ SW  M+S  V  G    A+++F+ +VE GE PDE     +L +C
Sbjct: 552 YAWAQFSVHSEK-DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610

Query: 560 AAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           +  G   Q  +  H    K      +   + ++D  ++ G +  A    ++     D  V
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +  L+     H  V E  E+  K+ L  L+P+   +
Sbjct: 671 WGALLNGCRIHRHV-ELGELAAKVIL-ELEPNDVAY 704



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 238/504 (47%), Gaps = 20/504 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VH H+++ GF +++ + N L+ MY+KCG      +VFD MA  + +SW  +++   
Sbjct: 215 MGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHF 274

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N E + GL++++ M  N   PN   + SV      +    F   +H FA+K     +  
Sbjct: 275 ENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVA 334

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              S++  Y  LG +  A ++F  + + D   W AMI GY   G+  +AL V + M    
Sbjct: 335 FCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHN 394

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D  T  +AL  C+ +   D+G ++H L         + + NAL++MY KS  +D A 
Sbjct: 395 VSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAI 454

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ MA+KDV+SW+++  GF  N    +    F +++L   +PN VTF   L  C    
Sbjct: 455 EVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYF-RYMLGHVKPNSVTFIAALSACAATG 513

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    L CG   E  V ++L+ ++ +CG    A + F   S K++ +WN +LS
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+  +      L  F  + E G   +  TF  ++  C R+    + G     ++   FS 
Sbjct: 574 GFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRA-GMVIQGWELFHMMTEKFSI 632

Query: 482 CG----YICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTI 536
                 Y C   + S V  G+L  ++   N    + D A WGA+++              
Sbjct: 633 VPNLKHYACMVDLLSRV--GKLTEAYNLINRMPIKPDAAVWGALLNG-----------CR 679

Query: 537 FHSLVEAGEKPDEYILGTILNSCA 560
            H  VE GE   + IL    N  A
Sbjct: 680 IHRHVELGELAAKVILELEPNDVA 703



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 14/381 (3%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S++++  + S V    ++HG  VK GF  D+   N+LI MY+  G  G   ++F  M  +
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETK 362

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + +SWT ++S   +NG  D  L++Y  M+ +   P++  + S +  C  +G  + G  +H
Sbjct: 363 DAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLH 422

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A      +   V  ++L  YAK   +  A  VF  ++  DV  W++MI G+      F
Sbjct: 423 ELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF 482

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL     ML   +  +  TFI AL  C+       G++IH  ++R  +     + NAL+
Sbjct: 483 EALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALL 541

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           D+Y+K     YA+  F   ++KDV+SWN +  GF  +       SLF++ +  G  P+ V
Sbjct: 542 DLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEV 601

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAH 402
           TF  LL  C +      G+ +Q   L     ++ ++  +L +  C      R G +  A+
Sbjct: 602 TFVALLCACSR-----AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656

Query: 403 SVFDNVSYK-NITTWNELLSG 422
           ++ + +  K +   W  LL+G
Sbjct: 657 NLINRMPIKPDAAVWGALLNG 677



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 5/295 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++H      GF   + + N L+ MY+K  +    + VF  MAE+++VSW+ +++   
Sbjct: 417 VGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC 476

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N      L  Y         PN     + +  C + GA   G  IH + L+  I    +
Sbjct: 477 FNHRSFEAL-YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y K G  + A   F   S  DV  WN M+ G+   G G  AL++ + M+  G
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 595

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D+ TF+  L  CS       G ++ H +  +  +  ++     ++D+  +   +  A
Sbjct: 596 EHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655

Query: 301 FKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           + +  RM  K D   W  L  G   +++  +   L  K IL    PN V + +LL
Sbjct: 656 YNLINRMPIKPDAAVWGALLNGCRIHRHV-ELGELAAKVILE-LEPNDVAYHVLL 708


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  295 bits (756), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 167/611 (27%), Positives = 308/611 (50%), Gaps = 2/611 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+++C  + + E G  +H       +  +  +G  ++  Y   GD+    R+F  I +D
Sbjct: 62  SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILND 121

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            +  WN ++  YA  G   E++ +   M   GI  D YTF   L+G +  A     +++H
Sbjct: 122 KIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVH 181

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G +++       ++VN+LI  Y K   ++ A  +F+ ++D+DV+SWN++  G + N    
Sbjct: 182 GYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSR 241

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
                F + +  G   +  T   +L  C  + +L LG  L    +  GF       ++L+
Sbjct: 242 NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +  A+ VF  +    I +W  +++ +       + +  F  +   G+  +  
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIY 361

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
               VV  C  S +     ++H  I K    S   + ++L+  Y   G ++ +    +  
Sbjct: 362 AVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQL 421

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              ++ SW  M+         +EA+ +F  + +   KPD+  +  +L +CA + A ++ +
Sbjct: 422 PVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGR 480

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH  +++ G+ ++++VA A++D Y KCG +  A+  FD      D+I++  +I  Y  H
Sbjct: 481 EIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDM-IPKKDMILWTVMIAGYGMH 539

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   EA+  F+KM++A ++P +++F S++ AC+H GL+ +G  LF SM S+  ++P  + 
Sbjct: 540 GFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEH 599

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L R+G L  A   IE MP +P   ++ +LLSGCRIH + EL E  +E +  L 
Sbjct: 600 YACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELE 659

Query: 750 PKNDAAHVLLS 760
           P+N   +VLL+
Sbjct: 660 PENTRYYVLLA 670



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 243/502 (48%), Gaps = 40/502 (7%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +VHG+++KLGF +   + N+LIA Y KCG       +FDE+++R++VSW  ++S    NG
Sbjct: 179 RVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNG 238

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               GL+ ++ M   G   +   + +V+  C ++G    G ++H + +K           
Sbjct: 239 FSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNN 298

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L+ Y+K G++  A  VF  +    +  W ++I  +   G  +EA+ +   M  +G+  
Sbjct: 299 TLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRP 358

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D Y   + +  C+     D GR++H  I ++ +  ++ + NAL++MY K   M+ A  +F
Sbjct: 359 DIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIF 418

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            ++  K+++SWNT+ GG+S+N  P +   LF   +    +P+ VT + +L  C  L  L+
Sbjct: 419 SQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLD-MQKQLKPDDVTMACVLPACAGLAALE 477

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G ++    L  G+  + +V  +L+ M+ +CG + +A  +FD +  K++  W  +++GY 
Sbjct: 478 KGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYG 537

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF----- 479
            +    + + TF  +  +G+E    +F  ++  C            H  ++K G+     
Sbjct: 538 MHGFGKEAISTFEKMRVAGIEPEESSFTSILYAC-----------THSGLLKEGWKLFDS 586

Query: 480 --SSCG-------YICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGH 529
             S C        Y C  ++   +  G L  +++F      + D A WGA++S       
Sbjct: 587 MKSECNIEPKLEHYAC--MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSG------ 638

Query: 530 NHEAVTIFHSLVEAGEKPDEYI 551
                   H  VE  EK  E+I
Sbjct: 639 -----CRIHHDVELAEKVAEHI 655



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 250/562 (44%), Gaps = 17/562 (3%)

Query: 15  SCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKS-------------LSLSENLKSRV 61
           + H + T  +  ++C   +FC    LR     L++S             L L   LKS  
Sbjct: 18  TTHNNVTVDKNAKIC---KFCEMGDLRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLE 74

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G +VH  I   G   D  L   L+ MY  CG    G R+FD +    +  W L++S   
Sbjct: 75  DGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYA 134

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + G +   + ++  M+  G   + +    V+K   +         +H + LK+       
Sbjct: 135 KIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNA 194

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  Y K G+V +A  +F  +S  DV  WN+MI G    G+    L     ML  G
Sbjct: 195 VVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLG 254

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  T +N L  C+ V +  +GR +H   +++     +   N L+DMY K   ++ A 
Sbjct: 255 VDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGAN 314

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF +M +  ++SW ++           +   LF +    G RP+    + ++  C    
Sbjct: 315 EVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSN 374

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G ++              V+++L+ M+ +CG++E A+ +F  +  KNI +WN ++ 
Sbjct: 375 SLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIG 434

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N    + L+ F ++ +  ++ +  T   V+  C      +   +IHG I++ G+ S
Sbjct: 435 GYSQNSLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFS 493

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++  +L+  YV  G L  + +  +   + DM  W  M++     G   EA++ F  + 
Sbjct: 494 DLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMR 553

Query: 542 EAGEKPDEYILGTILNSCAAIG 563
            AG +P+E    +IL +C   G
Sbjct: 554 VAGIEPEESSFTSILYACTHSG 575



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 181/382 (47%), Gaps = 3/382 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   L    N+ +  LG  +H + VK GF+  +   N L+ MYSKCG       VF
Sbjct: 258 DSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVF 317

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            +M E  +VSWT I++A ++ G     + ++ +M++ G  P+ +AV SV+  C    + +
Sbjct: 318 VKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLD 377

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H    K  +  N  V  +++N YAK G +  A  +F  +   ++  WN MIGGY+
Sbjct: 378 KGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYS 437

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EAL +   M  + +  D  T    L  C+ +A  + GR+IHG I+R      + 
Sbjct: 438 QNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLH 496

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  AL+DMY+K   +  A ++F+ +  KD+I W  +  G+  +    +  S F K  ++G
Sbjct: 497 VACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAG 556

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             P   +F+ +L  C     L  G +L   +   C    +    + ++ +  R G +  A
Sbjct: 557 IEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRA 616

Query: 402 HSVFDNVSYK-NITTWNELLSG 422
           +   + +  K +   W  LLSG
Sbjct: 617 YKFIETMPIKPDAAIWGALLSG 638



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 5/316 (1%)

Query: 395 CGAVEMAHSVFDNVSYKNITT-WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           CG+     +     ++ N+T   N  +  +C      + +K       S +E+N  T+  
Sbjct: 5   CGSSVGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCS 62

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           V++ C   ++ +   ++H  I   G +    + + L+  YVN G L       +G     
Sbjct: 63  VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDK 122

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           +  W  +MS     G+  E+V +F  + E G + D Y    +L   AA    +  K +H 
Sbjct: 123 IFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHG 182

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           +V+KLGF +   V +++I AY KCG+++ AR+ FD+  +  DV+ +N++I     +G   
Sbjct: 183 YVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDE-LSDRDVVSWNSMISGCTMNGFSR 241

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
             +E F +M    +    AT V+V+ AC++ G +  G  L  +   + G          L
Sbjct: 242 NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRAL-HAYGVKAGFSGGVMFNNTL 300

Query: 694 VDMLSRNGYLEDAKHV 709
           +DM S+ G L  A  V
Sbjct: 301 LDMYSKCGNLNGANEV 316



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 2/183 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D + +A  L     L +   G ++HGHI++ G+ +D+ +   L+ MY KCG      
Sbjct: 456 LKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQ 515

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FD + +++++ WT++++    +G     +  +  M+  G  P E +  S++  C   G
Sbjct: 516 QLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSG 575

Query: 160 ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAM 217
             + G+ +      +  IE        +++   + G+++ A +   ++    D   W A+
Sbjct: 576 LLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGAL 635

Query: 218 IGG 220
           + G
Sbjct: 636 LSG 638


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 194/706 (27%), Positives = 341/706 (48%), Gaps = 12/706 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH HIV      +  L   +  MY++C  F   + +FD M +R    W +++   + 
Sbjct: 69  GRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLA 128

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  L++Y  M      P+       +  C  +     G SIH + +      N  +
Sbjct: 129 ADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSI 187

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  YA+ G +  A   F          WNA++   A  G+   A+ +   M  E  
Sbjct: 188 QSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQH 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDYAF 301
                +   AL  C+       G QIH  I +SE+    + ++NALI MY++   +D A 
Sbjct: 246 QCSDRSCAIALGACAAAGHLRGGIQIHDKI-QSEIHGTRVLVLNALISMYVRCGKLDEAL 304

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL---LRQCG 358
           +VF  M  ++V+SW ++    ++  +   +  LF   I  G  PN  T++ +   +   G
Sbjct: 305 RVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLG 364

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTW 416
           +   LD G ++       G   +  V +SLI M+ R G +  A  VFD++  + K + ++
Sbjct: 365 RDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSF 424

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++S Y  N      L+ F  +   GV  N  TF  V+  C    +      IH  +I+
Sbjct: 425 TTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIE 484

Query: 477 TGF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +G  SS  +  +SL+  Y   G L  +       +  D+ +W  +++A V  G+N  A+ 
Sbjct: 485 SGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALD 544

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           ++  ++++G  PD   L T+L +CA +G     + IH   ++     + +  +A+   YA
Sbjct: 545 LYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYA 604

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++ A   + +   S DV  + +++ A++  GL S A+E++ +M+   ++P++ TF+
Sbjct: 605 KCGSLEKATRLYRRCRGS-DVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFI 663

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+ +CS  GLV +G   F S+ S YG QPS + +GC+VD+L R G L DA+ +++ MPF
Sbjct: 664 PVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPF 723

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            P    ++SLLS C++H + E+G  A+E LL L P++ +  V LS+
Sbjct: 724 YPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQ 769



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 218/473 (46%), Gaps = 15/473 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + N L+ C      D GR++H  I+   +  +  +   +  MY +    D A  +F+ M 
Sbjct: 53  YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           D+    WN L   F     P  T  L+ +  +  ++P+   F   +  CG++ DL  G  
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    +  G     ++ S+L+ M+ +CG +++A + FD+        WN ++S       
Sbjct: 173 IH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231

Query: 429 DADVLKTFCNIWESGVEVNGCT-FFYVVETCCRSENQQMVG--QIHGAIIKTGFSSCGYI 485
               ++ F  +     E + C+     +     +    + G  QIH  I      +   +
Sbjct: 232 HRRAIELFFQM-----EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLV 286

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++LI  YV  G+LD +          ++ SW +M++A+   GH   +V +F  ++  G 
Sbjct: 287 LNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGI 346

Query: 546 KPDEYILGTILNSCAAIGA---YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            P+E    +++++ A +G      R + IH  +   G + +  V +++I+ YA+ G +  
Sbjct: 347 NPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAE 406

Query: 603 ARMAFDQSF-NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           AR  FD    NS  V+ + T+I AYAH+G   +A+EIF +M    + P++ TF +V++AC
Sbjct: 407 AREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAAC 466

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPS-PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              G +  G  + + M  + G+  S P  Y  LVDM ++ G L  A  V E M
Sbjct: 467 VAIGDLASGAWIHERM-IESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/528 (23%), Positives = 234/528 (44%), Gaps = 20/528 (3%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            ++++ C +  A + G  +H   +  R+ +N  +G  V   YA+      A  +F ++  
Sbjct: 54  ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
               CWN ++  +       + L +   M  E        F+ A+  C  + D   GR I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  +       + SI +AL+ MY +   +D A   F+   +     WN +    +   + 
Sbjct: 174 HYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN----- 383
            +   LF  F +   + +  + +I L  C     L  G+Q     +H     E +     
Sbjct: 233 RRAIELF--FQMEQHQCSDRSCAIALGACAAAGHLRGGIQ-----IHDKIQSEIHGTRVL 285

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++LI M+ RCG ++ A  VF ++ ++N+ +W  +++        +  +K F  +   G
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEG 345

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           +  N  T+  VV          ++ +   IH  I  +G  +   + +SLI  Y   G L 
Sbjct: 346 INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLA 405

Query: 501 NSFEFSNG--AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            + E  +        + S+  M+SA  H GH  +A+ IF  +   G  P+E    T+L +
Sbjct: 406 EAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAA 465

Query: 559 CAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C AIG       IH  +I+ G + ++ +  ++++D YAKCGD+  A   F ++  + D++
Sbjct: 466 CVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVF-ETMKTKDLV 524

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            + T+I A    G    A++++D+M  + + P  AT  +++ AC++ G
Sbjct: 525 AWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLG 572



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 11/149 (7%)

Query: 30  GNNQFCSDSFLR-------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           GNN+   D + R        D   L+  L    NL    +G ++H   ++     D   Q
Sbjct: 537 GNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQ 596

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N L AMY+KCG      R++      ++ +WT +++A  Q G   + L++Y +M++ G  
Sbjct: 597 NALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVR 656

Query: 143 PNEFAVGSVMKVCVSMG----ASEFGYSI 167
           PNE     V+  C   G      EF +SI
Sbjct: 657 PNEVTFIPVLISCSQAGLVAEGREFFHSI 685


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 175/572 (30%), Positives = 292/572 (51%), Gaps = 6/572 (1%)

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTF 249
           + LG +  A  +F S+   DV  +N ++ G++       +L+V + +     +  +  T+
Sbjct: 63  SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTY 122

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             A+   S   D   GR IHG  +    +  + + + ++ MY K   ++ A KVF+RM +
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           KD I WNT+  G+ +N+   ++  +F   I  S +R +  T   +L    +L +L LG+Q
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  LA   G    + V +  I ++ +CG ++M  ++F      +I  +N ++ GY  N  
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L  F  +  SG  +   T   +V     S +  ++  IHG  +K+ F S   + ++
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTA 359

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L   Y    +++++ +  + +    + SW AM+S     G   +A+++F  + ++   P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
              +  IL++CA +GA    K +H  V    F + +YV++A+I  YAKCG I  AR  FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                N+V  +NT+I  Y  HG   EA+ IF +M  + + P+  TF+ V+ ACSH GLV 
Sbjct: 480 LMTKKNEV-TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G  +F SM  +YG +PS   Y C+VD+L R G+L+ A   IE M  +P  +V+ +LL  
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CRIH +  L    SEKL  L P N   HVLLS
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/598 (21%), Positives = 245/598 (40%), Gaps = 8/598 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H  I+  GF NDI L   L    S  G   +   +F  +   ++  + +++     N 
Sbjct: 38  QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                L ++  + K+    PN       +           G  IH  A+    +    +G
Sbjct: 98  SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K   V  A +VF  +   D   WN MI GY       E++ V   ++ E  T
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217

Query: 244 -MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T ++ L   + + +  +G QIH L  ++       ++   I +Y K   +     
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F      D++++N +  G++ N     + SLF + +LSG+R    T   L+   G L+ 
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM- 336

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             L   +    L   FL   +V+++L  ++ +   +E A  +FD    K++ +WN ++SG
Sbjct: 337 --LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    D +  F  + +S    N  T   ++  C +     +   +H  +  T F S 
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ ++LI  Y   G +  +    +   + +  +W  M+S     G   EA+ IF+ ++ 
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +G  P       +L +C+  G  +    I +  + + GF   V   + ++D   + G ++
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            A    +         V+ TL+ A   H   + A  + +  KL  L P    +  ++S
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE--KLFELDPDNVGYHVLLS 630



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/516 (23%), Positives = 222/516 (43%), Gaps = 35/516 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ +    A ++S +   +    G  +HG  V  G  +++ L +N++ MY K        
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSM 158
           +VFD M E++ + W  ++S   +N  +   ++++ D+        +   +  ++     +
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  IH  A K     + +V    ++ Y+K G +     +F      D+  +NAMI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G    +L++   ++  G  +   T ++ +    +     +   IHG  ++S   
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFL 351

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              S+  AL  +Y K + ++ A K+F+   +K + SWN +  G+++N       SLF + 
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S   PN VT + +L  C +L  L LG  +  L     F     V+++LI M+ +CG++
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  +FD ++ KN  TWN ++SGY  +    + L  F  +  SG+     TF  V+  C
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                       H  ++K G      I +S+I  Y         FE S       +  + 
Sbjct: 532 S-----------HAGLVKEG----DEIFNSMIHRY--------GFEPS-------VKHYA 561

Query: 519 AMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILG 553
            M+  L   GH   A+    ++ +E G    E +LG
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 186/403 (46%), Gaps = 4/403 (0%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
             ++S  R D   L   L     L+   LG Q+H    K G  +  ++    I++YSKCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
               G  +F E  + ++V++  ++     NGE ++ L ++ ++  +G       + S++ 
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
           V    G     Y+IH + LK     +  V  ++   Y+KL ++ +A ++F       +  
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WNAMI GY   G   +A+++   M     + +  T    L  C+ +    +G+ +H L+ 
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            ++ E SI +  ALI MY K   +  A ++F+ M  K+ ++WNT+  G+  +    +  +
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMF 392
           +F++ + SG  P  VTF  +L  C     +  G ++    +H  GF       + ++ + 
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            R G ++ A    + +S +  ++  E L G C    D ++ +T
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/184 (20%), Positives = 85/184 (46%), Gaps = 2/184 (1%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           RS +   + Q H  II  GF +   + + L +   + G +  + +     +R D+  +  
Sbjct: 29  RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +M         H ++++F  L ++ + KP+       +++ +     +  + IH   +  
Sbjct: 89  LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G ++E+ + S ++  Y K   ++ AR  FD+     D I++NT+I  Y  + +  E++++
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDR-MPEKDTILWNTMISGYRKNEMYVESIQV 207

Query: 639 FDKM 642
           F  +
Sbjct: 208 FRDL 211


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  295 bits (755), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 170/572 (29%), Positives = 298/572 (52%), Gaps = 4/572 (0%)

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           A  G +  A     ++   D    N MI G+A  G    AL     ML +G   D++TF 
Sbjct: 52  AAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFP 111

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             ++ C+ +   D GR  HG++I+  +E  +   N+L+  Y K   ++ A +VF+ M  +
Sbjct: 112 VVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR 171

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL--LRQCGKLLDLDLGLQ 368
           D+++WNT+  G+  N       + F + +       H +  I+  L  C   +    G +
Sbjct: 172 DIVTWNTMVDGYVSNGLGSLALACFQE-MHDALEVQHDSVGIIAALAACCLEVSSMQGKE 230

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    +  G   +  V +SL+ M+C+CG V  A SVF  +  + + TWN ++ GY  N  
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             +    F  +   G++V   T   ++  C ++E+      +HG +++  F     + ++
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETA 350

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L++ Y   G++++S +         + SW  M++A +++    EA+T+F  L+     PD
Sbjct: 351 LLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPD 410

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
            + + T++ +   +G+ +  + IH ++I LG+     + +AV+  YA+ GD+  +R  FD
Sbjct: 411 YFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFD 470

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +   S DVI +NT+IM YA HG    A+E+FD+MK   LQP+++TFVSV++ACS  GLVD
Sbjct: 471 KMV-SKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVD 529

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G + F  M  +YGM P  + YGC+ D+L R G L +    IE MP  P+  V+ SLL+ 
Sbjct: 530 EGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            R   + ++ E+A+E++  L   N   +++LS
Sbjct: 590 SRNQNDIDIAEYAAERIFQLEHDNTGCYIVLS 621



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 202/401 (50%), Gaps = 3/401 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   HG ++KLG  +D++  N+L+A Y+K G      RVFD M  R++V+W  +V   + 
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVS 185

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVG--SVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NG   + L  + +M  +       +VG  + +  C    +S  G  IH + ++  +E++ 
Sbjct: 186 NGLGSLALACFQEMH-DALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDI 244

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG S+L+ Y K G+VA A  VF ++    V  WN MIGGYA      EA +    M  E
Sbjct: 245 KVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAE 304

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ ++  T IN L  C+       GR +HG ++R +    + +  AL++MY K   ++ +
Sbjct: 305 GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESS 364

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F ++A+K ++SWN +   +   +   +  +LF + +     P++ T S ++     L
Sbjct: 365 EKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLL 424

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L    Q+    +  G+ +   + +++++M+ R G V  +  +FD +  K++ +WN ++
Sbjct: 425 GSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMI 484

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            GY  +      L+ F  +  +G++ N  TF  V+  C  S
Sbjct: 485 MGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 197/433 (45%), Gaps = 3/433 (0%)

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           Y  M  +G  P+ F    V+K C  +G  + G + H   +K+ +E + +   S++ FYAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM--LFEGITMDKYTFI 250
           LG V  AERVF  +   D+  WN M+ GY   G G  AL     M    E +  D    I
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALE-VQHDSVGII 213

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            AL  C L      G++IHG +IR  +E  I +  +L+DMY K   + YA  VF  M  +
Sbjct: 214 AALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
            V++WN + GG++ N+ P +    F +    G +   VT   LL  C +      G  + 
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +   FL    + ++L+ M+ + G VE +  +F  ++ K + +WN +++ Y +     
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F  +    +  +  T   VV       + +   QIH  II  G++    I ++++
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G +  S E  +     D+ SW  M+      G    A+ +F  +   G +P+E 
Sbjct: 454 HMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNES 513

Query: 551 ILGTILNSCAAIG 563
              ++L +C+  G
Sbjct: 514 TFVSVLTACSVSG 526



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 147/299 (49%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S + G ++HG++++ G   DI +  +L+ MY KCG   +   VF  M  R +V+W  ++ 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
               N   D     ++ M+  G         +++  C    +S +G S+H + ++ +   
Sbjct: 284 GYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  ++L  Y K+G V ++E++F  I++  +  WN MI  Y +     EA+ +   +L
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            + +  D +T    +    L+      RQIH  II      +  I+NA++ MY +S  + 
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVV 463

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            + ++F++M  KDVISWNT+  G++ +        +F +   +G +PN  TF  +L  C
Sbjct: 464 ASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 6/319 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+     +S + G  VHG++V+  F   + L+  L+ MY K G      ++F ++A + L
Sbjct: 317 LAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTL 376

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  +++A +    +   + +++++      P+ F + +V+   V +G+      IH +
Sbjct: 377 VSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSY 436

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            + +   +N  +  +VL+ YA+ GDV A+  +F  + S DV  WN MI GYA  G G  A
Sbjct: 437 IIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTA 496

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALID 289
           L +   M + G+  ++ TF++ L  CS+    D G     L+++   +   I     + D
Sbjct: 497 LEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTD 556

Query: 290 MYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN-- 346
           +  +   +    +  E M  D     W +L    S N+N    A    + I      N  
Sbjct: 557 LLGREGDLREVLQFIESMPIDPTSRVWGSLLTA-SRNQNDIDIAEYAAERIFQLEHDNTG 615

Query: 347 -HVTFSILLRQCGKLLDLD 364
            ++  S +    G+  D++
Sbjct: 616 CYIVLSSMYADAGRWEDVE 634



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 4/281 (1%)

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           + SL+      G ++ A      V   +    N ++ G+      A  L  +  + E G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  TF  VV+ C R          HG +IK G     Y C+SL+  Y   G ++++  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY--ILGTILNSCAAI 562
             +G    D+ +W  M+   V  G    A+  F  + +A E   +   I+  +   C  +
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            + Q  K IH +VI+ G   ++ V ++++D Y KCG++  AR  F  +     V+ +N +
Sbjct: 224 SSMQ-GKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVF-ATMPLRTVVTWNCM 281

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           I  YA +    EA + F +M+   LQ    T +++++AC+ 
Sbjct: 282 IGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQ 322



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 19/238 (7%)

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL+ S    G++D + E        D      M+      G    A+  +  ++E G +P
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D +    ++  CA +G     ++ H  VIKLG   +VY  ++++  YAK G ++ A   F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGL 666
           D      D++ +NT++  Y  +GL S A+  F +M  A  +Q      ++ ++AC     
Sbjct: 166 D-GMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAAC----- 219

Query: 667 VDKGCLLFKSMDSQ--------YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
               CL   SM  +        +G++        L+DM  + G +  A+ V   MP +
Sbjct: 220 ----CLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273


>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 748

 Score =  295 bits (755), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 179/635 (28%), Positives = 316/635 (49%), Gaps = 6/635 (0%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+    L  +  M  N  +P+ F   S++K C S+    FG SIH   L      + ++
Sbjct: 24  HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVLVNGFSSDSYI 83

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++N YAK G +  A +VF  +   DV  W AMIG Y+  G   EA ++V  M F+GI
Sbjct: 84  SSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGI 143

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                TF+  L G S +        +H   +    EC I+++N+++++Y K   +  A +
Sbjct: 144 KPSPVTFLEMLSGISEITQLQC---LHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKE 200

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F++M  +D++SWNT+  GF+   N  +   L ++    G RP+  TF   L   G + D
Sbjct: 201 LFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCD 260

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L++G  L C  +  GF  + ++ ++LI M+ +CG  E ++ V + +  K++  W  ++SG
Sbjct: 261 LEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISG 320

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                     L  F  +  SG +++      VV +C +  +  +   +HG +++ G++  
Sbjct: 321 LMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLD 380

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-V 541
               +S I  Y   G LD S          D+ SW A++S     G   +A+ +F  +  
Sbjct: 381 TPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKF 440

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +  ++ D   + ++L +C++ GA    + IH  VI+        V +A++D Y+KCG ++
Sbjct: 441 KTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLE 500

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A+  F+ S    DV+ + TLI  Y  HG    A+EI+ +     ++P+   F++V+S+C
Sbjct: 501 AAQRCFN-SITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSC 559

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH G+V +G  +F SM   +G++P+ +   C+VD+L R   +EDA    +    +PS  V
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDV 619

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
              +L     +G  E+ +     ++ L P  DA H
Sbjct: 620 LGIILDASHANGKTEVEDIICRDMIELKPV-DAGH 653



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 272/536 (50%), Gaps = 27/536 (5%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           +N+ I   +  G   + L+  SSML   +  D +TF + L+ C+ +     G  IH  ++
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQKVL 73

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            +       I ++L+++Y K   + +A KVF+ M D+DV+ W  + G +S     G+  S
Sbjct: 74  VNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEACS 133

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDEENVTSSLIY 390
           L  +    G +P+ VTF  +L    ++       QLQCL   AL  GF  +  V +S++ 
Sbjct: 134 LVKEMRFQGIKPSPVTFLEMLSGISEI------TQLQCLHAFALVYGFECDIAVMNSMLN 187

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           ++C+C  V  A  +FD +  +++ +WN ++SG+ F    +++LK    + + G+  +  T
Sbjct: 188 LYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQT 247

Query: 451 F---FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
           F     V  T C  E  +M   +H  I+ TGF    ++ ++LI  Y+  G+ + S+    
Sbjct: 248 FGASLSVSGTMCDLEMGRM---LHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLE 304

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D+  W  M+S L+  G   +A+ +F  ++ +G       + +++ SCA +G++  
Sbjct: 305 TIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDL 364

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
             S+H +V++ G+  +    ++ I  YAKCG +  + + F++  N  D++ +N +I  +A
Sbjct: 365 GASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFER-MNERDLVSWNAIISGHA 423

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKG----CLLFKSMDSQYG 682
            HG + +A+ +F++MK   +Q   + T VS++ ACS  G +  G    C++ +S      
Sbjct: 424 QHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSF----- 478

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           ++P       LVDM S+ GYLE A+     + ++   + + +L++G   HG  ++ 
Sbjct: 479 IRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVS-WGTLIAGYGFHGKGDIA 533



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/617 (23%), Positives = 284/617 (46%), Gaps = 11/617 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D       L    +L+    G  +H  ++  GF++D ++ ++L+ +Y+K G  G   
Sbjct: 42  LLPDTFTFPSLLKACTSLQLLSFGLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHAR 101

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFDEM +R++V WT ++    + G F     +  +M+  G  P+      ++      G
Sbjct: 102 KVFDEMRDRDVVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLS-----G 156

Query: 160 ASEFGY--SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            SE      +H FAL    E +  V  S+LN Y K   V  A+ +F  +   D+  WN M
Sbjct: 157 ISEITQLQCLHAFALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTM 216

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G+A      E L ++  M  +G+  D+ TF  +L     + D ++GR +H  I+ +  
Sbjct: 217 ISGFAFVANMSEILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGF 276

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           +  + +  ALI MY+K    + +++V E + DKDV+ W  +  G        +   +F +
Sbjct: 277 DGDMHLRTALITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSE 336

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            + SGS  +    + ++  C +L   DLG  +    L  G+  +    +S I M+ +CG 
Sbjct: 337 MLHSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGH 396

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVE 456
           ++ +  +F+ ++ +++ +WN ++SG+  +      L  F  + +++  +V+  T   +++
Sbjct: 397 LDKSLILFERMNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQ 456

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C  +    +   IH  +I++    C  + ++L+  Y   G L+ +    N     D+ S
Sbjct: 457 ACSSAGALPVGRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVS 516

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           WG +++     G    A+ I+   +  G KP+  I   +L+SC+  G  Q+   I   ++
Sbjct: 517 WGTLIAGYGFHGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576

Query: 577 K-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           +  G        + V+D   +   ++ A   + ++F    + V   +I+  +H    +E 
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVLG-IILDASHANGKTEV 635

Query: 636 MEIFDKMKLANLQPSQA 652
            +I  +  +  L+P  A
Sbjct: 636 EDIICR-DMIELKPVDA 651



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 2/367 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  LR D      SLS+S  +    +G  +H  IV  GF  D+ L+  LI MY KCG   
Sbjct: 238 DDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEE 297

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              RV + + ++++V WT+++S  ++ G  +  L ++ +M  +G   +  A+ SV+  C 
Sbjct: 298 ASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCA 357

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G+ + G S+H + L+     +     S +  YAK G +  +  +F  ++  D+  WNA
Sbjct: 358 QLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNA 417

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           +I G+A  G   +AL +   M F+ +  +D  T ++ LQ CS      +GR IH ++IRS
Sbjct: 418 IISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRS 477

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +     +  AL+DMY K   ++ A + F  +  KDV+SW TL  G+  +        ++
Sbjct: 478 FIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIY 537

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCR 394
            +F+  G +PNHV F  +L  C     +  GL++   +    G        + ++ + CR
Sbjct: 538 SEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597

Query: 395 CGAVEMA 401
              VE A
Sbjct: 598 AKRVEDA 604


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 175/614 (28%), Positives = 303/614 (49%), Gaps = 48/614 (7%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY------------------------ 221
           +LN  +K G V  A ++F  +   D   WN MI  Y                        
Sbjct: 71  LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 130

Query: 222 -----AHCGYG--FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
                 +C +G   EA ++  SM  EG    ++T  + L+ CS +     G  IHG +++
Sbjct: 131 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 190

Query: 275 SEVECSISIVNALIDMYIKS---SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +  E ++ +V  L+DMY K    S  ++ FK  E    K+ + W  +  G+++N +  + 
Sbjct: 191 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE-FDRKNHVLWTAMVTGYAQNGDGYKA 249

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
              F      G   N  TF  +L  C  +L    G Q+    +  GF     V S+L+ M
Sbjct: 250 VEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDM 309

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +CG ++ A ++ + +   ++ +WN L+ G+  +  + + L+ F N+    ++++  TF
Sbjct: 310 YAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTF 369

Query: 452 FYVVETCCRSENQQMVGQI-----HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
             V+  C       +VG I     HG IIKTGF +   + ++L+  Y   G +D ++   
Sbjct: 370 PSVLNCC-------VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                 D+ SW ++++       + E++ IF  +   G  PD++I+ +IL++CA +   +
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLE 482

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K +H   IK G      V ++++  YAKCG +  A   F  S    DVI +  +I+ Y
Sbjct: 483 FGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIF-VSMQVKDVITWTAIIVGY 541

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
           A +G    +++ +D M  +  +P   TF+ ++ ACSH GLVD+G   F+ M+  YG++P 
Sbjct: 542 AQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPG 601

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           P+ Y C++D+  R+G L++AK +++ M  +P  TV++SLLS CR+H N EL E A+  L 
Sbjct: 602 PEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLF 661

Query: 747 LLLPKNDAAHVLLS 760
            L P N   +V+LS
Sbjct: 662 ELEPMNAMPYVMLS 675



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 248/477 (51%), Gaps = 21/477 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIVSAA 120
           G  +HG +VK GF  ++F+   L+ MY+KC        +F   E   +N V WT +V+  
Sbjct: 181 GEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGY 240

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG+    ++ +  M   G   N++   +++  C S+ A  FG  +H F +K     N 
Sbjct: 241 AQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNV 300

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  ++++ YAK GD+  A+ +  ++  DDV  WN+++ G+   G   EAL +  +M   
Sbjct: 301 YVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR 360

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            + +D YTF + L  C +V   +  + +HGLII++  E    + NAL+DMY K+  MD A
Sbjct: 361 NMKIDDYTFPSVLN-CCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCA 418

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           + VFE+M +KDVISW +L  G+++N +  ++  +F    ++G  P+    + +L  C +L
Sbjct: 419 YTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAEL 478

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G Q+    +  G    ++V +SL+ M+ +CG ++ A ++F ++  K++ TW  ++
Sbjct: 479 TLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAII 538

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC--------RSENQQMVGQIHG 472
            GY  N    + LK +  +  SG   +  TF  ++  C         R   QQM  +++G
Sbjct: 539 VGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM-NKVYG 597

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQ 527
             IK G     Y C  +I  +   G+LD + +  +  + + D   W +++SA  VH+
Sbjct: 598 --IKPGPEH--YAC--MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHE 648



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 286/635 (45%), Gaps = 45/635 (7%)

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE--- 125
           H         I+  N L+   SK G      ++FD+M +++  SW  ++S+ +  G    
Sbjct: 55  HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114

Query: 126 ----FD------------------------MGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
               FD                            ++  M+  G+  ++F +GSV++VC S
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG--CWN 215
           +G  + G  IH F +K   E N FV   +++ YAK   V+ AE +F  +  D      W 
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           AM+ GYA  G G++A+     M  +G+  ++YTF   L  CS V     G Q+HG I++S
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
               ++ + +AL+DMY K   +  A  + E M D DV+SWN+L  GF  +    +   LF
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLF 354

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
                   + +  TF  +L  C  ++       +  L +  GF + + V+++L+ M+ + 
Sbjct: 355 KNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKT 412

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G ++ A++VF+ +  K++ +W  L++GY  N    + LK FC++  +GV  +      ++
Sbjct: 413 GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASIL 472

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C      +   Q+H   IK+G      + +SL+  Y   G LD++       +  D+ 
Sbjct: 473 SACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVI 532

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W A++      G    ++  + ++V +G +PD      +L +C+  G     +     +
Sbjct: 533 TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQM 592

Query: 576 IKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            K+ G        + +ID + + G +  A+   DQ     D  V+ +L+ A   H    E
Sbjct: 593 NKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVH----E 648

Query: 635 AMEIFDK--MKLANLQPSQA---TFVSVMSACSHK 664
            +E+ ++    L  L+P  A     +S M + S K
Sbjct: 649 NLELAERAATNLFELEPMNAMPYVMLSNMYSASRK 683



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 4/374 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+   ++ +R  G QVHG IVK GF +++++Q+ L+ MY+KCG       + + M + ++
Sbjct: 272 LTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDV 331

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  ++   +++G  +  L+++ +M       +++   SV+  CV    S    S+H  
Sbjct: 332 VSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVV--GSINPKSVHGL 389

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K   E    V  ++++ YAK GD+  A  VF  +   DV  W +++ GYA      E+
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEES 449

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M   G+  D++   + L  C+ +   + G+Q+H   I+S +  S S+ N+L+ M
Sbjct: 450 LKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAM 509

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +D A  +F  M  KDVI+W  +  G+++N     +   +   + SG+RP+ +TF
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569

Query: 351 SILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
             LL  C     +D G +  Q +    G        + +I +F R G ++ A  + D + 
Sbjct: 570 IGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD 629

Query: 410 YK-NITTWNELLSG 422
            K + T W  LLS 
Sbjct: 630 VKPDATVWKSLLSA 643



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 2/264 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG I+K GF N   + N L+ MY+K G       VF++M E++++SWT +V+   QN  
Sbjct: 386 VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 445

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +  LK++ DM+  G  P++F V S++  C  +   EFG  +H   +K  +  +  V  S
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  YAK G +  A+ +F S+   DV  W A+I GYA  G G  +L    +M+  G   D
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVF 304
             TFI  L  CS     D GR+    + +   ++        +ID++ +S  +D A ++ 
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625

Query: 305 ERMADK-DVISWNTLFGGFSENKN 327
           ++M  K D   W +L      ++N
Sbjct: 626 DQMDVKPDATVWKSLLSACRVHEN 649



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 7/259 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D   +A  LS    L     G QVH   +K G      + N+L+AMY+KCG      
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  M  +++++WT I+    QNG+    LK Y  M ++G  P+      ++  C   G
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAG 580

Query: 160 ASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAM 217
             + G        K+  I+  P     +++ + + G +  A+++   +    D   W ++
Sbjct: 581 LVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSL 640

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI----I 273
           +          E     ++ LFE   M+   ++      S    ++   +I  L+    I
Sbjct: 641 LSA-CRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGI 699

Query: 274 RSEVECSISIVNALIDMYI 292
             E  CS   +N+ ++ +I
Sbjct: 700 VKEPGCSWLEINSRVNTFI 718


>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score =  295 bits (754), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 196/706 (27%), Positives = 336/706 (47%), Gaps = 35/706 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG   H  IV  G   D FL NNL+ +YSKCG   +  +VFD   ER+LV+W  I+ A 
Sbjct: 101 LLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAILGAY 160

Query: 121 I-----QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
                  +G    GL ++  ++ +        +  V+K+C +         +H +A+KI 
Sbjct: 161 ASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCLWAAKGVHGYAIKIG 220

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  + FV  +++N Y+K G +  A  +F  +   DV  WN M+ GY   G   EA  + S
Sbjct: 221 LVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 280

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                G+  D+++    L G   V + D G+  H   +++                    
Sbjct: 281 EFHRSGLXPDEFSVQLILNGVFEV-NXDEGKW-HADQVQA-------------------- 318

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILL 354
              Y  K+     + DV  WN      SE    G        F+ ++G    +   ++L 
Sbjct: 319 ---YXXKLSLSDDNXDVFCWNK---KLSEYLWAGDNWGAIECFVNMNGLNVXYDXVTLLE 372

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                   L++  Q+   AL    + +  V ++LI ++ R G +E A  +F N    ++ 
Sbjct: 373 VLAAVADGLNISRQIHVHALKTSNIADSFVATALIDVYSRSGKMEEAELLFQNKDDLDLA 432

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN ++ GY  +      L  F  I  SG + +  T     + C          QIH  +
Sbjct: 433 CWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIHAHV 492

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           IK GF S  Y+ S ++  Y+  G + N+    N     D  +W +M+S  V  G+  +A+
Sbjct: 493 IKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 552

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            I+H + ++G  PDEY   T++ + + + A ++ + +H  VIKL   ++ +V ++++D Y
Sbjct: 553 RIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 612

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG+I+     F +  N  +++++N +++  A HG   EA+ +F  MK   ++P + +F
Sbjct: 613 AKCGNIEDXYRLF-KKMNVRNIVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSF 671

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + ++SACS  GL  +    F SM +  G++P  + Y CLVD L   G +++   VIE MP
Sbjct: 672 IGILSACSLAGLTSEAYEYFHSMPNDCGIEPEIEHYSCLVDALGXAGLVQEXDKVIETMP 731

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F+ S ++ R+LL  CRI G+ E+G+  + +L  L P + AA+   S
Sbjct: 732 FKASASMNRALLGACRIQGDVEIGKRVAARLFALEPFDSAAYGFFS 777



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 243/559 (43%), Gaps = 34/559 (6%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  L L  N         VHG+ +K+G   D+F+   L+ +YSKCG       +FD M 
Sbjct: 193 LAPVLKLCSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMR 252

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ER++V W +++   +Q G      +++ +   +G  P+EF+V  ++     +   E  + 
Sbjct: 253 ERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFEVNXDEGKWH 312

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHC 224
                                       D   A     S+S D  DV CWN  +  Y   
Sbjct: 313 ---------------------------ADQVQAYXXKLSLSDDNXDVFCWNKKLSEYLWA 345

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSISI 283
           G  + A+    +M    +  D  T +  L   + VAD  +I RQIH   +++       +
Sbjct: 346 GDNWGAIECFVNMNGLNVXYDXVTLLEVL---AAVADGLNISRQIHVHALKTSNIADSFV 402

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             ALID+Y +S  M+ A  +F+   D D+  WN +  G+  + +  +   LF     SG 
Sbjct: 403 ATALIDVYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGE 462

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           + + +T +   + CG L+ LD G Q+    +  GF  +  V S ++ M+ +CG +  A  
Sbjct: 463 KSDQITLATAAKACGCLVLLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGI 522

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF+ +S  +   W  ++SG   N  +   L+ +  + +SGV  +  TF  +++       
Sbjct: 523 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTA 582

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   Q+H  +IK    S  ++ +SL+  Y   G +++ +         ++  W AM+  
Sbjct: 583 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVG 642

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNT 582
           +   G+  EAV +F S+   G +PD      IL++C+  G   +  +  H      G   
Sbjct: 643 IAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFHSMPNDCGIEP 702

Query: 583 EVYVASAVIDAYAKCGDIK 601
           E+   S ++DA    G ++
Sbjct: 703 EIEHYSCLVDALGXAGLVQ 721



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 140/597 (23%), Positives = 268/597 (44%), Gaps = 45/597 (7%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S+++  +S      G   H   +      + F+  ++L  Y+K G ++ A +VF +    
Sbjct: 89  SLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPER 148

Query: 210 DVGCWNAMIGGYAHC-----GYGFEALNVVSSMLFEGI-TMDKYTFINALQGCSLVADFD 263
           D+  WNA++G YA       G   E L++   +L E + +  + T    L+ CS      
Sbjct: 149 DLVTWNAILGAYASSVDSNDGNAQEGLHLFR-LLRESLGSTTRMTLAPVLKLCSNSXCLW 207

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
             + +HG  I+  +   + +   L+++Y K   M  A  +F+ M ++DV+ WN +  G+ 
Sbjct: 208 AAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLWNMMLKGYV 267

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL----QLQCLALHCGFL 379
           +     +   LF +F  SG  P+  +  ++L    + ++ D G     Q+Q         
Sbjct: 268 QLGLEKEAFQLFSEFHRSGLXPDEFSVQLILNGVFE-VNXDEGKWHADQVQAYXXKLSLS 326

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           D+         +FC                      WN+ LS Y +   +   ++ F N+
Sbjct: 327 DDNXD------VFC----------------------WNKKLSEYLWAGDNWGAIECFVNM 358

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
               V  +  T   V+       N  +  QIH   +KT   +  ++ ++LI  Y   G++
Sbjct: 359 NGLNVXYDXVTLLEVLAAVADGLN--ISRQIHVHALKTSNIADSFVATALIDVYSRSGKM 416

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           + +       + LD+A W AMM   +     ++A+ +F  +  +GEK D+  L T   +C
Sbjct: 417 EEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKAC 476

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
             +      K IH  VIK GF +++YV S ++D Y KCGD+  A + F+   ++ D + +
Sbjct: 477 GCLVLLDZGKQIHAHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNY-ISAPDDVAW 535

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
            ++I     +G   +A+ I+ +M+ + + P + TF +++ A S+   +++G  L  ++  
Sbjct: 536 TSMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTALEQGRQLHANV-I 594

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           +      P     LVDM ++ G +ED   + + M  + +  ++ ++L G   HGN E
Sbjct: 595 KLDCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVR-NIVLWNAMLVGIAQHGNAE 650



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 6/206 (2%)

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +F ++ T   + N  +    H  I+ +G +   ++ ++L+  Y   G L  + +  +   
Sbjct: 87  WFSLLRTAISTHNLLLGKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTP 146

Query: 511 RLDMASWGAMMSALV-----HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
             D+ +W A++ A       + G+  E + +F  L E+        L  +L  C+     
Sbjct: 147 ERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKLCSNSXCL 206

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
              K +H + IK+G   +V+V   +++ Y+KCG +  AR+ FD      DV+++N ++  
Sbjct: 207 WAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFD-GMRERDVVLWNMMLKG 265

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQ 651
           Y   GL  EA ++F +   + L P +
Sbjct: 266 YVQLGLEKEAFQLFSEFHRSGLXPDE 291


>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 836

 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 188/694 (27%), Positives = 345/694 (49%), Gaps = 6/694 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I ++GF +D+++   L+ MY K G      +VFD+M  +++V+W  +VS   Q
Sbjct: 119 GLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQ 178

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     L+++ DM ++    +  ++ +++     +  ++    +H   L I+       
Sbjct: 179 NGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLH--GLVIKKGFTSAF 236

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ Y K  D+ AAE VF  + S D   W  M+  YAH G   E L +   M    +
Sbjct: 237 SSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDV 296

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            M+K    +ALQ  + V + + G  IH   ++  +   IS+  +LI+MY K   ++ A +
Sbjct: 297 RMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQ 356

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F ++ D+DV+SW+ +   F +     +  SLF   + +  +PN VT + +L+ C  +  
Sbjct: 357 LFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAA 416

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             LG  + C A+      E    +++I M+ +CG        F+ +  K+   +N L  G
Sbjct: 417 SRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQG 476

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y      +     + N+   GV  +  T   +++TC    +      ++G IIK GF S 
Sbjct: 477 YTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSE 536

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            ++  +LI  +     L  +    +  G E+    SW  MM+  +  G   EA+  F  +
Sbjct: 537 CHVAHALIDMFTKCDALAAAKSLFDKCGFEK-STVSWNIMMNGYLLHGQAEEAIATFRQM 595

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                +P+      I+ + A + A     S+H  +I+ GF +   V ++++D YAKCG I
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMI 655

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + ++  F +  N N ++ +NT++ AYA HGL + A+ +F  M+   L+P   +F+SV+SA
Sbjct: 656 ESSKKCFIEIRNKN-MVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSA 714

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           C H GL ++G  +FK M+ ++ ++   + Y C+VD+L ++G  ++A  ++  M  + S  
Sbjct: 715 CRHAGLAEEGKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVG 774

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           V+ +LL+  R+H N  L   A  +L+ L P N +
Sbjct: 775 VWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPS 808



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 157/552 (28%), Positives = 264/552 (47%), Gaps = 5/552 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITM 244
           ++N Y+       + ++  S+    V  WN+MI GY   G   EAL V   M   +GI  
Sbjct: 39  LINAYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDP 98

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           DKYTF  AL+ C+   DF+ G +IH LI     E  + I  AL++MY K+  +  A +VF
Sbjct: 99  DKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVF 158

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M  KD+++WNT+  G ++N    +   LF     S    +HV+   L+    KL   D
Sbjct: 159 DKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKND 218

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +   L  L +  GF      +S LI M+C+C  +  A  VF+ V  K+ ++W  +++ Y 
Sbjct: 219 VCRCLHGLVIKKGFTSA--FSSGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYA 276

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N    +VL+ F  +    V +N       ++      N +    IH   ++ G  S   
Sbjct: 277 HNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDIS 336

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +SLI  Y   G+L+ + +     +  D+ SW AM+++    G + EA+++F  ++   
Sbjct: 337 VATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTH 396

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KP+   L ++L  CA + A +  KSIH + IK    +E+  A+AVI  YAKCG      
Sbjct: 397 FKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSPTL 456

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
            AF++     D I +N L   Y   G  S+A +++  MKL  + P   T V ++  C+  
Sbjct: 457 KAFER-LPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPDSGTMVGMLQTCALC 515

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
               +G  ++  +  ++G          L+DM ++   L  AK + +   F+ S   +  
Sbjct: 516 SDYARGSCVYGQI-IKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSWNI 574

Query: 725 LLSGCRIHGNKE 736
           +++G  +HG  E
Sbjct: 575 MMNGYLLHGQAE 586



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 163/671 (24%), Positives = 302/671 (45%), Gaps = 11/671 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+HG ++  G        N LI  YS         ++ D +    +V W  ++    + G
Sbjct: 23  QIHGSLIVAGLKP----HNQLINAYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAG 78

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                L+++  M +  G  P+++     +K C      E G  IH    ++  E + ++G
Sbjct: 79  LHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIG 138

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K GD+ +A +VF  +   D+  WN M+ G A  G   EAL +   M    + 
Sbjct: 139 TALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVD 198

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  +  N +   S +   D+ R +HGL+I+     + S  + LIDMY K + +  A  V
Sbjct: 199 IDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSAFS--SGLIDMYCKCADLYAAECV 256

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE +  KD  SW T+   ++ N +  +   LF        R N V  +  L+    + +L
Sbjct: 257 FEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGNL 316

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G+ +    +  G + + +V +SLI M+ +CG +E+A  +F  +  +++ +W+ +++ +
Sbjct: 317 EKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASF 376

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + L  F ++  +  + N  T   V++ C      ++   IH   IK    S  
Sbjct: 377 EQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESEL 436

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
              +++I  Y   G    + +        D  ++ A+       G   +A  ++ ++   
Sbjct: 437 ETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLH 496

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD   +  +L +CA    Y R   ++  +IK GF++E +VA A+ID + KC  +  A
Sbjct: 497 GVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAA 556

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  FD+       + +N ++  Y  HG   EA+  F +MK+   QP+  TFV+++ A + 
Sbjct: 557 KSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVRAAAE 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH-VIEIMPFQPSPTVY 722
              +  G  +  S+  Q+G          LVDM ++ G +E +K   IEI     +   +
Sbjct: 617 LAALSLGMSVHSSL-IQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIR--NKNMVSW 673

Query: 723 RSLLSGCRIHG 733
            ++LS    HG
Sbjct: 674 NTMLSAYAAHG 684



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 156/574 (27%), Positives = 272/574 (47%), Gaps = 9/574 (1%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           SF+  D + L   +     L+   +   +HG ++K GFT+     + LI MY KC     
Sbjct: 195 SFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSA--FSSGLIDMYCKCADLYA 252

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+E+  ++  SW  +++A   NG F+  L+++  M+      N+ A  S ++    
Sbjct: 253 AECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAY 312

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +G  E G +IH + ++  +  +  V  S++N Y+K G++  AE++F  I   DV  W+AM
Sbjct: 313 VGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAM 372

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  +   G   EAL++   M+      +  T  + LQGC+ VA   +G+ IH   I+++V
Sbjct: 373 IASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADV 432

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E  +    A+I MY K        K FER+  KD I++N L  G+++  +  +   ++  
Sbjct: 433 ESELETATAVISMYAKCGLFSPTLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKN 492

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             L G  P+  T   +L+ C    D   G  +    +  GF  E +V  +LI MF +C A
Sbjct: 493 MKLHGVCPDSGTMVGMLQTCALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDA 552

Query: 398 VEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           +  A S+FD   + K+  +WN +++GY  +    + + TF  +     + N  TF  +V 
Sbjct: 553 LAAAKSLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAIATFRQMKVEKFQPNAVTFVNIVR 612

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                    +   +H ++I+ GF S   + +SL+  Y   G +++S +        +M S
Sbjct: 613 AAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCFIEIRNKNMVS 672

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  M+SA    G  + AV++F S+ E   KPD     ++L++C   G  +  K I   + 
Sbjct: 673 WNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLAEEGKRIFKEM- 731

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
                 E +   A ++ YA   D+ G    FD++
Sbjct: 732 -----EERHKIEAKVEHYACMVDLLGKSGLFDEA 760



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 205/416 (49%), Gaps = 11/416 (2%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T +  L+ C    +F +  QIHG +I + ++      N LI+ Y      D + K+ + +
Sbjct: 7   TLLRMLRECK---NFRLLLQIHGSLIVAGLKPH----NQLINAYSLFQRPDLSRKIVDSV 59

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
               V+ WN++  G++      +   +F +     G  P+  TF+  L+ C   +D + G
Sbjct: 60  PYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKYTFTFALKACAGSMDFEEG 119

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
           L++  L    GF  +  + ++L+ M+C+ G +  A  VFD +  K+I TWN ++SG   N
Sbjct: 120 LRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKMPVKDIVTWNTMVSGLAQN 179

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
            C ++ L+ F ++  S V+++  + + ++    + E   +   +HG +IK GF+S     
Sbjct: 180 GCSSEALRLFRDMHSSFVDIDHVSLYNLIPAVSKLEKNDVCRCLHGLVIKKGFTSA--FS 237

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           S LI  Y     L  +          D +SWG MM+A  H G   E + +F  +     +
Sbjct: 238 SGLIDMYCKCADLYAAECVFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVR 297

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            ++    + L + A +G  ++  +IH + ++ G  +++ VA+++I+ Y+KCG+++ A   
Sbjct: 298 MNKVAAASALQAAAYVGNLEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQL 357

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           F +     DV+ ++ +I ++   G   EA+ +F  M   + +P+  T  SV+  C+
Sbjct: 358 FIK-IKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMRTHFKPNAVTLTSVLQGCA 412


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  295 bits (754), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 191/672 (28%), Positives = 327/672 (48%), Gaps = 16/672 (2%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++    ++G FD  + +Y+ M  +G    EF     ++K    +     G  IH   LK+
Sbjct: 79  VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            +  +  V  S+L  Y K G V  A ++F  +   D+  WN MI G+        +L   
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198

Query: 235 SSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
            SM++E GI  ++   ++++  CS +     GR+IHG++++S ++    +V++LI+MY+K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258

Query: 294 SSGMDYAFKVFERMADKDVIS-----WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
              +  A  +F  + DKD +      WN +  G+  N    Q   LF K ++ G +P++ 
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYS 318

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T   L   C + LD+  G Q+  L    G  +   V ++L+ M+ +CG +     +F   
Sbjct: 319 TMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRS 378

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMV 467
              N+  W+ ++S    + C    L+ F     E G+  +G      V   C S   +  
Sbjct: 379 QNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSG--ILVAVLRACSSLTLKPE 436

Query: 468 G-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           G QIHG   K GF S  ++ S+L+  Y     +  S +      + D+ SW A++S    
Sbjct: 437 GMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQ 496

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
                EA+  F  +     +P+   +  IL+ CA +      K +H ++I+ G  + V V
Sbjct: 497 DECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLV 556

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
           ++++I  YAKCGDI  +   F++    NDV  +N++I+    H    E + +FDKM  + 
Sbjct: 557 SNSLIATYAKCGDINSSLYTFEKMPERNDV-SWNSIILGMGMHSRTDEMIVLFDKMVASG 615

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           ++P   TF +++SACSH G VD+GC  FKSM   + ++P  + Y C+VD+L R G+L  A
Sbjct: 616 IKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQA 675

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS----KR 762
             +I  MP  P   ++ SLL  C+ HG++ L E  +  +  L+P +    VLL+      
Sbjct: 676 YDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENL 735

Query: 763 KRQREGNLLDHE 774
            + REG+ +  E
Sbjct: 736 GKGREGSKVRSE 747



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 278/576 (48%), Gaps = 9/576 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HGH++KLG  +D+ + N+L+ MY KCG     +++F++M E +LVSW  ++S   +
Sbjct: 128 GRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187

Query: 123 NGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + ++   L  +  M    G  PN  A  S +  C S+ +   G  IH   +K  ++   +
Sbjct: 188 SMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEY 247

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDD-----VGCWNAMIGGYAHCGYGFEALNVVSS 236
           +  S++  Y K G +  AE +F SI   D        WN MI GY   G   +AL +   
Sbjct: 248 LVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIK 307

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M+  GI  D  T ++    CS   D   G+QIHGLI +  ++ +I +  AL+DMY+K   
Sbjct: 308 MMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGD 367

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M    K+F R  + ++I W+ +    +++  P +   LF++F +     +      +LR 
Sbjct: 368 MGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRA 427

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L     G+Q+  LA   GF+ +  V S+L+ ++ +C  +  +  VF  +S K++ +W
Sbjct: 428 CSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSW 487

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N L+SGY  + C  + LK F ++    +  N  T   ++  C       +  ++HG +I+
Sbjct: 488 NALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIR 547

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            G  S   + +SLI +Y   G +++S + F    ER D+ SW +++  +       E + 
Sbjct: 548 QGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDV-SWNSIILGMGMHSRTDEMIV 606

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAY 594
           +F  +V +G KPD      IL++C+  G      K     V       ++   + ++D  
Sbjct: 607 LFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLL 666

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            + G +  A         + D  ++ +L+ +  +HG
Sbjct: 667 GRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHG 702



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 229/513 (44%), Gaps = 38/513 (7%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-----RNL 110
           +L+S   G ++HG +VK G   + +L ++LI MY KCG       +F+ + +     RN 
Sbjct: 223 SLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNA 282

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W +++S  + NG F   L +++ M   G  P+   + S+  +C       FG  IH  
Sbjct: 283 VIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGL 342

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             K  ++ N  V  ++L+ Y K GD+    ++F    + ++  W+A+I   A  G   +A
Sbjct: 343 IFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKA 402

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +      E    D    +  L+ CS +     G QIHGL  +      + + +AL+D+
Sbjct: 403 LELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDL 462

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   M Y+ KVF R++ KD++SWN L  G+++++   +    F    L   RPN VT 
Sbjct: 463 YAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTI 522

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L  + L  ++    +  G      V++SLI  + +CG +  +   F+ +  
Sbjct: 523 ACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPE 582

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +N  +WN ++ G   +    +++  F  +  SG++ +  TF  ++  C            
Sbjct: 583 RNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACS----------- 631

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H   +  G   C Y           F  +   F      E+     +  M+  L   GH 
Sbjct: 632 HAGRVDEG---CKY-----------FKSMVEDFNLKPQLEQ-----YTCMVDLLGRAGHL 672

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           ++A  +  ++      PD+ I G++L SC   G
Sbjct: 673 NQAYDLIMAMPCT---PDDRIWGSLLGSCKNHG 702


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 166/556 (29%), Positives = 292/556 (52%), Gaps = 16/556 (2%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D     + +Q  +       G+Q+H L+I +       + N L++MY K   +D+A K+F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M  ++++SW  +  G S+N    +    F    + G  P    FS  +R C  L  ++
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G Q+ CLAL  G   E  V S+L  M+ +CGA+  A  VF+ +  K+  +W  ++ GY 
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                 + L  F  + +  V ++       +  C   +  +    +H +++K GF S  +
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243

Query: 485 ICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           + ++L   Y   G ++++   F   +E  ++ S+  ++   V      + +++F  L   
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +P+E+   +++ +CA   A ++   +H  V+K+ F+ + +V+S ++D Y KCG ++ A
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 363

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             AFD+  +  + I +N+L+  +  HGL  +A++IF++M    ++P+  TF+S+++ CSH
Sbjct: 364 IQAFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G   F SMD  YG+ P  + Y C++D+L R G L++AK  I  MPF+P+   + 
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGN 769
           S L  CRIHG+KE+G+ A+EKL+ L PKN  A VLLS               R R R+GN
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542

Query: 770 LLDHEGVCNVNDGIKT 785
           +    G   V+ G KT
Sbjct: 543 VKKLPGYSWVDVGYKT 558



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 215/418 (51%), Gaps = 1/418 (0%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           +D   LA  +      K    G Q+H  ++  G+T   FL N+L+ MYSKCG     L++
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FD M +RNLVSWT ++S   QN +F   ++ +  M+  G +P +FA  S ++ C S+G+ 
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  +HC ALK  I    FVG ++ + Y+K G +  A +VF  +   D   W AMI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           +  G   EAL     M+ E +T+D++   + L  C  +     GR +H  +++   E  I
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            + NAL DMY K+  M+ A  VF   ++ ++V+S+  L  G+ E +   +  S+F +   
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  PN  TFS L++ C     L+ G QL    +   F ++  V+S L+ M+ +CG +E 
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 362

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A   FD +       WN L+S +  +    D +K F  + + GV+ N  TF  ++  C
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 420



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 116/222 (52%), Gaps = 1/222 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +  D   L  +L     LK+   G  VH  +VKLGF +DIF+ N L  MYSK G   
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 97  WGLRVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               VF   +E RN+VS+T ++   ++  + + GL ++V+++  G  PNEF   S++K C
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            +  A E G  +H   +KI  +++PFV   +++ Y K G +  A + F  I       WN
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWN 379

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +++  +   G G +A+ +   M+  G+  +  TFI+ L GCS
Sbjct: 380 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 421



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GTQ+H  ++K+ F  D F+ + L+ MY KCG     ++ FDE+ +   ++W  +VS   Q
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQ 387

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +G     +K++  M   G  PN     S++  C   G  E G
Sbjct: 388 HGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/666 (28%), Positives = 324/666 (48%), Gaps = 70/666 (10%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G   H   +    +   FV   ++  Y K  D+  A +VF  +   D   WNAM+ GYA 
Sbjct: 61  GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAG 120

Query: 224 CGYGFEALNVVSSM---------LFE------GITMDKYTFINALQGCSLVADFDIGRQI 268
            G    A  +  +M         LF+      G   D+ TF   L+ CS + D   G QI
Sbjct: 121 RGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQI 180

Query: 269 HGLIIRSEVECSISIVNALIDMY------------------------------------- 291
           HGL ++   +C +   +AL+DMY                                     
Sbjct: 181 HGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKT 240

Query: 292 -------IKSSGMDYAFK----------VFERMADKDVISWNTLFGGFSENKNPGQTASL 334
                  I ++ +D   K          +F  + + ++ S+N +  G++ +    +   +
Sbjct: 241 DFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGM 300

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F     SG   + V+ S   R C  +     GLQ+  L++         V ++++ M+ +
Sbjct: 301 FRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGK 360

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CGA+  A  VF+ +  ++  +WN +++ +  N  +   L  F  + +SG+E +  T+  V
Sbjct: 361 CGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSV 420

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           ++ C   +      +IH  IIK+      ++  +LI  Y   G ++ + +  +      +
Sbjct: 421 LKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV 480

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW A++S    Q  + EA   F  ++E G  PD +   TIL++CA +   +  K IH  
Sbjct: 481 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 540

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +IK    ++ Y++S ++D Y+KCG+++  ++ F+++ N  D + +N ++  YA HGL  E
Sbjct: 541 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPN-RDFVTWNAMVCGYAQHGLGEE 599

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A++IF+ M+L N++P+ ATF++V+ AC H GLV+KG   F SM S YG+ P  + Y C+V
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVV 659

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D++ R+G +  A  +IE MPF+    ++R+LLS C+IHGN E+ E A+  +L L P++ A
Sbjct: 660 DIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSA 719

Query: 755 AHVLLS 760
           A+VLLS
Sbjct: 720 AYVLLS 725



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 174/707 (24%), Positives = 300/707 (42%), Gaps = 82/707 (11%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K+   G Q H  ++   F   +F+ N LI MY KC   G+  +VFD M +R+ VSW  ++
Sbjct: 56  KALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAML 115

Query: 118 SAAIQNGEFDMGLKMYVDMKTNG-----------------FMPNEFAVGSVMKVCVSMGA 160
                 G+  +  K++  M   G                 F    FAV  V+K C S+  
Sbjct: 116 FGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAV--VLKSCSSLED 173

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL----GDVAAAERVFYSISSDDVGC--- 213
              G  IH  A+K+  + +   G ++L+ YAK      D+     +F  +    VG    
Sbjct: 174 HGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQL 233

Query: 214 -----------------------------------------------WNAMIGGYAHCGY 226
                                                          +NA+I GYA    
Sbjct: 234 HGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDK 293

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           G EAL +   +   G+ +D+ +   A + C+++     G Q+HGL ++S  + +I + NA
Sbjct: 294 GIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 353

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++DMY K   +  A  VFE M  +D +SWN +     +N N  +T SLF   + SG  P+
Sbjct: 354 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 413

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T+  +L+ C     L+ G+++    +      +  V  +LI M+ +CG +E A  + D
Sbjct: 414 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHD 473

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            ++ + + +WN ++SG+       +  KTF  + E GV+ +  T+  +++TC      ++
Sbjct: 474 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 533

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIH  IIK    S  YI S+L+  Y   G + +       A   D  +W AM+     
Sbjct: 534 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 593

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVY 585
            G   EA+ IF  +     KP+      +L +C  +G  ++     H  +   G + ++ 
Sbjct: 594 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 653

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             S V+D   + G +  A    +      D +++ TL+     HG V    E+ +K   +
Sbjct: 654 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNV----EVAEKAAYS 709

Query: 646 NLQ---PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            LQ      A +V + +  ++ G+ ++   L K M    G++  P C
Sbjct: 710 ILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFN-GLKKEPGC 755



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 196/386 (50%), Gaps = 2/386 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L  D + L+ +      +K  + G QVHG  +K    ++I + N ++ MY KCG    
Sbjct: 307 SGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE 366

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+EM  R+ VSW  I++A  QNG  +  L ++V M  +G  P+EF  GSV+K C  
Sbjct: 367 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 426

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
             A   G  IH   +K R+  + FVG ++++ Y+K G +  AE++   ++   V  WNA+
Sbjct: 427 WQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAI 486

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G++      EA    S ML  G+  D +T+   L  C+ +   ++G+QIH  II+ E+
Sbjct: 487 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 546

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           +    I + L+DMY K   M     +FE+  ++D ++WN +  G++++    +   +F  
Sbjct: 547 QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEY 606

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCG 396
             L   +PNH TF  +LR CG +  ++ GL     +  + G   +    S ++ +  R G
Sbjct: 607 MQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSG 666

Query: 397 AVEMAHSVFDNVSYK-NITTWNELLS 421
            V  A  + + + ++ +   W  LLS
Sbjct: 667 QVSKALELIEGMPFEADAVIWRTLLS 692



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 198/407 (48%), Gaps = 1/407 (0%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG-WGLRVFDEMAERNLV 111
             E  K+ V   Q+HGH +K  F  D+ +    + MY KC        ++F+ +   NL 
Sbjct: 220 FKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQ 279

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           S+  I+    ++ +    L M+  ++ +G   +E ++    + C  +     G  +H  +
Sbjct: 280 SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLS 339

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +K   + N  V  ++L+ Y K G +  A  VF  + S D   WNA+I  +   G   + L
Sbjct: 340 MKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 399

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   ML  G+  D++T+ + L+ C+     + G +IH  II+S +     +  ALIDMY
Sbjct: 400 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMY 459

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   M+ A K+ +R+A++ V+SWN +  GFS  K   +    F K +  G  P++ T++
Sbjct: 460 SKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYA 519

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L  C  L+ ++LG Q+    +      +  ++S+L+ M+ +CG ++    +F+    +
Sbjct: 520 TILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 579

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +  TWN ++ GY  +    + LK F  +    V+ N  TF  V+  C
Sbjct: 580 DFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 626



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 256/584 (43%), Gaps = 77/584 (13%)

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           F+ L +     ++     K TF +  Q CS       G+Q H  +I +E + ++ + N L
Sbjct: 24  FKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCL 83

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS------ 341
           I MYIK S + +AFKVF+ M  +D +SWN +  G++   + G    LF     +      
Sbjct: 84  IQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVE 143

Query: 342 ---------GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
                    G+  +  TF+++L+ C  L D   G+Q+  LA+  GF  +    S+L+ M+
Sbjct: 144 LFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMY 203

Query: 393 CRC----------------------GAVEM------------------------------ 400
            +C                      GA+++                              
Sbjct: 204 AKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 263

Query: 401 --AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             ++ +F+++   N+ ++N ++ GY  +    + L  F  + +SG+ ++  +       C
Sbjct: 264 DCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRAC 323

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASW 517
              +      Q+HG  +K+   S   + ++++  Y   G L +    F     R D  SW
Sbjct: 324 AVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSW 382

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            A+++A    G+  + +++F  ++++G +PDE+  G++L +CA   A      IH  +IK
Sbjct: 383 NAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK 442

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
                + +V  A+ID Y+KCG ++ A    D+      V+ +N +I  ++      EA +
Sbjct: 443 SRMGLDSFVGIALIDMYSKCGMMEKAEKLHDR-LAEQTVVSWNAIISGFSLQKQSEEAQK 501

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F KM    + P   T+ +++  C++   V+ G  +   +  +  +Q        LVDM 
Sbjct: 502 TFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE-LQSDAYISSTLVDMY 560

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           S+ G ++D + + E  P +   T + +++ G   HG   LGE A
Sbjct: 561 SKCGNMQDFQLIFEKAPNRDFVT-WNAMVCGYAQHG---LGEEA 600



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 108/493 (21%), Positives = 192/493 (38%), Gaps = 74/493 (15%)

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           ++K+P +T  +        +     TFS + ++C     L  G Q     +   F     
Sbjct: 19  QSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVF 78

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF------- 436
           VT+ LI M+ +C  +  A  VFD +  ++  +WN +L GY          K F       
Sbjct: 79  VTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138

Query: 437 CNIWE--------SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           C + E         G   +  TF  V+++C   E+     QIHG  +K GF       S+
Sbjct: 139 CGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 198

Query: 489 LIKSY----VNFGQLDNSFEFSN---------------------------GAERLDM--- 514
           L+  Y    V    L    E                              G   LDM   
Sbjct: 199 LLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMK 258

Query: 515 --------------------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
                                S+ A++          EA+ +F  L ++G   DE  L  
Sbjct: 259 CNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSG 318

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
              +CA I        +H   +K    + + VA+A++D Y KCG +  A + F++   S 
Sbjct: 319 AXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMV-SR 377

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D + +N +I A+  +G   + + +F  M  + ++P + T+ SV+ AC+    ++ G  + 
Sbjct: 378 DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 437

Query: 675 -KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            + + S+ G+         L+DM S+ G +E A+ + + +  Q +   + +++SG  +  
Sbjct: 438 NRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQ-TVVSWNAIISGFSLQK 494

Query: 734 NKELGEWASEKLL 746
             E  +    K+L
Sbjct: 495 QSEEAQKTFSKML 507


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  294 bits (753), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/599 (29%), Positives = 310/599 (51%), Gaps = 7/599 (1%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   LK   + + F+  +++N Y ++GD  +A ++F  +   +   W  +I GY   G  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD-IGRQIHGLIIRSEV-ECSISIVN 285
            +A  V+  M+FEG   +++ F +A++ C     +   GRQ+HG  IR+ + +  +++ N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            LI+MY K   +D+A  VF  M DKD +SWN++  G  +NK        ++    +G  P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           ++      L  C  L  + LG Q     +  G   + +V+++L+ ++     +     VF
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 406 DNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
             +  ++  +WN ++     +    ++ ++ F  +  +G   N  TF  ++ T       
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSA 523
           ++  QIH  I+K        I ++L+  Y   G+++N  E FS  +ER D  SW +M+S 
Sbjct: 323 KLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            +H     +A+ +   +++ G++ D +   T+L++CA +   +    +H   I+    ++
Sbjct: 383 YIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESD 442

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V + SA++D Y+KCG I  A   F+      ++  +N++I  YA HG    A+ +F +MK
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNL-MPVRNLYSWNSMISGYARHGHGDNALRLFTRMK 501

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           L+   P   TFV V+SACSH GLVD+G   FKSM   YG+ P  + Y C+VD+L R G L
Sbjct: 502 LSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGEL 561

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSG-CRIHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
           +  ++ I  MP +P+  ++R++L   CR +G K ELG  A+E L  + P+N   +VLLS
Sbjct: 562 DKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLS 620



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 288/602 (47%), Gaps = 13/602 (2%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H +++K GF +D+FL N LI +Y + G      ++FDEM +RN V+W  ++S   QNG  
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCV-SMGASEFGYSIHCFALKIRI-EKNPFVGC 184
           +    +  +M   GF+PN FA GS ++ C  SM     G  +H +A++  + +    VG 
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            ++N YAK GD+  A  VF  +   D   WN+MI G        +A+   +SM   G+  
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
             +  I+AL  C+ +    +G+Q HG  I+  ++  +S+ N L+ +Y ++S +    KVF
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 305 ERMADKDVISWNTLFGGFSEN-KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
             M ++D +SWNT+ G  +++  +  +   +F + + +G  PN VTF  LL     L   
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTS 322

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSG 422
            L  Q+  L L     D+  + ++L+  + + G +E    +F  +S  ++  +WN ++SG
Sbjct: 323 KLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISG 382

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N      +     + + G  ++  TF  V+  C      +   ++H   I+    S 
Sbjct: 383 YIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESD 442

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             I S+L+  Y   G++D +  F N     ++ SW +M+S     GH   A+ +F  +  
Sbjct: 443 VVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKL 502

Query: 543 AGEKPDEYILGTILNSCAAIG----AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +G+ PD      +L++C+ IG     ++  KS+       G    V   S ++D   + G
Sbjct: 503 SGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEV---YGLVPRVEHYSCMVDLLGRAG 559

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAH-HGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           ++       ++     +++++ T++ A    +G  +E      +M L N+ P  A    +
Sbjct: 560 ELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEM-LFNMDPQNAVNYVL 618

Query: 658 MS 659
           +S
Sbjct: 619 LS 620



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 216/425 (50%), Gaps = 3/425 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYF 95
           + FL     F +   +  E++  R  G QVHG+ ++ G  +  + + N LI MY+KCG  
Sbjct: 95  EGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDI 154

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VF  M +++ VSW  +++   QN  F+  +K Y  M+  G MP+ FA+ S +  C
Sbjct: 155 DHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSC 214

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S+G    G   H   +K+ ++ +  V  ++L  YA+   +A  ++VF  +   D   WN
Sbjct: 215 ASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWN 274

Query: 216 AMIGGYAHCGYGF-EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            +IG  A  G    EA+ V   M+  G + ++ TFIN L   S ++   +  QIH LI++
Sbjct: 275 TVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILK 334

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTAS 333
             V+   +I NAL+  Y KS  M+   ++F RM++ +D +SWN++  G+  N+   +   
Sbjct: 335 YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMD 394

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L    +  G R +  TF+ +L  C  +  L+ G+++   A+      +  + S+L+ M+ 
Sbjct: 395 LVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYS 454

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG ++ A   F+ +  +N+ +WN ++SGY  +    + L+ F  +  SG   +  TF  
Sbjct: 455 KCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVG 514

Query: 454 VVETC 458
           V+  C
Sbjct: 515 VLSAC 519



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 198/394 (50%), Gaps = 10/394 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  +LS   +L   +LG Q HG  +KLG   D+ + N L+A+Y++        +VF  M 
Sbjct: 207 LISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWML 266

Query: 107 ERNLVSWTLIVSAAIQNG-EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           ER+ VSW  ++ A   +G      ++++++M   G+ PN     +++    S+  S+  +
Sbjct: 267 ERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSH 326

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAH 223
            IH   LK  ++ +  +  ++L  Y K G++   E +F  +S   D+V  WN+MI GY H
Sbjct: 327 QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS-WNSMISGYIH 385

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                +A+++V  M+  G  +D +TF   L  C+ VA  + G ++H   IR+ +E  + I
Sbjct: 386 NELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVI 445

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            +AL+DMY K   +DYA + F  M  +++ SWN++  G++ + +      LF +  LSG 
Sbjct: 446 GSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQ 505

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            P+H+TF  +L  C  +  +D G +  + +    G +      S ++ +  R G ++   
Sbjct: 506 LPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIE 565

Query: 403 SVFDNVSYK-NITTWNELLSGYCFNCCDADVLKT 435
           +  + +  K NI  W  +L      CC  +  KT
Sbjct: 566 NFINKMPIKPNILIWRTVLGA----CCRGNGRKT 595


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 182/607 (29%), Positives = 306/607 (50%), Gaps = 8/607 (1%)

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S   + F   +H   +     ++ F+   ++N YA LGDV+ +   F  I   DV  WN+
Sbjct: 128 SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNS 187

Query: 217 MIGGYAHCGYGFEALNVVSSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           MI  Y H G+  EA+     +L    I  D YTF   L+ C  + D   GR+IH    + 
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKL 244

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             + ++ +  +LI MY +      A  +F+ M  +D+ SWN +  G  +N N  Q   + 
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +  L G + N VT   +L  C +L D+   + +    +  G   +  V+++LI M+ + 
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +E A   F  +   ++ +WN +++ Y  N         F  +  +G + +  T   + 
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424

Query: 456 ETCCRSENQQMVGQIHGAIIKTGF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
               +S + +    +HG I++ G+      I ++++  Y   G LD++ +        D+
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDV 484

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHP 573
            SW  +++     G   EA+ ++  + E  E  P++    +IL + A +GA Q+   IH 
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 544

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            VIK   + +V+VA+ +ID Y KCG +  A   F Q    + V  +N +I  +  HG   
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE 603

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           + +++F +M    ++P   TFVS++SACSH G V++G   F+ M  +YG++PS   YGC+
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCM 662

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R GYLE A   I+ MP QP  +++ +LL  CRIHGN ELG++AS++L  +  KN 
Sbjct: 663 VDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722

Query: 754 AAHVLLS 760
             +VLLS
Sbjct: 723 GYYVLLS 729



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 148/592 (25%), Positives = 273/592 (46%), Gaps = 30/592 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQ---------------------VHGHIVKLGFTNDI 79
           R+ PI L  +   S    S  LG Q                     +H  +V  G    I
Sbjct: 92  RRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSI 151

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK-MYVDMKT 138
           F+   L+ +Y+  G        FD++ ++++ +W  ++SA + NG F   +   Y  +  
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLV 211

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           +   P+ +    V+K C   G    G  IHC+A K+  + N FV  S+++ Y++ G    
Sbjct: 212 SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  +F  +   D+G WNAMI G    G   +AL+V+  M  EGI M+  T ++ L  C  
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D      IH  +I+  +E  + + NALI+MY K   ++ A K F++M   DV+SWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
              + +N +P      F K  L+G +P+ +T   L     +  D      +    +  G+
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448

Query: 379 LDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           L E+ V  ++++ M+ + G ++ AH VF+ +  K++ +WN L++GY  N   ++ ++ + 
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508

Query: 438 NIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            + E   +  N  T+  ++         Q   +IHG +IKT      ++ + LI  Y   
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+L ++        +    +W A++S     GH  + + +F  +++ G KPD     ++L
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           ++C+  G  +  K     + + G    +     ++D   + G ++   MA+D
Sbjct: 629 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLE---MAYD 677



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 223/474 (47%), Gaps = 19/474 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G ++H    KLGF  ++F+  +LI MYS+ G+ G    +FD+M  R++ SW  ++S  
Sbjct: 232 VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           IQNG     L +  +M+  G   N   V S++ VC  +G       IH + +K  +E + 
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  +++N YAK G++  A + F  +   DV  WN++I  Y        A      M   
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDY 299
           G   D  T ++     +   D    R +HG I+ R  +   + I NA++DMY K   +D 
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH-----KFILSGSRPNHVTFSILL 354
           A KVFE +  KDVISWNTL  G+++N    +   ++      K I+    PN  T+  +L
Sbjct: 472 AHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEII----PNQGTWVSIL 527

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  L  G+++    +      +  V + LI ++ +CG +  A S+F  V  ++  
Sbjct: 528 PAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV 587

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI 470
           TWN ++S +  +      LK F  + + GV+ +  TF  ++  C  S    E +     +
Sbjct: 588 TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 647

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
               IK      G +   L ++    G L+ +++F  +   + D + WGA++ A
Sbjct: 648 QEYGIKPSLKHYGCMVDLLGRA----GYLEMAYDFIKDMPLQPDASIWGALLGA 697


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 304/581 (52%), Gaps = 13/581 (2%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y K  ++  A ++F  +   ++  +N++I GY   G+  +A+ +      + + +DK+T
Sbjct: 92  MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFT 151

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +  AL  C    D D G+ +HGL++ + +   + ++N LIDMY K   +D A  +F+R  
Sbjct: 152 YAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCN 211

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           ++D +SWN+L  G+       +  +L  K   +G +        +L+ C   ++L+ GL 
Sbjct: 212 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKAC--CINLNEGLM 269

Query: 369 LQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            + +A+HC     G   +  V ++L+ M+ + G+++ A  +F  +  KN+ T+N ++SG+
Sbjct: 270 EKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGF 329

Query: 424 -----CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
                  +   ++  K F  +   G+E +  TF  V++ C  ++  +   QIH  I K  
Sbjct: 330 LQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 389

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  +I S+LI+ Y   G  ++  +      + D+ASW +++   V       A  +F 
Sbjct: 390 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFR 449

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            L  +  +P+EY +  ++++CA   A    + I  + IK G +    V ++ I  YAK G
Sbjct: 450 QLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSG 509

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           ++  A   F +  N  DV  Y+ +I + A HG   +A+ IF+ MK   ++P+Q  F+ V+
Sbjct: 510 NMPLANKVFIEVQNP-DVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVL 568

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            AC H GLV  G   F++M + YG+ P+   + CL D+L R G L DA+++I    FQ  
Sbjct: 569 IACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDH 628

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           P ++R+LLS CR++ +  +G+  +E+L+ L P+   ++VLL
Sbjct: 629 PVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 669



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/509 (25%), Positives = 241/509 (47%), Gaps = 8/509 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S VLG   HGH+VK      ++L NNL+ MY KC   G+  ++FD M ERN++S+  ++S
Sbjct: 63  SLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 122

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              Q G ++  ++++++ + +    ++F     +  C      +FG  +H   +   + +
Sbjct: 123 GYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQ 182

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
             F+   +++ Y+K G +  A  +F   +  D   WN++I GY   G   E LN+++ M 
Sbjct: 183 QVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 242

Query: 239 FEGITMDKYTFINALQGCSLVAD---FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
             G+ +  Y   + L+ C +  +    + G  IH    +  +E  I +  AL+DMY K+ 
Sbjct: 243 RAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNG 302

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS-----LFHKFILSGSRPNHVTF 350
            +  A K+F  M  K+V+++N +  GF +  +    AS     LF +    G  P+  TF
Sbjct: 303 SLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTF 362

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S++L+ C     L+ G Q+  L     F  +E + S+LI ++   G+ E     F + S 
Sbjct: 363 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 422

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++I +W  ++  +  N         F  ++ S +     T   ++  C          QI
Sbjct: 423 QDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQI 482

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            G  IK+G  +   + +S I  Y   G +  + +     +  D+A++ AM+S+L   G  
Sbjct: 483 QGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSA 542

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           H+A+ IF S+   G KP++     +L +C
Sbjct: 543 HDALNIFESMKTRGIKPNQQAFLGVLIAC 571



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 195/405 (48%), Gaps = 8/405 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG +V  G +  +FL N LI MYSKCG     + +FD   ER+ VSW  ++S  ++
Sbjct: 168 GKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVR 227

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---VSMGASEFGYSIHCFALKIRIEKN 179
            G  +  L +   M   G     +A+GSV+K C   ++ G  E G +IHC+A K+ +E +
Sbjct: 228 VGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFD 287

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-----YGFEALNVV 234
             V  ++L+ YAK G +  A ++F  + + +V  +NAMI G+            EA  + 
Sbjct: 288 IVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLF 347

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M   G+     TF   L+ CS     + GRQIH LI ++  +    I +ALI++Y   
Sbjct: 348 MEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 407

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
              +   + F   + +D+ SW ++     +N+       LF +   S  RP   T S+++
Sbjct: 408 GSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMM 467

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C     L  G Q+Q  A+  G     +V +S I M+ + G + +A+ VF  V   ++ 
Sbjct: 468 SACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVA 527

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           T++ ++S    +    D L  F ++   G++ N   F  V+  CC
Sbjct: 528 TYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACC 572



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/502 (22%), Positives = 237/502 (47%), Gaps = 25/502 (4%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K  F  A +  SLV    +G+  HG +++S +   + ++N L++MY K   + +A ++F+
Sbjct: 52  KKLFQTAAKSGSLV----LGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFD 107

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM ++++IS+N+L  G+++     Q   LF +      + +  T++  L  CG+  DLD 
Sbjct: 108 RMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDF 167

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  L  L +  G   +  + + LI M+ +CG ++ A S+FD  + ++  +WN L+SGY  
Sbjct: 168 GKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVR 227

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSC 482
                + L     +  +G+++       V++ CC + N+ ++ +   IH    K G    
Sbjct: 228 VGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFD 287

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH-----NHEAVTIF 537
             + ++L+  Y   G L  + +  +     ++ ++ AM+S  +         + EA  +F
Sbjct: 288 IVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLF 347

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +   G +P       +L +C+A    +  + IH  + K  F ++ ++ SA+I+ YA  
Sbjct: 348 MEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 407

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G  +     F  S +  D+  + ++I  +  +  +  A ++F ++  + ++P + T   +
Sbjct: 408 GSTEDGMQCF-ASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLM 466

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL----VDMLSRNGYLEDAKHV-IEI 712
           MSAC+    +  G  +       Y ++   D Y  +    + M +++G +  A  V IE+
Sbjct: 467 MSACADFAALSSGEQI-----QGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEV 521

Query: 713 MPFQPSPTVYRSLLSGCRIHGN 734
               P    Y +++S    HG+
Sbjct: 522 Q--NPDVATYSAMISSLAQHGS 541



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L   P   +  L      K+   G Q+H  I K  F +D F+ + LI +Y+  G    G+
Sbjct: 355 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 414

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F   +++++ SWT I+   +QN + +    ++  + ++   P E+ V  +M  C    
Sbjct: 415 QCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFA 474

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  I  +A+K  I+    V  S ++ YAK G++  A +VF  + + DV  ++AMI 
Sbjct: 475 ALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMIS 534

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A  G   +ALN+  SM   GI  ++  F+  L  C
Sbjct: 535 SLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIAC 571


>gi|302757275|ref|XP_002962061.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
 gi|300170720|gb|EFJ37321.1| hypothetical protein SELMODRAFT_76226 [Selaginella moellendorffii]
          Length = 847

 Score =  294 bits (752), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 192/727 (26%), Positives = 351/727 (48%), Gaps = 27/727 (3%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA---- 106
           LSL + + SR+     H   +KL     +     +I  Y++ G+      +F+ M     
Sbjct: 114 LSLGKTIHSRI-----HQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVL 168

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           + +L++WT +++A  Q G     L ++  M   G  P+ FA  + +  C S+ + E G  
Sbjct: 169 DPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTV 228

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   L   +E +  VG ++LNFYAK G V  +  +F S+   +V  W+A++  YA  G+
Sbjct: 229 LHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGH 288

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVEC-SIS 282
              A+ +   ML +G+  +K TF++ L  CS   L+ D   GR+IH  I++S      + 
Sbjct: 289 HEPAVELFREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVV 348

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  AL++MY +   +  A  VF+ M  +++ SWN +   +S N+   +    F   +L G
Sbjct: 349 VATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEG 408

Query: 343 S--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAV 398
              +P+ +TF      CG + DL   +++          ++ +V   S+LI M+  C  +
Sbjct: 409 EGVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRL 468

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  V D +   N+ +W  ++     N  +   ++ +  +   G + +  T   V++  
Sbjct: 469 ADAAQVLDQMPRTNVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAA 528

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMA 515
               + +   + H      GF++   + ++L+  Y   G L   +N F+        D+ 
Sbjct: 529 ANLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVV 588

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA--YQRTKSIHP 573
           +W +M+SA    G  ++A+  F  ++  G  PD+     ILN+CA   +   Q  K IH 
Sbjct: 589 TWNSMLSAWNQNGLPNQALGTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQGVK-IHA 647

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
                G ++++ VA+ ++  Y++CG++  AR  F  +    +V+ ++ +  A AH+G   
Sbjct: 648 LAAACGLDSDIDVANTLLHMYSRCGNLSRARKVF-HALTQKNVVSWSAMAAACAHNGDAD 706

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
            A++ F  M    +QP+  TF+S++S CSH GL+D+      +M S + ++P+   Y CL
Sbjct: 707 GALQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACL 766

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           +D+L+R G    A+   E+    P+P  + SLL  C +HG+ E    A++    L P + 
Sbjct: 767 LDLLARAGKFHRAE---ELATHLPNPVAWNSLLGACLVHGDAETAARAADTAAKLQPLDC 823

Query: 754 AAHVLLS 760
           A +V LS
Sbjct: 824 APYVSLS 830



 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 187/710 (26%), Positives = 349/710 (49%), Gaps = 29/710 (4%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L  + K+   G  VH  ++  G+  D +L N LI MY +C      + VF  ++ +N+
Sbjct: 2   LKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNV 61

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIH 168
            +WT+++ A   NG F   ++++ +M  +G   +EF   ++++ C ++G +    G +IH
Sbjct: 62  FTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIH 121

Query: 169 CFALK--IRIEKNPFVGCS--VLNFYAKLGDVAAA----ERVFYSISSDDVGCWNAMIGG 220
               +  +++  NP V CS  +++ YA+ G +  A    ER+   +   D+  W AM+  
Sbjct: 122 SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQVLDPDLIAWTAMMTA 181

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G+  EAL +   M  +G+  D++ F+ A+  CS +   + G  +H  ++ S VEC 
Sbjct: 182 YNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECD 241

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + NAL++ Y K+  +  +  +F  M  K+V++W+ +   +++N +      LF + +L
Sbjct: 242 GVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLL 301

Query: 341 SGSRPNHVTFSILLRQC---GKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMFCRCG 396
            G  PN VTF  LL  C   G + DL  G ++    L       +  V ++L+ M+ RCG
Sbjct: 302 DGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVNMYGRCG 361

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW--ESGVEVNGCTFFYV 454
           +V  A +VFD + ++NIT+WN +L  Y  N    + L+ F  +     GV+ +  TF   
Sbjct: 362 SVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAITFVSA 421

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAERL 512
            + C    +     +IH  I ++  S+   +   S+LIK Y N  +L ++ +  +   R 
Sbjct: 422 ADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRRLADAAQVLDQMPRT 481

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           ++ SW +M+ A      N  A+ ++ ++   G KPD   + T++ + A +   +R    H
Sbjct: 482 NVISWTSMILACEQNEDNEAAIRVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRGIEFH 541

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN--DVIVYNTLIMAYAHHG 630
                 GF T   V +A++  Y   GD++ A   F +    +  DV+ +N+++ A+  +G
Sbjct: 542 AQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAWNQNG 601

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL----FKSMDSQYGMQPS 686
           L ++A+  F +M      P + TFV++++AC+     D   LL      ++ +  G+   
Sbjct: 602 LPNQALGTFQRMLHHGRHPDKTTFVNILNACAG----DPSKLLQGVKIHALAAACGLDSD 657

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            D    L+ M SR G L  A+ V   +  Q +   + ++ + C  +G+ +
Sbjct: 658 IDVANTLLHMYSRCGNLSRARKVFHALT-QKNVVSWSAMAAACAHNGDAD 706



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 185/378 (48%), Gaps = 22/378 (5%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+  G   +LD G  +    +  G+  +  + + LI M+ RC +V  A +VF  VS KN
Sbjct: 1   MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR------SENQQM 466
           + TW  L+  +  N    + ++ F  +   GV+ +  TF  ++E C        S  + +
Sbjct: 61  VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120

Query: 467 VGQIHGAIIKTGFSSCGYICSS-LIKSYVNFGQLDNSFEFSNGAERL-------DMASWG 518
             +IH   +K   S+   ICS+ +I +Y   G ++ + E     ER+       D+ +W 
Sbjct: 121 HSRIHQQGLKLT-SNPTVICSTAMIDAYAQNGHIEQAAEIF---ERMQLQVLDPDLIAWT 176

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AMM+A    GH  EA+ +F  +   G +PD +     +++C++I + ++   +H  ++  
Sbjct: 177 AMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLAS 236

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               +  V +A+++ YAK G +  +R  F  S    +V+ ++ ++ AYA +G    A+E+
Sbjct: 237 SVECDGVVGNALLNFYAKAGLVHESRSLFS-SMKVKNVVTWSAIVAAYAQNGHHEPAVEL 295

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVD---KGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           F +M L  + P++ TFVS++ +CSH GL+    +G  +   +               LV+
Sbjct: 296 FREMLLDGVAPNKVTFVSLLFSCSHAGLIKDLARGRKIHAEILKSTAAAGDVVVATALVN 355

Query: 696 MLSRNGYLEDAKHVIEIM 713
           M  R G + DAK V + M
Sbjct: 356 MYGRCGSVSDAKTVFDEM 373


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 189/710 (26%), Positives = 353/710 (49%), Gaps = 18/710 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +VH   V  G +    +   L++ YS  G  G     F      +   W  ++       
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI----EKNP 180
           +F   L  +  M  +   P+ F V         +GA   G S+H + ++  +      + 
Sbjct: 90  DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG---YAHCGYGFEALNVVSSM 237
            V  S++  YA+ G V  A ++F  +   DV  W A++ G      CG G   L  +  +
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209

Query: 238 LFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
             +G    +  T  + L+ C ++ + + GR +HG  ++  V  S  +++AL  MY K   
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            + A  +F  + +KDV+SW +L G +       +   LF + + SG +P+ V  S LL  
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            G   ++  G     + +   F D   V ++LI M+ +   V+ A  VF  +  ++  +W
Sbjct: 330 LGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSW 389

Query: 417 NELLSGYCFNCCDADVLK-----TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           N ++ GYC   CD   L+      F + +E   + N  +    + +C R    ++    H
Sbjct: 390 NLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDAN--SLVSAISSCSRLVELRLGRSAH 447

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHN 530
              IK        + + LI  Y   G+ D++ + F     + D+ +W  ++S+  H GH+
Sbjct: 448 CYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHS 507

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           + AV+++  ++  G  P+   L T++++CA + A +R + IH +V ++G++ +V + +A+
Sbjct: 508 NTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTAL 567

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID YAKCG +  AR  FD S   +DV+ +N +I  Y  HG   +A+E+F KM+  +++P+
Sbjct: 568 IDMYAKCGQLGTARRIFD-SMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPN 626

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF++++SAC H GL+++G  LF  M  +Y ++P+   Y C+VD+L ++G+L++A+ ++
Sbjct: 627 GVTFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMV 685

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             MP +P   ++ +LLS C++H + E+G   ++K      +N+  ++L+S
Sbjct: 686 LAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILIS 735



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 192/403 (47%), Gaps = 4/403 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG+ VK+G  +   + + L +MYSKC        +F E+ E+++VSWT ++     
Sbjct: 238 GRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCW 297

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     ++++ +M  +G  P++  V  ++    + G    G + H   +K     N  V
Sbjct: 298 RGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLV 357

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y K   V  A RVF  +   D   WN MI GY   G   + L +   M F   
Sbjct: 358 GNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDT 417

Query: 243 ---TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
                D  + ++A+  CS + +  +GR  H   I+  ++   S+ N LI MY +    D+
Sbjct: 418 YEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDH 477

Query: 300 AFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
           A K+F     K DV++WNTL   ++   +     SL+ + +  G  PN  T   ++  C 
Sbjct: 478 ACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACA 537

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L+ L+ G ++       G+  + ++ ++LI M+ +CG +  A  +FD++   ++  WN 
Sbjct: 538 NLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNV 597

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           ++SGY  +      L+ F  +    ++ NG TF  ++  CC S
Sbjct: 598 MISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHS 640



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 163/337 (48%), Gaps = 4/337 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S L+ D + ++  LS   N  +   G   H  I+K  F +++ + N LI+MY K     
Sbjct: 313 ESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVD 372

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK---TNGFMPNEFAVGSVMK 153
              RVF  + +R+  SW L++    + G     L++Y +M+   T  F+ +  ++ S + 
Sbjct: 373 NAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAIS 432

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVG 212
            C  +     G S HC+++K  ++++  V   ++  Y + G    A ++F  +    DV 
Sbjct: 433 SCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVV 492

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN +I  YAH G+   A+++   ML EG+T +  T I  +  C+ +   + G +IH  +
Sbjct: 493 TWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYV 552

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
                +  +SI  ALIDMY K   +  A ++F+ M   DV++WN +  G+  +    Q  
Sbjct: 553 KEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQAL 612

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            LF K      +PN VTF  +L  C     L+ G QL
Sbjct: 613 ELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQL 649



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 126/279 (45%), Gaps = 2/279 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L  ++S    L    LG   H + +K     D  + N LI MY +CG F    ++F
Sbjct: 423 DANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIF 482

Query: 103 D-EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
                + ++V+W  ++S+    G  +  + +Y  M T G  PN   + +V+  C ++ A 
Sbjct: 483 GLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVAL 542

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  IH +  ++  + +  +  ++++ YAK G +  A R+F S+   DV  WN MI GY
Sbjct: 543 ERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGY 602

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G   +AL +   M    I  +  TF+  L  C      + GRQ+   + +  +E ++
Sbjct: 603 GMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPNL 662

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
                ++D+  KS  +  A  +   M  + D   W TL 
Sbjct: 663 KHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLL 701


>gi|302765755|ref|XP_002966298.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
 gi|300165718|gb|EFJ32325.1| hypothetical protein SELMODRAFT_61000 [Selaginella moellendorffii]
          Length = 644

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 189/608 (31%), Positives = 305/608 (50%), Gaps = 15/608 (2%)

Query: 162 EFGYSIHCFA--LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG-CWNAMI 218
           E G  IHC A  L +   K   VG ++L  Y + G + +A ++F S++ +  G CW  MI
Sbjct: 41  EAGERIHCVASCLNLVESKRKRVGVALLGMYVRCGSIESARKLFDSMAVERNGECWTVMI 100

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G+  EAL +    L EG+   + TFI  L  CS  A  D G+++H L+  +  +
Sbjct: 101 SAYVRRGWINEALLLFKKSLLEGVRPSEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQ 160

Query: 279 CSI--SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            SI  S+  +LI MY K   +D A+KV E++  +DV  W  +    S      +   L  
Sbjct: 161 ESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASLSHFGKLDRAFELLK 220

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           +  L G RP+ +TF  +LR C    +   +G  L  L    G   +  V +SL+ M+ R 
Sbjct: 221 RMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARW 280

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G  + A  VF  +  +++++WN LL+ Y         L  +  +   GV+ +  T   V+
Sbjct: 281 GDPQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVI 340

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           + C   ++ +   +IH  I  +GF+S   + ++LI  Y   G+LD + E        D  
Sbjct: 341 DVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDAALEIFEALPARDNV 400

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W  M+++L        A+  F  + + G  P    L T+L  C ++G     K +H  V
Sbjct: 401 TWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVG---EAKLVHSCV 457

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            + GF  +  V + +I AY +CG +  A   F+ +        +N ++ AYA  G    A
Sbjct: 458 RESGFEQDSEVKNTLITAYGRCGGLAQAVEIFE-ALPRKIESSWNAMMGAYAAQGKPRAA 516

Query: 636 MEIFDKM-KLANL-QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ-PSPDCYGC 692
           +E+F +M KL  + QP   T VSV+SACSH GL+ +G  +F S  S +G+Q  S + YGC
Sbjct: 517 LELFHRMVKLEQMIQP--ITLVSVLSACSHAGLLHRGLQIFASTASDFGVQWRSLELYGC 574

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
            +D+L R G L++A+ ++    F  S  ++ +LL   ++ G++E G+ A+ K+L L P N
Sbjct: 575 AIDLLGRAGQLQEAEMLVASSDFSGSSVLWITLLGASKVRGDEEAGKRAAVKVLELDPGN 634

Query: 753 DAAHVLLS 760
            AAHV+LS
Sbjct: 635 AAAHVILS 642



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/587 (24%), Positives = 263/587 (44%), Gaps = 23/587 (3%)

Query: 85  LIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
           L+ MY +CG      ++FD MA ERN   WT+++SA ++ G  +  L ++      G  P
Sbjct: 67  LLGMYVRCGSIESARKLFDSMAVERNGECWTVMISAYVRRGWINEALLLFKKSLLEGVRP 126

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN--PFVGCSVLNFYAKLGDVAAAER 201
           +E    +++  C    + + G  +H    +   +++  P +  S++  Y K G +  A +
Sbjct: 127 SEGTFIALLHACSRPASLDQGKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWK 186

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           V   I S DV  W  MI   +H G    A  ++  M  EG    K TF+  L+ C    D
Sbjct: 187 VMEKIESRDVELWTVMIASLSHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACK---D 243

Query: 262 FDIGRQI----HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
               RQ+    HGLI    +E  + +  +L++MY +      A +VF ++  +DV SWN 
Sbjct: 244 HPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDPQQAQEVFSQIEARDVSSWNC 303

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           L   +S      Q   L+ + +L G +P+ +T + ++  C  L DL+ G ++       G
Sbjct: 304 LLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSG 363

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           F  +  + ++LI  + RCG ++ A  +F+ +  ++  TWN +++    +      +  F 
Sbjct: 364 FASDLMLDTALITFYGRCGKLDAALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQ 423

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            + + G+  +  T   V+  C      ++V   H  + ++GF     + ++LI +Y   G
Sbjct: 424 RMQQEGMAPSRVTLLTVLGLCGSVGEAKLV---HSCVRESGFEQDSEVKNTLITAYGRCG 480

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            L  + E      R   +SW AMM A   QG    A+ +FH +V+  +      L ++L+
Sbjct: 481 GLAQAVEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMIQPITLVSVLS 540

Query: 558 SCAAIGAYQR-----TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
           +C+  G   R       +   F ++   + E+Y     ID   + G ++ A M    S  
Sbjct: 541 ACSHAGLLHRGLQIFASTASDFGVQW-RSLELY--GCAIDLLGRAGQLQEAEMLVASSDF 597

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           S   +++ TL+ A    G   E       +K+  L P  A    ++S
Sbjct: 598 SGSSVLWITLLGASKVRG--DEEAGKRAAVKVLELDPGNAAAHVILS 642



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 186/399 (46%), Gaps = 6/399 (1%)

Query: 63  GTQVHGHIVKLGFTNDIF--LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G ++H  + + GF   I   L  +LI MY KCG      +V +++  R++  WT+++++ 
Sbjct: 147 GKKLHRLLEEAGFQESIAPSLATSLIKMYGKCGSLDEAWKVMEKIESRDVELWTVMIASL 206

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG-ASEFGYSIHCFALKIRIEKN 179
              G+ D   ++   M   G  P++    +V++ C     A + G  +H    +  +E +
Sbjct: 207 SHFGKLDRAFELLKRMDLEGDRPSKMTFMAVLRACKDHPEARQVGGVLHGLIRERGLESD 266

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG S++N YA+ GD   A+ VF  I + DV  WN ++  Y+ C    +AL +   M+ 
Sbjct: 267 VGVGTSLVNMYARWGDPQQAQEVFSQIEARDVSSWNCLLAAYSRCSRQEQALVLYREMML 326

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG+  D+ T    +  C+ + D + G +IH  I  S     + +  ALI  Y +   +D 
Sbjct: 327 EGVKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDA 386

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++FE +  +D ++WNT+    +++ +P      F +    G  P+ VT   +L  CG 
Sbjct: 387 ALEIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGS 446

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           + +  L   +       GF  +  V ++LI  + RCG +  A  +F+ +  K  ++WN +
Sbjct: 447 VGEAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLAQAVEIFEALPRKIESSWNAM 503

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +  Y         L+ F  + +    +   T   V+  C
Sbjct: 504 MGAYAAQGKPRAALELFHRMVKLEQMIQPITLVSVLSAC 542



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 143/324 (44%), Gaps = 3/324 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+A   +  ++ ++R +G  +HG I + G  +D+ +  +L+ MY++ G       VF ++
Sbjct: 234 FMAVLRACKDHPEARQVGGVLHGLIRERGLESDVGVGTSLVNMYARWGDPQQAQEVFSQI 293

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R++ SW  +++A  +    +  L +Y +M   G  P+   + +V+ VC S+   E G 
Sbjct: 294 EARDVSSWNCLLAAYSRCSRQEQALVLYREMMLEGVKPDRLTLNTVIDVCASLKDLEQGS 353

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH          +  +  +++ FY + G + AA  +F ++ + D   WN MI       
Sbjct: 354 RIHQQIASSGFASDLMLDTALITFYGRCGKLDAALEIFEALPARDNVTWNTMIASLNDHS 413

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               A+     M  EG+   + T +  L  C  V +  +   +H  +  S  E    + N
Sbjct: 414 SPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVGEAKL---VHSCVRESGFEQDSEVKN 470

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            LI  Y +  G+  A ++FE +  K   SWN + G ++    P     LFH+ +      
Sbjct: 471 TLITAYGRCGGLAQAVEIFEALPRKIESSWNAMMGAYAAQGKPRAALELFHRMVKLEQMI 530

Query: 346 NHVTFSILLRQCGKLLDLDLGLQL 369
             +T   +L  C     L  GLQ+
Sbjct: 531 QPITLVSVLSACSHAGLLHRGLQI 554



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 3/229 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   + +  +LK    G+++H  I   GF +D+ L   LI  Y +CG     L
Sbjct: 329 VKPDRLTLNTVIDVCASLKDLEQGSRIHQQIASSGFASDLMLDTALITFYGRCGKLDAAL 388

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ +  R+ V+W  ++++   +   +  +  +  M+  G  P+   + +V+ +C S+G
Sbjct: 389 EIFEALPARDNVTWNTMIASLNDHSSPEAAMGFFQRMQQEGMAPSRVTLLTVLGLCGSVG 448

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            ++    +H    +   E++  V  +++  Y + G +A A  +F ++       WNAM+G
Sbjct: 449 EAKL---VHSCVRESGFEQDSEVKNTLITAYGRCGGLAQAVEIFEALPRKIESSWNAMMG 505

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            YA  G    AL +   M+     +   T ++ L  CS       G QI
Sbjct: 506 AYAAQGKPRAALELFHRMVKLEQMIQPITLVSVLSACSHAGLLHRGLQI 554


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 182/707 (25%), Positives = 351/707 (49%), Gaps = 14/707 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H      G ++       L++ YS  G  G+    F      +   W  ++ +     
Sbjct: 33  RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI---EKNPF 181
           +FD  L  +  M+ +G  P+ F           + A   G S+H +++K  +   + +  
Sbjct: 93  DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVA 152

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG---YAHCGYGFEAL-NVVSSM 237
           V  S++  YA+ G +  A ++F  +   DV  W A++ G      CG G   L  ++   
Sbjct: 153 VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLA 212

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G   +  T  + L+ C ++ +   GR +HG  ++  +     +V+AL  MY K    
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMT 272

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  +F  + +KDV+SW  L G +       +   LF +   SG +P+ V  S +L   
Sbjct: 273 EDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGL 332

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           G   +++ G     + +   F D   + +SLI M+ +   V++A +VF  +  ++  +W+
Sbjct: 333 GSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWS 392

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGC---TFFYVVETCCRSENQQMVGQIHGAI 474
            +++GYC    D   L+ +  +     +   C   +    + +C R    ++   +H   
Sbjct: 393 LMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYS 452

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEA 533
           IK        I +SLI  Y   G  + + + F+    R D+ +W A++S+  H G +++A
Sbjct: 453 IKCLLDE-NSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDA 511

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           ++++  ++    KP+   L T++++CA + A +  + +H +V  +G  ++V +++A++D 
Sbjct: 512 LSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDM 571

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y KCG +  AR  FD S    DV+ +N +I  Y  HG  ++A+++F +M+  +++P+  T
Sbjct: 572 YTKCGQLGTARGIFD-SMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLT 630

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F++++SAC H GLVD+G  LF  M   Y ++P+   Y C+VD+L ++G L++A+ ++  M
Sbjct: 631 FLAILSACCHAGLVDEGRKLFIRMGG-YRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAM 689

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P +P   V+ +LLS C++H N E+G   ++K     P+ND  ++L+S
Sbjct: 690 PIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMS 736



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 260/581 (44%), Gaps = 16/581 (2%)

Query: 62  LGTQVHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           +GT VH + VK G       + + ++L+ MY++CG  G  +++FDEM ER++V+WT +VS
Sbjct: 131 VGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVS 190

Query: 119 AAIQNGEFDMGLKMYVDM----KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
             ++NGE   G+   V M      +G  PN   + S ++ C  +G    G  +H +A+K 
Sbjct: 191 GCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKE 250

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            I     V  ++ + Y+K      A  +F  ++  DV  W  +IG Y   G   EA+ + 
Sbjct: 251 GIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELF 310

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M   G+  D+      L G    A+ + G+  H +IIR     S+ I N+LI MY K 
Sbjct: 311 QEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKF 370

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP---NHVTFS 351
             +D A  VF  +  +D  SW+ +  G+ +     +   L+ +           +  +  
Sbjct: 371 ELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLV 430

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY- 410
             +  C +L  L LG  + C ++ C  LDE ++T+SLI M+ RCG  E+A  +F      
Sbjct: 431 SAISSCSRLGRLRLGQSVHCYSIKC-LLDENSITNSLIGMYGRCGNFELACKIFAVAKLR 489

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +++ TWN L+S Y       D L  +  +    V+ N  T   V+  C      +    +
Sbjct: 490 RDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELL 549

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  +   G  S   I ++L+  Y   GQL  +    +   + D+ +W  M+S     G  
Sbjct: 550 HSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEA 609

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--S 588
           ++A+ +F  +     KP+      IL++C   G     + +  F+   G+  E  +   +
Sbjct: 610 NQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL--FIRMGGYRLEPNLKHYA 667

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            ++D   K G ++ A           D  V+ TL+ A   H
Sbjct: 668 CMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVH 708



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/503 (24%), Positives = 219/503 (43%), Gaps = 20/503 (3%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +   DS  R +   +   L     L     G  +HG+ VK G  +   + + L +MYSKC
Sbjct: 210 RLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKC 269

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                   +F E+ E+++VSWT ++ A  + G     ++++ +M+ +G  P+E  V  V+
Sbjct: 270 DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVL 329

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
               S      G + H   ++     +  +  S+++ Y K   V  A  VF  +   D  
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSML---FEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            W+ M+ GY   G   + L +   M     +    D  + ++A+  CS +    +G+ +H
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNP 328
              I+  ++   SI N+LI MY +    + A K+F      +DV++WN L   +S     
Sbjct: 450 CYSIKCLLD-ENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRS 508

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
               SL+ + +    +PN  T   ++  C  L  L+ G  L     + G   + +++++L
Sbjct: 509 NDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTAL 568

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ +CG +  A  +FD++  +++ TWN ++SGY  +      LK F  +    ++ N 
Sbjct: 569 VDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNS 628

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            TF  ++  CC +    +V +     I+ G    GY     +K Y     L         
Sbjct: 629 LTFLAILSACCHA---GLVDEGRKLFIRMG----GYRLEPNLKHYACMVDLLGKSGLLQE 681

Query: 509 AERL--------DMASWGAMMSA 523
           AE L        D   WG ++SA
Sbjct: 682 AEDLVLAMPIKPDGGVWGTLLSA 704


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 193/706 (27%), Positives = 341/706 (48%), Gaps = 12/706 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH HIV      +  L   +  MY++C  F   + +FD M +R    W +++   + 
Sbjct: 69  GRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLA 128

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  L++Y  M      P+       +  C  +     G SIH + +      N  +
Sbjct: 129 ADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRVATGRGINSSI 187

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  YA+ G +  A   F          WNA++   A  G+   A+ +   M  E  
Sbjct: 188 QSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQM--EQH 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDYAF 301
                +   AL  C+       G QIH  I +SE+    + ++NALI MY++   +D A 
Sbjct: 246 QCSDRSCAIALGACAAAGHLRGGIQIHDKI-QSEIHGTRVLVLNALISMYVRCGKLDEAL 304

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL---LRQCG 358
           +VF  M  ++V+SW ++    +++ +      LF   I  G  PN  T++ +   +   G
Sbjct: 305 RVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLG 364

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTW 416
           +   LD G ++       G   +  V +SLI M+ R G +  A  VFD++  + K + ++
Sbjct: 365 RDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSF 424

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++ Y  N      L+ F  +   GV  N  TF  V+  C    +      IH  +I+
Sbjct: 425 TTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIE 484

Query: 477 TGF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +G  SS  +  +SL+  Y   G L  +       +  D+ +W  +++A V  G+N  A+ 
Sbjct: 485 SGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALD 544

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           ++  ++++G  PD   L T+L +CA +G     + IH   ++     + +  +A+   YA
Sbjct: 545 LYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYA 604

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++ A   + +   S DV  + +++ A++  GL S A+E++ +M+   ++P++ TF+
Sbjct: 605 KCGSLEKATRLYRRCRGS-DVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFI 663

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+ +CS  GLV +G   F S+ S YG QPS + +GC+VD+L R G L DA+ +++ MPF
Sbjct: 664 PVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPF 723

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            P    ++SLLS C++H + E+G  A+E LL L P++ +  V LS+
Sbjct: 724 YPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELDPESTSQFVALSQ 769



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 218/473 (46%), Gaps = 15/473 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + N L+ C      D GR++H  I+   +  +  +   +  MY +    D A  +F+ M 
Sbjct: 53  YANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMP 112

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           D+    WN L   F     P  T  L+ +  +  ++P+   F   +  CG++ DL  G  
Sbjct: 113 DRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRS 172

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    +  G     ++ S+L+ M+ +CG +++A + FD+        WN ++S       
Sbjct: 173 IH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGH 231

Query: 429 DADVLKTFCNIWESGVEVNGCT-FFYVVETCCRSENQQMVG--QIHGAIIKTGFSSCGYI 485
               ++ F  +     E + C+     +     +    + G  QIH  I      +   +
Sbjct: 232 HRRAIELFFQM-----EQHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLV 286

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++LI  YV  G+LD +          ++ SW +M++A+   GH   AV +F  ++  G 
Sbjct: 287 LNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGI 346

Query: 546 KPDEYILGTILNSCAAIGA---YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            P+E    +++++ A +G      R + IH  +   G + +  V +++I+ YA+ G +  
Sbjct: 347 NPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAE 406

Query: 603 ARMAFDQSF-NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           AR  FD    NS  V+ + T+I AYAH+G   +A+EIF +M    + P++ TF +V++AC
Sbjct: 407 AREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAAC 466

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPS-PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              G +  G  + + M  + G+  S P  Y  LVDM ++ G L  A  V E M
Sbjct: 467 VAIGDLASGAWIHERM-IESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/528 (23%), Positives = 235/528 (44%), Gaps = 20/528 (3%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            ++++ C +  A + G  +H   +  R+ +N  +G  V   YA+      A  +F ++  
Sbjct: 54  ANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPD 113

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
               CWN ++  +       + L +   M  E        F+ A+  C  + D   GR I
Sbjct: 114 RRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSI 173

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  +       + SI +AL+ MY +   +D A   F+   +     WN +    +   + 
Sbjct: 174 HYRVATGR-GINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHH 232

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN----- 383
            +   LF  F +   + +  + +I L  C     L  G+Q     +H     E +     
Sbjct: 233 RRAIELF--FQMEQHQCSDRSCAIALGACAAAGHLRGGIQ-----IHDKIQSEIHGTRVL 285

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           V ++LI M+ RCG ++ A  VF ++ ++N+ +W  +++    +   +  +K F  +   G
Sbjct: 286 VLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEG 345

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           +  N  T+  VV          ++ +   IH  I  +G  +   + +SLI  Y   G L 
Sbjct: 346 INPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLA 405

Query: 501 NSFEFSNG--AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            + E  +        + S+  M++A  H GH  +A+ IF  +   G  P+E    T+L +
Sbjct: 406 EAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAA 465

Query: 559 CAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C AIG       IH  +I+ G + ++ +  ++++D YAKCGD+  A   F ++  + D++
Sbjct: 466 CVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVF-ETMKTKDLV 524

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            + T+I A    G    A++++D+M  + + P  AT  +++ AC++ G
Sbjct: 525 AWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLG 572



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 11/149 (7%)

Query: 30  GNNQFCSDSFLR-------KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           GNN+   D + R        D   L+  L    NL    +G ++H   ++     D   Q
Sbjct: 537 GNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQDAHFQ 596

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N L AMY+KCG      R++      ++ +WT +++A  Q G   + L++Y +M++ G  
Sbjct: 597 NALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVR 656

Query: 143 PNEFAVGSVMKVCVSMG----ASEFGYSI 167
           PNE     V+  C   G      EF +SI
Sbjct: 657 PNEVTFIPVLISCSQAGLVAEGREFFHSI 685


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  293 bits (751), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 314/631 (49%), Gaps = 4/631 (0%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L  Y  M       + +   S++K C  +     G ++H   L   +  + ++  S++NF
Sbjct: 46  LATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINF 105

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK G    A +VF  +   +V  W  +IG Y+  G   EA ++   M  +GI     T 
Sbjct: 106 YAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTV 165

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++ L G S +A       +HG  I       I++ N+++++Y K   ++Y+ K+F+ M  
Sbjct: 166 LSLLFGVSELAHVQC---LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDH 222

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +D++SWN+L   +++  N  +   L     L G      TF  +L       +L LG  L
Sbjct: 223 RDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCL 282

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
               L  GF  + +V +SLI ++ + G +++A  +F+  S K++  W  ++SG   N   
Sbjct: 283 HGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSA 342

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  F  + + GV+ +  T   V+  C +  +  +   I G I++          +SL
Sbjct: 343 DKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSL 402

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G LD S    +   R D+ SW AM++     G+  EA+ +F+ +    + PD 
Sbjct: 403 VTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDS 462

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             + ++L  CA+ G     K IH FVI+ G    + V ++++D Y KCGD+  A+  F+Q
Sbjct: 463 ITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQ 522

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
              S+D++ ++ +I+ Y +HG    A+  + K   + ++P+   F+SV+S+CSH GLV++
Sbjct: 523 -MPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQ 581

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +++SM   +G+ P  + + C+VD+LSR G +E+A +V +     P   V   +L  C
Sbjct: 582 GLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDAC 641

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           R +GN ELG+  +  +L+L P +    V L+
Sbjct: 642 RANGNNELGDTIANDILMLRPMDAGNFVQLA 672



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/553 (24%), Positives = 268/553 (48%), Gaps = 8/553 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  +H  I+  G + D ++ ++LI  Y+K G+     +VFD M ERN+V WT I+    
Sbjct: 79  LGLTLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYS 138

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKN 179
           + G       ++ +M+  G  P+   V S++      G SE  +   +H  A+      +
Sbjct: 139 RTGRVPEAFSLFDEMRRQGIQPSSVTVLSLL-----FGVSELAHVQCLHGCAILYGFMSD 193

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +  S+LN Y K G++  + ++F  +   D+  WN++I  YA  G   E L ++ +M  
Sbjct: 194 INLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRL 253

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G      TF + L   +   +  +GR +HG I+R+       +  +LI +Y+K   +D 
Sbjct: 254 QGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDI 313

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           AF++FER +DKDV+ W  +  G  +N +  +  ++F + +  G +P+  T + ++  C +
Sbjct: 314 AFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQ 373

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L   +LG  +    L      +    +SL+ M+ +CG ++ +  VFD ++ +++ +WN +
Sbjct: 374 LGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAM 433

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N    + L  F  +       +  T   +++ C  +    +   IH  +I+ G 
Sbjct: 434 VTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGL 493

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
             C  + +SL+  Y   G LD +    N     D+ SW A++    + G    A+  +  
Sbjct: 494 RPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSK 553

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCG 598
            +E+G KP+  I  ++L+SC+  G  ++  +I+  + K  G   ++   + V+D  ++ G
Sbjct: 554 FLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAG 613

Query: 599 DIKGARMAFDQSF 611
            ++ A   + + F
Sbjct: 614 RVEEAYNVYKKKF 626



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 265/527 (50%), Gaps = 16/527 (3%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           NA I  ++  G   + L   +SML   +  D YTF + L+ CS +  F +G  +H  I+ 
Sbjct: 30  NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S +     I ++LI+ Y K    D A KVF+ M +++V+ W T+ G +S      +  SL
Sbjct: 90  SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDEENVTSSLIYM 391
           F +    G +P+ VT   LL    +L        +QCL   A+  GF+ + N+++S++ +
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSEL------AHVQCLHGCAILYGFMSDINLSNSMLNV 203

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF--NCCDADVLKTFCNIWESGVEVNGC 449
           + +CG +E +  +FD + ++++ +WN L+S Y    N C  +VL     +   G E    
Sbjct: 204 YGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNIC--EVLLLLKTMRLQGFEAGPQ 261

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  V+         ++   +HG I++ GF    ++ +SLI  Y+  G++D +F     +
Sbjct: 262 TFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERS 321

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+  W AM+S LV  G   +A+ +F  +++ G KP    + +++ +CA +G+Y    
Sbjct: 322 SDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGT 381

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           SI  ++++     +V   ++++  YAKCG +  + + FD   N  D++ +N ++  YA +
Sbjct: 382 SILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDM-MNRRDLVSWNAMVTGYAQN 440

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G V EA+ +F++M+  N  P   T VS++  C+  G +  G  +  S   + G++P    
Sbjct: 441 GYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWI-HSFVIRNGLRPCILV 499

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
              LVDM  + G L+ A+     MP       + +++ G   HG  E
Sbjct: 500 DTSLVDMYCKCGDLDTAQRCFNQMPSH-DLVSWSAIIVGYGYHGKGE 545



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 229/500 (45%), Gaps = 37/500 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG  +  GF +DI L N+++ +Y KCG   +  ++FD M  R+LVSW  ++SA  Q G 
Sbjct: 181 LHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGN 240

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L +   M+  GF       GSV+ V  S G  + G  +H   L+     +  V  S
Sbjct: 241 ICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETS 300

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           ++  Y K G +  A R+F   S  DV  W AMI G    G   +AL V   ML  G+   
Sbjct: 301 LIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPS 360

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  + +  C+ +  +++G  I G I+R E+   ++  N+L+ MY K   +D +  VF+
Sbjct: 361 TATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFD 420

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  +D++SWN +  G+++N    +   LF++       P+ +T   LL+ C     L L
Sbjct: 421 MMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHL 480

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +    +  G      V +SL+ M+C+CG ++ A   F+ +   ++ +W+ ++ GY +
Sbjct: 481 GKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGY 540

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           +      L+ +    ESG++ N   F  V+ +C            H  +++ G +    I
Sbjct: 541 HGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCS-----------HNGLVEQGLN----I 585

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
             S+ K   +FG               D+     ++  L   G   EA  ++       +
Sbjct: 586 YESMTK---DFGIAP------------DLEHHACVVDLLSRAGRVEEAYNVYKK-----K 625

Query: 546 KPDEY--ILGTILNSCAAIG 563
            PD    +LG IL++C A G
Sbjct: 626 FPDPVLDVLGIILDACRANG 645



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 184/363 (50%), Gaps = 1/363 (0%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P      LS++ +     LG  +HG I++ GF  D  ++ +LI +Y K G      R+F+
Sbjct: 260 PQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFE 319

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
             +++++V WT ++S  +QNG  D  L ++  M   G  P+   + SV+  C  +G+   
Sbjct: 320 RSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNL 379

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G SI  + L+  +  +     S++  YAK G +  +  VF  ++  D+  WNAM+ GYA 
Sbjct: 380 GTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQ 439

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            GY  EAL + + M  +  T D  T ++ LQGC+      +G+ IH  +IR+ +   I +
Sbjct: 440 NGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILV 499

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             +L+DMY K   +D A + F +M   D++SW+ +  G+  +         + KF+ SG 
Sbjct: 500 DTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGM 559

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           +PNHV F  +L  C     ++ GL + + +    G   +    + ++ +  R G VE A+
Sbjct: 560 KPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAY 619

Query: 403 SVF 405
           +V+
Sbjct: 620 NVY 622



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 1/268 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A  ++    L S  LGT + G+I++     D+  QN+L+ MY+KCG+      VFD M 
Sbjct: 364 MASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMN 423

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+LVSW  +V+   QNG     L ++ +M+++   P+   + S+++ C S G    G  
Sbjct: 424 RRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKW 483

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH F ++  +     V  S+++ Y K GD+  A+R F  + S D+  W+A+I GY + G 
Sbjct: 484 IHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGK 543

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVN 285
           G  AL   S  L  G+  +   F++ L  CS     + G  I+  + +   +   +    
Sbjct: 544 GEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHA 603

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVI 313
            ++D+  ++  ++ A+ V+++     V+
Sbjct: 604 CVVDLLSRAGRVEEAYNVYKKKFPDPVL 631


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/647 (25%), Positives = 329/647 (50%), Gaps = 43/647 (6%)

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C+   + +   S+H   +K     + F+  ++++ Y+K   +  A  +F  +   ++ 
Sbjct: 11  RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIV 70

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGL 271
            W  M+    +     EAL++ + M+   I   +++ +   L+ C LV + ++G+ +H  
Sbjct: 71  SWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130

Query: 272 IIRSEVECSISIVNALIDMYIKSSGM-------------------------------DYA 300
           I +++++  I ++NAL+DMY+K   +                               D A
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPG--QTASLFHKFILSGSRPNHVTFSILLRQCG 358
            K+F++M + D++SWN++  G  +N +    +  S+ H     G + +  TF  +L+ CG
Sbjct: 191 MKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHG---KGLKMDEFTFPSVLKACG 247

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD----NVSY-KNI 413
              +L LG ++ C  +  GF       S+LI M+  C  +  A  +FD    N S  +++
Sbjct: 248 CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESL 307

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             WN +LSG+  N    + L    ++  SGV  +  TF  V++ C   +N  +  Q+HG 
Sbjct: 308 ALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGF 367

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +I +G+     + S LI  Y   G ++N+          D+ +W ++++     G +  A
Sbjct: 368 VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLA 427

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
            ++F  ++  G + D +++  +L +C+++ ++Q  K +H   +K G+ +E  V +A+ID 
Sbjct: 428 FSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDM 487

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCGDI+ A   F    +  D + + ++I+  A +G   EA+ +  KM  +  +P++ T
Sbjct: 488 YAKCGDIEDALSLFG-CLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKIT 546

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            + V++AC H GLV++   +F S+++ +G+ P P+ Y C+VD+L + G  E+A  +I  M
Sbjct: 547 ILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEM 606

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PF+P  T++ SLL  C  + N++L    +E LL   P++ + +++LS
Sbjct: 607 PFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLS 653



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 146/542 (26%), Positives = 255/542 (47%), Gaps = 36/542 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
              +H HI+K GF N IF+ NN+I++YSKC        +FDEM  RN+VSWT +VS    
Sbjct: 22  AKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTN 81

Query: 123 NGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +      L +Y +M  +    PN+F   +V+K C  +   E G  +H    + +++ +  
Sbjct: 82  SSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIV 141

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY--------------- 226
           +  ++L+ Y K G +  A+RVF  I   +   WN +I GYA  G                
Sbjct: 142 LMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPD 201

Query: 227 ---------------GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
                             AL  VS M  +G+ MD++TF + L+ C    +  +GR+IH  
Sbjct: 202 IVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCY 261

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-----WNTLFGGFSENK 326
           II+S  E S   ++ALIDMY     +  A K+F++      +S     WN++  G   N 
Sbjct: 262 IIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNG 321

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +  +  S+      SG R +  TFSI+L+ C    +L L  Q+    +  G+  +  V S
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGS 381

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            LI ++ + G++  A  +F+ +  K++  W+ L++G      D      F ++   G+++
Sbjct: 382 ILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQI 441

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +      V++ C    + Q   Q+H   +K G+ S G + ++LI  Y   G ++++    
Sbjct: 442 DHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLF 501

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                +D  SW +++      G   EA+++ H ++E+G KP++  +  +L +C   G  +
Sbjct: 502 GCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVE 561

Query: 567 RT 568
             
Sbjct: 562 EA 563



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 247/557 (44%), Gaps = 42/557 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF----------------GW-------- 97
           LG  VH HI +     DI L N L+ MY KCG                   W        
Sbjct: 123 LGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYA 182

Query: 98  -------GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
                   +++FD+M E ++VSW  I++  + N      L+    M   G   +EF   S
Sbjct: 183 KQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPS 241

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----YS 205
           V+K C        G  IHC+ +K   E + +   ++++ Y+    ++ A ++F      S
Sbjct: 242 VLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNS 301

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
             S+ +  WN+M+ G+   G   EAL+++S M   G+  D YTF   L+ C    +  + 
Sbjct: 302 SVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLA 361

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            Q+HG +I S  E    + + LID+Y K   ++ A ++FER+ DKDV++W++L  G +  
Sbjct: 362 SQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
            +     SLF   I  G + +H   SI+L+ C  L     G Q+  L L  G+  E  VT
Sbjct: 422 GSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVT 481

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++LI M+ +CG +E A S+F  +S  +  +W  ++ G   N    + +     + ESG +
Sbjct: 482 TALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTK 541

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAI-IKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
            N  T   V+  C  S   +    +  +I    G   C    + ++      G+ + + +
Sbjct: 542 PNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVK 601

Query: 505 F-SNGAERLDMASWGAMMSAL-VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
             S    + D   W +++ A   ++  +   +   H L  + E    YI+  + N  AA+
Sbjct: 602 LISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIM--LSNVYAAL 659

Query: 563 GAYQRTKSIHPFVIKLG 579
           G +     +   V K+G
Sbjct: 660 GMWDSVSKVRETVKKIG 676



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 182/431 (42%), Gaps = 45/431 (10%)

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           NH+   I  R C +   +     L    +  GF +   + +++I ++ +C ++  A ++F
Sbjct: 4   NHI--QIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE-VNGCTFFYVVETCCRSENQ 464
           D + ++NI +W  ++S    +    + L  +  + ES +E  N   +  V++ C    N 
Sbjct: 62  DEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNV 121

Query: 465 QMVGQIHGAIIKTG--------------FSSCGYI-----------------CSSLIKSY 493
           ++   +H  I +                +  CG +                  ++LI  Y
Sbjct: 122 ELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGY 181

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G +D++ +  +     D+ SW ++++ LV    +  A+     +   G K DE+   
Sbjct: 182 AKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNA-SSRALRFVSMMHGKGLKMDEFTFP 240

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L +C         + IH ++IK GF +  Y  SA+ID Y+ C  +  A   FDQ F +
Sbjct: 241 SVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRN 300

Query: 614 NDV----IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           + V     ++N+++  +  +G   EA+ +   M  + ++    TF  V+  C +    D 
Sbjct: 301 SSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMN---FDN 357

Query: 670 GCLLFKSMDSQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
             L  +            DC     L+D+ ++ G + +A  + E +P       + SL++
Sbjct: 358 LSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLIT 416

Query: 728 GCRIHGNKELG 738
           GC   G+ +L 
Sbjct: 417 GCARFGSDKLA 427



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 29/309 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   ++  L    +L S   G QVH   +K G+ ++  +   LI MY+KCG     L
Sbjct: 439 LQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDAL 498

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  ++E + +SWT I+    QNG  +  + +   M  +G  PN+  +  V+  C   G
Sbjct: 499 SLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSG 558

Query: 160 ASEFGYSIHCFALKIRIEKNP-FVGCS-----VLNFYAKLGDVAAAERVFYSIS-SDDVG 212
             E  + +        IE N   + C      +++   + G    A ++   +    D  
Sbjct: 559 LVEEAWDVFN-----SIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKT 613

Query: 213 CWNAMIGGYAHCGY--GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD------- 263
            W++++G    CG     +  N+V+  L      D   +I      + +  +D       
Sbjct: 614 IWSSLLGA---CGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRE 670

Query: 264 ----IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
               IG++  G I   E+      +  L   + K        KV   + + D++SWN + 
Sbjct: 671 TVKKIGKKRAGKIFY-EIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVI 729

Query: 320 GGFSENKNP 328
            G ++N +P
Sbjct: 730 AGLADNASP 738


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 187/711 (26%), Positives = 339/711 (47%), Gaps = 5/711 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H H+     +N       LI  Y++ G       VF+     +   W +++   + + 
Sbjct: 19  QLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSH 78

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F+  + +Y  M  N      F   SV++ C   G    G  +H   +K   + +PF+  
Sbjct: 79  AFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIET 138

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+L  Y +LG +  A +VF  I   D+  W+++I  Y   G   EAL +   ++ E + +
Sbjct: 139 SLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKL 198

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D    ++  + CS +    + + IHG I+R  V+   ++ N+LI+MY     +  A ++F
Sbjct: 199 DWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIF 258

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             MA+K  ISW ++   ++ +    +   +F K +     PN +T   +L+ C  L  L 
Sbjct: 259 VNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLR 318

Query: 365 LGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            G  + C AL  G   +++ +   LI ++  CG +     V   +  +N+ +WN LLS  
Sbjct: 319 EGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSIN 378

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + L  F  + + G+ ++  +    +  C    + Q+  QIHG  IK       
Sbjct: 379 ARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILG-E 437

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ ++LI  Y   G  D+++   N  ++    +W +++S  V  G++ EA+ +   +   
Sbjct: 438 FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLN 497

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             K  + +  + + +CA +   ++ K +H  +I  G   ++Y+ +A+ D YAKCGD++ A
Sbjct: 498 CLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTA 557

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F  S +   V+ ++ +I  Y  HG +  A+  F++M    ++P+  TF++++SACSH
Sbjct: 558 EGVF-HSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSH 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V++G   F  M   +G++PS + + CLVD+LSR G +  A  +I  MPF    +V  
Sbjct: 617 SGSVEQGKFYFDLM-RDFGVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLG 675

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHE 774
           +LL+GCRIH   ++     EK LL +  +D  H  L        GN    E
Sbjct: 676 NLLNGCRIHQRMDMIP-EIEKDLLKIRTSDTGHYSLLSNIYAEIGNWAARE 725



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 257/543 (47%), Gaps = 2/543 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG I+K GF ND F++ +L+ +Y + G      +VFD++  R+LVSW+ I+S+ +
Sbjct: 117 IGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYV 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             GE +  L+M+  +       +   + SV + C  +G  +   SIH + ++ R++    
Sbjct: 177 DKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEA 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S++  Y+   D+ +AER+F ++++     W +MI  Y   G+  EA  +   ML   
Sbjct: 237 LDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELK 296

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYA 300
           +  +  T +  L+ CS ++    G+ IH   ++  +      +   LI++Y     + Y 
Sbjct: 297 VEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYC 356

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KV   + +++V+SWNTL    +      +   LF +    G   +  + S  +  CG +
Sbjct: 357 EKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNV 416

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L LG Q+   A+    L  E V ++LI M+ RCG  + A+ +F+++  K+   WN ++
Sbjct: 417 GSLQLGRQIHGYAIKRCILG-EFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSII 475

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+  +    + +     ++ + +++    F   ++ C      +    +H  +I  G  
Sbjct: 476 SGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVE 535

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              YI ++L   Y   G L  +    +      + SW AM+S     G    A+T F+ +
Sbjct: 536 KDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQM 595

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           VE G KP+      IL++C+  G+ ++ K     +   G        + ++D  ++ GD+
Sbjct: 596 VELGIKPNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVEPSSEHFACLVDLLSRAGDV 655

Query: 601 KGA 603
            GA
Sbjct: 656 NGA 658



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
           C++  Q  + Q+H  +  T  S+     + LI+SY   G + +S       +  D   WG
Sbjct: 11  CKTLRQ--LNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWG 68

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++   V      EA+ ++  ++    +   ++  ++L +CA  G       +H  +IK 
Sbjct: 69  VLIKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKC 128

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF+ + ++ ++++  Y + G +  AR  FD      D++ ++++I +Y   G  +EA+E+
Sbjct: 129 GFDNDPFIETSLLGLYGELGCLTDARKVFDD-IPVRDLVSWSSIISSYVDKGEANEALEM 187

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLV 667
           F  +    ++      +SV  ACS  G++
Sbjct: 188 FRLLVNERVKLDWVIMLSVTEACSKLGIL 216


>gi|302815759|ref|XP_002989560.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
 gi|300142738|gb|EFJ09436.1| hypothetical protein SELMODRAFT_129917 [Selaginella moellendorffii]
          Length = 744

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 180/700 (25%), Positives = 336/700 (48%), Gaps = 12/700 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H   +      +  + N+LIAMY KC       R+F  +  ++ V+W  ++ A   
Sbjct: 29  GRQLHAAAIARRLDRETLVANSLIAMYGKCHSLAEAERLFHGLERKDPVTWNTMIGAFTH 88

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+  + + +Y  M +     N      V++ C ++G  + G ++           +  V
Sbjct: 89  NGQPRLAVDLYARMGSGD--RNSVTFLGVLEACSALGDLDLGRTVDSSIAGSEWRDDVVV 146

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G +V+  Y +   +  A + F S+   +V  WNA++  YA  G+   AL  +  M  +G 
Sbjct: 147 GTAVVGMYGRCRSIEDARQRFDSMPVKNVVSWNALVTSYARNGHPCGALRALREMDLDGT 206

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  TF+  ++  + +    +GR IH  + R        + NALI MY K   ++ + +
Sbjct: 207 KLNPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGDGGGTRLENALISMYGKLENLEESLR 266

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLL 361
           VFE MA+KDV+SW  +   +++N        L+ +  L    RP+ VT++ +L  C  L 
Sbjct: 267 VFEAMANKDVVSWTAMITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLG 326

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL  G ++        F  +  + +SL+ +  +C  +E A  VF+++S ++   +N +L+
Sbjct: 327 DLSTGKEIYARVCSSDFDVDAALKTSLVGLHGKCHCLEDAKEVFESISSRDRLAYNAMLA 386

Query: 422 GYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            Y  N    D L  +  + +  GVE    +F   +  C   ++      +HG I   G  
Sbjct: 387 AYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIK 446

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L+  Y   G L+ +          D+ S+ AM+ A    G    A+TI+  +
Sbjct: 447 LDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEM 506

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            + G KPDE    ++L++C++  A +    +H  ++  GF  +  + +A++  YAK G++
Sbjct: 507 DQQGIKPDEVAFISVLSACSSNLATE----VHTEILHAGFEADGALGTALVCMYAKSGNL 562

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + +R  F  +  S D + +  +I A+A HG   EA  +F  M L  +    +T  S++ +
Sbjct: 563 EESRRIFG-AMKSRDSVSWTAMISAFARHG--CEAKLLFQGMALDGIDAKGSTLTSMLVS 619

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
            S  G VD     F +M   +G  P+ + Y CLVD+L+R+G + +AK +++ MP +P   
Sbjct: 620 YSQSG-VDAARGFFMAMQGDFGTCPAAEHYSCLVDLLARSGRVGEAKELVDSMPLEPDFV 678

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +LL  C+ HG+ E  + A+  +L +   +  A+++ S
Sbjct: 679 PWMTLLGACKTHGDLEQAKSAARGVLEVDSHSPGAYLVSS 718



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/600 (23%), Positives = 279/600 (46%), Gaps = 11/600 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M+    +P+   + S +  C S G    G  +H  A+  R+++   V  S++  Y K   
Sbjct: 1   MEERRILPHRTTLVSAISACASSGNLARGRQLHAAAIARRLDRETLVANSLIAMYGKCHS 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +A AER+F+ +   D   WN MIG + H G    A+++ + M       +  TF+  L+ 
Sbjct: 61  LAEAERLFHGLERKDPVTWNTMIGAFTHNGQPRLAVDLYARM--GSGDRNSVTFLGVLEA 118

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           CS + D D+GR +   I  SE    + +  A++ MY +   ++ A + F+ M  K+V+SW
Sbjct: 119 CSALGDLDLGRTVDSSIAGSEWRDDVVVGTAVVGMYGRCRSIEDARQRFDSMPVKNVVSW 178

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L   ++ N +P        +  L G++ N VTF +++    +L  L LG  +      
Sbjct: 179 NALVTSYARNGHPCGALRALREMDLDGTKLNPVTFLLVIEVATQLGSLSLGRSIHLRVTR 238

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G      + ++LI M+ +   +E +  VF+ ++ K++ +W  +++ Y  N  +   L+ 
Sbjct: 239 GGDGGGTRLENALISMYGKLENLEESLRVFEAMANKDVVSWTAMITAYAQNGRERLALEL 298

Query: 436 FCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
           +  +  E  V  +  T+  V+  C    +     +I+  +  + F     + +SL+  + 
Sbjct: 299 YRRMELEKRVRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLHG 358

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILG 553
               L+++ E        D  ++ AM++A    GH  +A+ ++  +++  G +P +    
Sbjct: 359 KCHCLEDAKEVFESISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFA 418

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
             L +C A+      KS+H  +   G   +  +A+ ++  Y + G ++ A   F+Q    
Sbjct: 419 VALMACTALKDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQ-MPV 477

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            DV  Y+ +I AY+ +G    AM I+ +M    ++P +  F+SV+SACS     +    +
Sbjct: 478 KDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACSSNLATEVHTEI 537

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
             +     G +        LV M +++G LE+++ +   M  + S + + +++S    HG
Sbjct: 538 LHA-----GFEADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVS-WTAMISAFARHG 591



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/547 (24%), Positives = 249/547 (45%), Gaps = 25/547 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P+     + ++  L S  LG  +H  + + G      L+N LI+MY K       LRVF
Sbjct: 209 NPVTFLLVIEVATQLGSLSLGRSIHLRVTRGGDGGGTRLENALISMYGKLENLEESLRVF 268

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGAS 161
           + MA +++VSWT +++A  QNG   + L++Y  M+      P+     +V+  C  +G  
Sbjct: 269 EAMANKDVVSWTAMITAYAQNGRERLALELYRRMELEKRVRPDRVTYAAVLGACSGLGDL 328

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  I+        + +  +  S++  + K   +  A+ VF SISS D   +NAM+  Y
Sbjct: 329 STGKEIYARVCSSDFDVDAALKTSLVGLHGKCHCLEDAKEVFESISSRDRLAYNAMLAAY 388

Query: 222 AHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           A  G+  +ALN+   M+  EG+     +F  AL  C+ + D   G+ +HG I  + ++  
Sbjct: 389 AQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTALKDLVTGKSLHGRIQVAGIKLD 448

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             +   L+  Y +   ++ A ++FE+M  KDV S++ + G +S+N   G+  +++ +   
Sbjct: 449 EVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMIGAYSQNGCEGRAMTIYAEMDQ 508

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+ V F  +L  C      +L  ++    LH GF  +  + ++L+ M+ + G +E 
Sbjct: 509 QGIKPDEVAFISVLSACSS----NLATEVHTEILHAGFEADGALGTALVCMYAKSGNLEE 564

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  +F  +  ++  +W  ++S +  + C+A +L  F  +   G++  G T   ++     
Sbjct: 565 SRRIFGAMKSRDSVSWTAMISAFARHGCEAKLL--FQGMALDGIDAKGSTLTSMLV---- 618

Query: 461 SENQQMVGQIHG--AIIKTGFSSCG----YICSSLIKSYVNFGQLDNSFEFSNGAE-RLD 513
           S +Q  V    G    ++  F +C     Y C  L+      G++  + E  +      D
Sbjct: 619 SYSQSGVDAARGFFMAMQGDFGTCPAAEHYSC--LVDLLARSGRVGEAKELVDSMPLEPD 676

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
              W  ++ A    G   +A +    ++E     D +  G  L S      + RT+    
Sbjct: 677 FVPWMTLLGACKTHGDLEQAKSAARGVLEV----DSHSPGAYLVSSTLCSGWARTRGTKL 732

Query: 574 FVIKLGF 580
              KL F
Sbjct: 733 ETPKLPF 739



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 176/399 (44%), Gaps = 11/399 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +  A  L     L     G +++  +    F  D  L+ +L+ ++ KC       
Sbjct: 308 VRPDRVTYAAVLGACSGLGDLSTGKEIYARVCSSDFDVDAALKTSLVGLHGKCHCLEDAK 367

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSM 158
            VF+ ++ R+ +++  +++A  QNG  D  L +Y   M   G  P + +    +  C ++
Sbjct: 368 EVFESISSRDRLAYNAMLAAYAQNGHPDDALNLYRQMMDLEGVEPTDTSFAVALMACTAL 427

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G S+H       I+ +  +  +++ FY ++G +  AER+F  +   DV  ++AMI
Sbjct: 428 KDLVTGKSLHGRIQVAGIKLDEVLATTLVGFYGEVGSLEEAERIFEQMPVKDVFSYSAMI 487

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G Y+  G    A+ + + M  +GI  D+  FI+ L  CS     ++  ++H  I+ +  E
Sbjct: 488 GAYSQNGCEGRAMTIYAEMDQQGIKPDEVAFISVLSACS----SNLATEVHTEILHAGFE 543

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              ++  AL+ MY KS  ++ + ++F  M  +D +SW  +   F+  ++  +   LF   
Sbjct: 544 ADGALGTALVCMYAKSGNLEESRRIFGAMKSRDSVSWTAMISAFA--RHGCEAKLLFQGM 601

Query: 339 ILSGSRPNHVTF-SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            L G      T  S+L+      +D   G     +    G        S L+ +  R G 
Sbjct: 602 ALDGIDAKGSTLTSMLVSYSQSGVDAARGF-FMAMQGDFGTCPAAEHYSCLVDLLARSGR 660

Query: 398 VEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKT 435
           V  A  + D++  + +   W  LL G C    D +  K+
Sbjct: 661 VGEAKELVDSMPLEPDFVPWMTLL-GACKTHGDLEQAKS 698


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 186/655 (28%), Positives = 324/655 (49%), Gaps = 12/655 (1%)

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
             WT+  S   Q G     L  ++D  +  G      A+  ++K+C S+     G  +H 
Sbjct: 21  TPWTMPFSTTWQ-GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHA 79

Query: 170 FALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             ++   +     VG S+++ Y     V    +VF  +   +V  W +++ GY   G   
Sbjct: 80  LCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLL 139

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           + +++   M  EG+  + +TF + L   +     D+G+ +H   I+     ++ + N+L+
Sbjct: 140 DVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLM 199

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY K   ++ A  VF RM  +D++SWNTL  G   N    +   LFH    S +     
Sbjct: 200 NMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTES 259

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T+S ++  C  L  L L  QL    L  GF    NV ++L+  + + G ++ A  VF  +
Sbjct: 260 TYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLM 319

Query: 409 S-YKNITTWNELLSGYCFNCCDADVLKT-FCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           S  +N+ +W  ++ G C    D  +    F  + E GV  N  T+  ++           
Sbjct: 320 SGSQNVVSWTAMIDG-CIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTV----SEASF 374

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             QIH  +IKT +     + ++L+ SY      + +       ++ D+ SW AM++    
Sbjct: 375 PPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQ 434

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVY 585
            G  + A   F  +   G KP+E+ + + +++CA+  A     +  H   IK   +  + 
Sbjct: 435 AGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALC 494

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V+SA++  YA+ G I+ A+  F++  +  D++ +N+++  YA HG   +A+++F +M++ 
Sbjct: 495 VSSALVSMYARKGSIENAQCVFERQTD-RDLLSWNSMLSGYAQHGYSQKALDVFRQMEVE 553

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            +     TF+SV+  C+H GLV++G   F  M   YG+ P+ D Y C+VD+ SR G L++
Sbjct: 554 GIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDE 613

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              +IE MPF   PT++R+LL  CR+H N ELG+ A+EKLL L P + A +VLLS
Sbjct: 614 TMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLS 668



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 250/550 (45%), Gaps = 10/550 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           ++  RVLG Q+H   V+ G  + DI +  +L+ MY        G +VF+ M +RN+V+WT
Sbjct: 67  SVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWT 126

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +++  IQ G     + ++  M+  G  PN F   SV+ +  S G  + G  +H  ++K 
Sbjct: 127 SLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKF 186

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
                 FV  S++N YAK G V  A  VF  + + D+  WN ++ G    G   EAL + 
Sbjct: 187 GCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLF 246

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
                    + + T+   +  C+ +    + RQ+H  +++       +++ AL+D Y K+
Sbjct: 247 HDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKA 306

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
             +D A  VF  M+  ++V+SW  +  G  +N +    A+LF +    G  PN +T+S +
Sbjct: 307 GQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTI 366

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L     + +     Q+    +   +     V ++L+  + +  + E A S+F  +  K++
Sbjct: 367 L----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDV 422

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHG 472
            +W+ +L+ Y            F  +   G++ N  T    ++ C        +G Q H 
Sbjct: 423 VSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHA 482

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNH 531
             IK        + S+L+  Y   G ++N+   F    +R D+ SW +M+S     G++ 
Sbjct: 483 ISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDR-DLLSWNSMLSGYAQHGYSQ 541

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAV 590
           +A+ +F  +   G   D     +++  CA  G  +  +     +++  G    +   + +
Sbjct: 542 KALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACM 601

Query: 591 IDAYAKCGDI 600
           +D Y++ G +
Sbjct: 602 VDLYSRAGKL 611



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 221/475 (46%), Gaps = 19/475 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P   +  LS+  +     LG  VH   +K G  + +F+ N+L+ MY+KCG       VF
Sbjct: 156 NPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF 215

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R++VSW  +++  + NG     L+++ D +++  M  E    +V+ +C ++    
Sbjct: 216 CRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLG 275

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGY 221
               +H   LK        V  ++++ Y K G +  A  VF  +S S +V  W AMI G 
Sbjct: 276 LARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGC 335

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G    A  + S M  +G+  +  T+   L     V++     QIH  +I++  EC+ 
Sbjct: 336 IQNGDIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTP 391

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           ++  AL+  Y K    + A  +F+ +  KDV+SW+ +   +++  +     + F K  + 
Sbjct: 392 TVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMH 451

Query: 342 GSRPNHVTFSILLRQCG-KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           G +PN  T S  +  C      +DLG Q   +++     D   V+S+L+ M+ R G++E 
Sbjct: 452 GLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIEN 511

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF+  + +++ +WN +LSGY  +      L  F  +   G++++G TF  V+  C  
Sbjct: 512 AQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAH 571

Query: 461 S----ENQQ---MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
           +    E QQ   ++ + +G        +C      ++  Y   G+LD +     G
Sbjct: 572 AGLVEEGQQYFDLMVRDYGITPTMDHYAC------MVDLYSRAGKLDETMSLIEG 620


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 178/589 (30%), Positives = 304/589 (51%), Gaps = 9/589 (1%)

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           +I+ N F+   ++N YA LGDV+ +   F  I   DV  WN+MI  Y   G+  EA++  
Sbjct: 104 KIQSN-FISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCF 162

Query: 235 SSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             +L       D YTF   L+ C  + D   GR+IH  + +   +  + +  +LI MY +
Sbjct: 163 YQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSR 219

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  A  +F+ M  +D+ SWN +  G  +N N  Q   +  +  L G   + VT + +
Sbjct: 220 FGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASI 279

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C +L D+     +    +  G   E  V+++LI M+ + G +  A  VF  +  +++
Sbjct: 280 LPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDV 339

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +++ Y  N         F  +  +G+E +  T   +     +S + +    +HG 
Sbjct: 340 VSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGF 399

Query: 474 IIKTGF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           I++ G+      I ++++  Y   G +D++ +  N     D+ SW  ++S     G   E
Sbjct: 400 IMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASE 459

Query: 533 AVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           A+ ++  + E  E K ++    +IL + A +GA Q+   IH  +IK   + +V+V + +I
Sbjct: 460 AIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLI 519

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG +  A   F Q    + V  +N +I  +  HG   +A+++F +M+   ++P  
Sbjct: 520 DLYGKCGRLVDAMCLFYQVPRESSV-PWNAIISCHGIHGHGEKALKLFREMQDEGVKPDH 578

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF+S++SACSH GLVD+G   F  M  +YG++PS   YGC+VD+L R G+LE A   I+
Sbjct: 579 VTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIK 637

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            MP  P  +++ +LL  CRIHGN ELG++AS++L  +  +N   +VLLS
Sbjct: 638 DMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLS 686



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 267/560 (47%), Gaps = 9/560 (1%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           SL ++    +L  ++H  +V  G     F+   L+ +Y+  G        FD++  +++ 
Sbjct: 81  SLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVY 140

Query: 112 SWTLIVSAAIQNGEFDMGLK-MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +W  ++SA ++NG F   +   Y  +    F  + +    V+K C ++     G  IHC+
Sbjct: 141 TWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCW 197

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             K+  + + FV  S+++ Y++ G V  A  +F  +   D+G WNAMI G    G   +A
Sbjct: 198 VFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 257

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L+V+  M  EGI MD  T  + L  C+ + D      IH  +I+  +E  + + NALI+M
Sbjct: 258 LDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINM 317

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A KVF++M  +DV+SWN++   + +N +P      F K  L+G  P+ +T 
Sbjct: 318 YAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTL 377

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVS 409
             L     +  D      +    +  G+L E  V  ++++ M+ + G ++ AH VF+ + 
Sbjct: 378 VSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIP 437

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVG 468
            K++ +WN L+SGY  N   ++ ++ +  + E   +++N  T+  ++         Q   
Sbjct: 438 VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGM 497

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IHG +IKT      ++ + LI  Y   G+L ++        R     W A++S     G
Sbjct: 498 RIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHG 557

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           H  +A+ +F  + + G KPD     ++L++C+  G     K     + + G    +    
Sbjct: 558 HGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYG 617

Query: 589 AVIDAYAKCGDIKGARMAFD 608
            ++D   + G ++   MA+D
Sbjct: 618 CMVDLLGRAGFLE---MAYD 634



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 180/385 (46%), Gaps = 4/385 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +A  L +   L      T +H +++K G   ++F+ N LI MY+K G  G   +VF
Sbjct: 272 DSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVF 331

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            +M  R++VSW  I++A  QN +       +  M+ NG  P+   + S+  +       +
Sbjct: 332 QQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYK 391

Query: 163 FGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
              S+H F ++   + +   +G +V++ YAKLG + +A +VF  I   DV  WN +I GY
Sbjct: 392 NSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGY 451

Query: 222 AHCGYGFEALNVVSSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
              G   EA+ V   M     I +++ T+++ L   + V     G +IHG +I++ +   
Sbjct: 452 TQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLD 511

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +   LID+Y K   +  A  +F ++  +  + WN +      + +  +   LF +   
Sbjct: 512 VFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQD 571

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+HVTF  LL  C     +D G     L    G          ++ +  R G +EM
Sbjct: 572 EGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEM 631

Query: 401 AHSVFDNVS-YKNITTWNELLSGYC 424
           A+    ++  + + + W  LL G C
Sbjct: 632 AYDFIKDMPLHPDASIWGALL-GAC 655


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 179/621 (28%), Positives = 315/621 (50%), Gaps = 5/621 (0%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P   +   ++  C      + G +IH   L+     + ++  S++N YAK G +  A+ V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 203 FYSISSDDVGCWNAMIGGYAH---CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           F SI++ DV  WN +I GY+     GY F  + +   M  E    + +TF       S  
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENTLPNGHTFSGVFTAASSS 126

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            +   G Q H L I++     + + ++LI+MY K   M  A KVF+ + +++ +SW T+ 
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G++  +   +   LF          +   ++ +L        +  G Q+ CLAL  G L
Sbjct: 187 SGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL 246

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
              +V ++L+ M+ +CG ++ A   F+    K+  TW+ +++GY       + L  F N+
Sbjct: 247 SIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNM 306

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             +G + +  TF  V+  C      +   QIHG  +K G+    Y  ++L+  Y   G L
Sbjct: 307 HLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSL 366

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            ++ +  +  +  D+  W +M+S     G N  A+T++  +      P E  + ++L +C
Sbjct: 367 VDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRAC 426

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +++ A ++ K IH   IK GF+ EV + SA+   YAKCG ++   + F +   S D++ +
Sbjct: 427 SSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVF-RRMPSRDIMTW 485

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           N +I   + +G   +A+E+F++++    +P   TFV+V+SACSH GLV++G + F+ M  
Sbjct: 486 NAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLD 545

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           ++G+ P  + Y C+VD+LSR G L + K  IE         ++R LL  CR + N ELG 
Sbjct: 546 EFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGA 605

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
           +A EKL+ L  +  +A++LLS
Sbjct: 606 YAGEKLMELGSQESSAYILLS 626



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 258/542 (47%), Gaps = 5/542 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +++ G  + ++L N+L+ +Y+KCG       VF+ +  +++VSW  +++   Q
Sbjct: 29  GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQ 88

Query: 123 NGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            G   +   ++++  M+    +PN      V     S   +  G   H  A+K     + 
Sbjct: 89  KGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDV 148

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S++N Y K+G +  A +VF +I   +   W  +I GYA     FEA  +   M  E
Sbjct: 149 FVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRRE 208

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               DK+ + + L   ++      G+QIH L +++ +    S+ NAL+ MY K   +D A
Sbjct: 209 EGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K FE   DKD I+W+ +  G+++  +  +  +LF+   L+G++P+  TF  ++  C  +
Sbjct: 269 LKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G Q+   +L  G+  +    ++L+ M+ +CG++  A   FD +   +I  W  ++
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMI 388

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N  +   L  +C +    +  +  T   V+  C      +   QIH   IK GFS
Sbjct: 389 SGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 448

Query: 481 SCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               I S+L   Y   G L D +  F     R D+ +W AM+S L   G   +A+ +F  
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-DIMTWNAMISGLSQNGEGLKALELFEE 507

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCG 598
           L     KPD      +L++C+ +G  +R K     ++ + G    V   + ++D  ++ G
Sbjct: 508 LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAG 567

Query: 599 DI 600
            +
Sbjct: 568 KL 569



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 12/195 (6%)

Query: 34  FCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           +C     R  P  + +A  L    +L +   G Q+H   +K GF+ ++ + + L  MY+K
Sbjct: 404 YCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAK 463

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG    G  VF  M  R++++W  ++S   QNGE    L+++ +++     P+     +V
Sbjct: 464 CGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNV 523

Query: 152 MKVCVSMGASE-----FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           +  C  MG  E     F   +  F +  R+E      C V +  ++ G +   +    S 
Sbjct: 524 LSACSHMGLVERGKVYFRMMLDEFGIVPRVEH---YACMV-DILSRAGKLHETKEFIESA 579

Query: 207 SSDDVGC-WNAMIGG 220
           + D   C W  ++G 
Sbjct: 580 TIDHGMCLWRILLGA 594


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 286/536 (53%), Gaps = 16/536 (2%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G+Q+H L+I +       + N L++MY K   +D+A K+F+ M  ++++SW  +  G S+
Sbjct: 24  GKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQ 83

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N    +    F    + G  P    FS  +R C  L  +++G Q+ CLAL  G   E  V
Sbjct: 84  NSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFV 143

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S+L  M+ +CGA+  A  VF+ +  K+  +W  ++ GY       + L  F  + +  V
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEV 203

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
            ++       +  C   +  +    +H +++K GF S  ++ ++L   Y   G ++++  
Sbjct: 204 TIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASN 263

Query: 505 -FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
            F   +E  ++ S+  ++   V      + +++F  L   G +P+E+   +++ +CA   
Sbjct: 264 VFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQA 323

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A ++   +H  V+K+ F+ + +V+S ++D Y KCG ++ A  AFD+  +  + I +N+L+
Sbjct: 324 ALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTE-IAWNSLV 382

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             +  HGL  +A++ F++M    ++P+  TF+S+++ CSH GLV++G   F SMD  YG+
Sbjct: 383 SVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGV 442

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P  + Y C++D+L R G L++AK  I  MPF+P+   + S L  CRIHG+KE+G+ A+E
Sbjct: 443 VPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAE 502

Query: 744 KLLLLLPKNDAAHVLLSK--------------RKRQREGNLLDHEGVCNVNDGIKT 785
           KL+ L PKN  A VLLS               R R R+GN+    G   V+ G KT
Sbjct: 503 KLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKT 558



 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/418 (32%), Positives = 215/418 (51%), Gaps = 1/418 (0%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           +D   LA  +      K    G Q+H  ++  G+T   FL N+L+ MYSKCG     L++
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FD M +RNLVSWT ++S   QN +F   ++ +  M+  G +P +FA  S ++ C S+G+ 
Sbjct: 63  FDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  +HC ALK  I    FVG ++ + Y+K G +  A +VF  +   D   W AMI GY
Sbjct: 123 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 182

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           +  G   EAL     M+ E +T+D++   + L  C  +     GR +H  +++   E  I
Sbjct: 183 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 242

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            + NAL DMY K+  M+ A  VF   ++ ++V+S+  L  G+ E +   +  S+F +   
Sbjct: 243 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 302

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  PN  TFS L++ C     L+ G QL    +   F ++  V+S L+ M+ +CG +E 
Sbjct: 303 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEH 362

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A   FD +       WN L+S +  +    D +K F  + + GV+ N  TF  ++  C
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGC 420



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 185/381 (48%), Gaps = 2/381 (0%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +++   K   L  G QL  L +  G+     +T+ L+ M+ +CG ++ A  +FD +  +N
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W  ++SG   N   ++ ++TFC +   G       F   +  C    + +M  Q+H 
Sbjct: 71  LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             +K G  S  ++ S+L   Y   G + ++ +        D  SW AM+      G   E
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+  F  +++     D+++L + L +C A+ A +  +S+H  V+KLGF ++++V +A+ D
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+K GD++ A   F       +V+ Y  LI  Y     + + + +F +++   ++P++ 
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF S++ AC+++  +++G  L   +  +      P     LVDM  + G LE A    + 
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQV-MKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDE 369

Query: 713 MPFQPSPTVYRSLLSGCRIHG 733
           +   P+   + SL+S    HG
Sbjct: 370 IG-DPTEIAWNSLVSVFGQHG 389



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 1/222 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +  D   L  +L     LK+   G  VH  +VKLGF +DIF+ N L  MYSK G   
Sbjct: 200 DEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDME 259

Query: 97  WGLRVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               VF   +E RN+VS+T ++   ++  + + GL ++V+++  G  PNEF   S++K C
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            +  A E G  +H   +KI  +++PFV   +++ Y K G +  A + F  I       WN
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWN 379

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +++  +   G G +A+     M+  G+  +  TFI+ L GCS
Sbjct: 380 SLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCS 421



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 8/279 (2%)

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           +V++T  +++  +   Q+H  +I  G++ C ++ + L+  Y   G+LD++ +  +   + 
Sbjct: 10  HVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQR 69

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           ++ SW AM+S L       EA+  F  +   GE P ++   + + +CA++G+ +  K +H
Sbjct: 70  NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 129

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
              +K G  +E++V S + D Y+KCG +  A   F++     D + +  +I  Y+  G  
Sbjct: 130 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEE-MPCKDEVSWTAMIDGYSKIGEF 188

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDC 689
            EA+  F KM    +   Q    S + AC       K C   +S+ S   + G +     
Sbjct: 189 EEALLAFKKMIDEEVTIDQHVLCSTLGACG----ALKACKFGRSVHSSVVKLGFESDIFV 244

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
              L DM S+ G +E A +V  I     +   Y  L+ G
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDG 283



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GTQ+H  ++K+ F  D F+ + L+ MY KCG     ++ FDE+ +   ++W  +VS   Q
Sbjct: 328 GTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQ 387

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +G     +K +  M   G  PN     S++  C   G  E G
Sbjct: 388 HGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEG 429



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 10/171 (5%)

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D   L  ++ + A     +R K +H  +I  G+    ++ + +++ Y+KCG++  A   F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D +    +++ +  +I   + +   SEA+  F  M++    P+Q  F S + AC+  G +
Sbjct: 64  D-TMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 668 DKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + G    CL  K     +G+         L DM S+ G + DA  V E MP
Sbjct: 123 EMGKQMHCLALK-----FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 164/579 (28%), Positives = 287/579 (49%), Gaps = 1/579 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ + + G V  A RVF  I       +  M+ G+A      +AL     M  + +   
Sbjct: 75  LVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPV 134

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            Y F   L+ C   A+  +G++IHGL+++S     +  +  L +MY K   +  A KVF+
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           RM ++D++SWNT+  G+S+N        + +       +P+ +T   +L     L  + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G ++   A+  GF    N+ ++L+ M+ +CG+++ A  +FD +  +N+ +WN ++  Y  
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    + +  F  + + GV+    +    +  C    + +    IH   ++        +
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSV 374

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SLI  Y    ++D +       +   + SW AM+      G   EA+  F  +     
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTV 434

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KPD +   +++ + A +      K IH  V++   +  V+V +A++D YAKCG I  AR+
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARL 494

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD   +   V  +N +I  Y  HG+   A+E+F++M+   ++P+  TF+SV+SACSH G
Sbjct: 495 IFDM-MSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV+ G   F  M   Y ++PS D YG +VD+L R G L +A   I  MP +P+  VY ++
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
           L  C+IH N    E  +E+L  L P++   HVLL+   R
Sbjct: 614 LGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYR 652



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 236/498 (47%), Gaps = 33/498 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++HG +VK GF+ D+F    L  MY+KC       +VFD M ER+LVSW  IV+   
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYS 212

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG   M L+M   M      P+   + SV+    ++     G  IH +A++   +    
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ YAK G +  A  +F  +   +V  WN+MI  Y       EA+ +   ML EG
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEG 332

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +     + + AL  C+ + D + GR IH L +  E++ ++S+VN+LI MY K   +D A 
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAA 392

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F ++  + ++SWN +  GF++N  P +  + F +      +P+  T+  ++    +L 
Sbjct: 393 SMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELS 452

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
                  +  + +         VT++L+ M+ +CGA+ +A  +FD +S +++TTWN ++ 
Sbjct: 453 ITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  +      L+ F  + +  +  NG TF  V+  C  S                G   
Sbjct: 513 GYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHS----------------GLVE 556

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            G  C  ++K        + S E S       M  +GAM+  L   G  +EA   +  ++
Sbjct: 557 AGLKCFHMMKE-------NYSIEPS-------MDHYGAMVDLLGRAGRLNEA---WDFIM 599

Query: 542 EAGEKPDEYILGTILNSC 559
           +   KP   + G +L +C
Sbjct: 600 QMPVKPAVNVYGAMLGAC 617



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 149/629 (23%), Positives = 283/629 (44%), Gaps = 13/629 (2%)

Query: 69  HIVKLGFTNDIF----LQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQN 123
           HI+ L F N ++     Q  L++++ + G      RVF+ + ++ N++ +T++   A + 
Sbjct: 55  HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFA-KV 113

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
            + D  LK +V M+ +   P  +    ++KVC        G  IH   +K     + F  
Sbjct: 114 SDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
             + N YAK   V  A +VF  +   D+  WN ++ GY+  G    AL +V+ M  E + 
Sbjct: 174 TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLK 233

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
               T ++ L   S +    IG++IHG  +R+  +  ++I  AL+DMY K   +  A  +
Sbjct: 234 PSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLL 293

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M +++V+SWN++   + +N+NP +   +F K +  G +P  V+    L  C  L DL
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDL 353

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G  +  L++        +V +SLI M+C+C  V+ A S+F  +  + I +WN ++ G+
Sbjct: 354 ERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGF 413

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    + L  F  +    V+ +  T+  V+              IHG +++       
Sbjct: 414 AQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNV 473

Query: 484 YICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
           ++ ++L+  Y   G  +     F   +ER  + +W AM+      G    A+ +F  + +
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHGIGKAALELFEEMQK 532

Query: 543 AGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
              +P+     +++++C+  G  +   K  H           +    A++D   + G + 
Sbjct: 533 GTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLN 592

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF-VSVMSA 660
            A     Q      V VY  ++ A   H  V+ A ++ +  +L  L P    + V + + 
Sbjct: 593 EAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAE--RLFELNPEDGGYHVLLANI 650

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
                + +K   +  SM  Q G++ +P C
Sbjct: 651 YRAASMWEKVGQVRVSMLRQ-GLRKTPGC 678



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 229/486 (47%), Gaps = 16/486 (3%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ CS + +    R I  LI ++ +         L+ ++ +   +D A +VFE +  K  
Sbjct: 44  LERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLN 100

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           + + T+  GF++  +  +    F +       P    F+ LL+ CG   +L +G ++  L
Sbjct: 101 VLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  GF  +    + L  M+ +C  V  A  VFD +  +++ +WN +++GY  N      
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L+    + E  ++ +  T   V+         ++  +IHG  ++ GF S   I ++L+  
Sbjct: 221 LEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDM 280

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G L  +    +G    ++ SW +M+ A V   +  EA+ IF  +++ G KP +  +
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
              L++CA +G  +R + IH   ++L  +  V V +++I  Y KC ++  A   F +   
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGK-LQ 399

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA-----CSHKGLV 667
           S  ++ +N +I+ +A +G   EA+  F +M+   ++P   T+VSV++A      +H    
Sbjct: 400 SRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKW 459

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
             G ++   +D    +  +      LVDM ++ G +  A+ + ++M  +   T + +++ 
Sbjct: 460 IHGVVMRNCLDKNVFVTTA------LVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 512

Query: 728 GCRIHG 733
           G   HG
Sbjct: 513 GYGTHG 518



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 171/337 (50%), Gaps = 1/337 (0%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N  C ++ L+   I +   L     L+   +G ++HG+ ++ GF + + +   L+ MY+K
Sbjct: 225 NLMCEEN-LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAK 283

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       +FD M ERN+VSW  ++ A +QN      + ++  M   G  P + +V   
Sbjct: 284 CGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGA 343

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +G  E G  IH  ++++ +++N  V  S+++ Y K  +V  A  +F  + S  +
Sbjct: 344 LHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI 403

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI G+A  G   EALN  S M    +  D +T+++ +   + ++     + IHG+
Sbjct: 404 VSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGV 463

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           ++R+ ++ ++ +  AL+DMY K   +  A  +F+ M+++ V +WN +  G+  +      
Sbjct: 464 VMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAA 523

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
             LF +      RPN VTF  ++  C     ++ GL+
Sbjct: 524 LELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLK 560


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/572 (29%), Positives = 296/572 (51%), Gaps = 4/572 (0%)

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           A  G +  A     ++   D    N MI G+A  G    AL     ML +G   D++TF 
Sbjct: 52  AAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFP 111

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             ++ C+ +   D GR  HG++I+  +E  +   N+L+  Y K   ++ A +VF+ M  +
Sbjct: 112 VVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVR 171

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL--LRQCGKLLDLDLGLQ 368
           D+++WN +  G+  N       + F + +       H +  I+  L  C        G +
Sbjct: 172 DIVTWNIMVDGYVSNGLGSLALACFQE-MHDALEVQHDSVGIIAALAACCLEFSSMQGKE 230

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +    +  G   +  V +SL+ M+C+CG V  A SVF  +  + + TWN ++ GY  N  
Sbjct: 231 IHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNER 290

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             +    F  +   G++V   T   ++  C ++E+      +HG +++  F     + ++
Sbjct: 291 PDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETA 350

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L++ Y   G++++S +         + SW  M++A +++    EA+T+F  L+     PD
Sbjct: 351 LLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPD 410

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
            + + T++ +   +G+ +  + IH ++I LG+     + +AV+  YA+ GD+  +R  FD
Sbjct: 411 YFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFD 470

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +   S DVI +NT+IM YA HG    A+E+FD+MK   LQP+++TFVSV++ACS  GLVD
Sbjct: 471 KMV-SKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVD 529

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G + F  M  +YGM P  + YGC+ D+L R G L +    IE MP  P+  V+ SLL+ 
Sbjct: 530 EGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            R   + ++ E+A+E++  L   N   +++LS
Sbjct: 590 SRNQNDIDIAEYAAERIFQLEHDNTGCYIVLS 621



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 203/401 (50%), Gaps = 3/401 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   HG ++KLG  +D++  N+L+A Y+K G      RVFD M  R++V+W ++V   + 
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVS 185

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVG--SVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NG   + L  + +M  +       +VG  + +  C    +S  G  IH + ++  +E++ 
Sbjct: 186 NGLGSLALACFQEMH-DALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDI 244

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG S+L+ Y K G+VA A  VF ++    V  WN MIGGYA      EA +    M  E
Sbjct: 245 KVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAE 304

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ ++  T IN L  C+       GR +HG ++R +    + +  AL++MY K   ++ +
Sbjct: 305 GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESS 364

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F ++A+K ++SWN +   +   +   +  +LF + +     P++ T S ++     L
Sbjct: 365 EKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLL 424

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L    Q+    +  G+ +   + +++++M+ R G V  +  +FD +  K++ +WN ++
Sbjct: 425 GSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMI 484

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            GY  +      L+ F  +  +G++ N  TF  V+  C  S
Sbjct: 485 MGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 197/433 (45%), Gaps = 3/433 (0%)

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           Y  M  +G  P+ F    V+K C  +G  + G + H   +K+ +E + +   S++ FYAK
Sbjct: 95  YRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAK 154

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM--LFEGITMDKYTFI 250
           LG V  AERVF  +   D+  WN M+ GY   G G  AL     M    E +  D    I
Sbjct: 155 LGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALE-VQHDSVGII 213

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
            AL  C L      G++IHG +IR  +E  I +  +L+DMY K   + YA  VF  M  +
Sbjct: 214 AALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
            V++WN + GG++ N+ P +    F +    G +   VT   LL  C +      G  + 
Sbjct: 274 TVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVH 333

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +   FL    + ++L+ M+ + G VE +  +F  ++ K + +WN +++ Y +     
Sbjct: 334 GYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYT 393

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           + +  F  +    +  +  T   VV       + +   QIH  II  G++    I ++++
Sbjct: 394 EAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVL 453

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G +  S E  +     D+ SW  M+      G    A+ +F  +   G +P+E 
Sbjct: 454 HMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNES 513

Query: 551 ILGTILNSCAAIG 563
              ++L +C+  G
Sbjct: 514 TFVSVLTACSVSG 526



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 147/299 (49%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S + G ++HG++++ G   DI +  +L+ MY KCG   +   VF  M  R +V+W  ++ 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
               N   D     ++ M+  G         +++  C    +S +G S+H + ++ +   
Sbjct: 284 GYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  ++L  Y K+G V ++E++F  I++  +  WN MI  Y +     EA+ +   +L
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            + +  D +T    +    L+      RQIH  II      +  I+NA++ MY +S  + 
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVV 463

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            + ++F++M  KDVISWNT+  G++ +        +F +   +G +PN  TF  +L  C
Sbjct: 464 ASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 6/312 (1%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S + G  VHG++V+  F   + L+  L+ MY K G      ++F ++A + LVSW  ++
Sbjct: 324 ESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMI 383

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +A +    +   + +++++      P+ F + +V+   V +G+      IH + + +   
Sbjct: 384 AAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYA 443

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +N  +  +VL+ YA+ GDV A+  +F  + S DV  WN MI GYA  G G  AL +   M
Sbjct: 444 ENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEM 503

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSG 296
            + G+  ++ TF++ L  CS+    D G     L+++   +   I     + D+  +   
Sbjct: 504 KYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGD 563

Query: 297 MDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN---HVTFSI 352
           +    +  E M  D     W +L    S N+N    A    + I      N   ++  S 
Sbjct: 564 LREVLQFIESMPIDPTSRVWGSLLTA-SRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSS 622

Query: 353 LLRQCGKLLDLD 364
           +    G+  D++
Sbjct: 623 MYADAGRWEDVE 634



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 2/280 (0%)

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           + SL+      G ++ A      V   +    N ++ G+      A  L  +  + E G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  TF  VV+ C R          HG +IK G     Y C+SL+  Y   G ++++  
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIG 563
             +G    D+ +W  M+   V  G    A+  F  + +A E + D   +   L +C    
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           +  + K IH +VI+ G   ++ V ++++D Y KCG++  AR  F  +     V+ +N +I
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVF-ATMPLRTVVTWNCMI 282

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             YA +    EA + F +M+   LQ    T +++++AC+ 
Sbjct: 283 GGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQ 322



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 19/238 (7%)

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL+ S    G++D + E        D      M+      G    A+  +  ++E G +P
Sbjct: 46  SLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARP 105

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D +    ++  CA +G     ++ H  VIKLG   +VY  ++++  YAK G ++ A   F
Sbjct: 106 DRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVF 165

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGL 666
           D      D++ +N ++  Y  +GL S A+  F +M  A  +Q      ++ ++AC     
Sbjct: 166 D-GMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAAC----- 219

Query: 667 VDKGCLLFKSMDSQ--------YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
               CL F SM  +        +G++        L+DM  + G +  A+ V   MP +
Sbjct: 220 ----CLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  292 bits (748), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 163/624 (26%), Positives = 311/624 (49%), Gaps = 33/624 (5%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG---DVAAAE 200
           N     S+++ C+   + + G SIH   +      + ++   +L  YA+ G   D+  A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           ++F  +   ++  WN MI  YA      EA  +   ML  G+  D +TF +AL+ C  + 
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
             D G+Q+H  +I    +    + NALIDMY K    +   KVF+ M +++ ++WN++  
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249

Query: 321 GFSENKNPGQTASLFHKFILS--GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             ++  +      LF +   S  G +P+  TF+ LL  C    + + G Q+    +    
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 309

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                V + L++M+  CG +  A  +F+ ++ +N  +WN ++ GY  N    + L+ F  
Sbjct: 310 TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQ 369

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +  +G++ +  +   ++ +C    + Q   ++H  I++      G +   L+  Y   G 
Sbjct: 370 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 429

Query: 499 LDNSFEFSNGAERLD--MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +D +++  +   + D   A W ++++   ++G   E+   F  ++E+  + D   + TI+
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 489

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           N                          + + +A++D Y+KCG I  AR  FD + N  ++
Sbjct: 490 NL-------------------------LVLETALVDMYSKCGAITKARTVFD-NMNGKNI 523

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I  Y+ HG   EA+ ++++M    + P++ TF++++SACSH GLV++G  +F S
Sbjct: 524 VSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTS 583

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M   Y ++   + Y C+VD+L R G LEDAK  +E MP +P  + + +LL  CR+H + +
Sbjct: 584 MQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMD 643

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           +G  A+++L  L P+N   +V++S
Sbjct: 644 MGRLAAQRLFELDPQNPGPYVIMS 667



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 158/597 (26%), Positives = 279/597 (46%), Gaps = 77/597 (12%)

Query: 35  CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           C D+F        A +L +   L+SR  G QVH  ++  GF  D F+ N LI MY+KC  
Sbjct: 172 CPDNFT------FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD 225

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK--TNGFMPNEFAVGSVM 152
               L+VFDEM ERN V+W  I+SA  Q G F+  L +++ M+   +G  P++F   +++
Sbjct: 226 EESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLL 285

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
            +C +      G  IH   ++  I KN  V   +++ Y++ G +  A+ +F  ++  +  
Sbjct: 286 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 345

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            WN+MI GY   G   EAL +   M   GI  D ++  + L  C  ++D   GR++H  I
Sbjct: 346 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI 405

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSENKNPGQ 330
           +R+ +E    +   L+DMY K   MDYA+KV+++    D++   WN++  G++   N G 
Sbjct: 406 VRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYA---NKGL 462

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F+ F+                   ++L+ D+   +  +      L  E   ++L+ 
Sbjct: 463 KKESFNHFL-------------------EMLESDIEYDVLTMVTIVNLLVLE---TALVD 500

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CGA+  A +VFDN++ KNI +WN ++SGY  + C  + L  +  + + G+  N  T
Sbjct: 501 MYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVT 560

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTG---FSSCG-----------YICSSLIKSYVNF 496
           F  ++  C            H  +++ G   F+S             Y C  ++      
Sbjct: 561 FLAILSACS-----------HTGLVEEGLRIFTSMQEDYNIEAKAEHYTC--MVDLLGRA 607

Query: 497 GQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           G+L+++ EF        ++++WGA++ A  VH+  +   +          + P  Y++  
Sbjct: 608 GRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVI-- 665

Query: 555 ILNSCAAIGAYQRTKSIH-----------PFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           + N  AA G ++  + I            P V  +  N+E+ +  A    + K  +I
Sbjct: 666 MSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEI 722



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 153/669 (22%), Positives = 297/669 (44%), Gaps = 71/669 (10%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSA 119
           G  +H  ++  G+  D +L   ++ +Y++ G      +  ++F+EM ERNL +W  ++ A
Sbjct: 90  GKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILA 149

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             +  ++     ++  M   G  P+ F   S ++VC ++ + + G  +H   +    + +
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML- 238
            FVG ++++ YAK  D  +  +VF  +   +   WN++I   A  G+  +AL +   M  
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE 269

Query: 239 -FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             +GI  D++TF   L  C+   + + GRQIH  +IR+ +  +I +   L+ MY +   +
Sbjct: 270 SEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRL 329

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           +YA ++F RMA+++  SWN++  G+ +N    +   LF +  L+G +P+  + S +L  C
Sbjct: 330 NYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC 389

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITT 415
             L D   G +L    +     +E  +   L+ M+ +CG+++ A  V+D    K  N   
Sbjct: 390 VSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTAL 449

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +L+GY       +    F  + ES +E +  T               MV  ++  ++
Sbjct: 450 WNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT---------------MVTIVNLLVL 494

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +T        C ++ K+   F  +       NG    ++ SW AM+S     G + EA+ 
Sbjct: 495 ETALVDMYSKCGAITKARTVFDNM-------NGK---NIVSWNAMISGYSKHGCSKEALI 544

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           ++  + + G  P+E     IL++C+  G  +    I   +       E Y   A  + Y 
Sbjct: 545 LYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM------QEDYNIEAKAEHYT 598

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
              D+ G                           G + +A E  +KM    ++P  +T+ 
Sbjct: 599 CMVDLLG-------------------------RAGRLEDAKEFVEKMP---IEPEVSTWG 630

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY---LEDAKHVIEI 712
           +++ AC     +D G L  + +       P P  Y  + ++ +  G    +ED + ++++
Sbjct: 631 ALLGACRVHKDMDMGRLAAQRLFELDPQNPGP--YVIMSNIYAAAGRWKEVEDIRQMMKM 688

Query: 713 MPFQPSPTV 721
              +  P V
Sbjct: 689 KGVKKDPGV 697



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 116/232 (50%), Gaps = 8/232 (3%)

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN--- 501
           +VN   +  +++ C  S + Q    IH  +I  G++   Y+ + ++  Y   G LD+   
Sbjct: 68  DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127

Query: 502 -SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
               F    ER ++ +W  M+ A        EA  IF  +++ G  PD +   + L  C 
Sbjct: 128 ARKLFEEMPER-NLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCG 186

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           A+ +    K +H  +I  GF  + +V +A+ID YAKC D +     FD+    N V  +N
Sbjct: 187 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQV-TWN 245

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLAN--LQPSQATFVSVMSACSHKGLVDKG 670
           ++I A A  G  ++A+ +F +M+ +   +QP Q TF ++++ C+++   ++G
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQG 297


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 172/645 (26%), Positives = 323/645 (50%), Gaps = 40/645 (6%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           ++ C    A +   S+H   +K+ +  + F+  S+++ YAK      A  +F  +   ++
Sbjct: 10  LRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNI 69

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
             +  M+  + + G   EAL + + ML  + +  +++ +   L+ C LV D ++G  +H 
Sbjct: 70  VSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQ 129

Query: 271 LIIRSEVECSISIVNALIDMYIK-SSGMDY------------------------------ 299
            +  + +E    ++NAL+DMY+K  S MD                               
Sbjct: 130 HVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRD 189

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPG--QTASLFHKFILSGSRPNHVTFSILLRQC 357
           AF +F++M + D++SWN++  G ++N +P   Q  S+ H     G + +  TF   L+ C
Sbjct: 190 AFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHG---KGLKLDAFTFPCALKAC 246

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITT 415
           G L +L +G Q+ C  +  G        SSLI M+  C  ++ A  +FD  S   +++  
Sbjct: 247 GLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAV 306

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +LSGY  N      L     +  SG + +  TF   ++ C   +N ++  Q+HG II
Sbjct: 307 WNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLII 366

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G+     + S LI  Y   G ++++          D+ +W +++      G      +
Sbjct: 367 TRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFS 426

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +V    + D ++L  +L   +++ + Q  K IH F +K G+ +E  + +A+ D YA
Sbjct: 427 LFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYA 486

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG+I+ A   FD  +   D + +  +I+  A +G   +A+ I  KM  +  +P++ T +
Sbjct: 487 KCGEIEDALALFDCLYEI-DTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITIL 545

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V++AC H GLV++   +FKS+++++G+ P P+ Y C+VD+ ++ G  ++A+++I  MPF
Sbjct: 546 GVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPF 605

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +P  T++ SLL  C  + N+ L    +E LL   P++ + +++LS
Sbjct: 606 KPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIMLS 650



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 286/591 (48%), Gaps = 43/591 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  I+KLG +N IFL N++I++Y+KC  F     +FDEM  RN+VS+T +VSA   +G 
Sbjct: 25  LHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSAFTNSGR 84

Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               L +Y  M ++    PN+F   +V+K C  +G  E G  +H    + R+E +  +  
Sbjct: 85  PHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMN 144

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV----------- 233
           ++L+ Y K G +  A+RVF+ I   +   WN +I G+A  G   +A N+           
Sbjct: 145 ALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVS 204

Query: 234 -------------------VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
                              +S M  +G+ +D +TF  AL+ C L+ +  +GRQIH  II+
Sbjct: 205 WNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIK 264

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSEN----KNP 328
           S +ECS   +++LIDMY     +D A K+F++ +   + +  WN++  G+  N    +  
Sbjct: 265 SGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRAL 324

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
           G  A + H    SG++ +  TFSI L+ C    +L L  Q+  L +  G+  +  V S L
Sbjct: 325 GMIACMHH----SGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSIL 380

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I ++ + G +  A  +F+ +  K++  W+ L+ G         V   F ++    +E++ 
Sbjct: 381 IDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDH 440

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
                V++      + Q   QIH   +K G+ S   I ++L   Y   G+++++    + 
Sbjct: 441 FVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDC 500

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
              +D  SW  ++      G   +A++I H ++E+G KP++  +  +L +C   G  +  
Sbjct: 501 LYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGLVEEA 560

Query: 569 KSIHPFV-IKLGFNTEVYVASAVIDAYAKCGDIKGAR-MAFDQSFNSNDVI 617
            +I   +  + G        + ++D +AK G  K AR +  D  F  +  I
Sbjct: 561 WTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTI 611



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/556 (24%), Positives = 235/556 (42%), Gaps = 39/556 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF----------------GW-------- 97
           LG  VH H+ +     D  L N L+ MY KCG                   W        
Sbjct: 123 LGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHA 182

Query: 98  -------GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
                     +FD+M E +LVSW  I++    N      L+    M   G   + F    
Sbjct: 183 KQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNAS-PHALQFLSMMHGKGLKLDAFTFPC 241

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS--S 208
            +K C  +G    G  IHC  +K  +E + +   S+++ Y+    +  A ++F   S  +
Sbjct: 242 ALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLA 301

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           + +  WN+M+ GY   G  + AL +++ M   G   D YTF  AL+ C    +  +  Q+
Sbjct: 302 ESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQV 361

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HGLII    E    + + LID+Y K   ++ A ++FER+ +KDV++W++L  G +     
Sbjct: 362 HGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLG 421

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
               SLF   +      +H   SI+L+    L  L  G Q+    L  G+  E  +T++L
Sbjct: 422 TLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTAL 481

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
             M+ +CG +E A ++FD +   +  +W  ++ G   N      +     + ESG + N 
Sbjct: 482 TDMYAKCGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNK 541

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAI-IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
            T   V+  C  +   +    I  +I  + G + C    + ++  +   G+   +    N
Sbjct: 542 ITILGVLTACRHAGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLIN 601

Query: 508 GAE-RLDMASWGAMMSALVHQGHNHEA-VTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
               + D   W +++ A     + H A +   H L  + E    YI+  + N  A++G +
Sbjct: 602 DMPFKPDKTIWCSLLDACGTYKNRHLANIVAEHLLATSPEDASVYIM--LSNVYASLGMW 659

Query: 566 QRTKSIHPFVIKLGFN 581
                +   V K+G  
Sbjct: 660 DNLSKVREAVRKVGIK 675



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/529 (24%), Positives = 229/529 (43%), Gaps = 42/529 (7%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           MD      AL+ C         + +H LII+  +   I ++N++I +Y K S  D A  +
Sbjct: 1   MDLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTL 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLD 362
           F+ M  ++++S+ T+   F+ +  P +  +L++  + S + +PN   +S +L+ CG + D
Sbjct: 61  FDEMPHRNIVSFTTMVSAFTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGD 120

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           ++LG+ +           +  + ++L+ M+ +CG++  A  VF  +  KN T+WN L+ G
Sbjct: 121 VELGMLVHQHVSEARLEFDTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILG 180

Query: 423 YCFNCCDADVLKTFCNI-------WES-----------------------GVEVNGCTFF 452
           +       D    F  +       W S                       G++++  TF 
Sbjct: 181 HAKQGLMRDAFNLFDQMPEPDLVSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFP 240

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SNGAE 510
             ++ C       M  QIH  IIK+G     Y  SSLI  Y N   LD + +    N   
Sbjct: 241 CALKACGLLGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPL 300

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
              +A W +M+S  V  G    A+ +   +  +G + D Y     L  C      +    
Sbjct: 301 AESLAVWNSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQ 360

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H  +I  G+  +  V S +ID YAK G+I  A   F++  N  DV+ +++LI+  A  G
Sbjct: 361 VHGLIITRGYELDHVVGSILIDLYAKQGNINSALRLFERLPN-KDVVAWSSLIVGCARLG 419

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSP 687
           L +    +F  M   +L+        V+   S    +  G    K + S   + G +   
Sbjct: 420 LGTLVFSLFMDMVHLDLEIDHFVLSIVLKVSSSLASLQSG----KQIHSFCLKKGYESER 475

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
                L DM ++ G +EDA  + + + ++     +  ++ GC  +G  +
Sbjct: 476 VITTALTDMYAKCGEIEDALALFDCL-YEIDTMSWTGIIVGCAQNGRAD 523



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 175/376 (46%), Gaps = 16/376 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE---MAERNLVSW 113
           L    +G Q+H  I+K G     +  ++LI MYS C      +++FD+   +AE +L  W
Sbjct: 249 LGELTMGRQIHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAE-SLAVW 307

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             ++S  + NG++   L M   M  +G   + +     +KVC+          +H   + 
Sbjct: 308 NSMLSGYVANGDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIIT 367

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
              E +  VG  +++ YAK G++ +A R+F  + + DV  W+++I G A  G G    ++
Sbjct: 368 RGYELDHVVGSILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSL 427

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M+   + +D +     L+  S +A    G+QIH   ++   E    I  AL DMY K
Sbjct: 428 FMDMVHLDLEIDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAK 487

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A  +F+ + + D +SW  +  G ++N    +  S+ HK I SG++PN +T   +
Sbjct: 488 CGEIEDALALFDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGV 547

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYMFCRCGAVEMAHSVFDN 407
           L  C        GL  +   +      E  +T      + ++ +F + G  + A ++ ++
Sbjct: 548 LTACRH-----AGLVEEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLIND 602

Query: 408 VSYK-NITTWNELLSG 422
           + +K + T W  LL  
Sbjct: 603 MPFKPDKTIWCSLLDA 618


>gi|15241649|ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g08490
 gi|9759343|dbj|BAB09998.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332003927|gb|AED91310.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 191/743 (25%), Positives = 353/743 (47%), Gaps = 50/743 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AI 121
           G  +HG + KLG      +  +++ MY+KC       ++F +M   + V W ++++  ++
Sbjct: 40  GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99

Query: 122 QNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             G   M  + +  M   +   P+      V+ +CV +G S  G S+H + +K  +EK+ 
Sbjct: 100 SCGRETM--RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157

Query: 181 FVGCSVLNFYAKLGDV-AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            VG ++++ YAK G +   A   F  I+  DV  WNA+I G++      +A      ML 
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217

Query: 240 EGITMDKYTFINALQGCSLVADFDI----GRQIHGLII-RSEVECSISIVNALIDMYIKS 294
           E    +  T  N L  C+ + D +I    GRQIH  ++ RS ++  + + N+L+  Y++ 
Sbjct: 218 EPTEPNYATIANVLPVCASM-DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRV 276

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSIL 353
             ++ A  +F RM  KD++SWN +  G++ N    +   LFH  +  G   P+ VT   +
Sbjct: 277 GRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISI 336

Query: 354 LRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L  C +L DL  G ++    L H   L++ +V ++LI  + R G    A+  F  +S K+
Sbjct: 337 LPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKD 396

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I +WN +L  +  +      L    ++    + ++  T   +++ C   +    V ++HG
Sbjct: 397 IISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG 456

Query: 473 AIIKTG-----------------FSSCGYI------------------CSSLIKSYVNFG 497
             +K G                 ++ CG +                   +SL+  YVN G
Sbjct: 457 YSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG 516

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
             D++          D+ +W  M+         +EA+ +F  +   G +P+   +  +L 
Sbjct: 517 SHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLP 576

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
            CA + +    +  H ++I+ G   ++ +   ++D YAKCG +K A   F QS    D++
Sbjct: 577 VCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLV 634

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
           ++  ++  YA HG   EA+ I+  M  +N++P      ++++AC H GL+  G  ++ S+
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
            + +GM+P+ + Y C VD+++R G L+DA   +  MP +P+  ++ +LL  C  +   +L
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDL 754

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
           G   +  LL     +   HVL+S
Sbjct: 755 GHSVANHLLQAESDDTGNHVLIS 777



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 162/673 (24%), Positives = 299/673 (44%), Gaps = 56/673 (8%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY-FGWGL 99
           +   +  A  L L   L     G  +H +I+K G   D  + N L++MY+K G+ F    
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             FD +A++++VSW  I++   +N       + +  M      PN   + +V+ VC SM 
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238

Query: 160 ---ASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
              A   G  IH + ++   ++ + FV  S+++FY ++G +  A  +F  + S D+  WN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            +I GYA     F+A  +  +++ +G ++ D  T I+ L  C+ + D   G++IH  I+R
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358

Query: 275 -SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            S +    S+ NALI  Y +      A+  F  M+ KD+ISWN +   F+++    Q  +
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL---DEENVTSSLIY 390
           L H  +      + VT   LL+ C  +  +    ++   ++  G L   +E  + ++L+ 
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478

Query: 391 MFCRCGAVEMAHSV--------------------------------FDNVSYKNITTWNE 418
            + +CG VE AH +                                F  +S  ++TTW+ 
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL 538

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++  Y  +CC  + +  F  I   G+  N  T   ++  C +  +  +V Q HG II+ G
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                 +  +L+  Y   G L +++       R D+  + AM++     G   EA+ I+ 
Sbjct: 599 LGDI-RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKC 597
            + E+  KPD   + T+L +C   G  Q    I+  +  + G    +   +  +D  A+ 
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMA------------YAHHGLVSEAMEIFDKMKLA 645
           G +  A     Q     +  ++ TL+ A             A+H L +E+ +  + + ++
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777

Query: 646 NLQPSQATFVSVM 658
           N+  + A +  VM
Sbjct: 778 NMYAADAKWEGVM 790



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 198/405 (48%), Gaps = 24/405 (5%)

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSG 296
           L  G   D   F++ ++ C+ V+D   GR +HG + +   + CS  +  ++++MY K   
Sbjct: 13  LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAKCRR 71

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILL 354
           MD   K+F +M   D + WN +  G S   + G+    F K +      +P+ VTF+I+L
Sbjct: 72  MDDCQKMFRQMDSLDPVVWNIVLTGLS--VSCGRETMRFFKAMHFADEPKPSSVTFAIVL 129

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV-EMAHSVFDNVSYKNI 413
             C +L D   G  +    +  G   +  V ++L+ M+ + G +   A++ FD ++ K++
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC--------CRSENQQ 465
            +WN +++G+  N   AD  ++FC + +   E N  T   V+  C        CRS    
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR-- 247

Query: 466 MVGQIHGAII-KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
              QIH  ++ ++   +  ++C+SL+  Y+  G+++ +          D+ SW  +++  
Sbjct: 248 ---QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304

Query: 525 VHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                  +A  +FH+LV  G+  PD   + +IL  CA +      K IH ++++  +  E
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364

Query: 584 -VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              V +A+I  YA+ GD   A  AF    ++ D+I +N ++ A+A
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSL-MSTKDIISWNAILDAFA 408



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + + +   L +   L S  L  Q HG+I++ G   DI L+  L+ +Y+KCG      
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAY 622

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF   A R+LV +T +V+    +G     L +Y  M  +   P+   + +++  C   G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682

Query: 160 ASEFGYSIH 168
             + G  I+
Sbjct: 683 LIQDGLQIY 691


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  292 bits (747), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 182/607 (29%), Positives = 306/607 (50%), Gaps = 8/607 (1%)

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S   + F   +H   +     ++ F+   ++N YA LGDV+ +   F  I   DV  WN+
Sbjct: 128 SSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNS 187

Query: 217 MIGGYAHCGYGFEALNVVSSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           MI  Y H G+  EA+     +L    I  D YTF   L+ C  + D   GR+IH    + 
Sbjct: 188 MISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKL 244

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             + ++ +  +LI MY +      A  +F+ M  +D+ SWN +  G  +N N  Q   + 
Sbjct: 245 GFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVL 304

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +  L G + N VT   +L  C +L D+   + +    +  G   +  V+++LI M+ + 
Sbjct: 305 DEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF 364

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +E A   F  +   ++ +WN +++ Y  N         F  +  +G + +  T   + 
Sbjct: 365 GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLA 424

Query: 456 ETCCRSENQQMVGQIHGAIIKTGF-SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
               +S + +    +HG I++ G+      I ++++  Y   G LD++ +        D+
Sbjct: 425 SIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDV 484

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHP 573
            SW  +++     G   EA+ ++  + E  E  P++    +IL + A +GA Q+   IH 
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHG 544

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            VIK   + +V+VA+ +ID Y KCG +  A   F Q    + V  +N +I  +  HG   
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAE 603

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           + +++F +M    ++P   TFVS++SACSH G V++G   F+ M  +YG++PS   YGC+
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCM 662

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R GYLE A   I+ MP QP  +++ +LL  CRIHGN ELG++AS++L  +  KN 
Sbjct: 663 VDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNV 722

Query: 754 AAHVLLS 760
             +VLLS
Sbjct: 723 GYYVLLS 729



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/614 (24%), Positives = 278/614 (45%), Gaps = 27/614 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQ---------------------VHGHIVKLGFTNDI 79
           R+ PI L  +   S    S  LG Q                     +H  +V  G    I
Sbjct: 92  RRRPIQLFSAARSSPQFSSYGLGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSI 151

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK-MYVDMKT 138
           F+   L+ +Y+  G        FD++ ++++ +W  ++SA + NG F   +   Y  +  
Sbjct: 152 FISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLV 211

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           +   P+ +    V+K C   G    G  IHC+A K+  + N FV  S+++ Y++ G    
Sbjct: 212 SEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI 268

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A  +F  +   D+G WNAMI G    G   +AL+V+  M  EGI M+  T ++ L  C  
Sbjct: 269 ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQ 328

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D      IH  +I+  +E  + + NALI+MY K   ++ A K F++M   DV+SWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
              + +N +P      F K  L+G +P+ +T   L     +  D      +    +  G+
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448

Query: 379 LDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           L E+ V  ++++ M+ + G ++ AH VF+ +  K++ +WN L++GY  N   ++ ++ + 
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508

Query: 438 NIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            + E   +  N  T+  ++         Q   +IHG +IKT      ++ + LI  Y   
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+L ++        +    +W A++S     GH  + + +F  +++ G KPD     ++L
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++C+  G  +  K     + + G    +     ++D   + G ++ A           D 
Sbjct: 629 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDA 688

Query: 617 IVYNTLIMAYAHHG 630
            ++  L+ A   HG
Sbjct: 689 SIWGALLGACRIHG 702


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  292 bits (747), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 297/587 (50%), Gaps = 12/587 (2%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            KN F    +L+ Y+  GD+ AA+ +F S    +   W  M+  +A  G   +AL++  +
Sbjct: 71  HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 130

Query: 237 MLFEGITMDKYTFINALQ--GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           ML EG+  D+ T    L   GC++ +       +H   I+  ++  + + N L+D Y K 
Sbjct: 131 MLGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKH 183

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A +VF  M DKD +++N +  G S+     Q   LF     +G    H TFS +L
Sbjct: 184 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSIL 243

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +  L LG Q+  L L    +    V +SL+  + +C  ++    +FD +  ++  
Sbjct: 244 TVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 303

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           ++N +++ Y +N C A VL+ F  + + G +     +  ++       +  +  QIH  +
Sbjct: 304 SYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQL 363

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +  G +S   + ++LI  Y   G LD +   FSN +E+    SW A+++  V  G + EA
Sbjct: 364 VLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHEEA 422

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  +  AG +PD     +I+ + +++      + +H ++I+ G+ + V+  S ++D 
Sbjct: 423 LQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDM 482

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  A   FD+    N  I +N +I AYAH+G    A+++F+ M      P   T
Sbjct: 483 YAKCGCLDEALRTFDEMPERNS-ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVT 541

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+SV++ACSH GL D+    F  M  QY + P  + Y C++D L R G     + ++  M
Sbjct: 542 FLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEM 601

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PF+  P ++ S+L  CRIHGN+EL   A++KL  + P +   +V+LS
Sbjct: 602 PFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILS 648



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/643 (25%), Positives = 300/643 (46%), Gaps = 36/643 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTN----DIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+   NL  R L +  H H  +  F      +IF  N +++ YS  G       +F    
Sbjct: 42  LTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP 101

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV--CVSMGASEFG 164
            RN  +WT+++ A    G     L ++  M   G +P+   V +V+ +  C         
Sbjct: 102 HRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP------ 155

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+H FA+K  ++ + FV  ++L+ Y K G +AAA RVF  +   D   +NAM+ G +  
Sbjct: 156 -SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKE 214

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL + ++M   GI    +TF + L   + +A   +G Q+H L++RS    ++ + 
Sbjct: 215 GLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVN 274

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L+D Y K   +D   ++F+ M ++D +S+N +   ++ N+       LF +    G  
Sbjct: 275 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 334

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
              + ++ +L   G L D+ +G Q+    +  G   E+ + ++LI M+ +CG ++ A S 
Sbjct: 335 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F N S K+  +W  L++GY  N    + L+ F ++  +G+  +  TF  +++    S + 
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA---SSSL 451

Query: 465 QMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            M+G   Q+H  +I++G+ S  +  S L+  Y   G LD +    +     +  SW A++
Sbjct: 452 AMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 511

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGF 580
           SA  H G    A+ +F  ++  G  PD     ++L +C+  G A +  K  H    +   
Sbjct: 512 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSI 571

Query: 581 NTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           +      + VID   + G      +M  +  F + D I++ +++ +   HG    A    
Sbjct: 572 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA-DPIIWTSILHSCRIHGNQELARVAA 630

Query: 640 DKMKLANLQPSQATFVSVMS------------ACSHKGLVDKG 670
           D  KL  ++P+ AT   ++S            AC  K + D+G
Sbjct: 631 D--KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRG 671



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  LS++ +L    +G Q+H  +V LG  ++  L N LI MYSKCG        F   +E
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           ++ +SWT +++  +QNG+ +  L+++ DM+  G  P+     S++K   S+     G  +
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H + ++   + + F G  +++ YAK G +  A R F  +   +   WNA+I  YAH G  
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCS 257
             A+ +   ML  G   D  TF++ L  CS
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D    +  +  S +L    LG Q+H ++++ G+ + +F  + L+ MY+KCG     L
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R FDEM ERN +SW  ++SA    GE    +KM+  M   GF P+     SV+  C   G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 160 ASE 162
            ++
Sbjct: 554 LAD 556


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  291 bits (746), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 286/577 (49%), Gaps = 2/577 (0%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GIT 243
           S L    KLG +  A  +F  +S  D   W  +I GY +     EAL + S+M  + G+ 
Sbjct: 89  SQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQ 148

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D++    AL+ C+L  +   G  +HG  ++S +  S+ + +AL+DMY+K    +    V
Sbjct: 149 KDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSV 208

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE M  ++V+SW  +  G           S F +   S    +  TF++ L+   +   L
Sbjct: 209 FENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLL 268

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  +    +  GF +   V ++L  M+ +C   +    +F  +S  ++ +W  L+  Y
Sbjct: 269 HYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTY 328

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                +   L  F  + +S V  N  TF  V+  C      +   QIHG  ++ G     
Sbjct: 329 VQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDAL 388

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + +S+I  Y   G L  +    +G  R D+ SW  ++S      H  EA      +   
Sbjct: 389 SVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSRE 448

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G KP+E+ L ++L+ C ++   +  K +H + + +G + E  V SA+I  Y++ G+++ A
Sbjct: 449 GPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEA 508

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD S  +ND++ +  +I  YA HG   EA+ +F+ +    L P   TF+ +++AC+H
Sbjct: 509 SKIFD-SIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNH 567

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLVD G   +K M ++Y + PS + YGC++D+L R G L +A+H++  MPF     V+ 
Sbjct: 568 AGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWS 627

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL  CR HG+ +   WA+E++L L P +  AH+ L+
Sbjct: 628 TLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLA 664



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 149/613 (24%), Positives = 275/613 (44%), Gaps = 29/613 (4%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GF 141
           N+ +    K G       +F++M+ R+ +SWT +++  +     +  L ++ +M  + G 
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
             ++F V   +K C       FG  +H F++K  +  + FV  ++++ Y K+G       
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           VF ++++ +V  W A+I G  H G   + L+  S M    +  D +TF  AL+  +    
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
              G+ IH   I+     +  +VN L  MY K    DY  ++F +M+  DV+SW  L   
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMT 327

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           + +  +  +    F +   S   PN  TF+ ++  C  L     G Q+   AL  G +D 
Sbjct: 328 YVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA 387

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            +V++S+I ++ +CG ++ A  VFD ++ K+I +W+ ++S YC      +       +  
Sbjct: 388 LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSR 447

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G + N      V+  C      +   Q+H   +  G      + S+LI  Y   G L  
Sbjct: 448 EGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQE 507

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           + +  +  +  D+ SW AM++     G++ EA+++F ++   G  PD      IL +C  
Sbjct: 508 ASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACN- 566

Query: 562 IGAYQRTKSIHPFVIKLGF------NTEVYVASA------VIDAYAKCGDIKGAR-MAFD 608
                     H  ++ LGF        E  +A +      +ID   + G +  A  M  +
Sbjct: 567 ----------HAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLV 667
             F  +DV V++TL+ A   HG +  A  I+   ++  L P+ A   +++ +  S  G  
Sbjct: 617 MPFPCDDV-VWSTLLRACRDHGDLDRA--IWAAEQMLRLHPNSAGAHITLANIYSASGRR 673

Query: 668 DKGCLLFKSMDSQ 680
           ++   + K M S+
Sbjct: 674 EEAAHVRKLMKSK 686



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 152/622 (24%), Positives = 267/622 (42%), Gaps = 53/622 (8%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           DS L+KD   ++ +L       +   G  +HG  VK G  N +F+ + L+ MY K G   
Sbjct: 144 DSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTE 203

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN--GFMPNEFAVGSVMKV 154
            G  VF+ M  RN+VSWT ++   +  G    GL  + +M  +  G+  + FAV   +K 
Sbjct: 204 QGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA--LKA 261

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
               G   +G +IH   +K    +  +V  ++   Y+K        R+F  +S+ DV  W
Sbjct: 262 SAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSW 321

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
             +I  Y   G    AL+    M    ++ ++YTF + +  C+ +A    G QIHG  +R
Sbjct: 322 TNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALR 381

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +  ++S+ N++I +Y K   +  A  VF+ M  KD+ISW+T+   + +  +  +  + 
Sbjct: 382 LGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNY 441

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
                  G +PN    + +L  CG +  L+ G Q+   AL  G   E  V S+LI M+ R
Sbjct: 442 LSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSR 501

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A  +FD++   +I +W  +++GY  +    + +  F NI   G+  +  TF  +
Sbjct: 502 SGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGI 561

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C            H  ++  GF                +  + N ++ +   E    
Sbjct: 562 LTACN-----------HAGLVDLGF--------------YYYKLMTNEYQIAPSKEH--- 593

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP-DEYILGTILNSC-------AAIGAYQ 566
             +G ++  L   G   EA      +V     P D+ +  T+L +C        AI A +
Sbjct: 594 --YGCIIDLLCRAGRLSEA----EHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAE 647

Query: 567 RTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQS----FNSNDVIVYNT 621
           +   +HP           +Y AS   +  A    +  ++    +      NSND +  NT
Sbjct: 648 QMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQL--NT 705

Query: 622 LIMAYAHHGLVSEAMEIFDKMK 643
            +     H L  +   I + ++
Sbjct: 706 FVAGVQSHPLSKQITTILELLR 727


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  291 bits (745), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 297/586 (50%), Gaps = 12/586 (2%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           KN F    +L+ Y+  GD+ AA+ +F S    +   W  M+  +A  G   +AL++  +M
Sbjct: 72  KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 131

Query: 238 LFEGITMDKYTFINALQ--GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           L EG+  D+ T    L   GC++ +       +H   I+  ++  + + N L+D Y K  
Sbjct: 132 LGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHG 184

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A +VF  M DKD +++N +  G S+     Q   LF     +G    H TFS +L 
Sbjct: 185 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILT 244

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
               +  L LG Q+  L L    +    V +SL+  + +C  ++    +FD +  ++  +
Sbjct: 245 VAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVS 304

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +N +++ Y +N C A VL+ F  + + G +     +  ++       +  +  QIH  ++
Sbjct: 305 YNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 364

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
             G +S   + ++LI  Y   G LD +   FSN +E+    SW A+++  V  G + EA+
Sbjct: 365 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHEEAL 423

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  +  AG +PD     +I+ + +++      + +H ++I+ G+ + V+  S ++D Y
Sbjct: 424 QLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMY 483

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG +  A   FD+    N  I +N +I AYAH+G    A+++F+ M      P   TF
Sbjct: 484 AKCGCLDEALRTFDEMPERNS-ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTF 542

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +SV++ACSH GL D+    F  M  QY + P  + Y C++D L R G     + ++  MP
Sbjct: 543 LSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMP 602

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F+  P ++ S+L  CRIHGN+EL   A++KL  + P +   +V+LS
Sbjct: 603 FKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILS 648



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 165/643 (25%), Positives = 300/643 (46%), Gaps = 36/643 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTN----DIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+   NL  R L +  H H  +  F      +IF  N +++ YS  G       +F    
Sbjct: 42  LTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP 101

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV--CVSMGASEFG 164
            RN  +WT+++ A    G     L ++  M   G +P+   V +V+ +  C         
Sbjct: 102 HRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP------ 155

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+H FA+K  ++ + FV  ++L+ Y K G +AAA RVF  +   D   +NAM+ G +  
Sbjct: 156 -SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKE 214

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL + ++M   GI    +TF + L   + +A   +G Q+H L++RS    ++ + 
Sbjct: 215 GLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVN 274

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L+D Y K   +D   ++F+ M ++D +S+N +   ++ N+       LF +    G  
Sbjct: 275 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 334

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
              + ++ +L   G L D+ +G Q+    +  G   E+ + ++LI M+ +CG ++ A S 
Sbjct: 335 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F N S K+  +W  L++GY  N    + L+ F ++  +G+  +  TF  +++    S + 
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA---SSSL 451

Query: 465 QMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            M+G   Q+H  +I++G+ S  +  S L+  Y   G LD +    +     +  SW A++
Sbjct: 452 AMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 511

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGF 580
           SA  H G    A+ +F  ++  G  PD     ++L +C+  G A +  K  H    +   
Sbjct: 512 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSI 571

Query: 581 NTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           +      + VID   + G      +M  +  F + D I++ +++ +   HG    A    
Sbjct: 572 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA-DPIIWTSILHSCRIHGNQELARVAA 630

Query: 640 DKMKLANLQPSQATFVSVMS------------ACSHKGLVDKG 670
           D  KL  ++P+ AT   ++S            AC  K + D+G
Sbjct: 631 D--KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRG 671



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  LS++ +L    +G Q+H  +V LG  ++  L N LI MYSKCG        F   +E
Sbjct: 341 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 400

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           ++ +SWT +++  +QNG+ +  L+++ DM+  G  P+     S++K   S+     G  +
Sbjct: 401 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 460

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H + ++   + + F G  +++ YAK G +  A R F  +   +   WNA+I  YAH G  
Sbjct: 461 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 520

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCS 257
             A+ +   ML  G   D  TF++ L  CS
Sbjct: 521 KNAIKMFEGMLHCGFNPDSVTFLSVLAACS 550



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D    +  +  S +L    LG Q+H ++++ G+ + +F  + L+ MY+KCG     L
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R FDEM ERN +SW  ++SA    GE    +KM+  M   GF P+     SV+  C   G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 160 ASE 162
            ++
Sbjct: 554 LAD 556


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  291 bits (745), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 173/619 (27%), Positives = 317/619 (51%), Gaps = 3/619 (0%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKI--RIEKNPFVGCSVLNFYAKLGDVAAAER 201
           + +A   +++ C++ G +  G ++H   ++     + + F    +LN YAKLG +AAA R
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           +F  +   ++  +  ++ GYA  G   EA  +   +  EG  ++ +     L+    +  
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
             +   IH    +   + +  + ++LID Y     + +A  VF+ +  KD ++W  +   
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSC 225

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +SEN  P    + F K  ++G++PN    + +L+    L    LG  +   A+      E
Sbjct: 226 YSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTE 285

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            +V  +L+ M+ +CG +E A +VF+ + + ++  W+ L+S Y  +  +    + F  +  
Sbjct: 286 PHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMR 345

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           S V  N  +   V++ C       +  QIH  +IK G+ S  ++ ++L+  Y     ++N
Sbjct: 346 SSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMEN 405

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           S E        +  SW  ++      G   +A+++F  +  A     +    ++L +CA 
Sbjct: 406 SLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACAN 465

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
             + + T  IH  + K  FN +  V +++ID YAKCG I+ A   F +S    DV+ +N 
Sbjct: 466 TASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVF-ESIIQCDVVSWNA 524

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I  YA HG  ++A+E+F++M  ++ +P+  TFV+++S C   GLV++G  LF SM   +
Sbjct: 525 IISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDH 584

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
            ++PS D Y C+V +L R G L DA   I  +P  PSP V+R+LLS C +H N  LG+++
Sbjct: 585 RIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFS 644

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +EK+L + P+++  +VLLS
Sbjct: 645 AEKVLEIEPQDETTYVLLS 663



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 159/619 (25%), Positives = 296/619 (47%), Gaps = 6/619 (0%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  VH  +V+ G     D F  N L+ +Y+K G      R+FD M ERN+VS+  +V   
Sbjct: 66  GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGY 125

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
              G F+    ++  ++  G   N F + +++KV V+M A      IH  A K+  ++N 
Sbjct: 126 ALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNA 185

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S+++ Y+  G V+ A  VF  I   D   W AM+  Y+      +ALN  S M   
Sbjct: 186 FVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMA 245

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +   + L+    ++   +G+ IHG  +++  +    +  AL+DMY K   ++ A
Sbjct: 246 GAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDA 305

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VFE +   DVI W+ L   ++++    Q   +F + + S   PN  + S +L+ C  +
Sbjct: 306 RTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANV 365

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             LDLG Q+  L +  G+  E  V ++L+ ++ +C  +E +  +F ++   N  +WN ++
Sbjct: 366 AFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTII 425

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GYC +    D L  F  +  + V     TF  V+  C  + + +   QIH  I K+ F+
Sbjct: 426 VGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFN 485

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   +C+SLI +Y   G + ++ +      + D+ SW A++S     G   +A+ +F+ +
Sbjct: 486 NDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRM 545

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGD 599
            ++  KP++     +L+ C + G   +  S+ +   +       +   + ++    + G 
Sbjct: 546 NKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGR 605

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSVM 658
           +  A        ++   +V+  L+ +   H  V  A+  F   K+  ++P  + T+V + 
Sbjct: 606 LNDALKFIGDIPSTPSPMVWRALLSSCVVHKNV--ALGKFSAEKVLEIEPQDETTYVLLS 663

Query: 659 SACSHKGLVDKGCLLFKSM 677
           +  +  G++D+  LL KSM
Sbjct: 664 NMYAAAGILDQVALLRKSM 682



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 236/495 (47%), Gaps = 11/495 (2%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKSSGMDYAF 301
           +D Y     LQ C    D   GR +H  +++     +      N L+++Y K   +  A 
Sbjct: 45  LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+ M +++++S+ TL  G++      + A LF +    G   NH   + +L+    L+
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKV---LV 161

Query: 362 DLDL-GLQLQCLALHCGFLDEEN--VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +D  GL     A  C    + N  V SSLI  +  CGAV  A  VFD + +K+  TW  
Sbjct: 162 AMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTA 221

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S Y  N    D L TF  +  +G + N      V++      +  +   IHG  +KT 
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTL 281

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +  ++  +L+  Y   G ++++          D+  W  ++S       N +A  +F 
Sbjct: 282 CDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFL 341

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            ++ +   P+E+ L  +L +CA +      + IH  VIKLG+ +E++V +A++D YAKC 
Sbjct: 342 RMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCR 401

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           +++ +   F    ++N+V  +NT+I+ Y   G   +A+ +F +M+ A++  +Q TF SV+
Sbjct: 402 NMENSLEIFRSLRDANEV-SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVL 460

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            AC++   + K  +   S+  +            L+D  ++ G + DA  V E +  Q  
Sbjct: 461 RACANTASI-KHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCD 518

Query: 719 PTVYRSLLSGCRIHG 733
              + +++SG  +HG
Sbjct: 519 VVSWNAIISGYALHG 533



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 185/388 (47%), Gaps = 12/388 (3%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + +P  L   L  +  L S VLG  +HG  VK     +  +   L+ MY+KCGY      
Sbjct: 248 KPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDART 307

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+ +   +++ W+ ++S   Q+ + +   +M++ M  +  +PNEF++  V++ C ++  
Sbjct: 308 VFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAF 367

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  IH   +K+  E   FVG ++++ YAK  ++  +  +F S+   +   WN +I G
Sbjct: 368 LDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVG 427

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G+  +AL+V   M    +   + TF + L+ C+  A      QIH LI +S     
Sbjct: 428 YCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNND 487

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + N+LID Y K   +  A KVFE +   DV+SWN +  G++ +        LF++   
Sbjct: 488 TIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNK 547

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------R 394
           S ++PN VTF  LL  CG       GL  Q L+L      +  +  S+ +  C      R
Sbjct: 548 SDTKPNDVTFVALLSVCGS-----TGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGR 602

Query: 395 CGAVEMAHSVFDNV-SYKNITTWNELLS 421
            G +  A     ++ S  +   W  LLS
Sbjct: 603 AGRLNDALKFIGDIPSTPSPMVWRALLS 630



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDI 600
           A  K D Y    +L  C A G  +  +++H  V++ G     + + A+ +++ YAK G +
Sbjct: 41  ALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPL 100

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             AR  FD      +++ + TL+  YA  G   EA  +F +++
Sbjct: 101 AAARRLFD-GMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 175/617 (28%), Positives = 316/617 (51%), Gaps = 7/617 (1%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAAERVFYSI 206
           S+++ C S  +      IH   + + +  +P+   +  S+   YA  G    A ++F  +
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIG 265
            +  +  WNAMI  Y + G  ++AL +   ML  G    D YT+   ++ C      ++G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
             IH   + S  +    + N+L+ MY+    M+ A +VF+ M ++ ++SWNT+  G+ +N
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               +   +F   I  G  P+  T   +L  C  L +L++G ++  L       ++ +V 
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGV 444
           +SL+ M+ +CG ++ A  +F  +  +++ +W  +++GY  N  DA      C + +   V
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG-DARSALLLCQMMQFESV 321

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + N  T   V+  C    + +    +HG  I+    S   + ++LI  Y     ++ SF 
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +   +   A W A++S  +H G + +A+ +F  ++     P++  L ++L + A +  
Sbjct: 382 VFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLI 623
            Q+ +++H ++I+ GF + + VA+ +ID Y+KCG ++ A   F+       D+I ++ +I
Sbjct: 442 LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAII 501

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y  HG    A+ +FD+M  + ++P++ TF S++ ACSH GLVD+G  LFK M     M
Sbjct: 502 AGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQM 561

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
               D Y C++D+L R G LE+A  +I  M F+P+  V+ +LL  C IH N ELGE A++
Sbjct: 562 SLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAK 621

Query: 744 KLLLLLPKNDAAHVLLS 760
            L  L P N   +VLL+
Sbjct: 622 WLFELEPGNTGNYVLLA 638



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 256/548 (46%), Gaps = 11/548 (2%)

Query: 65  QVHGHIVKLGFTNDIF---LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           Q+H H + LG  +  +   L ++L A Y+  G      ++FDE+   +L SW  ++    
Sbjct: 39  QIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYT 98

Query: 122 QNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            +G     L ++V M  +G   P+ +    V+K C      E G  IH   +    + + 
Sbjct: 99  NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y   G++  A RVF  +    +  WN MI GY   G   EAL V   M+ +
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D  T ++ L  CS + + ++GR++H L+    +   IS+ N+L+DMY K   MD A
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M  +DV+SW T+  G+  N +      L         +PN VT + +L  C  L
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASL 338

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G  L   A+      E  V ++LI M+ +C  V ++  VF   S +    WN ++
Sbjct: 339 YSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAII 398

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG   N      ++ F  +    V+ N  T   ++       + Q    +HG +I++GF 
Sbjct: 399 SGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFL 458

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAER--LDMASWGAMMSALVHQGHNHEAVTIFH 538
           S   + + LI  Y   G L+++    NG  +   D+ +W A+++     GH   A+++F 
Sbjct: 459 SRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFD 518

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYA 595
            +V++G KP+E    +IL++C+  G       +  F++   ++   T+ Y  + VID   
Sbjct: 519 QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHY--TCVIDLLG 576

Query: 596 KCGDIKGA 603
           + G ++ A
Sbjct: 577 RAGRLEEA 584



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 236/507 (46%), Gaps = 41/507 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +H   V  GF +D F+QN+L+AMY  CG      RVFD M ER LVSW  +++   
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG     L ++  M   G  P+   V SV+ VC  +   E G  +H       + ++  
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L+ YAK G++  A+ +FY +   DV  W  M+ GY   G    AL +   M FE 
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T  + L  C+ +     GR +HG  IR ++E  + +  ALIDMY K + ++ +F
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF + + +    WN +  G   N    +   LF + ++    PN  T + LL     L 
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNEL 419
           DL     +    +  GFL    V + LI ++ +CG++E AH++F+ +    K+I TW+ +
Sbjct: 441 DLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS--------------ENQQ 465
           ++GY  +      +  F  + +SGV+ N  TF  ++  C  +              E+ Q
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSAL 524
           M        ++T   +C      +I      G+L+ ++E     A R + A WGA++ + 
Sbjct: 561 MS-------LRTDHYTC------VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYI 551
           V            H  VE GE   +++
Sbjct: 608 V-----------IHENVELGEVAAKWL 623



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 17/378 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK   +G +VH  +       DI + N+L+ MY+KCG       +F EM +R++VSWT +
Sbjct: 237 LKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTM 296

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  I NG+    L +   M+     PN   + SV+  C S+ + + G  +H +A++ ++
Sbjct: 297 MNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKL 356

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E    V  ++++ YAK  +V  + RVF   S      WNA+I G  H G   +A+ +   
Sbjct: 357 ESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQ 416

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML E +  +  T  + L   + + D    R +HG +IRS     I +   LID+Y K   
Sbjct: 417 MLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGS 476

Query: 297 MDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           ++ A  +F  +   DKD+I+W+ +  G+  + +     SLF + + SG +PN +TF+ +L
Sbjct: 477 LESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSIL 536

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTS-------SLIYMFCRCGAVEMAHSVFDN 407
             C     +D GL L        F+ E+N  S        +I +  R G +E A+ +   
Sbjct: 537 HACSHAGLVDEGLGL------FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRT 590

Query: 408 VSYK-NITTWNELLSGYC 424
           ++++ N   W  LL G C
Sbjct: 591 MAFRPNHAVWGALL-GSC 607



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 9/343 (2%)

Query: 28  LCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
           LC   QF S   ++ + + LA  LS   +L S   G  +HG  ++    +++ ++  LI 
Sbjct: 312 LCQMMQFES---VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALID 368

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+KC       RVF + +++    W  I+S  I NG     ++++  M      PN+  
Sbjct: 369 MYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDAT 428

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           + S++     +   +   ++H + ++        V   +++ Y+K G + +A  +F  I 
Sbjct: 429 LNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIP 488

Query: 208 S--DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
               D+  W+A+I GY   G+G  A+++   M+  G+  ++ TF + L  CS     D G
Sbjct: 489 KKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEG 548

Query: 266 RQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG-- 321
             +   ++  +++         +ID+  ++  ++ A+++   MA + +   W  L G   
Sbjct: 549 LGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCV 608

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             EN   G+ A+ +   +  G+  N+V  + +    G+  D +
Sbjct: 609 IHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAE 651


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 198/657 (30%), Positives = 319/657 (48%), Gaps = 17/657 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           ++++   P+E A  ++ ++C    A E G      A          +G ++L+   + G+
Sbjct: 85  LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 144

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
              A RVF  +   DV  WN M+GGY   G   EAL++   M++ G+  D YTF   L+ 
Sbjct: 145 TWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRS 204

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C  V D+ +GR++H  ++R      + ++NAL+ MY K   +  A KVF+ MA  D ISW
Sbjct: 205 CGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISW 264

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N +  G  EN        LF   +    +PN +T + +    G L D+    ++  LA+ 
Sbjct: 265 NAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVK 324

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            GF  +    +SLI M+   G +  A +VF  +  ++  +W  ++SGY  N      L+ 
Sbjct: 325 RGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEV 384

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           +  +  + V  +  T    +  C    +  +  ++H      GF S   + ++L++ Y  
Sbjct: 385 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAK 444

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
             ++D + E        D+ SW +M++       N EA+  F  ++ A  KP+       
Sbjct: 445 SKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAA 503

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L +CAA GA +  K IH  V++ G   E Y+ +A+ID Y KCG    A   F  +  + D
Sbjct: 504 LAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQF-CAHGAKD 562

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           V+ +N +I  +  HG    A+  F++M      P + TFV+++ ACS  G+V +G  LF 
Sbjct: 563 VVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFH 622

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           SM  +Y + P+   Y C+VD+LSR G L +A + I  MP  P   V+ +LL+GCRIH + 
Sbjct: 623 SMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHV 682

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLLDHEGVCN 778
           ELGE A++ +L L P +   HVLL                RK  RE   LDH+  C+
Sbjct: 683 ELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKG-LDHDSGCS 738



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/604 (25%), Positives = 291/604 (48%), Gaps = 9/604 (1%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L N +++M  + G      RVF +M ER++ SW ++V    + G  +  L +Y  M   G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+ +    V++ C  +     G  +H   L+    +   V  +++  YAK GDV AA 
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF S++  D   WNAMI G+   G     L +  +ML + +  +  T  +      L++
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLS 310

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D    +++HGL ++      ++  N+LI MY     M  A  VF RM  +D +SW  +  
Sbjct: 311 DITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMIS 370

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +N  P +   ++    ++   P+ +T +  L  C  L  LD+G++L  LA   GF+ 
Sbjct: 371 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMS 430

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              VT++L+ M+ +   ++ A  VF  +  K++ +W+ +++G+CFN  + + L  F ++ 
Sbjct: 431 YVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 490

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            + V+ N  TF   +  C  +   +   +IH  +++ G +  GY+ ++LI  YV  GQ  
Sbjct: 491 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTG 549

Query: 501 NSF-EF-SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            ++ +F ++GA+  D+ SW  M++  V  G+   A++ F+ +V+ GE PDE     +L +
Sbjct: 550 YAWAQFCAHGAK--DVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCA 607

Query: 559 CAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C+  G       + H    K      +   + ++D  ++ G +  A    ++   + D  
Sbjct: 608 CSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAA 667

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF-VSVMSACSHKGLVDKGCLLFKS 676
           V+  L+     H  V E  E+  K  L  L+P+ A + V +    +  G+ DK   + K+
Sbjct: 668 VWGALLNGCRIHRHV-ELGELAAKYVL-ELEPNDAGYHVLLCDLYADAGIWDKLARVRKT 725

Query: 677 MDSQ 680
           M  +
Sbjct: 726 MREK 729



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 232/496 (46%), Gaps = 20/496 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VH H+++ GF  ++ + N L+ MY+KCG      +VFD MA  + +SW  +++   
Sbjct: 213 MGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHF 272

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NGE + GL++++ M  +   PN   + SV      +    F   +H  A+K     +  
Sbjct: 273 ENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVA 332

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              S++  YA LG +  A  VF  + + D   W AMI GY   G+  +AL V + M    
Sbjct: 333 FCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNN 392

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D  T  +AL  C+ +   D+G ++H L         + + NAL++MY KS  +D A 
Sbjct: 393 VSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAI 452

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ M +KDV+SW+++  GF  N    + A  + + +L+  +PN VTF   L  C    
Sbjct: 453 EVFKCMPEKDVVSWSSMIAGFCFNHRNFE-ALYYFRHMLADVKPNSVTFIAALAACAATG 511

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    L CG   E  + ++LI ++ +CG    A + F     K++ +WN +++
Sbjct: 512 ALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 571

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQIHGAIIKT 477
           G+  +      L  F  + + G   +  TF  ++  C R    SE  ++    H    K 
Sbjct: 572 GFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWEL---FHSMTDKY 628

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTI 536
                    + ++      GQL  ++ F N      D A WGA+++              
Sbjct: 629 SIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNG-----------CR 677

Query: 537 FHSLVEAGEKPDEYIL 552
            H  VE GE   +Y+L
Sbjct: 678 IHRHVELGELAAKYVL 693



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 178/381 (46%), Gaps = 14/381 (3%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S++++  L S +    ++HG  VK GF  D+   N+LI MY+  G  G    VF  M  R
Sbjct: 301 SVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR 360

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + +SWT ++S   +NG  D  L++Y  M+ N   P++  + S +  C  +G+ + G  +H
Sbjct: 361 DAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLH 420

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A          V  ++L  YAK   +  A  VF  +   DV  W++MI G+      F
Sbjct: 421 ELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNF 480

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL     ML + +  +  TFI AL  C+       G++IH  ++R  +     + NALI
Sbjct: 481 EALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALI 539

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           D+Y+K     YA+  F     KDV+SWN +  GF  + N     S F++ +  G  P+ V
Sbjct: 540 DLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEV 599

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAH 402
           TF  LL  C +      G+  +   L     D+ ++  +L +  C      R G +  A+
Sbjct: 600 TFVALLCACSR-----GGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAY 654

Query: 403 SVFDNVSY-KNITTWNELLSG 422
           +  + +    +   W  LL+G
Sbjct: 655 NFINEMPITPDAAVWGALLNG 675



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 126/295 (42%), Gaps = 5/295 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++H      GF + + + N L+ MY+K       + VF  M E+++VSW+ +++   
Sbjct: 415 VGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFC 474

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N      L  +  M  +   PN     + +  C + GA   G  IH   L+  I    +
Sbjct: 475 FNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGY 533

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G    A   F +  + DV  WN MI G+   G G  AL+  + M+  G
Sbjct: 534 LPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIG 593

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D+ TF+  L  CS       G ++ H +  +  +  ++     ++D+  +   +  A
Sbjct: 594 ECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEA 653

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           +     M    D   W  L  G   +++  +   L  K++L    PN   + +LL
Sbjct: 654 YNFINEMPITPDAAVWGALLNGCRIHRHV-ELGELAAKYVLE-LEPNDAGYHVLL 706


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/615 (28%), Positives = 305/615 (49%), Gaps = 3/615 (0%)

Query: 147  AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            A  S++++C      + G  +H       I     +G  ++  Y   G +    R+F  I
Sbjct: 453  AYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHI 512

Query: 207  SSDD-VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
             SD+ V  WN M+  YA  G   E++ +   M   GIT + YTF   L+  + +      
Sbjct: 513  LSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGEC 572

Query: 266  RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            ++IHG + +       ++VN+LI  Y KS  +D A K+F+ + D+DV+SWN++  G   N
Sbjct: 573  KRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMN 632

Query: 326  KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                     F + ++     +  T    +  C  +  L LG  L    +   F  E    
Sbjct: 633  GFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFN 692

Query: 386  SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
            ++L+ M+ +CG +  A   F+ +  K + +W  L++ Y       D ++ F  +   GV 
Sbjct: 693  NTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752

Query: 446  VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
             +  +   V+  C    +      +H  I K   + C  + ++L+  Y   G ++ ++  
Sbjct: 753  PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812

Query: 506  SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
             +     D+ SW  M+         +EA+ +F  + +   +PD   +  +L +C ++ A 
Sbjct: 813  FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMACLLPACGSLAAL 871

Query: 566  QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
            +  + IH  +++ G+++E++VA+A+ID Y KCG +  AR+ FD      D+I +  +I  
Sbjct: 872  EIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDM-IPEKDLITWTVMISG 930

Query: 626  YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
               HGL +EA+  F KM++A ++P + TF S++ ACSH GL+++G   F SM S+  M+P
Sbjct: 931  CGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEP 990

Query: 686  SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
              + Y C+VD+L+R G L  A ++IE MP +P  T++ +LL GCRIH + EL E  +E +
Sbjct: 991  KLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHV 1050

Query: 746  LLLLPKNDAAHVLLS 760
              L P N   +VLL+
Sbjct: 1051 FELEPDNAGYYVLLA 1065



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/635 (23%), Positives = 281/635 (44%), Gaps = 17/635 (2%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV-SWTLIVSAAI 121
            G  VH  I   G   +  L   L+ MY  CG    G R+FD +   N V  W L++S   
Sbjct: 470  GKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYA 529

Query: 122  QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            + G++   + ++  M+  G   N +    ++K   ++G       IH    K+       
Sbjct: 530  KIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNT 589

Query: 182  VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            V  S++  Y K G+V +A ++F  +   DV  WN+MI G    G+   AL     ML   
Sbjct: 590  VVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILR 649

Query: 242  ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
            + +D  T +N++  C+ V    +GR +HG  +++     +   N L+DMY K   ++ A 
Sbjct: 650  VGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAI 709

Query: 302  KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            + FE+M  K V+SW +L   +           LF++    G  P+  + + +L  C    
Sbjct: 710  QAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGN 769

Query: 362  DLDLGLQLQCLALHCGFLDEEN------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             LD G  +        ++ + N      V+++L+ M+ +CG++E A+ VF  +  K+I +
Sbjct: 770  SLDKGRDVH------NYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVS 823

Query: 416  WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
            WN ++ GY  N    + LK F  + +     +G T   ++  C      ++   IHG I+
Sbjct: 824  WNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCIL 882

Query: 476  KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            + G+SS  ++ ++LI  YV  G L ++    +     D+ +W  M+S     G  +EA+ 
Sbjct: 883  RNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIA 942

Query: 536  IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAY 594
             F  +  AG KPDE    +IL +C+  G         +  + +     ++   + ++D  
Sbjct: 943  TFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLL 1002

Query: 595  AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            A+ G++  A    +      D  ++  L+     H  V  A ++ +   +  L+P  A +
Sbjct: 1003 ARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAE--HVFELEPDNAGY 1060

Query: 655  VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
              +++    +    +     +    + G++ SP C
Sbjct: 1061 YVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGC 1095



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 196/383 (51%), Gaps = 5/383 (1%)

Query: 43   DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
            D   L  S++   N+ S  LG  +HG  VK  F+ ++   N L+ MYSKCG     ++ F
Sbjct: 653  DLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAF 712

Query: 103  DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            ++M ++ +VSWT +++A ++ G +D  ++++ +M++ G  P+ +++ SV+  C    + +
Sbjct: 713  EKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLD 772

Query: 163  FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
             G  +H +  K  +     V  ++++ YAK G +  A  VF  I   D+  WN MIGGY+
Sbjct: 773  KGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYS 832

Query: 223  HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                  EAL + + M  E    D  T    L  C  +A  +IGR IHG I+R+     + 
Sbjct: 833  KNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELH 891

Query: 283  IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
            + NALIDMY+K   + +A  +F+ + +KD+I+W  +  G   +    +  + F K  ++G
Sbjct: 892  VANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAG 951

Query: 343  SRPNHVTFSILLRQCGK--LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
             +P+ +TF+ +L  C    LL+   G     +   C    +    + ++ +  R G +  
Sbjct: 952  IKPDEITFTSILYACSHSGLLNEGWGF-FNSMISECNMEPKLEHYACMVDLLARTGNLSK 1010

Query: 401  AHSVFDNVSYK-NITTWNELLSG 422
            A+++ + +  K + T W  LL G
Sbjct: 1011 AYNLIETMPIKPDATIWGALLCG 1033



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/496 (23%), Positives = 236/496 (47%), Gaps = 15/496 (3%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D   + + LQ C+       G+ +H +I  + +     +   L+ MY+    +    ++
Sbjct: 449 LDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRI 508

Query: 304 FER-MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           F+  ++D  V  WN +   +++  +  ++  LF K    G   N  TFS +L+    L  
Sbjct: 509 FDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGR 568

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           +    ++       GF     V +SLI  + + G V+ AH +FD +  +++ +WN ++SG
Sbjct: 569 VGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISG 628

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
              N      L+ F  +    V V+  T    V  C    +  +   +HG  +K  FS  
Sbjct: 629 CVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSRE 688

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
               ++L+  Y   G L+++ +      +  + SW ++++A V +G   +A+ +F+ +  
Sbjct: 689 VMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMES 748

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PD Y + ++L++CA   +  + + +H ++ K      + V++A++D YAKCG ++ 
Sbjct: 749 KGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEE 808

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A + F Q     D++ +NT+I  Y+ + L +EA+++F +M+  + +P   T   ++ AC 
Sbjct: 809 AYLVFSQ-IPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES-RPDGITMACLLPACG 866

Query: 663 HKGLVD-----KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
               ++      GC+L     S+  +  +      L+DM  + G L  A+ + +++P + 
Sbjct: 867 SLAALEIGRGIHGCILRNGYSSELHVANA------LIDMYVKCGSLVHARLLFDMIP-EK 919

Query: 718 SPTVYRSLLSGCRIHG 733
               +  ++SGC +HG
Sbjct: 920 DLITWTVMISGCGMHG 935



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 89/182 (48%), Gaps = 2/182 (1%)

Query: 41   RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
            R D I +A  L    +L +  +G  +HG I++ G+++++ + N LI MY KCG       
Sbjct: 852  RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARL 911

Query: 101  VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            +FD + E++L++WT+++S    +G  +  +  +  M+  G  P+E    S++  C   G 
Sbjct: 912  LFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGL 971

Query: 161  SEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
               G+   +    +  +E        +++  A+ G+++ A  +  ++    D   W A++
Sbjct: 972  LNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALL 1031

Query: 219  GG 220
             G
Sbjct: 1032 CG 1033


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 170/582 (29%), Positives = 294/582 (50%), Gaps = 7/582 (1%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +   +++ Y   G    A  VF  I   D   W  ++  Y      FE +     ++  G
Sbjct: 90  IATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHG 149

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D   F  AL+ C+ V D D G++IH  I++     ++ ++  L+DMY K   +  ++
Sbjct: 150 FGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNV-VLTGLLDMYAKCGEIKSSY 208

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVFE +  ++V+ W ++  G+ +N    +   LF++   +    N  T+  L+  C KL 
Sbjct: 209 KVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLR 268

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G       +  G      + +SL+ M+ +CG +  A  VF+  S+ ++  W  ++ 
Sbjct: 269 ALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 328

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N    + L  F  +   G++ N  T   V+  C    N ++   IHG  IK G   
Sbjct: 329 GYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWD 388

Query: 482 CGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              + ++L+  Y   +   D  + F   +E+ D+ +W +++S     G  HEA+ +FH +
Sbjct: 389 TN-VANALVHMYAKCYQNRDAKYVFEMESEK-DIVAWNSIISGFSQNGSIHEALFLFHRM 446

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCG 598
                 P+   + ++ ++CA++G+     S+H + +KLGF  ++ V+V +A++D YAKCG
Sbjct: 447 NTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 506

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           D + AR+ FD +    + I ++ +I  Y   G    ++E+F++M     +P+++TF SV+
Sbjct: 507 DAESARLIFD-TIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVL 565

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH G+V++G   F SM   Y   PS   Y C+VDML+R G LE A  +IE MP QP 
Sbjct: 566 SACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 625

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              + + L GC +H   +LGE   +K+L L P + + +VL+S
Sbjct: 626 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVS 667



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 171/687 (24%), Positives = 307/687 (44%), Gaps = 49/687 (7%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           +N   S ++    P FL   LS   N+ S     Q HG +   G   DI +   L+++Y 
Sbjct: 45  DNDESSLNYAASRPCFLL--LSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYG 99

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
             GY      VFD++ E +   W +I+     N E    +K Y  +  +GF  ++     
Sbjct: 100 SFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSK 159

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +K C  +   + G  IHC  +K+    N  V   +L+ YAK G++ ++ +VF  I+  +
Sbjct: 160 ALKACTEVQDLDNGKKIHCQIVKVPSFDN-VVLTGLLDMYAKCGEIKSSYKVFEDITLRN 218

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V CW +MI GY       E L + + M    +  ++YT+   +  C+ +     G+  HG
Sbjct: 219 VVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHG 278

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +I+S +E S  +V +L+DMY+K   +  A +VF   +  D++ W  +  G++ N +  +
Sbjct: 279 CLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 338

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             SLF K    G +PN VT + +L  CG + +L+LG  +  L++  G  D  NV ++L++
Sbjct: 339 ALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWD-TNVANALVH 397

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +C     A  VF+  S K+I  WN ++SG+  N    + L  F  +    V  NG T
Sbjct: 398 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVT 457

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGF--SSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
              +   C    +  +   +H   +K GF  SS  ++ ++L+  Y   G  +++    + 
Sbjct: 458 VASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDT 517

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            E  +  +W AM+     QG    ++ +F  +++  +KP+E    ++L++C+  G     
Sbjct: 518 IEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEG 577

Query: 569 KSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
           K     + K   F       + ++D  A+ G+++                          
Sbjct: 578 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE-------------------------- 611

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
                 +A++I +KM    +QP    F + +  C      D G ++ K M     + P  
Sbjct: 612 ------QALDIIEKMP---IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM---LDLHPDD 659

Query: 688 DCYGCLV-DMLSRNGYLEDAKHVIEIM 713
             Y  LV ++ + +G    AK V  +M
Sbjct: 660 ASYYVLVSNLYASDGRWSQAKEVRNLM 686


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 180/580 (31%), Positives = 303/580 (52%), Gaps = 13/580 (2%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L+  AKL  V  A +VF  I    +  WNA+I G A  G    A  +   M   G+  
Sbjct: 117 TLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKA 176

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           DKYTF   L  CSL   FD GR +H ++I+S      S+VN+LI MY K   +  A +VF
Sbjct: 177 DKYTFATMLSLCSLEL-FDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVF 235

Query: 305 ERMAD---KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           E   +   +D +S+N +  GF+  +       +F         P  VTF  ++  C    
Sbjct: 236 EEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS--- 292

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G Q Q  A+  GF+    V ++++ M+   G V    ++F+ +  +++ +WN ++S
Sbjct: 293 SLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVS 352

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +     + + + ++  +   G+E +  T+  ++     +++ Q+V  IH  + K+G   
Sbjct: 353 MFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAA---TDSLQVVEMIHSLLCKSGLVK 409

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+ +Y   G++  +F+  +G     + SW +++S  +  GH  + +  F +L+
Sbjct: 410 I-EVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALL 468

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KP+ Y L  +L+ C+++ A    K +H ++++ GF++EV + +A++  YAKCG + 
Sbjct: 469 STQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLD 528

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSA 660
            A   FD +    D I +N +I AYA HG   EA+  F+ M+ +  ++P QATF SV+SA
Sbjct: 529 KALRVFD-AMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSA 587

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLVD G  +F +M   YG  PS D + C+VD+L R+GYL++A+ VI+   F     
Sbjct: 588 CSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSN 647

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  SL S C  HGN  LG   +  +L     N + +VLLS
Sbjct: 648 ICWSLFSACAAHGNLGLGRTVARLILERDHNNPSVYVLLS 687



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 146/628 (23%), Positives = 269/628 (42%), Gaps = 19/628 (3%)

Query: 71  VKLGFTN----DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           VKL F      D +    L++  +K       L+VFD + + ++  W  +++   + G  
Sbjct: 100 VKLTFQEIDCPDAYSWTTLLSACAKLDSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNR 159

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
           D    ++ DM   G   +++   +++ +C S+   ++G  +H   +K        V  S+
Sbjct: 160 DFAFGLFRDMNKMGVKADKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSL 218

Query: 187 LNFYAKLGDVAAAERVFYSIS---SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           +  Y K G V  A  VF       S D   +NAMI G+A      +A  +   M      
Sbjct: 219 ITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFD 278

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
             + TF++ +  CS       G Q     I+      +++ NA++ MY     +     +
Sbjct: 279 PTEVTFVSVMSSCS---SLRAGCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNI 335

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE M ++DV+SWN +   F +     +    + K    G  P+  T+  LL     L  +
Sbjct: 336 FEGMEERDVVSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVV 395

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           ++   L C +   G +  E V ++L+  +CR G ++ A  +F  V YK++ +WN ++SG+
Sbjct: 396 EMIHSLLCKS---GLVKIE-VLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGF 451

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      L+ F  +  + V+ N  +   V+  C          Q+HG I++ GFSS  
Sbjct: 452 LMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEV 511

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-VE 542
            + ++L+  Y   G LD +    +     D  +W A++SA    G   EAV  F ++   
Sbjct: 512 SLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTS 571

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIK 601
            G KPD+    ++L++C+  G       I   ++K+ GF   V   S ++D   + G + 
Sbjct: 572 PGIKPDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLD 631

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A       +      +  +L  A A HG +     +  ++ L     + + +V + + C
Sbjct: 632 EAERVIKSGYFGAHSNICWSLFSACAAHGNLGLGRTV-ARLILERDHNNPSVYVLLSNIC 690

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           +  G  ++   L + M  ++G    P C
Sbjct: 691 AAAGQWEEAANL-REMMREFGTIKQPGC 717



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 198/428 (46%), Gaps = 22/428 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D    A  LSL  +L+    G  VH  ++K GF     + N+LI MY KCG      
Sbjct: 174 VKADKYTFATMLSLC-SLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDAC 232

Query: 100 RVFDEMAE---RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
            VF+E  E   R+ VS+  ++         +    ++ DM+   F P E    SVM  C 
Sbjct: 233 EVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS 292

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLN-----FYAKLGDVAAAERVFYSISSDDV 211
           S+ A        C A    I K  FVGC  +N      Y+  G+V   + +F  +   DV
Sbjct: 293 SLRAG-------CQAQSQAI-KMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDV 344

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN M+  +       EA+     M  EGI  D++T+ + L          +   IH L
Sbjct: 345 VSWNIMVSMFLQENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATD---SLQVVEMIHSL 401

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           + +S +   I ++NAL+  Y +   +  AF++F  +  K +ISWN++  GF  N +P Q 
Sbjct: 402 LCKSGL-VKIEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQG 460

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
              F   + +  +PN  + S++L  C  +  +  G Q+    L  GF  E ++ ++L+ M
Sbjct: 461 LEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTM 520

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCT 450
           + +CG+++ A  VFD +  ++  TWN ++S Y  +    + +  F  +  S G++ +  T
Sbjct: 521 YAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQAT 580

Query: 451 FFYVVETC 458
           F  V+  C
Sbjct: 581 FTSVLSAC 588



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 173/347 (49%), Gaps = 6/347 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q     +K+GF   + + N ++ MYS  G       +F+ M ER++VSW ++VS  +Q
Sbjct: 297 GCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQ 356

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
               +  +  Y+ M+  G  P+EF  GS++    S+   E  +S+ C +  ++IE    V
Sbjct: 357 ENLEEEAMLSYLKMRREGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLVKIE----V 412

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y + G +  A ++F  +    +  WN++I G+   G+  + L   S++L   +
Sbjct: 413 LNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQV 472

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + Y+    L  CS ++    G+Q+HG I+R      +S+ NAL+ MY K   +D A +
Sbjct: 473 KPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALR 532

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLL 361
           VF+ M ++D I+WN +   ++++    +    F     S G +P+  TF+ +L  C    
Sbjct: 533 VFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAG 592

Query: 362 DLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +D G+++   +    GF+   +  S ++ +  R G ++ A  V  +
Sbjct: 593 LVDDGIRIFDTMVKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKS 639



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 19/303 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  + K G    I + N L++ Y + G      ++F  +  ++L+SW  I+S  + NG 
Sbjct: 398 IHSLLCKSGLVK-IEVLNALVSAYCRHGKIKRAFQIFSGVPYKSLISWNSIISGFLMNGH 456

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
              GL+ +  + +    PN +++  V+ +C SM A   G  +H + L+        +G +
Sbjct: 457 PLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGNA 516

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITM 244
           ++  YAK G +  A RVF ++   D   WNA+I  YA  G G EA+    +M    GI  
Sbjct: 517 LVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIKP 576

Query: 245 DKYTFINALQGCS---LVAD----FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           D+ TF + L  CS   LV D    FD   +++G +       S+   + ++D+  +S  +
Sbjct: 577 DQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVP------SVDHFSCIVDLLGRSGYL 630

Query: 298 DYAFKVFER--MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           D A +V +         I W +LF   + + N G   ++  + IL     N   + +L  
Sbjct: 631 DEAERVIKSGYFGAHSNICW-SLFSACAAHGNLGLGRTV-ARLILERDHNNPSVYVLLSN 688

Query: 356 QCG 358
            C 
Sbjct: 689 ICA 691



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 26  HRLCGNNQFCS--DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           H L G  QF +   + ++ +   L+  LS+  ++ +   G QVHG+I++ GF++++ L N
Sbjct: 456 HPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMSAMSHGKQVHGYILRHGFSSEVSLGN 515

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFM 142
            L+ MY+KCG     LRVFD M ER+ ++W  I+SA  Q+G  +  +  +  M+T+ G  
Sbjct: 516 ALVTMYAKCGSLDKALRVFDAMVERDTITWNAIISAYAQHGRGEEAVCCFEAMQTSPGIK 575

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAE 200
           P++    SV+  C   G  + G  I    +K+   +       C +++   + G +  AE
Sbjct: 576 PDQATFTSVLSACSHAGLVDDGIRIFDTMVKVYGFVPSVDHFSC-IVDLLGRSGYLDEAE 634

Query: 201 RVFYS--ISSDDVGCWNAMIGGYAHCGYGF 228
           RV  S    +    CW+      AH   G 
Sbjct: 635 RVIKSGYFGAHSNICWSLFSACAAHGNLGL 664


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/580 (28%), Positives = 301/580 (51%), Gaps = 13/580 (2%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K  ++  A ++F  +   ++  +N++I GY   G+  +A+ +        + +DK+T+
Sbjct: 92  YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             AL  C    D D+G  +HGL++ + +   + ++N LIDMY K   +D A  +F+R  +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +D +SWN+L  G+       +  +L  K    G          +L+ C   ++L+ G   
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFIE 269

Query: 370 QCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY- 423
           + +A+HC     G   +  V ++L+ M+ + G+++ A  +F  +  KN+ T+N ++SG+ 
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329

Query: 424 ----CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
                 +   ++  K F ++   G+E +  TF  V++ C  ++  +   QIH  I K  F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            S  +I S+LI+ Y   G  ++  +      + D+ASW +M+   V       A  +F  
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L  +  +P+EY +  ++++CA   A    + I  + IK G +    V ++ I  YAK G+
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  A   F +  N  DV  Y+ +I + A HG  +EA+ IF+ MK   ++P+Q  F+ V+ 
Sbjct: 510 MPLANQVFIEVQNP-DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H GLV +G   F+ M + Y + P+   + CLVD+L R G L DA+++I    FQ  P
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             +R+LLS CR++ +  +G+  +E+L+ L P+   ++VLL
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 237/509 (46%), Gaps = 8/509 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S VLG   HGH++K      ++L NNL+ MY KC   G+  ++FD M ERN++S+  ++S
Sbjct: 62  SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              Q G ++  ++++++ +      ++F     +  C      + G  +H   +   + +
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
             F+   +++ Y+K G +  A  +F      D   WN++I GY   G   E LN+++ M 
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241

Query: 239 FEGITMDKYTFINALQGCSLVAD---FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +G+ +  Y   + L+ C +  +    + G  IH    +  +E  I +  AL+DMY K+ 
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS-----LFHKFILSGSRPNHVTF 350
            +  A K+F  M  K+V+++N +  GF +       AS     LF      G  P+  TF
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S++L+ C     L+ G Q+  L     F  +E + S+LI ++   G+ E     F + S 
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 421

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++I +W  ++  +  N         F  ++ S +     T   ++  C          QI
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
            G  IK+G  +   + +S I  Y   G +  + +     +  D+A++ AM+S+L   G  
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +EA+ IF S+   G KP++     +L +C
Sbjct: 542 NEALNIFESMKTHGIKPNQQAFLGVLIAC 570



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L   P   +  L      K+   G Q+H  I K  F +D F+ + LI +Y+  G    G+
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F   +++++ SWT ++   +QN + +    ++  + ++   P E+ V  +M  C    
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  I  +A+K  I+    V  S ++ YAK G++  A +VF  + + DV  ++AMI 
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A  G   EALN+  SM   GI  ++  F+  L  C
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 43/285 (15%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R +   ++  +S   +  +   G Q+ G+ +K G      ++ + I+MY+K G    
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             +VF E+   ++ +++ ++S+  Q+G  +  L ++  MKT+G  PN+ A   V+  C  
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCH 572

Query: 158 MGASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
            G    G     C     RI  N      +++   + G ++ AE +  S    D    W 
Sbjct: 573 GGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWR 632

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           A+                                   L  C +  D  IG+++   ++  
Sbjct: 633 AL-----------------------------------LSSCRVYKDSVIGKRVAERLMEL 657

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISW 315
           E E S S V  L ++Y  S     A +V E M D+ V     +SW
Sbjct: 658 EPEASGSYV-LLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 197/657 (29%), Positives = 318/657 (48%), Gaps = 17/657 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           ++++   P+E A  ++ ++C    A E G      A          +G ++L+   + G+
Sbjct: 79  LESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGE 138

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
              A RVF  +   DV  WN M+GGY   G   EAL++   M++ G+  D YTF   L+ 
Sbjct: 139 TWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRS 198

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C  V D+ +GR++H  ++R      + ++NAL+ MY K   +  A KVF+ M   D ISW
Sbjct: 199 CGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISW 258

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N +  G  EN        LF   +    +PN +T + +    G L D+    ++  LA+ 
Sbjct: 259 NAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVK 318

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            GF  +    +SLI M+   G +  A +VF  +  ++  TW  ++SGY  N      L+ 
Sbjct: 319 RGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEV 378

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           +  +  + V  +  T    +  C    +  +  ++H      GF S   + +++++ Y  
Sbjct: 379 YALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAK 438

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
             ++D + E        D+ SW +M++       N EA+  F  ++ A  KP+       
Sbjct: 439 SKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML-ADVKPNSVTFIAA 497

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L +CAA GA +  K IH  V++ G   E Y+ +A+ID Y KCG    A   F  +  + D
Sbjct: 498 LAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQF-CAHGAKD 556

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           V+ +N +I  +  HG    A+  F++M      P + TFV+++ ACS  G+V +G  LF 
Sbjct: 557 VVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFH 616

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           SM  +Y + P+   Y C+VD+LSR G L +A + I  MP  P   V+ +LL+GCRIH + 
Sbjct: 617 SMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHV 676

Query: 736 ELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLLDHEGVCN 778
           ELGE A++ +L L P +   HVLL                RK  RE   LDH+  C+
Sbjct: 677 ELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKG-LDHDSGCS 732



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/577 (26%), Positives = 280/577 (48%), Gaps = 8/577 (1%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L N +++M  + G      RVF +M ER++ SW ++V    ++G  D  L +Y  M   G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P+ +    V++ C  +     G  +H   L+    +   V  +++  YAK GDV AA 
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF S++  D   WNAMI G+   G     L +  +ML + +  +  T  +      L++
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLS 304

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D    +++HGL ++      ++  N+LI MY     M  A  VF RM  +D ++W  +  
Sbjct: 305 DVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMIS 364

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G+ +N  P +   ++    ++   P+ +T +  L  C  L  LD+G++L  LA   GF+ 
Sbjct: 365 GYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFIS 424

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              VT++++ M+ +   ++ A  VF  +  K++ +W+ +++G+CFN  + + L  F ++ 
Sbjct: 425 YIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHML 484

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            + V+ N  TF   +  C  +   +   +IH  +++ G    GY+ ++LI  YV  GQ  
Sbjct: 485 -ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543

Query: 501 NSF-EF-SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            ++ +F ++GA+  D+ SW  M++  V  GH   A++ F+ +V+ GE PDE     +L +
Sbjct: 544 YAWAQFCAHGAK--DVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCA 601

Query: 559 CAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           C+  G       + H    K      +   + ++D  ++ G +  A    ++   + D  
Sbjct: 602 CSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAA 661

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           V+  L+     H  V E  E+  K  LA L+P+ A +
Sbjct: 662 VWGALLNGCRIHRHV-ELGELAAKYVLA-LEPNDAGY 696



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 230/497 (46%), Gaps = 20/497 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VH H+++ GF  ++ + N L+ MY+KCG      +VFD M   + +SW  +++   
Sbjct: 207 MGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHF 266

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NGE + GL++++ M  +   PN   + SV      +    F   +H  A+K     +  
Sbjct: 267 ENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVA 326

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              S++  YA LG +  A  VF  + + D   W AMI GY   G+  +AL V + M    
Sbjct: 327 FCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNN 386

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ D  T  +AL  C+ +   D+G ++H L         I + NA+++MY KS  +D A 
Sbjct: 387 VSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAI 446

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ M +KDV+SW+++  GF  N    +    F + +L+  +PN VTF   L  C    
Sbjct: 447 EVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYF-RHMLADVKPNSVTFIAALAACAATG 505

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++    L CG   E  + ++LI ++ +CG    A + F     K++ +WN +++
Sbjct: 506 ALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIA 565

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQIHGAIIKT 477
           G+  +      L  F  + + G   +  TF  ++  C R    SE  ++    H    K 
Sbjct: 566 GFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWEL---FHSMTEKY 622

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTI 536
                    + ++      GQL  ++ F N      D A WGA+++              
Sbjct: 623 SIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNG-----------CR 671

Query: 537 FHSLVEAGEKPDEYILG 553
            H  VE GE   +Y+L 
Sbjct: 672 IHRHVELGELAAKYVLA 688



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 176/376 (46%), Gaps = 4/376 (1%)

Query: 50  SLSLSENLKSRV-LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           S++++  L S V    ++HG  VK GF  D+   N+LI MY+  G       VF  M  R
Sbjct: 295 SVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR 354

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + ++WT ++S   +NG  D  L++Y  M+ N   P++  + S +  C  +G+ + G  +H
Sbjct: 355 DAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLH 414

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             A          V  ++L  YAK   +  A  VF  +   DV  W++MI G+      F
Sbjct: 415 ELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNF 474

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL     ML + +  +  TFI AL  C+       G++IH  ++R  +E    + NALI
Sbjct: 475 EALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALI 533

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           D+Y+K     YA+  F     KDV+SWN +  GF  + +     S F++ +  G  P+ V
Sbjct: 534 DLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEV 593

Query: 349 TFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           TF  LL  C +   +  G +L   +      +      + ++ +  R G +  A++  + 
Sbjct: 594 TFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINE 653

Query: 408 VSY-KNITTWNELLSG 422
           +    +   W  LL+G
Sbjct: 654 MPITPDAAVWGALLNG 669



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 130/295 (44%), Gaps = 5/295 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G ++H      GF + I + N ++ MY+K       + VF  M E+++VSW+ +++   
Sbjct: 409 VGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFC 468

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N      L  +  M  +   PN     + +  C + GA   G  IH   L+  IE   +
Sbjct: 469 FNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGY 527

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G    A   F +  + DV  WN MI G+   G+G  AL+  + M+  G
Sbjct: 528 LPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIG 587

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D+ TF+  L  CS       G ++ H +  +  +  ++     ++D+  ++  +  A
Sbjct: 588 ECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEA 647

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           +     M    D   W  L  G   +++  +   L  K++L+   PN   + +LL
Sbjct: 648 YNFINEMPITPDAAVWGALLNGCRIHRHV-ELGELAAKYVLA-LEPNDAGYHVLL 700


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 280/526 (53%), Gaps = 12/526 (2%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +K  ++  LQ C     +   + +HG ++++    +  +++ L+++Y K   M+ A +VF
Sbjct: 63  EKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVF 122

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E M  ++V++W TL  GF +N  P     +F + + +GS P+  T S +L  C  L  L 
Sbjct: 123 ENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLK 182

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q     +      + +V S+L  ++ +CG +E A   F  +  KN+ +W   +S   
Sbjct: 183 LGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACG 242

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      L+ F  +    ++ N  T    +  CC   + ++  Q+    IK G+ S   
Sbjct: 243 DNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLR 302

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ-----------GHNHEA 533
           + +SL+  Y+  G +  +  F N  + + M +W AM++                    EA
Sbjct: 303 VRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEA 362

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + IF  L ++G KPD + L ++L+ C+ + A ++ + IH   IK GF ++V V++++I  
Sbjct: 363 LKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 422

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y KCG I+ A  AF +  ++  +I + ++I  ++ HG+  +A+ IF+ M LA ++P+  T
Sbjct: 423 YNKCGSIERASKAFLE-MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVT 481

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV V+SACSH G+V +    F+ M  +Y ++P  D Y C+VDM  R G LE A + I+ M
Sbjct: 482 FVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKM 541

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++PS  ++ + ++GCR HGN ELG +ASE+LL L PK+   +VLL
Sbjct: 542 NYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLL 587



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 211/408 (51%), Gaps = 12/408 (2%)

Query: 63  GTQ-VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           GTQ VHGH++K G  ++ F+ + L+ +Y+KCG      RVF+ M  RN+V+WT ++   +
Sbjct: 82  GTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFV 141

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN +    + ++ +M   G  P+ + + +V+  C S+ + + G   H + +K  ++ +  
Sbjct: 142 QNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTS 201

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++ + Y+K G +  A + F  I   +V  W + +      G   + L +   M+ E 
Sbjct: 202 VGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISED 261

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +++T  +AL  C  +   ++G Q+  L I+   E ++ + N+L+ +Y+KS  +  A 
Sbjct: 262 IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAH 321

Query: 302 KVFERMADKDVISWNTLFGGFSE-------NKNPGQTAS----LFHKFILSGSRPNHVTF 350
           + F RM D  +++WN +  G ++       N +  Q  S    +F K   SG +P+  T 
Sbjct: 322 RFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTL 381

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S +L  C ++L ++ G Q+    +  GFL +  V++SLI M+ +CG++E A   F  +S 
Sbjct: 382 SSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMST 441

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + +  W  +++G+  +      L  F ++  +GV  N  TF  V+  C
Sbjct: 442 RTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSAC 489



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 182/389 (46%), Gaps = 13/389 (3%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+  L    +L+S  LG Q H +I+K     D  + + L ++YSKCG     L+ F  + 
Sbjct: 168 LSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIR 227

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N++SWT  VSA   NG    GL+++V+M +    PNEF + S +  C  + + E G  
Sbjct: 228 EKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQ 287

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH--- 223
           +    +K   E N  V  S+L  Y K G +  A R F  +    +  WNAMI G+A    
Sbjct: 288 VCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMME 347

Query: 224 --------CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
                   C  G EAL + S +   G+  D +T  + L  CS +   + G QIH   I++
Sbjct: 348 LTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 407

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
                + +  +LI MY K   ++ A K F  M+ + +I+W ++  GFS++    Q   +F
Sbjct: 408 GFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIF 467

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
               L+G RPN VTF  +L  C     +   L   + +          +    ++ MF R
Sbjct: 468 EDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVR 527

Query: 395 CGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
            G +E A +    ++Y+     W+  ++G
Sbjct: 528 LGRLEQALNFIKKMNYEPSEFIWSNFIAG 556



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 141/302 (46%), Gaps = 27/302 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +   L  +LS    + S  LGTQV    +K G+ +++ ++N+L+ +Y K G+     
Sbjct: 262 IKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAH 321

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-----------GLKMYVDMKTNGFMPNEFAV 148
           R F+ M + ++V+W  +++   Q  E               LK++  +  +G  P+ F +
Sbjct: 322 RFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTL 381

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            SV+ VC  M A E G  IH   +K     +  V  S+++ Y K G +  A + F  +S+
Sbjct: 382 SSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMST 441

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD---- 261
             +  W +MI G++  G   +AL++   M   G+  +  TF+  L  CS   +V+     
Sbjct: 442 RTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNY 501

Query: 262 FDIGRQIHGL-IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
           F+I ++ + +  +    EC       ++DM+++   ++ A    ++M  +     W+   
Sbjct: 502 FEIMQKKYKIKPVMDHYEC-------MVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFI 554

Query: 320 GG 321
            G
Sbjct: 555 AG 556



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 63/124 (50%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           + S ++ D   L+  LS+   + +   G Q+H   +K GF +D+ +  +LI+MY+KCG  
Sbjct: 370 NQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSI 429

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               + F EM+ R +++WT +++   Q+G     L ++ DM   G  PN      V+  C
Sbjct: 430 ERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSAC 489

Query: 156 VSMG 159
              G
Sbjct: 490 SHAG 493



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E  E+ ++     +L  C    +Y  T+ +H  V+K G +   +V S +++ YAKCG+++
Sbjct: 57  EGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNME 116

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  F+     N V+ + TL++ +  +     A+ +F +M  A   PS  T  +V+ AC
Sbjct: 117 DARRVFENMPRRN-VVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           S    +  G   F +   +Y +         L  + S+ G LEDA
Sbjct: 176 SSLQSLKLGD-QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDA 219


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 184/640 (28%), Positives = 326/640 (50%), Gaps = 9/640 (1%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+ +  +K+   M+      +E    +++++C    A E G  ++  AL      +  +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF-EG 241
           G + L  + + G++  A  VF  +S  ++  WN ++GGYA  GY  EA+ +   ML+  G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D YTF   L+ C  + D   GR++H  ++R   E  I +VNALI MY+K   +  A 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+RM  +D+ISWN +  G+ EN    +   LF         P+ +T + ++  C  L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D  LG  +    +  GF  + +V +SL  M+   G+   A  +F  +  K+I +W  ++S
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMIS 371

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY +N      + T+  + +  V+ +  T   V+  C    +     ++H   IK    S
Sbjct: 372 GYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y     +D + +  +   R ++ SW ++++ L       EA+  F  + 
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM- 490

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +   +P+   L   L +CA IGA    K IH  V++ G   + ++ +A++D Y +CG + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 602 GARMAFDQSFNSN--DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
              +A++Q FNS   DV  +N L+  Y+  G  S  +E+FD+M  A ++P + TF+S++ 
Sbjct: 551 ---IAWNQ-FNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLC 606

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
            C    +V +G + F  M+ +YG+ P+   Y C+VD+L R G L++A   I+ MP  P P
Sbjct: 607 GCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDP 665

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            V+ +LL+ CRIH N +LGE +++++  L   +   ++LL
Sbjct: 666 AVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILL 705



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 261/555 (47%), Gaps = 8/555 (1%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTN 139
           L N  +AM+ + G       VF +M+ERNL SW ++V    + G FD  + +Y  M    
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVG 190

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P+ +    V++ C  +     G  +H   ++   E +  V  +++  Y K GDV +A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             +F  +   D+  WNAMI GY   G G E L +  +M    +  D  T  + +  C L+
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            D  +GR IH  +I +     IS+ N+L  MY+ +     A K+F RM  KD++SW T+ 
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G+  N  P +    +        +P+ +T + +L  C  L DLD G++L  LA+    +
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN--CCDADVLKTFC 437
               V ++LI M+ +C  ++ A  +F N+  KN+ +W  +++G   N  C +A +   F 
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI---FF 487

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
              +  ++ N  T    +  C R        +IH  +++TG     ++ ++L+  YV  G
Sbjct: 488 RQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           +++ ++   N +++ D++SW  +++    +G     V +F  +V+A  +PDE    ++L 
Sbjct: 548 RMNIAWNQFN-SQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLC 606

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
            C      ++       + + G    +   + V+D   + G+++ A     +   + D  
Sbjct: 607 GCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPA 666

Query: 618 VYNTLIMA-YAHHGL 631
           V+  L+ A   HH +
Sbjct: 667 VWGALLNACRIHHNI 681



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 124/302 (41%), Gaps = 52/302 (17%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H+++ G   D FL N L+ MY +CG        F+   ++++ SW ++++   +
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQ-KKDVSSWNILLTGYSE 575

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VSMG------ASEFGYS----- 166
            G+  + ++++  M      P+E    S++  C     V  G        E+G +     
Sbjct: 576 RGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKH 635

Query: 167 ----------------IHCFALKIRIEKNPFVGCSVLN-----FYAKLGDVAAAERVFYS 205
                            H F  K+ +  +P V  ++LN         LG+++A +R+F  
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSA-QRIF-E 693

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +    VG +  +   YA CG   E   V   M   G+T+D         GCS V   ++ 
Sbjct: 694 LDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD--------AGCSWV---EVK 742

Query: 266 RQIHGLIIRSEVECSISIVNALID-MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            ++H  +   +       +N ++D  Y K S +           D+  IS + +F G SE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMDETEISRDEIFCGHSE 802

Query: 325 NK 326
            K
Sbjct: 803 RK 804


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/628 (26%), Positives = 320/628 (50%), Gaps = 11/628 (1%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M T   +P       +++ C++  + + G  IH   + + ++ + F+  +++N Y     
Sbjct: 1   MDTRKLLP-------LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHL 53

Query: 196 VAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINAL 253
              A+ VF ++ +  ++  WN ++ GY       EAL +   +L +  +  D YT+ +  
Sbjct: 54  YDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVF 113

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + C  +  + +G+ IH  +I++ +   I + ++L+ MY K +  + A  +F  M +KDV 
Sbjct: 114 KACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVA 173

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
            WNT+   + ++ N       F      G  PN VT +  +  C +LLDL+ G+++    
Sbjct: 174 CWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEEL 233

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           ++ GFL +  ++S+L+ M+ +CG +EMA  +F+ +  K +  WN ++SGY         +
Sbjct: 234 INSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCI 293

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  ++  GV+    T   ++  C RS        +HG  I+       ++ SSL+  Y
Sbjct: 294 QLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLY 353

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G+++ + +      +  + SW  M+S  V +G   EA+ +F  + ++  + D     
Sbjct: 354 FKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFT 413

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L +C+ + A ++ K IH  +I+   +    V  A++D YAKCG +  A   F +    
Sbjct: 414 SVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVF-KCLPK 472

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D++ + ++I AY  HG    A+E+F +M  +N++P +  F++++SAC H GLVD+GC  
Sbjct: 473 RDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYY 532

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIH 732
           F  M + YG+ P  + Y CL+D+L R G L +A  +++  P  +    +  +L S CR+H
Sbjct: 533 FNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 733 GNKELGEWASEKLLLLLPKNDAAHVLLS 760
            N +LG   +  L+   P + + ++LLS
Sbjct: 593 RNIDLGAEIARTLIDKDPDDSSTYILLS 620



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 169/665 (25%), Positives = 290/665 (43%), Gaps = 20/665 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS-WT 114
           N KS   G  +H  +V LG  NDIFL   LI  Y  C  +     VFD M     +S W 
Sbjct: 15  NSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWN 74

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
            +++   +N  +   L+++  +    ++ P+ +   SV K C  +     G  IH   +K
Sbjct: 75  GLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIK 134

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  +  VG S++  Y K      A  +F  +   DV CWN +I  Y   G   +AL  
Sbjct: 135 TGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEY 194

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M   G   +  T   A+  C+ + D + G +IH  +I S       I +AL+DMY K
Sbjct: 195 FGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGK 254

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A ++FE+M  K V++WN++  G+    +      LF +    G +P   T S L
Sbjct: 255 CGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSL 314

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           +  C +   L  G  +    +      +  V SSL+ ++ +CG VE+A  +F  +    +
Sbjct: 315 IMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV 374

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN ++SGY       + L  F  + +S VE +  TF  V+  C +    +   +IH  
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNL 434

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           II+    +   +  +L+  Y   G +D +F       + D+ SW +M++A    GH + A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGA 494

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAI-----GAYQRTKSIHPFVIKLGFNTEVYVAS 588
           + +F  ++++  KPD      IL++C        G Y   + I+ +    G    V   S
Sbjct: 495 LELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVY----GIIPRVEHYS 550

Query: 589 AVIDAYAKCGDIKGARMAFDQSFN-SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
            +ID   + G +  A     Q+    +DV + +TL  A   H  +    EI     L + 
Sbjct: 551 CLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEI--ARTLIDK 608

Query: 648 QPSQAT---FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
            P  ++    +S M A +HK        + +S   + G++ +P C    ++      ++E
Sbjct: 609 DPDDSSTYILLSNMYASAHKW---DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVE 665

Query: 705 DAKHV 709
           D  H+
Sbjct: 666 DNSHL 670



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 248/557 (44%), Gaps = 26/557 (4%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L+ D             L   VLG  +H  ++K G   DI + ++L+ MY KC  F   
Sbjct: 101 YLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKA 160

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + +F+EM E+++  W  ++S   Q+G F   L+ +  M+  GF PN   + + +  C  +
Sbjct: 161 IWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARL 220

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  IH   +      + F+  ++++ Y K G +  A  +F  +    V  WN+MI
Sbjct: 221 LDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMI 280

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G     + +   M  EG+     T  + +  CS  A    G+ +HG  IR+ ++
Sbjct: 281 SGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + + ++L+D+Y K   ++ A K+F+ +    V+SWN +  G+       +   LF + 
Sbjct: 341 PDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEM 400

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S    + +TF+ +L  C +L  L+ G ++  L +     + E V  +L+ M+ +CGAV
Sbjct: 401 RKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAV 460

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A SVF  +  +++ +W  +++ Y  +      L+ F  + +S V+ +   F  ++  C
Sbjct: 461 DEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSAC 520

Query: 459 ---------CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SN 507
                    C   NQ +   ++G I +    SC      LI      G+L  ++E    N
Sbjct: 521 GHAGLVDEGCYYFNQMI--NVYGIIPRVEHYSC------LIDLLGRAGRLHEAYEILQQN 572

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE---YILGTILNSCAAIGA 564
              R D+     + SA     +      I  +L++  + PD+   YIL  + N  A+   
Sbjct: 573 PEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID--KDPDDSSTYIL--LSNMYASAHK 628

Query: 565 YQRTKSIHPFVIKLGFN 581
           +   + +   + +LG  
Sbjct: 629 WDEVRVVRSKMKELGLK 645



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 5/145 (3%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S++  D I     L+    L +   G ++H  I++    N+  +   L+ MY+KCG    
Sbjct: 403 SYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-- 155
              VF  + +R+LVSWT +++A   +G     L+++ +M  +   P+  A  +++  C  
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGH 522

Query: 156 ---VSMGASEFGYSIHCFALKIRIE 177
              V  G   F   I+ + +  R+E
Sbjct: 523 AGLVDEGCYYFNQMINVYGIIPRVE 547


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 179/697 (25%), Positives = 339/697 (48%), Gaps = 4/697 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H HI+     ND      LI  YS+ G       VF      +   W +++ + + NG
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            +   + +Y  M +     N +   SV++ C   G    G  +H   +K   + +P V  
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L+ Y +LG + +A +VF  +   D+  W+++I      G   E L+    M+ EG T 
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D    +  ++ C  +    + +  HG I++  +E    + ++LI MY K   +  A  VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E +  +   +W  +   ++      +  +LF     +   PN VT  I+LR C  L  L 
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLR 318

Query: 365 LGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            G  + C+ +      + + +  +L+ ++      ++   +   +  + I  WN L+S Y
Sbjct: 319 EGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + +  F  + + G   +  +    +         Q+  QIHG +IK  F    
Sbjct: 379 AQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMD-E 437

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ +SLI  Y   G +D ++   +  E   + +W +M+S L   G++ +A+++F  +   
Sbjct: 438 YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVT 497

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +  E    +++ +C+ +G  ++ K IH  +I  G    +++ +A++D YAKCGD++ A
Sbjct: 498 CPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTA 557

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  FD + +   V+ +++LI +Y  HG +SE + +F KM  + ++P+  T ++V+SACSH
Sbjct: 558 QRVFD-NMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSH 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V +G L F SM   +G++P  + + C+VD+LSR G L++A  +I++MPF P  +++ 
Sbjct: 617 AGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWG 675

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+GCRIH   ++ +    +L  +   +   + LLS
Sbjct: 676 ALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 272/544 (50%), Gaps = 4/544 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG I+K GF  D  +   L+++Y + GY     +VF EM  R+LVSW+ I+S+ +
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NGE + GL  +  M + G  P+   V +V++ C  +G      S H + LK  IE + F
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  YAK G + +AE VF +++      W AMI  Y   GY  EAL +  SM    
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYA 300
           +  +  T    L+ C+ ++    G+ +H ++I+++++ ++  +   L+++Y  ++  D  
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLC 356

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+   +  + +  WNTL   +++     +T  LF +    G  P+  + +  L   G  
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LGLQ+    +   F+D E V +SLI M+ +CG V++A+ +FD +  K + TWN ++
Sbjct: 417 GELQLGLQIHGHVIKRPFMD-EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG   N      +  F  ++ +  E+    F  V++ C      +    IH  +I  G  
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVR 535

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            C +I ++L+  Y   G L  +   F N +ER  + SW +++S+    G   E + +F  
Sbjct: 536 KCIFIETALVDMYAKCGDLQTAQRVFDNMSER-SVVSWSSLISSYGVHGQISEVIFLFSK 594

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++E+G KP++  +  +L++C+  G  +        +   G   +      ++D  ++ GD
Sbjct: 595 MLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGD 654

Query: 600 IKGA 603
           +  A
Sbjct: 655 LDEA 658



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HGH++K  F ++ ++ N+LI MYSKCGY      +FD+M  + +V+W  ++S   
Sbjct: 421 LGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG     + ++  M        E A  SV++ C  +G  E G  IH   +   + K  F
Sbjct: 480 QNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIF 539

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ YAK GD+  A+RVF ++S   V  W+++I  Y   G   E + + S ML  G
Sbjct: 540 IETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESG 599

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +  T +N L  CS       G      +    +E        ++D+  ++  +D A+
Sbjct: 600 IKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAY 659

Query: 302 KVFERMADKDVIS-WNTLFGG 321
           ++ + M      S W  L  G
Sbjct: 660 EIIKLMPFPPGASIWGALLNG 680



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 19/294 (6%)

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S   + + Q+H  II T   +     + LI+SY   G L +S          D   WG +
Sbjct: 11  STTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           + + V  G   EA++++H ++    + + Y   ++L +C+  G     + +H  +IK GF
Sbjct: 71  LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + +  V +A++  Y + G +  AR  F +     D++ ++++I +   +G ++E ++ F 
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGE-MPLRDLVSWSSIISSVVENGEINEGLDAFR 189

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVD-----KGCLLFKSMDSQYGMQPSPDCYGCLVD 695
            M      P     ++V+ AC   G++       G +L + +++   +  S      L+ 
Sbjct: 190 CMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS------LIF 243

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           M ++ G L  A+ V E          YRS  +   +  +  LG +  E L L +
Sbjct: 244 MYAKCGSLRSAEIVFE-------NVTYRSTSTWTAMISSYNLGGYLKEALALFV 290


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 187/668 (27%), Positives = 331/668 (49%), Gaps = 29/668 (4%)

Query: 136 MKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           M  +G  P +     S++K C+       G  +H   ++  IE +  +  S+++ Y+K G
Sbjct: 52  MARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSG 111

Query: 195 DVAAAERVFYSIS---SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           D+  A+ VF ++      DV  W+AM+  + + G  F+A+ +    L  G+  + Y +  
Sbjct: 112 DLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTA 171

Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK-SSGMDYAFKVFERMAD 309
            ++ CS      +GR I G ++++   E  + +  +LIDM++K  +  + A+KVF++M++
Sbjct: 172 VIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +V++W  +     +   P +    F   +LSG   +  T S +   C +L +L LG QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQL 291

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
              A+  G  D+  V  SL+ M+ +C   G+V+    VFD +   ++ +W  L++GY  N
Sbjct: 292 HSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQN 349

Query: 427 CCDA-DVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           C  A + +  F  +   G VE N  TF    + C    + ++  Q+ G   K G +S   
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSS 409

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + +S+I  +V   +++++          ++ S+   +           A  +   + E  
Sbjct: 410 VSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERE 469

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
                +   ++L+  A +G+ ++ + IH  V+KLG +    V +A+I  Y+KCG I  A 
Sbjct: 470 LGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTAS 529

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F    N N VI + ++I  +A HG     +E F++M    ++P++ T+V+++SACSH 
Sbjct: 530 RVFSLMDNRN-VISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHV 588

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV +G   F SM   + ++P  + Y C+VD+L R G L DA   I  MPFQ    V+R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNL 770
            L  CR+H N ELG+ A+ K+L   P   AA++ LS               R++ +E NL
Sbjct: 649 FLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNL 708

Query: 771 LDHEGVCN 778
           +  EG C+
Sbjct: 709 V-KEGGCS 715



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 198/729 (27%), Positives = 323/729 (44%), Gaps = 73/729 (10%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
            + +D I    S++ S  LKS +      LG  VH  +++     D  L N+LI++YSK 
Sbjct: 51  LMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKS 110

Query: 93  GYFGWGLRVFDEMA---ERNLVSWTLIVSAAIQNG-EFDMGLKMYVDMKTNGFMPNEFAV 148
           G       VF+ M    +R++VSW+ +++    NG EFD  +K++V+    G +PN++  
Sbjct: 111 GDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFD-AIKLFVEFLEMGLVPNDYCY 169

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSI 206
            +V++ C +      G  I  F +K    E +  VGCS+++ + K       A +VF  +
Sbjct: 170 TAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
           S  +V  W  MI      G+  EA+     M+  G   DK+T  +    C+ + +  +GR
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGR 289

Query: 267 QIHGLIIRS----EVECSISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLF 319
           Q+H   IRS    +VECS      L+DMY K S    +D   KVF+RM D  V+SW  L 
Sbjct: 290 QLHSWAIRSGLADDVECS------LVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALI 343

Query: 320 GGFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
            G+ +N N    A +LF + I  G   PNH TFS   + CG + D  +G Q+   A   G
Sbjct: 344 TGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRG 403

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                +V++S+I MF +C  +E A + F+++S KN+ ++N  L G C N       +   
Sbjct: 404 LASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLS 463

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            I E  + V+  TF  ++       + +   QIH  ++K G S    +C++LI  Y   G
Sbjct: 464 EIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCG 523

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            +D +    +  +  ++ SW +M++     G     +  F+ + + G KP+E     IL+
Sbjct: 524 SIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILS 583

Query: 558 SCAAIG-----------AYQRTKSIHP-----------------------FVIKLGFNTE 583
           +C+ +G            Y+  K I P                       F+  + F  +
Sbjct: 584 ACSHVGLVSEGWRHFNSMYEDHK-IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQAD 642

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQ--SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           V V    + A     + +  ++A  +   F+ N+   Y  L   YA  G   E+ E+  K
Sbjct: 643 VLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRK 702

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           MK  NL             CS   + DK    +    S        D    L+  + R G
Sbjct: 703 MKERNLVKE--------GGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCG 754

Query: 702 YLEDAKHVI 710
           Y+ D   V+
Sbjct: 755 YVPDTDLVL 763


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  291 bits (744), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 179/697 (25%), Positives = 339/697 (48%), Gaps = 4/697 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H HI+     ND      LI  YS+ G       VF      +   W +++ + + NG
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            +   + +Y  M +     N +   SV++ C   G    G  +H   +K   + +P V  
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L+ Y +LG + +A +VF  +   D+  W+++I      G   E L+    M+ EG T 
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D    +  ++ C  +    + +  HG I++  +E    + ++LI MY K   +  A  VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E +  +   +W  +   ++      +  +LF     +   PN VT  I+LR C  L  L 
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLR 318

Query: 365 LGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            G  + C+ +      + + +  +L+ ++      ++   +   +  + I  WN L+S Y
Sbjct: 319 EGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVY 378

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + +  F  + + G   +  +    +         Q+  QIHG +IK  F    
Sbjct: 379 AQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMD-E 437

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ +SLI  Y   G +D ++   +  E   + +W +M+S L   G++ +A+++F  +   
Sbjct: 438 YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVT 497

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +  E    +++ +C+ +G  ++ K IH  +I  G    +++ +A++D YAKCGD++ A
Sbjct: 498 CPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTA 557

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  FD + +   V+ +++LI +Y  HG +SE + +F KM  + ++P+  T ++V+SACSH
Sbjct: 558 QRVFD-NMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSH 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V +G L F SM   +G++P  + + C+VD+LSR G L++A  +I++MPF P  +++ 
Sbjct: 617 AGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWG 675

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+GCRIH   ++ +    +L  +   +   + LLS
Sbjct: 676 ALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLS 712



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 149/544 (27%), Positives = 272/544 (50%), Gaps = 4/544 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG I+K GF  D  +   L+++Y + GY     +VF EM  R+LVSW+ I+S+ +
Sbjct: 117 VGQRVHGRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NGE + GL  +  M + G  P+   V +V++ C  +G      S H + LK  IE + F
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  YAK G + +AE VF +++      W AMI  Y   GY  EAL +  SM    
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYA 300
           +  +  T    L+ C+ ++    G+ +H ++I+++++ ++  +   L+++Y  ++  D  
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLC 356

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+   +  + +  WNTL   +++     +T  LF +    G  P+  + +  L   G  
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LGLQ+    +   F+D E V +SLI M+ +CG V++A+ +FD +  K + TWN ++
Sbjct: 417 GELQLGLQIHGHVIKRPFMD-EYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMI 475

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG   N      +  F  ++ +  E+    F  V++ C      +    IH  +I  G  
Sbjct: 476 SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVR 535

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            C +I ++L+  Y   G L  +   F N +ER  + SW +++S+    G   E + +F  
Sbjct: 536 KCIFIETALVDMYAKCGDLQTAQRVFDNMSER-SVVSWSSLISSYGVHGQISEVIFLFSK 594

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++E+G KP++  +  +L++C+  G  +        +   G   +      ++D  ++ GD
Sbjct: 595 MLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGD 654

Query: 600 IKGA 603
           +  A
Sbjct: 655 LDEA 658



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 2/261 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HGH++K  F ++ ++ N+LI MYSKCGY      +FD+M  + +V+W  ++S   
Sbjct: 421 LGLQIHGHVIKRPFMDE-YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLS 479

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG     + ++  M        E A  SV++ C  +G  E G  IH   +   + K  F
Sbjct: 480 QNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIF 539

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ YAK GD+  A+RVF ++S   V  W+++I  Y   G   E + + S ML  G
Sbjct: 540 IETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSKMLESG 599

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +  T +N L  CS       G      +    +E        ++D+  ++  +D A+
Sbjct: 600 IKPNDVTVMNVLSACSHAGCVKEGMLFFNSMRDFGIEPKREHFVCIVDLLSRAGDLDEAY 659

Query: 302 KVFERMADKDVIS-WNTLFGG 321
           ++ + M      S W  L  G
Sbjct: 660 EIIKLMPFPPGASIWGALLNG 680



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 19/294 (6%)

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S   + + Q+H  II T   +     + LI+SY   G L +S          D   WG +
Sbjct: 11  STTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVL 70

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           + + V  G   EA++++H ++    + + Y   ++L +C+  G     + +H  +IK GF
Sbjct: 71  LKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGF 130

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + +  V +A++  Y + G +  AR  F +     D++ ++++I +   +G ++E ++ F 
Sbjct: 131 DMDPVVNTALLSVYGELGYLDSARKVFGE-MPLRDLVSWSSIISSVVENGEINEGLDAFR 189

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVD-----KGCLLFKSMDSQYGMQPSPDCYGCLVD 695
            M      P     ++V+ AC   G++       G +L + +++   +  S      L+ 
Sbjct: 190 CMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSS------LIF 243

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           M ++ G L  A+ V E          YRS  +   +  +  LG +  E L L +
Sbjct: 244 MYAKCGSLRSAEIVFE-------NVTYRSTSTWTAMISSYNLGGYLKEALALFV 290


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 298/583 (51%), Gaps = 1/583 (0%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +N  +   ++  Y +     +A  VF  + + +   W ++I  +A      +AL + SSM
Sbjct: 74  RNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSM 133

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           L  G   D++   + ++ C+ + D  +GRQ+H   ++SE    + + NAL+ MY KS  +
Sbjct: 134 LRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLV 193

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQ 356
              F +F RM +KD ISW ++  GF++     +   +F + +  G   PN   F  +   
Sbjct: 194 ADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSA 253

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           CG L  L+ G Q+  L++            SL  M+ RC  +E A  VF  +   ++ +W
Sbjct: 254 CGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSW 313

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++        ++ +     +  SG+  +G T   ++  C   +  Q    +H  ++K
Sbjct: 314 NSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVK 373

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G      +C+SL+  Y       ++ +  +     D+ +W ++++A V   H      +
Sbjct: 374 LGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKL 433

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F+ L  +    D   L  +L++ A +G ++  K +H    K+G   +  +++ +ID YAK
Sbjct: 434 FNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAK 493

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG +  A   F+    ++DV  +++LI+ YA  G   +A+++F +M+   ++P+  TFV 
Sbjct: 494 CGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVG 553

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V++ACS  GLVD+GC  +  M+ ++G+ P+ +   C++D+L+R G L +A   ++ MPF+
Sbjct: 554 VLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFE 613

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           P   ++++LL+G + H + E+G  A+E +L + P + AA+VLL
Sbjct: 614 PDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLL 656



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 160/639 (25%), Positives = 285/639 (44%), Gaps = 10/639 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTN---DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
            L++  LG  VH H++     N   +  L N+LI MY +C        VFDEM  +N VS
Sbjct: 50  RLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVS 109

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  +++A  QN      L ++  M  +G  P++FA+GS ++ C  +G    G  +H  A+
Sbjct: 110 WASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAM 169

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           K     +  V  +++  Y+K G VA    +F  +   D   W ++I G+A  G   EAL 
Sbjct: 170 KSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQ 229

Query: 233 VVSSMLFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           +   M+ EG+   +++ F +    C ++   + G QIH L ++  ++ +     +L DMY
Sbjct: 230 IFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMY 289

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +   ++ A +VF  +   D++SWN++    S      +   L  +   SG RP+ +T  
Sbjct: 290 ARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVR 349

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            LL  C     +  G  +    +  G   + +V +SL+ M+ RC     A  VF     +
Sbjct: 350 GLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDR 409

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ TWN +L+    +     V K F  +  S   ++  +   V+         +MV Q+H
Sbjct: 410 DVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVH 469

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHN 530
               K G  +   + + LI +Y   G LD++ + F       D+ SW +++      G+ 
Sbjct: 470 TCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYP 529

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASA 589
            +A+ +F  +   G +P+      +L +C+ +G        +  +  + G        S 
Sbjct: 530 RKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSC 589

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           VID  A+ G +  A    DQ     D++++ TL+     H  V       +   + N+ P
Sbjct: 590 VIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAE--GILNIDP 647

Query: 650 SQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           S  A +V + +  S  G  ++   L K+M S  G++ SP
Sbjct: 648 SHSAAYVLLCNIYSASGDWNEFARLKKAMRSS-GVKKSP 685


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/575 (28%), Positives = 305/575 (53%), Gaps = 7/575 (1%)

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L  +A  G +  A ++F  ++  D   WN MI G+  CG  FEAL +   M+F G+  D 
Sbjct: 67  LRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADS 126

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           +T+   ++  + ++  + G++IH ++I+      + + N+LI +Y+K      A KVFE 
Sbjct: 127 FTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEE 186

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M ++D++SWN++  G+   ++  ++  LF + +  G +P+  +    L  C  +   ++G
Sbjct: 187 MPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMG 246

Query: 367 LQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
            +L C A+       +  V +S++ M+ + G V  A  +F  +  +NI  WN L+  Y  
Sbjct: 247 KELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYAR 306

Query: 426 NCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           N    D    F  + E +G++ +  T   ++  C   E +     IHG  ++ GF     
Sbjct: 307 NSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRT----IHGYAMRRGFLPHIV 362

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++LI  Y  +GQL ++    +     ++ SW ++++A V  G N+ A+ +F  L ++ 
Sbjct: 363 LDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSS 422

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             PD   + +IL + A   +    + IH +++K  + +   + ++++  YA CGD++ AR
Sbjct: 423 LLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDAR 482

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F+      DV+ +N++IMAYA HG    ++ +F +M  + + P+++TF S+++ACS  
Sbjct: 483 KCFNHVL-LKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSIS 541

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           G+VD+G   F+SM  +YG+ P  + YG ++D++ R G    AK  I  MPF P+  ++ S
Sbjct: 542 GMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGS 601

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           LL+  R H +  + E+A+E++  +   N   +VLL
Sbjct: 602 LLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLL 636



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/559 (24%), Positives = 265/559 (47%), Gaps = 25/559 (4%)

Query: 89  YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
           ++  G     L++FDEM + +   W +++      G +   L++Y  M  +G   + F  
Sbjct: 70  FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             V+K    + + E G  IH   +K+R   + +V  S+++ Y KLG    AE+VF  +  
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            D+  WN+MI GY     GF +L +   ML  G   D+++ ++AL  CS V   ++G+++
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249

Query: 269 HGLIIRSEVEC-SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           H   +RS +E   + ++ +++DMY K   + YA ++F+ +  +++++WN L G ++ N  
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSR 309

Query: 328 PGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
                  F K    +G +P+ +T   LL  C  L     G  +   A+  GFL    + +
Sbjct: 310 VTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRGFLPHIVLDT 365

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI M+   G ++ A  +FD ++ KN+ +WN +++ Y  N  +   L+ F  +W+S +  
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   ++     S +     QIH  I+K+ + S   I +SL+  Y   G L+++ +  
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--- 563
           N     D+ SW +++ A    G    +V +F  ++ +   P++    ++L +C+  G   
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545

Query: 564 -------AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
                  + +R   I P +   G+         ++D   + G+   A+    +       
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGY---------MLDLIGRTGNFSSAKRFIREMPFLPTA 596

Query: 617 IVYNTLIMAYAHHGLVSEA 635
            ++ +L+ A  +H  ++ A
Sbjct: 597 RIWGSLLNASRNHNDITVA 615



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 246/501 (49%), Gaps = 27/501 (5%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+ KS++   +L+    G ++H  ++KL F +D+++ N+LI++Y K G      +VF+EM
Sbjct: 131 FVIKSVTGISSLEE---GKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEM 187

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            ER++VSW  ++S  +   +    L ++ +M   GF P+ F+  S +  C  + +   G 
Sbjct: 188 PERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGK 247

Query: 166 SIHCFALKIRIEK-NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            +HC A++ RIE  +  V  S+L+ Y+K G+V+ AER+F  I   ++  WN +IG YA  
Sbjct: 248 ELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARN 307

Query: 225 GYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
               +A      M  + G+  D  T IN L  C+++     GR IHG  +R      I +
Sbjct: 308 SRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMRRGFLPHIVL 363

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             ALIDMY +   +  A  +F+R+A+K++ISWN++   + +N        LF K   S  
Sbjct: 364 DTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSL 423

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+  T + +L    + L L  G Q+    +   +     + +SL++M+  CG +E A  
Sbjct: 424 LPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARK 483

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS-- 461
            F++V  K++ +WN ++  Y  +      +  F  +  S V+ N  TF  ++  C  S  
Sbjct: 484 CFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGM 543

Query: 462 -----ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                E  + + + +G  I  G    GY+   + ++    G   ++  F      L  A 
Sbjct: 544 VDEGWEYFESMKREYG--IDPGIEHYGYMLDLIGRT----GNFSSAKRFIREMPFLPTAR 597

Query: 517 -WGAMMSALVHQGHNHEAVTI 536
            WG++++A      NH  +T+
Sbjct: 598 IWGSLLNA----SRNHNDITV 614



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 45/213 (21%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A+SLSLSE       G Q+H +IVK  + ++  + N+L+ MY+ CG      + F+ +  
Sbjct: 438 AESLSLSE-------GRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLL 490

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC------------ 155
           +++VSW  I+ A   +G   + + ++ +M  +   PN+    S++  C            
Sbjct: 491 KDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEY 550

Query: 156 ---------VSMGASEFGYSIHCF-------ALKIRIEKNPFVGC-----SVLNFYAKLG 194
                    +  G   +GY +          + K  I + PF+       S+LN      
Sbjct: 551 FESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHN 610

Query: 195 DVA----AAERVFYSISSDDVGCWNAMIGGYAH 223
           D+     AAE++F  +  D+ GC+  ++  YA 
Sbjct: 611 DITVAEFAAEQIF-KMEHDNTGCYVLLLNMYAE 642


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 203/742 (27%), Positives = 344/742 (46%), Gaps = 99/742 (13%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           + G  G    VFD M  R++++W  ++SA   NG  D    +Y D  + G M      G+
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNM----RTGA 100

Query: 151 VMKVCVSMGASEFGYSIHCFALKIR------IEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           ++           GY      L+ R      +E+N     ++++ Y + GD+  A R+F 
Sbjct: 101 ILLS---------GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151

Query: 205 SISSDDVGCWNAMIGGYAHC--------------------------GYGF-----EALNV 233
           ++ S DV  WN+M+ GY H                           GYG      +A ++
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  EG+  D+  F +AL     + + D+   +  L +++  E  + I  A++++Y +
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 294 -SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
            +S +D A K FE M +++  +W+T+    S         +++ +  +  S         
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK-SIACRTALIT 330

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS--SLIYMFCRCGAVEMAHSVFDNVSY 410
            L QCG++ D  +  +          + E  V S  +LI  + + G V  A  +FD + +
Sbjct: 331 GLAQCGRIDDARILFEQ---------IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPF 381

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +N  +W  +++GY  N    + L     +  SG+  +  +   +   C      +   Q+
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQV 441

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLD-----------------NSF---------- 503
           H   +K G     + C++LI  Y     ++                 NSF          
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501

Query: 504 -----EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
                 F N   R D+ SW  ++SA  H   ++EA+  F ++    E P+  IL  +L  
Sbjct: 502 DEARNTFDNMLSRDDV-SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGV 560

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           C ++GA +  + IH   IKLG ++E+ VA+A+I  Y KCG    +R  FD      D+  
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDL-MEERDIFT 618

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +NT+I  YA HGL  EA++++  M+ A + P++ TFV +++ACSH GLVD+G   FKSM 
Sbjct: 619 WNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMS 678

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             YG+ P P+ Y C+VD+L R G ++ A+  I  MP +P   ++ +LL  C+IH N E+G
Sbjct: 679 QDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIG 738

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
           + A+EKL  + P N   +V+LS
Sbjct: 739 KRAAEKLFRIEPSNAGNYVMLS 760



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 165/375 (44%), Gaps = 35/375 (9%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI  Y + G       +FD+M  RN +SW  +++   QNG  +  L +  ++  +G +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+  ++ S+   C ++ A E G  +H  A+K+  + N F   +++  Y K  ++  A +V
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476

Query: 203 FYSISSDDVGCWNA-------------------------------MIGGYAHCGYGFEAL 231
           F  + + D+  WN+                               +I  YAH     EA+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
               +M  E    +       L  C  +    IG+QIH + I+  ++  + + NALI MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K    D + ++F+ M ++D+ +WNT+  G++++    +   ++     +G  PN VTF 
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS-VFDNVS 409
            LL  C     +D G +  + ++   G        + ++ +  R G V+ A   ++D   
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715

Query: 410 YKNITTWNELLSGYC 424
             +   W+ LL G C
Sbjct: 716 EPDTVIWSALL-GAC 729



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 48/312 (15%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N+ +   GTQVH   VK+G   + F  N LI MY KC    +  +VF  M  +++VSW  
Sbjct: 431 NIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNS 490

Query: 116 IVSAAIQNGEFDMGLKMYVDM-------------------KTNGFM------------PN 144
            ++A +QN   D     + +M                   ++N  M            PN
Sbjct: 491 FLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPN 550

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
              +  ++ VC S+GAS+ G  IH  A+K+ ++    V  ++++ Y K G  A + R+F 
Sbjct: 551 SPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFD 609

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +   D+  WN +I GYA  G G EA+ +   M   G+  ++ TF+  L  CS     D 
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669

Query: 265 G-------RQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFK-VFERMADKDVISW 315
           G        Q +GL    E   C       ++D+  ++  +  A + +++   + D + W
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYAC-------MVDLLGRTGDVQGAEQFIYDMPIEPDTVIW 722

Query: 316 NTLFGGFSENKN 327
           + L G    +KN
Sbjct: 723 SALLGACKIHKN 734



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           FC    L   PI L   L +  +L +  +G Q+H   +KLG  +++ + N LI+MY KCG
Sbjct: 543 FCEHE-LPNSPI-LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                 R+FD M ER++ +W  I++   Q+G     +KMY  M++ G +PNE     ++ 
Sbjct: 601 CAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLN 659

Query: 154 VCVSMGASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DV 211
            C   G  + G+      +    +   P     +++   + GDV  AE+  Y +  + D 
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719

Query: 212 GCWNAMIGG 220
             W+A++G 
Sbjct: 720 VIWSALLGA 728



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           CS+ I+     G++  + E  +   R D+ +W +M+SA  H G    A  ++ + +  G 
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA-ISGGN 95

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
                IL   L+    +G     + +  F   L  NT  +  +A+I  Y + GDI  AR 
Sbjct: 96  MRTGAIL---LSGYGRLGRVLEARRV--FDGMLERNTVAW--NAMISCYVQNGDITMARR 148

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
            FD +  S DV  +N+++  Y H   + +A  +F+KM   NL
Sbjct: 149 LFD-AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL 189


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 190/638 (29%), Positives = 312/638 (48%), Gaps = 5/638 (0%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +GE    L +   ++++   P+E A  ++  +C    A+E G      A          +
Sbjct: 75  HGELQQALWL---LESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRL 131

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++L+   + G+   A +VF  +   DV  WN M+GGY   G+  EAL++   ML+ G 
Sbjct: 132 GNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D YTF   L+ C  V D  +GR++H  ++R  +   + ++NAL+ MY K   ++ A K
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARK 251

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ M+  D ISWN +  G  EN        LF   +     PN +T + +    G L D
Sbjct: 252 VFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           LD   ++  LA+  GF  +    +SLI M+   G +  A +VF  +  ++  +W  ++SG
Sbjct: 312 LDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISG 371

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N      L+ +  +  + V  +  T    +  C       +  ++H      GF   
Sbjct: 372 YEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRY 431

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L++ Y     ++ + E        D+ SW +M++       N EA+  F  ++ 
Sbjct: 432 IVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML- 490

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           A  KP+       L +CAA G+ +  K IH  V++ G  +E YV +A++D Y KCG    
Sbjct: 491 ADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGY 550

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F  +  + DV+ +N ++  +  HG    A+  F++M      P + TFV+++  CS
Sbjct: 551 AWAQFG-AHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
             G+V +G  LF SM  +Y + P+   Y C+VD+LSR G L +  + I  MP  P   V+
Sbjct: 610 RAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVW 669

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL+GCRIH N ELGE A++ +L L P +   HVLLS
Sbjct: 670 GALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLS 707



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/608 (25%), Positives = 283/608 (46%), Gaps = 4/608 (0%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           L E  ++   G +  GH      T  + L N +++M  + G      +VF +M ER++ S
Sbjct: 103 LCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFS 162

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W ++V    + G  +  L +Y  M   G  P+ +    V++ C  +     G  +H   L
Sbjct: 163 WNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVL 222

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +  +     V  +++  YAK GDV AA +VF  +S  D   WNAMI G+         L 
Sbjct: 223 RFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLE 282

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   ML + +  +  T  +      L++D D  ++IH L ++      ++  N+LI MY 
Sbjct: 283 LFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYS 342

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
               M  A  VF RM  +D +SW  +  G+ +N  P +   ++    ++   P+ VT + 
Sbjct: 343 SLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVAS 402

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            L  C  L  LD+G++L  LA   GF+    V ++L+ M+ +   +E A  VF  +  K+
Sbjct: 403 ALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKD 462

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W+ +++G+CFN  + + L  F ++  + V+ N  TF   +  C  + + +   +IH 
Sbjct: 463 VISWSSMIAGFCFNHKNFEALYYFRHML-ADVKPNSVTFIAALAACAATGSLRCGKEIHA 521

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +++ G +S GY+ ++L+  YV  GQ   ++         D+ SW  M++  V  GH   
Sbjct: 522 HVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDI 581

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           A++ F+ ++E GE PDE     +L  C+  G   Q  +  H    K      +   + ++
Sbjct: 582 ALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMV 641

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D  ++ G +       ++   + D  V+  L+     H  + E  E+  K+ L  L+P+ 
Sbjct: 642 DLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNI-ELGELAAKIVL-ELEPND 699

Query: 652 ATFVSVMS 659
           A +  ++S
Sbjct: 700 AGYHVLLS 707


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 163/569 (28%), Positives = 299/569 (52%), Gaps = 14/569 (2%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN ++   A  G    ++ +   M+  G+ MD YTF    +  S +     G Q+HG I+
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           +S      S+ N+L+  Y+K+  +D A KVF+ M ++DVISWN++  G+  N    +  S
Sbjct: 72  KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +F + ++SG   +  T   +   C     + LG  +  + +   F  E+   ++L+ M+ 
Sbjct: 132 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 191

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG ++ A +VF  +S +++ ++  +++GY       + +K F  + E G+  +  T   
Sbjct: 192 KCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTA 251

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           V+  C R        ++H  I +       ++ ++L+  Y   G +  +    +     D
Sbjct: 252 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 311

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIH 572
           + SW  ++       + +EA+++F+ L+E     PDE  +  +L +CA++ A+ + + IH
Sbjct: 312 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 371

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            ++++ G+ ++ +VA++++D YAKCG +  A M FD    S D++ +  +I  Y  HG  
Sbjct: 372 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD-IASKDLVSWTVMIAGYGMHGFG 430

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
            EA+ +F++M+ A ++  + +FVS++ ACSH GLVD+G   F  M  +  ++P+ + Y C
Sbjct: 431 KEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 490

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +VDML+R G L  A   IE MP  P  T++ +LL GCRIH + +L E  +EK+  L P+N
Sbjct: 491 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 550

Query: 753 DAAHVLLS------------KRKRQREGN 769
              +VL++            KR R+R G 
Sbjct: 551 TGYYVLMANIYAEAEKWEQVKRLRKRIGQ 579



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/417 (31%), Positives = 221/417 (52%), Gaps = 6/417 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           ++KS S   +L+S   G Q+HG I+K GF     + N+L+A Y K        +VFDEM 
Sbjct: 50  VSKSFS---SLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT 106

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ER+++SW  I++  + NG  + GL ++V M  +G   +   + SV   C        G +
Sbjct: 107 ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRA 166

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   +K    +      ++L+ Y+K GD+ +A+ VF  +S   V  + +MI GYA  G 
Sbjct: 167 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGL 226

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA+ +   M  EGI+ D YT    L  C+     D G+++H  I  +++   I + NA
Sbjct: 227 AGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNA 286

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-- 344
           L+DMY K   M  A  VF  M  KD+ISWNT+ GG+S+N    +  SLF+  +L   R  
Sbjct: 287 LMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFS 345

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+  T + +L  C  L   D G ++    +  G+  + +V +SL+ M+ +CGA+ +AH +
Sbjct: 346 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 405

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           FD+++ K++ +W  +++GY  +    + +  F  + ++G+E +  +F  ++  C  S
Sbjct: 406 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 462



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 144/592 (24%), Positives = 269/592 (45%), Gaps = 8/592 (1%)

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FDE+     + W ++++   ++G+F   + ++  M ++G   + +    V K   S+ + 
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  +H F LK    +   VG S++ FY K   V +A +VF  ++  DV  WN++I GY
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G   + L+V   ML  GI +D  T ++   GC+      +GR +H + +++      
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
              N L+DMY K   +D A  VF  M+D+ V+S+ ++  G++     G+   LF +    
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+  T + +L  C +   LD G ++           +  V+++L+ M+ +CG+++ A
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCR 460
             VF  +  K+I +WN ++ GY  NC   + L  F  + E      +  T   V+  C  
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   +IHG I++ G+ S  ++ +SL+  Y   G L  +    +     D+ SW  M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ---RTKSIHPFVIK 577
           ++     G   EA+ +F+ + +AG + DE    ++L +C+  G      R  +I     K
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           +    E Y  + ++D  A+ GD+  A    +      D  ++  L+     H  V  A +
Sbjct: 481 IEPTVEHY--ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 538

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           + +  K+  L+P    +  +M+    +    +     +    Q G++ +P C
Sbjct: 539 VAE--KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 588



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 83/160 (51%), Gaps = 2/160 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG+I++ G+ +D  + N+L+ MY+KCG       +FD++A ++LVSWT++++    
Sbjct: 367 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 426

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS-IHCFALKIRIEKNPF 181
           +G     + ++  M+  G   +E +  S++  C   G  + G+   +    + +IE    
Sbjct: 427 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 486

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
               +++  A+ GD+  A R   ++    D   W A++ G
Sbjct: 487 HYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 203/742 (27%), Positives = 344/742 (46%), Gaps = 99/742 (13%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           + G  G    VFD M  R++++W  ++SA   NG  D    +Y D  + G M      G+
Sbjct: 46  RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNM----RTGA 100

Query: 151 VMKVCVSMGASEFGYSIHCFALKIR------IEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           ++           GY      L+ R      +E+N     ++++ Y + GD+  A R+F 
Sbjct: 101 ILLS---------GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151

Query: 205 SISSDDVGCWNAMIGGYAHC--------------------------GYGF-----EALNV 233
           ++ S DV  WN+M+ GY H                           GYG      +A ++
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  EG+  D+  F +AL     + + D+   +  L +++  E  + I  A++++Y +
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 294 -SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
            +S +D A K FE M +++  +W+T+    S         +++ +  +  S         
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVK-SIACRTALIT 330

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS--SLIYMFCRCGAVEMAHSVFDNVSY 410
            L QCG++ D  +  +          + E  V S  +LI  + + G V  A  +FD + +
Sbjct: 331 GLAQCGRIDDARILFEQ---------IPEPIVVSWNALITGYMQNGMVNEAKELFDKMPF 381

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           +N  +W  +++GY  N    + L     +  SG+  +  +   +   C      +   Q+
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQV 441

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLD-----------------NSF---------- 503
           H   +K G     + C++LI  Y     ++                 NSF          
Sbjct: 442 HSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLL 501

Query: 504 -----EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
                 F N   R D+ SW  ++SA  H   ++EA+  F ++    E P+  IL  +L  
Sbjct: 502 DEARNTFDNMLSRDDV-SWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGV 560

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           C ++GA +  + IH   IKLG ++E+ VA+A+I  Y KCG    +R  FD      D+  
Sbjct: 561 CGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFDL-MEERDIFT 618

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +NT+I  YA HGL  EA++++  M+ A + P++ TFV +++ACSH GLVD+G   FKSM 
Sbjct: 619 WNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMS 678

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             YG+ P P+ Y C+VD+L R G ++ A+  I  MP +P   ++ +LL  C+IH N E+G
Sbjct: 679 QDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIG 738

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
           + A+EKL  + P N   +V+LS
Sbjct: 739 KRAAEKLFRIEPSNAGNYVMLS 760



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 165/375 (44%), Gaps = 35/375 (9%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI  Y + G       +FD+M  RN +SW  +++   QNG  +  L +  ++  +G +
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+  ++ S+   C ++ A E G  +H  A+K+  + N F   +++  Y K  ++  A +V
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476

Query: 203 FYSISSDDVGCWNA-------------------------------MIGGYAHCGYGFEAL 231
           F  + + D+  WN+                               +I  YAH     EA+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
               +M  E    +       L  C  +    IG+QIH + I+  ++  + + NALI MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K    D + ++F+ M ++D+ +WNT+  G++++    +   ++     +G  PN VTF 
Sbjct: 597 FKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFV 655

Query: 352 ILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS-VFDNVS 409
            LL  C     +D G +  + ++   G        + ++ +  R G V+ A   ++D   
Sbjct: 656 GLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPI 715

Query: 410 YKNITTWNELLSGYC 424
             +   W+ LL G C
Sbjct: 716 EPDTVIWSALL-GAC 729



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 48/312 (15%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N+ +   GTQVH   VK+G   + F  N LI MY KC    +  +VF  M  +++VSW  
Sbjct: 431 NIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNS 490

Query: 116 IVSAAIQNGEFDMGLKMYVDM-------------------KTNGFM------------PN 144
            ++A +QN   D     + +M                   ++N  M            PN
Sbjct: 491 FLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPN 550

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
              +  ++ VC S+GAS+ G  IH  A+K+ ++    V  ++++ Y K G  A + R+F 
Sbjct: 551 SPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADSRRIFD 609

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +   D+  WN +I GYA  G G EA+ +   M   G+  ++ TF+  L  CS     D 
Sbjct: 610 LMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDE 669

Query: 265 G-------RQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFK-VFERMADKDVISW 315
           G        Q +GL    E   C       ++D+  ++  +  A + +++   + D + W
Sbjct: 670 GWKFFKSMSQDYGLTPLPEHYAC-------MVDLLGRTGDVQGAEQFIYDMPIEPDTVIW 722

Query: 316 NTLFGGFSENKN 327
           + L G    +KN
Sbjct: 723 SALLGACKIHKN 734



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           FC    L   PI L   L +  +L +  +G Q+H   +KLG  +++ + N LI+MY KCG
Sbjct: 543 FCEHE-LPNSPI-LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                 R+FD M ER++ +W  I++   Q+G     +KMY  M++ G +PNE     ++ 
Sbjct: 601 CAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLN 659

Query: 154 VCVSMGASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DV 211
            C   G  + G+      +    +   P     +++   + GDV  AE+  Y +  + D 
Sbjct: 660 ACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDT 719

Query: 212 GCWNAMIGG 220
             W+A++G 
Sbjct: 720 VIWSALLGA 728



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           CS+ I+     G++  + E  +   R D+ +W +M+SA  H G    A  ++ + +  G 
Sbjct: 37  CSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA-ISGGN 95

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
                IL   L+    +G     + +  F   L  NT  +  +A+I  Y + GDI  AR 
Sbjct: 96  MRTGAIL---LSGYGRLGRVLEARRV--FDGMLERNTVAW--NAMISCYVQNGDITMARR 148

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
            FD +  S DV  +N+++  Y H   + +A  +F+KM   NL
Sbjct: 149 LFD-AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNL 189


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/617 (28%), Positives = 316/617 (51%), Gaps = 7/617 (1%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAAERVFYSI 206
           S+++ C S  +      IH   + + +  +P+   +  S+   YA  G    A ++F  +
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIG 265
            +  +  WNAMI  Y + G  ++AL +   ML  G    D YT+   ++ C      ++G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
             IH   + S  +    + N+L+ MY+    M+ A +VF+ M ++ ++SWNT+  G+ +N
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               +   +F   I  G  P+  T   +L  C  L +L++G ++  L       ++ +V 
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGV 444
           +SL+ M+ +CG ++ A  +F  +  +++ +W  +++GY  N  DA      C + +   V
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNG-DARSALLLCQMMQFESV 321

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + N  T   V+  C    + +    +HG  I+    S   + ++LI  Y     ++ SF 
Sbjct: 322 KPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFR 381

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +   +   A W A++S  +H G + +A+ +F  ++     P++  L ++L + A +  
Sbjct: 382 VFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTD 441

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLI 623
            Q+ +++H ++I+ GF + + VA+ +ID Y+KCG ++ A   F+       D+I ++ +I
Sbjct: 442 LQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAII 501

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y  HG    A+ +FD+M  + ++P++ TF S++ ACSH GLVD+G  LFK M     M
Sbjct: 502 AGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQM 561

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
               D Y C++D+L R G LE+A  +I  M F+P+  V+ +LL  C IH N ELGE A++
Sbjct: 562 SLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAK 621

Query: 744 KLLLLLPKNDAAHVLLS 760
            L  L P N   +VLL+
Sbjct: 622 WLFELEPGNTGNYVLLA 638



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 257/548 (46%), Gaps = 11/548 (2%)

Query: 65  QVHGHIVKLGFTNDIF---LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           Q+H H + LG  +  +   L ++L A Y+ CG      ++FDE+   +L SW  ++    
Sbjct: 39  QIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYT 98

Query: 122 QNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            +G     L ++V M  +G   P+ +    V+K C      E G  IH   +    + + 
Sbjct: 99  NSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDA 158

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S++  Y   G++  A RVF  +    +  WN MI GY   G   EAL V   M+ +
Sbjct: 159 FVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGK 218

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D  T ++ L  CS + + ++GR++H L+    +   IS+ N+L+DMY K   MD A
Sbjct: 219 GIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEA 278

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M  +DV+SW T+  G+  N +      L         +PN VT + +L  C  L
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASL 338

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G  L   A+      E  V ++LI M+ +C  V ++  VF   S +    WN ++
Sbjct: 339 YSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAII 398

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG   N      ++ F  +    V+ N  T   ++       + Q    +HG +I++GF 
Sbjct: 399 SGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFL 458

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAER--LDMASWGAMMSALVHQGHNHEAVTIFH 538
           S   + + LI  Y   G L+++    NG  +   D+ +W A+++     GH   A+++F 
Sbjct: 459 SRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFD 518

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYA 595
            +V++G KP+E    +IL++C+  G       +  F++   ++   T+ Y  + VID   
Sbjct: 519 QMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHY--TCVIDLLG 576

Query: 596 KCGDIKGA 603
           + G ++ A
Sbjct: 577 RAGRLEEA 584



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 143/507 (28%), Positives = 236/507 (46%), Gaps = 41/507 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +H   V  GF +D F+QN+L+AMY  CG      RVFD M ER LVSW  +++   
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG     L ++  M   G  P+   V SV+ VC  +   E G  +H       + ++  
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L+ YAK G++  A+ +FY +   DV  W  M+ GY   G    AL +   M FE 
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T  + L  C+ +     GR +HG  IR ++E  + +  ALIDMY K + ++ +F
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF + + +    WN +  G   N    +   LF + ++    PN  T + LL     L 
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNEL 419
           DL     +    +  GFL    V + LI ++ +CG++E AH++F+ +    K+I TW+ +
Sbjct: 441 DLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS--------------ENQQ 465
           ++GY  +      +  F  + +SGV+ N  TF  ++  C  +              E+ Q
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSAL 524
           M        ++T   +C      +I      G+L+ ++E     A R + A WGA++ + 
Sbjct: 561 MS-------LRTDHYTC------VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSC 607

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYI 551
           V            H  VE GE   +++
Sbjct: 608 V-----------IHENVELGEVAAKWL 623



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 17/378 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK   +G +VH  +       DI + N+L+ MY+KCG       +F EM +R++VSWT +
Sbjct: 237 LKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTM 296

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  I NG+    L +   M+     PN   + SV+  C S+ + + G  +H +A++ ++
Sbjct: 297 MNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKL 356

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E    V  ++++ YAK  +V  + RVF   S      WNA+I G  H G   +A+ +   
Sbjct: 357 ESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQ 416

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML E +  +  T  + L   + + D    R +HG +IRS     I +   LID+Y K   
Sbjct: 417 MLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGS 476

Query: 297 MDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           ++ A  +F  +   DKD+I+W+ +  G+  + +     SLF + + SG +PN +TF+ +L
Sbjct: 477 LESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSIL 536

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTS-------SLIYMFCRCGAVEMAHSVFDN 407
             C     +D GL L        F+ E+N  S        +I +  R G +E A+ +   
Sbjct: 537 HACSHAGLVDEGLGL------FKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRT 590

Query: 408 VSYK-NITTWNELLSGYC 424
           ++++ N   W  LL G C
Sbjct: 591 MAFRPNHAVWGALL-GSC 607



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 9/343 (2%)

Query: 28  LCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
           LC   QF S   ++ + + LA  LS   +L S   G  +HG  ++    +++ ++  LI 
Sbjct: 312 LCQMMQFES---VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALID 368

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+KC       RVF + +++    W  I+S  I NG     ++++  M      PN+  
Sbjct: 369 MYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDAT 428

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           + S++     +   +   ++H + ++        V   +++ Y+K G + +A  +F  I 
Sbjct: 429 LNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIP 488

Query: 208 S--DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
               D+  W+A+I GY   G+G  A+++   M+  G+  ++ TF + L  CS     D G
Sbjct: 489 KKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEG 548

Query: 266 RQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG-- 321
             +   ++  +++         +ID+  ++  ++ A+++   MA + +   W  L G   
Sbjct: 549 LGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCV 608

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             EN   G+ A+ +   +  G+  N+V  + +    G+  D +
Sbjct: 609 IHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAE 651


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/638 (28%), Positives = 320/638 (50%), Gaps = 5/638 (0%)

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+ +  +K+   M+      +E    +++++C    A E G  ++  AL         +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF-EG 241
           G + L  + + G++  A  VF  +S  ++  WN ++GGYA  GY  EA+ +   ML+  G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D YTF   L+ C  + D   G+++H  ++R   E  I +VNALI MY+K   +  A 
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+RM  +D+ISWN +  G+ EN    +   LF         P+ +T + ++  C  L 
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D  LG  +    +  GF  + +V +SL  M+   G+   A  +F  +  K+I +W  ++S
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY +N      + T+  + +  V+ +  T   V+  C    +     ++H   IK    S
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y     +D + +  +   R ++ SW ++++ L       EA+ IF   +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +   +P+   L   L +CA IGA    K IH  V++ G   + ++ +A++D Y +CG + 
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A   F+      DV  +N L+  Y+  G  S  +E+FD+M  + ++P + TF+S++  C
Sbjct: 551 TAWSQFNS--QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S   +V +G + F  M+  YG+ P+   Y C+VD+L R G L++A   I+ MP  P P V
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + +LL+ CRIH   +LGE +++ +  L  K+   ++LL
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 146/593 (24%), Positives = 278/593 (46%), Gaps = 9/593 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + +F+A  + L E  +++  G++V+   +    +  + L N  +AM+ + G       VF
Sbjct: 94  EDVFVA-LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
            +M+ERNL SW ++V    + G FD  + +Y  M    G  P+ +    V++ C  +   
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  +H   ++   E +  V  +++  Y K GDV +A  +F  +   D+  WNAMI GY
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G   E L +  +M    +  D  T  + +  C L+ D  +GR IH  +I +     I
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           S+ N+L  MY+ +     A K+F RM  KD++SW T+  G+  N  P +    +      
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             +P+ +T + +L  C  L DLD G++L  LA+    +    V ++LI M+ +C  ++ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452

Query: 402 HSVFDNVSYKNITTWNELLSGYCFN--CCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
             +F N+  KN+ +W  +++G   N  C +A +   F    +  ++ N  T    +  C 
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI---FLRQMKMTLQPNAITLTAALAACA 509

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R        +IH  +++TG     ++ ++L+  YV  G+++ ++   N +++ D+ SW  
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNI 568

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++    +G     V +F  +V++  +PDE    ++L  C+     ++       +   G
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYG 628

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHHGL 631
               +   + V+D   + G+++ A     +   + D  V+  L+ A   HH +
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKI 681



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 52/302 (17%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H H+++ G   D FL N L+ MY +CG        F+   ++++ SW ++++   +
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSE 575

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VSMGASEFG----YSI------ 167
            G+  M ++++  M  +   P+E    S++  C     V  G   F     Y +      
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKH 635

Query: 168 -----------------HCFALKIRIEKNPFVGCSVLN-----FYAKLGDVAAAERVFYS 205
                            H F  K+ +  +P V  ++LN         LG+++A     + 
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH--IFE 693

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +    VG +  +   YA CG   E   V   M   G+T+D         GCS V   ++ 
Sbjct: 694 LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD--------AGCSWV---EVK 742

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSE 324
            ++H  +   +       +N +++ + +        K+ E  + D+  IS + +F G SE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802

Query: 325 NK 326
            K
Sbjct: 803 RK 804


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 281/564 (49%), Gaps = 4/564 (0%)

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           R+F  +   D   WN MI GY  CG    +  + + M   G  +D Y+F   L+G +   
Sbjct: 2   RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
            FD+G Q+HGL+++   EC++ + ++L+DMY K   ++ AF  F  + + + +SWN L  
Sbjct: 62  RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121

Query: 321 GFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
           GF + ++      L     +  +   +  TF+ LL      +  +L  Q+    L  G  
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCN 438
            E  + +++I  +  CG V  A  VFD +   K++ +WN +++G   +       + F  
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF-- 496
           +  + +E +  T+  +V  C   E+Q     +HG +IK G      + ++LI  Y+ F  
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPT 301

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G + ++       +  D+ SW ++M+     G + +AV  F  L  +  + D+Y    +L
Sbjct: 302 GVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVL 361

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            SC+ +   Q  +  H    K  F +  +V S++I  Y+KCG I+ AR  F+Q  + ++ 
Sbjct: 362 RSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNT 421

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +N +I+ YA HG    ++++F +M   N++    TF ++++ACSH GL+ +G  L  S
Sbjct: 422 IAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNS 481

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M+  Y +QP  + Y   VD+L R G +   K +IE MP  P P V ++ L  CR  G  E
Sbjct: 482 MEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGEIE 541

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           +    +  LL + P++  A+V LS
Sbjct: 542 MATQVANHLLEIEPEDHFAYVSLS 565



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 194/412 (47%), Gaps = 19/412 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG +VK G+  ++++ ++L+ MY+KC         F E+ E N VSW  +++  +
Sbjct: 65  LGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAGFV 124

Query: 122 QNGEFD--------MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           Q  +          M +K  V M    F P    +   M  C  +        +H   LK
Sbjct: 125 QVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPM-FCNLLK------QVHAKVLK 177

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGYAHCGYGFEALN 232
           + +E    +  ++++ YA  G V+ A+RVF  +  S D+  WN+MI G +       A  
Sbjct: 178 LGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFE 237

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + + M    I  D YT+   +  CS       G+ +HGL+I+  +E   S+ NALI MYI
Sbjct: 238 LFTEMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYI 297

Query: 293 K--SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           +  +  M  A  +FE +  KD++SWN++  GFS+N         F     S    +   F
Sbjct: 298 QFPTGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAF 357

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S +LR C  L  L LG Q   LA    F   E VTSSLI M+ +CG +E A   F+ +S 
Sbjct: 358 SAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISS 417

Query: 411 K-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           K N   WN ++ GY  +      L  F  +    V+++  TF  ++  C  +
Sbjct: 418 KHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHT 469



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 245/534 (45%), Gaps = 12/534 (2%)

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +R+FDEM +R+ VSW  ++S     G+ +    ++ DMK  G   + ++   ++K   S 
Sbjct: 1   MRLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASA 60

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              + G  +H   +K   E N +VG S+++ YAK   V  A   F  I   +   WNA+I
Sbjct: 61  KRFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALI 120

Query: 219 GGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
            G+        A  ++  M  +  +TMD  TF   L         ++ +Q+H  +++  +
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFH 336
           E  I+I NA+I  Y     +  A +VF+ +   KD+ISWN++  G S+++       LF 
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR-- 394
           +   +    +  T++ ++  C        G  L  L +  G     +V+++LI M+ +  
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A S+F+++  K++ +WN +++G+  N    D +K F  +  S +EV+   F  V
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLD 513
           + +C      Q+  Q H    K+ F S  ++ SSLI  Y   G ++N+ + F   + + +
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHN 420

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR----TK 569
             +W AM+      G    ++ +F  +     K D      IL +C+  G  Q       
Sbjct: 421 TIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLN 480

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           S+ P V K+    E Y  +A +D   + G +   +   +    + D +V  T +
Sbjct: 481 SMEP-VYKIQPRMEHY--AAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFL 531



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 60/136 (44%), Gaps = 1/136 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           ++   S +  D    +  L    +L +  LG Q H    K  F ++ F+ ++LI MYSKC
Sbjct: 343 RYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKC 402

Query: 93  GYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           G      + F++++ + N ++W  ++    Q+G   + L ++  M       +     ++
Sbjct: 403 GVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAI 462

Query: 152 MKVCVSMGASEFGYSI 167
           +  C   G  + G  +
Sbjct: 463 LTACSHTGLIQEGLEL 478


>gi|147846491|emb|CAN79511.1| hypothetical protein VITISV_014157 [Vitis vinifera]
          Length = 1007

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 190/658 (28%), Positives = 328/658 (49%), Gaps = 9/658 (1%)

Query: 109 NLVSWTLIVSAAIQNGEFDM--GLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGY 165
            L +W L +  +     +D       Y  MK  G  + +   V S++K C S+     G 
Sbjct: 11  KLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRH-GK 69

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           SIH   LK   +     G S  +FY K G + +A  VF S+ S D   WN MI G+   G
Sbjct: 70  SIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRG 129

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
                L             +  T + A+  C  +   + G ++HG IIRS      S+ N
Sbjct: 130 ASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQN 189

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-R 344
           +L+ MY  +  M+ A ++F+ M ++DVISW+ + GG+ +         LF +   +    
Sbjct: 190 SLLSMYADND-MERAEELFDEMCERDVISWSVMIGGYVQTGEAXMALQLFLEMXSNAXIE 248

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + +T   +L+ C    D+ +G  +  + +  G   +  V +S+I M+ +    E A   
Sbjct: 249 LDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKXDDHESAFKA 308

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  +N  +WN ++SG       ++ L  F ++ ++G   +  T   ++++C    + 
Sbjct: 309 FNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDP 368

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                IH  +I+ G+    ++ +SLI +Y     ++ +++  +  +  D  SW AM++  
Sbjct: 369 FQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGF 428

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
            H G   EA+ +F  + +A EKP+   + ++L + +     +R+K  H   I+ G   EV
Sbjct: 429 NHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIXIRRGLAAEV 488

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V +A++D YAKCG+I  +R AFDQ    N ++ +  +I A   +GL  +A+ +  +MKL
Sbjct: 489 AVGTAILDMYAKCGEIGLSRKAFDQIPEKN-IVSWGAMIAACGMNGLARDALALLSEMKL 547

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             L+P+  T +SV+SACSH GLV++G   F++M   +G++P  + Y C+VDML R G L 
Sbjct: 548 HGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLXRAGKLN 607

Query: 705 DAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            A ++IE MP   +    ++ +LLS CR  GN  LG  A+ ++L L P++ A + L S
Sbjct: 608 XAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAXRVLXLEPQSSAGYFLAS 665



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 149/570 (26%), Positives = 265/570 (46%), Gaps = 18/570 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP  +   L    +L  R  G  +H  ++K GF +     N+    Y K G     L VF
Sbjct: 49  DPTLVHSILKACSSLPVR-HGKSIHASLLKQGFDSLTSTGNSXXDFYMKTGALDSALFVF 107

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M  R+ VSW +++   +  G  D GL  +   +   F PN   +   +  C S+GA E
Sbjct: 108 DSMRSRDSVSWNIMIHGHLSRGASDXGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAME 167

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H + ++      P V  S+L+ YA   D+  AE +F  +   DV  W+ MIGGY 
Sbjct: 168 EGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYV 226

Query: 223 HCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             G    AL +   M     I +D  T ++ L+ C+   D  +GR +HG++I   ++  +
Sbjct: 227 QTGEAXMALQLFLEMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDL 286

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + N++IDMY K    + AFK F  M  ++ +SWN++  G    +   +  SLF+    +
Sbjct: 287 FVGNSIIDMYSKXDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKA 346

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCG 396
           G R + VT   LL+ C   +D       QC  +H      G+   E V +SLI  + +C 
Sbjct: 347 GFRADEVTLVNLLQSCKYFVD-----PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCD 401

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA--DVLKTFCNIWESGVEVNGCTFFYV 454
            +E+A  +FD +  K+  +W+ +++G  FN C    + +  F  + ++  + NG T   +
Sbjct: 402 LIELAWKLFDRLKTKDTVSWSAMIAG--FNHCGKPDEAIALFQEMNQAQEKPNGVTILSL 459

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +E    S + +     HG  I+ G ++   + ++++  Y   G++  S +  +     ++
Sbjct: 460 LEAFSVSADLKRSKWAHGIXIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNI 519

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SWGAM++A    G   +A+ +   +   G KP+     ++L++C+  G  +   S    
Sbjct: 520 VSWGAMIAACGMNGLARDALALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFEN 579

Query: 575 VIK-LGFNTEVYVASAVIDAYAKCGDIKGA 603
           +++  G    +   S ++D   + G +  A
Sbjct: 580 MVQDHGVEPGLEHYSCMVDMLXRAGKLNXA 609



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 179/395 (45%), Gaps = 6/395 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +  S++ +  D I +   L    N     +G  VHG ++  G   D+F+ N++I MYSK 
Sbjct: 240 EMXSNAXIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKX 299

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                  + F+EM  RN VSW  I+S  ++  +    L ++  M   GF  +E  + +++
Sbjct: 300 DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL 359

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C           IH   ++   E N FV  S+++ Y+K   +  A ++F  + + D  
Sbjct: 360 QSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTV 419

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W+AMI G+ HCG   EA+ +   M       +  T ++ L+  S+ AD    +  HG+ 
Sbjct: 420 SWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIX 479

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           IR  +   +++  A++DMY K   +  + K F+++ +K+++SW  +      N       
Sbjct: 480 IRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDAL 539

Query: 333 SLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           +L  +  L G +PN VT   +L  C  G L++  L      +  H G        S ++ 
Sbjct: 540 ALLSEMKLHGLKPNXVTTLSVLSACSHGGLVEEGLSFFENMVQDH-GVEPGLEHYSCMVD 598

Query: 391 MFCRCGAVEMAHSVFDNVSYK---NITTWNELLSG 422
           M  R G +  A ++ + +  +       W  LLS 
Sbjct: 599 MLXRAGKLNXAMNLIEKMPERMRDGAGLWGALLSA 633


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 266/514 (51%), Gaps = 2/514 (0%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF + L+ C+  AD   GR +H  +    +        AL +MY K      A +VF+RM
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLG 366
             +D ++WN L  G++ N        +  +     G RP+ VT   +L  C     L   
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            ++   A+  GF ++ NV+++++ ++C+CGAV+ A  VFD +  +N  +WN ++ GY  N
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + L  F  +   GV+V   +    +  C          ++H  +++ G  S   + 
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++LI  Y    + D + +  +        SW AM+      G + +AV +F  +     K
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           PD + L +I+ + A I    + + IH + I+L  + +VYV +A+ID YAKCG +  AR  
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSL 586

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F+ S     VI +N +I  Y  HG    A+E+F++MK +   P++ TF+SV+SACSH GL
Sbjct: 587 FN-SARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGL 645

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           VD+G   F SM   YG++P  + YG +VD+L R G L +A   I+ MP +P  +VY ++L
Sbjct: 646 VDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             C++H N EL E +++++  L P+    HVLL+
Sbjct: 706 GACKLHKNVELAEESAQRIFELEPEEGVYHVLLA 739



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 231/504 (45%), Gaps = 46/504 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +   G + +      L  MY+KC   G   RVFD M  R+ V+W  +V+   +
Sbjct: 244 GRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYAR 303

Query: 123 NGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG  +  + M V M+  +G  P+   + SV+  C    A      +H FA++   ++   
Sbjct: 304 NGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVN 363

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y K G V +A +VF  +   +   WNAMI GYA  G   EAL +   M+ EG
Sbjct: 364 VSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEG 423

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +   + + AL  C  +   D GR++H L++R  +E +++++NALI MY K    D A 
Sbjct: 424 VDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAA 483

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+ +  K  +SWN +  G ++N +      LF +  L   +P+  T   ++     L 
Sbjct: 484 QVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSII---PALA 540

Query: 362 DLDLGLQLQ-----CLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           D+   LQ +      + LH   LD++  V ++LI M+ +CG V +A S+F++   +++ T
Sbjct: 541 DISDPLQARWIHGYSIRLH---LDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVIT 597

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ GY  +      ++ F  +  SG   N  TF  V+  C            H  ++
Sbjct: 598 WNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACS-----------HAGLV 646

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G            + Y  F  +   +    G     M  +G M+  L   G  HEA +
Sbjct: 647 DEG------------QEY--FSSMKEDYGLEPG-----MEHYGTMVDLLGRAGKLHEAWS 687

Query: 536 IFHSLVEAGEKPDEYILGTILNSC 559
               +     +P   + G +L +C
Sbjct: 688 FIQKM---PMEPGISVYGAMLGAC 708



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/574 (22%), Positives = 245/574 (42%), Gaps = 5/574 (0%)

Query: 117 VSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           + AA    +    L  +  M   +G  P      S++K+C +      G ++H       
Sbjct: 196 LRAAASRSDLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG 255

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +        ++ N YAK      A RVF  + + D   WNA++ GYA  G    A+ +V 
Sbjct: 256 LSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVV 315

Query: 236 SMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
            M  E G   D  T ++ L  C+        R++H   +R   +  +++  A++D+Y K 
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A KVF+ M D++ +SWN +  G++EN +  +  +LF + +  G     V+    L
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAAL 435

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             CG+L  LD G ++  L +  G     NV ++LI M+C+C   ++A  VFD + YK   
Sbjct: 436 HACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRV 495

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN ++ G   N    D ++ F  +    V+ +  T   ++       +      IHG  
Sbjct: 496 SWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYS 555

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           I+       Y+ ++LI  Y   G++  +    N A    + +W AM+      G    AV
Sbjct: 556 IRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAV 615

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDA 593
            +F  +  +G+ P+E    ++L++C+  G     +     + +  G    +     ++D 
Sbjct: 616 ELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDL 675

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
             + G +  A     +      + VY  ++ A   H  V  A E     ++  L+P +  
Sbjct: 676 LGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEE--SAQRIFELEPEEGV 733

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +  +++       + K     ++   + G+Q +P
Sbjct: 734 YHVLLANIYANASLWKDVARVRTAMEKKGLQKTP 767



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 146/317 (46%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + L   L    + ++     +VH   V+ GF   + +   ++ +Y KCG      +
Sbjct: 324 RPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARK 383

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD M +RN VSW  ++    +NG+    L ++  M   G    + +V + +  C  +G 
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  +H   ++I +E N  V  +++  Y K      A +VF  +       WNAMI G
Sbjct: 444 LDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILG 503

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
               G   +A+ + S M  E +  D +T ++ +   + ++D    R IHG  IR  ++  
Sbjct: 504 CTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQD 563

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + ++ ALIDMY K   +  A  +F    D+ VI+WN +  G+  + +      LF +   
Sbjct: 564 VYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKS 623

Query: 341 SGSRPNHVTFSILLRQC 357
           SG  PN  TF  +L  C
Sbjct: 624 SGKVPNETTFLSVLSAC 640



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 62/112 (55%), Gaps = 4/112 (3%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           +S+ L++R     +HG+ ++L    D+++   LI MY+KCG       +F+   +R++++
Sbjct: 542 ISDPLQAR----WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVIT 597

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           W  ++     +G   + ++++ +MK++G +PNE    SV+  C   G  + G
Sbjct: 598 WNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 318/611 (52%), Gaps = 4/611 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V+K C    + + G  IH    K+  + + FVG ++L FY   G +   +RVF  +   D
Sbjct: 13  VLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERD 72

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           V  WN++IG ++  G+  EA+++   M L  G   +  + ++ L  C+ + D   GRQIH
Sbjct: 73  VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             ++++ ++  +++ NAL+D+Y K   +  + +VF+ +++++ +SWN +    +  +   
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQ 192

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               +F   I  G +PN VTFS +L    +L   D G ++   +L  G   +  V ++LI
Sbjct: 193 DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALI 252

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ + G    A +VF+ +  KNI +WN +++ +  N  +   +     +   G   N  
Sbjct: 253 DMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSV 312

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  V+  C R    +   +IH   I+TG S   ++ ++L   Y   G L+ +      +
Sbjct: 313 TFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKIS 372

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
            R D  S+  ++       +  E++ +F  +   G K D      ++++CA + A ++ K
Sbjct: 373 LR-DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGK 431

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +H   ++   +T +++A+A++D Y KCG I  A   F Q   S D   +N++I+ Y   
Sbjct: 432 EVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQ-IPSRDTASWNSMILGYGML 490

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G ++ A+ +F+ MK   ++    ++++V+SACSH GLV++G   F+ M  Q  ++P+   
Sbjct: 491 GELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMH 549

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L R G +E+A  +IE +P +P   V+ +LL  CRIHG  EL  WA+E L  L 
Sbjct: 550 YACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLK 609

Query: 750 PKNDAAHVLLS 760
           P++   + +LS
Sbjct: 610 PQHSGYYSVLS 620



 Score =  251 bits (642), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 169/635 (26%), Positives = 307/635 (48%), Gaps = 6/635 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG + KLGF +D+F+ N L+  Y  CG      RVFDEM ER++VSW  ++     
Sbjct: 26  GREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLERDVVSWNSVIGVFSV 85

Query: 123 NGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G +   + ++ +M   +GF PN  ++ SV+ VC  +     G  IHC+ +K  ++    
Sbjct: 86  HGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVT 145

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ Y K G V  + RVF  IS  +   WNA+I   A+     +AL +   M+  G
Sbjct: 146 VGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGG 205

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF + L     +  FD G++IHG  +R  +E  I + NALIDMY KS     A 
Sbjct: 206 VKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQAS 265

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF ++ +K+++SWN +   F++N+       L  +    G  PN VTF+ +L  C ++ 
Sbjct: 266 NVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIG 325

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++   A+  G   +  V+++L  M+ +CG + +A  VF  +S ++  ++N L+ 
Sbjct: 326 FLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILII 384

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY      ++ L+ F  +   G++++  ++  V+  C      +   ++HG  ++    +
Sbjct: 385 GYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHT 444

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +I ++L+  Y+  G++D + +        D ASW +M+      G    A+ +F ++ 
Sbjct: 445 HLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMK 504

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E G + D      +L++C+  G  +  K     +            + ++D   + G I+
Sbjct: 505 EDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIE 564

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A    +      D  V+  L+ A   HG +  A   +    L  L+P  + + SV+S  
Sbjct: 565 EAVKLIESLPIEPDANVWGALLGACRIHGYIELAH--WAAEHLFKLKPQHSGYYSVLSNM 622

Query: 662 -SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
            +  G  D+   + K M S+ G + +P C    +D
Sbjct: 623 YAEAGKWDEANQVRKLMKSR-GAKKNPGCSWVQID 656



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 261/574 (45%), Gaps = 39/574 (6%)

Query: 25  IHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN 84
           IH  C  N     S  R + + +   L +   L+  V G Q+H ++VK G  + + + N 
Sbjct: 93  IHLFCEMNL---RSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNA 149

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           L+ +Y KCGY     RVFDE++ERN VSW  I+++          L+M+  M   G  PN
Sbjct: 150 LVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPN 209

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
                S++ V V +   +FG  IH F+L+  +E + FV  ++++ YAK G    A  VF 
Sbjct: 210 SVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFN 269

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            I   ++  WNAM+  +A       A+++V  M  +G   +  TF N L  C+ +     
Sbjct: 270 QIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRP 329

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G++IH   IR+     + + NAL DMY K   ++ A +VF +++ +D +S+N L  G+S+
Sbjct: 330 GKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQ 388

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
             N  ++  LF +  + G + + V++  ++  C  L  L  G ++  LA+         +
Sbjct: 389 TTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFI 448

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+  + +CG +++A  VF  +  ++  +WN ++ GY         +  F  + E GV
Sbjct: 449 ANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGV 508

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           E +  ++  V+  C            HG +++ G            K Y    Q+ N   
Sbjct: 509 EYDSVSYIAVLSACS-----------HGGLVEEG------------KKYFEHMQVQNI-- 543

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                 +     +  M+  L   G   EAV +  SL     +PD  + G +L +C   G 
Sbjct: 544 ------KPTQMHYACMVDLLGRAGLIEEAVKLIESL---PIEPDANVWGALLGACRIHGY 594

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +        + KL      Y  S + + YA+ G
Sbjct: 595 IELAHWAAEHLFKLKPQHSGYY-SVLSNMYAEAG 627



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 221/432 (51%), Gaps = 5/432 (1%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +D +TF   L+ C+       GR+IHG++ +   +  + + N L+  Y    G+   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGK 359
            +VF+ M ++DV+SWN++ G FS +    +   LF +  L SG RPN V+   +L  C  
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L D   G Q+ C  +  G   +  V ++L+ ++ +CG V+ +  VFD +S +N  +WN +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++   +   + D L+ F  + + GV+ N  TF  ++      +      +IHG  ++ G 
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 480 SSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            S  ++ ++LI  Y   G+ L  S  F+   E+ ++ SW AM++          AV +  
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   GE P+      +L +CA IG  +  K IH   I+ G + +++V++A+ D YAKCG
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCG 360

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  AR  F  S    D + YN LI+ Y+     SE++ +F +M +  ++    +++ V+
Sbjct: 361 CLNLARRVFKISL--RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVI 418

Query: 659 SACSHKGLVDKG 670
           SAC++   + +G
Sbjct: 419 SACANLAALKQG 430



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 178/372 (47%), Gaps = 3/372 (0%)

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G R +  TF  +L+ C   L +  G ++  +    GF  +  V ++L+  +  CG ++  
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETCCR 460
             VFD +  +++ +WN ++  +  +   A+ +  FC +   SG   N  +   V+  C  
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
            E+     QIH  ++KTG  S   + ++L+  Y   G + +S    +     +  SW A+
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +++L +   N +A+ +F  +++ G KP+     ++L     +  +   K IH F ++ G 
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            ++++VA+A+ID YAK G    A   F+Q     +++ +N ++  +A + L   A+++  
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQ-IGEKNIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M+     P+  TF +V+ AC+  G +  G  +  +   + G          L DM ++ 
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEI-HARAIRTGSSVDLFVSNALTDMYAKC 359

Query: 701 GYLEDAKHVIEI 712
           G L  A+ V +I
Sbjct: 360 GCLNLARRVFKI 371


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 190/704 (26%), Positives = 344/704 (48%), Gaps = 18/704 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H  I+  G +N++F    L+A Y+      +   +F  +  +++  W  I+ +   NG
Sbjct: 58  QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 117

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVG 183
           ++      Y+ M+ +  +PN+F V  V+  C  +     G +IH    K+ +   N  +G
Sbjct: 118 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 177

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S +  Y+K G V +A  +F  I+  DV  W A+I GY         L  +  M   G T
Sbjct: 178 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 237

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            +  T  +  Q C  +     G+ +HGL +++   C   + + ++ MY +    + A++ 
Sbjct: 238 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 297

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F ++  KD+ISW ++    S+     +   LF +   S   P+ +  S +L   G    +
Sbjct: 298 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 357

Query: 364 DLG------LQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             G      +  QC AL         +T ++L+ M+C+ G +  A+ +F +  +K+   W
Sbjct: 358 FEGKAFHARILKQCCAL-------SGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDW 409

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + ++ GY         +     +   G E +  +   V+ +C +     +   IH   IK
Sbjct: 410 STMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIK 469

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
                   + +SL+  Y   G +  ++   +   + D+ SW  ++S+    G   EA+ +
Sbjct: 470 NSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIIL 529

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +V+    P++     +L++CA + +    + IH ++ + GF + + + +A+ID YAK
Sbjct: 530 FDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAK 589

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG+++ +R  F+ S    DVI++N +I  Y  HG V  AMEIF  M+ +N++P+  TF+S
Sbjct: 590 CGELETSRKLFN-STEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLS 648

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++SAC+H G V +G  LF  M  +YG++PS   Y  ++D+L R+G LE A+ ++  MP  
Sbjct: 649 LLSACNHTGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPIT 707

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P  TV+ SLLS C+IH   E+G   +   +   PKND  +++LS
Sbjct: 708 PDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILS 751



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 250/564 (44%), Gaps = 2/564 (0%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  +HG   KLG F  +  + ++ I MYSKCG+      +F E+  +++V+WT ++   +
Sbjct: 157 GMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYV 216

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN E   GLK   +M   G  PN   +GS  + CV + A   G  +H  ALK        
Sbjct: 217 QNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV 276

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y++ G    A R F  +   D+  W ++I  ++  G   E L++   M    
Sbjct: 277 VKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASE 336

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D+      L G         G+  H  I++     S    NAL+ MY K   +  A 
Sbjct: 337 IIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTAN 396

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F     K    W+T+  G+S      +  S   + +L G  P+  +   ++  C ++ 
Sbjct: 397 KIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVG 455

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +++G  + C A+    ++  +V +SL+ M+ + G V     +F     +++ +WN L+S
Sbjct: 456 AINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLIS 515

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +   A+ +  F  + +  V  N  T   V+  C    +     +IH  I + GF S
Sbjct: 516 SYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFES 575

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I ++LI  Y   G+L+ S +  N  E  D+  W  M+S     GH   A+ IF  + 
Sbjct: 576 NITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLME 635

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E+  KP+     ++L++C   G     + +   + K G    +   +++ID   + G ++
Sbjct: 636 ESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLE 695

Query: 602 GARMAFDQSFNSNDVIVYNTLIMA 625
            A         + D  V+ +L+ A
Sbjct: 696 AAEALVLSMPITPDGTVWGSLLSA 719



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 257/543 (47%), Gaps = 39/543 (7%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L + V G  +HG  +K GF     +++ +++MYS+CG      R F ++ +++L+SWT 
Sbjct: 252 DLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTS 311

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF---AL 172
           I++   + G     L ++ +M+ +  +P+E  +      C+ MG   FG S   F   A 
Sbjct: 312 IIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS-----CMLMG---FGNSDRIFEGKAF 363

Query: 173 KIRIEK-----NPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCG 225
             RI K     +     ++L+ Y K G +  A ++F+S   SS+D   W+ MI GY++ G
Sbjct: 364 HARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED---WSTMILGYSNMG 420

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              + ++ +  ML  G   D  + ++ +  CS V   +IGR IH   I++ +  ++S+ N
Sbjct: 421 QKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVAN 480

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L+DMY KS  +   +++F R   +DVISWNTL   + ++    +   LF K +     P
Sbjct: 481 SLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYP 540

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N VT  I+L  C  L  LD G ++       GF     + ++LI M+ +CG +E +  +F
Sbjct: 541 NKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLF 600

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           ++   +++  WN ++S Y  +      ++ F  + ES ++ N  TF  ++  C  + +  
Sbjct: 601 NSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVL 660

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL--------DMASW 517
               +   + K G        +S+I      G L+        AE L        D   W
Sbjct: 661 EGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLE-------AAEALVLSMPITPDGTVW 713

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPD-EYILGTILNSCAAIGAYQRTKSIHPFVI 576
           G+++SA          V +    +E+  K D  YI+ + L SC  +G +   + +   + 
Sbjct: 714 GSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSC--LGRWDEVEKVRDMMK 771

Query: 577 KLG 579
           K G
Sbjct: 772 KRG 774



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 1/171 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   +L S   G ++H +I + GF ++I ++  LI MY+KCG      ++F+   ER++
Sbjct: 549 LSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDV 608

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           + W +++S    +G  +  ++++  M+ +   PN     S++  C   G    G  +   
Sbjct: 609 ILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDR 668

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
             K  IE +     S+++   + G + AAE +  S+  + D   W +++  
Sbjct: 669 MQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSA 719


>gi|302820510|ref|XP_002991922.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
 gi|300140308|gb|EFJ07033.1| hypothetical protein SELMODRAFT_134446 [Selaginella moellendorffii]
          Length = 690

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 183/654 (27%), Positives = 319/654 (48%), Gaps = 43/654 (6%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            ++++ C    +   G  IH   L        F+G  ++  Y K G +A A+  F  I  
Sbjct: 40  ATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHR 99

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  W  M+G +A CG+  +A+ +  +M+ EG+  D   F +    CS +  F  G+ I
Sbjct: 100 KNVFSWTIMLGAFADCGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAI 159

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H  ++    E  + + N L+ MY K   +D A  VF R+ +K+ ISWN +   F++  + 
Sbjct: 160 HDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDF 219

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                L+ +  +    P+ +T  +  + C  L DLD G ++   A+  G   +  V +SL
Sbjct: 220 ASALELYVEHPV----PDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSL 275

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKN--ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           I M+ +C  V  A  +FD +  KN  + +WN +++ Y      +  L+ F    +  VE 
Sbjct: 276 IGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRERMD--VEP 333

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS--------------SCGYI------- 485
           N  TF  +++ C    + +    IH  I  + F+               CG I       
Sbjct: 334 NRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEEAMAIF 393

Query: 486 ---------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH-EAVT 535
                     +SL+  Y  FG + ++    +G    D+ +W AM++A   Q H   EAV 
Sbjct: 394 ESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQEHTSMEAVD 453

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F  +   G KPDE    ++L S A +G   R +S+H  V+  GF ++V V +A++D Y+
Sbjct: 454 YFCQMDLDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVGTALLDMYS 513

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG +  A+ AFD    S +++ +N +I A A HG  S   E++  M L  ++P+  TF 
Sbjct: 514 KCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFT 573

Query: 656 SVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           +++  CSH G  D+ C ++ +  S   ++G++ +PD +  +VD+L R+G LE+A+  ++ 
Sbjct: 574 NMLFLCSHGGGGDRECGIWDACASIVLEFGVKITPDHHCSIVDVLGRSGRLEEAEEFVDK 633

Query: 713 -MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQ 765
            M F+P    YR+LL  C +  + E G   +++++ + P+   A+ LL+K  R+
Sbjct: 634 GMGFEPGIVEYRTLLGSCTVACDMERGARVAQRVMEIEPQTSMAYSLLAKILRR 687



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 154/609 (25%), Positives = 262/609 (43%), Gaps = 47/609 (7%)

Query: 55  ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           E  KS   G  +H HI+  G +   FL N L+ MY KCG        FD++  +N+ SWT
Sbjct: 47  ERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWT 106

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           +++ A    G     +++Y  M   G  P+  A  S+  +C  +   + G +IH   L+ 
Sbjct: 107 IMLGAFADCGHHRQAIQIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQ 166

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +  V  +++  Y+K G +  A  VF  I + +   WNAMI  +A CG    AL   
Sbjct: 167 GAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNKNPISWNAMIAAFAQCGDFASALE-- 224

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             +  E    DK T I A + C+ + D D GR+IH   +   +E  + + N+LI MY K 
Sbjct: 225 --LYVEHPVPDKITLILAAKACASLGDLDRGREIHARAVELGLESDLLVANSLIGMYGKC 282

Query: 295 SGMDYAFKVFERM--ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
             +  A ++F+ +   ++DVISWN++   +       Q   LF + +     PN +TF  
Sbjct: 283 YCVGDAKRLFDGLEAKNRDVISWNSIIAAYILAGMSSQALELFRERM--DVEPNRITFIA 340

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L+  C  L DL+ G  +        F  E  V + L+ M+ +CG++E A ++F+++  + 
Sbjct: 341 LIDACSTLCDLEQGRWIHERIRSSEFAREVAVENGLLLMYAKCGSIEEAMAIFESMEGRR 400

Query: 413 ITTWNELLSGYCFNCCDADVLKT--------------------------------FCNIW 440
            T    L+  YC   C AD +                                  FC + 
Sbjct: 401 -TLATSLVIMYCKFGCVADAMAVFSGMRSRDVVAWTAMITAFSQQEHTSMEAVDYFCQMD 459

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL- 499
             G + +  TF  V+ +  R         +H  ++  GF S   + ++L+  Y   G L 
Sbjct: 460 LDGSKPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVGTALLDMYSKCGSLI 519

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D    F +     ++ SW AM++A+   G       ++ +++  G +P++     +L  C
Sbjct: 520 DAKRAFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFTNMLFLC 579

Query: 560 AAIGAYQRTKSI----HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           +  G   R   I       V++ G         +++D   + G ++ A    D+      
Sbjct: 580 SHGGGGDRECGIWDACASIVLEFGVKITPDHHCSIVDVLGRSGRLEEAEEFVDKGMGFEP 639

Query: 616 VIV-YNTLI 623
            IV Y TL+
Sbjct: 640 GIVEYRTLL 648



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 201/417 (48%), Gaps = 40/417 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +  A    +   L+    G  +H  +++ G  +D+ + NNL+ MYSKCG      
Sbjct: 133 VRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGAR 192

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF  +  +N +SW  +++A  Q G+F   L++YV+      +P++  +    K C S+G
Sbjct: 193 CVFRRIKNKNPISWNAMIAAFAQCGDFASALELYVEHP----VPDKITLILAAKACASLG 248

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAM 217
             + G  IH  A+++ +E +  V  S++  Y K   V  A+R+F  + +   DV  WN++
Sbjct: 249 DLDRGREIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSI 308

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  Y   G   +AL +    +   +  ++ TFI  +  CS + D + GR IH  I  SE 
Sbjct: 309 IAAYILAGMSSQALELFRERM--DVEPNRITFIALIDACSTLCDLEQGRWIHERIRSSEF 366

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERM--------------------AD-------- 309
              +++ N L+ MY K   ++ A  +FE M                    AD        
Sbjct: 367 AREVAVENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGM 426

Query: 310 --KDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
             +DV++W  +   FS+ ++    A   F +  L GS+P+ VTF+ +L    +L  L  G
Sbjct: 427 RSRDVVAWTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRG 486

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSG 422
             + C  L CGF  +  V ++L+ M+ +CG++  A   FD++   +N+ +WN +++ 
Sbjct: 487 RSVHCDVLACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAA 543



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 123/545 (22%), Positives = 238/545 (43%), Gaps = 51/545 (9%)

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           +V++ +  + + +D   +   L+ C        GR IH  I+ S       + N L+ MY
Sbjct: 22  SVLARLGHKDLDVDNDVYATLLRECERSKSLSQGRYIHAHILASGKSGKTFLGNLLVRMY 81

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A + F+++  K+V SW  + G F++  +  Q   ++H  +L G RP+ V F+
Sbjct: 82  GKCGSIADAKEAFDQIHRKNVFSWTIMLGAFADCGHHRQAIQIYHAMVLEGVRPDCVAFA 141

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +   C +L     G  +    L  G   +  V ++L+ M+ +CG ++ A  VF  +  K
Sbjct: 142 SIAGICSELQCFQAGKAIHDCVLEQGAESDVIVANNLVTMYSKCGRIDGARCVFRRIKNK 201

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVE---VNGCTFFYVVETCCRSENQQMVG 468
           N  +WN +++ +   C D      F +  E  VE    +  T     + C    +     
Sbjct: 202 NPISWNAMIAAFA-QCGD------FASALELYVEHPVPDKITLILAAKACASLGDLDRGR 254

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG--AERLDMASWGAMMSALVH 526
           +IH   ++ G  S   + +SLI  Y     + ++    +G  A+  D+ SW ++++A + 
Sbjct: 255 EIHARAVELGLESDLLVANSLIGMYGKCYCVGDAKRLFDGLEAKNRDVISWNSIIAAYIL 314

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G + +A+ +F   ++   +P+      ++++C+ +   ++ + IH  +    F  EV V
Sbjct: 315 AGMSSQALELFRERMDV--EPNRITFIALIDACSTLCDLEQGRWIHERIRSSEFAREVAV 372

Query: 587 ASAVIDAYAKCGDIKGARMAFD-----------------------------QSFNSNDVI 617
            + ++  YAKCG I+ A   F+                                 S DV+
Sbjct: 373 ENGLLLMYAKCGSIEEAMAIFESMEGRRTLATSLVIMYCKFGCVADAMAVFSGMRSRDVV 432

Query: 618 VYNTLIMAYAHHGLVS-EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
            +  +I A++     S EA++ F +M L   +P + TF SV+ + +  GL+ +G    +S
Sbjct: 433 AWTAMITAFSQQEHTSMEAVDYFCQMDLDGSKPDEVTFASVLGSIARLGLLSRG----RS 488

Query: 677 MDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           +       G Q        L+DM S+ G L DAK   + +    +   + ++++    HG
Sbjct: 489 VHCDVLACGFQSDVVVGTALLDMYSKCGSLIDAKRAFDDLGGSRNLVSWNAMIAAMAKHG 548

Query: 734 NKELG 738
           +   G
Sbjct: 549 DWSSG 553



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 12/256 (4%)

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TW+ LL        D  VL     +    ++V+   +  ++  C RS++      IH  I
Sbjct: 10  TWSGLLP----QSIDPSVLA---RLGHKDLDVDNDVYATLLRECERSKSLSQGRYIHAHI 62

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           + +G S   ++ + L++ Y   G + ++ E  +   R ++ SW  M+ A    GH+ +A+
Sbjct: 63  LASGKSGKTFLGNLLVRMYGKCGSIADAKEAFDQIHRKNVFSWTIMLGAFADCGHHRQAI 122

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            I+H++V  G +PD     +I   C+ +  +Q  K+IH  V++ G  ++V VA+ ++  Y
Sbjct: 123 QIYHAMVLEGVRPDCVAFASIAGICSELQCFQAGKAIHDCVLEQGAESDVIVANNLVTMY 182

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +KCG I GAR  F +  N N  I +N +I A+A  G  + A+E++ +  +    P + T 
Sbjct: 183 SKCGRIDGARCVFRRIKNKNP-ISWNAMIAAFAQCGDFASALELYVEHPV----PDKITL 237

Query: 655 VSVMSACSHKGLVDKG 670
           +    AC+  G +D+G
Sbjct: 238 ILAAKACASLGDLDRG 253



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 5/165 (3%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D +  A  L     L     G  VH  ++  GF +D+ +   L+ MYSKCG      R
Sbjct: 464 KPDEVTFASVLGSIARLGLLSRGRSVHCDVLACGFQSDVVVGTALLDMYSKCGSLIDAKR 523

Query: 101 VFDEM-AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            FD++   RNLVSW  +++A  ++G++  G ++Y  M   G  PN+    +++ +C   G
Sbjct: 524 AFDDLGGSRNLVSWNAMIAAMAKHGDWSSGFELYRAMILEGVRPNDVTFTNMLFLCSHGG 583

Query: 160 AS--EFGYSIHC--FALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
               E G    C    L+  ++  P   CS+++   + G +  AE
Sbjct: 584 GGDRECGIWDACASIVLEFGVKITPDHHCSIVDVLGRSGRLEEAE 628


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 172/574 (29%), Positives = 299/574 (52%), Gaps = 3/574 (0%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYT 248
           YA  G V  A ++F  +       +N MI  Y   G  FEA+ V   ML  +    D YT
Sbjct: 65  YAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYT 124

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +   ++ CS +   + GR +HGL + S+    + ++N+L+ MY+    ++ A KVF+ M 
Sbjct: 125 YPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMK 184

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           +K V+SWNT+  G+ +N        +F++ + SG   +  +   +L  CG L +L++G +
Sbjct: 185 EKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRR 244

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +  L +    L ++ V+++L+ M+ +CG+++ A  VFDN+  +++ +W  +++GY  N  
Sbjct: 245 VHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGD 303

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L  F  +   G+  N  T   ++  C    N +    +HG ++K    S   + +S
Sbjct: 304 AKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETS 363

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           LI  Y     L  SF       R     W A++S  VH     EA+ +F  ++  G + +
Sbjct: 364 LIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEIN 423

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                ++L +   +   Q   +I+ ++++ GF + + VA+++ID Y+KCG ++ A   F+
Sbjct: 424 AATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFN 483

Query: 609 Q-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
               +  D+ V++ +I  Y  HG    A+ +F +M  + ++P+  TF SV+ +CSH G+V
Sbjct: 484 TIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMV 543

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D G  LFK M   +   P+ D Y C+VD+L R G +++A  +I+ MPF P   V+ +LL 
Sbjct: 544 DDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLG 603

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            C +H N ELGE A+  L  L P N   +VLL+K
Sbjct: 604 ACVMHENVELGEVAARWLFELEPGNTGNYVLLAK 637



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 260/516 (50%), Gaps = 5/516 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H H++  G  + I +++ L+A Y+ CGY     ++FDE+ +R  + +  ++   I  G
Sbjct: 42  QLHAHLITSGLLS-IDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKG 100

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           ++   +K++++M  +    P+ +    V+K C  +   E+G  +H   L  +   + FV 
Sbjct: 101 DYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVL 160

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+L  Y   G+V  A +VF ++    V  WN MI GY   G+   AL V + M+  G+ 
Sbjct: 161 NSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVE 220

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  + ++ L  C  + + ++GR++HGL +  +V     + NAL+DMY K   MD A  V
Sbjct: 221 IDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARLV 279

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M ++DV+SW ++  G+  N +     SLF    + G RPN VT +++L  C  L +L
Sbjct: 280 FDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNL 339

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  L    +      E  V +SLI M+ +C  + ++ SVF   S K    WN LLSG 
Sbjct: 340 KDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGC 399

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    + +  F  +   GVE+N  T   ++       + Q V  I+  ++++GF S  
Sbjct: 400 VHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNI 459

Query: 484 YICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            + +SLI  Y   G L+++ +  N    +  D+  W  +++     GH   AV++F  +V
Sbjct: 460 QVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMV 519

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           ++G KP++    ++L SC+  G       +  F++K
Sbjct: 520 QSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLK 555



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 213/437 (48%), Gaps = 9/437 (2%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
            + G+   C D++     I     L L E       G  +HG  +   F + +F+ N+L+
Sbjct: 111 EMLGSKDCCPDNYTYPFVIKACSELLLVE------YGRVLHGLTLVSKFGSHLFVLNSLL 164

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
           AMY  CG      +VFD M E+++VSW  +++   +NG  +  L ++  M  +G   +  
Sbjct: 165 AMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGA 224

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           +V SV+  C  +   E G  +H   ++ ++     V  ++++ YAK G +  A  VF ++
Sbjct: 225 SVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNM 283

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              DV  W +MI GY   G    AL++   M  EG+  +  T    L  C+ + +   GR
Sbjct: 284 VERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGR 343

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            +HG +++  +   +++  +LIDMY K + +  +F VF R + K  + WN L  G   NK
Sbjct: 344 CLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNK 403

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   LF K ++ G   N  T + LL   G L DL     +    +  GF+    V +
Sbjct: 404 LATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVAT 463

Query: 387 SLIYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           SLI ++ +CG++E AH +F+   V  ++I  W+ +++GY  +      +  F  + +SGV
Sbjct: 464 SLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGV 523

Query: 445 EVNGCTFFYVVETCCRS 461
           + N  TF  V+++C  +
Sbjct: 524 KPNDVTFTSVLQSCSHA 540



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 7/184 (3%)

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P      ++L    A  +   TK +H  +I  G    + + S ++  YA CG +  AR  
Sbjct: 19  PKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGL-LSIDIRSVLVATYAHCGYVHNARKL 77

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKG 665
           FD+       ++YN +I  Y   G   EAM++F +M    +  P   T+  V+ ACS   
Sbjct: 78  FDE-LRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELL 136

Query: 666 LVDKGCLLFK-SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           LV+ G +L   ++ S++G          L+ M    G +E+A+ V + M  + S   + +
Sbjct: 137 LVEYGRVLHGLTLVSKFGSHLF--VLNSLLAMYMNCGEVEEARKVFDAMK-EKSVVSWNT 193

Query: 725 LLSG 728
           +++G
Sbjct: 194 MING 197


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 177/608 (29%), Positives = 306/608 (50%), Gaps = 8/608 (1%)

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G    G  +H   +K       F+  ++LN Y K GD  +A+++F  +S  ++  +N++I
Sbjct: 73  GKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLI 132

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY       + + +       G+ +DKYT   AL  CS   +   G+ IHGLI+   + 
Sbjct: 133 SGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLG 192

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + + N+LIDMY K   +DYA  +F+     D +SWN+L  G+ +N    +  ++  K 
Sbjct: 193 SQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKM 252

Query: 339 ILSGSRPNHVTFSILLRQCGKLLD--LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
             +G   N  T    L+ C    +     G  L   A+  G   +  V ++L+ M+ + G
Sbjct: 253 HQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTG 312

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCF-----NCCDADVLKTFCNIWESGVEVNGCTF 451
           +++ A  +FD +  KN+  +N +++G        + C    L  F  +   G++ +  T+
Sbjct: 313 SLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTY 372

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             +++ C   E+ +   Q+H  + K G  S  YI S LI  Y   G + ++    N    
Sbjct: 373 SSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHN 432

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
           L +    AM+   +  G    A+++F+ L+   EKPDE+I  TI++SCA +G  +  + I
Sbjct: 433 LTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQI 492

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
                K+G +      ++ I  YAK GD+  A + F Q  N  D++ ++T+I + A HG 
Sbjct: 493 QGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENP-DIVSWSTMICSNAQHGH 551

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+  F+ MK   ++P+   F+ V+ ACSH+GLV++G   F +M+  Y M+       
Sbjct: 552 AMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCV 611

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R G L DA+ +I  + F+  P ++R+LLS CRIH +    +  ++K++ L P 
Sbjct: 612 CVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPL 671

Query: 752 NDAAHVLL 759
             A++VLL
Sbjct: 672 ASASYVLL 679



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/510 (25%), Positives = 229/510 (44%), Gaps = 11/510 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH H++K  F   +FLQNNL+ MY KCG      ++FD+M++ N+V++  ++S  +Q
Sbjct: 78  GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
               D  + ++   +  G   +++     +  C   G    G  IH   L   +     +
Sbjct: 138 MSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVL 197

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ Y+K G V  A  +F      D   WN++I GY   G   E L ++  M   G+
Sbjct: 198 TNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGL 257

Query: 243 TMDKYTFINALQGCSLVADFD----IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             + YT  +AL+ CS  ++F+     G  +H   I+  +   + +  AL+DMY K+  +D
Sbjct: 258 AFNTYTLGSALKACS--SNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLD 315

Query: 299 YAFKVFERMADKDVISWNTLFGGF-----SENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            A ++F++M DK+V+ +N +  G       E+K   +  +LF +    G +P+  T+S L
Sbjct: 316 DAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSL 375

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L+ C  + D     Q+  L    G L +E + S LI ++   G++  A   F+++    I
Sbjct: 376 LKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTI 435

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
                ++ GY  N      L  F  +     + +      ++ +C      +   QI G 
Sbjct: 436 VPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGH 495

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
             K G S      +S I  Y   G L  +       E  D+ SW  M+ +    GH  EA
Sbjct: 496 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 555

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +  F  +   G +P+ +    +L +C+  G
Sbjct: 556 LRFFELMKSCGIEPNHFAFLGVLIACSHRG 585



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 220/452 (48%), Gaps = 12/452 (2%)

Query: 230 ALNVVSSMLFEGIT----MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           ++++ SS +F   +    ++   ++  +Q  +     + G+ +H  +I++     + + N
Sbjct: 39  SVSLSSSQVFPAYSSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQN 98

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L++MY K      A K+F++M+  +++++N+L  G+ +  N  +   LF K    G + 
Sbjct: 99  NLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKL 158

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T +  L  C +  +L  G  +  L L  G   +  +T+SLI M+ +CG V+ A  +F
Sbjct: 159 DKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILF 218

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ- 464
           D+    +  +WN L++GY  N    ++L     + ++G+  N  T    ++ C  + N  
Sbjct: 219 DHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGC 278

Query: 465 QMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           +M G  +H   IK G      + ++L+  Y   G LD++ +  +     ++  + AMM+ 
Sbjct: 279 KMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAG 338

Query: 524 LVHQGH-----NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           L+ Q        ++A+ +F  +   G KP  +   ++L +C  +  ++  K +H  + K 
Sbjct: 339 LLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN 398

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G  ++ Y+ S +ID Y+  G +  A + F+ S ++  ++    +I  Y  +G    A+ +
Sbjct: 399 GLLSDEYIGSILIDLYSVLGSMMDALLCFN-SIHNLTIVPMTAMIXGYLQNGEFESALSL 457

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
           F ++     +P +    ++MS+C++ G++  G
Sbjct: 458 FYELLTYEEKPDEFIXSTIMSSCANMGMLRSG 489



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D    +  +S   N+     G Q+ GH  K+G +     QN+ I MY+K G       
Sbjct: 467 KPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 526

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F +M   ++VSW+ ++ +  Q+G     L+ +  MK+ G  PN FA   V+  C   G 
Sbjct: 527 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 586

Query: 161 SEFG 164
            E G
Sbjct: 587 VEEG 590


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 204/721 (28%), Positives = 355/721 (49%), Gaps = 65/721 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAA 120
            TQVHG + K  + ++  + N LI+MY  C  G      RVFD    R+L++W  ++S  
Sbjct: 185 ATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVY 244

Query: 121 IQNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVC-VSMGASEFGYSIHCFALKIR 175
            + G+      +++DM+         P E   GS++    +S G+S     +    LK  
Sbjct: 245 AKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSG 304

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA--HCGYGFEALNV 233
              + +VG ++++ +A+ G +  A+ +F S+   +    N +I G    HC    EA+ +
Sbjct: 305 CSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSE--EAVKI 362

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDI-------GRQIHGLIIRSEV-ECSISIVN 285
                   I ++  T++  L   S +A++ I       G++ HG ++R+ + +  I++ N
Sbjct: 363 FVGTR-NTIVVNADTYVVLL---SAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSN 418

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L++MY K   +D A K+F+ M   D ISWNT+     +N                    
Sbjct: 419 GLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQNG------------------- 459

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
                         L  L  G Q+ C A+  G   + +V++ L+ M+  CGA+     VF
Sbjct: 460 --------------LKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVF 505

Query: 406 DNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           ++++  +  +WN ++     +    ++ ++ F N+   G+  N  TF  ++         
Sbjct: 506 NSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVL 565

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE--FSNGAERLDMASWGAMMS 522
           ++  Q H A++K G      + ++LI  Y   G + NS E  FSN + R D  SW +M+S
Sbjct: 566 ELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDM-NSCEHLFSNMSGRRDAVSWNSMIS 624

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
             ++ G+  EA+     ++ +G+  D      ILN+CA++ A +R   +H F I+    +
Sbjct: 625 GYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLES 684

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +V V SA++D Y+KCG +  A   F+     N+   +N++I  YA HGL  +A+E F++M
Sbjct: 685 DVVVESALVDMYSKCGRVDYASKLFNSMTQRNE-FSWNSMISGYARHGLGRKALETFEEM 743

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
             +   P   TFVSV+SACSH GLV++G   F+ M   +G+ P  + Y C++D+L R G 
Sbjct: 744 LRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGILPQIEHYSCVIDLLGRAGK 802

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCR--IHGNK-ELGEWASEKLLLLLPKNDAAHVLL 759
           ++  K  I+ MP +P+  ++R++L  CR    G+K ELG  A   LL + P+N   +VL 
Sbjct: 803 IDKIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLA 862

Query: 760 S 760
           S
Sbjct: 863 S 863



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 157/690 (22%), Positives = 296/690 (42%), Gaps = 62/690 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  ++K G  +D+FL N+L+  Y+K        RVFDEM +RN VSWT ++S  +  G 
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 126 FDMGLKMYVDMKTN---GFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNP 180
            +   +++  M      G  P  F  G++++ C   G    G++  +H    K     N 
Sbjct: 142 TEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASNT 201

Query: 181 FVGCSVLNFYAK--LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
            V  ++++ Y    +G    A+RVF      D+  WNA++  YA  G       +   M 
Sbjct: 202 TVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQ 261

Query: 239 FEG----ITMDKYTFINALQGCSLVADFD-IGRQIHGLIIRSEVECSISIVNALIDMYIK 293
            E     +   ++TF + +   SL +    +  Q+   +++S     + + +AL+  + +
Sbjct: 262 REDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFAR 321

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP----NHVT 349
              +D A  +F  + +K+ ++ N L  G  +     +   +F      G+R     N  T
Sbjct: 322 HGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIF-----VGTRNTIVVNADT 376

Query: 350 FSILLRQCGKLLDLDLGLQLQCLA----LHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSV 404
           + +LL    +    + GL+    A    L  G  D +  V++ L+ M+ +CGA++ A  +
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +   +  +WN ++                     S ++ NG            S  Q
Sbjct: 437 FQLMEATDRISWNTII---------------------SALDQNGLKLL--------SAGQ 467

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               Q+H   +K G      + + L+K Y   G + + ++  N     D  SW +MM  +
Sbjct: 468 ----QVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVM 523

Query: 525 V-HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
              Q    E V +F++++  G  P++     +L + + +   +  K  H  V+K G   +
Sbjct: 524 ASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDD 583

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             V +A+I  YAK GD+      F       D + +N++I  Y ++G + EAM+    M 
Sbjct: 584 NVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLML 643

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            +       TF  +++AC+    +++G +   +   +  ++        LVDM S+ G +
Sbjct: 644 HSGQIMDCCTFSIILNACASVAALERG-MEMHAFGIRSHLESDVVVESALVDMYSKCGRV 702

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           + A  +   M  Q +   + S++SG   HG
Sbjct: 703 DYASKLFNSMT-QRNEFSWNSMISGYARHG 731



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 217/493 (44%), Gaps = 15/493 (3%)

Query: 52  SLSEN-LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           +L +N LK    G QVH   VK G   D  + N L+ MY +CG      +VF+ MA+ + 
Sbjct: 454 ALDQNGLKLLSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDE 513

Query: 111 VSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           VSW  ++   A         ++++ +M   G +PN+    +++     +   E G   H 
Sbjct: 514 VSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHA 573

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGF 228
             LK  +  +  V  ++++ YAK GD+ + E +F ++S   D   WN+MI GY + GY  
Sbjct: 574 AVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQ 633

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EA++ V  ML  G  MD  TF   L  C+ VA  + G ++H   IRS +E  + + +AL+
Sbjct: 634 EAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALV 693

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K   +DYA K+F  M  ++  SWN++  G++ +    +    F + + S   P+HV
Sbjct: 694 DMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHV 753

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           TF  +L  C     ++ GL+   +    G L +    S +I +  R G ++        +
Sbjct: 754 TFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRM 813

Query: 409 SYK-NITTWNELLSGYCFNCCDA-------DVLKTFCNIWESGVEVNG--CTFFYVVETC 458
             K N   W  +L   C    D        + L+    I E    VN    + F+     
Sbjct: 814 PMKPNALIWRTVLVA-CRQSKDGSKIELGREALRVLLEI-EPQNPVNYVLASNFHAATGM 871

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                +   G     + K    S  Y+   + + +  F         S    R+ +A W 
Sbjct: 872 WEDTAKARAGMRQATVKKEAGRSWTYLGIQIFRFHFKFTMCSAERSHSKQILRILIAQWN 931

Query: 519 AMMSALVHQGHNH 531
             + A+++ G N 
Sbjct: 932 WGLVAVLNIGMNR 944



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 253/584 (43%), Gaps = 60/584 (10%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H   +K  +  + F+   ++N YAK   +AAA RVF  +   +   W  ++ GY   G
Sbjct: 81  NLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQG 140

Query: 226 YGFEALNVVSSMLFE---GITMDKYTFINALQGCSLVADFDIG--RQIHGLIIRSEVECS 280
              EA  V  +ML E   G     +TF   L+ C       +G   Q+HGL+ ++E   +
Sbjct: 141 ITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYASN 200

Query: 281 ISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ NALI MY   +      A +VF+    +D+I+WN L   +++  +   T +LF   
Sbjct: 201 TTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDM 260

Query: 339 ILSGS----RPNHVTFSILLR----QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               S    RP   TF  L+       G    LD   Q+    L  G   +  V S+L+ 
Sbjct: 261 QREDSRIQLRPTEHTFGSLITATSLSSGSSAVLD---QVFVSVLKSGCSSDLYVGSALVS 317

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
            F R G ++ A  +F ++  KN  T N L+ G     C  + +K F     + + VN  T
Sbjct: 318 AFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGT-RNTIVVNADT 376

Query: 451 FFY----VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS-LIKSYVNFGQLDNSFEF 505
           +      + E     E  +   + HG +++TG +      S+ L+  Y   G +D++ + 
Sbjct: 377 YVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKI 436

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
               E  D  SW  ++SAL   G           L+ AG++                   
Sbjct: 437 FQLMEATDRISWNTIISALDQNGLK---------LLSAGQQ------------------- 468

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
                +H   +K G + +  V++ ++  Y +CG +      F+ S   +D + +N+++  
Sbjct: 469 -----VHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFN-SMADHDEVSWNSMMGV 522

Query: 626 YA-HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            A     +SE +E+F+ M    L P++ TFV++++A S   +++ G   F +   ++G+ 
Sbjct: 523 MASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELG-KQFHAAVLKHGVM 581

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
                   L+   +++G +   +H+   M  +     + S++SG
Sbjct: 582 DDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISG 625



 Score = 47.0 bits (110), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A    +++H  +IK G N ++++++ ++++YAK   +  A   FD+    N  + +  L+
Sbjct: 75  AANSPENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRN-AVSWTCLL 133

Query: 624 MAYAHHGLVSEAMEIFDKMKL---ANLQPSQATFVSVMSACSHKG 665
             Y   G+  EA  +F  M        +P+  TF +++ AC   G
Sbjct: 134 SGYVLQGITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGG 178


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  288 bits (738), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 293/577 (50%), Gaps = 4/577 (0%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVSSMLFEGIT 243
           S++N Y K   +  A +V   +   DV  WN  +   A+  Y   EA+ +   M    I 
Sbjct: 29  SLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPLQEAVQLFYLMRHTRIR 87

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           ++++ F + +   + + D   G  IH  + +   E  I I NA + MY+K+  ++  ++ 
Sbjct: 88  LNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M  +++ S N L  GF + +   Q   +  + ++ G  PN  TF  +L+ C    DL
Sbjct: 148 FKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDL 207

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G  +    +  G   + ++ +SL+ ++ +CG+   A  VF  +  +++ +W  L++G+
Sbjct: 208 NEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGF 267

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                 +  L+ F  +   G   N  TF  ++ +C    +  +  Q+H  I+K       
Sbjct: 268 VAEGYGSG-LRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND 326

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ ++L+  Y     L+++    N   + D+ +W  +++     G   +AV  F  +   
Sbjct: 327 FVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE 386

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G KP+E+ L + L+ C+ I      + +H   IK G + +++VASA++D YAKCG ++ A
Sbjct: 387 GVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDA 446

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            + FD    S D + +NT+I  Y+ HG   +A++ F+ M      P + TF+ V+SACSH
Sbjct: 447 EVVFD-GLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 505

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GL+++G   F S+   YG+ P+ + Y C+VD+L R G   + +  IE M    +  ++ 
Sbjct: 506 MGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWE 565

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++L  C++HGN E GE A+ KL  L P+ D+ ++LLS
Sbjct: 566 TVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLS 602



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 209/419 (49%), Gaps = 1/419 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +    A  +S + +L     G  +H  + K GF +DI + N  + MY K      G 
Sbjct: 86  IRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGW 145

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F  M   NL S   ++S        D G ++ + +   GF PN +   S++K C S G
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G +IH   +K  I  +  +  S++N YAK G    A +VF  I   DV  W A+I 
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALIT 265

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+   GYG   L + + ML EG   + YTFI+ L+ CS ++D D+G+Q+H  I+++ ++ 
Sbjct: 266 GFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDG 324

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +  +  AL+DMY K+  ++ A  +F R+  +D+ +W  +  G++++    +    F +  
Sbjct: 325 NDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 384

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G +PN  T +  L  C ++  LD G QL  +A+  G   +  V S+L+ M+ +CG VE
Sbjct: 385 REGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVE 444

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  VFD +  ++  +WN ++ GY  +      LK F  + + G   +  TF  V+  C
Sbjct: 445 DAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSAC 503



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/635 (22%), Positives = 296/635 (46%), Gaps = 6/635 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+++ +  ++   ++K G   D  L ++L+ +Y KC       +V +EM  +++  W   
Sbjct: 2   LRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK 61

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S+A         ++++  M+      N+F   S++    S+G + +G SIH    K   
Sbjct: 62  LSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGF 121

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  +  + +  Y K   V    + F ++  +++   N ++ G+       +   ++  
Sbjct: 122 ESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQ 181

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           +L EG   + YTFI+ L+ C+   D + G+ IHG +I+S +     + N+L+++Y K   
Sbjct: 182 LLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGS 241

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            +YA KVF  + ++DV+SW  L  GF   +  G    +F++ +  G  PN  TF  +LR 
Sbjct: 242 ANYACKVFGEIPERDVVSWTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILRS 300

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L D+DLG Q+    +       + V ++L+ M+ +   +E A ++F+ +  +++  W
Sbjct: 301 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 360

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++GY  +      +K F  +   GV+ N  T    +  C R        Q+H   IK
Sbjct: 361 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK 420

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G S   ++ S+L+  Y   G ++++    +G    D  SW  ++      G   +A+  
Sbjct: 421 AGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKA 480

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYA 595
           F ++++ G  PDE     +L++C+ +G  +  K     + K+ G    +   + ++D   
Sbjct: 481 FEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILG 540

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATF 654
           + G         ++   +++V+++ T++ A   HG +         MKL  L+P   + +
Sbjct: 541 RAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA--AMKLFELEPEIDSNY 598

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           + + +  + KG+ D      +++ S  G++  P C
Sbjct: 599 ILLSNMFAAKGMWDD-VTNVRALMSTRGVKKEPGC 632



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 142/292 (48%), Gaps = 3/292 (1%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQ  ++ F      F++   S S +L    LG QVH  IVK     + F+   L+ MY+K
Sbjct: 280 NQMLAEGFNPNMYTFISILRSCS-SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK 338

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
             +      +F+ + +R+L +WT+IV+   Q+G+ +  +K ++ M+  G  PNEF + S 
Sbjct: 339 NRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASS 398

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +   + G  +H  A+K     + FV  ++++ YAK G V  AE VF  + S D 
Sbjct: 399 LSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDT 458

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHG 270
             WN +I GY+  G G +AL    +ML EG   D+ TFI  L  CS +   + G++  + 
Sbjct: 459 VSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNS 518

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           L     +  +I     ++D+  ++          E M    +V+ W T+ G 
Sbjct: 519 LSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGA 570


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 170/597 (28%), Positives = 309/597 (51%), Gaps = 6/597 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHC 224
           +H   L + + ++  +  S++N Y    D  +A  VF  + I SD V  WN+++ GY+  
Sbjct: 26  VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSD-VYIWNSLMSGYSKN 84

Query: 225 GYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
               + L V   +L   I + D +TF N ++    +    +GR IH L+++S   C + +
Sbjct: 85  SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVV 144

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            ++L+ MY K +  + + +VF+ M ++DV SWNT+   F ++    +   LF +   SG 
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            PN V+ ++ +  C +LL L+ G ++    +  GF  +E V S+L+ M+ +C  +E+A  
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF  +  K++  WN ++ GY         ++    +   G   +  T   ++  C RS N
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
                 IHG +I++  ++  Y+  SLI  Y   G+ + +    +  ++    SW  M+S+
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            +  G+  +AV ++  +V  G KPD     ++L +C+ + A ++ K IH  + +    T+
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             + SA++D Y+KCG+ K A   F+ S    DV+ +  +I AY  HG   EA+  FD+M+
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFN-SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              L+P   T ++V+SAC H GL+D+G   F  M S+YG++P  + Y C++D+L R G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563

Query: 704 EDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            +A  +I+  P    +  +  +L S C +H    LG+  +  L+   P + + +++L
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 214/441 (48%), Gaps = 6/441 (1%)

Query: 18  FHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
           FH T +   RL   +    DSF   + I    +L          LG  +H  +VK G+  
Sbjct: 87  FHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG------REFLGRMIHTLVVKSGYVC 140

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+ + ++L+ MY+K   F   L+VFDEM ER++ SW  ++S   Q+GE +  L+++  M+
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           ++GF PN  ++   +  C  +   E G  IH   +K   E + +V  ++++ Y K   + 
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  VF  +    +  WN+MI GY   G     + +++ M+ EG    + T  + L  CS
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
              +   G+ IHG +IRS V   I +  +LID+Y K    + A  VF +       SWN 
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +   +    N  +   ++ + +  G +P+ VTF+ +L  C +L  L+ G Q+        
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +E + S+L+ M+ +CG  + A  +F+++  K++ +W  ++S Y  +    + L  F 
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500

Query: 438 NIWESGVEVNGCTFFYVVETC 458
            + + G++ +G T   V+  C
Sbjct: 501 EMQKFGLKPDGVTLLAVLSAC 521



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/540 (23%), Positives = 231/540 (42%), Gaps = 31/540 (5%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           +D+++ N+L++ YSK   F   L VF     + L++ ++ V                   
Sbjct: 69  SDVYIWNSLMSGYSKNSMFHDTLEVF-----KRLLNCSICV------------------- 104

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
                 P+ F   +V+K   ++G    G  IH   +K     +  V  S++  YAK    
Sbjct: 105 ------PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             + +VF  +   DV  WN +I  +   G   +AL +   M   G   +  +   A+  C
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           S +   + G++IH   ++   E    + +AL+DMY K   ++ A +VF++M  K +++WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           ++  G+    +      + ++ I+ G+RP+  T + +L  C +  +L  G  +    +  
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
               +  V  SLI ++ +CG   +A +VF         +WN ++S Y         ++ +
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   GV+ +  TF  V+  C +    +   QIH +I ++   +   + S+L+  Y   
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G    +F   N   + D+ SW  M+SA    G   EA+  F  + + G KPD   L  +L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518

Query: 557 NSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           ++C   G      K       K G    +   S +ID   + G +  A     Q+  ++D
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 4/323 (1%)

Query: 50  SLSLSENLKSRVL----GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           SL+++ +  SR+L    G ++H   VK GF  D ++ + L+ MY KC        VF +M
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             ++LV+W  ++   +  G+    +++   M   G  P++  + S++  C        G 
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH + ++  +  + +V CS+++ Y K G+   AE VF     D    WN MI  Y   G
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
             F+A+ V   M+  G+  D  TF + L  CS +A  + G+QIH  I  S +E    +++
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY K      AF++F  +  KDV+SW  +   +  +  P +    F +    G +P
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509

Query: 346 NHVTFSILLRQCGKLLDLDLGLQ 368
           + VT   +L  CG    +D GL+
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLK 532



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +     L     L +   G Q+H  I +     D  L + L+ MYSKCG      
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F+ + ++++VSWT+++SA   +G+    L  + +M+  G  P+   + +V+  C   G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525

Query: 160 ASEFG 164
             + G
Sbjct: 526 LIDEG 530



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 552 LGTILNSCA-AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           L ++L  C  +  + +R K +H  ++ LG   +V +  ++I+ Y  C D   AR  F+  
Sbjct: 6   LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL-QPSQATFVSVMSA 660
              +DV ++N+L+  Y+ + +  + +E+F ++   ++  P   TF +V+ A
Sbjct: 66  DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  288 bits (737), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 199/721 (27%), Positives = 339/721 (47%), Gaps = 41/721 (5%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP--NEFAVGS 150
           G      ++FD +   + V W  I+   + N   D  L  Y +MK++      + +   S
Sbjct: 42  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA------------ 198
           V+K C        G ++H   L+  +  +  V  S+LN Y+                   
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161

Query: 199 -AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
              +VF ++    V  WN +I  Y       EA+   S M+  GI     +F+N     S
Sbjct: 162 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 221

Query: 258 LVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            + DF     +HG++++  SE    + +V++ I MY +   +++A KVF+   +++   W
Sbjct: 222 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281

Query: 316 NTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           NT+   F +N    +   LF + + S  +  + VT    +     L   +L  QL    +
Sbjct: 282 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 341

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
               + +  V ++LI M+ RC +++ +  +FDN+  K++ +WN ++S +  N  + + L 
Sbjct: 342 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 401

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  + +  + V+  T   ++       N  +  Q HG +++ G    G + S LI  Y 
Sbjct: 402 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYA 460

Query: 495 NFGQLD---NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
             G ++   N FE S   ER D A+W +MMS     G   +A  I   +++    P+   
Sbjct: 461 KSGLIEAAQNVFEKSFSHER-DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 519

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L +IL +C   G     K +H F I+   +  V+VA+A+ID Y+K G I  A   F ++ 
Sbjct: 520 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKA- 578

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           N   ++ Y+T+I+ Y  HG+   A+ +F +M+ + +QP   T V+V+SACS+ GLVD+G 
Sbjct: 579 NEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGL 638

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEIMPFQPSPTVYRSLLSGCR 730
            +F+SM + Y +QPS + + C+ DML R G ++ A + VI +        ++ SLL+ CR
Sbjct: 639 QIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACR 698

Query: 731 IHGNKELGEWASEKLLLLLPKNDAA--HVLLSK--------------RKRQREGNLLDHE 774
           IH   ELG+  ++KLL +   N     HVLLS               RK+ RE  L    
Sbjct: 699 IHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKET 758

Query: 775 G 775
           G
Sbjct: 759 G 759



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 244/526 (46%), Gaps = 19/526 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-----------GYFGWGL--RVF 102
           + ++ V+G  VH H ++        + N+L+ MYS C           GY    L  +VF
Sbjct: 108 DTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVF 167

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M +R +V+W  +++  ++   +   +K +  M   G  P+  +  +V     S+G  +
Sbjct: 168 DTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFK 227

Query: 163 FGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
               +H   +K+  E   + +V  S +  YA+LG +  A++VF +    +   WN MI  
Sbjct: 228 NANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISA 287

Query: 221 YAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +    +  E + +   ++  E   +D+ T ++A+   S +  F++  Q+H  +I++    
Sbjct: 288 FVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVT 347

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + ++NALI MY + + +D +FK+F+ M +KDV+SWNT+   F +N    +   LF++  
Sbjct: 348 QVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMK 407

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
                 + VT + LL     L + D+G Q     L  G +  E + S LI M+ + G +E
Sbjct: 408 KQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSGLIE 466

Query: 400 MAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
            A +VF+      ++  TWN ++SGY  N            + +  V  N  T   ++  
Sbjct: 467 AAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPA 526

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C  S       Q+HG  I+       ++ ++LI  Y   G + ++    + A    + ++
Sbjct: 527 CNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTY 586

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             M+      G    A+ +FH + ++G +PD   L  +L++C+  G
Sbjct: 587 STMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAG 632



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 174/331 (52%), Gaps = 7/331 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L  ++S + +L+   L  Q+H  ++K      + + N LIAMYS+C       ++F
Sbjct: 313 DEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIF 372

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M E+++VSW  ++SA +QNG  D  L ++ +MK    M +   V +++     +   +
Sbjct: 373 DNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPD 432

Query: 163 FGYSIHCFALKIRIEKNPFVGCS--VLNFYAKLGDVAAAERVF-YSISSD-DVGCWNAMI 218
            G   H + L+  I+   F G    +++ YAK G + AA+ VF  S S + D   WN+M+
Sbjct: 433 IGKQTHGYLLRNGIQ---FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 489

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G   +A  ++  ML + +  +  T  + L  C+     D G+Q+HG  IR++++
Sbjct: 490 SGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLD 549

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ +  ALIDMY KS  + +A  VF +  +K +++++T+  G+ ++        +FH+ 
Sbjct: 550 QNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRM 609

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
             SG +P+ VT   +L  C     +D GLQ+
Sbjct: 610 QKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 640



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 227/469 (48%), Gaps = 15/469 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           VHG +VKLG  + ND+++ ++ I MY++ G   +  +VFD   ERN   W  ++SA +QN
Sbjct: 232 VHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQN 291

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                G++++   +++     +E  + S +     +   E    +H F +K        V
Sbjct: 292 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 351

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y++   +  + ++F ++   DV  WN MI  +   G   EAL +   M  + +
Sbjct: 352 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDL 411

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T    L   S + + DIG+Q HG ++R+ ++    + + LIDMY KS  ++ A  
Sbjct: 412 MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQN 470

Query: 303 VFER--MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           VFE+    ++D  +WN++  G+++N    Q   +  + +     PN VT + +L  C   
Sbjct: 471 VFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPS 530

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             +D G QL   ++         V ++LI M+ + G++  A +VF   + K+I T++ ++
Sbjct: 531 GYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMI 590

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAIIK 476
            GY  +      L  F  + +SG++ +  T   V+  C  +    E  Q+   +   +  
Sbjct: 591 LGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMR-TVYN 649

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLD-MASWGAMMSA 523
              S+  + C + +      G++D ++EF  G  E+ + M  WG++++A
Sbjct: 650 IQPSTEHFCCVADMLGRA--GRVDKAYEFVIGLGEKGNVMEIWGSLLAA 696



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 128/290 (44%), Gaps = 19/290 (6%)

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV--NGC 449
            C+ G + +A  +FD +   +   WN ++ G   N    + L  + N+  S  +V  +  
Sbjct: 38  LCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSY 97

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T+  V++ C  + N  +   +H   ++   +    + +SL+  Y          +  +G 
Sbjct: 98  TYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGY 157

Query: 510 ERLDM-------------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
            R D+              +W  +++  V      EAV  F  +++ G KP       + 
Sbjct: 158 SRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVF 217

Query: 557 NSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
            + +++G ++    +H  ++KLG  +  ++YV S+ I  YA+ G ++ A+  FD     N
Sbjct: 218 PAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERN 277

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEI-FDKMKLANLQPSQATFVSVMSACSH 663
              V+NT+I A+  +    E +++ F  ++  +    + T +S +SA SH
Sbjct: 278 -TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASH 326


>gi|218546775|sp|Q9SII7.2|PP159_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17210
          Length = 736

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 195/622 (31%), Positives = 327/622 (52%), Gaps = 18/622 (2%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +  A  +G++   +  Y +++  G   N+ F    V K C  +     G  I    LK  
Sbjct: 18  IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRG 77

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E    VG S+ +FY K GD+ +  R F  ++S D   WN ++ G    G+  E L   S
Sbjct: 78  FESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 137

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKS 294
            +   G   +  T +  +  C  +  FD G +IHG +IRS   C IS V N+++ MY  S
Sbjct: 138 KLRVWGFEPNTSTLVLVIHACRSLW-FD-GEKIHGYVIRSGF-CGISSVQNSILCMYADS 194

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSIL 353
             +  A K+F+ M+++DVISW+ +   + ++K P     LF + +    + P+ VT + +
Sbjct: 195 DSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 253

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           L+ C  + D+D+G  +   ++  GF L +  V +SLI M+ +   V+ A  VFD  + +N
Sbjct: 254 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 313

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I +WN +L+G+  N    + L+ F  + +  VEV+  T   ++  C   E       IHG
Sbjct: 314 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 373

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            II+ G+ S     SSLI +Y +   +D++    +     D+ S   M+S L H G + E
Sbjct: 374 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 433

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--LGFNTEVYVASAV 590
           A++IF  +    + P+   + ++LN+C+     + +K  H   I+  L  N ++ V +++
Sbjct: 434 AISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSI 489

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           +DAYAKCG I+ AR  FDQ     ++I +  +I AYA +GL  +A+ +FD+MK     P+
Sbjct: 490 VDAYAKCGAIEMARRTFDQ-ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 548

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             T+++ +SAC+H GLV KG ++FKSM  +   +PS   Y C+VDMLSR G ++ A  +I
Sbjct: 549 AVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELI 607

Query: 711 EIMP--FQPSPTVYRSLLSGCR 730
           + +P   +   + + ++LSGCR
Sbjct: 608 KNLPEDVKAGASAWGAILSGCR 629



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/545 (25%), Positives = 255/545 (46%), Gaps = 11/545 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +   ++K GF + + + N++   Y KCG    GLR FD M  R+ VSW +IV   + 
Sbjct: 66  GRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLD 125

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  + GL  +  ++  GF PN   +  V+  C S+     G  IH + ++        V
Sbjct: 126 YGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSV 183

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+L  YA   D  +A ++F  +S  DV  W+ +I  Y         L +   M+ E  
Sbjct: 184 QNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK 242

Query: 243 T-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYA 300
           T  D  T  + L+ C+++ D D+GR +HG  IR   + + + + N+LIDMY K   +D A
Sbjct: 243 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSA 302

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           F+VF+    ++++SWN++  GF  N+   +   +FH  +      + VT   LLR C K 
Sbjct: 303 FRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-KF 361

Query: 361 LDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            +  L  + +  + +  G+   E   SSLI  +  C  V+ A +V D+++YK++ + + +
Sbjct: 362 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 421

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SG        + +  FC++ ++    N  T   ++  C  S + +     HG  I+   
Sbjct: 422 ISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSL 478

Query: 480 SSCGY-ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           +     + +S++ +Y   G ++ +    +     ++ SW  ++SA    G   +A+ +F 
Sbjct: 479 AINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 538

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            + + G  P+       L++C   G  ++   I   +++      +   S ++D  ++ G
Sbjct: 539 EMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAG 598

Query: 599 DIKGA 603
           +I  A
Sbjct: 599 EIDTA 603



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 195/460 (42%), Gaps = 50/460 (10%)

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W  +  G+SE +  G   +            +   F I+ + C KL  L  G  +Q   L
Sbjct: 27  WREVVSGYSEIQRAGVQFN------------DPFVFPIVFKACAKLSWLFQGRCIQASLL 74

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             GF    +V +S+   + +CG +      FD ++ ++  +WN ++ G      + + L 
Sbjct: 75  KRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 134

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
            F  +   G E N  T   V+  C    +    G+ IHG +I++GF     + +S++  Y
Sbjct: 135 WFSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMY 191

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYIL 552
            +   L     F   +ER D+ SW  ++ + V        + +F  +V EA  +PD   +
Sbjct: 192 ADSDSLSARKLFDEMSER-DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 250

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
            ++L +C  +      +S+H F I+ GF+  +V+V +++ID Y+K  D+  A   FD++ 
Sbjct: 251 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 310

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS--------- 662
             N ++ +N+++  + H+    EA+E+F  M    ++  + T VS++  C          
Sbjct: 311 CRN-IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 369

Query: 663 --HKGLVDKG-----------------CLLFKSMDSQYGMQPSPDCYGC--LVDMLSRNG 701
             H  ++ +G                 C L     +        D   C  ++  L+  G
Sbjct: 370 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG 429

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
             ++A  +   M   P+     SLL+ C +  +    +WA
Sbjct: 430 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 469



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           I L  + S+S +L++       HG  ++     NDI +  +++  Y+KCG      R FD
Sbjct: 451 ISLLNACSVSADLRT---SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFD 507

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           ++ E+N++SWT+I+SA   NG  D  L ++ +MK  G+ PN     + +  C   G  + 
Sbjct: 508 QITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKK 567

Query: 164 GYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSISSD---DVGCWNAMI 218
           G  I  F   +  +  P +     +++  ++ G++  A  +  ++  D       W A++
Sbjct: 568 GLMI--FKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 625

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMD 245
            G   C   F+ L + S ++ E + ++
Sbjct: 626 SG---CRNRFKKLIITSEVVAEVLELE 649


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 296/578 (51%), Gaps = 4/578 (0%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S++  +   G +  A   F  ++       N MI G+A      +AL    +ML  G   
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D++TF   L+ C+       GR  H  +I+  +   +   N+L+ +Y K   +  A +VF
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL--LRQCGKLLD 362
           + M  +D++SWNT+  G+  N       + F + +    +  H +  ++  L  C     
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFRE-MNDALQVGHDSVGVIAALAACCLESA 237

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L LG ++   A+  G   +  V +SL+ M+C+CG V  A +VF  +  + + TWN ++ G
Sbjct: 238 LALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGG 297

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    D    F  +   G +V   T   ++  C ++E+      +H  +++  F   
Sbjct: 298 YALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPH 357

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L++ Y   G++++S +         + SW  M++A ++     EA+ +F  L+ 
Sbjct: 358 VVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLN 417

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
               PD + + T++ +   +G+ ++ K +H +++KLG+     + +AV+  YA+CG+I  
Sbjct: 418 QPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVA 477

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +R  FD+     DVI +NT+I+ YA HG    A+E+FD+MK + ++P+++TFVSV++ACS
Sbjct: 478 SREIFDK-MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACS 536

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
             GL  +G   F SM  +YGM P  + YGC+ D+L R G L +    IE MP  P+  ++
Sbjct: 537 VSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIW 596

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            SLL+  R   + ++ E+A+E++  L   N   +V+LS
Sbjct: 597 GSLLTASRNKNDIDIAEYAAERIFQLEHNNTGCYVVLS 634



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 221/468 (47%), Gaps = 28/468 (5%)

Query: 3   ILKRAFLFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKD----PIFL---AKSLSLSE 55
           ++ R F  AD P     A R  +           D+  R D    P+ L   A++ +L E
Sbjct: 90  VMIRGFADADLPLDALAAYRAML-----------DAGARPDRFTFPVVLKCCARAGALGE 138

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
                  G   H  ++KLG   D++  N+L+A+Y+K G  G   RVFD M  R++VSW  
Sbjct: 139 -------GRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNT 191

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG--SVMKVCVSMGASEFGYSIHCFALK 173
           +V   + NG   + L  + +M  +       +VG  + +  C    A   G  IH +A++
Sbjct: 192 MVDGYVSNGMGALALACFREM-NDALQVGHDSVGVIAALAACCLESALALGREIHGYAIR 250

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +E++  VG S+++ Y K G+V  AE VF  +    V  WN MIGGYA      +A + 
Sbjct: 251 HGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDC 310

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M  +G  ++  T IN L  C+       GR +H  ++R      + +  AL++MY K
Sbjct: 311 FMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGK 370

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ + K+F ++ DK ++SWN +   +   +   +  +LF + +     P++ T + +
Sbjct: 371 VGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTV 430

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           +     L  +    Q+    +  G+ D   + +++++M+ RCG +  +  +FD +  K++
Sbjct: 431 VPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDV 490

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            +WN ++ GY  +      L+ F  +  SG+E N  TF  V+  C  S
Sbjct: 491 ISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVS 538



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 197/436 (45%), Gaps = 1/436 (0%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L  Y  M   G  P+ F    V+K C   GA   G + H   +K+ +  + +   S++ 
Sbjct: 104 ALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVA 163

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
            YAKLG V  AERVF  + + D+  WN M+ GY   G G  AL     M     +  D  
Sbjct: 164 LYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSV 223

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
             I AL  C L +   +GR+IHG  IR  +E  + +  +L+DMY K   + +A  VF +M
Sbjct: 224 GVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKM 283

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             + V++WN + GG++ N+ P      F +  + G +   VT   LL  C +      G 
Sbjct: 284 PLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGR 343

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +    +   FL    + ++L+ M+ + G VE +  +F  ++ K + +WN +++ Y +  
Sbjct: 344 SVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYME 403

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              + +  F  +    +  +  T   VV       + +   Q+H  I+K G+     I +
Sbjct: 404 MYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +++  Y   G +  S E  +     D+ SW  ++      G    A+ +F  +  +G +P
Sbjct: 464 AVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEP 523

Query: 548 DEYILGTILNSCAAIG 563
           +E    ++L +C+  G
Sbjct: 524 NESTFVSVLTACSVSG 539



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/466 (21%), Positives = 198/466 (42%), Gaps = 10/466 (2%)

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +  S S   +LI  ++ +  MD A   F  +        N +  GF++   P    + + 
Sbjct: 50  ISSSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYR 109

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
             + +G+RP+  TF ++L+ C +   L  G       +  G   +    +SL+ ++ + G
Sbjct: 110 AMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLG 169

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVV 455
            V  A  VFD +  ++I +WN ++ GY  N   A  L  F  + ++  V  +       +
Sbjct: 170 LVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAAL 229

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM- 514
             CC      +  +IHG  I+ G      + +SL+  Y   G   N F   N   ++ + 
Sbjct: 230 AACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCG---NVFFAENVFAKMPLR 286

Query: 515 --ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
              +W  M+          +A   F  +   G + +      +L +CA   +    +S+H
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVH 346

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            +V++  F   V + +A+++ Y K G ++ +   F Q      ++ +N +I AY +  + 
Sbjct: 347 AYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQ-ITDKTLVSWNNMIAAYMYMEMY 405

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
            EA+ +F ++    L P   T  +V+ A    G + + C    S   + G   S      
Sbjct: 406 QEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSI-RQCKQMHSYIVKLGYGDSTLIMNA 464

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           ++ M +R G +  ++ + + MP +   + + +++ G  IHG  ++ 
Sbjct: 465 VMHMYARCGNIVASREIFDKMPGKDVIS-WNTIIIGYAIHGQGKIA 509



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 146/325 (44%), Gaps = 18/325 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+     +S + G  VH ++V+  F   + L+  L+ MY K G      ++F ++ ++ L
Sbjct: 330 LTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTL 389

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  +++A +    +   + +++++      P+ F + +V+   V +G+      +H +
Sbjct: 390 VSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSY 449

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K+    +  +  +V++ YA+ G++ A+  +F  +   DV  WN +I GYA  G G  A
Sbjct: 450 IVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIA 509

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVA-------DFDIGRQIHGLIIRSEVECSISI 283
           L +   M   G+  ++ TF++ L  CS+         +F+  +Q +G+I +      I  
Sbjct: 510 LEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQ------IEH 563

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSG 342
              + D+  ++  +    +  E M        W +L    S NKN    A    + I   
Sbjct: 564 YGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA-SRNKNDIDIAEYAAERIFQL 622

Query: 343 SRPN---HVTFSILLRQCGKLLDLD 364
              N   +V  S +    G+  D++
Sbjct: 623 EHNNTGCYVVLSSMYADAGRWEDVE 647


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 179/647 (27%), Positives = 330/647 (51%), Gaps = 40/647 (6%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++++    G  +   ++H   LK+  E++ F+G ++++ Y KLG V  A++VF  +S  +
Sbjct: 103 LLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + A+I G++   +  EA+ +  +ML  GI  ++YTF+  L  C    D+ +G Q+HG
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           ++++  +   + I NAL+ +Y K   +D   ++FE M ++D+ SWNT+     +     +
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 331 TASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               F    L  G + +H + S LL  C   +    G QL  LAL  G     +V+SSLI
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADV---------------- 432
             + +CG+      +F+ +  +++ TW  +++ Y  F   D+ V                
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 433 --------------LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
                         L+ F  + E GVE++ CT   ++  C   ++ ++  QI G ++K G
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFE--FSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             S   I ++L+  Y   G+++++ +  +    E    A   +M+      G  +EA+++
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISL 520

Query: 537 FHS-LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           FHS   E     DE +  +IL+ C +IG ++  K +H   +K G  TE  V +A +  Y+
Sbjct: 521 FHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYS 580

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC ++  A   F+ + N  D++ +N L+  +  H    +A+ I+ KM+ A ++P   TF 
Sbjct: 581 KCWNMDDAVRVFN-TMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 656 SVMSACSHK--GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            ++SA  H    LVD    LF SM++++ ++P+ + Y   + +L R G LE+A+  I  M
Sbjct: 640 LIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNM 699

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P +P   V+R+LL+ CRI+ N+ L + A+  +L + PK+  +++L S
Sbjct: 700 PLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKS 746



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 57/576 (9%)

Query: 43  DPIFLAKSLSLSEN----------LKSRV----LGTQVHGHIVKLGFTNDIFLQNNLIAM 88
           +P+F ++SL+ S +          L +R     L   VH   +KL    DIFL N LI+ 
Sbjct: 82  EPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISA 139

Query: 89  YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
           Y K G      +VF  ++  N+VS+T ++S   ++   D  ++++  M  +G  PNE+  
Sbjct: 140 YLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTF 199

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            +++  C+     + G  +H   +K+ +    F+  +++  Y K G +    R+F  +  
Sbjct: 200 VAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPE 259

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQ 267
            D+  WN +I          EA +    M L +G+ +D ++    L  C+       G+Q
Sbjct: 260 RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQ 319

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKS---------------------SGM--------- 297
           +H L ++  +E  +S+ ++LI  Y K                      +GM         
Sbjct: 320 LHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGM 379

Query: 298 -DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            D A +VF +M  ++ IS+N +  G S N +  +   LF + +  G   +  T + ++  
Sbjct: 380 LDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITA 439

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT- 415
           CG L    +  Q+Q   +  G L    + ++L+ M+ RCG +E A  +F   S +N  T 
Sbjct: 440 CGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTA 499

Query: 416 -WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN-QQMVGQIHGA 473
               ++ GY  N    + +  F +    G  V        + + C S    +M  Q+H  
Sbjct: 500 MLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCH 559

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K+G  +   + ++ +  Y     +D++    N     D+ SW  +++  V      +A
Sbjct: 560 ALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKA 619

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           + I+  + +AG KPD      I      I AY+ T+
Sbjct: 620 LGIWKKMEKAGIKPDSITFALI------ISAYKHTE 649



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 185/400 (46%), Gaps = 44/400 (11%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG--------------------------YFG 96
           G Q+H   +K+G  + + + ++LI  Y+KCG                          Y  
Sbjct: 317 GQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYME 376

Query: 97  WGL-----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           +G+      VF++M +RN +S+  +++   +N +    L+++++M   G   ++  + S+
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISSD 209
           +  C  + + +    I  F +K  I  N  +  ++++ Y + G +  AE++FY  S+ +D
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQI 268
                 +MI GYA  G   EA+++  S   EG I MD+    + L  C  +   ++G+Q+
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQM 556

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H   ++S +     + NA + MY K   MD A +VF  M  +D++SWN L  G   +   
Sbjct: 557 HCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQG 616

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   ++ K   +G +P+ +TF++++         +L L   C +L      E N+  +L
Sbjct: 617 DKALGIWKKMEKAGIKPDSITFALII---SAYKHTELNLVDSCRSLFVSMETEHNIKPTL 673

Query: 389 ------IYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
                 I +  R G +E A     N+  + ++  W  LL+
Sbjct: 674 EHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +     LSL  ++    +G Q+H H +K G   +  + N  ++MYSKC      +RVF
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M  +++VSW  +V+  + + + D  L ++  M+  G  P+      ++    +   +E
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIIS---AYKHTE 649

Query: 163 FGYSIHCFALKIRIEKNPFVG------CSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
                 C +L + +E    +        S ++   + G +  AE+   ++    DV  W 
Sbjct: 650 LNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 216 AMI 218
           A++
Sbjct: 710 ALL 712


>gi|302767656|ref|XP_002967248.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
 gi|300165239|gb|EFJ31847.1| hypothetical protein SELMODRAFT_61142 [Selaginella moellendorffii]
          Length = 672

 Score =  288 bits (737), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 183/675 (27%), Positives = 320/675 (47%), Gaps = 11/675 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  + K G++ + +L N L+ MY KCG        F  + ERNL +WT+ ++A  Q
Sbjct: 4   GKTIHDQMSKDGYSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTAFAQ 63

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+    + ++  M  +G   +  A  + +  C S+G    G S+H        + +  +
Sbjct: 64  NGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDAVL 123

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++N YAK G+ A AE +F  +       + A+I  Y+    G EAL +  +M  EG+
Sbjct: 124 RVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAMHLEGV 183

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK   ++AL  C+   D   GR IH  II    +   ++ +AL+ MY +   ++ A  
Sbjct: 184 APDKVAMLSALGACASEPD---GRAIHACIICCGSDGDDTVASALVSMYGRFQMLESAKS 240

Query: 303 VF--ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           VF   R+    V  WN++   + ++ +  +   LF K  L G  P+ VT   +L  C  L
Sbjct: 241 VFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVL 300

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNE 418
             LD    +    L      +  V  SL+ ++  C ++E A +VF   +   ++   WN 
Sbjct: 301 RKLDKARMIHA-QLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCIAWNT 359

Query: 419 LLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           +++ Y   C D  + LK F  +   GVE    T+  V+              +H  I   
Sbjct: 360 MIAAYA-ECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSC 418

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G     ++ +SL++ Y + G+L ++    +  ER D  SW  +M      G    A+ +F
Sbjct: 419 GLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALVVF 478

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           H +   G + +   L  ++ +C   G   + KSIH  V+ +G      V SA++  Y K 
Sbjct: 479 HGMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMYGKF 538

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  A   F+   ++ + + +N L+  +A  G   E +E+   M+L  ++   A+++ V
Sbjct: 539 GMLDRAMSCFND-ISAKNTVAWNALMSGFAQQGQSVETVELSRAMQLQGMESDSASYLVV 597

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + ACSH GLV++    F ++     +  + + YGCL+D+L+R G+L+ A+ +   MPF+P
Sbjct: 598 LFACSHGGLVEEALSCFSNLVEDGSVAANDEHYGCLIDLLARAGWLDRAEDLFRSMPFEP 657

Query: 718 SPTVYRSLLSGCRIH 732
             T + SL+  C++H
Sbjct: 658 DSTSWMSLVGACKLH 672



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 158/627 (25%), Positives = 272/627 (43%), Gaps = 50/627 (7%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A ++    +L    +G  +H  I    F +D  L+ +LI MY+K G F     +F
Sbjct: 85  DRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEELF 144

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMG---LKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             +  ++ V++T +++A  Q   F MG   L +Y  M   G  P++ A+ S +  C S  
Sbjct: 145 QRLELKSAVAYTALIAAYSQ---FKMGREALGLYRAMHLEGVAPDKVAMLSALGACAS-- 199

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISSDDVGCWNAM 217
               G +IH   +    + +  V  ++++ Y +   + +A+ VF+   +    V  WN+M
Sbjct: 200 -EPDGRAIHACIICCGSDGDDTVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSM 258

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  Y   G+  EAL +   M  EG+  D  T +  L  CS++   D  R IH  + R+ V
Sbjct: 259 ISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKARMIHAQL-RARV 317

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLF 335
           +   ++V++L+++Y +   ++ A  VF   A   +D I+WNT+   ++E  +PG    LF
Sbjct: 318 DADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCIAWNTMIAAYAECGDPGMALKLF 377

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
               L G  P  VT+  +L     L  L  G  L      CG  +   V++SL+  +  C
Sbjct: 378 TLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSC 437

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           G +  A +VF ++  ++  +WN ++  Y    CCD   L  F  +   GV  N  T   V
Sbjct: 438 GRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDT-ALVVFHGMELEGVRANVITLTNV 496

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           V  C  + +      IH  ++  G      + S+L+  Y  FG LD +    N     + 
Sbjct: 497 VTACTVTGDAAKGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAMSCFNDISAKNT 556

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            +W A+MS    QG + E V +  ++   G + D      +L +C+  G  +   S    
Sbjct: 557 VAWNALMSGFAQQGQSVETVELSRAMQLQGMESDSASYLVVLFACSHGGLVEEALSCFSN 616

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           +++                              D S  +ND   Y  LI   A  G +  
Sbjct: 617 LVE------------------------------DGSVAANDEH-YGCLIDLLARAGWLDR 645

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSAC 661
           A ++F  M     +P   +++S++ AC
Sbjct: 646 AEDLFRSMP---FEPDSTSWMSLVGAC 669



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/550 (24%), Positives = 246/550 (44%), Gaps = 12/550 (2%)

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G +IH    K    +  ++G  +++ Y K G +  AE  F+SI   ++  W   +  +
Sbjct: 2   EQGKTIHDQMSKDGYSRETYLGNLLVDMYGKCGSLRDAEAAFHSIRERNLFTWTIAMTAF 61

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A  G   +A+++  +M  +G+ +D+  F  A+  CS + D  IGR +H  I  S  +   
Sbjct: 62  AQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHIGRSLHSTIATSSFQSDA 121

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +  +LI+MY K+     A ++F+R+  K  +++  L   +S+ K   +   L+    L 
Sbjct: 122 VLRVSLINMYAKAGEFALAEELFQRLELKSAVAYTALIAAYSQFKMGREALGLYRAMHLE 181

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+ V     L  C    D   G  +    + CG   ++ V S+L+ M+ R   +E A
Sbjct: 182 GVAPDKVAMLSALGACASEPD---GRAIHACIICCGSDGDDTVASALVSMYGRFQMLESA 238

Query: 402 HSVF--DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            SVF    V   ++  WN ++S Y  +    + L+ F  +   GV  +  T   ++  C 
Sbjct: 239 KSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCS 298

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMAS 516
                     IH A ++    +   +  SL+  Y     L+++   F    G  R D  +
Sbjct: 299 VLRKLDKARMIH-AQLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGAR-DCIA 356

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  M++A    G    A+ +F  +   G +P E     +L + +++GA  R  S+H  + 
Sbjct: 357 WNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIR 416

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G +   +V+++++  Y  CG +  A   F  S    D + +NT++  Y  HG    A+
Sbjct: 417 SCGLDELPFVSNSLMQFYGSCGRLSSATAVF-HSLERRDEVSWNTIMGLYTQHGCCDTAL 475

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M+L  ++ +  T  +V++AC+  G   KG  +   + S  G++        LV M
Sbjct: 476 VVFHGMELEGVRANVITLTNVVTACTVTGDAAKGKSIHARVLSM-GLEHHSAVGSALVAM 534

Query: 697 LSRNGYLEDA 706
             + G L+ A
Sbjct: 535 YGKFGMLDRA 544


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 199/721 (27%), Positives = 339/721 (47%), Gaps = 41/721 (5%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP--NEFAVGS 150
           G      ++FD +   + V W  I+   + N   D  L  Y +MK++      + +   S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA------------ 198
           V+K C        G ++H   L+  +  +  V  S+LN Y+                   
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 199 -AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
              +VF ++    V  WN +I  Y       EA+   S M+  GI     +F+N     S
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197

Query: 258 LVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            + DF     +HG++++  SE    + +V++ I MY +   +++A KVF+   +++   W
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257

Query: 316 NTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           NT+   F +N    +   LF + + S  +  + VT    +     L   +L  QL    +
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
               + +  V ++LI M+ RC +++ +  +FDN+  K++ +WN ++S +  N  + + L 
Sbjct: 318 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 377

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  + +  + V+  T   ++       N  +  Q HG +++ G    G + S LI  Y 
Sbjct: 378 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYA 436

Query: 495 NFGQLD---NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
             G ++   N FE S   ER D A+W +MMS     G   +A  I   +++    P+   
Sbjct: 437 KSGLIEAAQNVFEKSFSHER-DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 495

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L +IL +C   G     K +H F I+   +  V+VA+A+ID Y+K G I  A   F ++ 
Sbjct: 496 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKA- 554

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           N   ++ Y+T+I+ Y  HG+   A+ +F +M+ + +QP   T V+V+SACS+ GLVD+G 
Sbjct: 555 NEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGL 614

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEIMPFQPSPTVYRSLLSGCR 730
            +F+SM + Y +QPS + + C+ DML R G ++ A + VI +        ++ SLL+ CR
Sbjct: 615 QIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACR 674

Query: 731 IHGNKELGEWASEKLLLLLPKNDAA--HVLLSK--------------RKRQREGNLLDHE 774
           IH   ELG+  ++KLL +   N     HVLLS               RK+ RE  L    
Sbjct: 675 IHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKET 734

Query: 775 G 775
           G
Sbjct: 735 G 735



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 244/526 (46%), Gaps = 19/526 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-----------GYFGWGL--RVF 102
           + ++ V+G  VH H ++        + N+L+ MYS C           GY    L  +VF
Sbjct: 84  DTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVF 143

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M +R +V+W  +++  ++   +   +K +  M   G  P+  +  +V     S+G  +
Sbjct: 144 DTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFK 203

Query: 163 FGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
               +H   +K+  E   + +V  S +  YA+LG +  A++VF +    +   WN MI  
Sbjct: 204 NANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISA 263

Query: 221 YAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +    +  E + +   ++  E   +D+ T ++A+   S +  F++  Q+H  +I++    
Sbjct: 264 FVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVT 323

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + ++NALI MY + + +D +FK+F+ M +KDV+SWNT+   F +N    +   LF++  
Sbjct: 324 QVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMK 383

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
                 + VT + LL     L + D+G Q     L  G +  E + S LI M+ + G +E
Sbjct: 384 KQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDMYAKSGLIE 442

Query: 400 MAHSVFDN--VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
            A +VF+      ++  TWN ++SGY  N            + +  V  N  T   ++  
Sbjct: 443 AAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPA 502

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C  S       Q+HG  I+       ++ ++LI  Y   G + ++    + A    + ++
Sbjct: 503 CNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTY 562

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
             M+      G    A+ +FH + ++G +PD   L  +L++C+  G
Sbjct: 563 STMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAG 608



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 174/331 (52%), Gaps = 7/331 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L  ++S + +L+   L  Q+H  ++K      + + N LIAMYS+C       ++F
Sbjct: 289 DEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIF 348

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M E+++VSW  ++SA +QNG  D  L ++ +MK    M +   V +++     +   +
Sbjct: 349 DNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPD 408

Query: 163 FGYSIHCFALKIRIEKNPFVGCS--VLNFYAKLGDVAAAERVF-YSISSD-DVGCWNAMI 218
            G   H + L+  I+   F G    +++ YAK G + AA+ VF  S S + D   WN+M+
Sbjct: 409 IGKQTHGYLLRNGIQ---FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMM 465

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G   +A  ++  ML + +  +  T  + L  C+     D G+Q+HG  IR++++
Sbjct: 466 SGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLD 525

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ +  ALIDMY KS  + +A  VF +  +K +++++T+  G+ ++        +FH+ 
Sbjct: 526 QNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRM 585

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
             SG +P+ VT   +L  C     +D GLQ+
Sbjct: 586 QKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 227/469 (48%), Gaps = 15/469 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           VHG +VKLG  + ND+++ ++ I MY++ G   +  +VFD   ERN   W  ++SA +QN
Sbjct: 208 VHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQN 267

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                G++++   +++     +E  + S +     +   E    +H F +K        V
Sbjct: 268 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 327

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++  Y++   +  + ++F ++   DV  WN MI  +   G   EAL +   M  + +
Sbjct: 328 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDL 387

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T    L   S + + DIG+Q HG ++R+ ++    + + LIDMY KS  ++ A  
Sbjct: 388 MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQN 446

Query: 303 VFER--MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           VFE+    ++D  +WN++  G+++N    Q   +  + +     PN VT + +L  C   
Sbjct: 447 VFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPS 506

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             +D G QL   ++         V ++LI M+ + G++  A +VF   + K+I T++ ++
Sbjct: 507 GYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMI 566

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAIIK 476
            GY  +      L  F  + +SG++ +  T   V+  C  +    E  Q+   +   +  
Sbjct: 567 LGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMR-TVYN 625

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLD-MASWGAMMSA 523
              S+  + C + +      G++D ++EF  G  E+ + M  WG++++A
Sbjct: 626 IQPSTEHFCCVADMLGRA--GRVDKAYEFVIGLGEKGNVMEIWGSLLAA 672



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 135/302 (44%), Gaps = 22/302 (7%)

Query: 383 NVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           +++ +L++  CR    G + +A  +FD +   +   WN ++ G   N    + L  + N+
Sbjct: 2   HISINLVHELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM 61

Query: 440 WESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
             S  +V  +  T+  V++ C  + N  +   +H   ++   +    + +SL+  Y    
Sbjct: 62  KSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCS 121

Query: 498 QLDNSFEFSNGAERLDM-------------ASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
                 +  +G  R D+              +W  +++  V      EAV  F  +++ G
Sbjct: 122 STTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG 181

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKG 602
            KP       +  + +++G ++    +H  ++KLG  +  ++YV S+ I  YA+ G ++ 
Sbjct: 182 IKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEF 241

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI-FDKMKLANLQPSQATFVSVMSAC 661
           A+  FD     N   V+NT+I A+  +    E +++ F  ++  +    + T +S +SA 
Sbjct: 242 AKKVFDNCLERN-TEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAA 300

Query: 662 SH 663
           SH
Sbjct: 301 SH 302


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 197/655 (30%), Positives = 327/655 (49%), Gaps = 40/655 (6%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAER 201
           + FA+   +K   ++  +    S+H  AL+  +    +P VG ++L  YA+ GD+ AA  
Sbjct: 62  DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121

Query: 202 VFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI-TMDKYTFINALQGCSL 258
           +F + +++  D   +N++I           AL+ +  ML EG   +  +T ++ L  CS 
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSH 181

Query: 259 VADFD---IGRQIHGLIIRS---EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-- 310
           +   D   +GR+ H   ++    +        NAL+ MY +   +D A  +F   A    
Sbjct: 182 LPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFS 241

Query: 311 ----DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
               DV++WNT+     +     +   + +  +  G RP+ VTF+  L  C +L  L LG
Sbjct: 242 PGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALG 301

Query: 367 LQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGY 423
            ++  + L    L   + V S+L+ M+     V  A  VFD V    + +  WN ++ GY
Sbjct: 302 REMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGY 361

Query: 424 CFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                D + L+ F  +  E+G   +  T   V+  C RSE       +HG ++K G +  
Sbjct: 362 AQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGN 421

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-- 540
            ++ ++L+  Y   G++D +       +  D+ SW  +++  V QGH  EA  +   +  
Sbjct: 422 RFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQL 481

Query: 541 ----------VEAGEK----PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
                      E GE     P+   L T+L  CAA+ A  R K IH + ++    +++ V
Sbjct: 482 PSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAV 541

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA- 645
            SA++D YAKCG +  +R  FD+     +VI +N LIMAY  HGL  EA+ +FD+M    
Sbjct: 542 GSALVDMYAKCGCLAASRAVFDR-LPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGG 600

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
              P++ TF++ ++ACSH GLVD+G  LF  M+  +G++P+PD + C+VD+L R G L++
Sbjct: 601 EATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDE 660

Query: 706 AKHVIEIM-PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           A  +I  M P +   + + SLL  CR+H N ELGE A+E+L  L P   + +VLL
Sbjct: 661 AYSIITSMEPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLL 715



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 213/497 (42%), Gaps = 33/497 (6%)

Query: 60  RVLGTQVHGHIVKLGFTND---IFLQNNLIAMYSKCGYFGWGLRVFDEMAER------NL 110
           R LG + H   +K GF ++    F  N L++MY++ G       +F   A        ++
Sbjct: 188 RRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDV 247

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+W  ++S  +Q G     +++  DM + G  P+     S +  C  +     G  +H  
Sbjct: 248 VTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAV 307

Query: 171 ALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYG 227
            LK   +  N FV  ++++ YA    VA+A RVF  +   S  +G WNAMI GYA  G  
Sbjct: 308 VLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMD 367

Query: 228 FEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
            EAL + S M  E G    + T    L  C+    F     +HG +++  +  +  + NA
Sbjct: 368 EEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNA 427

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-- 344
           L+DMY +   MD A ++F  +  +DV+SWNTL  G     +  +   L  +  L      
Sbjct: 428 LMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPS 487

Query: 345 --------------PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
                         PN++T   LL  C  L     G ++   A+      +  V S+L+ 
Sbjct: 488 SSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVD 547

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGC 449
           M+ +CG +  + +VFD +  +N+ TWN L+  Y  +    + +  F  +   G    N  
Sbjct: 548 MYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEV 607

Query: 450 TFFYVVETCCRSE-NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
           TF   +  C  S    + +   HG     G      + + ++      G+LD ++     
Sbjct: 608 TFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITS 667

Query: 509 AE--RLDMASWGAMMSA 523
            E     +++W +++ A
Sbjct: 668 MEPGEQQVSAWSSLLGA 684



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 139/282 (49%), Gaps = 20/282 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG++VK G   + F+QN L+ MY++ G      R+F  +  R++VSW  +++  +  G 
Sbjct: 409 MHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGH 468

Query: 126 FDMGLKMYVDMK----------------TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
                ++  +M+                 +  MPN   + +++  C ++ A   G  IH 
Sbjct: 469 AAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHG 528

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
           +A++  +E +  VG ++++ YAK G +AA+  VF  +   +V  WN +I  Y   G G E
Sbjct: 529 YAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDE 588

Query: 230 ALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNAL 287
           A+ +   M   G  T ++ TFI AL  CS     D G ++ HG+     V+ +  +   +
Sbjct: 589 AVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACV 648

Query: 288 IDMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSENKN 327
           +D+  ++  +D A+ +   M   ++ V +W++L G    ++N
Sbjct: 649 VDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRN 690



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 4/168 (2%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L +   G ++HG+ V+    +DI + + L+ MY+KCG       VFD +  RN+++W ++
Sbjct: 517 LAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVL 576

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGASEFGYSI-HCFALKI 174
           + A   +G  D  + ++ +M   G   PNE    + +  C   G  + G  + H      
Sbjct: 577 IMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDH 636

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD--VGCWNAMIGG 220
            ++  P +   V++   + G +  A  +  S+   +  V  W++++G 
Sbjct: 637 GVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGA 684


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 301/587 (51%), Gaps = 9/587 (1%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+  ++L  Y +LG    A R+   +   +   +N +I  Y+  G    +L  ++     
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +D++++  AL  CS       GR +H L I   +   + + N+L+ MY K   M  A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF+   ++D +SWN+L  G+       +   +F      G   N      +++ C   
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 361 LD--LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            D  +D+   +    +  G   +  + S++I M+ + GA+  A ++F +V   N+  +N 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 419 LLSGYCFNCC------DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +++G+C           ++ L  +  +   G++    TF  V+  C  +   +   QIHG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +IK  F    +I S+LI  Y N G +++ F     + + D+ +W AM+S  V    + +
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK 403

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+++FH  + AG KPD + + +++N+CA++   +  + I  F  K GF+    + ++ + 
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YA+ GD+  A   F Q   S+DV+ ++ +I  +A HG   +A+  FD+M  A + P++ 
Sbjct: 464 MYARSGDVDAATRRF-QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+ V++ACSH GLVD+G   +++M+  YG+ P+     C+VD+L R G L DA+  I  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             F   P ++RSLL+ CRIH + E G+  + +++ L P + A++V+L
Sbjct: 583 GIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVIL 629



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 233/482 (48%), Gaps = 32/482 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   +  G ++ +F+ N+L++MYSKCG  G   RVFD   ER+ VSW  +VS  ++
Sbjct: 128 GRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--ASEFGYSIHCFALKIRIEKNP 180
            G  +  ++++  M+  G   N FA+GSV+K C   G    +   ++H   +K  ++ + 
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG------YGFEALNVV 234
           F+  ++++ YAK G +  A  +F S+   +V  +N MI G+             EAL + 
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           S +   G+   ++TF + L+ C+L    + G+QIHG +I+   +    I +ALID+Y  S
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             M+  F+ F      D+++W  +  G  +N+   +  SLFH+ + +G +P+  T S ++
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L     G Q+QC A   GF     + +S ++M+ R G V+ A   F  +   ++ 
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W+ ++S +  + C  D L  F  + ++ V  N  TF  V+  C            HG +
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACS-----------HGGL 536

Query: 475 IKT------------GFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMM 521
           +              G S     C+ ++      G+L ++  F SNG    D   W +++
Sbjct: 537 VDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLL 596

Query: 522 SA 523
           ++
Sbjct: 597 AS 598



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 138/587 (23%), Positives = 261/587 (44%), Gaps = 12/587 (2%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +FL+N L+A Y + G      R+ DEM  RN VS+ L++ A  + G   + L+     + 
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G   + F+  + +  C   G    G ++H  A+   +    FV  S+++ Y+K G++  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RVF      D   WN+++ GY   G   E + V + M   G+ ++ +   + ++ CS 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 259 VAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
             D   DI   +HG +I++ ++  + +V+A+IDMY K   +  A  +F  + + +V+ +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 317 TLFGGFSENKN------PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           T+  GF   +         +  +L+ +    G +P   TFS +LR C     L+ G Q+ 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +   F +++ + S+LI ++   G +E     F +    +I TW  ++SG   N    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             L  F     +G++ +  T   V+  C      +   QI     K+GF     + +S +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G +D +       E  D+ SW A++S     G   +A+  F  +V+A   P+E 
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
               +L +C+  G        +  + K  G +  +   + V+D   + G +  A      
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFV 655
                D +++ +L+ +   H  +     + +  ++  L+P S A++V
Sbjct: 583 GIFHADPVIWRSLLASCRIHRDLERGQLVAN--RIMELEPTSSASYV 627



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 118/308 (38%), Gaps = 43/308 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   ++  ++   +L     G Q+     K GF     + N+ + MY++ G      
Sbjct: 416 LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAAT 475

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F EM   ++VSW+ ++S   Q+G     L  + +M     +PNE     V+  C   G
Sbjct: 476 RRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G                      L +Y  +          Y +S     C   ++ 
Sbjct: 536 LVDEG----------------------LRYYETMNKD-------YGLSPTIKHC-TCVVD 565

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
                G   +A   +S+ +F     D   + + L  C +  D + G+ +   I+  E   
Sbjct: 566 LLGRAGRLADAEAFISNGIFHA---DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTS 622

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISWNTLFGG----FSENKNPGQ 330
           S S V  L +MY+ +  +  A K  + M  + V     +SW  L  G     + +K+  +
Sbjct: 623 SASYV-ILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPE 681

Query: 331 TASLFHKF 338
           +++++ K 
Sbjct: 682 SSAIYTKL 689



 Score = 40.8 bits (94), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           +++ + ++ AY + G    AR   D+    N  + +N LI AY+  GL   ++E   + +
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRN-AVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            A +   + ++ + ++ACS  G +  G     ++    G+         LV M S+ G +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAG-RAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            +A+ V ++   +     + SL+SG    G +E
Sbjct: 161 GEARRVFDVAE-ERDDVSWNSLVSGYVRAGARE 192


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 197/716 (27%), Positives = 357/716 (49%), Gaps = 10/716 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-- 107
           L+L   ++S +   QVH   +  GF    + L  +LI  Y+K  + G    +F++  +  
Sbjct: 61  LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC 120

Query: 108 RNLVSW-TLIVSAAIQ-NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           R    W TLI + +I  NG FD G + Y  M   G   ++     V+K+C        G 
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFD-GFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            +H    K+  + + +VG ++L  Y   G +  A R+F  +   DV  WN +IG  +  G
Sbjct: 180 EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNG 239

Query: 226 YGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
              EA N    M+    I  +  + I+ L   + + D ++ R+IH   ++  ++  ++  
Sbjct: 240 DYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTC 299

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NAL+D Y K   +   ++VF    +K+ +SWN++  G +         + F   I +G++
Sbjct: 300 NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQ 359

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT S +L    +L     G ++   ++  G   +  + +SLI M+ + G    A ++
Sbjct: 360 PNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTI 419

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F N+  +NI +WN +++ Y  N    + ++    + E+G   N  TF  V+  C R    
Sbjct: 420 FHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFL 479

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               +IH   ++ G +S  ++ +SLI  Y   G L ++    N   R D  S+  ++   
Sbjct: 480 GPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGY 538

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                  +++ +F  +   G+KPD      ++++CA + A ++ K +H   ++    + +
Sbjct: 539 SETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHL 598

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V+++++D Y KCG I  A   F+Q     DV  +NT+I+ Y   G +  A+ +F+ M+ 
Sbjct: 599 FVSNSLLDFYTKCGRIDIACRLFNQIL-FKDVASWNTMILGYGMIGELETAISMFEAMRD 657

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             +Q    ++++V+SACSH GLV++G   F  M +Q  ++P+   Y C+VD+L R G++E
Sbjct: 658 DTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVE 716

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A  +I+ +P  P   ++ +LL  CRI+GN ELG  A+E L  L P++   ++LLS
Sbjct: 717 EAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLS 772



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 291/629 (46%), Gaps = 6/629 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VHG + KLGF  D+++ N L+ +Y  CG+     R+FDEM ER++VSW  I+     
Sbjct: 178 GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSV 237

Query: 123 NGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG++      Y  M     + PN  +V S++ +  ++   E    IHC+++K+ ++    
Sbjct: 238 NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVT 297

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++ Y K G V A  +VF      +   WN++I G A  G  ++ALN    M+  G
Sbjct: 298 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 357

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              +  T  + L     +  F  G++IHG  +R   E  I I N+LIDMY KS     A 
Sbjct: 358 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 417

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +  ++++SWN +   ++ N+ P +      +   +G  PN VTF+ +L  C +L 
Sbjct: 418 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 477

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++  + +  G   +  V++SLI M+ +CG +  A +VF N S K+  ++N L+ 
Sbjct: 478 FLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILII 536

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY         L  F  +   G + +  +F  V+  C      +   ++HG  ++    S
Sbjct: 537 GYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYS 596

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SL+  Y   G++D +    N     D+ASW  M+      G    A+++F ++ 
Sbjct: 597 HLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR 656

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +   + D      +L++C+  G  +R       ++           + ++D   + G ++
Sbjct: 657 DDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVE 716

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A     Q   + D  ++  L+ A   +G V       +   L  L+P    +  ++S  
Sbjct: 717 EAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAE--HLFELKPQHCGYYILLSNI 774

Query: 662 -SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +  G  D+   + + M S+ G + +P C
Sbjct: 775 YAETGRWDEANKIRELMKSR-GAKKNPGC 802



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 41/544 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ + + +   L +S  L+   +  ++H + VK+G  + +   N L+  Y KCG    
Sbjct: 255 SVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKA 314

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             +VF+E  E+N VSW  I++     G     L  +  M   G  PN   + S++ V V 
Sbjct: 315 LWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVE 374

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +   + G  IH F++++  E + F+  S+++ YAK G    A  +F+++   ++  WNAM
Sbjct: 375 LECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAM 434

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  YA      EA+  V  M   G   +  TF N L  C+ +     G++IH + +R  +
Sbjct: 435 IANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL 494

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              + + N+LIDMY K   +  A  VF   + KD +S+N L  G+SE  +  Q+ +LF +
Sbjct: 495 TSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSE 553

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             L G +P+ V+F  ++  C  L  L  G ++  +AL         V++SL+  + +CG 
Sbjct: 554 MRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGR 613

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +++A  +F+ + +K++ +WN ++ GY         +  F  + +  V+ +  ++  V+  
Sbjct: 614 IDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSA 673

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS- 516
           C            HG +++ G+    Y    L                   A+RL+    
Sbjct: 674 CS-----------HGGLVERGWQ---YFSEML-------------------AQRLEPTEM 700

Query: 517 -WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ--RTKSIHP 573
            +  M+  L   G   EA  +   L  A   PD  I G +L +C   G  +  R  + H 
Sbjct: 701 HYTCMVDLLGRAGFVEEAAKLIQQLPIA---PDANIWGALLGACRIYGNVELGRRAAEHL 757

Query: 574 FVIK 577
           F +K
Sbjct: 758 FELK 761



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/478 (23%), Positives = 223/478 (46%), Gaps = 27/478 (5%)

Query: 247 YTFINALQGCSLVADFDIGRQIHGL-IIRSEVECSISIVNALIDMYIK-------SSGMD 298
           Y  IN L  CS V      +Q+H L I+   +  S+S+  +LI  Y K        S  +
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 299 YAFK------VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
             F+      ++  +     I+WN  F GF            +++ +  G + +  TF  
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFET----------YNRMVRRGVQLDDHTFPF 164

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+ C    D+  G+++  +    GF  +  V ++L+ ++  CG +  A  +FD +  ++
Sbjct: 165 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERD 224

Query: 413 ITTWNELLSGYCFNCCDADVLK-TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           + +WN ++     N    +     F  I  S ++ N  +   ++      E+++M  +IH
Sbjct: 225 VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 284

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
              +K G  S    C++L+ +Y   G +   ++  N     +  SW ++++ L  +G   
Sbjct: 285 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCW 344

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+  F  +++AG +P+   + +IL     +  ++  K IH F +++G  T++++A+++I
Sbjct: 345 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 404

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D YAK G    A   F  + +  +++ +N +I  YA + L  EA+    +M+     P+ 
Sbjct: 405 DMYAKSGHSTEASTIF-HNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNA 463

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
            TF +V+ AC+  G +  G  +  +M  + G+         L+DM ++ G L  A++V
Sbjct: 464 VTFTNVLPACARLGFLGPGKEI-HAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 520



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 3/389 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+  + + + ++  L +   L+    G ++HG  +++G   DIF+ N+LI MY+K G+  
Sbjct: 355 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHST 414

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F  +  RN+VSW  +++    N      ++  + M+  G  PN     +V+  C 
Sbjct: 415 EASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACA 474

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G    G  IH   ++I +  + FV  S+++ YAK G + +A  VF +   D+V  +N 
Sbjct: 475 RLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVS-YNI 533

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I GY+      ++LN+ S M   G   D  +F+  +  C+ +A    G+++HG+ +R+ 
Sbjct: 534 LIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNH 593

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +   + + N+L+D Y K   +D A ++F ++  KDV SWNT+  G+          S+F 
Sbjct: 594 LYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFE 653

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
                  + + V++  +L  C     ++ G Q     L       E   + ++ +  R G
Sbjct: 654 AMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAG 713

Query: 397 AVEMAHSVFDNVSY-KNITTWNELLSGYC 424
            VE A  +   +    +   W  LL G C
Sbjct: 714 FVEEAAKLIQQLPIAPDANIWGALL-GAC 741



 Score = 44.3 bits (103), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFD 608
           YI   +L  C+ + +  +TK +H   I  GF    V + +++I  YAK          F+
Sbjct: 55  YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114

Query: 609 QSF-NSNDVIVYNTLIMAY--AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH-- 663
           Q+F N     ++NTLI A+  A +G   +  E +++M    +Q    TF  V+  CS   
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTF-DGFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173

Query: 664 ---KGLVDKGCLLFKSMDSQYGMQPSPDCY-GCLVDMLSRN-GYLEDAKHVIEIMP 714
              KG+   G +     D+        D Y G  + ML  N G+L DA+ + + MP
Sbjct: 174 DICKGMEVHGVVFKLGFDT--------DVYVGNTLLMLYGNCGFLNDARRLFDEMP 221


>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
 gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
          Length = 691

 Score =  288 bits (736), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 172/650 (26%), Positives = 312/650 (48%), Gaps = 41/650 (6%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           + ++ C  + A + G S H   +K     N ++ C++++ YA    +  A ++F  +   
Sbjct: 8   AAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVK 67

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQI 268
           ++  W  M+  Y   G   EA+ + + ML  +    + + +   L+ C LV + ++GR I
Sbjct: 68  NIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLI 127

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER---------------------- 306
           H    R  ++  I ++NAL+DMY+K   +  A KVF+R                      
Sbjct: 128 HKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGL 187

Query: 307 ----------MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
                     M D++V+SWNT+  G +EN    +      K    G + +  TF   L+ 
Sbjct: 188 VEEAVNLFNQMPDRNVVSWNTIIAGLAEN-GSSRALQFVCKMHREGIKLDKFTFPCALKT 246

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS------Y 410
           C     L  G Q+ C  L  G        S+L+ M+  C  ++ A  +FD  S       
Sbjct: 247 CSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSIC 306

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            ++  WN +LSGY  +  +   +     I  SG  V+  T    ++ C    N ++  Q+
Sbjct: 307 DSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQV 366

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  I+ +G      + S L+  Y   G + ++F+  +   + D+ +W  ++        N
Sbjct: 367 HALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELN 426

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             A+++F  +V  G + D+YI+  +L  C+++ +    K +H F IK G+ TE    +A+
Sbjct: 427 SLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITAL 486

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y+KCG+++   + F       DV+ +  +I+  A +G  +EA+EIF +M  + L+P+
Sbjct: 487 IDMYSKCGEVEDGLVLFG-CVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPN 545

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + T++ V++AC H GLV +   +F +M   + ++P  + Y C+VD+L + GY ++ + +I
Sbjct: 546 EVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLI 605

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             MPF+P  T++ S+L  C  H N  L    +E LL   P + + +V+LS
Sbjct: 606 AEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLS 655



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 167/656 (25%), Positives = 302/656 (46%), Gaps = 50/656 (7%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +K+   G   H H++K G+++++++  NL++MY+   +     ++FDEM  +N+V+WT +
Sbjct: 16  VKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNIVTWTTM 75

Query: 117 VSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           VSA   NG+    +K+Y  M  +   +PN F    V+K C  +G  E G  IH    +  
Sbjct: 76  VSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRFSREN 135

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGYAHCGYGFEALNV- 233
           ++ +  +  ++L+ Y K G ++ A +VF  I    +   WN MI GY   G   EA+N+ 
Sbjct: 136 LDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEAVNLF 195

Query: 234 -----------------------------VSSMLFEGITMDKYTFINALQGCSLVADFDI 264
                                        V  M  EGI +DK+TF  AL+ CS       
Sbjct: 196 NQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSYAGFLVA 255

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD------KDVISWNTL 318
           G+QIH  +++S +E S   V+AL+DMY   +G+D A ++F++ +         ++ WN++
Sbjct: 256 GKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSLVLWNSM 315

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G+  ++      ++  +   SG+  +  T S  L+ C  LL++ LG+Q+  L +  G 
Sbjct: 316 LSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHALIVTSGH 375

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V S L+ ++ + G ++ A  +F  +  K+I  W+ LL G      ++  L  F +
Sbjct: 376 ELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLALSLFRD 435

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GVEV+      V++ C    +     Q+H   IK G+ +     ++LI  Y   G+
Sbjct: 436 MVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTITALIDMYSKCGE 495

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +++           D+  W  ++      G  +EA+ IF  +V++G KP+E     +L +
Sbjct: 496 VEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVTYLGVLTA 555

Query: 559 CAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           C   G     ++I   +    +L    E Y    ++D   + G  K       +     D
Sbjct: 556 CRHAGLVVEAQTIFGTMKCDHRLEPQLEHYY--CMVDLLCQAGYFKEVEKLIAEMPFKPD 613

Query: 616 VIVYNTLIMAYAHH---GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
             ++++++ A   H   GLVS   E      LAN     + +V + +A    G+ D
Sbjct: 614 KTIWSSMLGACGTHRNTGLVSTIAENL----LANCPNDPSIYVMLSNAYGTLGMWD 665



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 125/508 (24%), Positives = 230/508 (45%), Gaps = 56/508 (11%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           MD    + A++ C  V     G+  H  +I++    ++ I   L+ MY   + +  A+K+
Sbjct: 1   MDLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKL 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLD 362
           F+ M  K++++W T+   ++ N  P +   L+ + + S S  PN   +S++L+ CG + +
Sbjct: 61  FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGE 120

Query: 363 LDLGLQLQCLALHCGF----LDEENV-TSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTW 416
           ++LG       +H  F    LD + V  ++L+ M+ +CG +  A  VFD +  + N T+W
Sbjct: 121 IELG-----RLIHKRFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSW 175

Query: 417 NELLSGY-----------CFN-CCDADV------------------LKTFCNIWESGVEV 446
           N ++SGY            FN   D +V                  L+  C +   G+++
Sbjct: 176 NTMISGYFKEGLVEEAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKL 235

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF--- 503
           +  TF   ++TC  +       QIH  ++K+G  S  +  S+L+  Y N   LD++    
Sbjct: 236 DKFTFPCALKTCSYAGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLF 295

Query: 504 -EFSNGAERL--DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            ++S G   +   +  W +M+S  V    N  AV +   +  +G   D Y L + L  C 
Sbjct: 296 DQYSGGTGSICDSLVLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCI 355

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +   +    +H  ++  G   +  V S ++D YAK G++K A   F +     D++ ++
Sbjct: 356 NLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHR-LPKKDIVAWS 414

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS- 679
            L+M  A   L S A+ +F  M    ++  Q    +V+  CS    +  G    K + + 
Sbjct: 415 GLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTG----KQVHAF 470

Query: 680 --QYGMQPSPDCYGCLVDMLSRNGYLED 705
             + G +        L+DM S+ G +ED
Sbjct: 471 CIKRGYETEQVTITALIDMYSKCGEVED 498



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 146/314 (46%), Gaps = 4/314 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+ +L +  NL +  LG QVH  IV  G   D  + + L+ +Y+K G      ++F
Sbjct: 343 DSYTLSSALKVCINLLNVRLGIQVHALIVTSGHELDYVVGSILVDLYAKLGNMKDAFKLF 402

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + ++++V+W+ ++    +     + L ++ DM T G   +++ V +V+KVC S+ +  
Sbjct: 403 HRLPKKDIVAWSGLLMGCAKMELNSLALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIG 462

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H F +K   E       ++++ Y+K G+V     +F  ++  DV CW  +I G A
Sbjct: 463 TGKQVHAFCIKRGYETEQVTITALIDMYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCA 522

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSI 281
             G   EAL +   M+  G+  ++ T++  L  C         + I G +     +E  +
Sbjct: 523 QNGRANEALEIFRQMVQSGLKPNEVTYLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQL 582

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFIL 340
                ++D+  ++       K+   M  K D   W+++ G    ++N G  +++    + 
Sbjct: 583 EHYYCMVDLLCQAGYFKEVEKLIAEMPFKPDKTIWSSMLGACGTHRNTGLVSTIAENLL- 641

Query: 341 SGSRPNHVTFSILL 354
             + PN  +  ++L
Sbjct: 642 -ANCPNDPSIYVML 654



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 18/231 (7%)

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           +  C  + A ++ KS H  +IK G++  VY+A  ++  YA    +  A   FD+     +
Sbjct: 10  IRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDE-MPVKN 68

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ-PSQATFVSVMSACSHKGLVDKGCLLF 674
           ++ + T++ AY  +G   EA++++ +M  +  + P+   +  V+ AC   G ++ G L+ 
Sbjct: 69  IVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIH 128

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG- 733
           K   S+  +         L+DM  + G L DA+ V + +  + + T + +++SG    G 
Sbjct: 129 KRF-SRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGL 187

Query: 734 ------------NKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLD 772
                       ++ +  W +  ++  L +N ++  L    K  REG  LD
Sbjct: 188 VEEAVNLFNQMPDRNVVSWNT--IIAGLAENGSSRALQFVCKMHREGIKLD 236


>gi|302785287|ref|XP_002974415.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
 gi|300158013|gb|EFJ24637.1| hypothetical protein SELMODRAFT_462 [Selaginella moellendorffii]
          Length = 659

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/663 (26%), Positives = 317/663 (47%), Gaps = 23/663 (3%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           +T ++ A  ++ +      +   M+ +G  PN   +  ++  C ++ +   G  IH + +
Sbjct: 4   YTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQWII 63

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
            + + ++  +G ++L  +A+ G +  A+  F +I+  D+  WNA+I   +H     EAL+
Sbjct: 64  DLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHEALD 123

Query: 233 VVSSMLFEGITMDKYTFINAL---QGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALI 288
           +   M  +GI  +  T +  L   Q  S  A     R +H L + S + E S+++ N+++
Sbjct: 124 LFRRMQLDGIHPNAITLVAVLSIFQESSTDA-----RAVHSLAMESAMDESSVAVGNSIV 178

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY +   +D A   F R+  K+V+SWN +    S+       A +FH  +L G + +  
Sbjct: 179 NMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLHPLA-MFHAMMLEGIKADAT 237

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCG----FLDEENVTSSLIYMFCRCGAVEMAHSV 404
           TF  L         L  G  L   A   G     + +  + +SL+ MF +CG+V  A  +
Sbjct: 238 TFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARDI 297

Query: 405 FD---NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           F    +   +N   WN +++    N   +D L  F  +   GV  +  TF   ++ C   
Sbjct: 298 FHENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACTAL 357

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E+      +HG I ++   +   + ++L+  Y    +LD +          D+ +W  ++
Sbjct: 358 EDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIPEPDLVAWNVLI 417

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A V    +  A+ IF   +E   KPD     T L +C    A    + +H  + + G +
Sbjct: 418 AAHVDNADSSTALEIFFHRMEL--KPDRITFITTLAACVTASALPLGRRLHEQIRQRGLH 475

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V VASA++D Y+KCG ++ A   F       +   +N LI  +A HG    A  +  +
Sbjct: 476 SDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVRE 535

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+L  ++P   T+V ++ ACSH GL++ GC  F ++     +    + YGC+VD+L R G
Sbjct: 536 MQLEGVEPDSLTYVGLLLACSHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAG 595

Query: 702 YLEDAKHVI----EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            L +A+  +      MP   S  ++ SLLS C +HG+ EL   A+ ++L L P++ AA V
Sbjct: 596 KLAEAEEFLLGLRRAMPVAASAAMWTSLLSACGVHGDMELARRAARRVLDLEPRHPAAFV 655

Query: 758 LLS 760
           +LS
Sbjct: 656 VLS 658



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/529 (22%), Positives = 233/529 (44%), Gaps = 16/529 (3%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I L + LS    L S  LG ++H  I+ LG   D  L   L+  +++ G        F  
Sbjct: 37  ITLVEILSACTALHSIHLGDRIHQWIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTA 96

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +A ++L++W  I++A   +      L ++  M+ +G  PN   + +V+ +     +S   
Sbjct: 97  IARKDLIAWNAIITATSHSNRSHEALDLFRRMQLDGIHPNAITLVAVLSIF--QESSTDA 154

Query: 165 YSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
            ++H  A++  ++++   VG S++N YA+  D+  A   F  I S +V  WN MI  ++ 
Sbjct: 155 RAVHSLAMESAMDESSVAVGNSIVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQ 214

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-----RSEVE 278
                  L +  +M+ EGI  D  TF+N   G +  +    G  +H         R+ + 
Sbjct: 215 LDR-LHPLAMFHAMMLEGIKADATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIY 273

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGGFSENKNPGQTASLF 335
            ++ +  +L+ M+ K   + +A  +F       +++ + WN +     +N +      LF
Sbjct: 274 DAV-LATSLVTMFAKCGSVAHARDIFHENFHCHERNPVVWNAIIAALVQNHDFSDALLLF 332

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
               L G   + +TF   +  C  L D   G  L  +        +  V ++L+  + + 
Sbjct: 333 RTMQLQGVPSDAITFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKS 392

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
             ++ A + F  +   ++  WN L++ +  N   +  L+ F +  E  ++ +  TF   +
Sbjct: 393 RRLDAATAAFQRIPEPDLVAWNVLIAAHVDNADSSTALEIFFHRME--LKPDRITFITTL 450

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDM 514
             C  +    +  ++H  I + G  S   + S+L+  Y   G L+ +++ FS  A R + 
Sbjct: 451 AACVTASALPLGRRLHEQIRQRGLHSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNS 510

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           A+W A+++     G +  A ++   +   G +PD      +L +C+  G
Sbjct: 511 ATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACSHAG 559



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 132/544 (24%), Positives = 244/544 (44%), Gaps = 41/544 (7%)

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + A+IG YA       A  ++  M  +GI  ++ T +  L  C+ +    +G +IH 
Sbjct: 1   VAMYTALIGAYARSNDPSAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQ 60

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            II   +     +  AL+  + +S  +D A   F  +A KD+I+WN +    S +    +
Sbjct: 61  WIIDLGLHRDSVLGTALLTTFARSGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHE 120

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSL 388
              LF +  L G  PN +T   +L    +    D    +  LA+    +DE +V   +S+
Sbjct: 121 ALDLFRRMQLDGIHPNAITLVAVL-SIFQESSTD-ARAVHSLAMESA-MDESSVAVGNSI 177

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ RC  ++ A   F  +  KN+ +WN ++S +         L  F  +   G++ + 
Sbjct: 178 VNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHS-QLDRLHPLAMFHAMMLEGIKADA 236

Query: 449 CTFFYVV------------ETCCRSENQQMVGQ--IHGAIIKTG----FSSCGYICSSLI 490
            TF  +             E   R   +   G+  I+ A++ T     F+ CG +  +  
Sbjct: 237 TTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARD 296

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             + NF          +  ER +   W A+++ALV      +A+ +F ++   G   D  
Sbjct: 297 IFHENF----------HCHER-NPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAI 345

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              + +++C A+  +   +++H  + +    T+  VA+A+++ Y+K   +  A  AF Q 
Sbjct: 346 TFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAF-QR 404

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEI-FDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
               D++ +N LI A+  +   S A+EI F +M+   L+P + TF++ ++AC     +  
Sbjct: 405 IPEPDLVAWNVLIAAHVDNADSSTALEIFFHRME---LKPDRITFITTLAACVTASALPL 461

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  L + +  Q G+         LVDM S+ G LE+A  V   M  + +   + +L++G 
Sbjct: 462 GRRLHEQI-RQRGLHSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGH 520

Query: 730 RIHG 733
             HG
Sbjct: 521 AQHG 524



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 3/216 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I    ++     L+    G  +HG I +     D  +   L+  YSK          F
Sbjct: 343 DAITFVSTIDACTALEDFSTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAF 402

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + E +LV+W ++++A + N +    L+++         P+     + +  CV+  A  
Sbjct: 403 QRIPEPDLVAWNVLIAAHVDNADSSTALEIF--FHRMELKPDRITFITTLAACVTASALP 460

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGY 221
            G  +H    +  +  +  V  ++++ Y+K G +  A +VF +++   +   WNA+I G+
Sbjct: 461 LGRRLHEQIRQRGLHSDVIVASALVDMYSKCGSLEEAYKVFSTMAGRRNSATWNALIAGH 520

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           A  G+   A ++V  M  EG+  D  T++  L  CS
Sbjct: 521 AQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACS 556



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 12/168 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D I    +L+      +  LG ++H  I + G  +D+ + + L+ MYSKCG      
Sbjct: 439 LKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLHSDVIVASALVDMYSKCGSLEEAY 498

Query: 100 RVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +VF  MA  RN  +W  +++   Q+G       +  +M+  G  P+      ++  C   
Sbjct: 499 KVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACSHA 558

Query: 159 GASEFGYSIHCFALKIRIE------KNPFVGCSVLNFYAKLGDVAAAE 200
           G  E G    C      +E      K    GC V++   + G +A AE
Sbjct: 559 GLLEDG----CKFFAALVEDKRLAVKEEHYGC-VVDLLGRAGKLAEAE 601


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 266/518 (51%), Gaps = 10/518 (1%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF + L+ C+   D   GR +H  +    ++       AL +MY K      A +VF+RM
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLG 366
             +D ++WN L  G++ N        +  +     G RP+ +T   +L  C     L   
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            +    A+  G  +  NV ++++  +C+CG +  A  VFD +  KN  +WN ++ GY  N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETC----CRSENQQMVGQIHGAIIKTGFSSC 482
               + L  F  + E GV+V   +    ++ C    C  E  +    +H  +++ G  S 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMR----VHELLVRIGLDSN 296

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y    ++D +    +  +R    SW AM+      G + +AV +F  +  
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KPD + L +++ + A I    + + IH + I+L  + +VYV +A+ID YAKCG +  
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR+ F+ S     VI +N +I  Y  HG    A+E+F++MK   + P++ TF+SV+SACS
Sbjct: 417 ARILFN-SARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLVD+G   F SM   YG++P  + YG +VD+L R G L++A   I+ MP  P  +VY
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++L  C++H N EL E +++K+  L P+    HVLL+
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLA 573



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 13/403 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +   G  ++      L  MY+KC       RVFD M  R+ V+W  +V+   +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 123 NGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG   M ++M V M+   G  P+   + SV+  C +  A       H FA++  +E+   
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y K GD+ AA  VF  + + +   WNAMI GYA  G   EAL + + M+ EG
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +   + + ALQ C  +   D G ++H L++R  ++ ++S++NALI MY K   +D A 
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF+ +  +  +SWN +  G ++N        LF +  L   +P+  T   L+     L 
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT---LVSVIPALA 374

Query: 362 DLDLGLQLQ-----CLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           D+   LQ +      + LH   LD++  V ++LI M+ +CG V +A  +F++   +++ T
Sbjct: 375 DISDPLQARWIHGYSIRLH---LDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           WN ++ GY  +      ++ F  +   G+  N  TF  V+  C
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSAC 474



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 249/574 (43%), Gaps = 6/574 (1%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           + A+    +    L  +V M + G  P      S++K+C + G    G ++H       I
Sbjct: 31  LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           +       ++ N YAK    A A RVF  +   D   WNA++ GYA  G    A+ +V  
Sbjct: 91  DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150

Query: 237 MLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           M  E G   D  T ++ L  C+        R+ H   IRS +E  +++  A++D Y K  
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A  VF+ M  K+ +SWN +  G+++N +  +  +LF++ +  G     V+    L+
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            CG+L  LD G+++  L +  G     +V ++LI M+ +C  V++A  VFD +  +   +
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ G   N C  D ++ F  +    V+ +  T   V+       +      IHG  I
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSI 390

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +       Y+ ++LI  Y   G+++ +    N A    + +W AM+      G    AV 
Sbjct: 391 RLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVE 450

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAY 594
           +F  +   G  P+E    ++L++C+  G     +     + +  G    +     ++D  
Sbjct: 451 LFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLL 510

Query: 595 AKCGDIKGARMAFDQSFNSND-VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
            + G +  A  AF Q    +  + VY  ++ A   H  V  A E     K+  L P +  
Sbjct: 511 GRAGKLDEA-WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEE--SAQKIFELGPQEGV 567

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           +  +++       + K     ++   + G+Q +P
Sbjct: 568 YHVLLANIYANASMWKDVARVRTAMEKNGLQKTP 601



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 16/341 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I L   L    N ++     + H   ++ G    + +   ++  Y KCG       
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD M  +N VSW  ++    QNG+    L ++  M   G    + +V + ++ C  +G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  +H   ++I ++ N  V  +++  Y+K   V  A  VF  +       WNAMI G
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   +A+ + + M  E +  D +T ++ +   + ++D    R IHG  IR  ++  
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + ++ ALIDMY K   ++ A  +F    ++ VI+WN +  G+  +        LF +   
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
            G  PN  TF  +L  C                 H G +DE
Sbjct: 458 IGIVPNETTFLSVLSACS----------------HAGLVDE 482



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           +S+ L++R     +HG+ ++L    D+++   LI MY+KCG       +F+   ER++++
Sbjct: 376 ISDPLQAR----WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           W  ++     +G     ++++ +MK+ G +PNE    SV+  C   G  + G
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 163/587 (27%), Positives = 300/587 (51%), Gaps = 9/587 (1%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+  ++L  Y +LG    A R+   +   +   +N +I  Y+  G    +L  ++     
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +D++++  AL  CS       GR +H L I   +   + + N+L+ MY K   M  A
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF+   ++D +SWN+L  G+       +   +F      G   N      +++ C   
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 361 LD--LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            D  +D+   +    +  G   +  + S++I M+ + GA+  A ++F +V   N+  +N 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283

Query: 419 LLSGYCFNCC------DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +++G+C           ++ L  +  +   G++    TF  V+  C  +   +   QIHG
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +IK  F    +I S+LI  Y N G +++ F     + + D+ +W AM+S  V    + +
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK 403

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+++FH  + AG KPD + + +++N+CA++   +  + I  F  K GF+    + ++ + 
Sbjct: 404 ALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVH 463

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YA+ GD+  A   F Q   S+DV+ ++ +I  +A HG   +A+  FD+M  A + P++ 
Sbjct: 464 MYARSGDVDAATRRF-QEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+ V++ACSH GLVD+G   +++M   YG+ P+     C+VD+L R G L DA+  I  
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             F   P ++RSLL+ CRIH + E G+  + +++ L P + A++V+L
Sbjct: 583 SIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVIL 629



 Score =  207 bits (526), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 212/425 (49%), Gaps = 19/425 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   +  G ++ +F+ N+L++MYSKCG  G   RVFD   ER+ VSW  +VS  ++
Sbjct: 128 GRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVR 187

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--ASEFGYSIHCFALKIRIEKNP 180
            G  +  ++++  M+  G   N FA+GSV+K C   G    +   ++H   +K  ++ + 
Sbjct: 188 AGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDV 247

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG------YGFEALNVV 234
           F+  ++++ YAK G +  A  +F S+   +V  +N MI G+             EAL + 
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLY 307

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           S +   G+   ++TF + L+ C+L    + G+QIHG +I+   +    I +ALID+Y  S
Sbjct: 308 SEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNS 367

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             M+  F+ F      D+++W  +  G  +N+   +  SLFH+ + +G +P+  T S ++
Sbjct: 368 GCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVM 427

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L     G Q+QC A   GF     + +S ++M+ R G V+ A   F  +   ++ 
Sbjct: 428 NACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVV 487

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W+ ++S +  + C  D L  F  + ++ V  N  TF  V+  C            HG +
Sbjct: 488 SWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACS-----------HGGL 536

Query: 475 IKTGF 479
           +  G 
Sbjct: 537 VDEGL 541



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 139/587 (23%), Positives = 262/587 (44%), Gaps = 12/587 (2%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +FL+N L+A Y + G      R+ DEM  RN VS+ L++ A  + G   + L+     + 
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARR 102

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G   + F+  + +  C   G    G ++H  A+   +    FV  S+++ Y+K G++  
Sbjct: 103 AGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGE 162

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RVF      D   WN+++ GY   G   E + V + M   G+ ++ +   + ++ CS 
Sbjct: 163 ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSG 222

Query: 259 VAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
             D   DI   +HG +I++ ++  + +V+A+IDMY K   +  A  +F  + + +V+ +N
Sbjct: 223 RGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFN 282

Query: 317 TLFGGFSENKN------PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           T+  GF   +         +  +L+ +    G +P   TFS +LR C     L+ G Q+ 
Sbjct: 283 TMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIH 342

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +   F +++ + S+LI ++   G +E     F +    +I TW  ++SG   N    
Sbjct: 343 GQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHE 402

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             L  F     +G++ +  T   V+  C      +   QI     K+GF     + +S +
Sbjct: 403 KALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCV 462

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G +D +       E  D+ SW A++S     G   +A+  F  +V+A   P+E 
Sbjct: 463 HMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEI 522

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
               +L +C+  G        +  + K  G +  +   + V+D   + G +  A      
Sbjct: 523 TFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISN 582

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFV 655
           S    D +++ +L+ +   H  +     + +  ++  L+P S A++V
Sbjct: 583 SIFHADPVIWRSLLASCRIHRDLERGQLVAN--RIMELEPTSSASYV 627



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/309 (20%), Positives = 118/309 (38%), Gaps = 45/309 (14%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   ++  ++   +L     G Q+     K GF     + N+ + MY++ G      
Sbjct: 416 LKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAAT 475

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F EM   ++VSW+ ++S   Q+G     L  + +M     +PNE     V+  C   G
Sbjct: 476 RRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGG 535

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCS-VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             + G   +    K          C+ V++   + G +A AE                  
Sbjct: 536 LVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAE------------------ 577

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
                          +S+ +F     D   + + L  C +  D + G+ +   I+  E  
Sbjct: 578 -------------AFISNSIFHA---DPVIWRSLLASCRIHRDLERGQLVANRIMELEPT 621

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISWNTLFGG----FSENKNPG 329
            S S V  L +MY+ +  +  A K  + M  + V     +SW  L  G     + +K+  
Sbjct: 622 SSASYV-ILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHP 680

Query: 330 QTASLFHKF 338
           ++++++ K 
Sbjct: 681 ESSAIYTKL 689



 Score = 40.8 bits (94), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           +++ + ++ AY + G    AR   D+    N  + +N LI AY+  GL   ++E   + +
Sbjct: 43  LFLRNTLLAAYCRLGGPLPARRLLDEMPRRN-AVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
            A +   + ++ + ++ACS  G +  G     ++    G+         LV M S+ G +
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAG-RAVHALAILDGLSSGVFVSNSLVSMYSKCGEM 160

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            +A+ V ++   +     + SL+SG    G +E
Sbjct: 161 GEARRVFDVAE-ERDDVSWNSLVSGYVRAGARE 192


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/578 (27%), Positives = 304/578 (52%), Gaps = 5/578 (0%)

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           + F  K      A ++F  ++   +  WN ++   +      E L   S M  +    D 
Sbjct: 1   MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +T   AL+ C  + + + G  IHG + +   +   + + ++LI MYIK   M  A ++F+
Sbjct: 61  FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLD 364
            +   D+++W+++  GF +N +P Q    F + ++ S   P+ VT   L+  C KL +  
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG  +    +  GF ++ ++ +SL+  + +  A + A ++F  ++ K++ +W+ +++ Y 
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N   A+ L  F ++ + G E N  T   V++ C  + + +   + H   I+ G  +   
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH-SLVEA 543
           + ++L+  Y+     + ++   +   R D+ SW A++S     G  H ++  F   L+E 
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             +PD  ++  +L SC+ +G  ++ K  H +VIK GF++  ++ +++++ Y++CG +  A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACS 662
              F+      D +V+ +LI  Y  HG  ++A+E F+ M K + ++P++ TF+S++SACS
Sbjct: 421 SKVFN-GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+ +G  +FK M + Y + P+ + Y  LVD+L R G L+ A  + + MPF P+P + 
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LL  CRIH N E+ E  ++KL  L   +   ++L+S
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/523 (25%), Positives = 258/523 (49%), Gaps = 14/523 (2%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F EM +R+L  W  ++ +  +  +++  L  +  M  +   P+ F +   +K C  + 
Sbjct: 15  QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74

Query: 160 ASEFGYSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              +G  IH F  K + +  + +VG S++  Y K G +  A R+F  +   D+  W++M+
Sbjct: 75  EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134

Query: 219 GGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
            G+   G  ++A+     M+    +T D+ T I  +  C+ +++  +GR +HG +IR   
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +S+VN+L++ Y KS     A  +F+ +A+KDVISW+T+   + +N    +   +F+ 
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            +  G+ PN  T   +L+ C    DL+ G +   LA+  G   E  V+++L+ M+ +C +
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVE 456
            E A++VF  +  K++ +W  L+SG+  N      ++ F   + E+    +      V+ 
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +C      +     H  +IK GF S  +I +SL++ Y   G L N+ +  NG    D   
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           W ++++     G   +A+  F+ +V++ E KP+E    +IL++C+  G       I   +
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494

Query: 576 I---KLGFNTEVYVASAVIDAYAKCGDIKGA-----RMAFDQS 610
           +   +L  N E Y  + ++D   + GD+  A     RM F  +
Sbjct: 495 VNDYRLAPNLEHY--AVLVDLLGRVGDLDTAIEITKRMPFSPT 535



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 240/523 (45%), Gaps = 37/523 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           + D   L  +L     L+    G  +HG + K +   +D+++ ++LI MY KCG     L
Sbjct: 57  KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSM 158
           R+FDE+ + ++V+W+ +VS   +NG     ++ +  M   +   P+   + +++  C  +
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             S  G  +H F ++     +  +  S+LN YAK      A  +F  I+  DV  W+ +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G   EAL V + M+ +G   +  T +  LQ C+   D + GR+ H L IR  +E
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + +  AL+DMY+K    + A+ VF R+  KDV+SW  L  GF+ N    ++   F   
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356

Query: 339 IL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +L + +RP+ +    +L  C +L  L+         +  GF     + +SL+ ++ RCG+
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGS 416

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVE 456
           +  A  VF+ ++ K+   W  L++GY  +      L+TF ++ +S  V+ N  TF  ++ 
Sbjct: 417 LGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C            H  +I  G          + K  VN  +L  + E            
Sbjct: 477 ACS-----------HAGLIHEGL--------RIFKLMVNDYRLAPNLE-----------H 506

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +  ++  L   G    A+ I   +  +   P   ILGT+L +C
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFS---PTPQILGTLLGAC 546


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 189/702 (26%), Positives = 343/702 (48%), Gaps = 18/702 (2%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  I+  G +N++F    L+A Y+      +   +F  +  +++  W  I+ +   NG++
Sbjct: 30  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCS 185
                 Y+ M+ +  +PN+F V  V+  C  +     G +IH    K+ +   N  +G S
Sbjct: 90  QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
            +  Y+K G V +A  +F  I+  DV  W A+I GY         L  +  M   G T +
Sbjct: 150 FIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPN 209

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  +  Q C  +     G+ +HGL +++   C   + + ++ MY +    + A++ F 
Sbjct: 210 YKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFC 269

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++  KD+ISW ++    S+     +   LF +   S   P+ +  S +L   G    +  
Sbjct: 270 KLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFE 329

Query: 366 G------LQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           G      +  QC AL         +T ++L+ M+C+ G +  A+ +F +  +K+   W+ 
Sbjct: 330 GKAFHARILKQCCAL-------SGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWST 381

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ GY         +     +   G E +  +   V+ +C +     +   IH   IK  
Sbjct: 382 MILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNS 441

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                 + +SL+  Y   G +  ++   +   + D+ SW  ++S+    G   EA+ +F 
Sbjct: 442 IIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFD 501

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +V+    P++     +L++CA + +    + IH ++ + GF + + + +A+ID YAKCG
Sbjct: 502 KMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCG 561

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           +++ +R  F+ S    DVI++N +I  Y  HG V  AMEIF  M+ +N++P+  TF+S++
Sbjct: 562 ELETSRKLFN-STEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLL 620

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC+H G V +G  LF  M  +YG++PS   Y  ++D+L R+G LE A+ ++  MP  P 
Sbjct: 621 SACNHTGHVLEGRHLFDRMQ-KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPD 679

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            TV+ SLLS C+IH   E+G   +   +   PKND  +++LS
Sbjct: 680 GTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILS 721



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 142/564 (25%), Positives = 250/564 (44%), Gaps = 2/564 (0%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  +HG   KLG F  +  + ++ I MYSKCG+      +F E+  +++V+WT ++   +
Sbjct: 127 GMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYV 186

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QN E   GLK   +M   G  PN   +GS  + CV + A   G  +H  ALK        
Sbjct: 187 QNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV 246

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y++ G    A R F  +   D+  W ++I  ++  G   E L++   M    
Sbjct: 247 VKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASE 306

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D+      L G         G+  H  I++     S    NAL+ MY K   +  A 
Sbjct: 307 IIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTAN 366

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F     K    W+T+  G+S      +  S   + +L G  P+  +   ++  C ++ 
Sbjct: 367 KIFHSF-HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVG 425

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +++G  + C A+    ++  +V +SL+ M+ + G V     +F     +++ +WN L+S
Sbjct: 426 AINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLIS 485

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +   A+ +  F  + +  V  N  T   V+  C    +     +IH  I + GF S
Sbjct: 486 SYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFES 545

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I ++LI  Y   G+L+ S +  N  E  D+  W  M+S     GH   A+ IF  + 
Sbjct: 546 NITIRTALIDMYAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLME 605

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E+  KP+     ++L++C   G     + +   + K G    +   +++ID   + G ++
Sbjct: 606 ESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLE 665

Query: 602 GARMAFDQSFNSNDVIVYNTLIMA 625
            A         + D  V+ +L+ A
Sbjct: 666 AAEALVLSMPITPDGTVWGSLLSA 689



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 143/543 (26%), Positives = 257/543 (47%), Gaps = 39/543 (7%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L + V G  +HG  +K GF     +++ +++MYS+CG      R F ++ +++L+SWT 
Sbjct: 222 DLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTS 281

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF---AL 172
           I++   + G     L ++ +M+ +  +P+E  +      C+ MG   FG S   F   A 
Sbjct: 282 IIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS-----CMLMG---FGNSDRIFEGKAF 333

Query: 173 KIRIEK-----NPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCG 225
             RI K     +     ++L+ Y K G +  A ++F+S   SS+D   W+ MI GY++ G
Sbjct: 334 HARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSED---WSTMILGYSNMG 390

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              + ++ +  ML  G   D  + ++ +  CS V   +IGR IH   I++ +  ++S+ N
Sbjct: 391 QKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVAN 450

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L+DMY KS  +   +++F R   +DVISWNTL   + ++    +   LF K +     P
Sbjct: 451 SLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYP 510

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N VT  I+L  C  L  LD G ++       GF     + ++LI M+ +CG +E +  +F
Sbjct: 511 NKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLF 570

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           ++   +++  WN ++S Y  +      ++ F  + ES ++ N  TF  ++  C  + +  
Sbjct: 571 NSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVL 630

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL--------DMASW 517
               +   + K G        +S+I      G L+        AE L        D   W
Sbjct: 631 EGRHLFDRMQKYGIEPSLKHYASIIDLLGRSGSLE-------AAEALVLSMPITPDGTVW 683

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPD-EYILGTILNSCAAIGAYQRTKSIHPFVI 576
           G+++SA          V +    +E+  K D  YI+ + L SC  +G +   + +   + 
Sbjct: 684 GSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSC--LGRWDEVEKVRDMMK 741

Query: 577 KLG 579
           K G
Sbjct: 742 KRG 744



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 1/171 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   +L S   G ++H +I + GF ++I ++  LI MY+KCG      ++F+   ER++
Sbjct: 519 LSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDV 578

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           + W +++S    +G  +  ++++  M+ +   PN     S++  C   G    G  +   
Sbjct: 579 ILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDR 638

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
             K  IE +     S+++   + G + AAE +  S+  + D   W +++  
Sbjct: 639 MQKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSA 689


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 158/516 (30%), Positives = 269/516 (52%), Gaps = 4/516 (0%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF   L+ C+  AD   GR +H  +    +        AL +MY K      A +VF+RM
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 308 ADKDVISWNTLFGGFSENKNPGQT--ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
             +D ++WN +  G++ N  P     A +  +    G RP+ VT   +L  C     L  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
             ++   AL  G  +  NV+++++  +C+CGAVE A +VFD +  +N  +WN ++ GY  
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N    + +  F  + + GV+V   +    ++ C        V ++H  +++ G SS   +
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257

Query: 486 CSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
            ++LI +Y    + D + + F+    +    SW AM+          +A  +F  +    
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD + L +++ + A I    + + IH + I+   + +VYV +A+ID Y+KCG +  AR
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD + + + VI +N +I  Y  HG    A+E+F++MK     P++ TF+SV++ACSH 
Sbjct: 378 RLFDSARDRH-VITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F SM   YG++P  + YG +VD+L R G L++A   I+ MP +P  +VY +
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +L  C++H N EL E +++ +  L P+    HVLL+
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLA 532



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 223/476 (46%), Gaps = 25/476 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +   G  ++      L  MY KC       RVFD M  R+ V+W  +V+   +
Sbjct: 35  GRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRDRVAWNAVVAGYAR 94

Query: 123 NGEFDMGLKMYVDMK--TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NG     ++  V M+    G  P+   + SV+  C    A      +H FAL+  +++  
Sbjct: 95  NGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELV 154

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  +VL+ Y K G V AA  VF  +   +   WNAMI GYA  G   EA+ +   M+ E
Sbjct: 155 NVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQE 214

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +   + + ALQ C  +   D  R++H L++R  +  ++S+ NALI  Y K    D A
Sbjct: 215 GVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLA 274

Query: 301 FKVFERMADKDV-ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
            +VF  + +K   ISWN +  GF++N+ P     LF +  L   RP+  T   ++     
Sbjct: 275 AQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVAD 334

Query: 360 LLDLDLGLQLQCLALHCGF-----LDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           + D      LQ   +H G+     LD++  V ++LI M+ +CG V +A  +FD+   +++
Sbjct: 335 ISD-----PLQARWIH-GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHV 388

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQ 469
            TWN ++ GY  +      ++ F  +  +G   N  TF  V+  C  +    E Q+    
Sbjct: 389 ITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFAS 448

Query: 470 IHGAI-IKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
           +     ++ G    G +   L ++    G+LD ++ F  N      ++ +GAM+ A
Sbjct: 449 MKKDYGLEPGMEHYGTMVDLLGRA----GKLDEAWSFIKNMPIEPGISVYGAMLGA 500



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 184/417 (44%), Gaps = 3/417 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++K+C +      G ++H       +        ++ N Y K    A A RVF  + S 
Sbjct: 21  ALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSR 80

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GITMDKYTFINALQGCSLVADFDIGRQ 267
           D   WNA++ GYA  G    A+  V  M  E  G   D  T ++ L  C+        R+
Sbjct: 81  DRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACRE 140

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H   +R+ ++  +++  A++D Y K   ++ A  VF+ M  ++ +SWN +  G+++N N
Sbjct: 141 VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGN 200

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +  +LF + +  G      +    L+ CG+L  LD   ++  L +  G     +VT++
Sbjct: 201 ATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNA 260

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           LI  + +C   ++A  VF+ +  K    +WN ++ G+  N C  D  + F  +    V  
Sbjct: 261 LITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRP 320

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   V+       +      IHG  I+       Y+ ++LI  Y   G++  +    
Sbjct: 321 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLF 380

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           + A    + +W AM+      G    AV +F  +   G  P+E    ++L +C+  G
Sbjct: 381 DSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 1/318 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + L   L    + ++     +VH   ++ G    + +   ++  Y KCG       
Sbjct: 116 RPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARA 175

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD M  RN VSW  ++     NG     + ++  M   G    + +V + ++ C  +G 
Sbjct: 176 VFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGY 235

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG-CWNAMIG 219
            +    +H   +++ +  N  V  +++  YAK      A +VF  + +      WNAMI 
Sbjct: 236 LDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMIL 295

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+       +A  + + M  E +  D +T ++ +   + ++D    R IHG  IR +++ 
Sbjct: 296 GFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQ 355

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + ++ ALIDMY K   +  A ++F+   D+ VI+WN +  G+  +        LF +  
Sbjct: 356 DVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMK 415

Query: 340 LSGSRPNHVTFSILLRQC 357
            +GS PN  TF  +L  C
Sbjct: 416 GTGSLPNETTFLSVLAAC 433



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 60/125 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   L   +    ++   +    +HG+ ++     D+++   LI MYSKCG      
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIAR 377

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD   +R++++W  ++     +G     ++++ +MK  G +PNE    SV+  C   G
Sbjct: 378 RLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAG 437

Query: 160 ASEFG 164
             + G
Sbjct: 438 LVDEG 442


>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
 gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
          Length = 643

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 166/585 (28%), Positives = 291/585 (49%), Gaps = 5/585 (0%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + ++G  ++  Y K G V  A  VF  I   ++  W  M+G YA  G+G EAL +   + 
Sbjct: 46  DRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGLFREIQ 105

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+ +D  T ++AL+ C++  D + GR IH        E  I +  AL+ MY K   ++
Sbjct: 106 SRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGKCGHLE 165

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  VF  + +++ +SWN +   +++N +  +   L+      G +P+  TF  +L   G
Sbjct: 166 EAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLD--G 223

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
              + + G ++    L  GF     + ++L+ M+   G V+ A  VFD ++ K + +WN 
Sbjct: 224 WKGEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNA 283

Query: 419 LLSGYCFNCCDADVLKTFCNIWE---SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +L+ Y  N      +  F  + E   + VE N  TF  ++  C  +   +   +IH  + 
Sbjct: 284 MLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVA 343

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G  S   +  +LI  Y   G L  +    +     ++ SW  ++ +    G   EA+ 
Sbjct: 344 SLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALG 403

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +   +   G KPD++   ++L++C+A  A    K+IH  +   G   +  + +A+I+ Y 
Sbjct: 404 VHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYG 463

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++ AR  F    +  +++ +N+++ A    G + + +EI   M L  + P + TF+
Sbjct: 464 KCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFL 523

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           SV+ ACSH G + +G  LF S    YG+  +   Y C+VD+L R G LE+A+ V+  MPF
Sbjct: 524 SVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPF 583

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           Q +   + +LL  CRIH + E G  A++ ++ L P+N A + LLS
Sbjct: 584 QANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLS 628



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 171/603 (28%), Positives = 283/603 (46%), Gaps = 15/603 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q    I + GF  D +L N L+  Y KCG       VFD +  RN+ SWT+++ A   NG
Sbjct: 33  QAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNG 92

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                L ++ ++++ G   +   + S +K C   G  E G  IH  A  +  E    V  
Sbjct: 93  HGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVAT 152

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ Y K G +  A+ VF ++   +   WNAM+  YA  G+  EA+ +   M FEGI  
Sbjct: 153 ALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKP 212

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  TF++ L G     + + G +IH  ++ S    + ++ NAL+ MY     +D A  VF
Sbjct: 213 DATTFVSVLDGWK--GEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVF 270

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHK---FILSGSRPNHVTFSILLRQCGKLL 361
           + +A+K V+SWN +   +++N   G+   LF K      +   PN VTF  LL  C    
Sbjct: 271 DGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATG 330

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G ++       G L   +V  +LI M+  CG + +A SVFD+V +KN+ +WN L+ 
Sbjct: 331 FLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIG 390

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  +    + L     +   G++ +  TF  V+  C  SE       IH  I  +G   
Sbjct: 391 SYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLER 450

Query: 482 CGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              I ++LI  Y   G L+ +   F +   R ++ +W +M++A   +G   + V I H +
Sbjct: 451 DEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMM 510

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSI---HPFVIKLGFNTEVYVASAVIDAYAKC 597
              G  PDE    ++L +C+  G+ Q+   +         +  NT+ YV   V+D   + 
Sbjct: 511 GLEGIMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYV--CVVDILGRV 568

Query: 598 GDIKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           G ++ A+   ++  F +NDV  + TL+ A   H    +     D   +  L P  A   +
Sbjct: 569 GRLEEAQEVLNRMPFQANDV-AWMTLLGACRIHRDFEQGRRAAD--YVIELDPQNAAPYA 625

Query: 657 VMS 659
           ++S
Sbjct: 626 LLS 628



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 242/487 (49%), Gaps = 7/487 (1%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ C+   D    +Q    I R        + N L+  Y K   +  A +VF+R+  +++
Sbjct: 19  LRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNI 78

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
            SW  + G +++N +  +   LF +    G   ++VT    L+ C    DL+ G  +   
Sbjct: 79  FSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHAS 138

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A   G+  E  V ++L+ M+ +CG +E A +VF  +  +N  +WN +L+ Y  N    + 
Sbjct: 139 ARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEA 198

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ +  +   G++ +  TF  V++   + E +    +IH  ++++GF S   + ++L+  
Sbjct: 199 VRLYRLMCFEGIKPDATTFVSVLDG-WKGEGEHGT-RIHDQVLESGFGSNTTLANALVSM 256

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE---AGEKPDE 549
           Y + G++D++    +G     + SW AM++A    G   +AV +F  + E   A  +P+ 
Sbjct: 257 YGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNS 316

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
                +L +CAA G  +  + IH  V  LG  + + V  A+I+ Y++CG++  A+  FD 
Sbjct: 317 VTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFD- 375

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           S    +++ +N LI +YA  G   EA+ +  KM+L  L+P + TF+SV+ ACS    + +
Sbjct: 376 SVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAE 435

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +  ++ +  G++        L+++  + G LE A++V   M  + +   + S+L+  
Sbjct: 436 GKAI-HALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAA 494

Query: 730 RIHGNKE 736
              G  E
Sbjct: 495 CTKGGLE 501



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 213/461 (46%), Gaps = 29/461 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H     LG+ ++I +   L++MY KCG+      VF  + ERN VSW  +++A  Q
Sbjct: 132 GRGIHASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQ 191

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  +++Y  M   G  P+     SV+      G  E G  IH   L+     N  +
Sbjct: 192 NGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGW--KGEGEHGTRIHDQVLESGFGSNTTL 249

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV---VSSMLF 239
             ++++ Y   G V  A  VF  I+   V  WNAM+  YA  G   +A+++   +  M  
Sbjct: 250 ANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRR 309

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             +  +  TF+N L  C+     + GR+IH  +    +  ++S+  ALI+MY +   +  
Sbjct: 310 ALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVL 369

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF+ +  K+++SWN L G ++ + +  +   +  K  L G +P+  TF  +L  C  
Sbjct: 370 AKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSA 429

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF-DNVSYKNITTWNE 418
              L  G  +  L    G   +E + ++LI ++ +CG++E A +VF D  S +N+ TWN 
Sbjct: 430 SEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNS 489

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +L+  C      D ++    +   G+  +  TF  V+  C            HG  I+ G
Sbjct: 490 MLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACS-----------HGGSIQQG 538

Query: 479 ---FSSCG--YICSSLIKSYV-------NFGQLDNSFEFSN 507
              F S G  Y  ++  K YV         G+L+ + E  N
Sbjct: 539 LDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLN 579



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 177/368 (48%), Gaps = 9/368 (2%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +LR C    DL    Q Q      GF  +  + + L+  + +CG+V  A  VFD +  +N
Sbjct: 18  ILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRN 77

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I +W  +L  Y  N    + L  F  I   G+ ++  T    ++ C  + + +    IH 
Sbjct: 78  IFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHA 137

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNH 531
           +    G+ S   + ++L+  Y   G L+ +   F+   ER +  SW AM++A    GH  
Sbjct: 138 SARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVER-NRVSWNAMLAAYAQNGHCE 196

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           EAV ++  +   G KPD     ++L+     G  +    IH  V++ GF +   +A+A++
Sbjct: 197 EAVRLYRLMCFEGIKPDATTFVSVLDGWKGEG--EHGTRIHDQVLESGFGSNTTLANALV 254

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF---DKMKLANLQ 648
             Y   G +  AR  FD       V+ +N ++ AYA +G   +A+++F   D+M+ A ++
Sbjct: 255 SMYGSGGRVDDARYVFD-GIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVE 313

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P+  TFV+++ AC+  G ++ G  +   + S  G+  +    G L++M S  G L  AK 
Sbjct: 314 PNSVTFVNLLVACAATGFLEAGRKIHAEVAS-LGLLSTLSVGGALINMYSECGNLVLAKS 372

Query: 709 VIEIMPFQ 716
           V + +P +
Sbjct: 373 VFDSVPHK 380



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 126/264 (47%), Gaps = 9/264 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  +  LG  + + +   LI MYS+CG       VFD +  +NLVSW +++ +   
Sbjct: 335 GRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAG 394

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G+    L ++  M+  G  P++F   SV+  C +  A   G +IH       +E++  +
Sbjct: 395 DGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAI 454

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           G +++N Y K G +  A  VF  + S  ++  WN+M+      G   + + ++  M  EG
Sbjct: 455 GTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEG 514

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA----LIDMYIKSSGM 297
           I  D+ TF++ L  CS       G     L + + V+  I+        ++D+  +   +
Sbjct: 515 IMPDELTFLSVLFACSHGGSIQQGLD---LFLSAGVDYGIATNTKHYVCVVDILGRVGRL 571

Query: 298 DYAFKVFERMA-DKDVISWNTLFG 320
           + A +V  RM    + ++W TL G
Sbjct: 572 EEAQEVLNRMPFQANDVAWMTLLG 595



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 2/160 (1%)

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +IL  CA+       K     + + GF  + Y+ + ++ AY KCG ++ AR  FD+    
Sbjct: 17  SILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDR-IQR 75

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            ++  +  ++ AYA +G   EA+ +F +++   +     T VS + AC+  G +++G  +
Sbjct: 76  RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGI 135

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             S  S  G +        LV M  + G+LE+AK V   +
Sbjct: 136 HASARS-LGYESEIIVATALVSMYGKCGHLEEAKAVFATL 174


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 161/518 (31%), Positives = 266/518 (51%), Gaps = 10/518 (1%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF + L+ C+   D   GR +H  +    ++       AL +MY K      A +VF+RM
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLG 366
             +D ++WN L  G++ N        +  +     G RP+ +T   +L  C     L   
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            +    A+  G  +  NV ++++  +C+CG +  A  VFD +  KN  +WN ++ GY  N
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETC----CRSENQQMVGQIHGAIIKTGFSSC 482
               + L  F  + E GV+V   +    ++ C    C  E  +    +H  +++ G  S 
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMR----VHELLVRIGLDSN 296

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y    ++D +    +  +R    SW AM+      G + +AV +F  +  
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KPD + L +++ + A I    + + IH + I+L  + +VYV +A+ID YAKCG +  
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR+ F+ S     VI +N +I  Y  HG    A+E+F++MK   + P++ TF+SV+SACS
Sbjct: 417 ARILFN-SARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACS 475

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLVD+G   F SM   YG++P  + YG +VD+L R G L++A   I+ MP  P  +VY
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++L  C++H N EL E +++K+  L P+    HVLL+
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLA 573



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 13/403 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +   G  ++      L  MY+KC       RVFD M  R+ V+W  +V+   +
Sbjct: 78  GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYAR 137

Query: 123 NGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG   M ++M V M+   G  P+   + SV+  C +  A       H FA++  +E+   
Sbjct: 138 NGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVN 197

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+ Y K GD+ AA  VF  + + +   WNAMI GYA  G   EAL + + M+ EG
Sbjct: 198 VATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEG 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +   + + ALQ C  +   D G ++H L++R  ++ ++S++NALI MY K   +D A 
Sbjct: 258 VDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLAS 317

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF+ +  +  +SWN +  G ++N        LF +  L   +P+  T   L+     L 
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT---LVSVIPALA 374

Query: 362 DLDLGLQLQ-----CLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           D+   LQ +      + LH   LD++  V ++LI M+ +CG V +A  +F++   +++ T
Sbjct: 375 DISDPLQARWIHGYSIRLH---LDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           WN ++ GY  +      ++ F  +   G+  N  TF  V+  C
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSAC 474



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 246/566 (43%), Gaps = 6/566 (1%)

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           +    L  +V M + G  P      S++K+C + G    G ++H       I+       
Sbjct: 39  DLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAAT 98

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GIT 243
           ++ N YAK    A A RVF  +   D   WNA++ GYA  G    A+ +V  M  E G  
Sbjct: 99  ALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGER 158

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T ++ L  C+        R+ H   IRS +E  +++  A++D Y K   +  A  V
Sbjct: 159 PDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVV 218

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M  K+ +SWN +  G+++N +  +  +LF++ +  G     V+    L+ CG+L  L
Sbjct: 219 FDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCL 278

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           D G+++  L +  G     +V ++LI M+ +C  V++A  VFD +  +   +WN ++ G 
Sbjct: 279 DEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGC 338

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N C  D ++ F  +    V+ +  T   V+       +      IHG  I+       
Sbjct: 339 AQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDV 398

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y+ ++LI  Y   G+++ +    N A    + +W AM+      G    AV +F  +   
Sbjct: 399 YVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI 458

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKG 602
           G  P+E    ++L++C+  G     +     + +  G    +     ++D   + G +  
Sbjct: 459 GIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 603 ARMAFDQSFNSND-VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
           A  AF Q    +  + VY  ++ A   H  V  A E     K+  L P +  +  +++  
Sbjct: 519 A-WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEE--SAQKIFELGPQEGVYHVLLANI 575

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSP 687
                + K     ++   + G+Q +P
Sbjct: 576 YANASMWKDVARVRTAMEKNGLQKTP 601



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 148/341 (43%), Gaps = 16/341 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I L   L    N ++     + H   ++ G    + +   ++  Y KCG       
Sbjct: 158 RPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARV 217

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD M  +N VSW  ++    QNG+    L ++  M   G    + +V + ++ C  +G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  +H   ++I ++ N  V  +++  Y+K   V  A  VF  +       WNAMI G
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILG 337

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            A  G   +A+ + + M  E +  D +T ++ +   + ++D    R IHG  IR  ++  
Sbjct: 338 CAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD 397

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + ++ ALIDMY K   ++ A  +F    ++ VI+WN +  G+  +        LF +   
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKS 457

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
            G  PN  TF  +L  C                 H G +DE
Sbjct: 458 IGIVPNETTFLSVLSACS----------------HAGLVDE 482



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           +S+ L++R     +HG+ ++L    D+++   LI MY+KCG       +F+   ER++++
Sbjct: 376 ISDPLQAR----WIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVIT 431

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           W  ++     +G     ++++ +MK+ G +PNE    SV+  C   G  + G
Sbjct: 432 WNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEG 483


>gi|302803901|ref|XP_002983703.1| hypothetical protein SELMODRAFT_118828 [Selaginella moellendorffii]
 gi|300148540|gb|EFJ15199.1| hypothetical protein SELMODRAFT_118828 [Selaginella moellendorffii]
          Length = 963

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 182/701 (25%), Positives = 337/701 (48%), Gaps = 13/701 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAAI 121
           G  VH +I +     D  + + ++ MY KCG      RVFDE    R++VSW  +++A  
Sbjct: 239 GKLVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFF 298

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N   +   + +  M+  GF PN     +++  C  + A   G +++    +      P 
Sbjct: 299 LNVLLEEAFRCFRTMQLQGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPG 358

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-WNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +  +++N Y+  G++ AA ++      DDV   W++ +   A  GY  E L V+  +   
Sbjct: 359 IEIALVNMYSSCGELDAAYQILQG--RDDVSLPWSSFLRATARYGYSNETLAVLRRIQLN 416

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  +    ++ L  C        G  IH L++ + ++  + +  AL  MY K   +D+A
Sbjct: 417 GIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHA 476

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F+ M  +D ++WN +   +S          LF   +  G R N  +F I+L      
Sbjct: 477 RLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYP 536

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT--WNE 418
             L +G  +  +A    + +++ V  +L+ M+ R G +E A  +FD VS K  +T  W  
Sbjct: 537 AMLLIGESVHSMASQKNYDEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTA 596

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S    +   AD    F  +   GV  +  T            N   +  ++ A  +  
Sbjct: 597 MISACVEHREFADAQLLFRRMQLEGVLPDSFTLACAAAVV----NSLEMTLLNVAARQRS 652

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +   +C++L+++Y + G+LD + +     E     SW  +++A      +H+ + ++H
Sbjct: 653 LDNNVRLCNALVEAYGSKGELDKALDMFESTEEKTQTSWSLVITAATENARHHQGLALYH 712

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            ++  G +PD+  L   L  C+++ + +  + IH  V++ G   +  VASA++D Y KCG
Sbjct: 713 QMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCG 772

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            ++ +R  F +S    D +++N+L+   A  G   +A+ +F  M+   L+   A+FVS++
Sbjct: 773 SLEASRAVFQRS-EKQDPVLWNSLLAVEARCG--GDALRLFHWMQQDGLRSDGASFVSLL 829

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           +ACSH G+ DK    F +M   +G+ P+ + +GC+VD+L+R G LE A+ +I     +  
Sbjct: 830 AACSHAGVEDKAWDYFAAMKWDFGVVPASEHFGCMVDLLARTGKLEAAEELIFKSRLRLD 889

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
             ++ +LL+ C  +G+   GE A    L+L P+N   +V L
Sbjct: 890 SRLWITLLAACNANGDVSRGERAGMNALVLDPQNSGLYVTL 930



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 161/677 (23%), Positives = 295/677 (43%), Gaps = 25/677 (3%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G      + + G   D+ L N L+ MY  C        VFD + ER  VSW +++SA 
Sbjct: 136 VAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQERTSVSWNVMLSAH 195

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G F M L ++  M+ +GF P      +V++ C ++G+ E G  +H    +   E +P
Sbjct: 196 ARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVHSNIQEQIGELDP 255

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            VG +V+N Y K G V  A RVF        V  WN+MI  +       EA     +M  
Sbjct: 256 QVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLLEEAFRCFRTMQL 315

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G   +  TF+N L GC+ +     G  ++G++  +E      I  AL++MY     +D 
Sbjct: 316 QGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPGIEIALVNMYSSCGELDA 375

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A+++ +   D   + W++     +      +T ++  +  L+G  PN       L  C  
Sbjct: 376 AYQILQGRDDVS-LPWSSFLRATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVA 434

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
              L  G  +  L L  G      V ++L  M+ +C +++ A  +FD +  ++   WN +
Sbjct: 435 PGFLRSGTGIHELVLEAGIQHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAI 494

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y        V++ F ++ + GV  N  +F  V+ +        +   +H    +  +
Sbjct: 495 MSLYSSYGRHEGVIELFRSMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMASQKNY 554

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                +  +L+  Y   G+L+ + E  +   A+    A W AM+SA V      +A  +F
Sbjct: 555 DEDDVVAGALVTMYARLGKLEKAREIFDRVSAKEPSTALWTAMISACVEHREFADAQLLF 614

Query: 538 HSLVEAGEKPDEYIL---GTILNSCAA----IGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             +   G  PD + L     ++NS       + A QR+            +  V + +A+
Sbjct: 615 RRMQLEGVLPDSFTLACAAAVVNSLEMTLLNVAARQRS-----------LDNNVRLCNAL 663

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ++AY   G++  A   F +S        ++ +I A   +    + + ++ +M L   +P 
Sbjct: 664 VEAYGSKGELDKALDMF-ESTEEKTQTSWSLVITAATENARHHQGLALYHQMLLEGYRPD 722

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + + ++ +  CS    +  G  + + +  + G++P       LVDM  + G LE ++ V 
Sbjct: 723 KVSLLAALGVCSSLASLKSGRRIHEQV-VEAGLEPDEVVASALVDMYGKCGSLEASRAVF 781

Query: 711 EIMPFQPSPTVYRSLLS 727
           +    Q  P ++ SLL+
Sbjct: 782 QRSEKQ-DPVLWNSLLA 797



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 136/587 (23%), Positives = 250/587 (42%), Gaps = 10/587 (1%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM-AERNLVSWTLIVSAAIQNGEFDMGLKM 132
           GF  +  +  +L+ MY  CG      R+F E  +  N+V+WT I++A  ++G F   + +
Sbjct: 47  GFDIEDRIGTSLVNMYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDL 106

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           +   +  G + ++ +  +V+  C   G    G        +  +E +  +G +++N Y  
Sbjct: 107 FHRTQLEGVLLDKTSFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGL 166

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
              V  A  VF SI       WN M+  +A  G    +L V   M  +G   +  TF+  
Sbjct: 167 CHSVDEACSVFDSIQERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAV 226

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF-ERMADKD 311
           L+ C+ V   + G+ +H  I     E    + +A+++MY K   ++ A +VF E+   + 
Sbjct: 227 LESCAAVGSLETGKLVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRS 286

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V+SWN++   F  N    +    F    L G  PN  TF  LL  C  L  L  G  +  
Sbjct: 287 VVSWNSMIAAFFLNVLLEEAFRCFRTMQLQGFHPNFATFVNLLHGCTDLEALAEGDAVYG 346

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCC 428
           +     F  E  +  +L+ M+  CG ++ A+ +    D+VS      W+  L        
Sbjct: 347 MVAETEFHSEPGIEIALVNMYSSCGELDAAYQILQGRDDVSLP----WSSFLRATARYGY 402

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + L     I  +G+  N       +  C      +    IH  +++ G      + ++
Sbjct: 403 SNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAGIQHHLVVATA 462

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L   Y     LD++    +G  + D  +W A+MS     G +   + +F S+++ G + +
Sbjct: 463 LFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFRSMLQEGVRFN 522

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                 +L+S          +S+H    +  ++ +  VA A++  YA+ G ++ AR  FD
Sbjct: 523 RASFCIVLSSLVYPAMLLIGESVHSMASQKNYDEDDVVAGALVTMYARLGKLEKAREIFD 582

Query: 609 Q-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           + S       ++  +I A   H   ++A  +F +M+L  + P   T 
Sbjct: 583 RVSAKEPSTALWTAMISACVEHREFADAQLLFRRMQLEGVLPDSFTL 629



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/585 (20%), Positives = 249/585 (42%), Gaps = 18/585 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L++   G  V+G + +  F ++  ++  L+ MYS CG      ++     + +L  W+ 
Sbjct: 334 DLEALAEGDAVYGMVAETEFHSEPGIEIALVNMYSSCGELDAAYQILQGRDDVSL-PWSS 392

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            + A  + G  +  L +   ++ NG  PN  A+ S +  CV+ G    G  IH   L+  
Sbjct: 393 FLRATARYGYSNETLAVLRRIQLNGIFPNTTALVSGLSACVAPGFLRSGTGIHELVLEAG 452

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           I+ +  V  ++   Y K   +  A  +F  +   D   WNA++  Y+  G     + +  
Sbjct: 453 IQHHLVVATALFVMYGKCKSLDHARLLFDGMVQRDSVAWNAIMSLYSSYGRHEGVIELFR 512

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           SML EG+  ++ +F   L      A   IG  +H +  +   +    +  AL+ MY +  
Sbjct: 513 SMLQEGVRFNRASFCIVLSSLVYPAMLLIGESVHSMASQKNYDEDDVVAGALVTMYARLG 572

Query: 296 GMDYAFKVFERMADKDVIS--WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            ++ A ++F+R++ K+  +  W  +     E++       LF +  L G  P+  T +  
Sbjct: 573 KLEKAREIFDRVSAKEPSTALWTAMISACVEHREFADAQLLFRRMQLEGVLPDSFTLA-- 630

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
              C   +   L + L  +A     LD    + ++L+  +   G ++ A  +F++   K 
Sbjct: 631 ---CAAAVVNSLEMTLLNVAARQRSLDNNVRLCNALVEAYGSKGELDKALDMFESTEEKT 687

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
            T+W+ +++    N      L  +  +   G   +  +    +  C    + +   +IH 
Sbjct: 688 QTSWSLVITAATENARHHQGLALYHQMLLEGYRPDKVSLLAALGVCSSLASLKSGRRIHE 747

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +++ G      + S+L+  Y   G L+ S      +E+ D   W ++++     G +  
Sbjct: 748 QVVEAGLEPDEVVASALVDMYGKCGSLEASRAVFQRSEKQDPVLWNSLLAVEARCGGD-- 805

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA--- 589
           A+ +FH + + G + D     ++L +C+  G   +      +   + ++  V  AS    
Sbjct: 806 ALRLFHWMQQDGLRSDGASFVSLLAACSHAGVEDKA---WDYFAAMKWDFGVVPASEHFG 862

Query: 590 -VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            ++D  A+ G ++ A     +S    D  ++ TL+ A   +G VS
Sbjct: 863 CMVDLLARTGKLEAAEELIFKSRLRLDSRLWITLLAACNANGDVS 907



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 176/385 (45%), Gaps = 23/385 (5%)

Query: 342 GSRPNHVTFSILLRQCGK-------LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           G RPN  T   +L++C         L     G  ++ L    GF  E+ + +SL+ M+  
Sbjct: 5   GIRPNATTLVTILKECSTDGSKKRGLWIASAGKLIESLVRDGGFDIEDRIGTSLVNMYRI 64

Query: 395 CGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           CG +E A  +F    S  N+ TW  +++    +   ++ +  F      GV ++  +F  
Sbjct: 65  CGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKTSFLA 124

Query: 454 VVETCCRSENQQMVGQIHGAIIK-TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           VV  C    N  + G++   +++  G  +   + ++L+  Y     +D +    +  +  
Sbjct: 125 VVNACADCGNL-VAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSIQER 183

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
              SW  M+SA   QG+   ++ +F  +   G KP+      +L SCAA+G+ +  K +H
Sbjct: 184 TSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGKLVH 243

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             + +     +  V  AV++ Y KCG ++ A   FD+  +   V+ +N++I A+  + L+
Sbjct: 244 SNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLNVLL 303

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM------QPS 686
            EA   F  M+L    P+ ATFV+++  C+    + +G       D+ YGM         
Sbjct: 304 EEAFRCFRTMQLQGFHPNFATFVNLLHGCTDLEALAEG-------DAVYGMVAETEFHSE 356

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIE 711
           P     LV+M S  G L+ A  +++
Sbjct: 357 PGIEIALVNMYSSCGELDAAYQILQ 381



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/444 (21%), Positives = 193/444 (43%), Gaps = 13/444 (2%)

Query: 237 MLFEGITMDKYTFINALQGCSLVAD-------FDIGRQIHGLIIRSEVECSISIVNALID 289
           ML EGI  +  T +  L+ CS              G+ I  L+     +    I  +L++
Sbjct: 1   MLHEGIRPNATTLVTILKECSTDGSKKRGLWIASAGKLIESLVRDGGFDIEDRIGTSLVN 60

Query: 290 MYIKSSGMDYAFKVF-ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           MY     ++ A ++F E  +  +V++W  +    +E+ +  +   LFH+  L G   +  
Sbjct: 61  MYRICGRLEDARRIFREFHSPSNVVTWTGIITANAESGHFSEAIDLFHRTQLEGVLLDKT 120

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +F  ++  C    +L  G   Q L    G   +  + ++L+ M+  C +V+ A SVFD++
Sbjct: 121 SFLAVVNACADCGNLVAGRLAQRLVREAGLEADVVLGNTLVNMYGLCHSVDEACSVFDSI 180

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +   +WN +LS +         L  F  +   G +    TF  V+E+C    + +   
Sbjct: 181 QERTSVSWNVMLSAHARQGNFQMSLIVFRLMQLDGFKPEAITFLAVLESCAAVGSLETGK 240

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQ 527
            +H  I +        +  +++  Y   G ++ +   F     R  + SW +M++A    
Sbjct: 241 LVHSNIQEQIGELDPQVGDAVVNMYGKCGAVEEAARVFDEQGHRRSVVSWNSMIAAFFLN 300

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               EA   F ++   G  P+      +L+ C  + A     +++  V +  F++E  + 
Sbjct: 301 VLLEEAFRCFRTMQLQGFHPNFATFVNLLHGCTDLEALAEGDAVYGMVAETEFHSEPGIE 360

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDV-IVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            A+++ Y+ CG++  A          +DV + +++ + A A +G  +E + +  +++L  
Sbjct: 361 IALVNMYSSCGELDAAYQILQ---GRDDVSLPWSSFLRATARYGYSNETLAVLRRIQLNG 417

Query: 647 LQPSQATFVSVMSACSHKGLVDKG 670
           + P+    VS +SAC   G +  G
Sbjct: 418 IFPNTTALVSGLSACVAPGFLRSG 441



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 7/167 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D + L  +L +  +L S   G ++H  +V+ G   D  + + L+ MY KCG       
Sbjct: 720 RPDKVSLLAALGVCSSLASLKSGRRIHEQVVEAGLEPDEVVASALVDMYGKCGSLEASRA 779

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF    +++ V W  +++   + G     L+++  M+ +G   +  +  S++  C   G 
Sbjct: 780 VFQRSEKQDPVLWNSLLAVEARCG--GDALRLFHWMQQDGLRSDGASFVSLLAACSHAGV 837

Query: 161 SEFGYSIHCFALKIR---IEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
            +  +  +  A+K     +  +   GC V +  A+ G + AAE + +
Sbjct: 838 EDKAWD-YFAAMKWDFGVVPASEHFGCMV-DLLARTGKLEAAEELIF 882


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 170/645 (26%), Positives = 317/645 (49%), Gaps = 15/645 (2%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG---AS 161
           MA+R+  SW L ++   +NG     L+++  M   G  P+  +  +++    S+G     
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           EF +   C A  +    +  V  +VL  Y + G V+ A R F ++   +V  W+AMI  Y
Sbjct: 61  EFFHRTVCEASGL--GSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAY 118

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A  G+  +AL +   M  EG+  +  TF++ L  C+ +    +G+ IH  I+   +    
Sbjct: 119 AQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDD 178

Query: 282 SIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            I+ N +++MY K   +D A +VFERM  K+ ++WNT+    S +    +  +L  +  L
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDL 238

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RPN +T   ++  C  +  +  G  +  +    G   +  V ++L+ ++ +CG +  
Sbjct: 239 DGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRA 298

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A    + +  ++  +W  LL+ Y  +      +     +   GV+++  TF  ++E+C  
Sbjct: 299 ARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVA 358

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGA 519
                +  +IH  + ++G      + ++L+  Y   G  D +   F   ++  D+  W A
Sbjct: 359 IAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNA 418

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +++A V +    E + IF  +   G  PD     +IL++CA++ A    +  H  +++ G
Sbjct: 419 LLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERG 478

Query: 580 FNTEVYVASA------VIDAYAKCGDIKGARMAFDQS--FNSNDVIVYNTLIMAYAHHGL 631
                 VASA      VI+ YAKCG +  A+  F ++    ++DV+ ++ ++ AY+  GL
Sbjct: 479 LFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGL 538

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             EA+  F  M+   ++P   +FVS ++ CSH GLV +    F S+   +G+ P+   + 
Sbjct: 539 SEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFA 598

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           CLVD+LSR G++ +A+ ++   P     + + +LLS CR +G+ E
Sbjct: 599 CLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLE 643



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 203/433 (46%), Gaps = 11/433 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWG 98
           ++ + I     L    ++++  LG  +H  IV  G   +D+ L N ++ MY KCG     
Sbjct: 139 VKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLA 198

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF+ M  +N V+W  +++A  ++  +     +  +M  +G  PN+  + SV+  C  M
Sbjct: 199 REVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWM 258

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +   G  +H       +E +  V  +++N Y K G + AA      I + D   W  ++
Sbjct: 259 QSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLL 318

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA  G+G  A+ V+  M  EG+ +D +TF+N L+ C  +A   +G +IH  +  S +E
Sbjct: 319 AAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIE 378

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
               +  AL+DMY K    D A + F+RM+D +DV  WN L   +       +T  +F +
Sbjct: 379 LDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFAR 438

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV------TSSLIYM 391
             L G  P+ VTF  +L  C  L  L LG       L  G  D + V      T+S+I M
Sbjct: 439 MSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINM 498

Query: 392 FCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + +CG++  A + F         ++  W+ +++ Y       + L+ F ++ + GV+ + 
Sbjct: 499 YAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDS 558

Query: 449 CTFFYVVETCCRS 461
            +F   +  C  S
Sbjct: 559 VSFVSAIAGCSHS 571



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/501 (25%), Positives = 231/501 (46%), Gaps = 11/501 (2%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           G  +D+ +   ++ MY++CG      R FD M  RN+VSW+ +++A  Q G     L+++
Sbjct: 72  GLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELF 131

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAK 192
           V M   G   N     SV+  C SM A   G SIH        +  +  +G +++N Y K
Sbjct: 132 VRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGK 191

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
            G+V  A  VF  + + +   WN MI   +      EA  ++  M  +G+  +K T ++ 
Sbjct: 192 CGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSV 251

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           +  C+ +     GR +H ++    +E   ++ NAL+++Y K   +  A    E +  +D 
Sbjct: 252 IDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDK 311

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ISW TL   ++ + +  +  ++  +    G + +  TF  LL  C  +  L LG ++   
Sbjct: 312 ISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDR 371

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDAD 431
               G   +  + ++L+ M+ +CG  + A   FD +S  +++T WN LL+ Y       +
Sbjct: 372 LAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKE 431

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF------SSCGYI 485
            L  F  +   GV  +  TF  +++ C       +    H  +++ G       +S   +
Sbjct: 432 TLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLL 491

Query: 486 CSSLIKSYVNFGQL-DNSFEFSNG--AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            +S+I  Y   G L D   EF+    A   D+ +W AM++A    G + EA+  F+S+ +
Sbjct: 492 TTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQ 551

Query: 543 AGEKPDEYILGTILNSCAAIG 563
            G KPD     + +  C+  G
Sbjct: 552 EGVKPDSVSFVSAIAGCSHSG 572


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 180/673 (26%), Positives = 327/673 (48%), Gaps = 9/673 (1%)

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           A   + S+  I++     G     L  Y  M       + +   S++K C S+     G 
Sbjct: 30  ASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGL 89

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           S+H   L   +  + ++  S++NFYAK G    A +VF  +   +V  W ++IG Y+  G
Sbjct: 90  SLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTG 149

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              EA ++   M  +GI     T ++ L G S +A       +HG  I       I++ N
Sbjct: 150 RVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQC---LHGSAILYGFMSDINLSN 206

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +++ MY K   ++Y+ K+F+ M  +D++SWN+L   +++     +   L     + G  P
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEP 266

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  TF  +L       +L LG  L    L   F  + +V +SLI M+ + G +++A  +F
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMF 326

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           +    K++  W  ++SG   N      L  F  + + GV+ +  T   V+  C +  +  
Sbjct: 327 ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYN 386

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
           +   +HG + +          +SL+  +   G LD S    +   + ++ SW AM++   
Sbjct: 387 LGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYA 446

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G+  +A+ +F+ +    + PD   + ++L  CA+ G     K IH FVI+ G    + 
Sbjct: 447 QNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCIL 506

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V ++++D Y KCGD+  A+  F+Q   S+D++ ++ +I+ Y +HG    A+  + K   +
Sbjct: 507 VDTSLVDMYCKCGDLDIAQRCFNQ-MPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLES 565

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P+   F+SV+S+CSH GLV++G  +++SM   +G+ P+ + + C+VD+LSR G +E+
Sbjct: 566 GMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEE 625

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN-----DAAHVLLS 760
           A ++ +     P   V   +L  CR +GN ELG+  +  +L+L P +       AH   S
Sbjct: 626 AYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCYAS 685

Query: 761 KRKRQREGNLLDH 773
             K +  G    H
Sbjct: 686 INKWEEVGEAWTH 698



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 136/554 (24%), Positives = 265/554 (47%), Gaps = 8/554 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  +H  I+  G + D ++ ++LI  Y+K G+     +VFD M ERN+V WT I+    
Sbjct: 87  LGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYS 146

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKN 179
           + G       ++ +M+  G  P+     SV  + +  G SE  +   +H  A+      +
Sbjct: 147 RTGRVPEAFSLFDEMRRQGIQPS-----SVTMLSLLFGVSELAHVQCLHGSAILYGFMSD 201

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +  S+L+ Y K  ++  + ++F  +   D+  WN+++  YA  GY  E L ++ +M  
Sbjct: 202 INLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRI 261

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G   D  TF + L   +   +  +GR +HG I+R+  +    +  +LI MY+K   +D 
Sbjct: 262 QGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDI 321

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           AF++FER  DKDV+ W  +  G  +N +  +  ++F + +  G + +  T + ++  C +
Sbjct: 322 AFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQ 381

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L   +LG  +           +    +SL+ M  +CG ++ +  VFD ++ +N+ +WN +
Sbjct: 382 LGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAM 441

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N      L  F  +       +  T   +++ C  +    +   IH  +I+ G 
Sbjct: 442 ITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGL 501

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
             C  + +SL+  Y   G LD +    N     D+ SW A++    + G    A+  +  
Sbjct: 502 RPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSK 561

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCG 598
            +E+G KP+  I  ++L+SC+  G  ++  +I+  + +  G    +   + V+D  ++ G
Sbjct: 562 FLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAG 621

Query: 599 DIKGARMAFDQSFN 612
            ++ A   + + F+
Sbjct: 622 RVEEAYNLYKKKFS 635



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 267/535 (49%), Gaps = 12/535 (2%)

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
           S +S  +  +NA+I  ++  G   + L   +SML   +  D YTF + L+ CS +  F +
Sbjct: 28  SSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSL 87

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G  +H  I+ S +     I ++LI+ Y K    D A KVF+ M +++V+ W ++ G +S 
Sbjct: 88  GLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSR 147

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDE 381
                +  SLF +    G +P+ VT   LL    +L        +QCL   A+  GF+ +
Sbjct: 148 TGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSEL------AHVQCLHGSAILYGFMSD 201

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
            N+++S++ M+ +C  +E +  +FD +  +++ +WN L+S Y       +VL     +  
Sbjct: 202 INLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRI 261

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G E +  TF  V+         ++   +HG I++T F    ++ +SLI  Y+  G +D 
Sbjct: 262 QGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDI 321

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +F     +   D+  W AM+S LV  G   +A+ +F  +++ G K     + +++ +CA 
Sbjct: 322 AFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQ 381

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           +G+Y    S+H ++ +     ++   ++++  +AKCG +  + + FD+  N  +++ +N 
Sbjct: 382 LGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDK-MNKRNLVSWNA 440

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I  YA +G V +A+ +F++M+  +  P   T VS++  C+  G +  G  +  S   + 
Sbjct: 441 MITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWI-HSFVIRN 499

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           G++P       LVDM  + G L+ A+     MP       + +++ G   HG  E
Sbjct: 500 GLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSH-DLVSWSAIIVGYGYHGKGE 553



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 186/365 (50%), Gaps = 3/365 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP      LS++ +     LG  +HG I++  F  D  ++ +LI MY K G      R+F
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMF 326

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +   ++++V WT ++S  +QNG  D  L ++  M   G   +   + SV+  C  +G+  
Sbjct: 327 ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYN 386

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G S+H +  +  +  +     S++  +AK G +  +  VF  ++  ++  WNAMI GYA
Sbjct: 387 LGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYA 446

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             GY  +AL + + M  +  T D  T ++ LQGC+      +G+ IH  +IR+ +   I 
Sbjct: 447 QNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCIL 506

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH-KFILS 341
           +  +L+DMY K   +D A + F +M   D++SW+ +  G+  +   G+TA  F+ KF+ S
Sbjct: 507 VDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYH-GKGETALRFYSKFLES 565

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           G +PNHV F  +L  C     ++ GL + + +    G        + ++ +  R G VE 
Sbjct: 566 GMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRVEE 625

Query: 401 AHSVF 405
           A++++
Sbjct: 626 AYNLY 630


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 196/714 (27%), Positives = 349/714 (48%), Gaps = 43/714 (6%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
           + G Q+HG + KL +  D  + N LI+MY KC G  G+ LR FD++  +N VSW  I+S 
Sbjct: 121 LFGRQIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISV 180

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIE 177
             Q G+     KM+  M+ +G  P E+  GS++    S+   +      I C   K    
Sbjct: 181 YSQTGDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFL 240

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV---V 234
            + FVG  +++ +AK G +  A ++F  + + +    N ++ G     +G EA  +   +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300

Query: 235 SSMLFEGITMDKYT-FINALQGCSLVADFDI--GRQIHGLIIRSE-VECSISIVNALIDM 290
           +SM+   ++ + Y   +++    SL  +  +  GR++HG +I +  V+  + I N L++M
Sbjct: 301 NSMI--DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A +VF  M +KD +SWN++  G  +N    +    +         P   T 
Sbjct: 359 YAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTL 418

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
              +  C  L    LG Q+   +L  G     +V+++L+ ++   G +     +F ++  
Sbjct: 419 ISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPE 478

Query: 411 KNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +  +WN ++     +     + +  F N   +G ++N  TF  V+         ++  Q
Sbjct: 479 HDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQG 528
           IHG  +K   +      ++LI  Y   G++D   + FS  +ER D  +W +M+S  +H  
Sbjct: 539 IHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNE 598

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
              +A+ +   +++ G++ D ++  T+L++ A++   +R   +H   ++    ++V V S
Sbjct: 599 LLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANL 647
           A++D Y+KCG     R+ +   F       +NT              M +F  MKL    
Sbjct: 659 ALVDMYSKCG-----RLDYALRF-------FNT--------------MPLFANMKLDGQT 692

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P   TFV V+SACSH GL+++G   F+SM   YG+ P  + + C+ D+L R G L+  +
Sbjct: 693 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLE 752

Query: 708 HVIEIMPFQPSPTVYRSLLSG-CRIHGNK-ELGEWASEKLLLLLPKNDAAHVLL 759
             IE MP +P+  ++R++L   CR +G K ELG+ A+E L  L P+N   +VLL
Sbjct: 753 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 806



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 166/693 (23%), Positives = 304/693 (43%), Gaps = 22/693 (3%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  + K G   D++L NNLI  Y + G      +VFDEM  RN VSW  +VS   +NGE 
Sbjct: 24  HSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACVVSGYSRNGEH 83

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFVGC 184
              L    DM   G   N +A  S ++ C  + +    FG  IH    K+    +  V  
Sbjct: 84  KEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDAVVSN 143

Query: 185 SVLNFYAKLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++ Y K G  +  A R F  +   +   WN++I  Y+  G    A  +  SM  +G  
Sbjct: 144 VLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQCDGSR 203

Query: 244 MDKYTFINALQ-GCSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
             +YTF + +   CSL   D  +  QI   I +S     + + + L+  + KS  + +A 
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHAR 263

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF--ILSGSRPNHVTF--SILLRQC 357
           K+F +M  ++ ++ N L  G    K   +   LF     ++  S  ++V    S      
Sbjct: 264 KIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323

Query: 358 GKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            + + L  G ++    +  G +D    + + L+ M+ +CG++  A  VF  ++ K+  +W
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSW 383

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++G   N C  + ++ + ++    +     T    + +C   +  ++  QIHG  +K
Sbjct: 384 NSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLK 443

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN-HEAVT 535
            G      + ++L+  Y   G L+   +  +     D  SW +++ AL     +  EAV 
Sbjct: 444 LGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVA 503

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F + + AG+K +     ++L++ +++   +  K IH   +K     E    +A+I  Y 
Sbjct: 504 CFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYG 563

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG++ G    F +     D + +N++I  Y H+ L+++A+++   M     +     + 
Sbjct: 564 KCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYA 623

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           +V+SA +    +++G +   +   +  ++        LVDM S+ G L+ A      MP 
Sbjct: 624 TVLSAFASVATLERG-MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPL 682

Query: 716 ----------QPSPTVYRSLLSGCRIHGNKELG 738
                      P    +  +LS C   G  E G
Sbjct: 683 FANMKLDGQTPPDHVTFVGVLSACSHAGLLEEG 715



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/617 (23%), Positives = 270/617 (43%), Gaps = 46/617 (7%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   I K GF  D+F+ + L++ ++K G      ++F++M  RN V+   ++   ++  
Sbjct: 229 QIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQK 288

Query: 125 EFDMGLKMYVDMKTN-GFMPNEFAV--------GSVMKVCVSMGASEFGYSIHCFALKIR 175
             +   K+++DM +     P  + +            +V +  G    G+ I    +   
Sbjct: 289 WGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM 348

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +     +G  ++N YAK G +A A RVF  ++  D   WN+MI G        EA+    
Sbjct: 349 VG----IGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQ 404

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           SM    I    +T I+++  C+ +    +G+QIHG  ++  ++ ++S+ NAL+ +Y ++ 
Sbjct: 405 SMRRHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGF-SENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            ++   K+F  M + D +SWN++ G   S  ++  +  + F   + +G + N +TFS +L
Sbjct: 465 CLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVL 524

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNI 413
                L   +LG Q+  LAL     DE    ++LI  + +CG ++    +F  +S  ++ 
Sbjct: 525 SAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDD 584

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TWN ++SGY  N   A  L     + ++G  ++   +  V+         +   ++H  
Sbjct: 585 VTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHAC 644

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN-----------GAERLDMASWGAMMS 522
            ++    S   + S+L+  Y   G+LD +  F N           G    D  ++  ++S
Sbjct: 645 SVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPLFANMKLDGQTPPDHVTFVGVLS 704

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN--SCAA--IGAYQRTKSIHPFVIKL 578
           A  H G   E    F S+       D Y L   +   SC A  +G       +  F+ K+
Sbjct: 705 ACSHAGLLEEGFKHFESM------SDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKM 758

Query: 579 GFNTEVYVASAVIDA-------YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
                V +   V+ A        A+ G  K A M F       + + Y  L   YA  G 
Sbjct: 759 PMKPNVLIWRTVLGACCRANGRKAELGK-KAAEMLFQ--LEPENAVNYVLLGNMYAAGGR 815

Query: 632 VSEAMEIFDKMKLANLQ 648
             + ++   KMK A+++
Sbjct: 816 WEDLVKARKKMKDADVK 832



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 171/390 (43%), Gaps = 34/390 (8%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  S+S   +LK   LG Q+HG  +KLG   ++ + N L+ +Y++ G      ++F  M 
Sbjct: 418 LISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMP 477

Query: 107 ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           E + VSW  I+ A A         +  +++    G   N     SV+    S+   E G 
Sbjct: 478 EHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGK 537

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAH 223
            IH  ALK  I        +++  Y K G++   E++F  +S   DDV  WN+MI GY H
Sbjct: 538 QIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDV-TWNSMISGYIH 596

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                +AL++V  M+  G  +D + +   L   + VA  + G ++H   +R+ +E  + +
Sbjct: 597 NELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            +AL+DMY K   +DYA + F  M              F+  K  GQT            
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPL------------FANMKLDGQTP----------- 693

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            P+HVTF  +L  C     L+ G +  + ++   G        S +  +  R G ++   
Sbjct: 694 -PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLE 752

Query: 403 SVFDNVSYK-NITTWNELLSGYCFNCCDAD 431
              + +  K N+  W  +L      CC A+
Sbjct: 753 DFIEKMPMKPNVLIWRTVLGA----CCRAN 778



 Score = 42.7 bits (99), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           + + SC  IG     K  H  + K G   +VY+ + +I+AY + GD   AR  FD+    
Sbjct: 8   SFVQSC--IGHRGAAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDE-MPL 64

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            + + +  ++  Y+ +G   EA+     M    +  +   FVS + AC
Sbjct: 65  RNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRAC 112



 Score = 40.8 bits (94), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 12/116 (10%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS   ++ +   G +VH   V+    +D+ + + L+ MYSKCG   + LR
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675

Query: 101 VFDEM-----------AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPN 144
            F+ M              + V++  ++SA    G  + G K +  M  + G  P 
Sbjct: 676 FFNTMPLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR 731


>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
 gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
          Length = 571

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/553 (31%), Positives = 284/553 (51%), Gaps = 18/553 (3%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W AMI GYA  G    A+   + M    +  DK T++  L     + D + GR+IH  I 
Sbjct: 4   WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGA---IQDLEQGRRIHVRIQ 60

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            +  +  + + NAL+ MY   S +  A +VFE M  +DV+SW ++    +   +      
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF +  L G+RPN +T   LL  C    D D G  +   A   G   +  V ++++ M+ 
Sbjct: 121 LFRRMQLQGTRPNRITLLELLAWCD---DPDEGAAIHERAFASGLRSDVPVCNAILNMYA 177

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + G  E A  +F+ +  +N  +W  +++         D L+ F ++ + GVE +   F  
Sbjct: 178 KAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFIT 237

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERL 512
           V+  C  +   +    IHG II+ G  S   + +++I++Y   G L  ++  F    ER 
Sbjct: 238 VINACSSAATARW---IHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERR 294

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D  SW  M+SA    G     V +F  ++  G + +E  L T++N+CA   A +  + IH
Sbjct: 295 DHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWIH 354

Query: 573 PFVIKLGFNTE---VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             VI  G+  E     VA+A++D Y KCG ++ A   F +     DV+ + ++I A A +
Sbjct: 355 DCVI--GYQLERSSSMVATALLDMYGKCGSLEVAARIFGE-LEQPDVVSWTSIIAATAQN 411

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM--DSQYGMQPSP 687
           G  S A  +F  M+L  ++P   TFVSV++ACSH GLVD G      +  D + G++ + 
Sbjct: 412 GDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHREGIELTL 471

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           +  GC+VD+L+R G LE+A+ VI+ MPF+P+P V+ + L+GC+ + +   G+ A+ ++L 
Sbjct: 472 EHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKAYEDISRGQRAAAQILG 531

Query: 748 LLPKNDAAHVLLS 760
           L  K  AA + LS
Sbjct: 532 LDEKTTAAVIALS 544



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 8/398 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I + G+  D+ + N L+ MY+ C       RVF+ M  R++VSWT I++A  +
Sbjct: 52  GRRIHVRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANAR 111

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+F   + ++  M+  G  PN   +  ++  C      + G +IH  A    +  +  V
Sbjct: 112 AGDFPAAMGLFRRMQLQGTRPNRITLLELLAWCDD---PDEGAAIHERAFASGLRSDVPV 168

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++LN YAK G    A  +F  +   +   W AM+      G   +AL +   M  +G+
Sbjct: 169 CNAILNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGV 228

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D   FI  +  CS  A     R IHG IIR   +   ++ NA+I  Y +   +  A++
Sbjct: 229 EPDSIAFITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYR 285

Query: 303 VFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            F  + + +D +SW T+   F+E     +   LF + +L G R N VT   ++  C    
Sbjct: 286 TFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGAS 345

Query: 362 DLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +  G  +  C+  +        V ++L+ M+ +CG++E+A  +F  +   ++ +W  ++
Sbjct: 346 AIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSII 405

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +    N   +   + FC +   GV     TF  VV  C
Sbjct: 406 AATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAAC 443



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 27/375 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H      G  +D+ + N ++ MY+K G F     +F+ M  RN VSWT +++A ++
Sbjct: 150 GAAIHERAFASGLRSDVPVCNAILNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVR 209

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  D  L+++ DM+ +G  P+  A  +V+  C S   + +   IH   ++   + +  V
Sbjct: 210 AGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSAATARW---IHGCIIRGGCDSDTAV 266

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             +++  YA+ G +  A R F  I    D   W  MI  +A  G     + +   ML EG
Sbjct: 267 SNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEG 326

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYA 300
           +  ++ T I  +  C+  +    GR IH  +I  ++E S S+V  AL+DMY K   ++ A
Sbjct: 327 VRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSLEVA 386

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F  +   DV+SW ++    ++N +    A LF    L G RP  VTF  ++  C   
Sbjct: 387 ARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHA 446

Query: 361 LDLDLGLQ------------LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
             +DLG +            ++    HCG          ++ +  R G +E A  V D++
Sbjct: 447 GLVDLGKEFVTRLRKDHREGIELTLEHCG---------CIVDLLARAGRLEEAECVIDSM 497

Query: 409 SYKNI-TTWNELLSG 422
            +K     W   L+G
Sbjct: 498 PFKPTPAVWMAFLAG 512



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/428 (21%), Positives = 204/428 (47%), Gaps = 20/428 (4%)

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V+ W  +  G++++ +  +    F +   +   P+ +T+  +L   G + DL+ G ++  
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVL---GAIQDLEQGRRIHV 57

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
                G+  +  V ++L+ M+  C ++  A  VF+ + ++++ +W  +++          
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            +  F  +   G   N  T   ++  C   ++      IH     +G  S   +C++++ 
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELLAWC---DDPDEGAAIHERAFASGLRSDVPVCNAILN 174

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G+ + + E        +  SW AMM+A+V  G + +A+ +F  + + G +PD   
Sbjct: 175 MYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIA 234

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
             T++N+C++       + IH  +I+ G +++  V++A+I AYA+CG +K A   F +  
Sbjct: 235 FITVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIK 291

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG- 670
              D + + T+I A+A  G +   +++F +M L  ++ ++ T ++V++AC+    + +G 
Sbjct: 292 ERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGR 351

Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
               C++   ++    M  +      L+DM  + G LE A  +   +  QP    + S++
Sbjct: 352 WIHDCVIGYQLERSSSMVAT-----ALLDMYGKCGSLEVAARIFGELE-QPDVVSWTSII 405

Query: 727 SGCRIHGN 734
           +    +G+
Sbjct: 406 AATAQNGD 413



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/507 (20%), Positives = 212/507 (41%), Gaps = 20/507 (3%)

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +V WT +++   ++G+F   ++ + +M+ N  +P++    +V+     +   E G  IH 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDL---EQGRRIHV 57

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
              +   + +  V  +++  YA    +A A RVF ++   DV  W ++I   A  G    
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           A+ +   M  +G   ++ T +  L  C    D D G  IH     S +   + + NA+++
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELLAWCD---DPDEGAAIHERAFASGLRSDVPVCNAILN 174

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K+   + A ++FERM  ++ +SW  +               LF      G  P+ + 
Sbjct: 175 MYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIA 234

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV- 408
           F  ++  C           +    +  G   +  V++++I  + RCG+++ A+  F  + 
Sbjct: 235 FITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIK 291

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +W  ++S +         ++ F  +   GV  N  T   VV  C  +   +   
Sbjct: 292 ERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGR 351

Query: 469 QIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            IH  +I      S   + ++L+  Y   G L+ +       E+ D+ SW ++++A    
Sbjct: 352 WIHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQN 411

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL------GFN 581
           G    A  +F ++   G +P +    +++ +C+  G     K    FV +L      G  
Sbjct: 412 GDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGLVDLGKE---FVTRLRKDHREGIE 468

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFD 608
             +     ++D  A+ G ++ A    D
Sbjct: 469 LTLEHCGCIVDLLARAGRLEEAECVID 495


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 160/553 (28%), Positives = 293/553 (52%), Gaps = 10/553 (1%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +V  W +++ GY   G    AL + + M+  G+  + +    AL  C+ +     G Q+H
Sbjct: 5   NVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVH 64

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            L +R+       I + LI+MY +   +  A +VF+RM   DV+ + +L   F  N    
Sbjct: 65  SLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFE 124

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS-- 387
             A    + +  G +PN  T + +L  C ++L    G Q+    +    L  ++V SS  
Sbjct: 125 LAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTA 180

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI  + R G  ++A +VFD++  KN+ +W  ++  Y  +    + L+ F ++   GV+ N
Sbjct: 181 LIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPN 240

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
                 V+  C    +  +  Q+H + IK    +   + ++L+  Y   G ++      N
Sbjct: 241 EFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLN 297

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
             E  D+ SW   +SA    G   +A+ +   +   G  P+ Y   ++L+SCA + +  +
Sbjct: 298 KIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQ 357

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
               H   +KLG ++E+   +A+I+ Y+KCG +  AR+AFD   +++DV  +N+LI  +A
Sbjct: 358 GMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFD-VMHTHDVTSWNSLIHGHA 416

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG  ++A+E+F KM+   ++P  +TF+ V+  C+H G+V++G L F+ M  QY   P+P
Sbjct: 417 QHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAP 476

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
             Y C++DML RNG  ++A  +I  MPF+P   ++++LL+ C++H N ++G+ A+++L+ 
Sbjct: 477 SHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLME 536

Query: 748 LLPKNDAAHVLLS 760
           L  ++ A++VL+S
Sbjct: 537 LSDRDSASYVLMS 549



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 133/529 (25%), Positives = 240/529 (45%), Gaps = 12/529 (2%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  +N+V+WT ++S   +NG  +  L M+ DM  +G  PN+FA  + +  C  +GA   G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H  A++     + ++G  ++  Y++ G + AA+ VF  + S DV  + ++I  +   
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G    A   +  ML +G+  +++T    L  C  V    +G+QIHG +I+     S S+ 
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176

Query: 285 N--ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  ALID Y ++     A  VF+ +  K+V+SW ++   +  +    +   +F   I  G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             PN    SI+L  CG    + LG QL C A+    + +  V+++L+ M+ R G VE   
Sbjct: 237 VDPNEFALSIVLGACGS---IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           ++ + +   ++ +W   +S    N      +   C +   G   NG  F  V+ +C    
Sbjct: 294 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 353

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           +     Q H   +K G  S     ++LI  Y   GQ+ ++    +     D+ SW +++ 
Sbjct: 354 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 413

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFN 581
                G  ++A+ +F  +   G KPD+     +L  C   G  +  +     +I +  F 
Sbjct: 414 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFT 473

Query: 582 TEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHH 629
                 + +ID   + G    A RM  D  F   D +++ TL+ +   H
Sbjct: 474 PAPSHYACMIDMLGRNGRFDEALRMINDMPFEP-DALIWKTLLASCKLH 521



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 199/400 (49%), Gaps = 7/400 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + LI MYS+CG       VFD M   ++V +T ++SA  +
Sbjct: 60  GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 119

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS-MGASEFGYSIHCFALKIRIEKNPF 181
           NGEF++  +  + M   G  PNE  + +++  C   +G    GY I    L+    ++ +
Sbjct: 120 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLR---SQSVY 176

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ G+   A+ VF S+   +V  W +M+  Y   G   EAL V   M+ EG
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +++     L  C  +    +GRQ+H   I+ ++   I + NAL+ MY ++  ++   
Sbjct: 237 VDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELE 293

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +  ++ + D++SW T      +N    +  +L  +    G  PN   FS +L  C  + 
Sbjct: 294 AMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 353

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G+Q  CLAL  G   E    ++LI M+ +CG +  A   FD +   ++T+WN L+ 
Sbjct: 354 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 413

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           G+  +      L+ F  +  +G++ +  TF  V+  C  S
Sbjct: 414 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHS 453



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 60  RVLGTQVHGHIVK-LGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           RVLG Q+HG+++K +G  +  ++    LI  YS+ G F     VFD +  +N+VSW  ++
Sbjct: 154 RVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMM 213

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
              I++G  +  L+++ DM + G  PNEFA+  V+  C S+G    G  +HC A+K  + 
Sbjct: 214 QLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLI 270

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V  ++L+ Y + G V   E +   I + D+  W   I      G+G +A+ ++  M
Sbjct: 271 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 330

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG T + Y F + L  C+ VA  D G Q H L ++   +  I   NALI+MY K   M
Sbjct: 331 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 390

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A   F+ M   DV SWN+L  G +++ +  +   +F K   +G +P+  TF  +L  C
Sbjct: 391 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGC 450

Query: 358 GKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITT 415
                ++ G L  + +     F    +  + +I M  R G  + A  + +++ ++ +   
Sbjct: 451 NHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALI 510

Query: 416 WNELLS 421
           W  LL+
Sbjct: 511 WKTLLA 516



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G       + +++   +LVSWT  +SA  
Sbjct: 256 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 315

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + +   M + GF PN +A  SV+  C  + + + G   HC ALK+  +    
Sbjct: 316 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 375

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G+A  G   +AL V S M   G
Sbjct: 376 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 435

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYA 300
           I  D  TF+  L GC+     + G     L+I +     + S    +IDM  ++   D A
Sbjct: 436 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 495

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++   M  + D + W TL      ++N
Sbjct: 496 LRMINDMPFEPDALIWKTLLASCKLHRN 523



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 114/290 (39%), Gaps = 38/290 (13%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           K I  LC   Q  S+ F      F +  LS   ++ S   G Q H   +KLG  ++I   
Sbjct: 322 KAIALLC---QMHSEGFTPNGYAF-SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 377

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI MYSKCG  G     FD M   ++ SW  ++    Q+G+ +  L+++  M++NG  
Sbjct: 378 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 437

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P++     V+  C   G  E G       L  R+  + +      + YA           
Sbjct: 438 PDDSTFLGVLMGCNHSGMVEEG------ELFFRLMIDQYSFTPAPSHYA----------- 480

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
                         MI      G   EAL +++ M FE    D   +   L  C L  + 
Sbjct: 481 -------------CMIDMLGRNGRFDEALRMINDMPFEP---DALIWKTLLASCKLHRNL 524

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           DIG+     ++      S S V  + ++Y      + A KV  RM +  V
Sbjct: 525 DIGKLAADRLMELSDRDSASYV-LMSNIYAMHGEWEDARKVRRRMDETGV 573


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  286 bits (731), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 160/510 (31%), Positives = 265/510 (51%), Gaps = 6/510 (1%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID--MYIKSSGMDYAFKVFERMADK 310
           LQ C    D    +Q+H  ++++       I  A+++    +    +DYA  +F  +   
Sbjct: 28  LQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKP 84

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +  ++N +  G +  ++P     LF K      + +  TFS +L+ C ++  L  G Q+ 
Sbjct: 85  ESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVH 144

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            L L  GF   E V ++LI M+  CG + +A  VFD +  ++I  WN +LSGY  N    
Sbjct: 145 ALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWD 204

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           +V+K F  I E  +E +  T   V+  C R  N ++   I   I+  G      + +SLI
Sbjct: 205 EVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLI 264

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   GQ+D + +  +  ++ D+ +W AM+S         EA+ +FH + +    P+E 
Sbjct: 265 DMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEV 324

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            + ++L SCA +GAY+  K +H ++ K      V + + +ID YAKCG I  +   F + 
Sbjct: 325 TMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF-KE 383

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            +  +V  +  LI   A++G    A+E F  M   +++P+  TF+ V+SACSH  LVD+G
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
             LF SM   + ++P  + YGC+VD+L R G+LE+A   I+ MPF P+  V+R+LL+ CR
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            H N E+ E + E +  L P +   ++LLS
Sbjct: 504 AHKNIEMAEKSLEHITRLEPAHSGDYILLS 533



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 190/386 (49%), Gaps = 4/386 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D    +  L     +K+   G QVH  I+K GF ++ F++N LI MY+ CG  G   
Sbjct: 117 VQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVAR 176

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD M ER++V+W  ++S   +NG +D  +K++  +       ++  + SV+  C  + 
Sbjct: 177 HVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLA 236

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  I  + +   + +N  +  S+++ YAK G V  A ++F  +   DV  W+AMI 
Sbjct: 237 NLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMIS 296

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA      EALN+   M    +  ++ T ++ L  C+++  ++ G+ +H  I + +++ 
Sbjct: 297 GYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKL 356

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++++   LID Y K   +D + +VF+ M+ K+V +W  L  G + N         F   +
Sbjct: 357 TVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSML 416

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGA 397
            +  +PN VTF  +L  C     +D G  L   ++   F  E  +     ++ +  R G 
Sbjct: 417 ENDVKPNDVTFIGVLSACSHACLVDQGRHL-FNSMRRDFDIEPRIEHYGCMVDILGRAGF 475

Query: 398 VEMAHSVFDNVSY-KNITTWNELLSG 422
           +E A+   DN+ +  N   W  LL+ 
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLAS 501



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 185/424 (43%), Gaps = 10/424 (2%)

Query: 45  IFLAKSLSLSENLKSRVLGT--------QVHGHIVKLGFTNDIFLQNNLI--AMYSKCGY 94
           I L       EN KS +L          QVH H++K     D  +   ++  A       
Sbjct: 11  ISLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDT 70

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
             + L +F+ + +    ++ +++         D  L ++  M       ++F   SV+K 
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C  M A   G  +H   LK   + N FV  +++  YA  G +  A  VF  +    +  W
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N+M+ GY   G   E + +   +L   I  D  T I+ L  C  +A+ +IG  I   I+ 
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +  + ++  +LIDMY K   +D A K+F+ M  +DV++W+ +  G+++     +  +L
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNL 310

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           FH+       PN VT   +L  C  L   + G  +              + + LI  + +
Sbjct: 311 FHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAK 370

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG ++ +  VF  +S+KN+ TW  L+ G   N      L+ F ++ E+ V+ N  TF  V
Sbjct: 371 CGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGV 430

Query: 455 VETC 458
           +  C
Sbjct: 431 LSAC 434



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +  +IV  G   +  L  +LI MY+KCG      ++FDEM +R++V+W+ ++S   
Sbjct: 240 IGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYA 299

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q       L ++ +M+     PNE  + SV+  C  +GA E G  +H +  K +++    
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVT 359

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G  +++FYAK G +  +  VF  +S  +V  W A+I G A+ G G  AL   SSML   
Sbjct: 360 LGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLEND 419

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYA 300
           +  +  TFI  L  CS     D GR +   + R  ++E  I     ++D+  ++  ++ A
Sbjct: 420 VKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEA 479

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
           ++  + M    + + W TL      +KN
Sbjct: 480 YQFIDNMPFPPNAVVWRTLLASCRAHKN 507


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  286 bits (731), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 194/682 (28%), Positives = 321/682 (47%), Gaps = 13/682 (1%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV-GSVMKVCVSMGASEFGYSIHCFALKI 174
           ++    ++G F+  +++Y+D    GF   EF     ++K    +     G  IH   LK 
Sbjct: 9   MIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKF 68

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
              ++ FV  S+L  Y K G    A  +F  +   D   WN MI G+   G   ++L + 
Sbjct: 69  GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMF 128

Query: 235 SSMLFE--GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
             M+ E  G   ++   + AL  C+ +     G +IHG +++  V+    +V+ALI+MY+
Sbjct: 129 RRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYM 188

Query: 293 KSSGMDYAFKVFERMADKDVIS-----WNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           K   +  A  VFER+ D +++      WN +  G+  N+       LF + +  G  P+ 
Sbjct: 189 KCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDS 248

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T  ++L  C +LLDL +G Q+  L L  G  D+  V ++L+ M+ +CG  E +  +F  
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR 308

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
               N+  W  ++     N    + L+ F          +       +  C     +   
Sbjct: 309 SQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRG 368

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             IHG  IK GF S  ++  +L+  Y   G ++ + +   G    D+ SW A++S     
Sbjct: 369 MAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQN 428

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               EA+  F  +     KP+   +  IL+ C  +      K +H ++++  F T   V 
Sbjct: 429 KCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVN 488

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +++I AYAKCGDI  +R  F++    N+V  +N++++ +  HG   E    F+KMK AN+
Sbjct: 489 NSLISAYAKCGDIHSSRTVFEKLPVRNEV-TWNSILLGFGMHGRTDEMFATFEKMKEANI 547

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P   TF S++S+CSH G VD G   F SM   Y ++P  + Y C+VD+L R G L  A 
Sbjct: 548 KPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAY 607

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQRE 767
            +I  MP  P   ++ SLL+ C+ HGN +L E  +  +  L   +    VLL+    +  
Sbjct: 608 DLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANL-YEDS 666

Query: 768 GNLLDHEGVCNVNDGIKTVDLK 789
           GNL +   V  V   IK + LK
Sbjct: 667 GNLNE---VFRVRTDIKQMGLK 685



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 153/576 (26%), Positives = 275/576 (47%), Gaps = 8/576 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HGH++K GF  DIF++N+L+ MY KCG  G  + +F+ M ER+ VSW  ++S   Q
Sbjct: 58  GKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQ 117

Query: 123 NGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +G++   L M+  M  +  G   N  A  + +  C S+     G  IH F +K  ++ + 
Sbjct: 118 SGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDE 177

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDV-----GCWNAMIGGYAHCGYGFEALNVVS 235
           F+  +++  Y K GD+  AE VF  I  +++       WN MI GY        AL +  
Sbjct: 178 FLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFV 237

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            ML  GI+ D  T +  L  CS + D  +G+QIHGLI+   ++  + +  AL++MY K  
Sbjct: 238 EMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCG 297

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
             + + ++F+R  + +++ W ++    ++N  P +    F +F+L    P+ V     LR
Sbjct: 298 DPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALR 357

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L     G+ +   A+  GF  +  V  +L+  + +CG +E A  VF  +S +++ +
Sbjct: 358 ACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVS 417

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN L+SG+  N C  + LK F ++    ++ N  T   ++  C       +  ++H  ++
Sbjct: 418 WNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLL 477

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           +  F +   + +SLI +Y   G + +S          +  +W +++      G   E   
Sbjct: 478 RHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFA 537

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAY 594
            F  + EA  KPD     ++L+SC+  G      K  +  +        V   + ++D  
Sbjct: 538 TFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLL 597

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            + G++  A         S D  ++ +L+ +  +HG
Sbjct: 598 GRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHG 633



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 245/534 (45%), Gaps = 38/534 (7%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-----E 104
           +LS   ++K    G ++HG +VK G  +D FL + LI MY KCG       VF+     E
Sbjct: 148 ALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNE 207

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  RN+  W +++   + N    + L+++V+M   G  P+   V  V+ +C  +     G
Sbjct: 208 LVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVG 267

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   L + ++ +  VG +++  Y K GD   + ++F    + ++  W +++   A  
Sbjct: 268 KQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQN 327

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY  EAL   S  + +    D    + AL+ CS ++    G  IHG  I+   +  + + 
Sbjct: 328 GYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVG 387

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+D Y K   M+YA +VF  ++ +D++SWN L  GF++NK   +    F        +
Sbjct: 388 GALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIK 447

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT + +L  C  L  + L  ++ C  L   F     V +SLI  + +CG +  + +V
Sbjct: 448 PNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTV 507

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  +N  TWN +L G+  +    ++  TF  + E+ ++ +  TF  ++ +C      
Sbjct: 508 FEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCS----- 562

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                 H   +  G+             Y N    D + E      R++   +  M+  L
Sbjct: 563 ------HSGKVDAGW------------KYFNSMMEDYNLE-----PRVE--QYTCMVDLL 597

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
              G+ ++A  +  S+  +   PD+ I G++L SC   G  +  + +   + +L
Sbjct: 598 GRAGNLNQAYDLIMSMPCS---PDDRIWGSLLASCKNHGNTKLAEVVANHIFEL 648



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 5/291 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DP+ L  +L     L  +  G  +HG  +K+GF +D+F+   L+  Y KCG   +  +VF
Sbjct: 348 DPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVF 407

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             ++ R+LVSW  ++S   QN   D  LK + DM++    PN   +  ++ VC  +    
Sbjct: 408 YGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMI 467

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               +HC+ L+   E N  V  S+++ YAK GD+ ++  VF  +   +   WN+++ G+ 
Sbjct: 468 LCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFG 527

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSI 281
             G   E       M    I  D  TF + L  CS     D G +  + ++    +E  +
Sbjct: 528 MHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRV 587

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQT 331
                ++D+  ++  ++ A+ +   M    D   W +L    +  KN G T
Sbjct: 588 EQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSL---LASCKNHGNT 635



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 11/207 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +A  LS+  +L   +L  +VH ++++  F  +  + N+LI+ Y+KCG      
Sbjct: 446 IKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSR 505

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+++  RN V+W  I+     +G  D     +  MK     P+     S++  C   G
Sbjct: 506 TVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSG 565

Query: 160 ASEFGYS-----IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
             + G+      +  + L+ R+E+       +++   + G++  A  +  S+  S D   
Sbjct: 566 KVDAGWKYFNSMMEDYNLEPRVEQYT----CMVDLLGRAGNLNQAYDLIMSMPCSPDDRI 621

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFE 240
           W +++    + G   +   VV++ +FE
Sbjct: 622 WGSLLASCKNHG-NTKLAEVVANHIFE 647


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 172/577 (29%), Positives = 292/577 (50%), Gaps = 7/577 (1%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI--TMDKY 247
           YA  G +A A ++F  +    +  +N +I  Y   G   +A+NV   M+ EGI    D Y
Sbjct: 59  YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGY 118

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T+    +    +    +G  IHG I+RS       + NAL+ MY+    ++ A  VF+ M
Sbjct: 119 TYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            ++DVISWNT+  G+  N        +F   +  G  P+H T   +L  CG L  L++G 
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +  L       D+  V ++L+ M+ +CG ++ A  VF  +  +++ TW  +++GY  + 
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG 298

Query: 428 CDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
            D +     C + +  GV  N  T   +V  C  +        +HG  I+    S   I 
Sbjct: 299 -DVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIE 357

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SLI  Y     +D  F   +GA R     W A+++  V      +A+ +F  +     +
Sbjct: 358 TSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVE 417

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P+   L ++L + A +   ++T +IH ++ K GF + +  A+ ++  Y+KCG ++ A   
Sbjct: 418 PNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477

Query: 607 FD---QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           F+   +   S DV+++  LI  Y  HG    A+++F +M  + + P++ TF S ++ACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G  LF  M   Y      + Y C+VD+L R G L++A ++I  +PF+P+ T++ 
Sbjct: 538 SGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWG 597

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ C  H N +LGE A+ KL  L P+N   +VLL+
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 266/572 (46%), Gaps = 24/572 (4%)

Query: 48  AKSLSLSENLKSRVL-GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            +S+S ++ L   V+ G +V GHI+           + L   Y+ CG+  +  ++FDEM 
Sbjct: 28  TQSISKTKALHCHVITGGRVSGHIL-----------STLSVTYALCGHIAYARKLFDEMP 76

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFG 164
           + +L+S+ +++   +++G +   + +++ M + G   +P+ +    V K    + +   G
Sbjct: 77  QSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLG 136

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   L+     + +V  ++L  Y   G V  A  VF  + + DV  WN MI GY   
Sbjct: 137 LVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRN 196

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY  +AL +   M+ EG+  D  T ++ L  C  +   ++GR +H L+    +   I + 
Sbjct: 197 GYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVK 256

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NAL++MY+K   MD A  VF RM  +DVI+W  +  G+ E+ +      L       G R
Sbjct: 257 NALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVR 316

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT + L+  CG  L L+ G  L   A+      +  + +SLI M+ +C  +++   V
Sbjct: 317 PNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRV 376

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F   S  +   W+ +++G   N    D L  F  +    VE N  T   ++       + 
Sbjct: 377 FSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADL 436

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER----LDMASWGAM 520
           +    IH  + KTGF S     + L+  Y   G L+++ +  NG +      D+  WGA+
Sbjct: 437 RQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G  H A+ +F  +V +G  P+E    + LN+C+  G  +   ++  F++    
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFML---- 552

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
             E Y   A  + Y    D+ G     D+++N
Sbjct: 553 --EHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 241/547 (44%), Gaps = 16/547 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+AK+   +  LKS  LG  +HG I++  F  D ++QN L+AMY   G       VFD M
Sbjct: 122 FVAKA---AGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVM 178

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R+++SW  ++S   +NG  +  L M+  M   G  P+   + S++ VC  +   E G 
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H    + R+     V  +++N Y K G +  A  VF  +   DV  W  MI GY   G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG 298

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               AL +   M FEG+  +  T  + +  C      + G+ +HG  IR +V   I I  
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIET 358

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +LI MY K   +D  F+VF   +      W+ +  G  +N+       LF +       P
Sbjct: 359 SLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEP 418

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T + LL     L DL   + + C     GF+   +  + L++++ +CG +E AH +F
Sbjct: 419 NIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478

Query: 406 DNVS----YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + +      K++  W  L+SGY  +    + L+ F  +  SGV  N  TF   +  C  S
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538

Query: 462 ---ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-W 517
              E    +        KT   S  Y C  ++      G+LD ++           ++ W
Sbjct: 539 GLVEEGLTLFSFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTIW 596

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           GA+++A V   +        + L E   E    Y+L  + N  AA+G ++  + +   + 
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVL--LANIYAALGRWKDMEKVRNMME 654

Query: 577 KLGFNTE 583
            +G   +
Sbjct: 655 NVGLRKK 661



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 178/386 (46%), Gaps = 6/386 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   +   L +  +LK   +G  VH  + +    + I ++N L+ MY KCG       VF
Sbjct: 217 DHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R++++WT +++  I++G+ +  L++   M+  G  PN   + S++  C       
Sbjct: 277 GRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLN 336

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H +A++ ++  +  +  S+++ YAK   +    RVF   S +  G W+A+I G  
Sbjct: 337 DGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCV 396

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 +AL++   M  E +  +  T  + L   + +AD      IH  + ++    S+ 
Sbjct: 397 QNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLD 456

Query: 283 IVNALIDMYIKSSGMDYAFKVF----ERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               L+ +Y K   ++ A K+F    E+   KDV+ W  L  G+  + +      +F + 
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGA 397
           + SG  PN +TF+  L  C     ++ GL L    L H   L   N  + ++ +  R G 
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGR 576

Query: 398 VEMAHSVFDNVSYKNITT-WNELLSG 422
           ++ A+++   + ++  +T W  LL+ 
Sbjct: 577 LDEAYNLITTIPFEPTSTIWGALLAA 602



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++LN  AA  +  +TK++H  VI  G     ++ S +   YA CG I  AR  FD+   S
Sbjct: 20  SLLNHYAATQSISKTKALHCHVIT-GGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQS 78

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ--PSQATFVSVMSACSHKGLVDKGC 671
           + ++ YN +I  Y   GL  +A+ +F +M    ++  P   T+  V  A      +  G 
Sbjct: 79  S-LLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137

Query: 672 LLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           ++  + + S +GM         L+ M    G +E A++V ++M
Sbjct: 138 VIHGRILRSWFGMDKY--VQNALLAMYMNFGRVEMARNVFDVM 178


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 178/647 (27%), Positives = 329/647 (50%), Gaps = 40/647 (6%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++++    G  +   ++H   LK+  E++ F+G ++++ Y KLG V  A++VF  +S  +
Sbjct: 103 LLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPN 160

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + A+I G++   +  EA+ +  +ML  GI  ++YTF+  L  C    D+ +G Q+HG
Sbjct: 161 VVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHG 220

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           ++++  +   + I NAL+ +Y K   +D   ++FE M ++D+ SWNT+     +     +
Sbjct: 221 IVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDE 280

Query: 331 TASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               F    L  G + +H + S LL  C   +    G QL  LAL  G     +V+SSLI
Sbjct: 281 AFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLI 340

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADV---------------- 432
             + +CG+      +F+ +  +++ TW  +++ Y  F   D+ V                
Sbjct: 341 GFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNA 400

Query: 433 --------------LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
                         L+ F  + E GVE++ CT   ++  C   ++ ++  QI G ++K G
Sbjct: 401 VLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFG 460

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFE--FSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             S   I ++L+  Y   G+++++ +  +    E    A   +M+      G  +EA+++
Sbjct: 461 ILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISL 520

Query: 537 FHS-LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           FHS   E     DE +  +IL+ C +IG ++    +H   +K G  TE  V +A +  Y+
Sbjct: 521 FHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYS 580

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC ++  A   F+ + N  D++ +N L+  +  H    +A+ I+ KM+ A ++P   TF 
Sbjct: 581 KCWNMDDAVRVFN-TMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFA 639

Query: 656 SVMSACSHK--GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            ++SA  H    LVD    LF SM++++ ++P+ + Y   + +L R G LE+A+  I  M
Sbjct: 640 LIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNM 699

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P +P   V+R+LL+ CRI+ N+ L + A+  +L + PK+  +++L S
Sbjct: 700 PLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDPLSYILKS 746



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 248/576 (43%), Gaps = 57/576 (9%)

Query: 43  DPIFLAKSLSLSEN----------LKSRV----LGTQVHGHIVKLGFTNDIFLQNNLIAM 88
           +P+F ++SL+ S +          L +R     L   VH   +KL    DIFL N LI+ 
Sbjct: 82  EPLFASRSLNTSLSTIASPFDLLRLSTRYGDPDLARAVHAQFLKL--EEDIFLGNALISA 139

Query: 89  YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
           Y K G      +VF  ++  N+VS+T ++S   ++   D  ++++  M  +G  PNE+  
Sbjct: 140 YLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTF 199

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            +++  C+     + G  +H   +K+ +    F+  +++  Y K G +    R+F  +  
Sbjct: 200 VAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLDLVLRLFEEMPE 259

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQ 267
            D+  WN +I          EA +    M L +G+ +D ++    L  C+       G+Q
Sbjct: 260 RDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQ 319

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKS---------------------SGM--------- 297
           +H L ++  +E  +S+ ++LI  Y K                      +GM         
Sbjct: 320 LHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGM 379

Query: 298 -DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            D A +VF +M  ++ IS+N +  G S N +  +   LF + +  G   +  T + ++  
Sbjct: 380 LDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITA 439

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT- 415
           CG L    +  Q+Q   +  G L    + ++L+ M+ RCG +E A  +F   S +N  T 
Sbjct: 440 CGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTA 499

Query: 416 -WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN-QQMVGQIHGA 473
               ++ GY  N    + +  F +    G  V        + + C S    +M  Q+H  
Sbjct: 500 MLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCH 559

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K+G  +   + ++ +  Y     +D++    N     D+ SW  +++  V      +A
Sbjct: 560 ALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKA 619

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           + I+  + +AG KPD      I      I AY+ T+
Sbjct: 620 LGIWKKMEKAGIKPDSITFALI------ISAYKHTE 649



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 44/400 (11%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG--------------------------YFG 96
           G Q+H   +K+G  + + + ++LI  Y+KCG                          Y  
Sbjct: 317 GQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYME 376

Query: 97  WGL-----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           +G+      VF++M +RN +S+  +++   +N +    L+++++M   G   ++  + S+
Sbjct: 377 FGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSI 436

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISSD 209
           +  C  + + +    I  F +K  I  N  +  ++++ Y + G +  AE++FY  S+ +D
Sbjct: 437 ITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEND 496

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQI 268
                 +MI GYA  G   EA+++  S   EG I MD+    + L  C  +   ++G Q+
Sbjct: 497 YTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQM 556

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H   ++S +     + NA + MY K   MD A +VF  M  +D++SWN L  G   +   
Sbjct: 557 HCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQG 616

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   ++ K   +G +P+ +TF++++         +L L   C +L      E N+  +L
Sbjct: 617 DKALGIWKKMEKAGIKPDSITFALII---SAYKHTELNLVDSCRSLFVSMETEHNIKPTL 673

Query: 389 ------IYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
                 I +  R G +E A     N+  + ++  W  LL+
Sbjct: 674 EHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLN 713



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +     LSL  ++    +G Q+H H +K G   +  + N  ++MYSKC      +RVF
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M  +++VSW  +V+  + + + D  L ++  M+  G  P+      ++    +   +E
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIIS---AYKHTE 649

Query: 163 FGYSIHCFALKIRIEKNPFVG------CSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
                 C +L + +E    +        S ++   + G +  AE+   ++    DV  W 
Sbjct: 650 LNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWR 709

Query: 216 AMI 218
           A++
Sbjct: 710 ALL 712


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 189/681 (27%), Positives = 328/681 (48%), Gaps = 41/681 (6%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R +G  +H   +K G  ND  L + LI MY+          VFD    ++LVS+  ++SA
Sbjct: 256 RDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISA 315

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            +Q+  +    +++  M      PN   V SV+  C        G S+H   +K+ + ++
Sbjct: 316 YMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEH 375

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++++ Y+KLG + ++  +F         C          C               
Sbjct: 376 VSVASALVSMYSKLGKLDSSLLLF---------CC---------C--------------- 402

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             +  D  T +N + GC    D  + + IH   +R++ E   S++NAL+ MY     +  
Sbjct: 403 --VAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDIST 460

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           +  +F++M  + +ISWNT+  GF+E  +      LF +      + + VT   L+     
Sbjct: 461 SHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSV 520

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             D  +G  +  LA+  G   + ++T++LI M+  CG VE    +FD+   +N  T+N L
Sbjct: 521 PGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNAL 580

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTG 478
           +SGY  N   A +L  F  + E+  + N  T   ++  C      Q+ G+ IH   ++  
Sbjct: 581 MSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVC----QSQLQGKCIHSYAVRNF 636

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                 + +S +  Y  F  ++   +  +     ++  W A +SA V        V  F 
Sbjct: 637 TRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQADMVVDCFK 696

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            ++    +PD   +  ++++C+ +G       I   +++ GF+T + V +A+ID +++CG
Sbjct: 697 HMLFLNVRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCG 756

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            I  AR  FD S    D + +  +I AY+ HG    A+++F  M  + + P   TFVS++
Sbjct: 757 SISLARELFDSSVE-KDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSIL 815

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC+H GLV++G  LFKS+ + YG+ P  + Y C+VD+L R G+L++A  V+  MPF+PS
Sbjct: 816 SACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLLGRTGHLDEAYDVVRSMPFRPS 875

Query: 719 PTVYRSLLSGCRIHGNKELGE 739
             +  SLL  CR HGN ++GE
Sbjct: 876 DNLLESLLGACRFHGNYKIGE 896



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 150/677 (22%), Positives = 301/677 (44%), Gaps = 45/677 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++H  +++ G   ++ +Q  L+ +Y+K G      RVFD M  R+L+SW  +VS   
Sbjct: 157 LGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYS 216

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N  F   ++M  +M+  G  PN      ++ +C S+G  + G S+H FALK  +  +  
Sbjct: 217 LNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDES 276

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  +++  YA   D++++  VF      D+  +N+MI  Y       EA  +   M    
Sbjct: 277 LTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVA 336

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T ++ L  CS     + G  +HG+II+  +   +S+ +AL+ MY K   +D + 
Sbjct: 337 VRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSL 396

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F                                        P+  T   ++  C    
Sbjct: 397 LLF-----------------------------------CCCVAPDATTIMNVISGCRYTK 421

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL +   +   A+   F    +V ++L+ M+  C  +  +H++F  +  + + +WN ++S
Sbjct: 422 DLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMIS 481

Query: 422 GYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           G+     D+D  L  FC ++   V+ +  T   ++ +     +  +   +H   IK+G +
Sbjct: 482 GFA-EIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCN 540

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + ++LI  Y N G ++   +  +     +  ++ A+MS       + + + +F+ +
Sbjct: 541 SDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQM 600

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           VE  EKP+   L T+LN      +  + K IH + ++     E  + ++ +  Y++  +I
Sbjct: 601 VENDEKPN---LVTLLNLLPVCQSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNI 657

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           +     F     + ++IV+N  + A          ++ F  M   N++P   T ++++SA
Sbjct: 658 EYCSKIFSL-IGARNLIVWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLALISA 716

Query: 661 CSHKGLVD-KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           CS  G      C++  ++  Q G   +      L+D  SR G +  A+ + +    + S 
Sbjct: 717 CSQLGNAYFAACIM--AVILQKGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSV 774

Query: 720 TVYRSLLSGCRIHGNKE 736
           T + ++++   +HGN E
Sbjct: 775 T-WGAMINAYSMHGNGE 790



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/599 (22%), Positives = 256/599 (42%), Gaps = 40/599 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAAIQ 122
           ++H H+   G   D F+   L+  Y   G       +F E   +   + S  L V     
Sbjct: 59  ELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFSD 118

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G     L +Y ++    F  + F    V++ C ++     G  +HC  L+     N  V
Sbjct: 119 HGFHRELLHLYRELCC--FGSDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGV 176

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++L+ YAK G +  + RVF  +   D+  WNAM+ GY+      EA+ ++  M   G+
Sbjct: 177 QTALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGM 236

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  TF+  +  C  V D D+G  +H   ++  V    S+ +ALI MY     +  +  
Sbjct: 237 RPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRM 296

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+    KD++S+N++   + ++    +   +F        RPN VT   +L  C     
Sbjct: 297 VFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFG 356

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           ++ G  +  + +  G  +  +V S+L+ M+ + G ++                     S 
Sbjct: 357 INHGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDS--------------------SL 396

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
             F CC A    T  N+      ++GC +         +++  M   IH   ++  F S 
Sbjct: 397 LLFCCCVAPDATTIMNV------ISGCRY---------TKDLHMAKSIHAYAVRNKFESY 441

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L+  Y +   +  S       E   + SW  M+S     G +   + +F  +  
Sbjct: 442 HSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFH 501

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              + D   L  +++S +  G     +S+H   IK G N++V + +A+I  YA CG ++ 
Sbjct: 502 EEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEA 561

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            +  FD S  S + I YN L+  Y  + + ++ + +F +M   + +P+  T ++++  C
Sbjct: 562 GQQLFD-SCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVC 619



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 218/490 (44%), Gaps = 40/490 (8%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           ++ FV   ++  Y   G  A+A  +F     S   V   N  +  ++  G+  E L++  
Sbjct: 71  QDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFSDHGFHRELLHLYR 130

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +   G   D +TF   ++ C+ V+   +GR++H  ++R+    ++ +  AL+D+Y K+ 
Sbjct: 131 ELCCFG--SDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAG 188

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D + +VF+ M  +D+ISWN +  G+S N+   +   +  +    G RPN  TF  ++ 
Sbjct: 189 QIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVG 248

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            CG + D D+G  L   AL  G +++E++TS+LI M+     +  +  VFD    K++ +
Sbjct: 249 MCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVS 308

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +N ++S Y  +    +  + F  +    V  N  T   V+ +C           +HG II
Sbjct: 309 FNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMII 368

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G +    + S+L+  Y   G+LD+S                                 
Sbjct: 369 KLGLAEHVSVASALVSMYSKLGKLDSSL-------------------------------L 397

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F   V     PD   +  +++ C         KSIH + ++  F +   V +A++  YA
Sbjct: 398 LFCCCV----APDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYA 453

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
            C DI  +   F Q      +I +NT+I  +A  G     + +F +M    +Q    T +
Sbjct: 454 DCRDISTSHTLF-QKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLI 512

Query: 656 SVMSACSHKG 665
            ++S+ S  G
Sbjct: 513 GLISSFSVPG 522



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 5/204 (2%)

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN-SFEFSNG-AERLDMASWGAMMSALVH 526
           ++H  +   G     ++ + L++ YV FG+  + +  F+     R  + S    +     
Sbjct: 59  ELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFSD 118

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G + E + ++  L   G   D +    ++ +C A+   +  + +H  V++ G    V V
Sbjct: 119 HGFHRELLHLYRELCCFGS--DNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGV 176

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A++D YAK G I  +R  FD      D+I +N ++  Y+ +    EA+E+  +M+   
Sbjct: 177 QTALLDLYAKAGQIDVSRRVFD-CMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGG 235

Query: 647 LQPSQATFVSVMSACSHKGLVDKG 670
           ++P+ +TFV ++  C   G  D G
Sbjct: 236 MRPNASTFVGIVGMCGSVGDRDVG 259



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 35/238 (14%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + +   +S    L +      +   I++ GF+ +I + N LI  +S+CG      
Sbjct: 703 VRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTNILVLNALIDTHSRCGSISLAR 762

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD   E++ V+W  +++A   +G  +  L ++  M  +G  P++    S++  C   G
Sbjct: 763 ELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMIDSGVDPDDITFVSILSACAHNG 822

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G ++                     F +   D     R+ +         +  M+ 
Sbjct: 823 LVEQGRTL---------------------FKSLQADYGITPRMEH---------YACMVD 852

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG-CSLVADFDIGRQIHGLIIRSE 276
                G+  EA +VV SM F          + +L G C    ++ IG  I  L+I+SE
Sbjct: 853 LLGRTGHLDEAYDVVRSMPFRP----SDNLLESLLGACRFHGNYKIGESIGKLLIKSE 906


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 176/582 (30%), Positives = 305/582 (52%), Gaps = 5/582 (0%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G SVL+FY K G + +A  VF S+ S D   WN MI G+   G   + L          
Sbjct: 72  TGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIA 131

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              +  T + A+  C  +   + G ++HG IIRS      S+ N+L+ MY   + M+ A 
Sbjct: 132 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMY-ADNDMERAE 190

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKL 360
           ++F+ M ++DVISW+ + GG+ +         LF +   + S   + +T   +L+ C   
Sbjct: 191 ELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANT 250

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            D+ +G  +  + +  G   +  V +S+I M+ +C   E A   F+ +  +N  +WN ++
Sbjct: 251 GDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSII 310

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG       ++ L  F ++ ++G   +  T   ++++C    +      IH  +I+ G+ 
Sbjct: 311 SGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYE 370

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ +SLI +Y     ++ +++  +  +  D  SW AM++   H G   EA+ +F  +
Sbjct: 371 LNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM 430

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            +A EKP+   + ++L + +     +R+K  H   I+ G   EV V +A++D YAKCG+I
Sbjct: 431 NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 490

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             +R AFDQ    N ++ +  +I A   +GL  +A+ +  +MKL  L+P+  T +SV+SA
Sbjct: 491 GLSRKAFDQIPEKN-IVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSA 549

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP--FQPS 718
           CSH GLV++G   F++M   +G++P  + Y C+VDMLSR G L  A ++IE MP   +  
Sbjct: 550 CSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDG 609

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ +LLS CR  GN  LG  A+ ++L L P++ A + L S
Sbjct: 610 AGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLAS 651



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/539 (26%), Positives = 255/539 (47%), Gaps = 17/539 (3%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF +     N+++  Y K G     L VFD M  R+ VSW +++   +  G  D GL  +
Sbjct: 65  GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
              +   F PN   +   +  C S+GA E G  +H + ++      P V  S+L+ YA  
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD- 183

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINA 252
            D+  AE +F  +   DV  W+ MIGGY   G    AL +   M     I +D  T ++ 
Sbjct: 184 NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ C+   D  +GR +HG++I   ++  + + N++IDMY K    + AFK F  M  ++ 
Sbjct: 244 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 303

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +SWN++  G    +   +  SLF+    +G R + VT   LL+ C   +D       QC 
Sbjct: 304 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD-----PFQCK 358

Query: 373 ALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +H      G+   E V +SLI  + +C  +E+A  +FD +  K+  +W+ +++G  FN 
Sbjct: 359 FIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG--FNH 416

Query: 428 CDA--DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           C    + +  F  + ++  + NG T   ++E    S + +     HG  I+ G ++   +
Sbjct: 417 CGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAV 476

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++++  Y   G++  S +  +     ++ SWGAM++A    G   +A+ +   +   G 
Sbjct: 477 GTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGL 536

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGA 603
           KP+     ++L++C+  G  +   S    +++  G    +   S ++D  ++ G +  A
Sbjct: 537 KPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSA 595



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 212/419 (50%), Gaps = 13/419 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG+I++ GF +   +QN+L++MY+          +FDEM ER+++SW++++   +Q
Sbjct: 155 GLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQ 213

Query: 123 NGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            GE  M L+++++M +N  +  +   + SV+K C + G    G S+H   +   ++ + F
Sbjct: 214 TGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLF 273

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG S+++ Y+K  D  +A + F  +   +   WN++I G        EAL++  SM   G
Sbjct: 274 VGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAG 333

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D+ T +N LQ C    D    + IH ++IR   E +  ++N+LID Y K   ++ A+
Sbjct: 334 FRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAW 393

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F+R+  KD +SW+ +  GF+    P +  +LF +   +  +PN VT   LL       
Sbjct: 394 KLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSA 453

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL        +A+  G   E  V ++++ M+ +CG + ++   FD +  KNI +W  +++
Sbjct: 454 DLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIA 513

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
               N    D L     +   G++ N  T   V+  C            HG +++ G S
Sbjct: 514 ACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACS-----------HGGLVEEGLS 561



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 180/395 (45%), Gaps = 6/395 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +  S++ +  D I +   L    N     +G  VHG ++  G   D+F+ N++I MYSKC
Sbjct: 226 EMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKC 285

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                  + F+EM  RN VSW  I+S  ++  +    L ++  M   GF  +E  + +++
Sbjct: 286 DDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLL 345

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C           IH   ++   E N FV  S+++ Y+K   +  A ++F  + + D  
Sbjct: 346 QSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTV 405

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W+AMI G+ HCG   EA+ +   M       +  T ++ L+  S+ AD    +  HG+ 
Sbjct: 406 SWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIA 465

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           IR  +   +++  A++DMY K   +  + K F+++ +K+++SW  +      N       
Sbjct: 466 IRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDAL 525

Query: 333 SLFHKFILSGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           +L  +  L G +PN VT   +L  C  G L++  L      +  H G        S ++ 
Sbjct: 526 ALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDH-GVEPGLEHYSCMVD 584

Query: 391 MFCRCGAVEMAHSVFDNVSYK---NITTWNELLSG 422
           M  R G +  A ++ + +  +       W  LLS 
Sbjct: 585 MLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSA 619



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 532 EAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA + +H + +AG +  D  ++ +IL +C+++                GF++     ++V
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSLP---------------GFDSLTSTGNSV 76

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           +D Y K G +  A   FD S  S D + +N +I  +   G   + +  F + ++   +P+
Sbjct: 77  LDFYMKTGALDSALFVFD-SMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPN 135

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
            +T V  + AC   G +++G L       + G    P     L+ M + N  +E A+ + 
Sbjct: 136 VSTLVLAIHACRSLGAMEEG-LKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELF 193

Query: 711 EIM 713
           + M
Sbjct: 194 DEM 196


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 288/576 (50%), Gaps = 6/576 (1%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y K G VA A  VF++I   +   W  ++  +A  G+  EAL     M+ EG+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           F+ A+  CS   D   G+ +H +I+ + + E  I +  ALI MY +   ++ A K F+ M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFI---LSGSRPNHVTFSILLRQCGKLLDLD 364
             K +++WN L  G+S N +      ++   +     G +P+ +TFS  L  C  + D+ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G +++   +  G+  +  V ++LI M+ +CG++E A  VFD +  +++  WN ++SGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                   L+ F  +  +  + N  TF  ++  C   E+ +    IH  + + G+ S   
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 485 ICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I + L+  Y      L+ + +        D+ +W  ++ A V  G   +A+ IF  +   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              P+E  L  +L++CA +GA ++ K++H  +       +V + +++++ Y +CG +   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F  +     ++ ++TLI AYA HG     +E F ++    L     T VS +SACSH
Sbjct: 421 VGVF-AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G++ +G   F SM   +G+ P    + C+VD+LSR G LE A+++I  MPF P    + 
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           SLLSGC++H + +     ++KL  L  +++ + V L
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTL 575



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/563 (26%), Positives = 258/563 (45%), Gaps = 10/563 (1%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY KCG     L VF  +   N VSWTLIV+A  +NG +   L  Y  M   G  P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
               + VC S    + G  +H   L+ R +E +  +G +++  YA+  D+  A + F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF---EGITMDKYTFINALQGCSLVADFD 263
               +  WNA+I GY+  G    AL +   M+    EG+  D  TF +AL  C++V D  
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            GR+I    + S       + NALI+MY K   ++ A KVF+R+ ++DVI+WNT+  G++
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +     Q   LF +   +  +PN VTF  LL  C  L DL+ G  +       G+  +  
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300

Query: 384 VTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           + + L+ M+ +C  ++E A  VF+ +  +++ TWN L+  Y       D L  F  +   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLIKSYVNFGQLDN 501
            V  N  T   V+  C     ++    +H A+I +G      +  +SL+  Y   G LD+
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVH-ALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +           + SW  +++A    GH+   +  F  L++ G   D+  + + L++C+ 
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 562 IGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR-MAFDQSFNSNDVIVY 619
            G  +   ++    V   G   +      ++D  ++ G ++ A  +  D  F   D + +
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP-DAVAW 538

Query: 620 NTLIMAYAHHGLVSEAMEIFDKM 642
            +L+     H     A  + DK+
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKL 561



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 237/545 (43%), Gaps = 40/545 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           LR D      ++ +  + K    G  +H  I++      DI L   LI MY++C      
Sbjct: 54  LRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELA 113

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM---KTNGFMPNEFAVGSVMKVC 155
            + FDEM ++ LV+W  +++   +NG+    LK+Y DM      G  P+     S +  C
Sbjct: 114 RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +G    G  I    +      +  V  +++N Y+K G + +A +VF  + + DV  WN
Sbjct: 174 TVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWN 233

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI GYA  G   +AL +   M       +  TFI  L  C+ + D + GR IH  +   
Sbjct: 234 TMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED 293

Query: 276 EVECSISIVNALIDMYIK-SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             E  + I N L++MY K SS ++ A +VFERM  +DVI+WN L   + +         +
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDI 353

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC----GFLDEENV-TSSLI 389
           F +  L    PN +T S +L  C       LG + Q  A+H     G    + V  +SL+
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAV-----LGAKRQGKAVHALIASGRCKADVVLENSLM 408

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ RCG+++    VF  +  K++ +W+ L++ Y  +      L+ F  + + G+  +  
Sbjct: 409 NMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDV 468

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS--LIKSYVNF----------G 497
           T    +  C            HG ++K G  +   +     L   Y +F          G
Sbjct: 469 TMVSTLSACS-----------HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAG 517

Query: 498 QLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +L+ +    +    L D  +W +++S          A  +   L E  E  DE+   T+L
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL-ESEDEHSTVTLL 576

Query: 557 NSCAA 561
           ++  A
Sbjct: 577 SNVYA 581



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 116/301 (38%), Gaps = 52/301 (17%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + I L+  LS    L ++  G  VH  I       D+ L+N+L+ MY++CG     + VF
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVF 424

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + +++LVSW+ +++A  Q+G    GL+ + ++   G   ++  + S +  C   G  +
Sbjct: 425 AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLK 484

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G                     V  F + +GD   A          D   +  M+   +
Sbjct: 485 EG---------------------VQTFLSMVGDHGLAP---------DYRHFLCMVDLLS 514

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G    A N++  M F     D   + + L GC L  D     ++   +   E E   S
Sbjct: 515 RAGRLEAAENLIHDMPF---LPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHS 571

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG----QTASLFHKF 338
            V  L ++Y ++   D   K   R A +               KNPG    +     H+F
Sbjct: 572 TVTLLSNVYAEAGRWDDVRKTRNRRAAR---------------KNPGCSYIEINDTVHEF 616

Query: 339 I 339
           +
Sbjct: 617 V 617


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  285 bits (729), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 181/714 (25%), Positives = 345/714 (48%), Gaps = 8/714 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           +SLS+ + +       H   V  G + + F+   LI++Y    +      +F  +  ++ 
Sbjct: 15  ISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDT 74

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
             W   +        +   L  Y  M++   +PN F    V            G ++H  
Sbjct: 75  FLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHAL 134

Query: 171 ALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
           A K+    +N  VG S ++ Y++  ++  A +VF  I   DV  W A++ GY   G    
Sbjct: 135 ACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEM 194

Query: 230 ALNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
            L  +S M   G    K    T       C  + D   GR +HGL++++ + C + I ++
Sbjct: 195 GLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSS 254

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++ MY K      A++ F  + +KD++SW ++   ++           F + + +   P+
Sbjct: 255 VLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +    +L   G  +D+  G     L +   +  +E V +SL+ M+C+ G +  A  +F 
Sbjct: 315 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ 374

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
             S  +I  WN ++ GY     +   ++ F  +   G+          + +C +     +
Sbjct: 375 R-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINL 433

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              IH  +IK        + +SLI+ Y    +++ S+   N +ER D+  W A++SA +H
Sbjct: 434 GRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRSER-DVILWNALISAHIH 492

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
             H  EA+++F  ++   + P+   L  +L++C+ +   ++ + +H ++ + GF   + +
Sbjct: 493 VKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPL 552

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A++D YAKCG ++ +R  FD S    DVI +N +I  Y  +G    A+EIF+ M+ +N
Sbjct: 553 GTALVDMYAKCGQLEKSREVFD-SMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESN 611

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           ++P++ TF+S++SAC+H GLV++G  +F  M S Y ++P+   Y C+VD+L R+  LE+A
Sbjct: 612 VKPNEITFLSLLSACAHAGLVEEGKNVFAKMQS-YSVKPNLKHYTCMVDLLGRSCNLEEA 670

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + ++  MP  P   V+ +LLS C+ H   E+G    +  +   P+ND  +++++
Sbjct: 671 EELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVA 724



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 248/530 (46%), Gaps = 28/530 (5%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL   V G  +HG +VK G    + +Q+++++MY KCG      + F E+  ++L+SWT 
Sbjct: 226 NLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTS 285

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++    + G     ++ + +M  N   P+   +G ++    +      G + H   ++  
Sbjct: 286 MIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRH 345

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
              +  V  S+L+ Y K G ++ AER+F   S   +  WN MI GY   G   + + +  
Sbjct: 346 YAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFR 404

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M + GI  +    ++A+  C  + + ++GR IH  +I+  V+ +IS+ N+LI+MY K  
Sbjct: 405 EMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCD 464

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            M+ ++++F R +++DVI WN L       K+  +  SLF   I+    PN  T  ++L 
Sbjct: 465 KMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLS 523

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L  L+ G +L       GF     + ++L+ M+ +CG +E +  VFD++  K++  
Sbjct: 524 ACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVIC 583

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIH 471
           WN ++SGY  N      ++ F  + ES V+ N  TF  ++  C  +    E + +  ++ 
Sbjct: 584 WNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQ 643

Query: 472 GAIIKTGFSSCGYIC-SSLIKSYVNFGQLDNSFEFSNGAERL--------DMASWGAMMS 522
              +K       Y C   L+    N  +          AE L        D   WGA++S
Sbjct: 644 SYSVKPNLKH--YTCMVDLLGRSCNLEE----------AEELVLSMPIPPDGGVWGALLS 691

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           A          + I  + +++  + D Y +  + N  ++IG +   +++ 
Sbjct: 692 ACKTHNQIEMGIRIGKNAIDSEPENDGYYI-MVANMYSSIGRWDEAENVR 740



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 129/262 (49%), Gaps = 3/262 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWG 98
           +R + + +  +++    L    LG  +H +++K GF ++ I + N+LI MY KC      
Sbjct: 411 IRSESVGIVSAIASCGQLGEINLGRSIHCNVIK-GFVDETISVTNSLIEMYGKCDKMNVS 469

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            R+F+  +ER+++ W  ++SA I    ++  + ++  M      PN   +  V+  C  +
Sbjct: 470 WRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHL 528

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              E G  +H +  +   + N  +G ++++ YAK G +  +  VF S+   DV CWNAMI
Sbjct: 529 AFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMI 588

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   GY   A+ + + M    +  ++ TF++ L  C+     + G+ +   +    V+
Sbjct: 589 SGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVK 648

Query: 279 CSISIVNALIDMYIKSSGMDYA 300
            ++     ++D+  +S  ++ A
Sbjct: 649 PNLKHYTCMVDLLGRSCNLEEA 670


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 284/526 (53%), Gaps = 20/526 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           ++  LQ C     +   + +HG ++++    +  +++ L+++Y K   M+ A +VF+ M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++V++W TL  GF +N  P     +F + + +GS P+  T S +L  C  L  L LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 369 LQC--LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
                +  H  F  + +V S+L  ++ +CG +E A   F  +  KN+ +W   +S    N
Sbjct: 190 FHAYIIKYHVDF--DASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADN 247

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
                 L+ F  +    ++ N  T    +  CC   + ++  Q++   IK G+ S   + 
Sbjct: 248 GAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVR 307

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS-------------ALVHQGHNHEA 533
           +SL+  Y+  G +  +    N  +   M +W AM++             +  H+G   EA
Sbjct: 308 NSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS--EA 365

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  L  +G KPD + L ++L+ C+ + A ++ + IH   IK GF ++V V++++I  
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y+KCG I+ A  AF +  ++  +I + ++I  ++ HG+  +A+ IF+ M LA ++P+  T
Sbjct: 426 YSKCGSIERASKAFLE-MSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVT 484

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV V+SACSH G+V +    F+ M  +Y ++P+ D Y C+VDM  R G LE A + I+ M
Sbjct: 485 FVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKM 544

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++PS  ++ + ++GC+ HGN ELG +A+E+LL L PK+   +VLL
Sbjct: 545 NYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLL 590



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 226/457 (49%), Gaps = 22/457 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHGH++K G  ++ F+ + L+ +Y+KCG      RVFD M  RN+V+WT ++   +QN +
Sbjct: 89  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQNSQ 148

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               + ++ +M   G  P+ + + +V+  C S+ + + G   H + +K  ++ +  VG +
Sbjct: 149 PKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSA 208

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           + + Y+K G +  A + F  I   +V  W + +   A  G   + L +   M+   I  +
Sbjct: 209 LCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPN 268

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           ++T  +AL  C  +   ++G Q++ L I+   E ++ + N+L+ +Y+KS  +  A ++F 
Sbjct: 269 EFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFN 328

Query: 306 RMADKDVISWNTLFGG-----------FSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           RM D  +++WN +  G            S      +   LF K  LSG +P+  T S +L
Sbjct: 329 RMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVL 388

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C ++L ++ G Q+    +  GFL +  V++SLI M+ +CG++E A   F  +S + + 
Sbjct: 389 SVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMI 448

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ----- 469
            W  +++G+  +      L  F ++  +GV  N  TF  V+  C  +    MV Q     
Sbjct: 449 AWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHA---GMVSQALNYF 505

Query: 470 -IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            I     K   +   Y C  ++  +V  G+L+ +  F
Sbjct: 506 EIMQKKYKIKPAMDHYEC--MVDMFVRLGRLEQALNF 540



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 183/389 (47%), Gaps = 13/389 (3%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+  L    +L+S  LG Q H +I+K     D  + + L ++YSKCG     L+ F  + 
Sbjct: 171 LSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR 230

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+N++SWT  VSA   NG    GL+++V+M      PNEF + S +  C  + + E G  
Sbjct: 231 EKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQ 290

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH--- 223
           ++   +K   E N  V  S+L  Y K G +  A R+F  +    +  WNAMI G+A    
Sbjct: 291 VYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMME 350

Query: 224 --------CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
                   C  G EAL + S +   G+  D +T  + L  CS +   + G QIH   I++
Sbjct: 351 LTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKT 410

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
                + +  +LI MY K   ++ A K F  M+ + +I+W ++  GFS++    Q   +F
Sbjct: 411 GFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIF 470

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
               L+G RPN VTF  +L  C     +   L   + +          +    ++ MF R
Sbjct: 471 EDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVR 530

Query: 395 CGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
            G +E A +    ++Y+     W+  ++G
Sbjct: 531 LGRLEQALNFIKKMNYEPSEFIWSNFIAG 559



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 146/307 (47%), Gaps = 25/307 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +   L  +LS    + S  LGTQV+   +K G+ +++ ++N+L+ +Y K G      
Sbjct: 265 IKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAH 324

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDM-----------GLKMYVDMKTNGFMPNEFAV 148
           R+F+ M + ++V+W  +++   Q  E               LK++  +  +G  P+ F +
Sbjct: 325 RLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTL 384

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            SV+ VC  M A E G  IH   +K     +  V  S+++ Y+K G +  A + F  +S+
Sbjct: 385 SSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMST 444

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD---- 261
             +  W +MI G++  G   +AL++   M   G+  +  TF+  L  CS   +V+     
Sbjct: 445 RTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNY 504

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           F+I ++      + +++ ++     ++DM+++   ++ A    ++M  +     W+    
Sbjct: 505 FEIMQK------KYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIA 558

Query: 321 GFSENKN 327
           G   + N
Sbjct: 559 GCKSHGN 565


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 162/576 (28%), Positives = 289/576 (50%), Gaps = 6/576 (1%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y K G VA A  VF++I   +   W  ++  +A  G+  EAL     M+ EG+  D   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           F+ A+  CS   D   G+ +H +I+ +++ E  I +  ALI MY +   ++ A K F+ M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFI---LSGSRPNHVTFSILLRQCGKLLDLD 364
             K +++WN L  G+S N +      ++   +     G +P+ +TFS  L  C  + D+ 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G +++   +  G+  +  V ++LI M+ +CG++E A  VFD +  +++  WN ++SGY 
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                   L+ F  +  +  + N  TF  ++  C   E+ +    IH  + + G+ S   
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 485 ICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I + L+  Y      L+ + +        D+ +W  ++ A V  G   +A+ IF  +   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              P+E  L  +L++CA +GA ++ K++H  +       +V + +++++ Y +CG +   
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDT 420

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F  +     ++ ++TLI AYA HG     +E F ++    L     T VS +SACSH
Sbjct: 421 VGVF-AAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G++ +G   F SM   +G+ P    + C+VD+LSR G LE A+++I  MPF P    + 
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           SLLSGC++H + +     ++KL  L  +++ + V L
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTL 575



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 258/563 (45%), Gaps = 10/563 (1%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY KCG     L VF  +   N VSWTLIV+A  +NG +   L  Y  M   G  P+   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
               + VC S    + G  +H   L+ + +E +  +G +++  YA+  D+  A + F  +
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF---EGITMDKYTFINALQGCSLVADFD 263
               +  WNA+I GY+  G    AL +   M+    EG+  D  TF +AL  CS+V D  
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            GR+I    + S       + NALI+MY K   ++ A KVF+R+ ++DVI+WNT+  G++
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
           +     Q   LF +   +  +PN VTF  LL  C  L DL+ G  +       G+  +  
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300

Query: 384 VTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           + + L+ M+ +C  ++E A  VF+ +  +++ TWN L+  Y       D L  F  +   
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLIKSYVNFGQLDN 501
            V  N  T   V+  C     ++    +H A+I +G      +  +SL+  Y   G LD+
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVH-ALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +           + SW  +++A    GH+   +  F  L++ G   D+  + + L++C+ 
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479

Query: 562 IGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR-MAFDQSFNSNDVIVY 619
            G  +   +S    V   G   +      ++D  ++ G ++ A  +  D  F   D + +
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLP-DAVAW 538

Query: 620 NTLIMAYAHHGLVSEAMEIFDKM 642
            +L+     H     A  + DK+
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKL 561



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 142/545 (26%), Positives = 237/545 (43%), Gaps = 40/545 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           LR D      ++ +  + K    G  +H  I++      DI L   LI MY++C      
Sbjct: 54  LRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELA 113

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM---KTNGFMPNEFAVGSVMKVC 155
            + FDEM ++ LV+W  +++   +NG+    LK+Y DM      G  P+     S +  C
Sbjct: 114 RKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYAC 173

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +G    G  I    +      +  V  +++N Y+K G + +A +VF  + + DV  WN
Sbjct: 174 SVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWN 233

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            MI GYA  G   +AL +   M       +  TFI  L  C+ + D + GR IH  +   
Sbjct: 234 TMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEH 293

Query: 276 EVECSISIVNALIDMYIK-SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             E  + I N L++MY K SS ++ A +VFER+  +DVI+WN L   + +         +
Sbjct: 294 GYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDI 353

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC----GFLDEENV-TSSLI 389
           F +  L    PN +T S +L  C       LG + Q  A+H     G    + V  +SL+
Sbjct: 354 FKQMQLENVAPNEITLSNVLSACAV-----LGAKRQGKAVHALIASGRCKADVVLENSLM 408

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ RCG+++    VF  +  K++ +W+ L++ Y  +      L+ F  + + G+  +  
Sbjct: 409 NMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDV 468

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS--LIKSYVNF----------G 497
           T    +  C            HG ++K G  S   +     L   Y +F          G
Sbjct: 469 TMVSTLSACS-----------HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAG 517

Query: 498 QLDNSFEFSNGAERL-DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +L+ +    +    L D  +W +++S          A  +   L E  E  DE+   T+L
Sbjct: 518 RLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL-ESEDEHSTVTLL 576

Query: 557 NSCAA 561
           ++  A
Sbjct: 577 SNVYA 581


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 293/555 (52%), Gaps = 2/555 (0%)

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            +I GY       E +++ S +  EG  ++ + F   L+    V   ++   +H  I + 
Sbjct: 11  TLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKL 70

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             E +  +  ALID Y     ++ A + F+ +A KD++SW  +   ++EN     +  LF
Sbjct: 71  GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +  + G  PNH TF+ +L+ C  L    +G  +    L   +  +  V   L+ ++ + 
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G       VF+ +   ++  W+ ++S Y  +    + ++ F  +  + V  N  TF  V+
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           ++C   EN Q+  Q+H  ++K G     ++ ++L+  Y   G+LDNS +        +  
Sbjct: 251 QSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEV 310

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W  M+   V  G   +A++++ +++E   +  E    ++L +CA++ A +    IH   
Sbjct: 311 TWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLS 370

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           +K  ++ +V V +A+ID YAKCG IK AR+ FD   +  D I +N +I  Y+ HGLV EA
Sbjct: 371 LKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDM-LSERDEISWNAMISGYSMHGLVGEA 429

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           ++ F  M+     P++ TFVS++SACS+ GL+D G   FKSM   YG++P  + Y C+V 
Sbjct: 430 LKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVW 489

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +L R+G+L+ A  +IE +P +P+  V+R+LL  C IH + +LG  +++++L + P+++A 
Sbjct: 490 LLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEAT 549

Query: 756 HVLLSK-RKRQREGN 769
           HVLLS    R R  N
Sbjct: 550 HVLLSNIYARTRRWN 564



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 222/416 (53%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P      L L  +++   L   +H  I KLG  ++ F+   LI  Y+ CG      + F
Sbjct: 40  NPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAF 99

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +A +++VSWT +V+   +N  F   L+++ +M+  GF PN F    V+K C+ + A  
Sbjct: 100 DAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFS 159

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G S+H   LK   E + +VG  +L+ Y K GD     RVF  +   DV  W+ MI  YA
Sbjct: 160 VGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYA 219

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EA+ +   M    +  +++TF + LQ C+ + +  +G+Q+H  +++  ++ ++ 
Sbjct: 220 QSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVF 279

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+D+Y K   +D + K+F  + +++ ++WNT+  G+ ++ +  +  SL+   +   
Sbjct: 280 VSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            + + VT+S +LR C  L  ++LG Q+  L+L   +  +  V ++LI M+ +CG+++ A 
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            VFD +S ++  +WN ++SGY  +    + LK F  + E+    N  TF  ++  C
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 227/460 (49%), Gaps = 2/460 (0%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +RN VS+  ++   +Q+ + D  + ++  +   G   N F   +++K+ VS+  +E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           YS+H    K+  E N FVG ++++ YA  G V +A + F +I+  D+  W  M+  YA  
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               ++L + + M   G   + +TF   L+ C  +  F +G+ +HG ++++  E  + + 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
             L+D+Y K    +   +VFE M   DVI W+ +   ++++    +   LF +   +   
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TF+ +L+ C  + +L LG Q+ C  L  G      V+++L+ ++ +CG ++ +  +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +  +N  TWN ++ GY  +      L  + N+ E  V+ +  T+  V+  C      
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSA 523
           ++  QIH   +KT +     + ++LI  Y   G + N+   F   +ER D  SW AM+S 
Sbjct: 361 ELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSER-DEISWNAMISG 419

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
               G   EA+  F  + E    P++    +IL++C+  G
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 199/378 (52%), Gaps = 3/378 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L++  +G  VHG ++K  +  D+++   L+ +Y+K G     LRVF+EM + +++ W+ +
Sbjct: 155 LEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFM 214

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S   Q+ +    ++++  M+    +PN+F   SV++ C S+   + G  +HC  LK+ +
Sbjct: 215 ISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGL 274

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N FV  ++++ YAK G +  + ++F  + + +   WN MI GY   G G +AL++  +
Sbjct: 275 DGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKN 334

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML   +   + T+ + L+ C+ +A  ++G QIH L +++  +  + + NALIDMY K   
Sbjct: 335 MLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGS 394

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A  VF+ ++++D ISWN +  G+S +   G+    F     +   PN +TF  +L  
Sbjct: 395 IKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSA 454

Query: 357 CGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
           C     LD+G    + +    G        + ++++  R G ++ A  + + +  + N+ 
Sbjct: 455 CSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVK 514

Query: 415 TWNELLSGYCFNCCDADV 432
            W  LL G C    D D+
Sbjct: 515 VWRALL-GACVIHNDVDL 531



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 204/427 (47%), Gaps = 3/427 (0%)

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M D++ +S+ TL  G+ ++    +   LF +    G   N   F+ +L+    +   +L 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
             L       G      V ++LI  +  CG+V  A   FD ++ K++ +W  +++ Y  N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               D L+ F  +   G   N  TF  V++ C   E   +   +HG ++KT +    Y+ 
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
             L+  Y  FG  ++         + D+  W  M+S       + EAV +F  +  A   
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P+++   ++L SCA+I   Q  K +H  V+K+G +  V+V++A++D YAKCG +  +   
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F +  N N+V  +NT+I+ Y   G   +A+ ++  M    +Q S+ T+ SV+ AC+    
Sbjct: 301 FMELPNRNEV-TWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAA 359

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           ++ G  +  S+  +            L+DM ++ G +++A+ V +++  +     + +++
Sbjct: 360 MELGTQI-HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS-ERDEISWNAMI 417

Query: 727 SGCRIHG 733
           SG  +HG
Sbjct: 418 SGYSMHG 424



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 145/286 (50%), Gaps = 2/286 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           +F+  +    A  L    ++++  LG QVH H++K+G   ++F+ N L+ +Y+KCG    
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            +++F E+  RN V+W  ++   +Q+G+ D  L +Y +M       +E    SV++ C S
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + A E G  IH  +LK   +K+  VG ++++ YAK G +  A  VF  +S  D   WNAM
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAM 416

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE- 276
           I GY+  G   EAL     M       +K TF++ L  CS     DIG+     +++   
Sbjct: 417 ISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           +E  +     ++ +  +S  +D A K+ E +  + +V  W  L G 
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGA 522


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 153/551 (27%), Positives = 294/551 (53%), Gaps = 5/551 (0%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN ++   +      E L   S M  +    D +T   AL+ C  + + + G  IHG + 
Sbjct: 9   WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 68

Query: 274 RS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +   +   + + ++LI MYIK   M  A ++F+ +   D+++W+++  GF +N +P Q  
Sbjct: 69  KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 128

Query: 333 SLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             F + ++ S   P+ VT   L+  C KL +  LG  +    +  GF ++ ++ +SL+  
Sbjct: 129 EFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNC 188

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +  A + A ++F  ++ K++ +W+ +++ Y  N   A+ L  F ++ + G E N  T 
Sbjct: 189 YAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATV 248

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C  + + +   + H   I+ G  +   + ++L+  Y+     + ++   +   R
Sbjct: 249 LCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR 308

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFH-SLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
            D+ SW A++S     G  H ++  F   L+E   +PD  ++  +L SC+ +G  ++ K 
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKC 368

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            H +VIK GF++  ++ +++++ Y++CG +  A   F+      D +V+ +LI  Y  HG
Sbjct: 369 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN-GIALKDTVVWTSLITGYGIHG 427

Query: 631 LVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             ++A+E F+ M K + ++P++ TF+S++SACSH GL+ +G  +FK M + Y + P+ + 
Sbjct: 428 KGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEH 487

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y  LVD+L R G L+ A  + + MPF P+P +  +LL  CRIH N E+ E  ++KL  L 
Sbjct: 488 YAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 547

Query: 750 PKNDAAHVLLS 760
             +   ++L+S
Sbjct: 548 SNHAGYYMLMS 558



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 254/518 (49%), Gaps = 14/518 (2%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +R+L  W  ++ +  +  +++  L  +  M  +   P+ F +   +K C  +    +G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 165 YSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
             IH F  K + +  + +VG S++  Y K G +  A R+F  +   D+  W++M+ G+  
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 224 CGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G  ++A+     M+    +T D+ T I  +  C+ +++  +GR +HG +IR      +S
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +VN+L++ Y KS     A  +F+ +A+KDVISW+T+   + +N    +   +F+  +  G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           + PN  T   +L+ C    DL+ G +   LA+  G   E  V+++L+ M+ +C + E A+
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVETCCRS 461
           +VF  +  K++ +W  L+SG+  N      ++ F   + E+    +      V+ +C   
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 360

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +     H  +IK GF S  +I +SL++ Y   G L N+ +  NG    D   W +++
Sbjct: 361 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 420

Query: 522 SALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVI---K 577
           +     G   +A+  F+ +V++ E KP+E    +IL++C+  G       I   ++   +
Sbjct: 421 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 480

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGA-----RMAFDQS 610
           L  N E Y  + ++D   + GD+  A     RM F  +
Sbjct: 481 LAPNLEHY--AVLVDLLGRVGDLDTAIEITKRMPFSPT 516



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 240/523 (45%), Gaps = 37/523 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           + D   L  +L     L+    G  +HG + K +   +D+++ ++LI MY KCG     L
Sbjct: 38  KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 97

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSM 158
           R+FDE+ + ++V+W+ +VS   +NG     ++ +  M   +   P+   + +++  C  +
Sbjct: 98  RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 157

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             S  G  +H F ++     +  +  S+LN YAK      A  +F  I+  DV  W+ +I
Sbjct: 158 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 217

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G   EAL V + M+ +G   +  T +  LQ C+   D + GR+ H L IR  +E
Sbjct: 218 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 277

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + +  AL+DMY+K    + A+ VF R+  KDV+SW  L  GF+ N    ++   F   
Sbjct: 278 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 337

Query: 339 IL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +L + +RP+ +    +L  C +L  L+         +  GF     + +SL+ ++ RCG+
Sbjct: 338 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGS 397

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVE 456
           +  A  VF+ ++ K+   W  L++GY  +      L+TF ++ +S  V+ N  TF  ++ 
Sbjct: 398 LGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 457

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C            H  +I  G          + K  VN  +L  + E            
Sbjct: 458 ACS-----------HAGLIHEGL--------RIFKLMVNDYRLAPNLE-----------H 487

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +  ++  L   G    A+ I   +  +   P   ILGT+L +C
Sbjct: 488 YAVLVDLLGRVGDLDTAIEITKRMPFS---PTPQILGTLLGAC 527


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  285 bits (728), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 270/506 (53%), Gaps = 12/506 (2%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R IHG I+++     + ++  L+++Y K   M+ A KVF+ +  ++V +W TL  G+ +
Sbjct: 77  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N +P     LF K + +G+ P++ T  I+L  C  L  ++ G Q+    +      + ++
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            +SL   + +   +E A   F  +  K++ +W  ++S  C N   A  L  F ++   G+
Sbjct: 197 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 256

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + N  T   V+  CC      +  QIH   IK G+ S   I +S++  Y+  G L  + +
Sbjct: 257 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 316

Query: 505 FSNGAERLDMASWGAMMSA-----------LVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G E L++ +W AM++            +        A+ +F  L  +G KPD +   
Sbjct: 317 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 376

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L+ C+ + A ++ + IH  +IK G   +V V +A++  Y KCG I  A  AF +   S
Sbjct: 377 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLE-MPS 435

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
             +I + ++I  +A HGL  +A+++F+ M+L  ++P+Q TFV V+SACSH GL D+    
Sbjct: 436 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 495

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F+ M  QY ++P  D + CL+DM  R G +E+A  V+  M F+P+ T++  L++GCR HG
Sbjct: 496 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 555

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLL 759
             +LG +A+E+LL L PK+   +V L
Sbjct: 556 KSDLGFYAAEQLLKLKPKDVETYVSL 581



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 217/416 (52%), Gaps = 14/416 (3%)

Query: 60  RVLGTQ---VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           R L T+   +HGHIVK GF  D+F+   L+ +YSKCG      +VFD +  RN+ +WT +
Sbjct: 71  RNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTL 130

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  +QN    + L++++ M   G  P+ + +G V+  C S+ + EFG  +H + +K  I
Sbjct: 131 LTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHI 190

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + +  +G S+ +FY+K   +  A + F  I   DV  W ++I      G    +L+    
Sbjct: 191 DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 250

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML +G+  ++YT  + L  C ++   D+G QIH L I+     SI I N+++ +Y+K   
Sbjct: 251 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 310

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSE-----------NKNPGQTASLFHKFILSGSRP 345
           +  A K+FE M   ++++WN +  G ++           +K+     ++F K   SG +P
Sbjct: 311 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 370

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  TFS +L  C  L+ L+ G Q+    +  G L +  V ++L+ M+ +CG+++ A   F
Sbjct: 371 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAF 430

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +  + + +W  +++G+  +      L+ F ++   G++ N  TF  V+  C  +
Sbjct: 431 LEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHA 486



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 263/575 (45%), Gaps = 49/575 (8%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C+    +     IH   +K    ++ FV   ++N Y+K G + +A +VF ++   +
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W  ++ GY    +   AL +   ML  G     YT    L  CS +   + G+Q+H 
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +I+  ++   SI N+L   Y K   +++A K F+ + +KDVISW ++     +N    +
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           + S F   +  G +PN  T + +L  C  +L LDLG Q+  L++  G+     + +S++Y
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADV---------LKTFCNI 439
           ++ +CG +  A  +F+ +   N+ TWN +++G+    +  + DV         L  F  +
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
           + SG++ +  TF  V+  C      +   QIHG IIK+G  +   + ++L+  Y   G +
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSI 423

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D + +         M SW +M++     G + +A+ +F  +   G KP++     +L++C
Sbjct: 424 DKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSAC 483

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +  G     ++++ F +      + Y    V+D +A                        
Sbjct: 484 SHAGLAD--EALYYFELM----QKQYNIKPVMDHFA------------------------ 513

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             LI  Y   G V EA ++  KM   N +P++  +  +++ C   G  D G   F + + 
Sbjct: 514 -CLIDMYLRLGRVEEAFDVVHKM---NFEPNETIWSMLIAGCRSHGKSDLG---FYAAEQ 566

Query: 680 QYGMQPSP-DCYGCLVDMLSRNGYLEDAKHVIEIM 713
              ++P   + Y  L++M    G  +D   V ++M
Sbjct: 567 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLM 601



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 191/390 (48%), Gaps = 23/390 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+   +L+S   G QVH +++K     D  + N+L + YSK     + ++ F  + E+++
Sbjct: 166 LNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDV 225

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +SWT ++S+   NG+    L  ++DM ++G  PNE+ + SV+  C  M   + G  IH  
Sbjct: 226 ISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSL 285

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC------ 224
           ++K+    +  +  S++  Y K G +  A+++F  + + ++  WNAMI G+A        
Sbjct: 286 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAED 345

Query: 225 -----GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
                  G  AL +   +   G+  D +TF + L  CS +   + G QIHG II+S V  
Sbjct: 346 DVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA 405

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + +  AL+ MY K   +D A K F  M  + +ISW ++  GF+ +    Q   LF    
Sbjct: 406 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR 465

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYMFC 393
           L G +PN VTF  +L  C        GL  + L        + N+       + LI M+ 
Sbjct: 466 LVGIKPNQVTFVGVLSACS-----HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYL 520

Query: 394 RCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
           R G VE A  V   ++++ N T W+ L++G
Sbjct: 521 RLGRVEEAFDVVHKMNFEPNETIWSMLIAG 550



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 134/271 (49%), Gaps = 2/271 (0%)

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G  +    +F +++ C           IHG I+KTGF    ++ + L+  Y   G ++++
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +   R ++ +W  +++  V   H   A+ +F  ++EAG  P  Y LG +LN+C+++
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            + +  K +H ++IK   + +  + +++   Y+K   ++ A  AF +     DVI + ++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF-KIIKEKDVISWTSV 231

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I +   +G  + ++  F  M    ++P++ T  SV+SAC     +D G  +  S+  + G
Sbjct: 232 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI-HSLSIKLG 290

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              S      ++ +  + G+L +A+ + E M
Sbjct: 291 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 321



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 2/185 (1%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+  NL +   G Q+HG I+K G   D+ +   L++MY+KCG    
Sbjct: 366 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 425

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R ++SWT +++   ++G     L+++ DM+  G  PN+     V+  C  
Sbjct: 426 ASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH 485

Query: 158 MG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
            G A E  Y       +  I+        +++ Y +LG V  A  V + ++   +   W+
Sbjct: 486 AGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWS 545

Query: 216 AMIGG 220
            +I G
Sbjct: 546 MLIAG 550


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 175/612 (28%), Positives = 314/612 (51%), Gaps = 13/612 (2%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           CV++ A++    +H   L     +N  +   ++N Y   GD++ +   F  I   ++  W
Sbjct: 32  CVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88

Query: 215 NAMIGGYAHCGYGFEALNVVS---SMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHG 270
           N++I  Y   G   EA+N V+   SM   G +  D YTF   L+ C  + D   G+++H 
Sbjct: 89  NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHC 145

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            + +   E  + +  +L+ +Y +   +D A KVF  M  KDV SWN +  GF +N N   
Sbjct: 146 CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAG 205

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              + ++    G + + +T + +L  C +  D+  G+ +    L  G   +  V+++LI 
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ + G ++ A  VFD +  +++ +WN +++ Y  N   +  L+ F  +   G+  +  T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLIKSYVNFGQLDNSFEFSNGA 509
              +     +  +Q++   I G +I+  +     +  ++L+  Y   G ++ +    +  
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRT 568
            R D  SW  +++     G   EA+  ++ + E  +  P++    +I+ + + +GA Q+ 
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
             IH  +IK     +V+VA+ +ID Y KCG ++ A M+       +  + +N +I +   
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA-MSLFYEIPRDTSVPWNAIIASLGI 504

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG   EA+++F  M    ++    TFVS++SACSH GLVD+G   F  M  +YG++PS  
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLK 564

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            YGC+VD+L R GYLE A  ++  MP QP  +++ +LLS C+I+GN ELG  AS++LL +
Sbjct: 565 HYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEV 624

Query: 749 LPKNDAAHVLLS 760
             +N   +VLLS
Sbjct: 625 DSENVGYYVLLS 636



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 277/615 (45%), Gaps = 45/615 (7%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++  G + +I L   LI +Y   G        FD + ++N+ SW  I+SA ++ G
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 125 EFDMGL----KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++   +    +++         P+ +    ++K CVS+     G  +HC   K+  E + 
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDV 156

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+++ Y++ G +  A +VF  +   DVG WNAMI G+   G    AL V++ M  E
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ MD  T  + L  C+   D   G  IH  +++  ++  + + NALI+MY K   +  A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF++M  +D++SWN++   + +N +P      F    L G RP+ +T   L     +L
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 361 LDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            D  +   +    +   +LD++ V  ++L+ M+ + G +  AH+VFD +  K+  +WN L
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           ++GY  N   ++ +  + N+ E   +   N  T+  ++         Q   +IH  +IK 
Sbjct: 397 VTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN 455

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++ + LI  Y   G+L+++        R     W A++++L   G   EA+ +F
Sbjct: 456 SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLF 515

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             ++    K D     ++L++C+                           S ++D   KC
Sbjct: 516 KDMLAERVKADHITFVSLLSACS--------------------------HSGLVDEGQKC 549

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            DI         S        Y  ++      G + +A E+   M    +QP  + + ++
Sbjct: 550 FDIMQKEYGIKPSLKH-----YGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGAL 601

Query: 658 MSACSHKGLVDKGCL 672
           +SAC   G  + G L
Sbjct: 602 LSACKIYGNAELGTL 616



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 238/513 (46%), Gaps = 33/513 (6%)

Query: 29  CGNNQF--CSDSFLRKD----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           C N  F  C    LR D    P  L   +SL       V G +VH  + K+GF +D+F+ 
Sbjct: 107 CVNQLFSMCGGGHLRPDFYTFPPILKACVSL-------VDGKKVHCCVFKMGFEDDVFVA 159

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
            +L+ +YS+ G      +VF +M  +++ SW  ++S   QNG     L +   MK  G  
Sbjct: 160 ASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVK 219

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            +   V S++ VC        G  IH   LK  ++ + FV  +++N Y+K G +  A+ V
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   D+  WN++I  Y        AL     M   GI  D  T ++     S ++D 
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339

Query: 263 DIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            I R I G +IR E ++  + I NAL++MY K   M+ A  VF+++  KD ISWNTL  G
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399

Query: 322 FSENKNPGQTASLFHKFILSGSR---PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           +++N    +    ++  ++   R   PN  T+  ++     +  L  G+++    +    
Sbjct: 400 YTQNGLASEAIDAYN--MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V + LI ++ +CG +E A S+F  +       WN +++    +    + L+ F +
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 439 IWESGVEVNGCTFFYVVETCCRS----ENQQ---MVGQIHGAIIKTGFSSCGYICSSLIK 491
           +    V+ +  TF  ++  C  S    E Q+   ++ + +G  IK      G +   L +
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG--IKPSLKHYGCMVDLLGR 575

Query: 492 SYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
           +    G L+ ++E   N   + D + WGA++SA
Sbjct: 576 A----GYLEKAYELVRNMPIQPDASIWGALLSA 604


>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 631

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 185/658 (28%), Positives = 308/658 (46%), Gaps = 62/658 (9%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEF 163
           M ERNL+SW+ +VS   + G  +  L +++D K      PNE+ + SV+  CV +G S  
Sbjct: 1   MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNEYILASVISACVQVGGS-I 59

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
              +H FA+K   ++N +VG S+++ YAK G++  A  VF  +       W  +I     
Sbjct: 60  DKQMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVK 119

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G    +L + S M    +  D Y   + L  CS +     G+QIHG ++R  +E  +S 
Sbjct: 120 RGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSF 179

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           VN LID Y KS  +  A K+F+ MAD++VISW  +  G+ +N    +   LF +    G 
Sbjct: 180 VNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGR 239

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RP+    + +L  CG L  L+LG Q+   ++      +  + + LI M+ +CG++  A  
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD+++ +N+ ++N L+ GY      ++ +  F  +    +  +  TF  ++        
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
            ++  QIH  I K G S   +  S+LI  Y     L D    F    E+ D+  W AM+ 
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEK-DIVVWNAMLF 418

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
               Q  N EA+ ++  L  +  KP+      +  + + + + Q  +  H  +IK G ++
Sbjct: 419 GYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDS 478

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             +  +++ID YAKCG ++ AR AF                      G V + +  F+ M
Sbjct: 479 HPFTTNSLIDMYAKCGSLEDARKAF----------------------GHVKDGLHYFESM 516

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
              +++P    +  V+S                                    +L R+G 
Sbjct: 517 PKFSIKPGTEHYACVVS------------------------------------LLGRSGK 540

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L +AK  IE MP +P   V+RSLLS CR+ GN ELG++A+EK + +   +  ++ LLS
Sbjct: 541 LYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLS 598



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 273/587 (46%), Gaps = 30/587 (5%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+HG  VK GF  ++++  +L+ +Y+K G       VFD + E++ V+WT I++A ++ G
Sbjct: 62  QMHGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIITACVKRG 121

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             ++ L+++  M+    +P+ + + SV+  C  +   + G  IH   L+  IE +     
Sbjct: 122 RSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEIDVSFVN 181

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            +++FY K G V +A ++F  ++  +V  W AMI GY    +  EA+ +   M   G   
Sbjct: 182 VLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRP 241

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D +   + L  C  +   ++GRQ+H   I+  VE  I + N LIDMY K   ++ A KVF
Sbjct: 242 DGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVF 301

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M  ++V+S+N L  G+S  +   +  +LF +       P+ +TF  LL     L  L+
Sbjct: 302 DDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALE 361

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG Q+  L    G   E    S+LI  + +C  +  A  VFD ++ K+I  WN +L GY 
Sbjct: 362 LGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYT 421

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
               + + LK +  +  S  + N  TF  +        + Q   Q H  IIKTG  S  +
Sbjct: 422 QQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPF 481

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             +SLI  Y   G L++                     A    GH  + +  F S+ +  
Sbjct: 482 TTNSLIDMYAKCGSLED---------------------ARKAFGHVKDGLHYFESMPKFS 520

Query: 545 EKPDEYILGTILNSCAA--IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            KP     GT   +C    +G   +      F+ K+    E  V  +++ A    G+++ 
Sbjct: 521 IKP-----GTEHYACVVSLLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVEL 575

Query: 603 ARMAFDQ--SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
            + A ++  S +S D   Y  L   YA  G+  +  ++ ++M +A +
Sbjct: 576 GKYAAEKAISIDSTDSGSYTLLSNIYASKGMWVDVKKVRERMDIAGV 622



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 186/346 (53%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HGH+++ G   D+   N LI  Y+K G      ++FD MA+RN++SWT +++  +Q
Sbjct: 161 GKQIHGHVLRRGIEIDVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQ 220

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      +K++++M   G  P+ F   S++  C S+ A E G  +H +++K  +E + F+
Sbjct: 221 NSFDREAVKLFIEMTRLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFL 280

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ YAK G +  A +VF  ++  +V  +NA+I GY+      EA+N+   M    +
Sbjct: 281 QNGLIDMYAKCGSLNDARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGML 340

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           +    TF++ L   + ++  ++G+QIH LI +  +   I   +ALID Y K S +  A  
Sbjct: 341 SPSFLTFVSLLGASATLSALELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARL 400

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++M +KD++ WN +  G+++     +   L+ +  +S  +PN VTF+ L      L  
Sbjct: 401 VFDKMTEKDIVVWNAMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLAS 460

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           L  G Q     +  G       T+SLI M+ +CG++E A   F +V
Sbjct: 461 LQHGQQFHNHIIKTGLDSHPFTTNSLIDMYAKCGSLEDARKAFGHV 506



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 128/269 (47%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D       L+   +L++  LG QVH + +K    +DIFLQN LI MY+KCG      +
Sbjct: 240 RPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARK 299

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD+M  RN+VS+  ++       +    + ++ +M+     P+     S++    ++ A
Sbjct: 300 VFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSA 359

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            E G  IH    K  I    F G ++++FY+K   +  A  VF  ++  D+  WNAM+ G
Sbjct: 360 LELGKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFG 419

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y       EAL + + +       +  TF       S +A    G+Q H  II++ ++  
Sbjct: 420 YTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSH 479

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMAD 309
               N+LIDMY K   ++ A K F  + D
Sbjct: 480 PFTTNSLIDMYAKCGSLEDARKAFGHVKD 508


>gi|302775226|ref|XP_002971030.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
 gi|300161012|gb|EFJ27628.1| hypothetical protein SELMODRAFT_94889 [Selaginella moellendorffii]
          Length = 846

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 182/710 (25%), Positives = 344/710 (48%), Gaps = 30/710 (4%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L  + K+   G  VH  ++  G+  D +L N LI MY +C      + VF  ++ +N+
Sbjct: 2   LKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKNV 61

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIH 168
            +WT+++ A   NG F   ++++ +M  +G   +EF   ++++ C ++G +    G +IH
Sbjct: 62  FTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTIH 121

Query: 169 CFALK--IRIEKNPFVGCS--VLNFYAKLGDVAAAERVFYSIS----SDDVGCWNAMIGG 220
               +  +++  NP V CS  +++ YA+ G +  A  +F  +       D+  W AM+  
Sbjct: 122 SRIHQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGLDPDLIAWTAMMTA 181

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G+  EAL +   M  +G+  D++ F+ A+  CS +   + G  +H  ++ S VEC 
Sbjct: 182 YNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLASSVECD 241

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             + NAL++ Y K+  +  +  +F  M  K+V++W+ +   +++N +      LF + +L
Sbjct: 242 GVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGHHEPAVELFREMLL 301

Query: 341 SGSRPNHVTFSIL--LRQCGKLLDLDLGLQLQCLALHCGFLD------EENVTSSLIYMF 392
            G  PN VT ++L  +  C +   LD     Q   LH  F        +  V ++L+ M+
Sbjct: 302 DGIAPNKVTIALLRIVEACDQPDALD-----QARELHTRFFPGAAAAGDVVVATALVNMY 356

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW--ESGVEVNGCT 450
            RCG+V  A +VFD + ++NIT+WN +L  Y  N    + L+ F  +     GV+ +  T
Sbjct: 357 GRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGEGVKPDAIT 416

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNG 508
           F    + C    +     +IH  I ++  S+   +   S+LIK Y N   L  + +  + 
Sbjct: 417 FVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLAGAAQVLDE 476

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
             R ++ SW +M+ A      N  A+ ++ ++   G KPD   + T++ + A +   +R 
Sbjct: 477 MPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAANLHDLKRG 536

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN--DVIVYNTLIMAY 626
              H      GF T   V +A++  Y   GD++ A   F +    +  DV+ +N+++ A+
Sbjct: 537 IEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVTWNSMLSAW 596

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             +GL ++A+  F +M      P + TFV++++AC+         +   ++ +  G+   
Sbjct: 597 NQNGLPNQALRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALAAACGLDSD 656

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            D    L+ M SR G L  A+ V   +  Q +   + ++ + C  +G+ +
Sbjct: 657 TDVANTLLHMYSRCGNLSRARKVFHAIT-QKNVVSWSAMAAACAHNGDAD 705



 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 183/725 (25%), Positives = 340/725 (46%), Gaps = 24/725 (3%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA---- 106
           LSL + + SR+     H   +KL     +     +I  Y++ G+      +F+ M     
Sbjct: 114 LSLGKTIHSRI-----HQQGLKLTSNPTVICSTAMIDAYAQNGHIEQAAEIFERMQLQGL 168

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           + +L++WT +++A  Q G     L ++  M   G  P+ FA  + +  C S+ + E G  
Sbjct: 169 DPDLIAWTAMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTV 228

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   L   +E +  VG ++LNFYAK G V  +  +F S+   +V  W+A++  YA  G+
Sbjct: 229 LHSRLLASSVECDGVVGNALLNFYAKAGLVHESRSLFSSMKVKNVVTWSAIVAAYAQNGH 288

Query: 227 GFEALNVVSSMLFEGITMDKYT--FINALQGCSLVADFDIGRQIHG-LIIRSEVECSISI 283
              A+ +   ML +GI  +K T   +  ++ C      D  R++H      +     + +
Sbjct: 289 HEPAVELFREMLLDGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVV 348

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             AL++MY +   +  A  VF+ M  +++ SWN +   +S N+   +    F   +L G 
Sbjct: 349 ATALVNMYGRCGSVSDAKTVFDEMQHRNITSWNAMLVTYSLNQRSLEALRFFRTMLLEGE 408

Query: 344 --RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVE 399
             +P+ +TF      CG + DL   +++          ++ +V   S+LI M+  C ++ 
Sbjct: 409 GVKPDAITFVSAADACGMMGDLSRAVEIHSRISQSWPSNQTDVVLGSALIKMYGNCRSLA 468

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  V D +   N+ +W  ++     N  +   +  +  +   G + +  T   V++   
Sbjct: 469 GAAQVLDEMPRTNVISWTSMILACEQNEDNEAAIHVYRAMQLHGHKPDPVTMVTVIKAAA 528

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DNSFEFSNGAERLDMAS 516
              + +   + H      GF++   + ++L+  Y   G L   +N F+        D+ +
Sbjct: 529 NLHDLKRGIEFHAQAAAFGFATSTVVGNALVTLYGTSGDLQAAENVFKELLQQSVEDVVT 588

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA-IGAYQRTKSIHPFV 575
           W +M+SA    G  ++A+  F  ++  G  PD+     ILN+CA       +   IH   
Sbjct: 589 WNSMLSAWNQNGLPNQALRTFQRMLHHGRHPDKTTFVNILNACAGDPSKLLQAVKIHALA 648

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
              G +++  VA+ ++  Y++CG++  AR  F  +    +V+ ++ +  A AH+G    A
Sbjct: 649 AACGLDSDTDVANTLLHMYSRCGNLSRARKVF-HAITQKNVVSWSAMAAACAHNGDADGA 707

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           ++ F  M    +QP+  TF+S++S CSH GL+D+      +M S + ++P+   Y CL+D
Sbjct: 708 LQAFRGMLHGGIQPNAVTFISILSGCSHTGLMDEAVSYLYAMSSDHNLKPTVQHYACLLD 767

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +L+R G    A+   E+    P+P  + SLL  C +HG+ E    A++    L P + A 
Sbjct: 768 LLARAGKFHRAE---ELATHLPNPVAWNSLLGACLVHGDAETAARAADTAAKLQPLDCAP 824

Query: 756 HVLLS 760
           +V LS
Sbjct: 825 YVSLS 829



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 178/377 (47%), Gaps = 21/377 (5%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+  G   +LD G  +    +  G+  +  + + LI M+ RC +V  A +VF  VS KN
Sbjct: 1   MLKLHGDAKNLDAGRAVHLQMITSGYHRDRYLCNLLIQMYGRCRSVHDAIAVFHTVSRKN 60

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR------SENQQM 466
           + TW  L+  +  N    + ++ F  +   GV+ +  TF  ++E C        S  + +
Sbjct: 61  VFTWTILIVAHTHNGLFFEAVELFREMDVHGVQSDEFTFSAILEACSNLGLAFLSLGKTI 120

Query: 467 VGQIHGAIIKTGFSSCGYICSS-LIKSYVNFGQLDNSFEFSNGAERL-------DMASWG 518
             +IH   +K   S+   ICS+ +I +Y   G ++ + E     ER+       D+ +W 
Sbjct: 121 HSRIHQQGLKLT-SNPTVICSTAMIDAYAQNGHIEQAAEIF---ERMQLQGLDPDLIAWT 176

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AMM+A    GH  EA+ +F  +   G +PD +     +++C++I + ++   +H  ++  
Sbjct: 177 AMMTAYNQLGHAREALLLFRKMDLQGLEPDRFAFVAAIDACSSIPSLEQGTVLHSRLLAS 236

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               +  V +A+++ YAK G +  +R  F  S    +V+ ++ ++ AYA +G    A+E+
Sbjct: 237 SVECDGVVGNALLNFYAKAGLVHESRSLFS-SMKVKNVVTWSAIVAAYAQNGHHEPAVEL 295

Query: 639 FDKMKLANLQPSQAT--FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           F +M L  + P++ T   + ++ AC     +D+   L                   LV+M
Sbjct: 296 FREMLLDGIAPNKVTIALLRIVEACDQPDALDQARELHTRFFPGAAAAGDVVVATALVNM 355

Query: 697 LSRNGYLEDAKHVIEIM 713
             R G + DAK V + M
Sbjct: 356 YGRCGSVSDAKTVFDEM 372


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/612 (27%), Positives = 308/612 (50%), Gaps = 12/612 (1%)

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S  A     ++H   ++     + F+  ++L  Y +LG    A R+   +   +   +N 
Sbjct: 26  SCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNL 83

Query: 217 MIGGYAHCGYGFEALNVVS-SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           +I  Y+  G    +L   + +    G+  D++T+  AL  CS       G+ +H L +  
Sbjct: 84  LIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLE 143

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +   + + N+L+ MY +   M  A +VF+   ++D +SWN L  G+           +F
Sbjct: 144 GIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVF 203

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLD--LDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
                SG   N      +++ C    D  +D+   +    +  GF  +  + S+++ M+ 
Sbjct: 204 AMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYA 263

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN--CCDADVLKT----FCNIWESGVEVN 447
           + GA+  A ++F +V   N+  +N +++G C +      DVL+     +  +   G+E  
Sbjct: 264 KKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPT 323

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C  + + +   QIHG ++K  F    +I S+LI  Y+N G +++ F    
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFT 383

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + D+ +W AM+S  V       A+T+FH L+ AG KPD + + +++N+CA++   + 
Sbjct: 384 SVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVART 443

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            + I  F  K GF     + ++ I  YA+ GD+  A   F Q   S+D++ ++ +I ++A
Sbjct: 444 GEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRF-QEMESHDIVSWSAVISSHA 502

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG   +A+  F++M  A + P++ TF+ V++ACSH GLVD+G   +++M  +Y + P+ 
Sbjct: 503 QHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTI 562

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
               C+VD+L R G L DA+  I    F   P ++RSLL+ CRIH + E G+  +++++ 
Sbjct: 563 KHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIME 622

Query: 748 LLPKNDAAHVLL 759
           L P + A++V L
Sbjct: 623 LQPSSSASYVNL 634



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 216/425 (50%), Gaps = 19/425 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   V  G    +F+ N+L++MY++CG  G   +VFD   ER+ VSW  +VS  ++
Sbjct: 133 GKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVR 192

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNP 180
            G  D  L+++  M+ +G   N FA+GSV+K C        +   ++H   +K   + + 
Sbjct: 193 AGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDV 252

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY----AHCGYGF--EALNVV 234
           F+  +++  YAK G ++ A  +F S+   +V  +NAMI G     A  G     EAL++ 
Sbjct: 253 FLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLY 312

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           S +   G+   ++TF + ++ C+L  D + G+QIHG +++   +    I +ALID+Y+ S
Sbjct: 313 SEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNS 372

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             M+  F+ F  +  +DV++W  +  G  +N+   +  +LFH+ + +G +P+  T S ++
Sbjct: 373 GCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVM 432

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L     G Q+QC A   GF     + +S I+M+ R G V  A   F  +   +I 
Sbjct: 433 NACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIV 492

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +W+ ++S +  + C  D L+ F  + ++ V  N  TF  V+  C            HG +
Sbjct: 493 SWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACS-----------HGGL 541

Query: 475 IKTGF 479
           +  G 
Sbjct: 542 VDEGL 546



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/603 (23%), Positives = 273/603 (45%), Gaps = 15/603 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH HIV+   +  +FL+N L+A Y + G  G   R+ DEM   N VS+ L++ A  + G+
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 126 FDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            +  L+ +   + + G   + F   + +  C   G    G ++H  ++   I    FV  
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSN 153

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++ YA+ GD+  A +VF +    D   WNA++ GY   G   + L V + M   GI +
Sbjct: 154 SLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGL 213

Query: 245 DKYTFINALQGCSLVAD--FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           + +   + ++ C+   D   DI   +HG ++++  +  + + +A++ MY K   +  A  
Sbjct: 214 NSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVA 273

Query: 303 VFERMADKDVISWNTLFGGFSENKNP------GQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +F+ + D +V+ +N +  G   ++         +  SL+ +    G  P   TFS ++R 
Sbjct: 274 LFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRA 333

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C    D++ G Q+    L   F  ++ + S+LI ++   G +E     F +V  +++ TW
Sbjct: 334 CNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTW 393

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++SG   N      L  F  +  +G++ +  T   V+  C      +   QI     K
Sbjct: 394 TAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATK 453

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           +GF     + +S I  Y   G +  +       E  D+ SW A++S+    G   +A+  
Sbjct: 454 SGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRF 513

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           F+ +V+A   P+E     +L +C+  G      K       +   +  +   + V+D   
Sbjct: 514 FNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLG 573

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATF 654
           + G +  A      S   ++ +++ +L+ +   H  +     + D  ++  LQP S A++
Sbjct: 574 RAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVAD--RIMELQPSSSASY 631

Query: 655 VSV 657
           V++
Sbjct: 632 VNL 634



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 169/374 (45%), Gaps = 20/374 (5%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--- 118
           +   VHG +VK GF +D+FL + ++ MY+K G     + +F  + + N+V +  +++   
Sbjct: 235 IAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLC 294

Query: 119 ---AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
              AA+        L +Y ++++ G  P EF   SV++ C   G  EFG  IH   LK  
Sbjct: 295 RDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHC 354

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            + + F+G ++++ Y   G +    R F S+   DV  W AMI G         AL +  
Sbjct: 355 FQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFH 414

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +L  G+  D +T  + +  C+ +A    G QI     +S      ++ N+ I MY +S 
Sbjct: 415 ELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSG 474

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A + F+ M   D++SW+ +    +++         F++ + +   PN +TF  +L 
Sbjct: 475 DVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLT 534

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY-------MFCRCGAVEMAHS-VFDN 407
            C     +D GL+      +   + EE   S  I        +  R G +  A + + D+
Sbjct: 535 ACSHGGLVDEGLK------YYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDS 588

Query: 408 VSYKNITTWNELLS 421
           + +     W  LL+
Sbjct: 589 IFHDEPVIWRSLLA 602



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 118/290 (40%), Gaps = 45/290 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ DP  ++  ++   +L     G Q+     K GF     + N+ I MY++ G     +
Sbjct: 421 LKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAV 480

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F EM   ++VSW+ ++S+  Q+G     L+ + +M     +PNE     V+  C   G
Sbjct: 481 RRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGG 540

Query: 160 ASEFGYSIHCFALKIRIEKNPFVG-CS-VLNFYAKLGDVAAAER-VFYSISSDDVGCWNA 216
             + G   +   +K     +P +  C+ V++   + G +A AE  +  SI  D+   W +
Sbjct: 541 LVDEGLKYY-ETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRS 599

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +                                   L  C +  D + G+ +   I+  +
Sbjct: 600 L-----------------------------------LASCRIHRDMERGQLVADRIMELQ 624

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISWNTLFGG 321
              S S VN L ++Y+ +  +  A K+ + M ++ V     +SW  L  G
Sbjct: 625 PSSSASYVN-LYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSG 673


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 191/718 (26%), Positives = 339/718 (47%), Gaps = 7/718 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  L +  + +S  LG +VH  I K       F+ + L+ MY  CG        FD M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-VSMGASEFGYS 166
           ++ ++W  ++ A  Q G+ +  L ++  M+  G  P      +V+  C       E G  
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH       +E + +V  ++L+ Y K   V  A +VF  I    V  WNAMI  YA   +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIV 284
             +A+ V  +ML EG+  ++ TFI  L  CS + D ++ + +   +   E +     S  
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL++ Y     ++ AF+ F R    ++I    +   +++ +   +   LF   +L G +
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + +    +L  C     L+ G  +        F    N  ++LI M+ +CG++E A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++ ++++ +WN +++ +  +    + L     +   GV+ +  +F   +  C  SE  
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEAL 420

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                IH  I+++G  +   + ++++  Y +    D++       +  D  SW AM++A 
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAY 480

Query: 525 VHQGH-NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
             Q   + EA+ +F  +   G  PD       L++CAA  +    K +H  + + G  + 
Sbjct: 481 AAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESN 540

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + VA+AV++ YAK G +  AR  F +     DVI +N +I A+A HG   + +  F +M 
Sbjct: 541 MTVANAVLNMYAKSGSLVLARKMFGK-MPLPDVISWNGMISAFAQHGHADQVLRFFRRMN 599

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG-MQPSPDCYGCLVDMLSRNGY 702
                P+  TFVSV+SACSH GLV  G  LF S+   +  + P  + Y C+VD+++R G 
Sbjct: 600 HEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGK 659

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L+ A+  I   P +P   ++ ++L   ++H + E    ++E L+ L P   AA+V+LS
Sbjct: 660 LDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLS 717



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 28/337 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I    +L L    ++   G  +H  IV+ G   D+ L N ++ MY  C       
Sbjct: 400 VKADKISFVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDAS 459

Query: 100 RVFDEMAERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           RVF  M  R+ VSW  +++A A Q       L ++  M+ +GFMP+  +  + +  C + 
Sbjct: 460 RVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQ 519

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +   G  +H    +  +E N  V  +VLN YAK G +  A ++F  +   DV  WN MI
Sbjct: 520 ASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMI 579

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             +A  G+  + L     M  EG   +  TF++ +  CS           HG +++  V+
Sbjct: 580 SAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQ 628

Query: 279 CSISIVN-------------ALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSE 324
             +S+++              ++D+  ++  +D A K       K D +  +T+ G    
Sbjct: 629 LFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKV 688

Query: 325 NKNPGQT-ASLFHKFILSGSR-PNHVTFSILLRQCGK 359
           +K+  +   S  H   L+  R   +V  S L  + GK
Sbjct: 689 HKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGK 725


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/655 (26%), Positives = 314/655 (47%), Gaps = 42/655 (6%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+     +V+  C S G    G ++H      R E++  VG ++++ Y K   +  A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 203 FYSIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           F S+     +V  WNAMI  YA  G+  EAL +   M  +G+  D  TF++ L  CS +A
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               GR+IH  +  S ++   S+ NAL+ MY +   +  A ++F+ +  +D  SWN +  
Sbjct: 125 Q---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
             S++ +      +F K +    +PN  T+  ++        L  G ++    +  GF  
Sbjct: 182 AHSQSGDWSGALRIF-KEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDS 240

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V ++LI M+ +CG+   A  VFD +  +++ +WN ++  Y  N    + L+ +  + 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLD 300

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G +    TF  ++  C   +       +H  I++ G  S   + ++L+  Y   G L+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEA--------------------------- 533
            + +  N  +  D  +W  ++ A    G+  +A                           
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420

Query: 534 -------VTIFHSLV-EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
                  + IF  +   AG KPD      +L +CA++G     K++H  + +    + V 
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVV 480

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V + +I+ YA+CG ++ A   F  +     V+ +  ++ A++ +G  +EA+++F +M L 
Sbjct: 481 VTNTLINMYARCGSLEEAERLF-AAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLE 539

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P   T+ S++  C+H G +++G   F  M   +G+ P+ D +  +VD+L R+G L D
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFD 599

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           AK ++E MPF+P P  + + L+ CRIHG  ELGE A+E++  L P + A ++ +S
Sbjct: 600 AKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMS 654



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 164/667 (24%), Positives = 288/667 (43%), Gaps = 52/667 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAA 120
           G  +H  I    F  D  + N LI+MY KC        VF+ M   +RN+VSW  +++A 
Sbjct: 26  GRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAY 85

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG     L +Y  M   G   +     SV+  C S+     G  IH       ++   
Sbjct: 86  AQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDSFQ 142

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  +++  YA+ G V  A+R+F S+ + D   WNA+I  ++  G    AL +   M  +
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD 202

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  +  T+IN + G S       GR+IH  I+ +  +  + +  ALI+MY K      A
Sbjct: 203 -MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEA 261

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF++M  +D++SWN + G + +N +  +   L+ K  + G +    TF  +L  C  +
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSV 321

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE--------------------- 399
             L  G  +    L  G   E  V ++L+ M+ +CG++E                     
Sbjct: 322 KALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLI 381

Query: 400 -------------MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVE 445
                         A  VFD +  ++   WN +++ Y  N C    +K F  +   +G++
Sbjct: 382 GAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLK 441

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +  TF  V+E C        V  +H  I ++   S   + ++LI  Y   G L+ +   
Sbjct: 442 PDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL 501

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
              A+   + SW AM++A    G   EA+ +F  +   G KPD+    +IL  C   G+ 
Sbjct: 502 FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSL 561

Query: 566 QRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           ++       + +L G        +A++D   + G +  A+   +      D + + T + 
Sbjct: 562 EQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLT 621

Query: 625 AYAHHG---LVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           A   HG   L   A E     ++  L PS  A ++++ +  +  G+ +K   + K M+ +
Sbjct: 622 ACRIHGKLELGEAAAE-----RVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEER 676

Query: 681 YGMQPSP 687
            G++  P
Sbjct: 677 -GLKKLP 682



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/326 (23%), Positives = 142/326 (43%), Gaps = 50/326 (15%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF- 95
           + F R    F++  L    ++K+   G  VH HI++ G  +++ +   L+ MY+KCG   
Sbjct: 302 EGFKRTKATFVS-ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 96  ---------------------------GWG------LRVFDEMAERNLVSWTLIVSAAIQ 122
                                      G+G       +VFD +  R+ + W  +++  +Q
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQ 420

Query: 123 NGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG     +K++ +M    G  P+     +V++ C S+G      ++H    +  +E N  
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVV 480

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++N YA+ G +  AER+F +     V  W AM+  ++  G   EAL++   M  EG
Sbjct: 481 VTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG 540

Query: 242 ITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSEVECSISIVNALIDMYIKS 294
           +  D  T+ + L  C+     + G        ++HGL   ++         A++D+  +S
Sbjct: 541 VKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTAD------HFAAMVDLLGRS 594

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLF 319
             +  A ++ E M  + D ++W T  
Sbjct: 595 GRLFDAKELLESMPFEPDPVAWMTFL 620



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD     T+L SC++ G     +++H  +    F  +  V +A+I  Y KC  +  AR
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             F+   +   +V+ +N +I AYA +G  +EA+ ++ +M L  L     TFVSV+ ACS 
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 664 --KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             +G      + +  +DS   +         LV M +R G + DAK + +
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLA------NALVTMYARFGSVGDAKRMFQ 166


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 174/614 (28%), Positives = 304/614 (49%), Gaps = 4/614 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S ++ C S    + G  IH        + N  +  S++ FY    D A+AE VF +    
Sbjct: 8   SALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCP 67

Query: 210 -DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQ 267
            DV  WNA++  Y +     EAL +   +     +  D YT+   L+ C  +     GR+
Sbjct: 68  LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRR 127

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IH  ++++ +   + + ++L++MY K      A K+F+    +DV  WN +   + ++  
Sbjct: 128 IHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGK 187

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                  F K    G  PN VTF++++  C +LL+L+ G ++    +    L +  V S+
Sbjct: 188 AEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSA 247

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ +CG +EMA  VF+ +  KN  TWN +++GY         ++    + + G +  
Sbjct: 248 LVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPT 307

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++    RS   +    IHG I++       +I  SLI  Y   G + ++     
Sbjct: 308 LMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFR 367

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + ++ SW  M+S  V  G++ +A+ I+ ++ E   KPD     + L++C+ + A  +
Sbjct: 368 TISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDK 427

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            + +H  +I         V  A++D YAKCGD+  AR  F Q     D++ + ++I AY 
Sbjct: 428 GRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQ-LPKRDLVSWTSMIFAYG 486

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG  SEA+ +FD+M+  N++    TF++V+SACSH GLVD+G + F  M  QY ++P  
Sbjct: 487 SHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGI 546

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKELGEWASEKLL 746
           + Y CL+D+L R G L +A  +++      S   +  +L S C +H N  LG    + L+
Sbjct: 547 EHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLI 606

Query: 747 LLLPKNDAAHVLLS 760
            + P + + ++LLS
Sbjct: 607 EVDPDDPSTYILLS 620



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 237/528 (44%), Gaps = 32/528 (6%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           +Q   +S++R D       L     L   + G ++H H++K G   D+F+ ++L+ MY+K
Sbjct: 94  DQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAK 153

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C  F   +++FDE  +R++  W  ++S   ++G+ +M LK +  MK  GF PN      V
Sbjct: 154 CDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVV 213

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +   E G  +H   ++ RI  + FV  ++++ Y K G +  A+ VF  I   + 
Sbjct: 214 VSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNA 273

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI GY+  G     + ++  M  EG      T  + +   S       G+ IHG 
Sbjct: 274 ITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGY 333

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I+R+ ++  I I  +LID Y K   +  A  +F  ++  +V+SWN +  G     N  Q 
Sbjct: 334 ILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQA 393

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             ++        +P+ +TFS  L  C +L  LD G +L    ++      E V  +L+ M
Sbjct: 394 LHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDM 453

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +CG V+ A  +F  +  +++ +W  ++  Y  +   ++ L+ F  + +  V  +  TF
Sbjct: 454 YAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTF 513

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V+  C            H  ++  G              Y+ F ++   ++   G E 
Sbjct: 514 LAVLSACS-----------HAGLVDEG--------------YMYFNEMVVQYDIKPGIEH 548

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
                +  ++  L   G  HEA  I     E   + D  +L T+ ++C
Sbjct: 549 -----YSCLIDLLGRAGRLHEAYEILQRSKET--RSDIGLLSTLFSAC 589



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 171/399 (42%), Gaps = 21/399 (5%)

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           ++VT    LR C     L  G  +      CGF     ++ SLI  +  C     A  VF
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 406 D-NVSYKNITTWNELLSGYCFNCCDADVLKTF----CNIWESGVEVNGCTFFYVVETCCR 460
             N    +++ WN LLS Y  N    + L+ F    CN   S V  +  T+  V++ C  
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCN---SYVRPDFYTYPVVLKACGG 118

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                   +IH  ++KTG     ++ SSL+  Y    Q  ++ +  +   + D+  W A+
Sbjct: 119 LGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAV 178

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G    A+  F  + E G +P+      +++SC  +   +R K +H  +I+   
Sbjct: 179 ISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRI 238

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             + +V SA++D Y KCG ++ A+  F++    N  I +N +I  Y+  G     +E+  
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKN-AITWNAMITGYSLKGDSRSCIELLM 297

Query: 641 KMKLANLQPSQATFVSVMSACSHK-----GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +M     +P+  T  S++ A S       G    G +L   +D    +  S      L+D
Sbjct: 298 RMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVS------LID 351

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
              + GY+  A+ +   +  +     +  ++SG  + GN
Sbjct: 352 FYFKCGYVSSAETIFRTIS-KNEVVSWNVMISGHVMVGN 389


>gi|302782183|ref|XP_002972865.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
 gi|300159466|gb|EFJ26086.1| hypothetical protein SELMODRAFT_51647 [Selaginella moellendorffii]
          Length = 597

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 166/603 (27%), Positives = 306/603 (50%), Gaps = 16/603 (2%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +HC+  +     + +V   ++  Y K G V  A  VF SI + +V  WN +I  +A  G+
Sbjct: 1   LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60

Query: 227 GFEALNVVSSMLFE--GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
              ++ +   M+ E  GI   + TF++AL+    +A+   GR+IH L I   +E   ++ 
Sbjct: 61  PERSVALFWRMIREEPGIIPTRITFLHALEKLKNLAE---GRKIHELAITVGLESDPAVG 117

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            A++ MY KS  +  A +VF+++  +DV++W  L   +++N +  +   L+      G  
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVA 177

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TF+I++  C +L  LD+G+ +       G      V +SLI ++  C  +  A  +
Sbjct: 178 PNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERI 237

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSEN 463
           F  +  ++  +WN +++ Y  N    D +  +  +   G V+++  TF  V+  C   E+
Sbjct: 238 FQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQED 297

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
                 IH   I  G  S   + S+ +  Y   G ++ S       E  D  +W A+++A
Sbjct: 298 LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357

Query: 524 LVHQGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           L   G +  A+  +  ++  +  +P+E    ++L +C+   A +  K IH  ++  G   
Sbjct: 358 LAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSF--ADEGIK-IHQHIVDSGIVH 414

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQ------SFNSNDVIVYNTLIMAYAHHGLVSEAM 636
              +++A+ + YAKCG +  AR  F        SF S + + +  +I A A HG + EA+
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEAL 474

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E+F +M+L   +PS+  F+S++  CSH G +++G   F +M   +G+ P  + YGCL+D+
Sbjct: 475 ELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLGHFLAMIQDHGLAPRVEHYGCLIDL 534

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L R G+L+ A+ +++ MPF+P    + + L  CR+H +++  E A+ ++  L P+  A +
Sbjct: 535 LGRGGHLDLAQDLVDQMPFEPDARAWSNFLGSCRLHSDRDRAEAAAIRVFELEPEKAAIY 594

Query: 757 VLL 759
           V L
Sbjct: 595 VSL 597



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 141/513 (27%), Positives = 249/513 (48%), Gaps = 17/513 (3%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  I + G  +  ++ N ++ MY KCG       VF  +  RN+ SW +I++A  QNG 
Sbjct: 1   LHCWIRERGHGSSTYVSNMIVQMYGKCGSVDDAWIVFSSIQARNVFSWNMIIAAFAQNGH 60

Query: 126 FDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
            +  + ++  M  +  G +P        ++   ++     G  IH  A+ + +E +P VG
Sbjct: 61  PERSVALFWRMIREEPGIIPTRITFLHALEKLKNLAE---GRKIHELAITVGLESDPAVG 117

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K   +A A+RVF  +   DV  W A+I  Y   G+  EAL++ SSM  +G+ 
Sbjct: 118 TAIVTMYGKSRSLADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVA 177

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            ++YTF   +  C+ +   D+G  IH  I  + +E  I + N+LI++Y     +  A ++
Sbjct: 178 PNQYTFTIVIDACAELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERI 237

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLD 362
           F+RM  +  +SWN++   ++ N +PG    L+ +    GS + + VTF  +L  C    D
Sbjct: 238 FQRMPRRSSVSWNSMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQED 297

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +   A+  G      + S+ + M+ RCG+VE + + F+ +  K+   W+ +++ 
Sbjct: 298 LAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAA 357

Query: 423 YCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
              N   +  L  +   IW S    N  TF  V+E C  ++      +IH  I+ +G   
Sbjct: 358 LAQNGESSSALHFYRRMIWSSSARPNEATFISVLEACSFADEGI---KIHQHIVDSGIVH 414

Query: 482 CGYICSSLIKSYVNFGQLDNSFEF------SNGA-ERLDMASWGAMMSALVHQGHNHEAV 534
              I +++   Y   G+LD + E       S G+ +  +  SW  M+SAL   G   EA+
Sbjct: 415 STMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEAL 474

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
            +F  +   G KP E +  +IL+ C+  G  ++
Sbjct: 475 ELFREMRLEGGKPSEIVFISILHGCSHSGTMEQ 507



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 200/435 (45%), Gaps = 15/435 (3%)

Query: 39  FLRKDPIFLAKSLSLS---ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
            +R++P  +   ++     E LK+   G ++H   + +G  +D  +   ++ MY K    
Sbjct: 71  MIREEPGIIPTRITFLHALEKLKNLAEGRKIHELAITVGLESDPAVGTAIVTMYGKSRSL 130

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               RVFD++  R++V+WT +++A  QNG  +  L +Y  M  +G  PN++    V+  C
Sbjct: 131 ADAKRVFDQLKRRDVVAWTALITAYTQNGHCEEALDLYSSMDPDGVAPNQYTFTIVIDAC 190

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             +G  + G +IH       +E    V  S++N Y     +  AER+F  +       WN
Sbjct: 191 AELGRLDVGIAIHARITAAGLESWIEVANSLINLYGNCKRLRDAERIFQRMPRRSSVSWN 250

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           +MI  YAH G+  +A+++   M  +G + +D  TF+N L  C    D   GR IH   I 
Sbjct: 251 SMIAAYAHNGHPGDAIDLYKRMRGDGSVKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIA 310

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
             +   + + +A + MY +   ++ +   FERM  KD ++W+ +    ++N         
Sbjct: 311 RGLGSHLVLASAAVSMYGRCGSVEESMATFERMEIKDGVAWSAVIAALAQNGESSSALHF 370

Query: 335 FHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           + + I S S RPN  TF  +L  C      D G+++    +  G +    +++++  M+ 
Sbjct: 371 YRRMIWSSSARPNEATFISVLEACSF---ADEGIKIHQHIVDSGIVHSTMISTAIFNMYA 427

Query: 394 RCGAVEMAHSVFDNVSYK-------NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +CG ++ A  +F ++          N  +W  ++S    +    + L+ F  +   G + 
Sbjct: 428 KCGRLDRAREIFSSMRASRGSFQSANDVSWMNMISALARHGSIDEALELFREMRLEGGKP 487

Query: 447 NGCTFFYVVETCCRS 461
           +   F  ++  C  S
Sbjct: 488 SEIVFISILHGCSHS 502



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 27/301 (8%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  ++ DP+     L    + +    G  +H   +  G  + + L +  ++MY +CG   
Sbjct: 275 DGSVKLDPVTFVNVLGACYSQEDLAAGRSIHRDAIARGLGSHLVLASAAVSMYGRCGSVE 334

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVC 155
             +  F+ M  ++ V+W+ +++A  QNGE    L  Y  M  ++   PNE    SV++ C
Sbjct: 335 ESMATFERMEIKDGVAWSAVIAALAQNGESSSALHFYRRMIWSSSARPNEATFISVLEAC 394

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--------S 207
                ++ G  IH   +   I  +  +  ++ N YAK G +  A  +F S+        S
Sbjct: 395 ---SFADEGIKIHQHIVDSGIVHSTMISTAIFNMYAKCGRLDRAREIFSSMRASRGSFQS 451

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR- 266
           ++DV  W  MI   A  G   EAL +   M  EG    +  FI+ L GCS     + G  
Sbjct: 452 ANDV-SWMNMISALARHGSIDEALELFREMRLEGGKPSEIVFISILHGCSHSGTMEQGLG 510

Query: 267 ------QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
                 Q HGL  R E          LID+  +   +D A  + ++M  + D  +W+   
Sbjct: 511 HFLAMIQDHGLAPRVEH------YGCLIDLLGRGGHLDLAQDLVDQMPFEPDARAWSNFL 564

Query: 320 G 320
           G
Sbjct: 565 G 565


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 159/468 (33%), Positives = 261/468 (55%), Gaps = 11/468 (2%)

Query: 303 VFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +F +  DK +V SWN++    + + +  +    F        +PN  TF   ++ C  LL
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL  G Q    AL  GF  +  V+S+L+ M+ +CG +  A ++FD +S++NI +W  +++
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226

Query: 422 GYCFNCCDADVLKTFCN--IWESGVE------VNGCTFFYVVETCCRSENQQMVGQIHGA 473
           GY  N      L  F    + ESG E      V+      V+  C R   + +   +HG 
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +IK GF     + ++L+ +Y   G+L  S    +G    D+ SW ++++     G + E+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 534 VTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + IFH +V+ GE   +   L  +L +CA  G+ +  K IH  VIK+G  + V+V +++ID
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KCG ++ AR AFD+    N V  ++ ++  Y  HG   EA+E+F +M +A ++P+  
Sbjct: 407 MYCKCGKVEMARKAFDRMREKN-VKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TFVSV++ACSH GL+++G   FK+M  ++ ++P  + YGC+VD+L R GYL++A  +I+ 
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 525

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           M  +P   V+ +LL  CR+H N +LGE ++ KL  L PKN   +VLLS
Sbjct: 526 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 573



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 206/460 (44%), Gaps = 42/460 (9%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           N+ SW  +++   ++G+    L+ +  M+     PN       +K C ++     G   H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
             AL    E + FV  ++++ Y+K G++  A  +F  IS  ++  W +MI GY       
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 229 EALNVVSSMLFE--------GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            AL +    L E         + +D    ++ L  CS V++  I   +HG +I+   E  
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + + N L+D Y K   +  + +VF+ MA++DVISWN++   +++N    ++  +FH+ + 
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355

Query: 341 SGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G    N VT S +L  C       LG  +    +  G      V +S+I M+C+CG VE
Sbjct: 356 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 415

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           MA   FD +  KN+ +W+ +++GY  +    + L+ F  +  +GV+ N  TF  V+  C 
Sbjct: 416 MARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                      H  +++ G+                F  + + F+   G E      +G 
Sbjct: 476 -----------HAGLLEEGWHW--------------FKAMSHEFDVEPGVEH-----YGC 505

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           M+  L   G+  EA  +   +     +PD  + G +L +C
Sbjct: 506 MVDLLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGAC 542



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 161/304 (52%), Gaps = 9/304 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q H   +  GF  D+F+ + L+ MYSKCG       +FDE++ RN+VSWT +++  +Q
Sbjct: 171 GRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ 230

Query: 123 NGEFDMGLKMYVD--MKTNG------FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           N +    L ++ +  ++ +G         +  A+ SV+  C  +        +H F +K 
Sbjct: 231 NDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKR 290

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +  V  ++++ YAK G++  + RVF  ++  DV  WN++I  YA  G   E++ + 
Sbjct: 291 GFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIF 350

Query: 235 SSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             M+ +G I  +  T    L  C+      +G+ IH  +I+  +E ++ +  ++IDMY K
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A K F+RM +K+V SW+ +  G+  + +  +   +F++  ++G +PN++TF  +
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 470

Query: 354 LRQC 357
           L  C
Sbjct: 471 LAAC 474



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 224/468 (47%), Gaps = 20/468 (4%)

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   +V  WN++I   A  G   EAL   SSM    +  ++ TF  A++ CS + D   G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           RQ H   +    E  + + +AL+DMY K   +  A  +F+ ++ ++++SW ++  G+ +N
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231

Query: 326 KNPGQTASLFHKFIL--SGSRP------NHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
            +  +   LF +F++  SGS        + +    +L  C ++ +  +   +    +  G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           F  +  V ++L+  + +CG + ++  VFD ++ +++ +WN +++ Y  N    + ++ F 
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFH 351

Query: 438 NIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            + + G +  N  T   V+  C  S +Q++   IH  +IK G  S  ++ +S+I  Y   
Sbjct: 352 RMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKC 411

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+++ + +  +     ++ SW AM++     GH  EA+ +F+ +  AG KP+     ++L
Sbjct: 412 GKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVL 471

Query: 557 NSCAAIG----AYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
            +C+  G     +   K++ H F ++ G   E Y    ++D   + G +K A        
Sbjct: 472 AACSHAGLLEEGWHWFKAMSHEFDVEPG--VEHY--GCMVDLLGRAGYLKEAFDLIKGMK 527

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
              D +V+  L+ A   H  V +  EI  + KL  L P    +  ++S
Sbjct: 528 LRPDFVVWGALLGACRMHKNV-DLGEISAR-KLFELDPKNCGYYVLLS 573



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           DPI +   LS    +  + +   VHG ++K GF  D+ ++N L+  Y+KCG  G   RVF
Sbjct: 260 DPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVF 319

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGAS 161
           D MAER+++SW  I++   QNG     ++++  M  +G +  N   + +V+  C   G+ 
Sbjct: 320 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ 379

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  IH   +K+ +E N FVG S+++ Y K G V  A + F  +   +V  W+AM+ GY
Sbjct: 380 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 439

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECS 280
              G+  EAL V   M   G+  +  TF++ L  CS     + G      +    +VE  
Sbjct: 440 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG 499

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
           +     ++D+  ++  +  AF + + M  + D + W  L G    +KN
Sbjct: 500 VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKN 547



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 8/194 (4%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           ++   D  +  + + L+  L    +  S+ LG  +H  ++K+G  +++F+  ++I MY K
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      + FD M E+N+ SW+ +V+    +G     L+++ +M   G  PN     SV
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSV 470

Query: 152 MKVCVSMGASEFGYSIHCF-ALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS 207
           +  C   G  E G+  H F A+    +  P V   GC V +   + G +  A  +   + 
Sbjct: 471 LAACSHAGLLEEGW--HWFKAMSHEFDVEPGVEHYGCMV-DLLGRAGYLKEAFDLIKGMK 527

Query: 208 -SDDVGCWNAMIGG 220
              D   W A++G 
Sbjct: 528 LRPDFVVWGALLGA 541


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 175/612 (28%), Positives = 314/612 (51%), Gaps = 13/612 (2%)

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           CV++ A++    +H   L     +N  +   ++N Y   GD++ +   F  I   ++  W
Sbjct: 32  CVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSW 88

Query: 215 NAMIGGYAHCGYGFEALNVVS---SMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHG 270
           N++I  Y   G   EA+N V+   SM   G +  D YTF   L+ C  + D   G+++H 
Sbjct: 89  NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHC 145

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            + +   E  + +  +L+ +Y +   +D A KVF  M  KDV SWN +  GF +N N   
Sbjct: 146 CVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAG 205

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              + ++    G + + +T + +L  C +  D+  G+ +    L  G   +  V+++LI 
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ + G ++ A  VFD +  +++ +WN +++ Y  N   +  L+ F  +   G+  +  T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLIKSYVNFGQLDNSFEFSNGA 509
              +     +  +Q++   I G +I+  +     +  ++L+  Y   G ++ +    +  
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRT 568
            R D  SW  +++     G   EA+  ++ + E  +  P++    +I+ + + +GA Q+ 
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
             IH  +IK     +V+VA+ +ID Y KCG ++ A M+       +  + +N +I +   
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA-MSLFYEIPRDTSVPWNAIIASLGI 504

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG   EA+++F  M    ++    TFVS++SACSH GLVD+G   F  M  +YG++PS  
Sbjct: 505 HGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLK 564

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            YGC+VD+L R GYLE A  ++  MP QP  +++ +LLS C+I+GN ELG  AS++LL +
Sbjct: 565 HYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEV 624

Query: 749 LPKNDAAHVLLS 760
             +N   +VLLS
Sbjct: 625 DSENVGYYVLLS 636



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 150/615 (24%), Positives = 277/615 (45%), Gaps = 45/615 (7%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++  G + +I L   LI +Y   G        FD + ++N+ SW  I+SA ++ G
Sbjct: 40  KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99

Query: 125 EFDMGL----KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++   +    +++         P+ +    ++K CVS+     G  +HC   K+  E + 
Sbjct: 100 KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDV 156

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+++ Y++ G +  A +VF  +   DVG WNAMI G+   G    AL V++ M  E
Sbjct: 157 FVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGE 216

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ MD  T  + L  C+   D   G  IH  +++  ++  + + NALI+MY K   +  A
Sbjct: 217 GVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF++M  +D++SWN++   + +N +P      F    L G RP+ +T   L     +L
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336

Query: 361 LDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            D  +   +    +   +LD++ V  ++L+ M+ + G +  AH+VFD +  K+  +WN L
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           ++GY  N   ++ +  + N+ E   +   N  T+  ++         Q   +IH  +IK 
Sbjct: 397 VTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN 455

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++ + LI  Y   G+L+++        R     W A++++L   G   EA+ +F
Sbjct: 456 SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLF 515

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             ++    K D     ++L++C+                           S ++D   KC
Sbjct: 516 KDMLAERVKADHITFVSLLSACS--------------------------HSGLVDEGQKC 549

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
            DI         S        Y  ++      G + +A E+   M    +QP  + + ++
Sbjct: 550 FDIMQKEYGIKPSLKH-----YGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGAL 601

Query: 658 MSACSHKGLVDKGCL 672
           +SAC   G  + G L
Sbjct: 602 LSACKIYGNAELGTL 616



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/513 (26%), Positives = 238/513 (46%), Gaps = 33/513 (6%)

Query: 29  CGNNQF--CSDSFLRKD----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           C N  F  C    LR D    P  L   +SL       V G +VH  + K+GF +D+F+ 
Sbjct: 107 CVNQLFSMCGGGHLRPDFYTFPPILKACVSL-------VDGKKVHCCVFKMGFEDDVFVA 159

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
            +L+ +YS+ G      +VF +M  +++ SW  ++S   QNG     L +   MK  G  
Sbjct: 160 ASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVK 219

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            +   V S++ VC        G  IH   LK  ++ + FV  +++N Y+K G +  A+ V
Sbjct: 220 MDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMV 279

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   D+  WN++I  Y        AL     M   GI  D  T ++     S ++D 
Sbjct: 280 FDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQ 339

Query: 263 DIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            I R I G +IR E ++  + I NAL++MY K   M+ A  VF+++  KD ISWNTL  G
Sbjct: 340 RISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTG 399

Query: 322 FSENKNPGQTASLFHKFILSGSR---PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           +++N    +    ++  ++   R   PN  T+  ++     +  L  G+++    +    
Sbjct: 400 YTQNGLASEAIDAYN--MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSL 457

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V + LI ++ +CG +E A S+F  +       WN +++    +    + L+ F +
Sbjct: 458 YLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD 517

Query: 439 IWESGVEVNGCTFFYVVETCCRS----ENQQ---MVGQIHGAIIKTGFSSCGYICSSLIK 491
           +    V+ +  TF  ++  C  S    E Q+   ++ + +G  IK      G +   L +
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYG--IKPSLKHYGCMVDLLGR 575

Query: 492 SYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
           +    G L+ ++E   N   + D + WGA++SA
Sbjct: 576 A----GYLEKAYELVRNMPIQPDASIWGALLSA 604


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 270/506 (53%), Gaps = 12/506 (2%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R IHG I+++     + ++  L+++Y K   M+ A KVF+ +  ++V +W TL  G+ +
Sbjct: 83  ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 142

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N +P     LF K + +G+ P++ T  I+L  C  L  ++ G Q+    +      + ++
Sbjct: 143 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 202

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            +SL   + +   +E A   F  +  K++ +W  ++S  C N   A  L  F ++   G+
Sbjct: 203 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 262

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + N  T   V+  CC      +  QIH   IK G+ S   I +S++  Y+  G L  + +
Sbjct: 263 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 322

Query: 505 FSNGAERLDMASWGAMMSA-----------LVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G E L++ +W AM++            +        A+ +F  L  +G KPD +   
Sbjct: 323 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 382

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L+ C+ + A ++ + IH  +IK G   +V V +A++  Y KCG I  A  AF +   S
Sbjct: 383 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLE-MPS 441

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
             +I + ++I  +A HGL  +A+++F+ M+L  ++P+Q TFV V+SACSH GL D+    
Sbjct: 442 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 501

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F+ M  QY ++P  D + CL+DM  R G +E+A  V+  M F+P+ T++  L++GCR HG
Sbjct: 502 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHG 561

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLL 759
             +LG +A+E+LL L PK+   +V L
Sbjct: 562 KSDLGFYAAEQLLKLKPKDVETYVSL 587



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 217/416 (52%), Gaps = 14/416 (3%)

Query: 60  RVLGTQ---VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           R L T+   +HGHIVK GF  D+F+   L+ +YSKCG      +VFD +  RN+ +WT +
Sbjct: 77  RNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTL 136

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  +QN    + L++++ M   G  P+ + +G V+  C S+ + EFG  +H + +K  I
Sbjct: 137 LTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHI 196

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + +  +G S+ +FY+K   +  A + F  I   DV  W ++I      G    +L+    
Sbjct: 197 DFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMD 256

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML +G+  ++YT  + L  C ++   D+G QIH L I+     SI I N+++ +Y+K   
Sbjct: 257 MLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGW 316

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSE-----------NKNPGQTASLFHKFILSGSRP 345
           +  A K+FE M   ++++WN +  G ++           +K+     ++F K   SG +P
Sbjct: 317 LIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKP 376

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  TFS +L  C  L+ L+ G Q+    +  G L +  V ++L+ M+ +CG+++ A   F
Sbjct: 377 DLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAF 436

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +  + + +W  +++G+  +      L+ F ++   G++ N  TF  V+  C  +
Sbjct: 437 LEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHA 492



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 263/575 (45%), Gaps = 49/575 (8%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C+    +     IH   +K    ++ FV   ++N Y+K G + +A +VF ++   +
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W  ++ GY    +   AL +   ML  G     YT    L  CS +   + G+Q+H 
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +I+  ++   SI N+L   Y K   +++A K F+ + +KDVISW ++     +N    +
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           + S F   +  G +PN  T + +L  C  +L LDLG Q+  L++  G+     + +S++Y
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADV---------LKTFCNI 439
           ++ +CG +  A  +F+ +   N+ TWN +++G+    +  + DV         L  F  +
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
           + SG++ +  TF  V+  C      +   QIHG IIK+G  +   + ++L+  Y   G +
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSI 429

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D + +         M SW +M++     G + +A+ +F  +   G KP++     +L++C
Sbjct: 430 DKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSAC 489

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +  G     ++++ F +      + Y    V+D +A                        
Sbjct: 490 SHAGLAD--EALYYFELM----QKQYNIKPVMDHFA------------------------ 519

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             LI  Y   G V EA ++  KM   N +P++  +  +++ C   G  D G   F + + 
Sbjct: 520 -CLIDMYLRLGRVEEAFDVVHKM---NFEPNETIWSMLIAGCRSHGKSDLG---FYAAEQ 572

Query: 680 QYGMQPSP-DCYGCLVDMLSRNGYLEDAKHVIEIM 713
              ++P   + Y  L++M    G  +D   V ++M
Sbjct: 573 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLM 607



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 189/385 (49%), Gaps = 23/385 (5%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L+S   G QVH +++K     D  + N+L + YSK     + ++ F  + E++++SWT 
Sbjct: 177 SLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTS 236

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S+   NG+    L  ++DM ++G  PNE+ + SV+  C  M   + G  IH  ++K+ 
Sbjct: 237 VISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLG 296

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC----------- 224
              +  +  S++  Y K G +  A+++F  + + ++  WNAMI G+A             
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAH 356

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
             G  AL +   +   G+  D +TF + L  CS +   + G QIHG II+S V   + + 
Sbjct: 357 KSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVG 416

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+ MY K   +D A K F  M  + +ISW ++  GF+ +    Q   LF    L G +
Sbjct: 417 TALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIK 476

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYMFCRCGAV 398
           PN VTF  +L  C        GL  + L        + N+       + LI M+ R G V
Sbjct: 477 PNQVTFVGVLSACS-----HAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 531

Query: 399 EMAHSVFDNVSYK-NITTWNELLSG 422
           E A  V   ++++ N T W+ L++G
Sbjct: 532 EEAFDVVHKMNFEPNETIWSMLIAG 556



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 134/271 (49%), Gaps = 2/271 (0%)

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G  +    +F +++ C           IHG I+KTGF    ++ + L+  Y   G ++++
Sbjct: 59  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 118

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +   R ++ +W  +++  V   H   A+ +F  ++EAG  P  Y LG +LN+C+++
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            + +  K +H ++IK   + +  + +++   Y+K   ++ A  AF +     DVI + ++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAF-KIIKEKDVISWTSV 237

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I +   +G  + ++  F  M    ++P++ T  SV+SAC     +D G  +  S+  + G
Sbjct: 238 ISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQI-HSLSIKLG 296

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              S      ++ +  + G+L +A+ + E M
Sbjct: 297 YGSSILIKNSIMYLYLKCGWLIEAQKLFEGM 327



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 2/185 (1%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+  NL +   G Q+HG I+K G   D+ +   L++MY+KCG    
Sbjct: 372 SGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDK 431

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R ++SWT +++   ++G     L+++ DM+  G  PN+     V+  C  
Sbjct: 432 ASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH 491

Query: 158 MG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
            G A E  Y       +  I+        +++ Y +LG V  A  V + ++   +   W+
Sbjct: 492 AGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWS 551

Query: 216 AMIGG 220
            +I G
Sbjct: 552 MLIAG 556


>gi|255568319|ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535593|gb|EEF37261.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 792

 Score =  284 bits (726), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 200/718 (27%), Positives = 352/718 (49%), Gaps = 48/718 (6%)

Query: 58  KSRVLGT--QVHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           ++R L T   +H   + LG   +   +L NN+I++Y+         +VFD M +R++ S+
Sbjct: 23  RARSLATTKPLHALTITLGPNPNQPAYLFNNIISLYTSFSELSLARKVFDNMPQRSIASY 82

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             I+++  + G  +  L ++  M+  GF PN F +  ++  C  M  S  G  +   A+K
Sbjct: 83  NSIITSYCKYGYLEEALGVFSRMRDCGFRPNNFTLSGLLS-CSKMDLS-IGLQLQALAMK 140

Query: 174 IRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
             +   + FVG ++LN + + G +  A  VF  +    +  WN++I  +   GY  + + 
Sbjct: 141 NGLFYIDAFVGTALLNVFGRWGWLNEALHVFEDLPIKSLVTWNSIICLFGQHGYVEDCII 200

Query: 233 VVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
               +  E G  + + +F+  L G       + G QIH L+ ++  + ++S+VN++I +Y
Sbjct: 201 YFCELHREIGCCLSECSFVGVLSGLVCGKYLEFGEQIHSLVTKTGFDYTVSVVNSVISVY 260

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
           +K + +  A K FE  A KD+++WNT+    ++++ P +   LF K      RPN +TF+
Sbjct: 261 VKCATLHLAEKKFEEAACKDIVTWNTMIVALAKSEKPIKALELFFKMPRDAIRPNQITFA 320

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            L+  C  L        +    +   F  +  V S+L+  + +C  ++ A   F  +  K
Sbjct: 321 SLISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDARCCFVKIHEK 380

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           N+ +WN L+ G C N C    +     + + G + N  +F  V+ +    E QQ+    H
Sbjct: 381 NVVSWNSLILG-CANKCPYAAISLLVEMLQCGYQPNEFSFSAVLISSSILELQQL----H 435

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF------------SNGA---------- 509
             II+ G+ +  Y+ SSLI SY   G + ++  F            SN            
Sbjct: 436 CLIIRMGYDNNDYVLSSLITSYGRNGLISDALVFLAASETPLAAVPSNNVAGIYNKAGHY 495

Query: 510 ----------ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
                     E  D  SW   ++A    G+  E   +F  ++ A   PD Y   ++L+S 
Sbjct: 496 YKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNYTYVSLLSSS 555

Query: 560 AAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           + I       SIH F+IK  F++ + +V + ++D Y KCG ++ +   F+ S    ++I 
Sbjct: 556 SQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFN-SMRDRNLIT 614

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +  LI A   +    EA+E F  M+   L+P +  F++V++AC H  LV +G  LFK M 
Sbjct: 615 WTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIELFKKMK 674

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           S YG++P  D Y CLVD+ SR+G++++A+ VI  MP  P+  ++R+ L GC+ + +KE
Sbjct: 675 S-YGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEGCKKYRSKE 731



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 173/417 (41%), Gaps = 39/417 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + I  A  +S   NL+  +    +H  ++   F  D+++ + L+  Y+KC       
Sbjct: 312 IRPNQITFASLISSCANLQIPMYAEFIHAKVIMHAFDTDVYVGSALVDYYAKCDKLDDAR 371

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F ++ E+N+VSW  ++        +   + + V+M   G+ PNEF+  +V+   +S  
Sbjct: 372 CCFVKIHEKNVVSWNSLILGCANKCPY-AAISLLVEMLQCGYQPNEFSFSAVL---ISSS 427

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV-------AAAERVFYSISSDDVG 212
             E    +HC  +++  + N +V  S++  Y + G +       AA+E    ++ S++V 
Sbjct: 428 ILELQ-QLHCLIIRMGYDNNDYVLSSLITSYGRNGLISDALVFLAASETPLAAVPSNNVA 486

Query: 213 -------------------------CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
                                     WN  I   A  G   E   +   ML   I  D Y
Sbjct: 487 GIYNKAGHYYKTLELLSQLEEPDNVSWNIAIAACARNGNYKEVFELFKQMLVAQIHPDNY 546

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDYAFKVFER 306
           T+++ L   S + D  +G  IHG +I++    C   + N L+DMY K   +  + K+F  
Sbjct: 547 TYVSLLSSSSQICDLALGSSIHGFLIKNNFSSCDTFVCNVLLDMYGKCGCLRSSVKIFNS 606

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M D+++I+W  L      N    +    F      G RP+ V F  +L  C     +  G
Sbjct: 607 MRDRNLITWTALISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEG 666

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSG 422
           ++L       G   E +    L+ +F R G V+ A  V  ++    N   W   L G
Sbjct: 667 IELFKKMKSYGLEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEG 723


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/590 (27%), Positives = 299/590 (50%), Gaps = 9/590 (1%)

Query: 179 NPFVGCSVLNFYAKLGD---VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +P     +L  Y+  G    +AAA RVF  I   D   WN+++  +   G   +A  ++ 
Sbjct: 25  SPTPWNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLK 84

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M   G+T   +   +AL+  +     ++G Q+    ++S +  ++   +AL+D+Y K  
Sbjct: 85  DMHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCG 144

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A +VF+ M  ++ +SWN L  G++E++ P Q   LF +       P+  TF+ LL 
Sbjct: 145 RLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLA 204

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
                    L  QL       G      V ++ I  + +CGA   +  +FD +  +++ +
Sbjct: 205 TVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLIS 264

Query: 416 WNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGA 473
           WN +L  Y ++  D + ++ F  +  ESGV+ +  +F  VV  C         G+ IH  
Sbjct: 265 WNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSL 324

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           ++K G     ++C+++I  Y  F +   ++++++  +     D  SW +M++   H G +
Sbjct: 325 VVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLS 384

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            +A+  F  +       DE+ L   L SC+ +   +  + +H  VI+ GF++  +V+S++
Sbjct: 385 SDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSL 444

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I  Y+KCG +  AR +F+++ +    + +N+++  YA HG      ++F +M    +   
Sbjct: 445 IFMYSKCGMVGDARKSFEEA-DKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLD 503

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TFV++++A SH GLVD+G  +  SM+++Y +    + Y C VD+  R G L+ AK +I
Sbjct: 504 HVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELI 563

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E MPFQP   V+ +LL  CRIHGN EL    +  L +  P+  + +VLLS
Sbjct: 564 ESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLS 613



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 148/618 (23%), Positives = 278/618 (44%), Gaps = 19/618 (3%)

Query: 83  NNLIAMYSKCGYFGWGL----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           N L+  YS  G  G GL    RVFDE+   + VSW  +++A +  G      ++  DM  
Sbjct: 30  NQLLTAYSASGP-GSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHA 88

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G   + FA+GS ++   +    E G  +  FA+K  +  N F   ++L+ YAK G ++ 
Sbjct: 89  RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RVF  +   +   WNA+I GYA      +A+ +   M    +  D  TF   L     
Sbjct: 149 ARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEG 208

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
            + + + +Q+HG I +      + ++NA I  Y +      + ++F+ +  +D+ISWN++
Sbjct: 209 PSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSM 268

Query: 319 FGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKL-LDLDLGLQLQCLALHC 376
            G ++ +    +    F + +  SG +P+  +F+ ++  C +   D   G  +  L +  
Sbjct: 269 LGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKI 328

Query: 377 GFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           G     +V +++I M+ R      +E A+  FD++ +K+  +WN +L+GY  +   +D L
Sbjct: 329 GLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDAL 388

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  +    V  +       + +C      ++  Q+H  +I++GFSS  ++ SSLI  Y
Sbjct: 389 RFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMY 448

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G + ++ +    A++     W +MM      G       +F  +++     D     
Sbjct: 449 SKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFV 508

Query: 554 TILNSCAAIGAYQRTKSI---HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            +L + +  G       I        K+    E Y     +D Y + G +  A+   +  
Sbjct: 509 ALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACG--VDLYGRAGQLDKAKELIESM 566

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDK 669
               D +V+ TL+ A   HG +  A ++   + +A  +P Q +T+V + S  S +G+   
Sbjct: 567 PFQPDAMVWMTLLGACRIHGNMELASDVASHLFVA--EPRQHSTYVLLSSMYSGRGMWSD 624

Query: 670 GCLLFKSMDSQYGMQPSP 687
              + K M ++ G+   P
Sbjct: 625 RATVQKVMKNR-GLSKVP 641



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 186/395 (47%), Gaps = 5/395 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+    VK G  +++F  + L+ +Y+KCG      RVFD M  RN VSW  +++   
Sbjct: 113 LGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYA 172

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++ +    ++++++M+    +P++    +++              +H    K        
Sbjct: 173 ESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLV 232

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE- 240
           V  + +  Y++ G  A + R+F  I S D+  WN+M+G YA+ G   EA+     M+ E 
Sbjct: 233 VLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRES 292

Query: 241 GITMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG--- 296
           G+  D Y+F + +  CS    D   GR IH L+++  +E    + NA+I MY + +    
Sbjct: 293 GVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCM 352

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M+ A+K F+ +  KD +SWN++  G+S +         F          +    S  LR 
Sbjct: 353 MEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRS 412

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L LG Q+  L +  GF   + V+SSLI+M+ +CG V  A   F+     +   W
Sbjct: 413 CSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPW 472

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           N ++ GY  +     V   F  + +  V ++  TF
Sbjct: 473 NSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTF 507



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 13/215 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+ +L    +L    LG QVH  +++ GF+++ F+ ++LI MYSKCG  G   + F
Sbjct: 402 DEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSF 461

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--- 159
           +E  + + V W  ++    Q+G+      ++ +M  +  +P +      +    S G   
Sbjct: 462 EEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHK-VPLDHVTFVALLTAYSHGGLV 520

Query: 160 --ASEFGYSIHC-FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
              SE   S+   + + +R+E      C V + Y + G +  A+ +  S+    D   W 
Sbjct: 521 DEGSEILNSMETRYKIPLRMEH---YACGV-DLYGRAGQLDKAKELIESMPFQPDAMVWM 576

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
            ++G     G   E  + V+S LF        T++
Sbjct: 577 TLLGACRIHG-NMELASDVASHLFVAEPRQHSTYV 610


>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
 gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
          Length = 871

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 186/694 (26%), Positives = 318/694 (45%), Gaps = 85/694 (12%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           I  +  LI M+S  G  G   +VF+ MA R+L++W+ ++ A    G +   + + V M  
Sbjct: 96  IVTETKLITMHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVVSLAVTMVR 155

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK----IRIEKNPFVGCSVLNFYAKLG 194
            G  P+ F +  +++ C      E G ++H  A++        ++  VG SVL  Y K  
Sbjct: 156 EGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCR 215

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           ++  A  VF  +   D+G WN+MI G        EA  ++  M  EG      T+     
Sbjct: 216 ELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTW----- 270

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD----K 310
                                         N LI  Y +S  +D A ++ E+M +     
Sbjct: 271 ------------------------------NTLISSYARSGELDVAMEMLEQMEESGVAP 300

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV++W +L  GF  +   G+    F +  L+G  PN +T +  +  C  L  L  G++L 
Sbjct: 301 DVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGMELH 360

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
           C A+  G ++     +SL+ M+ +CG +  A  +F+ +  K+I +WN +++GY       
Sbjct: 361 CHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIPEKDIFSWNSMVAGYAQAGYCG 420

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
              + FC +   GV  N  T+                                   + +I
Sbjct: 421 KAYELFCKMESLGVRRNVITW-----------------------------------NIMI 445

Query: 491 KSYVNFGQLDNSFEF-----SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
             Y+  G  + +FE      S G +R D ASW A+++  VH GH+  A+ IF  +     
Sbjct: 446 SGYIRNGDDERAFELFQMMESYGVKR-DTASWNALIAGSVHNGHSDRALRIFRQMQSLLV 504

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +PD   + +I+ + A + A+ + + IH  +       +  +A+A+I+AY+K GD+ GA  
Sbjct: 505 RPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKSGDLAGACA 564

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+  +S ++I +N +I+A+  HG   EA++ F +MK   ++P   T  +V+ A   +G
Sbjct: 565 VFDR-HSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQG 623

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
            V +   +F +M   Y + P  D Y  +VD+L R+G L++A   I+ MP  P+  V+ +L
Sbjct: 624 KVSEAKQIFYNMTHDYNIHPDLDHYAAIVDLLGRSGSLQEAYEFIDNMPLIPNLAVWEAL 683

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           L+   IHGN  L   A+ +L LL P +     L+
Sbjct: 684 LTAASIHGNARLANLAARELSLLDPSDPRIQRLV 717



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 119/552 (21%), Positives = 217/552 (39%), Gaps = 123/552 (22%)

Query: 62  LGTQVHGHIVKLGF----TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL------- 110
           LG  +H   ++ GF      D+ + N+++AMY KC   G    VF++M +R+L       
Sbjct: 180 LGVAMHSLAIRSGFMAETARDVPVGNSVLAMYVKCRELGRARVVFEKMGQRDLGTWNSMI 239

Query: 111 ----------------------------VSWTLIVSAAIQNGEFDMGLKM---------- 132
                                       V+W  ++S+  ++GE D+ ++M          
Sbjct: 240 FGCCQSNEWEEARMLLDDMRREGTLPGVVTWNTLISSYARSGELDVAMEMLEQMEESGVA 299

Query: 133 -------------------------YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
                                    ++ M+  G  PN   + S +  C S+     G  +
Sbjct: 300 PDVVTWTSLVSGFVHSDRSGEALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGMEL 359

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           HC A+K+    N   G S+++ YAK G++ AA+R+F  I   D+  WN+M+ GYA  GY 
Sbjct: 360 HCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIPEKDIFSWNSMVAGYAQAGYC 419

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +A  +   M   G+  +  T+                                   N +
Sbjct: 420 GKAYELFCKMESLGVRRNVITW-----------------------------------NIM 444

Query: 288 IDMYIKSSGMDYAFKVFERM----ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           I  YI++   + AF++F+ M      +D  SWN L  G   N +  +   +F +      
Sbjct: 445 ISGYIRNGDDERAFELFQMMESYGVKRDTASWNALIAGSVHNGHSDRALRIFRQMQSLLV 504

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RP+++T   ++     L+      ++     H     +  + ++LI  + + G +  A +
Sbjct: 505 RPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKSGDLAGACA 564

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR--- 460
           VFD  S +NI +WN ++  +  +    + L  FC + + GV  +  T   V++       
Sbjct: 565 VFDRHSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGK 624

Query: 461 -SENQQMV-GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL-DMASW 517
            SE +Q+     H   I         I   L +S    G L  ++EF +    + ++A W
Sbjct: 625 VSEAKQIFYNMTHDYNIHPDLDHYAAIVDLLGRS----GSLQEAYEFIDNMPLIPNLAVW 680

Query: 518 GAMMSALVHQGH 529
            A+++A    G+
Sbjct: 681 EALLTAASIHGN 692



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/382 (23%), Positives = 169/382 (44%), Gaps = 41/382 (10%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A ++S   +L+    G ++H H +K+G  N++   N+L+ MY+KCG      R+F+E+ 
Sbjct: 340 IASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAKRIFNEIP 399

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E+++ SW  +V+   Q G      +++  M++ G                          
Sbjct: 400 EKDIFSWNSMVAGYAQAGYCGKAYELFCKMESLG-------------------------- 433

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS----DDVGCWNAMIGGYA 222
                    + +N      +++ Y + GD   A  +F  + S     D   WNA+I G  
Sbjct: 434 ---------VRRNVITWNIMISGYIRNGDDERAFELFQMMESYGVKRDTASWNALIAGSV 484

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
           H G+   AL +   M    +  D  T ++ +   + +  F   R+IH  I  + +E    
Sbjct: 485 HNGHSDRALRIFRQMQSLLVRPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGK 544

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           I NALI+ Y KS  +  A  VF+R + +++ISWN +      + +P +    F +    G
Sbjct: 545 IANALINAYSKSGDLAGACAVFDRHSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEG 604

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMA 401
            RP+H T + +++  G    +    Q+     H   +  + +  ++++ +  R G+++ A
Sbjct: 605 VRPDHTTLTAVIKAYGLQGKVSEAKQIFYNMTHDYNIHPDLDHYAAIVDLLGRSGSLQEA 664

Query: 402 HSVFDNVSY-KNITTWNELLSG 422
           +   DN+    N+  W  LL+ 
Sbjct: 665 YEFIDNMPLIPNLAVWEALLTA 686



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 51/115 (44%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
            +R D I +   +    NL +     ++H  I       D  + N LI  YSK G     
Sbjct: 503 LVRPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKSGDLAGA 562

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
             VFD  + RN++SW  I+ A + +G     L  + +MK  G  P+   + +V+K
Sbjct: 563 CAVFDRHSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIK 617


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/560 (29%), Positives = 283/560 (50%), Gaps = 36/560 (6%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNAL 287
           EAL+++  M+  GI     T+ + LQGC         + +H  +I+++ EC  IS+ N L
Sbjct: 47  EALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKL 106

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           + +Y+K   +  A +VF+ M  K+V+SW  +   ++ +++  +    F++    G +PNH
Sbjct: 107 VSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNH 166

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            TF+ +L  C    DL++  +     +  GF     V + L+ M+ + G +E A  +FD 
Sbjct: 167 FTFASILPAC---TDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDK 223

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNI-------W-------------ESGVEVN 447
           +  +++ +WN +++GY  N    D LK F  I       W             E+ VE+ 
Sbjct: 224 MPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVEL- 282

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI-------CSSLIKSYVNFGQLD 500
              F  + E    S N  + G +    +K  F     +        +++I  +   GQ++
Sbjct: 283 ---FEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVE 339

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            + +        ++ SW AM++     G    A+ +F  +     KP+      +L +CA
Sbjct: 340 EALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACA 399

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           A+   ++    H  VI+ GF ++V V + ++  YAKCG I+ AR  FD+     D    +
Sbjct: 400 ALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDR-MRQQDSASLS 458

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            +I+ YA +G   E++E+F++M+   L+P + TFV V+SAC H GLVD+G   F  M   
Sbjct: 459 AMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRF 518

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y + P+ + YGC++D+L R G  ++A  +I  MP +P   ++ SLLS CR H N +LGE 
Sbjct: 519 YHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEK 578

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
            ++ L+ L P+N A +VLLS
Sbjct: 579 VAQHLIALNPQNPAPYVLLS 598



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 205/435 (47%), Gaps = 37/435 (8%)

Query: 56  NLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           N KS      +H H+++  F   DI L N L+++Y K G      RVFDEM  +N+VSWT
Sbjct: 76  NAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWT 135

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +++A  ++      L  + +M+  G  PN F   S++  C  +   E     H   +K 
Sbjct: 136 AMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDL---EVLGEFHDEIVKG 192

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E N FVG  +++ YAK G +  A  +F  +   DV  WNAMI GY   G   +AL   
Sbjct: 193 GFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALK-- 250

Query: 235 SSMLFEGIT-MDKYTFINALQGCSLVADFDIGRQ----------------IHGLIIRSEV 277
              LF+ I   D  T+   + G +   D +   +                I G +    V
Sbjct: 251 ---LFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSV 307

Query: 278 ECSISIV-----------NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           + +  +            NA+I  + ++  ++ A K+F+ M + +V+SWN +  G+S+N 
Sbjct: 308 KEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNG 367

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
                  LF +  +   +PN  TF+I+L  C  L  L+ G +   + +  GF  +  V +
Sbjct: 368 QAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGN 427

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+ M+ +CG++E A  VFD +  ++  + + ++ GY  N C  + L+ F  +  +G++ 
Sbjct: 428 TLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKP 487

Query: 447 NGCTFFYVVETCCRS 461
           +  TF  V+  CC +
Sbjct: 488 DRVTFVGVLSACCHA 502



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 141/618 (22%), Positives = 270/618 (43%), Gaps = 71/618 (11%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +V +  + G     L +  DM  NG  P+     S+++ C++  +      +H   ++ +
Sbjct: 35  LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94

Query: 176 IE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            E ++  +G  +++ Y KLG +  A RVF  +   +V  W AMI  YA   +G EAL   
Sbjct: 95  FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M   GI  + +TF + L  C+   D ++  + H  I++   E ++ + N L+DMY K 
Sbjct: 155 YEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKR 211

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +++A ++F++M  +DV+SWN +  G+ +N        LF +      + + +T++ ++
Sbjct: 212 GCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI----PKRDVITWNTMM 267

Query: 355 ---RQCGKL---LDLDLGLQLQCL----ALHCGF---------------LDEENVTS--S 387
               QCG +   ++L   +  Q L     +  G+               + E NV S  +
Sbjct: 268 AGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNA 327

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           +I  F + G VE A  +F  +   N+ +WN +++GY  N    + LK F  +    ++ N
Sbjct: 328 VISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPN 387

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  V+  C      +   + H  +I++GF S   + ++L+  Y   G ++++ +  +
Sbjct: 388 TETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFD 447

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
              + D AS  AM+      G + E++ +F  +   G KPD      +L++C   G    
Sbjct: 448 RMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDE 507

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            +     +      T  Y  +  ++ Y    D+ G    FD                   
Sbjct: 508 GRQYFDIM------TRFYHITPAMEHYGCMIDLLGRAGCFD------------------- 542

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
                 EA ++ +KM    ++P    + S++SAC     +D G  + + + +     P+P
Sbjct: 543 ------EANDLINKMP---IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAP 593

Query: 688 DCYGCLVDMLSRNGYLED 705
             Y  L ++ +  G  +D
Sbjct: 594 --YVLLSNIYAAAGRWDD 609



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 178/388 (45%), Gaps = 26/388 (6%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
            VLG + H  IVK GF +++F+ N L+ MY+K G   +   +FD+M +R++VSW  +++ 
Sbjct: 180 EVLG-EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAG 238

Query: 120 AIQNGEFDMGLKMYVDMKT------NGFMPNEFAVGSVMKV----------------CVS 157
            +QNG  +  LK++ ++        N  M      G V                    + 
Sbjct: 239 YVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMI 298

Query: 158 MGASEFGYSIHCFAL-KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            G  + G     F L +I  E+N     +V++ +A+ G V  A ++F ++   +V  WNA
Sbjct: 299 AGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNA 358

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GY+  G    AL +   M    +  +  TF   L  C+ +A  + G + H ++IRS 
Sbjct: 359 MIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSG 418

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            +  + + N L+ MY K   ++ A KVF+RM  +D  S + +  G++ N    ++  LF 
Sbjct: 419 FQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFE 478

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRC 395
           +   +G +P+ VTF  +L  C     +D G Q    +               +I +  R 
Sbjct: 479 QMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRA 538

Query: 396 GAVEMAHSVFDNVSYK-NITTWNELLSG 422
           G  + A+ + + +  K +   W  LLS 
Sbjct: 539 GCFDEANDLINKMPIKPDADMWGSLLSA 566



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 2/247 (0%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +I+ +++ G     L++F  M E N+VSW  +++   QNG+ +  LK++  M+     
Sbjct: 326 NAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMK 385

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           PN      V+  C ++   E G   H   ++   + +  VG +++  YAK G +  A +V
Sbjct: 386 PNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKV 445

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   D    +AMI GYA  G   E+L +   M F G+  D+ TF+  L  C      
Sbjct: 446 FDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLV 505

Query: 263 DIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFG 320
           D GRQ   ++ R   +  ++     +ID+  ++   D A  +  +M  K D   W +L  
Sbjct: 506 DEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLS 565

Query: 321 GFSENKN 327
               + N
Sbjct: 566 ACRTHNN 572



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 11/236 (4%)

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++ +L  QG   EA+ I   +VE G  P      ++L  C    +    K +H  +I+ 
Sbjct: 34  GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93

Query: 579 GFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            F   ++ + + ++  Y K G +  AR  FD+    N V+ +  +I AYA H    EA+ 
Sbjct: 94  QFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKN-VVSWTAMIAAYARHEHGQEALG 152

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
            F +M+   +QP+  TF S++ AC+   ++ +    F     + G + +      LVDM 
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMY 208

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           ++ G +E A+ + + MP Q     + ++++G   +G  E     + KL   +PK D
Sbjct: 209 AKRGCIEFARELFDKMP-QRDVVSWNAMIAGYVQNGLIE----DALKLFQEIPKRD 259


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 177/655 (27%), Positives = 317/655 (48%), Gaps = 42/655 (6%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+     +V+  C S G    G ++H      R E++  VG ++++ Y K   +  A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 203 FYSIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           F S+     +V  WNAMI  YA  G+  EAL +   M  +G+  D  TF++ L  CS +A
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               GR+IH  +  S ++   S+ NAL+ MY +   +  A ++F+ +  +D  SWN +  
Sbjct: 125 Q---GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
             S++ +      +F K +    +PN  T+  ++        L  G ++    +  GF  
Sbjct: 182 AHSQSGDWSGALRIF-KEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V ++LI M+ +CG+   A  VFD +  +++ +WN ++  Y  N    + L+ +  + 
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLD 300

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G +    TF  ++  C   +       +H  I++ G  S   + ++L+  Y   G L+
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 501 NSFEF--------------------SNGA-----------ERL---DMASWGAMMSALVH 526
            + +                     SNG            +RL   D  SW AM++  V 
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQ 420

Query: 527 QGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            G    A+ IF  +   AG KPD      +L +CA++G     K++H  + +    + V 
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVV 480

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V + +I+ YA+CG ++ A   F  +     V+ +  ++ A++ +G  +EA+++F +M L 
Sbjct: 481 VTNTLINMYARCGSLEEAERLFAAA-KEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLE 539

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            ++P   T+ S++  C+H G +++G   F  M   + + P+ D +  +VD+L R+G L D
Sbjct: 540 GVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFD 599

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           AK ++E MPF+P P  + + L+ CRIHG  ELGE A+E++  L P + A ++ +S
Sbjct: 600 AKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMS 654



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 164/669 (24%), Positives = 288/669 (43%), Gaps = 52/669 (7%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVS 118
           V G  +H  I    F  D  + N LI+MY KC        VF+ M   +RN+VSW  +++
Sbjct: 24  VEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIA 83

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A  QNG     L +Y  M   G   +     SV+  C S+     G  IH       ++ 
Sbjct: 84  AYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVFYSGLDS 140

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
              +  +++  YA+ G V  A+R+F S+ + D   WNA+I  ++  G    AL +   M 
Sbjct: 141 FQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMK 200

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            + +  +  T+IN + G S       GR+IH  I+ +  +  + +  ALI+MY K     
Sbjct: 201 CD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSH 259

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A +VF++M  +D++SWN + G +  N +  +   L+ K  + G +    TF  +L  C 
Sbjct: 260 EAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACS 319

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE------------------- 399
            +  L  G  +    L  G   E  V ++L+ M+ +CG++E                   
Sbjct: 320 SVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWST 379

Query: 400 ---------------MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESG 443
                           A  VFD +  ++  +WN +++ Y  N C    +K F  +   +G
Sbjct: 380 LIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAG 439

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           ++ +  TF  V+E C        V  +H  I ++   S   + ++LI  Y   G L+ + 
Sbjct: 440 LKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAE 499

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                A+   + SW AM++A    G   EA+ +F  +   G KPD+    +IL  C   G
Sbjct: 500 RLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGG 559

Query: 564 AYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           + ++       + +L          +A++D   + G +  A+   +      D + + T 
Sbjct: 560 SLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTF 619

Query: 623 IMAYAHHG---LVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMD 678
           + A   HG   L   A E     ++  L PS  A ++++ +  +  G+ +K   + K M+
Sbjct: 620 LTACRIHGKLELGEAAAE-----RVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKME 674

Query: 679 SQYGMQPSP 687
            + G++  P
Sbjct: 675 ER-GLKKLP 682



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 38/320 (11%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF- 95
           + F R    F++  L    ++K+   G  VH HI++ G  +++ +   L+ MY+KCG   
Sbjct: 302 EGFKRTKATFVS-ILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 96  ---------------------------GWG------LRVFDEMAERNLVSWTLIVSAAIQ 122
                                      G+G       +VFD +  R+ +SW  +++  +Q
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQ 420

Query: 123 NGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG     +K++ +M    G  P+     +V++ C S+G      ++H    +  +E N  
Sbjct: 421 NGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVV 480

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++N YA+ G +  AER+F +     V  W AM+  ++  G   EAL++   M  EG
Sbjct: 481 VTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEG 540

Query: 242 ITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           +  D  T+ + L  C+     + G R    +     +  +     A++D+  +S  +  A
Sbjct: 541 VKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDA 600

Query: 301 FKVFERMA-DKDVISWNTLF 319
            ++ E M  + D ++W T  
Sbjct: 601 KELLESMPFEPDPVAWMTFL 620



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 9/170 (5%)

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD     T+L SC++ G     +++H  +    F  +  V +A+I  Y KC  +  AR
Sbjct: 3   RQPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62

Query: 605 MAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
             F+   +   +V+ +N +I AYA +G  +EA+ ++ +M L  L     TFVSV+ ACS 
Sbjct: 63  SVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS 122

Query: 664 --KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             +G      + +  +DS   +         LV M +R G + DAK + +
Sbjct: 123 LAQGREIHNRVFYSGLDSFQSLA------NALVTMYARFGSVGDAKRMFQ 166


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 169/613 (27%), Positives = 313/613 (51%), Gaps = 4/613 (0%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-S 208
           S+++ C +  +      +H   L + +  +  +  S++N Y    D  +A  VF +I   
Sbjct: 8   SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQ 267
            DV  WN+++ GY+      + L V   +L   I + D +T+ N ++    +    +GR 
Sbjct: 68  SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IH ++++S   C + + ++L+ MY K +  + + +VF+ M ++DV SWNT+   F +  +
Sbjct: 128 IHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGD 187

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +   LF +   S   PN V+ ++ +  C +LL L+ G ++    L   F  +E V S+
Sbjct: 188 AEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSA 247

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ RC  +EMA  VF  +  K++  WN ++ GY         ++    +   G   +
Sbjct: 248 LVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPS 307

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C RS N      +HG +I++   +  YI  SLI  Y   G++  +     
Sbjct: 308 QTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFL 367

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
             ++  + SW  M+S  V  G+  +AV ++  +V  G +PD     ++L++C+ + A ++
Sbjct: 368 KTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEK 427

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            K IH  + +    T+  + SA++D Y+KCG++K A   F+ S    DV+ +  +I AY 
Sbjct: 428 GKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFN-SIPKKDVVSWTVMISAYG 486

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG   EA+  FD+M+   ++P   TF++V+SAC H GL+D+G   F  M S+YG++ S 
Sbjct: 487 SHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASI 546

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           + Y CL+D+L R G L +A  +++  P  + +  +  +L   C +H +  LG   ++ L+
Sbjct: 547 EQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLV 606

Query: 747 LLLPKNDAAHVLL 759
              P + + + +L
Sbjct: 607 EKYPDDASTYTVL 619



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 215/441 (48%), Gaps = 6/441 (1%)

Query: 18  FHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
           FH T K   RL        DSF   + I    +L          LG  +H  +VK G   
Sbjct: 86  FHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG------REFLGRMIHTVVVKSGHVC 139

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+ + ++L+ MY+K   F   ++VFDEM ER++ SW  ++S+  Q G+ +  L+++  M+
Sbjct: 140 DVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRME 199

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
            + F PN  ++   +  C  +   E G  IH   LK   E + +V  ++++ Y +   + 
Sbjct: 200 RSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLE 259

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  VF  +    +  WN+MI GY   G     + +++ M+ EG    + T  + L  CS
Sbjct: 260 MAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACS 319

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
              +   G+ +HG +IRS V+  I I  +LID+Y K   +  A  VF +     V SWN 
Sbjct: 320 RSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNV 379

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  G+    N  +   ++ + +  G +P+ VTF+ +L  C +L  L+ G Q+        
Sbjct: 380 MISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESR 439

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +E + S+L+ M+ +CG V+ A  +F+++  K++ +W  ++S Y  +    + L  F 
Sbjct: 440 LETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFD 499

Query: 438 NIWESGVEVNGCTFFYVVETC 458
            + + GV+ +G TF  V+  C
Sbjct: 500 EMQKFGVKPDGVTFLAVLSAC 520



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 154/306 (50%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   +K  F  D ++ + L+ MY +C +      VF +M  ++LV+W  ++   + 
Sbjct: 226 GKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVA 285

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+    +++   M   G  P++  + S++  C        G  +H + ++  ++ + ++
Sbjct: 286 RGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYI 345

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
            CS+++ Y K G+V  AE VF     D V  WN MI GY   G  F+A++V   M+  G+
Sbjct: 346 NCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGV 405

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  TF + L  CS +A  + G+QIH  I  S +E    +++AL+DMY K   +  A +
Sbjct: 406 QPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASR 465

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  +  KDV+SW  +   +  +  P +    F +    G +P+ VTF  +L  CG    
Sbjct: 466 IFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGL 525

Query: 363 LDLGLQ 368
           +D G++
Sbjct: 526 IDEGVK 531



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 61/125 (48%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +     LS    L +   G Q+H  I +     D  L + L+ MYSKCG      
Sbjct: 405 VQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEAS 464

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F+ + ++++VSWT+++SA   +G+    L  + +M+  G  P+     +V+  C   G
Sbjct: 465 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAG 524

Query: 160 ASEFG 164
             + G
Sbjct: 525 LIDEG 529


>gi|302804428|ref|XP_002983966.1| hypothetical protein SELMODRAFT_119183 [Selaginella moellendorffii]
 gi|300148318|gb|EFJ14978.1| hypothetical protein SELMODRAFT_119183 [Selaginella moellendorffii]
          Length = 876

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 194/722 (26%), Positives = 343/722 (47%), Gaps = 33/722 (4%)

Query: 66  VHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AIQN 123
           +HG + + G  T++I +   LI MY+ CG       VF  M  RN ++W+ +++A A   
Sbjct: 156 IHGLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVP 215

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G       ++  M+ +G +PNE    S++  C        G  IH    K     +  VG
Sbjct: 216 GHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGRLIHEATDKYGYGSDVVVG 275

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVG--CWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            SVLN Y K GDV  A ++F  +         WN+++G Y       +A+ + S M  EG
Sbjct: 276 NSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQTRNFVQAVELFSLMQLEG 335

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI----SIVNALIDMYIKSSGM 297
           ++ +K TF+ AL  C+ +A+   G+ +    +   VEC +     +  AL+ ++ K   +
Sbjct: 336 VSANKVTFLAALNACAGLAEMTAGKTV----VDCVVECGLFGDDLVKTALVSLFGKCGYL 391

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQ 356
           D A  V   +   D +SWN++   ++  +   Q     FH     G  P    F   L  
Sbjct: 392 DVAESVLGEILVPDSVSWNSIVAAYASQQGHDQDVLREFHLMHSHGLIPEDGVFVAALNA 451

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV--SYKNIT 414
           C  L  L  G  +  L    G ++  +V ++L+ M+ +CG + +A  +F +V   +++  
Sbjct: 452 CSNLGALKQGKLVHYLVRETG-VESTDVFTALVNMYGKCGELLIAREIFSSVPDEFRDAL 510

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L++ +       + L  +  + + G       F  V+       +     +IH  +
Sbjct: 511 TWNALINAHTQQGKPEEALSFYRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQV 570

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV--------- 525
            +        + + L+  Y   G +D ++E     +  D  +W +M+ A +         
Sbjct: 571 AECLLDLDSTVGTLLVNMYAKSGDVDTAWEIFERMQHSDTVTWNSMLGACIQQRQRPSEA 630

Query: 526 -HQGHNHEAVTI--FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV--IKLGF 580
            H+   +EAV +  F  ++  G + D   L T+L++CA+  +    K +H  V  + L  
Sbjct: 631 PHEQQENEAVVVRLFARMLLEGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSL 690

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQ--SFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
            ++  + +A++  Y++CG  + ++  F    S++  D+I +N++I A A HG   +A+E+
Sbjct: 691 ESDTGLFNALVTMYSRCGSWEVSQAMFHAMGSYH-GDLITWNSMITACAQHGQALQAVEL 749

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
              M+ A   P + T   ++SACSH GL+DK    F+ M  +Y + P PD YG +VD+L 
Sbjct: 750 VRGMEQAGWSPDKVTLTVILSACSHAGLLDKAYECFQLMRGEYEIDPGPDHYGSIVDLLC 809

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L +A+ +IE +P   S   +RSLL GC  HG+  LG  A+++L  + P++   +V+
Sbjct: 810 RAGKLGEAEALIEKLPDPASAVTWRSLLGGCSNHGDLVLGRRAADELFGMDPRHHTTYVM 869

Query: 759 LS 760
           LS
Sbjct: 870 LS 871



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 185/730 (25%), Positives = 342/730 (46%), Gaps = 36/730 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   I + GF  +  L N+LI +Y + G        FD + E+N+VS+  +++A  QNG
Sbjct: 54  QLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQNG 113

Query: 125 EFDMG-LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE-KNPFV 182
               G       +  +  M N  +  SV+K C      E  + IH    +  +   N  V
Sbjct: 114 HSRQGLGLFRKLLLLDSKMANIVSFISVIKSCCDERLEECRW-IHGLVDEAGLSTSNIVV 172

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-GYGFEALNVVSSMLFEG 241
           G +++N YA  G VA AE VF S+ S +   W+A+I  +A   G+  +  ++  +M   G
Sbjct: 173 GTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVPGHACQIWDIFRAMENSG 232

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ TFI+ L  C++  D  +GR IH    +      + + N++++MY K   +D A 
Sbjct: 233 VVPNEVTFISMLSSCTVAEDLSVGRLIHEATDKYGYGSDVVVGNSVLNMYGKCGDVDRAR 292

Query: 302 KVFERMADKDV--ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           ++F+ M DK    ++WN+L G +++ +N  Q   LF    L G   N VTF   L  C  
Sbjct: 293 QLFDEMGDKHAAPVAWNSLMGAYTQTRNFVQAVELFSLMQLEGVSANKVTFLAALNACAG 352

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L ++  G  +    + CG   ++ V ++L+ +F +CG +++A SV   +   +  +WN +
Sbjct: 353 LAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEILVPDSVSWNSI 412

Query: 420 LSGYCFNCC-DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ Y      D DVL+ F  +   G+      F   +  C      +    +H  + +TG
Sbjct: 413 VAAYASQQGHDQDVLREFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRETG 472

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERL-DMASWGAMMSALVHQGHNHEAVTI 536
             S   + ++L+  Y   G+L  + E FS+  +   D  +W A+++A   QG   EA++ 
Sbjct: 473 VESTD-VFTALVNMYGKCGELLIAREIFSSVPDEFRDALTWNALINAHTQQGKPEEALSF 531

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           +  + + G +P + +  ++LN+ AA+G+    + IH  V +   + +  V + +++ YAK
Sbjct: 532 YRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECLLDLDSTVGTLLVNMYAK 591

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMA----------YAHHGLVSEA--MEIFDKMKL 644
            GD+  A   F++    +D + +N+++ A            H    +EA  + +F +M L
Sbjct: 592 SGDVDTAWEIFER-MQHSDTVTWNSMLGACIQQRQRPSEAPHEQQENEAVVVRLFARMLL 650

Query: 645 ANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
             ++  + T ++++SAC SH  L     L     +    ++     +  LV M SR G  
Sbjct: 651 EGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCGSW 710

Query: 704 EDAKHVIEIM-PFQPSPTVYRSLLSGCRIHGNK----------ELGEWASEKLLLLLPKN 752
           E ++ +   M  +      + S+++ C  HG            E   W+ +K+ L +  +
Sbjct: 711 EVSQAMFHAMGSYHGDLITWNSMITACAQHGQALQAVELVRGMEQAGWSPDKVTLTVILS 770

Query: 753 DAAHV-LLSK 761
             +H  LL K
Sbjct: 771 ACSHAGLLDK 780



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 271/604 (44%), Gaps = 37/604 (6%)

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
           +    +++ C   G+      +     +     N  +G  ++N Y +LG V  A   F  
Sbjct: 34  YGFAGLIQACSRSGSPRAAKQLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDG 93

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDI 264
           I   +V  +NAMI  YA  G+  + L +   +L     M +  +FI+ ++ C      + 
Sbjct: 94  IEEKNVVSFNAMITAYAQNGHSRQGLGLFRKLLLLDSKMANIVSFISVIKSCC-DERLEE 152

Query: 265 GRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            R IHGL+  + +  S I +  ALI+MY     +  A  VF  M  ++ I+W+ L    +
Sbjct: 153 CRWIHGLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHA 212

Query: 324 ENKNPG---QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
               PG   Q   +F     SG  PN VTF  +L  C    DL +G  +       G+  
Sbjct: 213 --AVPGHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGRLIHEATDKYGYGS 270

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT--TWNELLSGYCFNCCDADVLKTFCN 438
           +  V +S++ M+ +CG V+ A  +FD +  K+     WN L+  Y         ++ F  
Sbjct: 271 DVVVGNSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQTRNFVQAVELFSL 330

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV  N  TF   +  C           +   +++ G      + ++L+  +   G 
Sbjct: 331 MQLEGVSANKVTFLAALNACAGLAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGY 390

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALV-HQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           LD +          D  SW ++++A    QGH+ + +  FH +   G  P++ +    LN
Sbjct: 391 LDVAESVLGEILVPDSVSWNSIVAAYASQQGHDQDVLREFHLMHSHGLIPEDGVFVAALN 450

Query: 558 SCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS-ND 615
           +C+ +GA ++ K +H  V + G  +T+V+  +A+++ Y KCG++  AR  F    +   D
Sbjct: 451 ACSNLGALKQGKLVHYLVRETGVESTDVF--TALVNMYGKCGELLIAREIFSSVPDEFRD 508

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----- 670
            + +N LI A+   G   EA+  + +M+    +P ++ FVSV++A +  G   +G     
Sbjct: 509 ALTWNALINAHTQQGKPEEALSFYRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHE 568

Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV-YRSL 725
               CLL   +DS  G          LV+M +++G ++ A  + E M  Q S TV + S+
Sbjct: 569 QVAECLL--DLDSTVGT--------LLVNMYAKSGDVDTAWEIFERM--QHSDTVTWNSM 616

Query: 726 LSGC 729
           L  C
Sbjct: 617 LGAC 620



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 142/664 (21%), Positives = 285/664 (42%), Gaps = 66/664 (9%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I +  S +++E+L    +G  +H    K G+ +D+ + N+++ MY KCG      ++FDE
Sbjct: 241 ISMLSSCTVAEDLS---VGRLIHEATDKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDE 297

Query: 105 MAERNL--VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           M +++   V+W  ++ A  Q   F   ++++  M+  G   N+    + +  C  +    
Sbjct: 298 MGDKHAAPVAWNSLMGAYTQTRNFVQAVELFSLMQLEGVSANKVTFLAALNACAGLAEMT 357

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G ++    ++  +  +  V  ++++ + K G +  AE V   I   D   WN+++  YA
Sbjct: 358 AGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEILVPDSVSWNSIVAAYA 417

Query: 223 -HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G+  + L     M   G+  +   F+ AL  CS +     G+ +H L+  + VE S 
Sbjct: 418 SQQGHDQDVLREFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRETGVE-ST 476

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +  AL++MY K   +  A ++F  + D  +D ++WN L    ++   P +  S + +  
Sbjct: 477 DVFTALVNMYGKCGELLIAREIFSSVPDEFRDALTWNALINAHTQQGKPEEALSFYRRMQ 536

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G+RP    F  +L     L     G ++      C    +  V + L+ M+ + G V+
Sbjct: 537 QEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECLLDLDSTVGTLLVNMYAKSGDVD 596

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNC-------------CDADVLKTFCNIWESGVEV 446
            A  +F+ + + +  TWN +L G C                 +A V++ F  +   G+ V
Sbjct: 597 TAWEIFERMQHSDTVTWNSML-GACIQQRQRPSEAPHEQQENEAVVVRLFARMLLEGIRV 655

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS--SCGYICSSLIKSYVNFG--QLDNS 502
           +  T   ++  C    +     ++HG + +   S  S   + ++L+  Y   G  ++  +
Sbjct: 656 DRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCGSWEVSQA 715

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
              + G+   D+ +W +M++A    G   +AV +   + +AG  PD+  L  IL++C+  
Sbjct: 716 MFHAMGSYHGDLITWNSMITACAQHGQALQAVELVRGMEQAGWSPDKVTLTVILSACSHA 775

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           G                          ++D   +C  +       D   +      Y ++
Sbjct: 776 G--------------------------LLDKAYECFQLMRGEYEIDPGPDH-----YGSI 804

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +      G + EA  + +K+      P+ A T+ S++  CS+ G +  G    ++ D  +
Sbjct: 805 VDLLCRAGKLGEAEALIEKLP----DPASAVTWRSLLGGCSNHGDLVLG---RRAADELF 857

Query: 682 GMQP 685
           GM P
Sbjct: 858 GMDP 861



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 231/489 (47%), Gaps = 34/489 (6%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D Y F   +Q CS        +Q+   I R     + S+ N LI++Y +   +  A   
Sbjct: 31  IDVYGFAGLIQACSRSGSPRAAKQLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAA 90

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLD 362
           F+ + +K+V+S+N +   +++N +  Q   LF K +L  S+  N V+F  +++ C     
Sbjct: 91  FDGIEEKNVVSFNAMITAYAQNGHSRQGLGLFRKLLLLDSKMANIVSFISVIKSC----- 145

Query: 363 LDLGLQLQCLALHCGFLDEENVTSS-------LIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            D  L+ +C  +H G +DE  +++S       LI M+  CG+V  A +VF ++  +N  T
Sbjct: 146 CDERLE-ECRWIH-GLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEIT 203

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWE-------SGVEVNGCTFFYVVETCCRSENQQMVG 468
           W+ L++ +      A V    C IW+       SGV  N  TF  ++ +C  +E+  +  
Sbjct: 204 WSALIAAH------AAVPGHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGR 257

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVH 526
            IH A  K G+ S   + +S++  Y   G +D + +  +  G +     +W ++M A   
Sbjct: 258 LIHEATDKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQ 317

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
             +  +AV +F  +   G   ++      LN+CA +      K++   V++ G   +  V
Sbjct: 318 TRNFVQAVELFSLMQLEGVSANKVTFLAALNACAGLAEMTAGKTVVDCVVECGLFGDDLV 377

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA-HHGLVSEAMEIFDKMKLA 645
            +A++  + KCG +  A     +     D + +N+++ AYA   G   + +  F  M   
Sbjct: 378 KTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWNSIVAAYASQQGHDQDVLREFHLMHSH 436

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            L P    FV+ ++ACS+ G + +G L+   +  + G++ S D +  LV+M  + G L  
Sbjct: 437 GLIPEDGVFVAALNACSNLGALKQGKLVHY-LVRETGVE-STDVFTALVNMYGKCGELLI 494

Query: 706 AKHVIEIMP 714
           A+ +   +P
Sbjct: 495 AREIFSSVP 503


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 301/593 (50%), Gaps = 12/593 (2%)

Query: 173 KIRIEKNPFVGCSVLNFYA--KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           ++R ++ P +   VL+  A  ++ D  AA R     SS D    N +I G+A  G    A
Sbjct: 37  RVRPKRGPSLKSLVLSHAAAGRMHDALAAVR-----SSPDAFLHNVVIRGFADAGLPEAA 91

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALID 289
           L    +ML  G   D++TF   ++ C+ +   + GR  H   IR   V   +   N+L+ 
Sbjct: 92  LAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLA 151

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
            Y K   +  A +VF+ M  +D+++WN++  G+  N         F + +  G +  H  
Sbjct: 152 FYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFRE-MHEGLQVQHDG 210

Query: 350 FSILLRQCGKLLDLDL--GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
             I+       LD  L  G ++    +  G   +  V +SL+ M+C+CGA+  A  +F  
Sbjct: 211 VGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFAT 270

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  + + TWN ++ GY  N C  +    F  +   G +V   T   ++  C ++E+    
Sbjct: 271 MPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYG 330

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             +HG + ++ F     + ++L++ Y   G++ +S           + SW  M++A +++
Sbjct: 331 RSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYK 390

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
              +EA+T+F  L+     PD + +  ++ +   +G  ++ + +H ++++L +     V 
Sbjct: 391 EMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVT 450

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +AV+  YA+CGD+  +R  FD+     DVI +NT+IM YA HG    A+E+F +MK   L
Sbjct: 451 NAVMHMYARCGDVVSSRKIFDK-MAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGL 509

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           QP+++TFVSV++ACS  G+ D+G + F  M   YG+ P  + YGC+ D+L R G L +  
Sbjct: 510 QPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVL 569

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             IE +P  P+  ++ SLL+  R   + ++ E+A+E++  L   N   +V+LS
Sbjct: 570 KFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILS 622



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 202/407 (49%), Gaps = 14/407 (3%)

Query: 63  GTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G   H   ++LG   ++++  N+L+A Y+K G      RVFD M  R++V+W  +V   +
Sbjct: 126 GRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYV 185

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVG--SVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            NG   + L  + +M   G       VG  + +  C    A   G  +H + ++  +E++
Sbjct: 186 SNGLGALALDCFREMH-EGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQD 244

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG S+L+ Y K G +A+AE +F ++ S  V  WN MIGGYA  G   EA +    M  
Sbjct: 245 VKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKA 304

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG  ++  T IN L  C+       GR +HG + RS+    + +  AL++MY K   +  
Sbjct: 305 EGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKS 364

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           +  +F +M +K ++SWN +   +   +   +  +LF + +     P++ T S ++     
Sbjct: 365 SETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAF-- 422

Query: 360 LLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              + LGL  QC  +H       + +   VT+++++M+ RCG V  +  +FD ++ K++ 
Sbjct: 423 ---VLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVI 479

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +WN ++ GY  +      L+ F  +  +G++ N  TF  V+  C  S
Sbjct: 480 SWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVS 526



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 202/443 (45%), Gaps = 4/443 (0%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFV 182
           G  +  L  Y  M   G  P+ F    V+K C  +GA E G + H  A+++  +    + 
Sbjct: 86  GLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYT 145

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+L FYAKLG VA AERVF  +   D+  WN+M+ GY   G G  AL+    M  EG+
Sbjct: 146 GNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM-HEGL 204

Query: 243 TM--DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  D    I AL  C L +    GR++H  +IR  +E  + +  +L+DMY K   +  A
Sbjct: 205 QVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASA 264

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  M  + V++WN + GG++ N  P +    F +    G +   VT   LL  C + 
Sbjct: 265 EGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQT 324

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
                G  +        FL    + ++L+ M+ + G V+ + ++F  ++ K + +WN ++
Sbjct: 325 ESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMI 384

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y +     + +  F  +    +  +  T   VV         +   Q+H  I++  + 
Sbjct: 385 AAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYG 444

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++++  Y   G + +S +  +     D+ SW  ++      G    A+ +F  +
Sbjct: 445 ENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEM 504

Query: 541 VEAGEKPDEYILGTILNSCAAIG 563
              G +P+E    ++L +C+  G
Sbjct: 505 KSNGLQPNESTFVSVLTACSVSG 527



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 123/233 (52%), Gaps = 7/233 (3%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+     +S + G  VHG++ +  F   + L+  L+ MYSK G       +F +M  + L
Sbjct: 318 LAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTL 377

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  +++A +    ++  + +++++      P+ F + +V+   V +G       +H +
Sbjct: 378 VSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSY 437

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +++   +N  V  +V++ YA+ GDV ++ ++F  ++  DV  WN +I GYA  G G  A
Sbjct: 438 IVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIA 497

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSL--VAD-----FDIGRQIHGLIIRSE 276
           L + S M   G+  ++ TF++ L  CS+  +AD     F++ ++ +G+I + E
Sbjct: 498 LEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIE 550


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 180/708 (25%), Positives = 353/708 (49%), Gaps = 18/708 (2%)

Query: 63  GTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-----RNLVSWTLI 116
           G  +H  I+  GF  +D ++  +LI  Y KCG FG  ++VFD++ E     +++  W  I
Sbjct: 68  GKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSI 127

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYS--IHCFAL 172
           V+   + G    G+  +  M+  G  P+ +++      C+ +GAS+   GY+  IH +++
Sbjct: 128 VNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSL------CILLGASDGHLGYAKQIHGYSV 181

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEAL 231
           +     +PF+   ++  Y   G    A R+F  +    +V  WN MIGG+   G    +L
Sbjct: 182 RKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSL 241

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            V      E + +   +F + L  C        G Q+H  +++   E    +  +L+ MY
Sbjct: 242 EVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMY 301

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ A  VF++++ K    WN +   +  N        ++ +  +    P+ +T +
Sbjct: 302 SKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTAT 361

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L  C  +   D G  +    +         + S+L+ M+ +CG  + A+S+F+ +  +
Sbjct: 362 NVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGR 421

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++  W  ++SG+C N    + L+ + ++   G + +      VV  C   +N  +   IH
Sbjct: 422 DVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIH 481

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G  IK+G     ++ SSL+  Y  F     S    +     ++ +W +++S     G   
Sbjct: 482 GLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPD 541

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            ++++F  + + G  PD   + ++L S +++   ++ K++H ++I+    +++ + +A+I
Sbjct: 542 LSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALI 601

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG +K A+  F     +N ++ +N +I     HG   +AM +FD+M+   + P  
Sbjct: 602 DMYIKCGFLKYAQHIFQNMLQTN-LVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDD 660

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF+S++++C+H G +++G  LF+ M  ++G++P  + Y  +VD+L R G L+DA   ++
Sbjct: 661 ITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVK 720

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            +P +P  +++ SLL  CR+H N ELG+ A+ KLL + P   + +V L
Sbjct: 721 NLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQL 768



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 161/669 (24%), Positives = 304/669 (45%), Gaps = 10/669 (1%)

Query: 26  HRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           H+  G  QFC        P   +  + L  +        Q+HG+ V+  F  D FL++ L
Sbjct: 136 HKKEGIAQFCRMQLFGVRPDAYSLCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGL 195

Query: 86  IAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           I MY  CG      R+F E+ ++ N+V+W +++    +NG ++  L++Y+  K       
Sbjct: 196 IYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLV 255

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
             +  S +  C       FG  +HC  +K+  E +P+V  S+L  Y+K   V  AE VF 
Sbjct: 256 SASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFD 315

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +S      WNAMI  Y   G  ++ L +   M    I  D  T  N L  C LV  +D 
Sbjct: 316 QVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDF 375

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           GR IH  +++  ++ ++++ +AL+ MY K    D A  +F  +  +DV++W ++  GF +
Sbjct: 376 GRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQ 435

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N+   +    ++   + G +P+    + ++  C  L +++LG  +  LA+  G   +  V
Sbjct: 436 NRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFV 495

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            SSL+ M+ +    +M+ +VF ++  KN+  WN ++S YC N      +  F  + + G+
Sbjct: 496 ASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGL 555

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  +   V+ +       +    +HG +I+    S   + ++LI  Y+  G L  +  
Sbjct: 556 FPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQH 615

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                 + ++ +W  M++     G   +A+++F  +   G  PD+    ++L SC   G 
Sbjct: 616 IFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGF 675

Query: 565 YQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF--NSNDVIVYNT 621
            +   K      ++ G    +     ++D   + G +  A  AF ++     +  I  + 
Sbjct: 676 IEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDA-YAFVKNLPIEPDRSIWLSL 734

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           L     HH +    +      KL +++PS+ + +V +++      L D+   L  SM  +
Sbjct: 735 LCSCRVHHNV---ELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEK 791

Query: 681 YGMQPSPDC 689
            G++ +P C
Sbjct: 792 -GLKKTPGC 799



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/654 (25%), Positives = 304/654 (46%), Gaps = 41/654 (6%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R    +A  +L+   ++    +Q G++   L+ Y     N      F   S++K C  + 
Sbjct: 9   RKLSNLAHSDLIDPKIV--TLVQQGQYVDALQFY---SRNPLNATRFTYPSLLKACGFLS 63

Query: 160 ASEFGYSIHCFAL-KIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----YSISSDDVGC 213
             ++G +IH   + K     +P++  S++NFY K G    A +VF       +S  DV  
Sbjct: 64  NLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTF 123

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD----IGRQIH 269
           WN+++ GY   G+  E +     M   G+  D Y+       C L+   D      +QIH
Sbjct: 124 WNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSL------CILLGASDGHLGYAKQIH 177

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNP 328
           G  +R        + + LI MY        A+++F+ + DK +V++WN + GGF EN   
Sbjct: 178 GYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGEN--- 234

Query: 329 GQTASLFHKFILSGS---RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
           G   +    ++L+ +   +    +F+  L  C +   +  G+Q+ C  +  GF ++  V 
Sbjct: 235 GLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVC 294

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           +SL+ M+ +C  VE A +VFD VS K    WN ++S Y  N    D LK +  +    + 
Sbjct: 295 TSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIP 354

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +  T   V+ +CC   +      IH  ++K    S   + S+L+  Y   G  D++   
Sbjct: 355 PDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSI 414

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            N  +  D+ +WG+M+S         EA+  ++S+   GEKPD  I+ +++++C  +   
Sbjct: 415 FNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNV 474

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
               +IH   IK G   +V+VAS+++D Y+K    K +   F      N ++ +N++I  
Sbjct: 475 NLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKN-LVAWNSIISC 533

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----HKGLVDKGCLLFKSMDSQ 680
           Y  +GL   ++ +F +M    L P   +  SV+ + S      KG    G L+ + + S 
Sbjct: 534 YCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSD 593

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             ++        L+DM  + G+L+ A+H+ + M  Q +   +  +++GC  HG+
Sbjct: 594 LQLE------NALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGCGSHGD 640


>gi|302809936|ref|XP_002986660.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
 gi|300145548|gb|EFJ12223.1| hypothetical protein SELMODRAFT_124564 [Selaginella moellendorffii]
          Length = 691

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 171/638 (26%), Positives = 310/638 (48%), Gaps = 42/638 (6%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G SIH   ++  ++++ F+   V++ Y +LG +  A ++      DD G W  MI  +A 
Sbjct: 48  GRSIHADLVRDGLDRDEFLASYVIHMYLRLGSLYDARQLLRQFDLDDTGLWTTMISAFAQ 107

Query: 224 CGYGFEALNVVSSMLFEG---ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVEC 279
            G   EAL++  +M   G      DK +F+ A+  CS   D + G+ IH      +E+E 
Sbjct: 108 RGQHREALDLFHAMQQCGDGSSRPDKTSFVVAISACSETRDLEQGKSIHASFAGVNEIET 167

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +++ + L++MY K   +  A ++F RM +K +++WN +   +  +  P ++  L  +  
Sbjct: 168 DVAVASTLVNMYNKCGDLPQACRIFARMPEKSLVTWNIMIAAYIHHGFPTKSLQLLDQMQ 227

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS-LIYMFCRCGAV 398
           L G RP  VTF   L  C  L  L  G  +   A     +D + V S+ LI M+ +CG+V
Sbjct: 228 LEGIRPQKVTFINSLNGCSILGKLRPGKTIHSCAAEQRLIDRDVVLSTALITMYSKCGSV 287

Query: 399 EMAHSVFDNVS--YKNITTWNELLSGYCFNCCDADVLKTFCN-------------IW--- 440
           + A  +FD+++   KN  +WN +L+GY  N   +D ++ F +             +W   
Sbjct: 288 DEARKIFDSMAGDVKNTISWNAMLAGYAQNSRSSDAIQLFRSMDLEAQCKEEDVVLWTTM 347

Query: 441 ------------------ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
                             E  ++ +   F   ++ C  + + +   +I   I   G  S 
Sbjct: 348 LGGYSDRGDHAAALELFREMRIKPDAIAFVAAIDACANAGSIRDGEEILARIRGCGCESD 407

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L   +  FG LD + +  +  E     SW AM+ A+  QG   EA+ +F  ++ 
Sbjct: 408 DRVGTALCYMFAQFGLLDRASQIFDRLESKSAISWNAMLGAMAAQGLAIEAMELFRRMLG 467

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G +PDE     +L+      +    + +H  + + G +  V++ +A+++ Y KCG +  
Sbjct: 468 EGSRPDEITFAAMLDCFVGQSSLGEGRFVHGLIAESGRDRGVFLGTALLNMYGKCGSLAD 527

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           + +A   + +  + I +N LI A+A +G   E++++F +++      +  TF SV++AC 
Sbjct: 528 S-IAIFANLSHRNTISWNALIAAHASNGRFLESLDLFQELQNEGFLANTITFQSVIAACG 586

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL D+GC     M   +G+ P P+ YGC++D+L R G+L +A+ ++   P +      
Sbjct: 587 HAGLADRGCDYMVLMIEDHGIVPLPEHYGCMIDLLGRAGWLGEAEDLVLRTPQEERAFNG 646

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +LLS CR HG+ E G   ++ L+ + P    A+ LLS
Sbjct: 647 MALLSSCRTHGDFERGRRVAQMLMKIAPGRTGAYALLS 684



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/555 (24%), Positives = 240/555 (43%), Gaps = 45/555 (8%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N +  V G  +H  +V+ G   D FL + +I MY + G      ++  +    +   WT 
Sbjct: 41  NCRRLVEGRSIHADLVRDGLDRDEFLASYVIHMYLRLGSLYDARQLLRQFDLDDTGLWTT 100

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNG---FMPNEFAVGSVMKVCVSMGASEFGYSIHC-FA 171
           ++SA  Q G+    L ++  M+  G     P++ +    +  C      E G SIH  FA
Sbjct: 101 MISAFAQRGQHREALDLFHAMQQCGDGSSRPDKTSFVVAISACSETRDLEQGKSIHASFA 160

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
               IE +  V  +++N Y K GD+  A R+F  +    +  WN MI  Y H G+  ++L
Sbjct: 161 GVNEIETDVAVASTLVNMYNKCGDLPQACRIFARMPEKSLVTWNIMIAAYIHHGFPTKSL 220

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDM 290
            ++  M  EGI   K TFIN+L GCS++     G+ IH        ++  + +  ALI M
Sbjct: 221 QLLDQMQLEGIRPQKVTFINSLNGCSILGKLRPGKTIHSCAAEQRLIDRDVVLSTALITM 280

Query: 291 YIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFILSGS----- 343
           Y K   +D A K+F+ MA   K+ ISWN +  G+++N        LF    L        
Sbjct: 281 YSKCGSVDEARKIFDSMAGDVKNTISWNAMLAGYAQNSRSSDAIQLFRSMDLEAQCKEED 340

Query: 344 -----------------------------RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
                                        +P+ + F   +  C     +  G ++     
Sbjct: 341 VVLWTTMLGGYSDRGDHAAALELFREMRIKPDAIAFVAAIDACANAGSIRDGEEILARIR 400

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
            CG   ++ V ++L YMF + G ++ A  +FD +  K+  +WN +L          + ++
Sbjct: 401 GCGCESDDRVGTALCYMFAQFGLLDRASQIFDRLESKSAISWNAMLGAMAAQGLAIEAME 460

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
            F  +   G   +  TF  +++ C   ++    G+ +HG I ++G     ++ ++L+  Y
Sbjct: 461 LFRRMLGEGSRPDEITFAAMLD-CFVGQSSLGEGRFVHGLIAESGRDRGVFLGTALLNMY 519

Query: 494 VNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
              G L +S   F+N + R +  SW A+++A    G   E++ +F  L   G   +    
Sbjct: 520 GKCGSLADSIAIFANLSHR-NTISWNALIAAHASNGRFLESLDLFQELQNEGFLANTITF 578

Query: 553 GTILNSCAAIGAYQR 567
            +++ +C   G   R
Sbjct: 579 QSVIAACGHAGLADR 593



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 199/464 (42%), Gaps = 38/464 (8%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSK 91
           Q C D   R D      ++S     +    G  +H     +     D+ + + L+ MY+K
Sbjct: 122 QQCGDGSSRPDKTSFVVAISACSETRDLEQGKSIHASFAGVNEIETDVAVASTLVNMYNK 181

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      R+F  M E++LV+W ++++A I +G     L++   M+  G  P +    + 
Sbjct: 182 CGDLPQACRIFARMPEKSLVTWNIMIAAYIHHGFPTKSLQLLDQMQLEGIRPQKVTFINS 241

Query: 152 MKVCVSMGASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD- 209
           +  C  +G    G +IH C A +  I+++  +  +++  Y+K G V  A ++F S++ D 
Sbjct: 242 LNGCSILGKLRPGKTIHSCAAEQRLIDRDVVLSTALITMYSKCGSVDEARKIFDSMAGDV 301

Query: 210 -DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG--------------------------- 241
            +   WNAM+ GYA      +A+ +  SM  E                            
Sbjct: 302 KNTISWNAMLAGYAQNSRSSDAIQLFRSMDLEAQCKEEDVVLWTTMLGGYSDRGDHAAAL 361

Query: 242 -------ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
                  I  D   F+ A+  C+       G +I   I     E    +  AL  M+ + 
Sbjct: 362 ELFREMRIKPDAIAFVAAIDACANAGSIRDGEEILARIRGCGCESDDRVGTALCYMFAQF 421

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +D A ++F+R+  K  ISWN + G  +      +   LF + +  GSRP+ +TF+ +L
Sbjct: 422 GLLDRASQIFDRLESKSAISWNAMLGAMAAQGLAIEAMELFRRMLGEGSRPDEITFAAML 481

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                   L  G  +  L    G      + ++L+ M+ +CG++  + ++F N+S++N  
Sbjct: 482 DCFVGQSSLGEGRFVHGLIAESGRDRGVFLGTALLNMYGKCGSLADSIAIFANLSHRNTI 541

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +WN L++ +  N    + L  F  +   G   N  TF  V+  C
Sbjct: 542 SWNALIAAHASNGRFLESLDLFQELQNEGFLANTITFQSVIAAC 585



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 11/166 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I  A  L       S   G  VHG I + G    +FL   L+ MY KCG     + 
Sbjct: 471 RPDEITFAAMLDCFVGQSSLGEGRFVHGLIAESGRDRGVFLGTALLNMYGKCGSLADSIA 530

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F  ++ RN +SW  +++A   NG F   L ++ +++  GF+ N     SV+  C   G 
Sbjct: 531 IFANLSHRNTISWNALIAAHASNGRFLESLDLFQELQNEGFLANTITFQSVIAACGHAGL 590

Query: 161 SEFGYSIHCFALKIRIEKNPFV------GCSVLNFYAKLGDVAAAE 200
           ++ G    C  + + IE +  V      GC +++   + G +  AE
Sbjct: 591 ADRG----CDYMVLMIEDHGIVPLPEHYGC-MIDLLGRAGWLGEAE 631


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 191/718 (26%), Positives = 339/718 (47%), Gaps = 7/718 (0%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  L +  + +S  LG +VH  I K       F+ + L+ MY  CG        FD M  
Sbjct: 2   ADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMPV 61

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-VSMGASEFGYS 166
           ++ ++W  ++ A  Q G+ +  L ++  M+  G  P      +V+  C       E G  
Sbjct: 62  QDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGRR 121

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH       +E + +V  ++L+ Y K   V  A +VF  I    V  WNAMI  YA   +
Sbjct: 122 IHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQDH 181

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIV 284
             +A+ V  +ML EG+  ++ TFI  L  CS + D ++ + +   +   E +     S  
Sbjct: 182 HEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSFA 241

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL++ Y     ++ AF+ F R    ++I    +   +++ +   +   LF   +L G +
Sbjct: 242 TALVNFYGSCGDLEQAFRAFSRHR-LELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + +    +L  C     L+ G  +        F    N  ++LI M+ +CG++E A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++ ++++ +WN +++ +  +    + L     +   GV+ +  +F   +  C  SE  
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                IH  I+++G  +   + ++++  Y +    D++       +  D  SW AM++A 
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAY 480

Query: 525 VHQGH-NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
             Q   + EA+ +F  +   G  PD       L++CAA  +    K +H  + + G  + 
Sbjct: 481 AAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESN 540

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + VA+AV++ YAK G +  AR  F +     DVI +N +I A+A HG   + +  F +M 
Sbjct: 541 MTVANAVLNMYAKSGTLVLARKMFGK-MPLPDVISWNGMISAFAQHGHADQVLRFFRRMN 599

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG-MQPSPDCYGCLVDMLSRNGY 702
                P+  TFVSV+SACSH GLV  G  LF S+   +  + P  + Y C+VD+++R G 
Sbjct: 600 HEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIARAGK 659

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L+ A+  I   P +P   ++ ++L   ++H + E    ++E L+ L P   AA+V+LS
Sbjct: 660 LDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVVLS 717



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 28/337 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I    +L L    ++   G  +H  IV+ G   D+ L N ++ MY  C       
Sbjct: 400 VKADKISFVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDAS 459

Query: 100 RVFDEMAERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           RVF  M  R+ VSW  +++A A Q       L ++  M+ +GFMP+  +  + +  C + 
Sbjct: 460 RVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQ 519

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +   G  +H    +  +E N  V  +VLN YAK G +  A ++F  +   DV  WN MI
Sbjct: 520 ASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMI 579

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             +A  G+  + L     M  EG   +  TF++ +  CS           HG +++  V+
Sbjct: 580 SAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSACS-----------HGGLVKDGVQ 628

Query: 279 CSISIVN-------------ALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSE 324
             +S+++              ++D+  ++  +D A K       K D +  +T+ G    
Sbjct: 629 LFVSLLHDFPTISPRAEHYYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKV 688

Query: 325 NKNPGQT-ASLFHKFILSGSR-PNHVTFSILLRQCGK 359
           +K+  +   S  H   L+  R   +V  S L  + GK
Sbjct: 689 HKDVERARKSAEHLMELTPDRSAAYVVLSNLYDEVGK 725


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 174/649 (26%), Positives = 304/649 (46%), Gaps = 65/649 (10%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E N      ++N YAKLG ++ AE +F  +   DV  WN ++ GY   G   +A+    S
Sbjct: 92  EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVS 151

Query: 237 MLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM----- 290
           M   G ++ + +TF  A++ C  +   ++  Q+ GL+ +   +    +   ++DM     
Sbjct: 152 MRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCG 211

Query: 291 --------------------------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
                                     Y KS G+D+A ++FE M ++DV+SWN +    S+
Sbjct: 212 AVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQ 271

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           +    +  S+       G R +  T++  L  C KL  L  G QL    +      +  V
Sbjct: 272 SGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYV 331

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S+++ ++ +CG  + A  VF ++  +N  +W  L+ G+    C ++ L+ F  +    +
Sbjct: 332 ASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELM 391

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-- 502
            V+      ++  C    +  +  Q+H   +K+G +    I +SLI  Y   G L N+  
Sbjct: 392 TVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAES 451

Query: 503 -----------------------------FEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
                                         EF +G    ++ +W AM+ A +  G   + 
Sbjct: 452 IFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDG 511

Query: 534 VTIFHS-LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + ++ + L E    PD     T+   CA +GA +    I    +K+G   +  V +AVI 
Sbjct: 512 LKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVIT 571

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG I  AR  FD   +  D++ +N +I  Y+ HG+  +A+EIFD M     +P   
Sbjct: 572 MYSKCGRISEARKIFD-FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYI 630

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           ++V+V+S+CSH GLV +G   F  +   + + P  + + C+VD+L+R G L +AK++I+ 
Sbjct: 631 SYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDE 690

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           MP +P+  V+ +LLS C+ HGN EL E A++ L  L   +   ++LL+K
Sbjct: 691 MPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAK 739



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/662 (23%), Positives = 275/662 (41%), Gaps = 99/662 (14%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYF--GWGL------------------------- 99
           HG +V +G  + +FLQN L+  Y  CG      GL                         
Sbjct: 51  HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110

Query: 100 -----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMK 153
                 +F  M  R++ SW  ++S   Q+G F   ++ +V M+ +G  +PN F  G  MK
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            C ++G  E    +     K   + +P V   +++ + + G V  A + F  I    V C
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230

Query: 214 WNAMIGGYA-------------------------------HCGYGFEALNVVSSMLFEGI 242
            N+M+ GYA                                 G   EAL+V   M   G+
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T+ ++L  C+ ++    G+Q+H  +IRS       + +A++++Y K      A +
Sbjct: 291 RLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARR 350

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  + D++ +SW  L GGF +     ++  LF++        +    + ++  C   +D
Sbjct: 351 VFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMD 410

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV------------------ 404
           + L  QL  L+L  G      +++SLI M+ +CG ++ A S+                  
Sbjct: 411 MCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTA 470

Query: 405 -------------FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCT 450
                        FD +S +N+ TWN +L  Y  +  + D LK +  +  E  V  +  T
Sbjct: 471 YSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVT 530

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  +   C      ++  QI G  +K G      + +++I  Y   G++  + +  +   
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           R D+ SW AM++     G   +A+ IF  +++ G KPD      +L+SC+  G  Q  K 
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGK- 649

Query: 571 IHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
            +  ++K   N    +   S ++D  A+ G++  A+   D+        V+  L+ A   
Sbjct: 650 FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKT 709

Query: 629 HG 630
           HG
Sbjct: 710 HG 711



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 223/494 (45%), Gaps = 44/494 (8%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +F +N+++A Y+K       L +F+ M ER++VSW ++VSA  Q+G     L + VDM  
Sbjct: 228 VFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHN 287

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G   +     S +  C  + +  +G  +H   ++     +P+V  +++  YAK G    
Sbjct: 288 RGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKE 347

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A RVF S+   +   W  +IGG+   G   E+L + + M  E +T+D++     + GCS 
Sbjct: 348 ARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN 407

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
             D  + RQ+H L ++S    ++ I N+LI MY K   +  A  +F  M ++D++SW  +
Sbjct: 408 RMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGM 467

Query: 319 FGGFSENKNPGQTASLFH---------------KFILSGSR-----------------PN 346
              +S+  N G+    F                 +I  G+                  P+
Sbjct: 468 LTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPD 527

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT+  L R C  +    LG Q+    +  G + + +V +++I M+ +CG +  A  +FD
Sbjct: 528 WVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFD 587

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ- 465
            +S K++ +WN +++GY  +      ++ F ++ + G + +  ++  V+ +C  S   Q 
Sbjct: 588 FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQE 647

Query: 466 ------MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                 M+ + H         SC     +   + +    L +       AE      WGA
Sbjct: 648 GKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAE-----VWGA 702

Query: 520 MMSALVHQGHNHEA 533
           ++SA    G+N  A
Sbjct: 703 LLSACKTHGNNELA 716



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 193/433 (44%), Gaps = 66/433 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + ++ +Y+KCG F    
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEAR 349

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF  + +RN VSWT+++   +Q G F   L+++  M+      ++FA+ +++  C +  
Sbjct: 350 RVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRM 409

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS-------------- 205
                  +H  +LK    +   +  S+++ YAK G++  AE +F S              
Sbjct: 410 DMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLT 469

Query: 206 -----------------ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
                            +S+ +V  WNAM+G Y   G   + L + S+ML E  +  D  
Sbjct: 470 AYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWV 529

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  ++  +    S++NA+I MY K   +  A K+F+ +
Sbjct: 530 TYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFL 589

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
           + KD++SWN +  G+S++    Q   +F   +  G++P+++++  +L  C          
Sbjct: 590 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCS--------- 640

Query: 368 QLQCLALHCGFLDE-----------ENVTSSLIYMFC------RCGAVEMAHSVFDNVSY 410
                  H G + E            NV+  L +  C      R G +  A ++ D +  
Sbjct: 641 -------HSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPM 693

Query: 411 KNIT-TWNELLSG 422
           K     W  LLS 
Sbjct: 694 KPTAEVWGALLSA 706



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 207/478 (43%), Gaps = 43/478 (8%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T ++A   C  + D        GL+     E ++   N +++ Y K   +  A ++F RM
Sbjct: 68  TLLHAYLSCGALPD------ARGLLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRM 121

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLG 366
             +DV SWNTL  G+ ++         F     SG S PN  TF   ++ CG L   ++ 
Sbjct: 122 PRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVA 181

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH------------------------ 402
           LQL  L    GF  + +V + ++ MF RCGAV+ A                         
Sbjct: 182 LQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKS 241

Query: 403 -------SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
                   +F+++  +++ +WN ++S    +    + L    ++   GV ++  T+   +
Sbjct: 242 YGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSL 301

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C +  +     Q+H  +I++      Y+ S++++ Y   G    +    +     +  
Sbjct: 302 TACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTV 361

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  ++   +  G   E++ +F+ +       D++ L TI++ C+        + +H   
Sbjct: 362 SWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLS 421

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           +K G    V +++++I  YAKCG+++ A   F  S    D++ +  ++ AY+  G + +A
Sbjct: 422 LKSGHTRAVVISNSLISMYAKCGNLQNAESIF-SSMEERDIVSWTGMLTAYSQVGNIGKA 480

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
            E FD M   N+     T+ +++ A    G  + G  ++ +M ++  + P    Y  L
Sbjct: 481 REFFDGMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 40/212 (18%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L   L SC A GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR       
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ----------------------- 648
              +VI +N ++  YA  G +S+A E+F +M   ++                        
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 649 ---------PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
                    P+  TF   M +C   G  +    L   + +++G Q  PD    +VDM  R
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLL-GLLTKFGFQGDPDVATGIVDMFVR 209

Query: 700 NGYLEDA-KHVIEIMPFQPSPTVY--RSLLSG 728
            G ++ A K   +I      PTV+   S+L+G
Sbjct: 210 CGAVDFASKQFSQI----ERPTVFCRNSMLAG 237


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 295/571 (51%), Gaps = 8/571 (1%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AAA RVF  +   D   WNA++  +A  G   EA  ++ +M  +G+  + +   +AL+ 
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            ++     IG Q+  L ++S +  ++   +AL+D+Y K   +  A +VF+ M +++ +SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L  G++E+ +      LF +    G  P+  TF+ LL    +     L  QL    + 
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAV-EGPSCFLMHQLHGKIVK 221

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLK 434
            G      V ++ I  + +CG+++ +  +FD +   +++ +WN +L  Y  N  D + +K
Sbjct: 222 YGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMK 281

Query: 435 TFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKS 492
            F  +  ESGV  +  +F  ++ +C    +    G+ IHG +IK+       +C++LI  
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341

Query: 493 YVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           Y  + +   ++++++  N     D  SW +M++     G + +A+  F  +     + DE
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           Y     L S + +   Q  K IH  VI  GF +  +V+S++I  Y+K G I  AR +F++
Sbjct: 402 YAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE 461

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +  S+ V  +N +I  YA HG       +F++M          TFV ++++CSH GLVD+
Sbjct: 462 ADKSSSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDE 520

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +  +M+++YG+    + Y C VD+  R G L+ AK +I+ MPF+P   V+ +LL  C
Sbjct: 521 GSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGAC 580

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHGN EL    +  L +  P+  + +VLLS
Sbjct: 581 RIHGNVELASDVASHLFVAEPRQHSTYVLLS 611



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/616 (25%), Positives = 276/616 (44%), Gaps = 14/616 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL--RVFDEMAERNLVSWTLIVS 118
           V   + H  ++K GF       N L+  YS+    G     RVFDE+  R+ VSW  +++
Sbjct: 8   VAAARSHASLLKSGFAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLA 66

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A   +G      ++   M   G   N FA+GS ++          G  +   ALK  +  
Sbjct: 67  AHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLAN 126

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N F   ++L+ YAK G V  A +VF  +   +   WNA+I GY   G    AL +   M 
Sbjct: 127 NVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEME 186

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            EG+  D+ TF + L      + F +  Q+HG I++      ++++NA I  Y +   + 
Sbjct: 187 REGLVPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLK 245

Query: 299 YAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQ 356
            + ++F+ + D +D+ISWN + G ++ N    +    F + +  SG  P+  +F+ ++  
Sbjct: 246 DSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISS 305

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKN 412
           C +   D   G  +  L +         V ++LI M+ R      +E A+  F+++  K+
Sbjct: 306 CSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKD 365

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             +WN +L+GY  +   AD LK F  +    V  +   F   + +       Q+  QIHG
Sbjct: 366 TVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHG 425

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +I +GF+S  ++ SSLI  Y   G +D++ +    A++     W AM+      G    
Sbjct: 426 LVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAEN 485

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVI 591
              +F+ +++     D      ++ SC+  G       I +    K G    +   +  +
Sbjct: 486 VDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGV 545

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y + G +  A+   D      D +V+ TL+ A   HG V  A ++   + +A  +P Q
Sbjct: 546 DLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVA--EPRQ 603

Query: 652 -ATFVSVMSACSHKGL 666
            +T+V + S  S  G+
Sbjct: 604 HSTYVLLSSMYSGLGM 619



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 241/511 (47%), Gaps = 34/511 (6%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHG 68
           L A   +   H    R+ R        S++F       L  +L  +   +   +G Q+  
Sbjct: 64  LLAAHAASGAHPEAWRLLRAMHAQGLASNTFA------LGSALRSAAVARRPAIGAQLQS 117

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
             +K G  N++F  + L+ +Y+KCG      +VFD M ERN VSW  +++   ++G+   
Sbjct: 118 LALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMAS 177

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L+++++M+  G +P+E    S++      G S F   +H    KI ++    +G +VLN
Sbjct: 178 ALELFLEMEREGLVPDEATFASLLTAV--EGPSCF--LMHQLHGKI-VKYGSALGLTVLN 232

Query: 189 ----FYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GI 242
                Y++ G +  + R+F  I    D+  WNAM+G Y H G   EA+     M+ E G+
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292

Query: 243 TMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG---MD 298
             D Y+F + +  CS    D   GR IHGL+I+S +E    + NALI MY + +    M+
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A+K F  +  KD +SWN++  G+S++         F        R +   FS  LR   
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +L  L LG Q+  L +H GF   + V+SSLI+M+ + G ++ A   F+     +   WN 
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---H 471
           ++ GY  +    +V   F  + +    ++  TF  ++ +C  +    E  +++  +   +
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G  ++    +CG      +  Y   GQLD +
Sbjct: 533 GVPLRMEHYACG------VDLYGRAGQLDKA 557


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 179/722 (24%), Positives = 346/722 (47%), Gaps = 31/722 (4%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L    SLS NL+    G  +H  I+  G  +D ++ ++LI +Y KCG F   ++VFD
Sbjct: 57  PSLLKACASLS-NLQ---YGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD 112

Query: 104 EMAER-----NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           ++ +      ++  W  I+    + G+ + G+  +  M+++G+                 
Sbjct: 113 QLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY----------------- 155

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAM 217
              + G  IH + ++  +  +PF+  ++++ Y K G    A  +F  +    ++  WN M
Sbjct: 156 ---KEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           IGG+   G    +L        E + +   +F   L  C        G+Q+H   I+   
Sbjct: 213 IGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGF 272

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E    +  +L+ MY K   ++ A KVF  + DK++  WN L   +  N        ++ +
Sbjct: 273 EDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQ 332

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             L     +  T   +L         DLG  +    +         + S+L+ M+ + G 
Sbjct: 333 MKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGD 392

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
              A+S+F  +  +++  W  ++SG+C N    + L  F  +    V+ +      ++  
Sbjct: 393 SNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISA 452

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C   E   +   IHG +IK+G     ++ SSL+  Y  FG  + +    +     ++ +W
Sbjct: 453 CTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAW 512

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            +++S          ++ +F  ++     PD     ++L + +++ A  + KS+H ++++
Sbjct: 513 NSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVR 572

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           L    ++ V + +ID Y KCG +K A+  F++  +  +++ +N++I  Y  HG  S+A+E
Sbjct: 573 LWIPFDLQVENTLIDMYIKCGLLKYAQHIFER-ISEKNLVAWNSMIGGYGSHGECSKAIE 631

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +FD+M+ + ++P   TF+S++S+C+H GL+++G  LF+ M  ++G++P  + Y  +VD+ 
Sbjct: 632 LFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLY 691

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            R G L DA   ++ MP +P  +++ SLL  C+IH N ELGE  + KLL + P   + +V
Sbjct: 692 GRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYV 751

Query: 758 LL 759
            L
Sbjct: 752 QL 753



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 298/632 (47%), Gaps = 10/632 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
           G Q+H +IV+     D FL+  LI  Y KCG       +F ++ +R N+V+W +++    
Sbjct: 158 GKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFG 217

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG ++  L+ Y+  KT        +    +  C       FG  +HC A+K+  E +P+
Sbjct: 218 ENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPY 277

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+L  Y K   + +AE+VF  +   ++  WNA+I  Y   GY ++AL +   M    
Sbjct: 278 VHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCT 337

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D +T +N L   S+   +D+GR IH  I++  ++ SI+I +AL+ MY K    +YA 
Sbjct: 338 VLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYAN 397

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  M ++DV++W ++  GF +N+   +    F        +P+    + ++  C  L 
Sbjct: 398 SIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLE 457

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +DLG  +    +  G   +  V SSL+ M+ + G  E A ++F ++  KN+  WN ++S
Sbjct: 458 KVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIIS 517

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            YC N      +  F  +  + +  +  +F  V+              +HG +++     
Sbjct: 518 CYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPF 577

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++LI  Y+  G L  +          ++ +W +M+      G   +A+ +F  + 
Sbjct: 578 DLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMR 637

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF-VIKLGFNTEVYVASAV--IDAYAKCG 598
            +G KPD+    ++L+SC   G  +  + +H F ++K+ F  E  +   V  +D Y + G
Sbjct: 638 SSGIKPDDVTFLSLLSSCNHSGLIE--EGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAG 695

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSV 657
            +  A           D  ++ +L+ +   H L  E  E+    KL N++PS+ + +V +
Sbjct: 696 CLGDAYSFVKNMPVEPDRSIWLSLLCSCKIH-LNLELGEMVAN-KLLNMEPSKGSNYVQL 753

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           ++      L D+   L  SM  + G++ +P C
Sbjct: 754 LNLYGEAELWDRTANLRASMKEK-GLKKTPGC 784



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 141/283 (49%), Gaps = 2/283 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
            ++ D   +A  +S    L+   LG  +HG ++K G   D+F+ ++L+ MYSK G+    
Sbjct: 438 LVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERA 497

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             +F +M  +NLV+W  I+S   +N   D+ + ++  +  N   P+  +  SV+    S+
Sbjct: 498 GNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSV 557

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A   G S+H + +++ I  +  V  ++++ Y K G +  A+ +F  IS  ++  WN+MI
Sbjct: 558 AALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMI 617

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEV 277
           GGY   G   +A+ +   M   GI  D  TF++ L  C+     + G  +  ++ ++  +
Sbjct: 618 GGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGI 677

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
           E  +     ++D+Y ++  +  A+   + M  + D   W +L 
Sbjct: 678 EPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLL 720


>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 284/535 (53%), Gaps = 8/535 (1%)

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +++ +   G     +     +  C+      +G Q+H  II+   + ++ I +AL+DM
Sbjct: 64  LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A ++F+ M  ++V++WN+L  G+     P     LF + +  G  P   + 
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           S +L  C ++ D  LG+Q+  L++ CGF     V + LI ++ +   ++ +  +FD +  
Sbjct: 184 SAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPE 243

Query: 411 KNITTWNELLSGY--CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           +NI TW  +++GY  C     A VL    ++   G+ +N  T+  ++ +   S +     
Sbjct: 244 RNIITWTSMVAGYAHCQQPVAAMVLVR--DMQRLGIRLNYVTYNCLLSSFSSSNDLDHCK 301

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSY--VNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           Q+H  II+ G  S  Y+  +L+  Y   +   L++  +  +G  R D  SW A++  L +
Sbjct: 302 QVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSN 361

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G+   A+  F  + +AG   D +   ++L +   I      K IH  V+K G+ + + V
Sbjct: 362 LGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNV 421

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            + ++  YA+CG I  A+  F    + +DVI +N+L+   A+HG   EA+E+F++M+ + 
Sbjct: 422 QNGLVSMYARCGSINDAKRVFSL-MDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSG 480

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ-PSPDCYGCLVDMLSRNGYLED 705
           ++P   TF+ V+SAC H GL+DKG   F  M + Y ++ P+ + Y  +VD+ SR GYL +
Sbjct: 481 VKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSLESPTTEHYSSMVDLFSRAGYLSE 540

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A+  I  MP +P P+VY++LLS C++HGN E+    ++KLL + P +   +VLLS
Sbjct: 541 AEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCAKKLLQMCPNDPVIYVLLS 595



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 258/529 (48%), Gaps = 10/529 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G Q+H  I+K+GF +++++ + L+ MY KCG      R+FDEM  RN+V+W  ++S  +
Sbjct: 97  VGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYL 156

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G  ++ ++++++M   G  P  F+V +V+  C  M  ++ G  +H  ++K     N  
Sbjct: 157 HVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIV 216

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG  +++ Y+K  ++ A+  +F  +   ++  W +M+ GYAHC     A+ +V  M   G
Sbjct: 217 VGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLG 276

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK--SSGMDY 299
           I ++  T+   L   S   D D  +Q+H  IIR  +E +  +   L+ +Y +  SS ++ 
Sbjct: 277 IRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLED 336

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
             KV   +   D ISWN + GG S   N       F K   +G   +  TF+ +LR  G 
Sbjct: 337 FNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGM 396

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           +  LD G Q+  L L  G+    NV + L+ M+ RCG++  A  VF  +   ++ +WN L
Sbjct: 397 ISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSL 456

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           LSG  ++    + ++ F  +  SGV+ +  TF  VV + CR       G  +  +++  +
Sbjct: 457 LSGCAYHGYGREAVELFEQMRRSGVKPDNTTFL-VVLSACRHVGLLDKGLEYFDLMRNDY 515

Query: 480 SSCGYIC---SSLIKSYVNFGQLDNSFEFSNGAERLDMAS-WGAMMSALVHQGHNHEAVT 535
           S         SS++  +   G L  + +F N        S + A++SA    G+   AV 
Sbjct: 516 SLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVR 575

Query: 536 IFHSLVEAGEKPDEYILGTIL-NSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               L++    P++ ++  +L N  A +G +    SI   +   G   E
Sbjct: 576 CAKKLLQMC--PNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKE 622



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 135/587 (22%), Positives = 266/587 (45%), Gaps = 39/587 (6%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           LK+   ++ +G  P    +  ++  C   G+   G  +H   +K+  + N ++  ++++ 
Sbjct: 64  LKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDM 123

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G V++A+R+F  +   +V  WN++I GY H G    A+ +   M+  GI    ++ 
Sbjct: 124 YGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSV 183

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              L GC  + D  +G Q+HGL ++     +I +   LID+Y K   +D +  +F+ M +
Sbjct: 184 SAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPE 243

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +++I+W ++  G++  + P     L       G R N+VT++ LL       DLD   Q+
Sbjct: 244 RNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQV 303

Query: 370 QCLALHCGFLDEE--NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            C  +  G        VT   +Y  C   ++E  + V   V+  +  +WN ++ G     
Sbjct: 304 HCRIIREGLESNSYLEVTLVTVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLG 363

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                LK F  + ++G++++  TF  V+             QIH  ++K G+ S   + +
Sbjct: 364 NGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQN 423

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
            L+  Y   G ++++    +  +R D+ SW +++S   + G+  EAV +F  +  +G KP
Sbjct: 424 GLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKP 483

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D      +L++C  +G                          ++D   +  D+    M  
Sbjct: 484 DNTTFLVVLSACRHVG--------------------------LLDKGLEYFDL----MRN 513

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D S  S     Y++++  ++  G +SEA +  + M    ++P  + + +++SAC   G V
Sbjct: 514 DYSLESPTTEHYSSMVDLFSRAGYLSEAEDFINTMP---IEPGPSVYKALLSACQVHGNV 570

Query: 668 DKGCLLFKSMDSQYGMQPS-PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +      K +     M P+ P  Y  L ++ +  GY ++   + ++M
Sbjct: 571 EIAVRCAKKL---LQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVM 614



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 190/430 (44%), Gaps = 15/430 (3%)

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           D  S N+     ++ K       L  +    GS P     + ++  C K   + +G+QL 
Sbjct: 43  DFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLH 102

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +  GF     + S+L+ M+ +CGAV  A  +FD + ++N+ TWN L+SGY    C  
Sbjct: 103 STIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPE 162

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
             ++ F  + + G++    +   V+  C R E+ ++  Q+HG  +K GF     + + LI
Sbjct: 163 IAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLI 222

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y     +D S    +     ++ +W +M++   H      A+ +   +   G + +  
Sbjct: 223 DLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYV 282

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ- 609
               +L+S ++       K +H  +I+ G  +  Y+   ++  Y++C     +   F++ 
Sbjct: 283 TYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECS--SSSLEDFNKV 340

Query: 610 --SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
                  D I +N +I   ++ G    A++ F KM+ A +     TF SV+ A      +
Sbjct: 341 CSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMISTL 400

Query: 668 DKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
           D+G     L+ K+     G   + +    LV M +R G + DAK V  +M  +     + 
Sbjct: 401 DEGKQIHALVLKA-----GYGSNLNVQNGLVSMYARCGSINDAKRVFSLMD-RHDVISWN 454

Query: 724 SLLSGCRIHG 733
           SLLSGC  HG
Sbjct: 455 SLLSGCAYHG 464


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 186/704 (26%), Positives = 334/704 (47%), Gaps = 56/704 (7%)

Query: 63  GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G Q+H  IVK G  F  + +++  L+  Y+KC        +F  +  +N+ SW  ++   
Sbjct: 29  GRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLKNVFSWAAVIGLN 88

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G +   L  + +M+ NG +P+ F + +V+K C  +     G  +H            
Sbjct: 89  CRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH-----------G 137

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V C    +  K+      ++    +   +   WN+MI GY   G   EA+ V   M  E
Sbjct: 138 LVSCG---YVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREE 194

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   + T  + L   + +     G+Q H + +   +E + ++ ++LI+ Y K   ++ A
Sbjct: 195 GVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDA 254

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF RM +KDV++WN L  G+ +     +  ++ H   L   R + VT + L+     +
Sbjct: 255 ESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADM 314

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L LG +  C  +      +  V SS++ M+ +C  +  A  VF++   K++  WN +L
Sbjct: 315 RNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTML 374

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +              F  +  SG  +N    FY          Q  +  +   +I     
Sbjct: 375 AA-------------FAELGHSGEALN---LFY----------QMQLESVPPNVIS---- 404

Query: 481 SCGYICSSLIKSYVNFGQLDNS----FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
                 +SLI  ++N GQ++ +     +  +   + ++ +W  ++S L   G  +EA+  
Sbjct: 405 -----WNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILT 459

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  + EAG KP+   +  +L +C  + + Q  +++H ++I+      + +A++++D YAK
Sbjct: 460 FQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAK 519

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CGD   A+  FD      ++ +YN +I  +A HG   EA+ ++  +K   L+P   TF +
Sbjct: 520 CGDRDQAKRVFDM-IPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTN 578

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            + ACSH  +V +G  LF  M S + + PS + YGC+V +LSR G L++A  +I  MP++
Sbjct: 579 ALYACSHAMMVSEGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYK 638

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P   +  SLL+ CR H   EL E+ S +LL L P N   +V +S
Sbjct: 639 PDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNSGNYVAMS 682



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 234/564 (41%), Gaps = 70/564 (12%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           + L+  LS S NL +   G Q H   V  G      L ++LI  YSK G       VF  
Sbjct: 201 VTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSR 260

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M E+++V+W L++S  +Q GE D  L M   M+      +   + ++M     M   + G
Sbjct: 261 MLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLG 320

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
              HC+ ++  +E +  V  S+++ YAK   +  A RVF S  + D+  WN M+  +A  
Sbjct: 321 KEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAEL 380

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  EALN+   M  E +        N +   SL+  F    Q                V
Sbjct: 381 GHSGEALNLFYQMQLESVPP------NVISWNSLILGFLNSGQ----------------V 418

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N   DM+++   +             ++++W TL  G + +    +    F +   +G +
Sbjct: 419 NEAKDMFLQMQSLG---------VQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVK 469

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN V+   +L  C  L  L +G  L    +         + +SL+ M+ +CG  + A  V
Sbjct: 470 PNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRV 529

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +  K +  +N ++SG+  +    + L  +  + E G++ +  TF   +  C      
Sbjct: 530 FDMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACS----- 584

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
                 H  ++  G          L    V+   ++ S E            +G M+S L
Sbjct: 585 ------HAMMVSEGL--------ELFVDMVSNHNINPSIE-----------HYGCMVSLL 619

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTE 583
              G   EA  +  ++     KPD  ILG++L +C      +  + +   ++KL   N+ 
Sbjct: 620 SRCGDLDEAFGLISAM---PYKPDVQILGSLLAACREHNKIELEEYLSNQLLKLQPDNSG 676

Query: 584 VYVASAVIDAYAKCG---DIKGAR 604
            YVA +  +AYA  G   ++K  R
Sbjct: 677 NYVAMS--NAYAAAGRWDEVKKVR 698



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 215/468 (45%), Gaps = 27/468 (5%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADK 310
           LQGC        GRQIH  I++     +++  I   L+  Y K    + +  +F R+  K
Sbjct: 17  LQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLK 76

Query: 311 DVISWNTLFGGFSENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +V SW  +  G +  K   Q A L F +   +G  P++     +L+ CG L  + +G  +
Sbjct: 77  NVFSWAAVI-GLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVV 135

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L + CG++              +             +  +N   WN ++ GY  N  +
Sbjct: 136 HGL-VSCGYV-------------WKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLN 181

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            + ++ F  + E GVE    T    +         Q   Q H   +  G      + SSL
Sbjct: 182 EEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSL 241

Query: 490 IKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           I  Y   G ++++   FS   E+ D+ +W  ++S  V  G   +A+ + H +     + D
Sbjct: 242 INFYSKVGLIEDAESVFSRMLEK-DVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFD 300

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
              L T++++ A +   +  K  H + I+    ++V V S+++D YAKC  I  AR  F+
Sbjct: 301 SVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFN 360

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
            S  + D+I++NT++ A+A  G   EA+ +F +M+L ++ P+  ++ S++    + G V+
Sbjct: 361 SSI-TKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVN 419

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           +   +F  M S  G+QP+   +  L+  L+R+G+  +A     I+ FQ
Sbjct: 420 EAKDMFLQMQS-LGVQPNLVTWTTLISGLARSGFGYEA-----ILTFQ 461



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 169/382 (44%), Gaps = 50/382 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D + LA  +S   ++++  LG + H + ++    +D+ + ++++ MY+KC   G   
Sbjct: 297 LRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCAR 356

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF+    ++L+ W  +++A  + G     L ++  M+     PN  +  S+        
Sbjct: 357 RVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSL-------- 408

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS----DDVGCWN 215
                                     +L F    G V  A+ +F  + S     ++  W 
Sbjct: 409 --------------------------ILGFLNS-GQVNEAKDMFLQMQSLGVQPNLVTWT 441

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            +I G A  G+G+EA+     M   G+  +  + I  L  C  +A   IGR +HG +IR 
Sbjct: 442 TLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRH 501

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +  SI I  +L+DMY K    D A +VF+ + DK++  +N +  GF+ +    +  +L+
Sbjct: 502 SLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFALHGQAVEALALY 561

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS------LI 389
                 G +P+++TF+  L  C   + +  GL+     L    +   N+  S      ++
Sbjct: 562 RCLKEEGLKPDNITFTNALYACSHAMMVSEGLE-----LFVDMVSNHNINPSIEHYGCMV 616

Query: 390 YMFCRCGAVEMAHSVFDNVSYK 411
            +  RCG ++ A  +   + YK
Sbjct: 617 SLLSRCGDLDEAFGLISAMPYK 638



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGAR 604
           P+ Y  G +L  C    A    + IH  ++K G  F    Y+ + ++  YAKC + + + 
Sbjct: 10  PEVY--GELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASN 67

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             F +     +V  +  +I      G   EA+  F +M+   L P      +V+ AC
Sbjct: 68  SLF-RRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKAC 123


>gi|15225505|ref|NP_181492.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099847|sp|O80647.1|PP195_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g39620
 gi|3355489|gb|AAC27851.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254604|gb|AEC09698.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 191/713 (26%), Positives = 346/713 (48%), Gaps = 17/713 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I ++G  +D+++   L+ MY K        +VFD+M  +++V+W  +VS   Q
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG     L ++ DM++     +  ++ +++     +  S+    +H   +K       F+
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK-----KGFI 233

Query: 183 ---GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
                 +++ Y    D+ AAE VF  +   D   W  M+  YAH G+  E L +   M  
Sbjct: 234 FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             + M+K    +ALQ  + V D   G  IH   ++  +   +S+  +L+ MY K   ++ 
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++F  + D+DV+SW+ +   + +     +  SLF   +    +PN VT + +L+ C  
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAG 413

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           +    LG  + C A+      E    +++I M+ +CG    A   F+ +  K+   +N L
Sbjct: 414 VAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473

Query: 420 LSGYCFNCCDAD-VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
             GY     DA+     + N+   GV  +  T   +++TC    +      ++G IIK G
Sbjct: 474 AQGYT-QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTI 536
           F S  ++  +LI  +     L  +    +  G E+    SW  MM+  +  G   EAV  
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEK-STVSWNIMMNGYLLHGQAEEAVAT 591

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +     +P+      I+ + A + A +   S+H  +I+ GF ++  V ++++D YAK
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG I+ +   F +  N   ++ +NT++ AYA HGL S A+ +F  M+   L+P   +F+S
Sbjct: 652 CGMIESSEKCFIEISNKY-IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLS 710

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SAC H GLV++G  +F+ M  ++ ++   + Y C+VD+L + G   +A  ++  M  +
Sbjct: 711 VLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGN 769
            S  V+ +LL+  R+H N  L   A  +L+ L P N + +   S+ +R  E N
Sbjct: 771 TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY---SQDRRLGEVN 820



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 207/399 (51%), Gaps = 1/399 (0%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G  +H + V+ G   D+ +  +L++MYSKCG      ++F  + +R++VSW+ ++++ 
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G+ D  + ++ DM      PN   + SV++ C  + AS  G SIHC+A+K  IE   
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL 436

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
               +V++ YAK G  + A + F  +   D   +NA+  GY   G   +A +V  +M   
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D  T +  LQ C+  +D+  G  ++G II+   +    + +ALI+M+ K   +  A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
             +F++   +K  +SWN +  G+  +    +  + F +  +   +PN VTF  ++R   +
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L +G+ +    + CGF  +  V +SL+ M+ +CG +E +   F  +S K I +WN +
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTM 676

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           LS Y  +   +  +  F ++ E+ ++ +  +F  V+  C
Sbjct: 677 LSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/671 (24%), Positives = 300/671 (44%), Gaps = 11/671 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVHG ++  G        N LI  YS          +FD + +  +V W  ++    + G
Sbjct: 23  QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                L  +  M +  G  P++++    +K C      + G  IH    ++ +E + ++G
Sbjct: 79  LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K  D+ +A +VF  +   DV  WN M+ G A  G    AL +   M    + 
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  +  N +   S +   D+ R +HGL+I+     + S  + LIDMY   + +  A  V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESV 256

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE +  KD  SW T+   ++ N    +   LF        R N V  +  L+    + DL
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G+ +   A+  G + + +V +SL+ M+ +CG +E+A  +F N+  +++ +W+ +++ Y
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + +  F ++    ++ N  T   V++ C      ++   IH   IK    S  
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL 436

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
              +++I  Y   G+   + +        D  ++ A+       G  ++A  ++ ++   
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD   +  +L +CA    Y R   ++  +IK GF++E +VA A+I+ + KC  +  A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
            + FD+       + +N ++  Y  HG   EA+  F +MK+   QP+  TFV+++ A + 
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEIMPFQPSPTVY 722
              +  G  +  S+  Q G          LVDM ++ G +E + K  IEI         +
Sbjct: 617 LSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS--NKYIVSW 673

Query: 723 RSLLSGCRIHG 733
            ++LS    HG
Sbjct: 674 NTMLSAYAAHG 684



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 58/114 (50%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           +  L +  +G  VH  +++ GF +   + N+L+ MY+KCG      + F E++ + +VSW
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
             ++SA   +G     + +++ M+ N   P+  +  SV+  C   G  E G  I
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 169/589 (28%), Positives = 293/589 (49%), Gaps = 4/589 (0%)

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           R+  +      +  ++    ++  A  VF  I    V  WN MI  YA  G   +++ + 
Sbjct: 36  RVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLY 95

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  G+T   +TF   L+ CS +    +GR IH       +   + +  AL+ MY K 
Sbjct: 96  LHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKC 155

Query: 295 SGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
             +  A  +F  ++  D+D+++WN +   FS +    QT     +   +G  PN  T   
Sbjct: 156 GHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVS 215

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L   G+   L  G  +    +   F D   + ++L+ M+ +C  +  A  +F+ V+ KN
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKN 275

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
              W+ ++ GY  +   +D L  + ++    G+     T   ++  C +  + +   ++H
Sbjct: 276 DVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLH 335

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             +IK+G      + +SLI  Y   G +DN+  F +     D  S+ A++S  V  G+  
Sbjct: 336 CHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAE 395

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+ IF  +  +G  P    +  +L +C+ + A Q     H + +  GF  +  + +A+I
Sbjct: 396 KALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAII 455

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y+KCG I  +R  FD+  N  D+I +NT+I+ Y  HGL  EA+ +F +++   L+P  
Sbjct: 456 DMYSKCGKITISREIFDRMQN-RDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDD 514

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            T ++V+SACSH GLV +G   F SM   + ++P    Y C+VD+L+R G L++A   I+
Sbjct: 515 VTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQ 574

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            MPF P+  ++ +LL+ CR H N E+GE  S+K+ LL P+     VL+S
Sbjct: 575 RMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMS 623



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/595 (25%), Positives = 275/595 (46%), Gaps = 10/595 (1%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD++ + ++V W +++     +G F   + +Y+ M   G  P  F    ++K C S+ A
Sbjct: 63  VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQA 122

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMI 218
            + G  IH  A  + +  + +V  ++L+ YAK G +  A+ +F SIS    D+  WNAMI
Sbjct: 123 LQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMI 182

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             ++      + ++ V+ M   G+T +  T ++ L           G+ IH   IR+   
Sbjct: 183 AAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFF 242

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ +  AL+DMY K   + YA K+F  +  K+ + W+ + GG+  + +     +L+   
Sbjct: 243 DNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDM 302

Query: 339 I-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           + + G  P   T + +LR C +L DL  G +L C  +  G   +  V +SLI M+ +CG 
Sbjct: 303 LCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGI 362

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A    D +  K+  +++ ++SG   N      L  F  +  SG+     T   ++  
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPA 422

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C      Q     HG  +  GF++   IC+++I  Y   G++  S E  +  +  D+ SW
Sbjct: 423 CSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISW 482

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
             M+      G   EA+++F  L   G KPD+  L  +L++C+  G     K     + +
Sbjct: 483 NTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQ 542

Query: 578 LGFNTEVYVASAV--IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
             FN +  +A  +  +D  A+ G++  A     +     +V ++  L+ A   H  +   
Sbjct: 543 -NFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMG 601

Query: 636 MEIFDKMKLANLQPS-QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            ++  K++L  L P     FV + +  S  G  D    + +S+   +G + SP C
Sbjct: 602 EQVSKKIQL--LGPEGTGNFVLMSNIYSSVGRWDDAAYI-RSIQRHHGYKKSPGC 653



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 230/499 (46%), Gaps = 40/499 (8%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           FL K+ S   +L++  LG  +H H   LG + D+++   L+ MY+KCG+      +F+ +
Sbjct: 112 FLLKACS---SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSI 168

Query: 106 A--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +  +R++V+W  +++A   +      +     M+  G  PN   + S++       A   
Sbjct: 169 SHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQ 228

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G +IH + ++     N  +  ++L+ YAK   +  A ++F +++  +  CW+AMIGGY  
Sbjct: 229 GKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVL 288

Query: 224 CGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                +AL +   ML   G+     T    L+ C+ + D   G+++H  +I+S ++   +
Sbjct: 289 HDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT 348

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+LI MY K   MD A    + M  KD +S++ +  G  +N    +   +F +   SG
Sbjct: 349 VGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSG 408

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P   T   LL  C  L  L  G       +  GF ++ ++ +++I M+ +CG + ++ 
Sbjct: 409 IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISR 468

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +FD +  ++I +WN ++ GY  +    + L  F  +   G++ +  T   V+  C    
Sbjct: 469 EIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACS--- 525

Query: 463 NQQMVGQIHGAIIKTG---FSSCG-----------YICSSLIKSYVNFGQLDNSFEFSNG 508
                   H  ++  G   FSS             YIC  ++      G LD ++ F   
Sbjct: 526 --------HSGLVTEGKYWFSSMSQNFNIKPRMAHYIC--MVDLLARAGNLDEAYTF--- 572

Query: 509 AERLDMAS----WGAMMSA 523
            +R+        WGA+++A
Sbjct: 573 IQRMPFVPNVRIWGALLAA 591



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 135/290 (46%), Gaps = 2/290 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L   P  LA  L     L     G ++H H++K G   D  + N+LI+MY+KCG     +
Sbjct: 308 LNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAV 367

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
              DEM  ++ VS++ I+S  +QNG  +  L ++  M+++G  P    + +++  C  + 
Sbjct: 368 GFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLA 427

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A + G   H + +      +  +  ++++ Y+K G +  +  +F  + + D+  WN MI 
Sbjct: 428 ALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMII 487

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
           GY   G   EAL++   +   G+  D  T I  L  CS       G+     + ++  ++
Sbjct: 488 GYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIK 547

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
             ++    ++D+  ++  +D A+   +RM    +V  W  L      +KN
Sbjct: 548 PRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKN 597


>gi|15227389|ref|NP_179312.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|4584344|gb|AAD25139.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330251504|gb|AEC06598.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 181/557 (32%), Positives = 303/557 (54%), Gaps = 17/557 (3%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F G S+ +FY K GD+ +  R F  ++S D   WN ++ G    G+  E L   S +   
Sbjct: 62  FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDY 299
           G   +  T +  +  C  +  FD G +IHG +IRS   C IS V N+++ MY  S  +  
Sbjct: 122 GFEPNTSTLVLVIHACRSLW-FD-GEKIHGYVIRSGF-CGISSVQNSILCMYADSDSLS- 177

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCG 358
           A K+F+ M+++DVISW+ +   + ++K P     LF + +    + P+ VT + +L+ C 
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237

Query: 359 KLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            + D+D+G  +   ++  GF L +  V +SLI M+ +   V+ A  VFD  + +NI +WN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +L+G+  N    + L+ F  + +  VEV+  T   ++  C   E       IHG II+ 
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+ S     SSLI +Y +   +D++    +     D+ S   M+S L H G + EA++IF
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--LGFNTEVYVASAVIDAYA 595
             +    + P+   + ++LN+C+     + +K  H   I+  L  N ++ V ++++DAYA
Sbjct: 418 CHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSIVDAYA 473

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG I+ AR  FDQ     ++I +  +I AYA +GL  +A+ +FD+MK     P+  T++
Sbjct: 474 KCGAIEMARRTFDQ-ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYL 532

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP- 714
           + +SAC+H GLV KG ++FKSM  +   +PS   Y C+VDMLSR G ++ A  +I+ +P 
Sbjct: 533 AALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPE 591

Query: 715 -FQPSPTVYRSLLSGCR 730
             +   + + ++LSGCR
Sbjct: 592 DVKAGASAWGAILSGCR 608



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 237/482 (49%), Gaps = 42/482 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG++++ GF     +QN+++ MY+         ++FDEM+ER+++SW++++ + +Q
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 202

Query: 123 NGEFDMGLKMYVDM----KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE- 177
           + E  +GLK++ +M    KT    P+   V SV+K C  M   + G S+H F+++   + 
Sbjct: 203 SKEPVVGLKLFKEMVHEAKTE---PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + FV  S+++ Y+K  DV +A RVF   +  ++  WN+++ G+ H     EAL +   M
Sbjct: 260 ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLM 319

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           + E + +D+ T ++ L+ C         + IHG+IIR   E +   +++LID Y   S +
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A  V + M  KDV+S +T+  G +      +  S+F         PN +T   LL  C
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM---RDTPNAITVISLLNAC 436

Query: 358 GKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
               DL        +A+     +++ +V +S++  + +CGA+EMA   FD ++ KNI +W
Sbjct: 437 SVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISW 496

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++S Y  N      L  F  + + G   N  T+   +  C            HG ++K
Sbjct: 497 TVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACN-----------HGGLVK 545

Query: 477 TGF-------------SSCGYICSSLIKSYVNFGQLDNSFEF-SNGAE--RLDMASWGAM 520
            G              S   Y C  ++      G++D + E   N  E  +   ++WGA+
Sbjct: 546 KGLMIFKSMVEEDHKPSLQHYSC--IVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAI 603

Query: 521 MS 522
           +S
Sbjct: 604 LS 605



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 247/529 (46%), Gaps = 11/529 (2%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +F  N++   Y KCG    GLR FD M  R+ VSW +IV   +  G  + GL  +  ++ 
Sbjct: 61  LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            GF PN   +  V+  C S+     G  IH + ++        V  S+L  YA   D  +
Sbjct: 121 WGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSVQNSILCMYAD-SDSLS 177

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT-MDKYTFINALQGCS 257
           A ++F  +S  DV  W+ +I  Y         L +   M+ E  T  D  T  + L+ C+
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237

Query: 258 LVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           ++ D D+GR +HG  IR   + + + + N+LIDMY K   +D AF+VF+    ++++SWN
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALH 375
           ++  GF  N+   +   +FH  +      + VT   LLR C K  +  L  + +  + + 
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-KFFEQPLPCKSIHGVIIR 356

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G+   E   SSLI  +  C  V+ A +V D+++YK++ + + ++SG        + +  
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICSSLIKSYV 494
           FC++ ++    N  T   ++  C  S + +     HG  I+   +     + +S++ +Y 
Sbjct: 417 FCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G ++ +    +     ++ SW  ++SA    G   +A+ +F  + + G  P+      
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLA 533

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
            L++C   G  ++   I   +++      +   S ++D  ++ G+I  A
Sbjct: 534 ALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTA 582



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 177/375 (47%), Gaps = 19/375 (5%)

Query: 62  LGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +G  VHG  ++ GF   D+F+ N+LI MYSK        RVFDE   RN+VSW  I++  
Sbjct: 244 VGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGF 303

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + N  +D  L+M+  M       +E  V S+++VC          SIH   ++   E N 
Sbjct: 304 VHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNE 363

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
               S+++ Y     V  A  V  S++  DV   + MI G AH G   EA+++   M   
Sbjct: 364 VALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHM--- 420

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDY 299
             T +  T I+ L  CS+ AD    +  HG+ IR  +  + IS+  +++D Y K   ++ 
Sbjct: 421 RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEM 480

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A + F+++ +K++ISW  +   ++ N  P +  +LF +    G  PN VT+   L  C  
Sbjct: 481 ARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNH 540

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVT-----SSLIYMFCRCGAVEMAHSVFDNVS---YK 411
                 GL  + L +    ++E++       S ++ M  R G ++ A  +  N+      
Sbjct: 541 -----GGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKA 595

Query: 412 NITTWNELLSGYCFN 426
             + W  +LSG C N
Sbjct: 596 GASAWGAILSG-CRN 609



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/460 (21%), Positives = 188/460 (40%), Gaps = 69/460 (15%)

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W  +  G+SE +  G   +            +   F I+ + C KL  L  G        
Sbjct: 25  WREVVSGYSEIQRAGVQFN------------DPFVFPIVFKACAKLSWLFQG-------- 64

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
                      +S+   + +CG +      FD ++ ++  +WN ++ G      + + L 
Sbjct: 65  -----------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 113

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
            F  +   G E N  T   V+  C    +    G+ IHG +I++GF     + +S++  Y
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMY 170

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYIL 552
            +   L     F   +ER D+ SW  ++ + V        + +F  +V EA  +PD   +
Sbjct: 171 ADSDSLSARKLFDEMSER-DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 229

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
            ++L +C  +      +S+H F I+ GF+  +V+V +++ID Y+K  D+  A   FD++ 
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS--------- 662
             N ++ +N+++  + H+    EA+E+F  M    ++  + T VS++  C          
Sbjct: 290 CRN-IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 348

Query: 663 --HKGLVDKG-----------------CLLFKSMDSQYGMQPSPDCYGC--LVDMLSRNG 701
             H  ++ +G                 C L     +        D   C  ++  L+  G
Sbjct: 349 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG 408

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
             ++A  +   M   P+     SLL+ C +  +    +WA
Sbjct: 409 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 14/207 (6%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           I L  + S+S +L++       HG  ++     NDI +  +++  Y+KCG      R FD
Sbjct: 430 ISLLNACSVSADLRT---SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFD 486

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           ++ E+N++SWT+I+SA   NG  D  L ++ +MK  G+ PN     + +  C   G  + 
Sbjct: 487 QITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKK 546

Query: 164 GYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSISSD---DVGCWNAMI 218
           G  I  F   +  +  P +     +++  ++ G++  A  +  ++  D       W A++
Sbjct: 547 GLMI--FKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 604

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMD 245
            G   C   F+ L + S ++ E + ++
Sbjct: 605 SG---CRNRFKKLIITSEVVAEVLELE 628


>gi|302754104|ref|XP_002960476.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
 gi|300171415|gb|EFJ38015.1| hypothetical protein SELMODRAFT_70138 [Selaginella moellendorffii]
          Length = 672

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 182/675 (26%), Positives = 318/675 (47%), Gaps = 11/675 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  + K G+  + +L N L+ MY KCG        F  + ERNL +WT+ ++A  Q
Sbjct: 4   GKTIHEQMSKDGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTAFAQ 63

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+    + ++  M  +G   +  A  + +  C S+G    G S+H        + +  +
Sbjct: 64  NGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDAVL 123

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++N YAK G+ A AE +F  +   +   + A+I  Y+    G EAL +  +M  EG+
Sbjct: 124 RVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHLEGV 183

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK   ++AL  C+   D   GR IH  I     +   ++ +AL+ MY +   ++ A  
Sbjct: 184 APDKVAMLSALGACASEPD---GRAIHACITCCGSDGDDTVASALVSMYGRFQMLESAKS 240

Query: 303 VF--ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           VF   R+    V  WN++   + ++ +  +   LF K  L G  P+ VT   +L  C  L
Sbjct: 241 VFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVL 300

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNE 418
             LD    +    L      +  V  SL+ ++  C ++E A +VF   +   ++   WN 
Sbjct: 301 RKLDKARMIHA-QLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCVAWNT 359

Query: 419 LLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           +++ Y   C D  + LK F  +   GVE    T+  V+              +H  I   
Sbjct: 360 MIAAYA-ECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSC 418

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G     ++ +SL++ Y + G+L ++    +  ER D  SW  +M      G    A+ +F
Sbjct: 419 GLDELPFVSNSLMQFYGSCGRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDTALAVF 478

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           H +   G + +   L  ++ +C   G     KSIH  V+ +G      V SA++  Y K 
Sbjct: 479 HGMELEGVRANVITLTNVVTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMYGKF 538

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  A   F+   ++ + + +N L+  +A  G   E +++   M+L  ++   AT++ V
Sbjct: 539 GMLDRAVSCFND-ISAKNTVSWNALMTGFAQQGQSVETVQLSRAMQLQGMESDGATYLVV 597

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + ACSH GLV++    F ++     +  + + YGCL+D+L+R G+L+ A+ +   MPF+P
Sbjct: 598 LFACSHGGLVEEALSCFSNLVEDGSVSVNDEHYGCLIDLLARAGWLDRAEDLFRSMPFEP 657

Query: 718 SPTVYRSLLSGCRIH 732
             T + SL+  C++H
Sbjct: 658 DSTSWMSLVGACKLH 672



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/598 (26%), Positives = 265/598 (44%), Gaps = 21/598 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A ++    +L     G  +H  I    F +D  L+ +LI MY+K G F     +F
Sbjct: 85  DRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDAVLRVSLINMYAKAGEFALAEDLF 144

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMG---LKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             +  +N V++T +++A  Q   F MG   L +Y  M   G  P++ A+ S +  C S  
Sbjct: 145 QRLKPKNAVAYTALIAAYSQ---FKMGREALGLYRAMHLEGVAPDKVAMLSALGACAS-- 199

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISSDDVGCWNAM 217
               G +IH        + +  V  ++++ Y +   + +A+ VF+   +    V  WN+M
Sbjct: 200 -EPDGRAIHACITCCGSDGDDTVASALVSMYGRFQMLESAKSVFFHRRVPRSSVELWNSM 258

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  Y   G+  EAL +   M  EG+  D  T +  L  CS++   D  R IH  + R+ V
Sbjct: 259 ISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCSVLRKLDKARMIHAQL-RARV 317

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLF 335
           +   ++V++L+++Y +   ++ A  VF   A   +D ++WNT+   ++E  +PG    LF
Sbjct: 318 DADTAVVDSLLNVYRECRSLEDAVTVFREEAGGARDCVAWNTMIAAYAECGDPGMALKLF 377

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
               L G  P  VT+  +L     L  L  G  L      CG  +   V++SL+  +  C
Sbjct: 378 TLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIRSCGLDELPFVSNSLMQFYGSC 437

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           G +  A +VF ++  ++  +WN ++  Y    CCD   L  F  +   GV  N  T   V
Sbjct: 438 GRLSSATAVFHSLERRDEVSWNTIMGLYTQHGCCDT-ALAVFHGMELEGVRANVITLTNV 496

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           V  C  + +  +   IH  ++  G      + S+L+  Y  FG LD +    N     + 
Sbjct: 497 VTACTVTGDAAIGKSIHARVLSMGLEHHSAVGSALVAMYGKFGMLDRAVSCFNDISAKNT 556

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW A+M+    QG + E V +  ++   G + D      +L +C+  G  +   S    
Sbjct: 557 VSWNALMTGFAQQGQSVETVQLSRAMQLQGMESDGATYLVVLFACSHGGLVEEALSCFSN 616

Query: 575 VIKLG---FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           +++ G    N E Y    +ID  A+ G +  A   F       D   + +L+ A   H
Sbjct: 617 LVEDGSVSVNDEHY--GCLIDLLARAGWLDRAEDLFRSMPFEPDSTSWMSLVGACKLH 672



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/550 (24%), Positives = 243/550 (44%), Gaps = 12/550 (2%)

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G +IH    K    +  ++G  +++ Y K G +  AE  F++I   ++  W   +  +
Sbjct: 2   EQGKTIHEQMSKDGYARETYLGNLLVDMYGKCGSLRDAEAAFHTIRERNLFTWTIAMTAF 61

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A  G   +A+++  +M  +G+ +D+  F  A+  CS + D   GR +H  I  S  +   
Sbjct: 62  AQNGDPRQAIHLFQAMCLDGVELDRVAFATAVGACSSLGDLHTGRSLHSTIATSSFQSDA 121

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +  +LI+MY K+     A  +F+R+  K+ +++  L   +S+ K   +   L+    L 
Sbjct: 122 VLRVSLINMYAKAGEFALAEDLFQRLKPKNAVAYTALIAAYSQFKMGREALGLYRAMHLE 181

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+ V     L  C    D   G  +      CG   ++ V S+L+ M+ R   +E A
Sbjct: 182 GVAPDKVAMLSALGACASEPD---GRAIHACITCCGSDGDDTVASALVSMYGRFQMLESA 238

Query: 402 HSVF--DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            SVF    V   ++  WN ++S Y  +    + L+ F  +   GV  +  T   ++  C 
Sbjct: 239 KSVFFHRRVPRSSVELWNSMISAYVQSGHHREALELFEKMELEGVAPDVVTIVEILGVCS 298

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMAS 516
                     IH A ++    +   +  SL+  Y     L+++   F    G  R D  +
Sbjct: 299 VLRKLDKARMIH-AQLRARVDADTAVVDSLLNVYRECRSLEDAVTVFREEAGGAR-DCVA 356

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W  M++A    G    A+ +F  +   G +P E     +L + +++GA  R  S+H  + 
Sbjct: 357 WNTMIAAYAECGDPGMALKLFTLMDLHGVEPTEVTYVAVLGAASSLGALTRGASLHHRIR 416

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
             G +   +V+++++  Y  CG +  A   F  S    D + +NT++  Y  HG    A+
Sbjct: 417 SCGLDELPFVSNSLMQFYGSCGRLSSATAVF-HSLERRDEVSWNTIMGLYTQHGCCDTAL 475

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M+L  ++ +  T  +V++AC+  G    G  +   + S  G++        LV M
Sbjct: 476 AVFHGMELEGVRANVITLTNVVTACTVTGDAAIGKSIHARVLSM-GLEHHSAVGSALVAM 534

Query: 697 LSRNGYLEDA 706
             + G L+ A
Sbjct: 535 YGKFGMLDRA 544


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 294/571 (51%), Gaps = 8/571 (1%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AAA RVF  +   D   WNA++   A  G   EA  ++ +M  +G+  + +   +AL+ 
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            ++     IG Q+  L ++S +  ++   +AL+D+Y K   +  A +VF+ M +++ +SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L  G++E+ +      LF +    G  P+  TF+ LL    +     L  QL    + 
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVK 221

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLK 434
            G      V ++ I  + +CG+++ +  +FD +   +++ +WN +L  Y  N  D + +K
Sbjct: 222 YGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMK 281

Query: 435 TFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKS 492
            F  +  ESGV  +  +F  ++ +C    +    G+ IHG +IK+       +C++LI  
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341

Query: 493 YVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           Y  + +   ++++++  N     D  SW +M++     G + +A+  F  +     + DE
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           Y     L S + +   Q  K IH  VI  GF +  +V+S++I  Y+K G I  AR +F++
Sbjct: 402 YAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE 461

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +  S+ V  +N +I  YA HG       +F++M          TFV ++++CSH GLVD+
Sbjct: 462 ADKSSSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDE 520

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +  +M+++YG+    + Y C VD+  R G L+ AK +I+ MPF+P   V+ +LL  C
Sbjct: 521 GSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGAC 580

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHGN EL    +  L +  P+  + +VLLS
Sbjct: 581 RIHGNVELASDVASHLFVAEPRQHSTYVLLS 611



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 157/616 (25%), Positives = 275/616 (44%), Gaps = 14/616 (2%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL--RVFDEMAERNLVSWTLIVS 118
           V   + H  ++K G        N L+  YS+    G     RVFDE+  R+ VSW  +++
Sbjct: 8   VAAARSHASLLKSGVAAPTPW-NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLA 66

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A   +G      ++   M   G   N FA+GS ++          G  +   ALK  +  
Sbjct: 67  AQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLAN 126

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N F   ++L+ YAK G V  A +VF  +   +   WNA+I GY   G    AL +   M 
Sbjct: 127 NVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEME 186

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            EG+  D+ TF + L      + F +  Q+HG I++      ++++NA I  Y +   + 
Sbjct: 187 REGLAPDEATFASLLTAVEGPSCF-LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLK 245

Query: 299 YAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQ 356
            + ++F+ + D +D+ISWN + G ++ N    +    F + +  SG  P+  +F+ ++  
Sbjct: 246 DSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISS 305

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKN 412
           C +   D   G  +  L +         V ++LI M+ R      +E A+  F+++  K+
Sbjct: 306 CSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKD 365

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             +WN +L+GY  +   AD LK F  +    V  +   F   + +       Q+  QIHG
Sbjct: 366 TVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHG 425

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            +I +GF+S  ++ SSLI  Y   G +D++ +    A++     W AM+      G    
Sbjct: 426 LVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAEN 485

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVI 591
              +F+ +++     D      ++ SC+  G       I +    K G    +   +  +
Sbjct: 486 VDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGV 545

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y + G +  A+   D      D +V+ TL+ A   HG V  A ++   + +A  +P Q
Sbjct: 546 DLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVA--EPRQ 603

Query: 652 -ATFVSVMSACSHKGL 666
            +T+V + S  S  G+
Sbjct: 604 HSTYVLLSSMYSGLGM 619



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/511 (27%), Positives = 241/511 (47%), Gaps = 34/511 (6%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHG 68
           L A + +   H    R+ R        S++F       L  +L  +   +   +G Q+  
Sbjct: 64  LLAAQAASGAHPEAWRLLRAMHAQGLASNTFA------LGSALRSAAVARRPAIGAQLQS 117

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
             +K G  N++F  + L+ +Y+KCG      +VFD M ERN VSW  +++   ++G+   
Sbjct: 118 LALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMAS 177

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L+++++M+  G  P+E    S++      G S F   +H    KI ++    +G +VLN
Sbjct: 178 ALELFLEMEREGLAPDEATFASLLTAV--EGPSCF--LMHQLHGKI-VKYGSALGLTVLN 232

Query: 189 ----FYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GI 242
                Y++ G +  + R+F  I    D+  WNAM+G Y H G   EA+     M+ E G+
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292

Query: 243 TMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG---MD 298
             D Y+F + +  CS    D   GR IHGL+I+S +E    + NALI MY + +    M+
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A+K F  +  KD +SWN++  G+S++         F        R +   FS  LR   
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +L  L LG Q+  L +H GF   + V+SSLI+M+ + G ++ A   F+     +   WN 
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---H 471
           ++ GY  +    +V   F  + +    ++  TF  ++ +C  +    E  +++  +   +
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G  ++    +CG      +  Y   GQLD +
Sbjct: 533 GVPLRMEHYACG------VDLYGRAGQLDKA 557


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  282 bits (721), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 170/570 (29%), Positives = 290/570 (50%), Gaps = 44/570 (7%)

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI-VNALIDMYIKSSGMDYAFKVFE 305
           +T  +AL   + +      +Q+H  I+RS+++ S S+ V  +I     SS +DYA  VF 
Sbjct: 24  HTLFSALSSATSLTHL---KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN 80

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +   +    N      S ++ P +T  ++ +    G   +  +F  LL+   ++  L  
Sbjct: 81  LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           GL++  LA   GF  +  V + L+ M+  CG +  A  +FD + ++++ TW+ ++ GYC 
Sbjct: 141 GLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQ 200

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK--------- 476
           +    D L  F  +    VE +      V+  C R+ N      IH  I++         
Sbjct: 201 SGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHL 260

Query: 477 -----TGFSSCGYI-----------------CSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
                T ++SCG +                  ++++  Y   GQ++N+    N   + D+
Sbjct: 261 QSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL 320

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
             W AM+S         EA+ +F+ +   G KPD+  + +++ +CA +GA  + K IH F
Sbjct: 321 VCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLF 380

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           V K GF   + + +A+I+ YAKCG ++ AR  FD+    N VI +  +I A+A HG    
Sbjct: 381 VDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKN-VISWTCMISAFAMHGDAGS 439

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+  F +M+  N++P+  TFV V+ ACSH GLV++G  +F SM +++ + P    YGC+V
Sbjct: 440 ALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMV 499

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+  R   L +A  ++E MP  P+  ++ SL++ CR+HG  ELGE+A+++LL L P +D 
Sbjct: 500 DLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDG 559

Query: 755 AHVLLSK---RKRQREG-----NLLDHEGV 776
           AHV LS    + R+ E       L+ H+G+
Sbjct: 560 AHVFLSNIYAKARRWEDVGQVRKLMKHKGI 589



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 194/414 (46%), Gaps = 46/414 (11%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L K+LS    +KS V G ++HG   KLGF +D F+Q  L+ MY+ CG       +FD+M 
Sbjct: 128 LLKALS---RVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMF 184

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R++V+W++++    Q+G F+  L ++ +MK     P+E  + +V+  C   G   +G  
Sbjct: 185 HRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYA-------------------------------KLGD 195
           IH F ++  I  +P +  +++  YA                               KLG 
Sbjct: 245 IHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQ 304

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +  A  VF  +   D+ CW+AMI GYA      EALN+ + M   GI  D+ T ++ +  
Sbjct: 305 IENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITA 364

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+ +   D  + IH  + ++    ++ I NALI+MY K   ++ A ++F++M  K+VISW
Sbjct: 365 CAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
             +   F+ + + G     FH+       PN +TF  +L  C        GL  +   + 
Sbjct: 425 TCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSH-----AGLVEEGRKIF 479

Query: 376 CGFLDEENVTSS------LIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
              ++E N+T        ++ +F R   +  A  + + +    N+  W  L++ 
Sbjct: 480 YSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAA 533



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/428 (23%), Positives = 180/428 (42%), Gaps = 36/428 (8%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAERNLVSWTLIVSAAI 121
           QVH  I++        L   L+   S C       + L VF+ + +         +    
Sbjct: 41  QVHAQILRSKLDRSTSLLVKLV--ISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELS 98

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++ E +  L +Y  M+T G   + F+   ++K    + +   G  IH  A K+  + +PF
Sbjct: 99  RSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPF 158

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   ++  YA  G +A A  +F  +   DV  W+ MI GY   G   +AL +   M    
Sbjct: 159 VQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYN 218

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+      L  C    +   G+ IH  I+ + +     + +AL+ MY     MD A 
Sbjct: 219 VEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLAL 278

Query: 302 KVFERMA-------------------------------DKDVISWNTLFGGFSENKNPGQ 330
            +FE+M                                 KD++ W+ +  G++E+ +P +
Sbjct: 279 NLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQE 338

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             +LF++    G +P+ VT   ++  C  L  LD    +       GF     + ++LI 
Sbjct: 339 ALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIE 398

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG++E A  +FD +  KN+ +W  ++S +  +      L+ F  + +  +E NG T
Sbjct: 399 MYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGIT 458

Query: 451 FFYVVETC 458
           F  V+  C
Sbjct: 459 FVGVLYAC 466



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 134/320 (41%), Gaps = 43/320 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D + L+  LS      +   G  +H  I++     D  LQ+ L+ MY+ CG     L
Sbjct: 219 VEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLAL 278

Query: 100 RVFDEMAERNLVS-------------------------------WTLIVSAAIQNGEFDM 128
            +F++M  +NLV+                               W+ ++S   ++     
Sbjct: 279 NLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQE 338

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC---- 184
            L ++ +M++ G  P++  + SV+  C  +GA +    IH F     ++KN F G     
Sbjct: 339 ALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLF-----VDKNGFGGALPIN 393

Query: 185 -SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  YAK G +  A R+F  +   +V  W  MI  +A  G    AL     M  E I 
Sbjct: 394 NALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIE 453

Query: 244 MDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +  TF+  L  CS     + GR+I + +I    +         ++D++ +++ +  A +
Sbjct: 454 PNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALE 513

Query: 303 VFERMA-DKDVISWNTLFGG 321
           + E M    +VI W +L   
Sbjct: 514 LVEAMPLAPNVIIWGSLMAA 533


>gi|225459473|ref|XP_002284396.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Vitis vinifera]
          Length = 690

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 177/651 (27%), Positives = 310/651 (47%), Gaps = 44/651 (6%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV++ C    A   G S+H   +K+ +  + F   ++L  Y  +  +  A R+F      
Sbjct: 8   SVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLER 67

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQI 268
           +V  W  MI  Y+  G    AL     ML  +  T + + +   L+ C LV D + G+ I
Sbjct: 68  NVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLI 127

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE----------------------- 305
           HG + R+ +     ++N L+DMY+K   +  A KVF+                       
Sbjct: 128 HGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLM 187

Query: 306 --------RMADKDVISWNTLFGGFSENKNPG--QTASLFHKFILSGSRPNHVTFSILLR 355
                   +M + D +SWN++  GF   ++ G  +   + H+    G + +  TFS  L+
Sbjct: 188 EEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHR---KGLKLDGFTFSCALK 244

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS------ 409
            CG    L +  Q+ C     GF       S+L+  +  C  ++ A  +FD  S      
Sbjct: 245 TCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASI 304

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
              +  WN +LSGY  N  ++  +     I   G  V+  TF   ++ C   +N ++  Q
Sbjct: 305 LDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQ 364

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           + G  + +G+     + S LI  Y N G++ ++          D+  W +++S     G 
Sbjct: 365 VQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGL 424

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           N    ++F  +V    + D++I+ ++L +C+++      K +H F +K G+ +E    ++
Sbjct: 425 NSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTS 484

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCG+I+   +A     +  D + Y  +IM    +G   EA+  F +M    L+P
Sbjct: 485 LIDLYAKCGEIEDG-LALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKP 543

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           ++ TF+ V+SAC H GLV++   +FK M ++Y M+P  + Y C+V++LS+ G  ++A+ +
Sbjct: 544 NEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEEL 603

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  MPF+P  T++ SLL  C  H   EL  + +E+LL  LP++ +  V LS
Sbjct: 604 IAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERLLTTLPEDPSILVTLS 654



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 156/606 (25%), Positives = 268/606 (44%), Gaps = 40/606 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H HI+KLG  ND+F  NNL+AMY          R+FDE  ERN+ +WT ++SA   
Sbjct: 22  GRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYSS 81

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G  D  LK YV M ++    PN F   +V+K C  +G  E G  IH    +  +  +  
Sbjct: 82  SGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFDTV 141

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV-------- 233
           +  ++L+ Y K G +++A +VF  I       WN MI GY   G   EA+N+        
Sbjct: 142 LMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQMPEPD 201

Query: 234 ----------------------VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
                                 V  M  +G+ +D +TF  AL+ C       + +QIH  
Sbjct: 202 TVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFSCALKTCGCFQLLVMVKQIHCY 261

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVIS----WNTLFGGFSEN 325
           + +S         +AL+D Y   + +D A K+F+  +     ++     WN++  G+  N
Sbjct: 262 VNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWNSMLSGYVVN 321

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
           +      +L  +    G+  +  TF   L+ C  L +  LGLQ+Q LA+  G+  +  V 
Sbjct: 322 EQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVG 381

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           S LI ++   G ++ A  +F  +  K+I  W+ L+S       ++ V   F ++    +E
Sbjct: 382 SILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIE 441

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           V+      V++ C          Q+H   +K+G+ S     +SLI  Y   G++++    
Sbjct: 442 VDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLAL 501

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
                  D   +  ++      G   EAV  F  ++E G KP+E     +L++C   G  
Sbjct: 502 FYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLV 561

Query: 566 QRTKSIHPFVIKLGFNTEVYVAS--AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           +   +I  + +K  +  E ++     +++  ++ G  K A     +     D  ++N+L+
Sbjct: 562 EEAWTIFKY-MKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLL 620

Query: 624 MAYAHH 629
            A   H
Sbjct: 621 GACGTH 626



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/528 (24%), Positives = 233/528 (44%), Gaps = 40/528 (7%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           MD +  ++ ++ C     F  GR +H  II+  V   +   N L+ MY+  S +  A ++
Sbjct: 1   MDLHRIVSVIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRL 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLD 362
           F+   +++V +W T+   +S +  P      + + + S S  PN   +S +L+ CG + D
Sbjct: 61  FDETLERNVATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGD 120

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G  +           +  + ++L+ M+ +CG++  A  VFD++   + T+WN ++SG
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISG 180

Query: 423 Y-----------------------------CFNCCDA-DVLKTFCNIWESGVEVNGCTFF 452
           Y                              F C ++   L+  C +   G++++G TF 
Sbjct: 181 YGKEGLMEEAVNLFYQMPEPDTVSWNSIIAGFGCKESLGALRFVCMMHRKGLKLDGFTFS 240

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN----- 507
             ++TC   +   MV QIH  + K+GF SC +  S+L+ SY N  +LD + +  +     
Sbjct: 241 CALKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCC 300

Query: 508 GAERLD-MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
            A  LD +  W +M+S  V    N  A+ +   +   G   D +  G+ L  C  +  ++
Sbjct: 301 SASILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFR 360

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
               +    +  G+  +  V S +ID YA  G IK A   F +     D++V+++LI   
Sbjct: 361 LGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYR-LPEKDIVVWSSLISWC 419

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
              GL S    +F  M   +++  Q    SV+ ACS    +  G  +  S   + G +  
Sbjct: 420 TKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQV-HSFCVKSGYESE 478

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
                 L+D+ ++ G +ED   +      +     Y  ++ GC  +G 
Sbjct: 479 RITVTSLIDLYAKCGEIEDGLALFYCTS-ERDTVCYTGIIMGCGQNGR 525



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 128/563 (22%), Positives = 223/563 (39%), Gaps = 55/563 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD------------------- 103
           G  +HG + +     D  L N L+ MY KCG      +VFD                   
Sbjct: 124 GKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGK 183

Query: 104 ------------EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
                       +M E + VSW  I+ A     E    L+    M   G   + F     
Sbjct: 184 EGLMEEAVNLFYQMPEPDTVSWNSII-AGFGCKESLGALRFVCMMHRKGLKLDGFTFSCA 242

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISS- 208
           +K C           IHC+  K       F   ++++ Y+   ++  A ++F  YS  S 
Sbjct: 243 LKTCGCFQLLVMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSA 302

Query: 209 ---DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
              D +  WN+M+ GY        A+N+VS +   G  +D +TF +AL+ C  + +F +G
Sbjct: 303 SILDCLPLWNSMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLG 362

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            Q+ GL + S  E    + + LID+Y     +  A ++F R+ +KD++ W++L    ++ 
Sbjct: 363 LQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKM 422

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                  SLF   +      +    S +L+ C  L+ L  G Q+    +  G+  E    
Sbjct: 423 GLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITV 482

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           +SLI ++ +CG +E   ++F   S ++   +  ++ G   N    + +  F  + E G++
Sbjct: 483 TSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLK 542

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            N  TF  V+  C      +  G +  A     +    Y     I+ Y    +L +    
Sbjct: 543 PNEITFLGVLSAC------RHAGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGC 596

Query: 506 SNGAERL--------DMASWGAMMSAL-VHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
              AE L        D   W +++ A   H+    E V      +      D  IL T+ 
Sbjct: 597 FKEAEELIAEMPFEPDQTIWNSLLGACGTHK--KTELVNFIAERLLTTLPEDPSILVTLS 654

Query: 557 NSCAAIGAYQRTKSIHPFVIKLG 579
           N  A +  +  ++ +   + K+G
Sbjct: 655 NVYATLEMWDDSRKMREVIKKVG 677



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 139/303 (45%), Gaps = 6/303 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN------LVSWT 114
           V+  Q+H ++ K GF +  F  + L+  YS C      +++FDE +  +      L  W 
Sbjct: 253 VMVKQIHCYVNKSGFGSCCFTASALVDSYSNCNELDEAIKMFDEYSCCSASILDCLPLWN 312

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            ++S  + N +    + +   + + G   + F  GS +KVC+++     G  +   A+  
Sbjct: 313 SMLSGYVVNEQNSAAINLVSQIHSLGAHVDSFTFGSALKVCINLQNFRLGLQVQGLAVTS 372

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +  VG  +++ YA  G +  A R+FY +   D+  W+++I      G      ++ 
Sbjct: 373 GYELDYVVGSILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLF 432

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M+   I +D++   + L+ CS +     G+Q+H   ++S  E     V +LID+Y K 
Sbjct: 433 RDMVNLDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKC 492

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             ++    +F   +++D + +  +  G  +N    +    F + I  G +PN +TF  +L
Sbjct: 493 GEIEDGLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVL 552

Query: 355 RQC 357
             C
Sbjct: 553 SAC 555



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 2/287 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D      +L +  NL++  LG QV G  V  G+  D  + + LI +Y+  G     LR+F
Sbjct: 342 DSFTFGSALKVCINLQNFRLGLQVQGLAVTSGYELDYVVGSILIDLYANDGKIKDALRLF 401

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + E+++V W+ ++S   + G   +   ++ DM       ++F + SV+K C S+    
Sbjct: 402 YRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVGLG 461

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H F +K   E       S+++ YAK G++     +FY  S  D  C+  +I G  
Sbjct: 462 SGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMGCG 521

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSI 281
             G   EA+     M+  G+  ++ TF+  L  C      +    I   +    ++E  I
Sbjct: 522 QNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEPHI 581

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
                ++++  ++     A ++   M  + D   WN+L G    +K 
Sbjct: 582 EHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTHKK 628


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  281 bits (720), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 174/596 (29%), Positives = 294/596 (49%), Gaps = 26/596 (4%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           HC A+K     + +   ++++ YAK G++  A ++F   S  D   WN MI G  + G  
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             AL  + SM   G  +D Y+F + L+G + V   ++G+Q+H +I++   E ++   +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSAL 141

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K   ++ AF+VF+ +  ++ ++WN L  G++   + G    L     L G   + 
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDD 201

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            TF+ LL          L  Q+    +  G   +  V +++I  +  CG++E A  VFD 
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 408 -VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +  +++ TWN +L+ Y  N  + +  + F  +   G E +  T+  V+       +Q  
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQ 321

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
              +HG +IK G      I +SLI  Y+  +   +D +       E  D  SW ++++  
Sbjct: 322 GKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGF 381

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G + +A+  F ++       D Y    +L SC+ +   Q  + +H            
Sbjct: 382 SQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL---------- 431

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
                       CG I+ AR +FD +   +  I +N+LI  YA HG    A+++F  MK 
Sbjct: 432 ------------CGVIEDARKSFDAT-PKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD 478

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             ++    TFV+V++ACSH GLV++G    KSM+S YG+ P  + Y C++D+L R G L+
Sbjct: 479 RRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLD 538

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +AK +IE MPF+P   V+++LL  CR  G+ EL    +  LL L P+    +VLLS
Sbjct: 539 EAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLS 594



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 271/598 (45%), Gaps = 29/598 (4%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGL 130
           +K G T  I+  NN+I+ Y+KCG      ++FDE ++R+ VSW  +++  +  G F+  L
Sbjct: 26  IKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETAL 85

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           +    MK  GF  + ++ GS++K    +G  E G  +H   +KI  E N F G ++L+ Y
Sbjct: 86  EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMY 145

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK   V  A  VF SI+  +   WNA+I GYAH G    A  ++  M  EG+ +D  TF 
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFA 205

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE-RMAD 309
             L          +  Q+H  I++  +    ++ NA+I  Y +   ++ A +VF+  +  
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +D+++WN++   +  N    +   LF +  + G  P+  T++ ++    +      G  L
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSL 325

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEM--AHSVFDNVSYKNITTWNELLSGYCFNC 427
             L +  G      +++SLI M+ +  +  M  A ++F+++  K+  +WN +L+G+  + 
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              D LK F N+    V ++   F  V+ +C      Q+  Q+H             +C 
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH------------VLC- 432

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
                    G ++++ +  +   +    +W +++      G    A+ +F  + +   K 
Sbjct: 433 ---------GVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 483

Query: 548 DEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           D      +L +C+ IG  +   S +       G    +   + +ID   + G +  A+  
Sbjct: 484 DHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKAL 543

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSH 663
            +      D +V+ TL+ A    G +  A ++     L  L+P +  T+V + S   H
Sbjct: 544 IEAMPFEPDAMVWKTLLGACRTCGDIELASQV--ASHLLELEPEEHCTYVLLSSMFGH 599



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/521 (24%), Positives = 214/521 (41%), Gaps = 60/521 (11%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVH  IVK+G+  ++F  + L+ MY+KC        VF  +  RN V+W  ++S   
Sbjct: 118 VGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G+      +   M+  G   ++     ++ +       +    +H   +K  +  +  
Sbjct: 178 HVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTT 237

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  +++  Y++ G +  AERVF  +I + D+  WN+M+  Y       EA  +   M   
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVL 297

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK--SSGMD 298
           G   D YT+ + +      A    G+ +HGL+I+  +E  + I N+LI MY+K  S  MD
Sbjct: 298 GFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMD 357

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  +FE + +KD +SWN++  GFS++         F          +H  FS +LR C 
Sbjct: 358 EALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS 417

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L LG Q+  L                      CG +E A   FD     +   WN 
Sbjct: 418 DLATLQLGQQVHVL----------------------CGVIEDARKSFDATPKDSSIAWNS 455

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           L+ GY  +      L  F  + +  V+++  TF  V+  C            H  +++ G
Sbjct: 456 LIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACS-----------HIGLVEEG 504

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           +S                     S E   G     M  +  M+  L   G   EA     
Sbjct: 505 WS------------------FLKSMESDYGIPP-RMEHYACMIDLLGRAGRLDEA----K 541

Query: 539 SLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +L+EA   +PD  +  T+L +C   G  +    +   +++L
Sbjct: 542 ALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLEL 582



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 3/183 (1%)

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           S ++  A  R    H   IK G    +Y A+ +I  YAKCG+I+ A   FD++ +  D +
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDET-SQRDAV 66

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +NT+I    + G    A+E    MK         +F S++   +  G V+ G  +  SM
Sbjct: 67  SWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQV-HSM 125

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
             + G + +      L+DM ++   +EDA  V + +  + S T + +L+SG    G++  
Sbjct: 126 IVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALISGYAHVGDRGT 184

Query: 738 GEW 740
             W
Sbjct: 185 AFW 187


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 294/571 (51%), Gaps = 8/571 (1%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AAA RVF  +   D   WNA++   A  G   EA  ++ +M  +G+  + +   +AL+ 
Sbjct: 43  LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            ++     IG Q+  L ++S +  ++   +AL+D+Y K   +  A +VF+ M +++ +SW
Sbjct: 103 AAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSW 162

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L  G++E+ +      LF +    G  P+  TF+ LL    +     L  QL    + 
Sbjct: 163 NALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVK 221

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLK 434
            G      V ++ I  + +CG+++ +  +FD +   +++ +WN +L  Y  N  D + +K
Sbjct: 222 YGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMK 281

Query: 435 TFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKS 492
            F  +  ESGV  +  +F  ++ +C    +    G+ IHG +IK+       +C++LI  
Sbjct: 282 FFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAM 341

Query: 493 YVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           Y  + +   ++++++  N     D  SW +M++     G + +A+  F  +     + DE
Sbjct: 342 YTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDE 401

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           Y     L S + +   Q  K IH  VI  GF +  +V+S++I  Y+K G I  AR +F++
Sbjct: 402 YAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEE 461

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +  S+ V  +N +I  YA HG       +F++M          TFV ++++CSH GLVD+
Sbjct: 462 ADKSSSV-PWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDE 520

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +  +M+++YG+    + Y C VD+  R G L+ AK +I+ MPF+P   V+ +LL  C
Sbjct: 521 GSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGAC 580

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHGN EL    +  L +  P+  + +VLLS
Sbjct: 581 RIHGNVELASDVASHLFVAEPRQHSTYVLLS 611



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/594 (25%), Positives = 268/594 (45%), Gaps = 13/594 (2%)

Query: 83  NNLIAMYSKCGYFGWGL--RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           N L+  YS+    G     RVFDE+  R+ VSW  +++A   +G      ++   M   G
Sbjct: 29  NQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQG 88

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
              N FA+GS ++          G  +   ALK  +  N F   ++L+ YAK G V  A 
Sbjct: 89  LASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDAR 148

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF  +   +   WNA+I GY   G    AL +   M  EG+  D+ TF + L      +
Sbjct: 149 QVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPS 208

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLF 319
            F +  Q+HG I++      ++++NA I  Y +   +  + ++F+ + D +D+ISWN + 
Sbjct: 209 CF-LMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAML 267

Query: 320 GGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKL-LDLDLGLQLQCLALHCG 377
           G ++ N    +    F + +  SG  P+  +F+ ++  C +   D   G  +  L +   
Sbjct: 268 GAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSA 327

Query: 378 FLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
                 V ++LI M+ R      +E A+  F+++  K+  +WN +L+GY  +   AD LK
Sbjct: 328 LEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALK 387

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  +    V  +   F   + +       Q+  QIHG +I +GF+S  ++ SSLI  Y 
Sbjct: 388 FFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYS 447

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G +D++ +    A++     W AM+      G       +F+ +++     D      
Sbjct: 448 KSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVG 507

Query: 555 ILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++ SC+  G       I +    K G    +   +  +D Y + G +  A+   D     
Sbjct: 508 LITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFE 567

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGL 666
            D +V+ TL+ A   HG V  A ++   + +A  +P Q +T+V + S  S  G+
Sbjct: 568 PDAMVWMTLLGACRIHGNVELASDVASHLFVA--EPRQHSTYVLLSSMYSGLGM 619



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 272/592 (45%), Gaps = 38/592 (6%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHG 68
           L A + +   H    R+ R        S++F       L  +L  +   +   +G Q+  
Sbjct: 64  LLAAQAASGAHPEAWRLLRAMHAQGLASNTFA------LGSALRSAAVARRPAIGAQLQS 117

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
             +K G  N++F  + L+ +Y+KCG      +VFD M ERN VSW  +++   ++G+   
Sbjct: 118 LALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMAS 177

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L+++++M+  G  P+E    S++      G S F   +H    KI ++    +G +VLN
Sbjct: 178 ALELFLEMEREGLAPDEATFASLLTAV--EGPSCF--LMHQLHGKI-VKYGSALGLTVLN 232

Query: 189 ----FYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GI 242
                Y++ G +  + R+F  I    D+  WNAM+G Y H G   EA+     M+ E G+
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292

Query: 243 TMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG---MD 298
             D Y+F + +  CS    D   GR IHGL+I+S +E    + NALI MY + +    M+
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A+K F  +  KD +SWN++  G+S++         F        R +   FS  LR   
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +L  L LG Q+  L +H GF   + V+SSLI+M+ + G ++ A   F+     +   WN 
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---H 471
           ++ GY  +    +V   F  + +    ++  TF  ++ +C  +    E  +++  +   +
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHN 530
           G  ++    +CG      +  Y   GQLD + +  +      D   W  ++ A    G+ 
Sbjct: 533 GVPLRMEHYACG------VDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNV 586

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSC-AAIGAYQRTKSIHPFVIKLGFN 581
             A  +   L  A  +P ++    +L+S  + +G +    ++   + K G +
Sbjct: 587 ELASDVASHLFVA--EPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLS 636


>gi|387965715|gb|AFK13844.1| cyclin domain/pentatricopeptide repeat-containing protein [Beta
           vulgaris subsp. vulgaris]
          Length = 877

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 199/797 (24%), Positives = 370/797 (46%), Gaps = 59/797 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + L  +L     + S  +G  +H  +VKLG  + + +   L+ +Y+K   F    +
Sbjct: 40  KPDHLVLQTALKSCATISSLNVGRALHSLVVKLGHISCLSVSKGLLNVYAKGKDFDDCKK 99

Query: 101 VFDEMAERNLVSWTLIVS----AAIQNGEFDMGLKMYVDMKT---NGFMPNEFAVGSVMK 153
           +  +M + + V W +++S    + + +GE    +++  DM T       P   A+  V+ 
Sbjct: 100 LLYQMPKYDTVVWNIVLSGLSGSQVHDGEV---MRLVYDMHTCKETELSPVSIAI--VLP 154

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV-AAAERVFYSISSDDVG 212
           VC  +     G S+HC+A+K        VG S+++ YAK G V   A   F  I+  DV 
Sbjct: 155 VCARLRVLNAGRSLHCYAVKSGWASETLVGNSLVSMYAKCGLVYDGAYESFCEINDKDVI 214

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIH 269
            WNA++ G+   G+  +A      ML   +  +  T  + L  C+++   D   +G+++H
Sbjct: 215 SWNALMAGFIENGFYNDAWVFFRRMLLGPVAPNYATLTSILPVCAMLDGDDAYSLGKELH 274

Query: 270 GLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
              ++ S+++  + IVNAL+  Y++   ++ A  +F+ MA +D++SWN L GG++ N   
Sbjct: 275 AYALKHSDLQKDVFIVNALMSFYLRMGVVEGAEALFDGMASRDLVSWNVLIGGYASNNEY 334

Query: 329 GQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL-DEENVTS 386
            +   LF   + S +  P  VT   +L  C  L +L +  Q+      C  L D+  V++
Sbjct: 335 SKAVHLFQNLVSSQTLEPGSVTLISVLPACAHLQNLWMVKQIHGFISQCPTLYDDTAVSN 394

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +LI  + +C  ++ +   F   S +++ +WN LL  +    C+  +L     + E  V  
Sbjct: 395 ALISSYAKCNDLDSSFRTFIISSQRDLISWNSLLDAFAERGCELQLLNLLYQMSEERVGP 454

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKT-----------------GFSSCGYI---- 485
           +  T   +++          + + HG +++                   ++ CG +    
Sbjct: 455 DSITILTLIQFYGSISKLSKIKEAHGYLLRACLCQNDTQPTLGNALLDAYAKCGCVNYAN 514

Query: 486 -------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
                         +S I  Y+N+       +   G  +    ++  M+ A V      +
Sbjct: 515 KIYKIKLGEGKLKWNSEIPGYINWNIQAGECKALEGISQTHRTTFNLMIRAYVENNCLEQ 574

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           AV +   L   G KPD   + +IL  C  + +    +  H ++++     ++ +   +ID
Sbjct: 575 AVALLFDLQVQGAKPDAMTIMSILPICVKMASAYLLRQCHGYMVRACIE-DIQLKGTMID 633

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG +  A   F  S    D++++  LI  YA HG+  EA+ +F  M +  L+P   
Sbjct: 634 IYSKCGYLSLANKLF-WSSTHKDLVMFTALIGGYAMHGMGKEALVLFKHMLVLGLRPDHV 692

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
              +++SACSH GLVD+G   F S++  YGM+P+ + YGC+VD+L+R G ++DA   +  
Sbjct: 693 VLTAILSACSHAGLVDEGLKFFDSIERVYGMKPTMEQYGCVVDLLARRGKIKDAYTFVTE 752

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLD 772
           MP + +  ++  LL  CR +   EL +  +++LL     +  ++V +S      E     
Sbjct: 753 MPVKVNSNIWSLLLGACRTYHEVELSQIVADQLLRSEDSDIGSYVAMSNLHAAEE----K 808

Query: 773 HEGVCNVNDGIKTVDLK 789
            + V  +   +KT DLK
Sbjct: 809 WDNVLEIRKVMKTRDLK 825



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 158/680 (23%), Positives = 296/680 (43%), Gaps = 77/680 (11%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTN--GFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           W+ +++A   NG+ D  L +++    +  GF P+   + + +K C ++ +   G ++H  
Sbjct: 9   WSELINAQSINGKHDEVLNLFLSKLKHPFGFKPDHLVLQTALKSCATISSLNVGRALHSL 68

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA----HCGY 226
            +K+       V   +LN YAK  D    +++ Y +   D   WN ++ G +    H G 
Sbjct: 69  VVKLGHISCLSVSKGLLNVYAKGKDFDDCKKLLYQMPKYDTVVWNIVLSGLSGSQVHDG- 127

Query: 227 GFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
             E + +V  M   +   +   +    L  C+ +   + GR +H   ++S       + N
Sbjct: 128 --EVMRLVYDMHTCKETELSPVSIAIVLPVCARLRVLNAGRSLHCYAVKSGWASETLVGN 185

Query: 286 ALIDMYIKSSGM-DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +L+ MY K   + D A++ F  + DKDVISWN L  GF EN         F + +L    
Sbjct: 186 SLVSMYAKCGLVYDGAYESFCEINDKDVISWNALMAGFIENGFYNDAWVFFRRMLLGPVA 245

Query: 345 PNHVTFSILLRQCGKLLDLD----LGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
           PN+ T + +L  C  +LD D    LG +L   AL H     +  + ++L+  + R G VE
Sbjct: 246 PNYATLTSILPVCA-MLDGDDAYSLGKELHAYALKHSDLQKDVFIVNALMSFYLRMGVVE 304

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETC 458
            A ++FD ++ +++ +WN L+ GY  N   +  +  F N+  S  +E    T   V+  C
Sbjct: 305 GAEALFDGMASRDLVSWNVLIGGYASNNEYSKAVHLFQNLVSSQTLEPGSVTLISVLPAC 364

Query: 459 CRSENQQMVGQIHGAIIK--TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
              +N  MV QIHG I +  T +     + ++LI SY     LD+SF     + + D+ S
Sbjct: 365 AHLQNLWMVKQIHGFISQCPTLYDDTA-VSNALISSYAKCNDLDSSFRTFIISSQRDLIS 423

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +++ A   +G   + + + + + E    PD   + T++    +I    + K  H +++
Sbjct: 424 WNSLLDAFAERGCELQLLNLLYQMSEERVGPDSITILTLIQFYGSISKLSKIKEAHGYLL 483

Query: 577 KLGF---NTEVYVASAVIDAYAKCG------------------------------DIKGA 603
           +      +T+  + +A++DAYAKCG                              +I+  
Sbjct: 484 RACLCQNDTQPTLGNALLDAYAKCGCVNYANKIYKIKLGEGKLKWNSEIPGYINWNIQAG 543

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
                +  +      +N +I AY  +  + +A+ +   +++   +P   T +S++  C  
Sbjct: 544 ECKALEGISQTHRTTFNLMIRAYVENNCLEQAVALLFDLQVQGAKPDAMTIMSILPICVK 603

Query: 664 ----------KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
                      G + + C+     D Q          G ++D+ S+ GYL  A  +    
Sbjct: 604 MASAYLLRQCHGYMVRACI----EDIQLK--------GTMIDIYSKCGYLSLANKLF-WS 650

Query: 714 PFQPSPTVYRSLLSGCRIHG 733
                  ++ +L+ G  +HG
Sbjct: 651 STHKDLVMFTALIGGYAMHG 670


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 300/587 (51%), Gaps = 7/587 (1%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +P     +L  Y+  G +AAA RVF  I   D   WN+++  +   G   +A  ++ +M 
Sbjct: 25  SPTPWNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMH 83

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+    +   +AL+  +     ++G Q+    +R  +  ++   +AL+D+Y K   + 
Sbjct: 84  ARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLG 143

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A +VF+ M  ++++SWN +  G+++++ P +   LF +    GS P+  TF++LL    
Sbjct: 144 DARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIA 203

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
                 L  QL    +  G        ++ I  + +C A+  +  +FD +  +++ +WN 
Sbjct: 204 GPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNS 263

Query: 419 LLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSE-NQQMVGQIHGAIIK 476
           +L  Y ++  D + ++ F  +  ESG++ +  +F   +  C     + Q    IH  +IK
Sbjct: 264 MLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIK 323

Query: 477 TGFSSCGYICSSLIKSYVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            G      +C+++I  Y  F     +++++   +     D  SW +M++   H G + +A
Sbjct: 324 FGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDA 383

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           +  F  +     + DE+ L   L SC+ +   +  + +H  V++ GF +  +V+S++I  
Sbjct: 384 LKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFM 443

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y+KCG +  AR +F+++  S+ V  +N+++  YA HG      ++F++M    +     T
Sbjct: 444 YSKCGVLGDARKSFEEADKSSSV-PWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVT 502

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           FV++++A SH GLVD+G  +  +M+++Y +    + Y C VD+  R G L+ AK +IE M
Sbjct: 503 FVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESM 562

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PFQP   V+ +LL  CRIHGN EL    +  L +  P+  + +VLLS
Sbjct: 563 PFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLS 609



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 143/627 (22%), Positives = 277/627 (44%), Gaps = 15/627 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
             + H  ++K G ++     N L+  YS  G      RVFDE+   +  SW  +++A + 
Sbjct: 11  AAKSHATLLKSGASSPT-PWNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVA 68

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G      ++   M   G   + FA+GS ++   +    E G  +  F+++  +  N F 
Sbjct: 69  AGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFP 128

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++L+ YAK G +  A RVF  +   ++  WNA+I GY       EA+ +   M   G 
Sbjct: 129 ASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGS 188

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  TF   L   +    + + RQ+HG I++      +  +NA I  Y +   +  + K
Sbjct: 189 VPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRK 248

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKL- 360
           +F+ +  +D+ISWN++ G ++ +    +    F + +  SG +P+  +F+  +  C +  
Sbjct: 249 IFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHG 308

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG---AVEMAHSVFDNVSYKNITTWN 417
            D   G  +  L +  G      V +++I M+ R      +E A++ F ++ +K+  +WN
Sbjct: 309 CDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWN 368

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +L+GY  +   +D LK F  +    +  +       + +C      ++  Q+H  ++++
Sbjct: 369 SMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQS 428

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           GF+S  ++ SSLI  Y   G L ++ +    A++     W +MM      G       +F
Sbjct: 429 GFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLF 488

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV---IKLGFNTEVYVASAVIDAY 594
           + +++     D      ++ + +  G       I   +    K+    E Y     +D Y
Sbjct: 489 NEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACG--VDLY 546

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-AT 653
            + G +  A+   +      D IV+ TL+ A   HG +  A ++   + +A  +P Q +T
Sbjct: 547 GRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVA--EPRQHST 604

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           +V + S  S  G+      + K M ++
Sbjct: 605 YVLLSSMYSGLGMWSDRATVQKVMRNR 631



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 195/403 (48%), Gaps = 13/403 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+    V+ G  +++F  + L+ +Y+KCG  G   RVFD M  RN+VSW  I++   
Sbjct: 109 LGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYT 168

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            + +    ++++++M+  G +P+    G+   V ++  A    YS+        ++    
Sbjct: 169 DSRKPAEAMELFLEMQRVGSVPD----GTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSA 224

Query: 182 VGCSVLN----FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +G   LN     Y++   +A + ++F  I S D+  WN+M+G YA+ G   EA+     M
Sbjct: 225 LGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRM 284

Query: 238 LFE-GITMDKYTFINALQGCSLVA-DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           + E GI  D Y+F +A+  CS    D   GR IH L+I+  +E    + NA+I MY + +
Sbjct: 285 MRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFA 344

Query: 296 G---MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
               M+ A+  F  +  KD +SWN++  G+S +         F        R +    S 
Sbjct: 345 DNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSA 404

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            LR C  L  L LG Q+  L +  GF   + V+SSLI+M+ +CG +  A   F+     +
Sbjct: 405 ALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSS 464

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
              WN ++ GY  +     V   F  + +  V ++  TF  ++
Sbjct: 465 SVPWNSMMFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALI 507



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   L+ +L    +L    LG QVH  +V+ GF ++ F+ ++LI MYSKCG  G   
Sbjct: 395 IRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDAR 454

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           + F+E  + + V W  ++    Q+G+      ++ +M
Sbjct: 455 KSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEM 491


>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 205/726 (28%), Positives = 339/726 (46%), Gaps = 37/726 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   +S S ++ +   G  +HG   K G  +D FL N LI MY+KCG       VF
Sbjct: 113 DSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVF 172

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R+++SW  ++     N      L  +  M  +    +  ++   +     +G   
Sbjct: 173 GGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELS 232

Query: 163 FGYSIHCFALKI---RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           FG  IH + +K+    I  N F   S+++ Y++  D+ AAE +F  +   D+  WNAM+ 
Sbjct: 233 FGQVIHGWGIKLGYKDISHNSFEN-SLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLD 291

Query: 220 GYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G A     +EA +++  M   G +  D  T +  +  C+ +     GR +HGL +R E+ 
Sbjct: 292 GLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMG 351

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              S+ N+LIDMY K   +  A                        N +  +   LF + 
Sbjct: 352 LDFSVTNSLIDMYSKCKDVKRA----------------------EHNGHSREAQHLFRQL 389

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           + S S+ +  T   +L  C     L  G  + C  L  GF +     +SL+ M+  CG +
Sbjct: 390 LQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL 449

Query: 399 EMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVV 455
               S+   VS   +I  WN +++G   N    + LK F N+     +V  +    F V+
Sbjct: 450 VACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAF-NLMRQDPDVCHDSVALFNVI 508

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C   E     G +HG  +KT   S   + ++LI  Y   G+++N+      +   ++ 
Sbjct: 509 SACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLC 568

Query: 516 SWGAMMSALVHQGHNHEAVTIF-HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           SW  M+SA         A+ +F H   E    P+E  +  IL++C  +G  +  K IH  
Sbjct: 569 SWNCMISAFSQNKDGRRALELFCHIEFE----PNEITIVGILSACTQLGVLRHGKQIHGH 624

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           VI+       +V++A+ D Y+ CG +  A   F QS     V  +N++I A+  H    +
Sbjct: 625 VIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIF-QSSPERSVAAWNSMISAFGFHSNGGK 683

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+E+F +M+    +P+++TF+S++SACSH GLV++G   + +M   + ++   + + C+V
Sbjct: 684 AIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMV 743

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           DML R G L +A   I  MP QP P V+ +LLS C  HG+ ++G   +E L  L P+N  
Sbjct: 744 DMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVG 803

Query: 755 AHVLLS 760
            ++ LS
Sbjct: 804 YYISLS 809



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 164/681 (24%), Positives = 318/681 (46%), Gaps = 33/681 (4%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           + V  +  H    K+G    +    +L+  YS+   F     +FDE+  R+++ W  +++
Sbjct: 28  TNVTASIAHCLAFKMGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMIT 87

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A+++N  F + + ++V++   G   +   +  V+     MG    G  +H  + K  +  
Sbjct: 88  ASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLS 147

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           + F+  ++++ YAK G+++++E VF  +   D+  WN+M+ G A+  Y  ++L     M 
Sbjct: 148 DSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMA 207

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE--CSISIVNALIDMYIKSSG 296
           +     D  +   A+   +L+ +   G+ IHG  I+   +     S  N+LI +Y +   
Sbjct: 208 YSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRD 267

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLR 355
           +  A  +F+ M  KD++SWN +  G + N+   +   L H+  L G  +P+ VT  I++ 
Sbjct: 268 IQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIP 327

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C +L+ L  G  +  L L      + +VT+SLI M+ +C  V+ A    +  S +    
Sbjct: 328 LCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEH--NGHSREAQHL 385

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           + +LL  Y           + C++          T   ++ +C  SE  Q    IH   +
Sbjct: 386 FRQLLQSY-----------SQCSL---------STLLAILPSCDSSEFLQFGESIHCWQL 425

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           K GF++     +SL+  Y+N G L   F      +   D+  W  +M+     GH  EA+
Sbjct: 426 KLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEAL 485

Query: 535 TIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
             F+ + +  +   D   L  ++++C  +       S+H   +K    +++ V +A+I  
Sbjct: 486 KAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITM 545

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y +CG+I+ AR+ F  S N N +  +N +I A++ +     A+E+F  ++    +P++ T
Sbjct: 546 YGRCGEIENARIIFGFSCNRN-LCSWNCMISAFSQNKDGRRALELFCHIE---FEPNEIT 601

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            V ++SAC+  G++  G  +   +  +  +Q +      L DM S  G L+ A  + +  
Sbjct: 602 IVGILSACTQLGVLRHGKQIHGHV-IRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSS 660

Query: 714 PFQPSPTVYRSLLSGCRIHGN 734
           P + S   + S++S    H N
Sbjct: 661 P-ERSVAAWNSMISAFGFHSN 680



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 170/385 (44%), Gaps = 40/385 (10%)

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            +RP +VT SI                  CLA   G L     ++SL+  + R      +
Sbjct: 24  AARPTNVTASIA----------------HCLAFKMGALAHLPTSTSLLTAYSRAADFSSS 67

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            ++FD + Y+++  WN +++    N C    +  F  +   GV ++  T   VV      
Sbjct: 68  WALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHM 127

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            N      +HG   KTG  S  ++C++LI  Y   G+L +S     G E  D+ SW +MM
Sbjct: 128 GNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMM 187

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
               +  +  +++  F  +  + E+ D   L   +++ A +G     + IH + IKLG+ 
Sbjct: 188 RGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYK 247

Query: 582 --TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
             +     +++I  Y++C DI+ A + F +     D++ +N ++   A +  + EA ++ 
Sbjct: 248 DISHNSFENSLISLYSQCRDIQAAEILFKE-MKYKDIVSWNAMLDGLALNQRIWEAFDLL 306

Query: 640 DKMKLAN-LQPSQATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
            +M+L   +QP   T V ++  C+      +G    G  L + M   + +  S      L
Sbjct: 307 HEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNS------L 360

Query: 694 VDMLSR---------NGYLEDAKHV 709
           +DM S+         NG+  +A+H+
Sbjct: 361 IDMYSKCKDVKRAEHNGHSREAQHL 385



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 156/365 (42%), Gaps = 36/365 (9%)

Query: 38  SFLRKDP------IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           + +R+DP      + L   +S   NL+    G  +HG  +K    +DI +QN LI MY +
Sbjct: 489 NLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGR 548

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       +F     RNL SW  ++SA  QN +    L+++  ++   F PNE  +  +
Sbjct: 549 CGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIE---FEPNEITIVGI 605

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +G    G  IH   ++ R++ N FV  ++ + Y+  G +  A ++F S     V
Sbjct: 606 LSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSV 665

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN+MI  +     G +A+ +   M   G    K TFI+ L  CS     + G   +  
Sbjct: 666 AAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSN 725

Query: 272 IIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFS------ 323
           ++    VE        ++DM  ++  +  A++   +M  + +   W  L    S      
Sbjct: 726 MLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLK 785

Query: 324 ------------ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG-------KLLDLD 364
                       E +N G   SL + ++ +G   + V    +++  G        L+D+ 
Sbjct: 786 MGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSLIDVG 845

Query: 365 LGLQL 369
           +GL L
Sbjct: 846 MGLYL 850


>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
 gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 188/710 (26%), Positives = 335/710 (47%), Gaps = 14/710 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H ++   G   D+ L + +++ Y+  G       VF ++   ++  W   +    + G
Sbjct: 66  KIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAG 125

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + +Y  +K N    N   +  VMK C  +     G  +H  +LK+ +  N FVG 
Sbjct: 126 YPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGS 185

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC--GYGFEALNVVSSMLFEGI 242
           S++  Y+K      +  VF  I + D+  + +MI GY+       + A  + + ML   +
Sbjct: 186 SLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNL 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAF 301
            +++ T ++ LQ    +     G+ +H   IR  +  S  I+  ++++ Y +      A 
Sbjct: 246 EVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAA 305

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQT--ASLFHKFILSGSR--PNHVTFSILLRQC 357
            V +  +   V SWN L  G +     GQ+  A  +   +L   +  P+ VTF+ +L  C
Sbjct: 306 TVLQN-SKGTVASWNALLSGLNR---AGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +L        +    +      +  +T++LI ++ +C  V  +  +FD +  K++ ++N
Sbjct: 362 AELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYN 421

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++ GY  N    +       +   GV  +  T   ++       +      IHG  I+ 
Sbjct: 422 AMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRH 481

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           GF S   + + ++  Y   G++  +    +  E+ ++ SW AMM   +  GH  E V +F
Sbjct: 482 GFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLF 541

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             + + GEKPD   L T + + + +G     K IH FV +     +   A+++I AYAKC
Sbjct: 542 QVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKC 601

Query: 598 GDIK-GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           G +   A + F   + + D   +N +I AYA HG     +E+F +M+  N+QP + TF +
Sbjct: 602 GKLDLSAGLFFSLKYRNLDT--WNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFST 659

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V++ACSH GLV  G  +F SM S Y + P  + YGC+VD+L R G+LED    I++   +
Sbjct: 660 VLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLK 719

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQR 766
              T++ +LLS CR HGN  L    S++LL   P+N   + L+S+   Q 
Sbjct: 720 DKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQNPGIYALISEVYAQE 769



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 255/530 (48%), Gaps = 16/530 (3%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           K   F+ KS +    LK+  LG  VH   +KL  + + F+ ++LI +YSK         V
Sbjct: 147 KTITFVMKSCT---ELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGV 203

Query: 102 FDEMAERNLVSWTLIVSA------AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           F+E+  +++V++T +++       +I    F++      DM  N    N   + S++++ 
Sbjct: 204 FEEIINKDIVAYTSMITGYSETVDSIAWNAFEIA----TDMLQNNLEVNRVTLVSLLQIA 259

Query: 156 VSMGASEFGYSIHCFALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            ++GA + G S+HC++++  I   +  +  S++NFY + G   +A  V  + S   V  W
Sbjct: 260 GNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASW 318

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           NA++ G    G  F A+  +  ML E  +T D  TF N L  C+ +  F     IH   I
Sbjct: 319 NALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFI 378

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           R  +   + +  ALI++Y K + +  +  +F+++  KDV+S+N +  G+ +N    +  S
Sbjct: 379 RRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATS 438

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L +  +  G  P+  T   LL       DL  G  +   A+  GF  + +V + ++YM+ 
Sbjct: 439 LLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYS 498

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
            CG +  A ++FD++  KN+ +W  ++ G   N    +V++ F  + + G + +  +   
Sbjct: 499 ACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVT 558

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
            V+      +   + QIH  + ++         +SLI +Y   G+LD S       +  +
Sbjct: 559 AVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRN 618

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           + +W AM+SA    G +   + +F  + E   +PDE    T+L +C+  G
Sbjct: 619 LDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAG 668



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/490 (20%), Positives = 217/490 (44%), Gaps = 17/490 (3%)

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           QGC   AD    ++IH  +    +   + + + ++  Y     +  +  VF+++ + D+ 
Sbjct: 56  QGC---ADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDIS 112

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
            WN+    +     P +   L+ +  L+    N  T + +++ C +L +L LG  +   +
Sbjct: 113 LWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADS 172

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY--CFNCCDAD 431
           L       + V SSLI ++ +      +  VF+ +  K+I  +  +++GY    +    +
Sbjct: 173 LKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWN 232

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLI 490
             +   ++ ++ +EVN  T   +++        Q    +H   I+        I  +S++
Sbjct: 233 AFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIV 292

Query: 491 KSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEK 546
             Y   G   ++    + S G     +ASW A++S L   G +  A+     ++ E    
Sbjct: 293 NFYTRCGAYQSAATVLQNSKGT----VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVT 348

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           PD      +L++CA +  +    SIH + I+     +V + +A+I+ Y KC  +  ++  
Sbjct: 349 PDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYL 408

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           FDQ     DV+ YN +I  Y  + + +EA  + + M    + P  AT +S+++A + +  
Sbjct: 409 FDQLI-IKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRD 467

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           + +G  +      ++G     D    ++ M S  G +  A+ + + +  + +   + +++
Sbjct: 468 LVRGRWI-HGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLE-KKNLVSWTAMM 525

Query: 727 SGCRIHGNKE 736
            GC  +G+ +
Sbjct: 526 KGCLSNGHAD 535


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 188/731 (25%), Positives = 338/731 (46%), Gaps = 69/731 (9%)

Query: 66  VHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN- 123
           +H  ++KL    N      NLI+ Y   G F     VF     RN + W   V     + 
Sbjct: 52  MHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSA 111

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G   + L+++ ++   G + +       +K C  +     G  IH   +K   + + ++ 
Sbjct: 112 GSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLR 171

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           C+++NFY +   +  A +VF+ + + +   WN  I          + + +   M F  + 
Sbjct: 172 CALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLK 231

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            +  T +  LQ C  +   +  +QIHG + R  ++  +S+ N LI MY K+  ++ A +V
Sbjct: 232 AETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRV 291

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKF--------------ILSGS------ 343
           F+ M +++  SWN++   ++         SLF++               +LSG       
Sbjct: 292 FDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYK 351

Query: 344 ---------------RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                          +PN  + + +L+   +L  L++G +     L  GF  +  V +SL
Sbjct: 352 EEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 411

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           I M+ +  ++  A +VFDN+  +NI  WN L+SGY F     D L+    + + G++ + 
Sbjct: 412 IDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDL 471

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            T+                   +G I       CG    +++    + G   N       
Sbjct: 472 VTW-------------------NGMISGYAMWGCGKEALAVLHQTKSLGLTPN------- 505

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
                + SW A++S     G+N +++  F  + + G  P+   +  +L +CA++   Q+ 
Sbjct: 506 -----VVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKG 560

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K IH   I+ GF  +V+VA+A+ID Y+K   +K A   F +   +  +  +N +IM +A 
Sbjct: 561 KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVF-RRIQNKTLASWNCMIMGFAI 619

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
            GL  EA+ +F++M+   + P   TF +++SAC + GL+ +G   F SM + Y + P  +
Sbjct: 620 FGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLE 679

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C+VD+L R GYL++A  +I  MP +P  T++ +LL  CRIH N +  E A++ L  L
Sbjct: 680 HYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKL 739

Query: 749 LPKNDAAHVLL 759
            P N A ++L+
Sbjct: 740 EPNNSANYILM 750



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/543 (22%), Positives = 231/543 (42%), Gaps = 78/543 (14%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL----RVFDEMAERNLVSWTLIV 117
           LG ++HG ++K GF  D++L+  L+  Y +C    WGL    +VF EM     + W   +
Sbjct: 151 LGMEIHGCLIKRGFDLDVYLRCALMNFYGRC----WGLEKANQVFHEMPNPEALLWNEAI 206

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
              +Q+ +   G++++  M+ +        +  V++ C  MGA      IH +  +  ++
Sbjct: 207 ILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLD 266

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA--------------- 222
            +  +   +++ Y+K G +  A RVF S+ + +   WN+MI  YA               
Sbjct: 267 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 326

Query: 223 ------------HC--------GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
                       +C        GY  E LN++  M  EG   +  +  + LQ  S +   
Sbjct: 327 ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFL 386

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           ++G++ HG ++R+  +C + +  +LIDMY+K+  +  A  VF+ M ++++ +WN+L  G+
Sbjct: 387 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGY 446

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           S          L ++    G +P+ VT++ ++                            
Sbjct: 447 SFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG-------------------------- 480

Query: 383 NVTSSLIYMFCRCG--AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
                  Y    CG  A+ + H         N+ +W  L+SG      + D LK F  + 
Sbjct: 481 -------YAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQ 533

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           + GV  N  +   ++  C      Q   +IH   I+ GF    ++ ++LI  Y     L 
Sbjct: 534 QEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLK 593

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           N+ +     +   +ASW  M+      G   EA+++F+ + + G  PD      +L++C 
Sbjct: 594 NAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 653

Query: 561 AIG 563
             G
Sbjct: 654 NSG 656



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/557 (23%), Positives = 241/557 (43%), Gaps = 99/557 (17%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           SFL+ +   + + L     + +     Q+HG++ + G  +D+ L N LI+MYSK G    
Sbjct: 228 SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLEL 287

Query: 98  GLRVFDEMAERNLVSWTLIVSA------------------------------AIQNGEFD 127
             RVFD M  RN  SW  ++S+                               + +G F 
Sbjct: 288 ARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFL 347

Query: 128 MGLKMYV-----DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G K  V      M+  GF PN  ++ SV++    +G    G   H + L+   + + +V
Sbjct: 348 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 407

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++ Y K   + +A+ VF ++ + ++  WN+++ GY+  G   +AL +++ M  EGI
Sbjct: 408 GTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 467

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T+   + G ++   +  G++   ++ ++                 KS G+     
Sbjct: 468 KPDLVTWNGMISGYAM---WGCGKEALAVLHQT-----------------KSLGL----- 502

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
                   +V+SW  L  G S+  N   +   F +    G  PN  + + LLR C  L  
Sbjct: 503 ------TPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSL 556

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G ++ CL++  GF+++  V ++LI M+ +  +++ AH VF  +  K + +WN ++ G
Sbjct: 557 LQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMG 616

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +       + +  F  + + GV  +  TF  ++  C   +N  ++G+        G+   
Sbjct: 617 FAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSAC---KNSGLIGE--------GWK-- 663

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
                S+I  Y    +L++               +  M+  L   G+  EA  + H++  
Sbjct: 664 --YFDSMITDYRIVPRLEH---------------YCCMVDLLGRAGYLDEAWDLIHTM-- 704

Query: 543 AGEKPDEYILGTILNSC 559
              KPD  I G +L SC
Sbjct: 705 -PLKPDATIWGALLGSC 720


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 310/601 (51%), Gaps = 9/601 (1%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +HC  LK     + F    +LNFY +   +  A ++F  +   +   +  +  GY+ 
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR---QIHGLIIRSEVECS 280
                +AL+ +  +  EG  ++ + F   L+   L+   D+      +H  + +      
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLK---LLVSMDLAHLCWTLHACVYKLGHHAD 170

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             +  ALID Y     +D A  VF+ +  KD++SW  +   ++EN    ++  LF++  +
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +PN+ T S  L+ C  L   ++G  +   AL   +  +  V  +L+ ++ + G +  
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  +F+ +   ++  W+ +++ Y  +    + L  F  + ++ V  N  TF  V++ C  
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGA 519
           S +  +  QIH  ++K G +S  ++ ++++  Y   G+++NS + F    +R D+ +W  
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV-TWNT 409

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++   V  G    A+ +F  ++E   +P E    ++L + A++ A +    IH   IK  
Sbjct: 410 IIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTM 469

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           +N +  VA+++ID YAKCG I  AR+ FD+  N  D + +N +I  Y+ HG+  EA+ +F
Sbjct: 470 YNKDTVVANSLIDMYAKCGRINDARLTFDK-MNKRDEVSWNAMICGYSMHGMSMEALNLF 528

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           D M+  + +P++ TFV V+SACS+ GL+ KG   F+SM   Y ++P  + Y C+V +L R
Sbjct: 529 DMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGR 588

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G  ++A  +I  + +QPS  V+R+LL  C IH   +LG   ++ +L + P +DA HVLL
Sbjct: 589 LGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLL 648

Query: 760 S 760
           S
Sbjct: 649 S 649



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 215/416 (51%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P      L L  ++    L   +H  + KLG   D F+   LI  YS  G       VF
Sbjct: 135 NPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVF 194

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D++  +++VSWT +V+   +N  ++  L+++  M+  G+ PN F +   +K C+ + A  
Sbjct: 195 DDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFN 254

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G S+H  ALK   + + FVG ++L  YAK G++  A+R+F  +   D+  W+ MI  YA
Sbjct: 255 VGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYA 314

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EAL++   M    +  + +TF + LQ C+     D+G+QIH  +++  +  ++ 
Sbjct: 315 QSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVF 374

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NA++D+Y K   ++ + K+FE + D++ ++WNT+  G+ +  +  +  +LF   +   
Sbjct: 375 VSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHD 434

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            +P  VT+S +LR    L  L+ GLQ+  L +   +  +  V +SLI M+ +CG +  A 
Sbjct: 435 MQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDAR 494

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             FD ++ ++  +WN ++ GY  +    + L  F  +  +  + N  TF  V+  C
Sbjct: 495 LTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSAC 550



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/610 (23%), Positives = 278/610 (45%), Gaps = 34/610 (5%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           + G  +H HI+K G + D+F QN L+  Y +        ++FDEM + N +S+  +    
Sbjct: 52  IAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGY 111

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            ++ +F   L   + +   G   N F   +++K+ VSM  +   +++H    K+    + 
Sbjct: 112 SRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADA 171

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG ++++ Y+  G+V  A  VF  I   D+  W  M+  YA   +  E+L + + M   
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +T   AL+ C  +  F++G+ +HG  ++   +  + +  AL+++Y KS  +  A
Sbjct: 232 GYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDA 291

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++FE M   D+I W+ +   ++++    +   LF +   +   PN+ TF+ +L+ C   
Sbjct: 292 QRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASS 351

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           + LDLG Q+    L  G      V+++++ ++ +CG +E +  +F+ +  +N  TWN ++
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY         +  F ++ E  ++    T+  V+         +   QIH   IKT ++
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + +SLI  Y   G+++++    +   + D  SW AM+      G + EA+ +F  +
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                KP++     +L++C+  G                    +Y   A  ++ +K  DI
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGL-------------------LYKGQAHFESMSKDYDI 572

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K              +  Y  ++      G   EAM++  ++     QPS   + +++ A
Sbjct: 573 KPC------------IEHYTCMVWLLGRLGRFDEAMKLIGEIA---YQPSVMVWRALLGA 617

Query: 661 CSHKGLVDKG 670
           C     VD G
Sbjct: 618 CVIHKKVDLG 627



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 229/479 (47%), Gaps = 13/479 (2%)

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           AD   G+ +H  I++      +   N L++ Y++S+ +  A K+F+ M   + IS+ TL 
Sbjct: 49  ADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLA 108

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC--- 376
            G+S +    Q      +    G   N   F+ LL+     L + + L   C  LH    
Sbjct: 109 QGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLK-----LLVSMDLAHLCWTLHACVY 163

Query: 377 --GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   +  V ++LI  +   G V++A  VFD++  K++ +W  +++ Y  NC   + L+
Sbjct: 164 KLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQ 223

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  +   G + N  T    +++C   E   +   +HG  +K  +    ++  +L++ Y 
Sbjct: 224 LFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYA 283

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G++ ++        + D+  W  M++       + EA+ +F  + +    P+ +   +
Sbjct: 284 KSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFAS 343

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +L +CA+  +    K IH  V+K G N+ V+V++A++D YAKCG+I+ +   F++  + N
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           DV  +NT+I+ Y   G    AM +F  M   ++QP++ T+ SV+ A +    ++ G L  
Sbjct: 404 DV-TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG-LQI 461

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            S+  +            L+DM ++ G + DA+   + M  +     + +++ G  +HG
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMHG 519



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 6/174 (3%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L  S +L +   G Q+H   +K  +  D  + N+LI MY+KCG        FD+M +R+ 
Sbjct: 446 LRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDE 505

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  ++     +G     L ++  M+     PN+     V+  C + G    G + H  
Sbjct: 506 VSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQA-HFE 564

Query: 171 ALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
           ++    +  P +    C V     +LG    A ++   I+    V  W A++G 
Sbjct: 565 SMSKDYDIKPCIEHYTCMVW-LLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGA 617


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 172/649 (26%), Positives = 307/649 (47%), Gaps = 65/649 (10%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E N      ++N YAKLG ++ A  +F  + + DV  WN ++ GY   G    AL++  S
Sbjct: 89  EPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVS 148

Query: 237 MLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM----- 290
           M   G ++ + +TF   ++ C  +   ++  Q+ GL+ + + +    +  AL+DM     
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208

Query: 291 --------------------------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
                                     Y KS G+D+A ++F+ M ++DV+SWN +    S+
Sbjct: 209 AMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSK 268

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           +    +   +       G RP+  T++  L  C +L  L+ G QL    +      +  V
Sbjct: 269 SGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYV 328

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S+++ ++ +CG  + A  VF ++  +N  +W  L+ G+    C ++ ++ F  +    +
Sbjct: 329 ASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELM 388

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-- 502
            V+      ++  CC + +  +  Q+H   +K+G +    + +SLI  Y   G L N+  
Sbjct: 389 AVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAEL 448

Query: 503 -----------------------------FEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
                                         EF +     ++ +W AM+ A +  G   + 
Sbjct: 449 IFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDG 508

Query: 534 VTIFHS-LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + ++   L E    PD     T+   CA IGA +    I    +K+G   +  V +AVI 
Sbjct: 509 LKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVIT 568

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG I  AR AFD   +  D++ +N +I  Y+ HG+  +A+EIFD +     +P   
Sbjct: 569 MYSKCGRISEARKAFD-FLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYI 627

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           ++V+V+S CSH GLV++G   F  M   + + P  + + C+VD+L R G+L +AK++I+ 
Sbjct: 628 SYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDE 687

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           MP +P+  V+ +LLS C+ HGN +L E A++ L  L       ++LL+K
Sbjct: 688 MPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAK 736



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 163/673 (24%), Positives = 285/673 (42%), Gaps = 102/673 (15%)

Query: 58  KSRVLGTQ-VHGHIVKLGFTNDIFLQNNLIAMYSKCG----------------------- 93
           +S + G + +H  ++ +G  + +FLQN L+  Y  CG                       
Sbjct: 38  RSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPNVITHNI 97

Query: 94  ----YFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMP 143
               Y   G     + +F  M  R++ SW  I+S   Q+G+F   L ++V M+  G  +P
Sbjct: 98  MMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLP 157

Query: 144 NEFAVGSVMKVCVSMGASEFGYS------------------------IHCFALKI----- 174
           N F  G VMK C ++G  E                            + C A+       
Sbjct: 158 NAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQF 217

Query: 175 -RIEKNPFVGC--SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
            RI KNP + C  S+L  YAK   V  A  +F S+   DV  WN +I   +  G   EAL
Sbjct: 218 SRI-KNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREAL 276

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++V  M  +G+  D  T+ ++L  C+ ++  + G+Q+H  +IR+       + +A++++Y
Sbjct: 277 DMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELY 336

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K      A +VF  + D++ +SW  L GGF +     ++  LF++        +    +
Sbjct: 337 AKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALA 396

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV------- 404
            L+  C   +D+ LG QL  L L  G      V++SLI M+ +CG ++ A  +       
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAER 456

Query: 405 ------------------------FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
                                   FD++S +N+ TWN +L  Y  +  + D LK + ++ 
Sbjct: 457 DIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDML 516

Query: 441 -ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            E  V  +  T+  +   C      ++  QI G  +K G      + +++I  Y   G++
Sbjct: 517 TEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRI 576

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             + +  +   R D+ SW AM++     G   +A+ IF  ++  G KPD      +L+ C
Sbjct: 577 SEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGC 636

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +  G  +  K  +  ++K   N    +   S ++D   + G +  A+   D+        
Sbjct: 637 SHSGLVEEGK-FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAE 695

Query: 618 VYNTLIMAYAHHG 630
           V+  L+ A   HG
Sbjct: 696 VWGALLSACKTHG 708



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 191/433 (44%), Gaps = 66/433 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + ++ +Y+KCG F    
Sbjct: 287 VRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAK 346

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF  + +RN VSWT+++   +Q G F   ++++  M+      ++FA+ +++  C +  
Sbjct: 347 RVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTM 406

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK--------------------------- 192
               G  +H   LK    +   V  S+++ YAK                           
Sbjct: 407 DICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMIT 466

Query: 193 ----LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
               +G++A A   F  +S+ +V  WNAM+G Y   G   + L + S ML E  +  D  
Sbjct: 467 AYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWV 526

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  ++  +    S+VNA+I MY K   +  A K F+ +
Sbjct: 527 TYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFL 586

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
           + KD++SWN +  G+S++    Q   +F   +  G++P+++++  +L  C          
Sbjct: 587 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCS--------- 637

Query: 368 QLQCLALHCGFLDE-----------ENVTSSLIYMFC------RCGAVEMAHSVFDNVSY 410
                  H G ++E            N++  L +  C      R G +  A ++ D +  
Sbjct: 638 -------HSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPM 690

Query: 411 KNIT-TWNELLSG 422
           K     W  LLS 
Sbjct: 691 KPTAEVWGALLSA 703



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 169/371 (45%), Gaps = 40/371 (10%)

Query: 379 LDEENVTSSLIYM--FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           + E NV +  I M  + + G++  A  +F  +  +++ +WN ++SGY  +    + L  F
Sbjct: 87  ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146

Query: 437 CNIWESGVEV-NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS-------------- 481
            ++ ++G  + N  TF  V+++C      ++  Q+ G + K  F S              
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK--FDSQDDPDVQTALVDML 204

Query: 482 --CG----------------YIC-SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             CG                 IC +S++  Y     +D++ E        D+ SW  ++S
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           AL   G   EA+ +   +   G +PD     + L +CA + + +  K +H  VI+   + 
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHI 324

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           + YVASA+++ YAKCG  K A+  F  S    + + +  LI  +  +G  SE++E+F++M
Sbjct: 325 DPYVASAMVELYAKCGCFKEAKRVF-SSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM 383

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +   +   Q    +++S C +   +  G  L  S+  + G   +      L+ M ++ G 
Sbjct: 384 RAELMAVDQFALATLISGCCNTMDICLGSQL-HSLCLKSGHTRAVVVSNSLISMYAKCGN 442

Query: 703 LEDAKHVIEIM 713
           L++A+ +   M
Sbjct: 443 LQNAELIFNFM 453



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 83/178 (46%), Gaps = 7/178 (3%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L   L SC A  A    +++H  +I +G  + V++ + ++ AY  CG +  AR       
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              +VI +N ++  YA  G +S+A+E+F +M   ++    A++ ++MS     G      
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDV----ASWNTIMSGYYQSGQFLNAL 143

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP---FQPSPTVYRSLL 726
            +F SM       P+   +GC++      G+ E A  ++ ++     Q  P V  +L+
Sbjct: 144 DIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALV 201


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 291/582 (50%), Gaps = 7/582 (1%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +   +++ Y   G    A  VF  I   D   W  M+  Y       E + +   ++  G
Sbjct: 78  IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG 137

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D   F  AL+ C+ + D D G++IH  +++     ++ ++  L+DMY K   +  A 
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAH 196

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF  +  ++V+ W ++  G+ +N    +   LF++   +    N  T+  L+  C KL 
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G       +  G      + +SL+ M+ +CG +  A  VF+  S+ ++  W  ++ 
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  N    + L  F  +    ++ N  T   V+  C   EN ++   +HG  IK G   
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD 376

Query: 482 CGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              + ++L+  Y   +   D  + F   +E+ D+ +W +++S     G  HEA+ +FH +
Sbjct: 377 TN-VANALVHMYAKCYQNRDAKYVFEMESEK-DIVAWNSIISGFSQNGSIHEALFLFHRM 434

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCG 598
                 P+   + ++ ++CA++G+     S+H + +KLGF  ++ V+V +A++D YAKCG
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           D + AR+ FD +    + I ++ +I  Y   G    ++E+F++M     +P+++TF S++
Sbjct: 495 DPQSARLIFD-TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 553

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC H G+V++G   F SM   Y   PS   Y C+VDML+R G LE A  +IE MP QP 
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 613

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              + + L GC +H   +LGE   +K+L L P + + +VL+S
Sbjct: 614 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVS 655



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 176/708 (24%), Positives = 311/708 (43%), Gaps = 50/708 (7%)

Query: 10  FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
           F   P C    T K +  L   N   S  +    P FL   LS   N+ S     Q HG 
Sbjct: 13  FGFPPRCVSFTTIKEL-ILTEENDGSSLHYAASSPCFLL--LSKCTNIDSL---RQSHGV 66

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           +   G   DI +   L+++Y   GY      VFD++ E +   W +++     N E    
Sbjct: 67  LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEV 126

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           +K+Y  +  +GF  ++      +K C  +   + G  IHC  +K+    N  V   +L+ 
Sbjct: 127 VKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDM 185

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK G++ +A +VF  I+  +V CW +MI GY       E L + + M    +  ++YT+
Sbjct: 186 YAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              +  C+ ++    G+  HG +++S +E S  +V +L+DMY+K   +  A +VF   + 
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            D++ W  +  G++ N +  +  SLF K      +PN VT + +L  CG + +L+LG  +
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L++  G  D  NV ++L++M+ +C     A  VF+  S K+I  WN ++SG+  N   
Sbjct: 366 HGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--SSCGYICS 487
            + L  F  +    V  NG T   +   C    +  +   +H   +K GF  SS  ++ +
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +L+  Y   G   ++    +  E  +  +W AM+     QG    ++ +F  +++  +KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           +E    +IL++C   G     K     + K   F       + ++D  A+ G+++     
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE----- 599

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
                                      +A++I +KM    +QP    F + +  C     
Sbjct: 600 ---------------------------QALDIIEKMP---IQPDVRCFGAFLHGCGMHSR 629

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLV-DMLSRNGYLEDAKHVIEIM 713
            D G ++ K M     + P    Y  LV ++ + +G    AK V  +M
Sbjct: 630 FDLGEIVIKKM---LDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  281 bits (719), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 178/662 (26%), Positives = 327/662 (49%), Gaps = 15/662 (2%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFALKI-RIEKNPFVGC 184
            L++Y  M  +G  P++      +    ++  +E    G  +H  AL+   +  + F G 
Sbjct: 99  ALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGN 158

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++ FYA  G  A A RVF  + + DV  WN+++      G   +A   V  M+  G+ +
Sbjct: 159 TLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPV 218

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  + ++ L  C    D   G  +HGL+++  +   +++ NAL+DMY K   ++ +  VF
Sbjct: 219 NVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVF 278

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M +K+ +SWN+  G F+          +F         P  VT S LL     L    
Sbjct: 279 NGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFH 338

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG +L   ++      +  + ++L+ M+ + G  E A ++F+N+  +N+ +WN +++   
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N  +A+  +    + ++G   N  T   ++  C R  + +M  QIH   I+    S  +
Sbjct: 399 QNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++LI  Y   GQL+ +    + +E+ D  S+  ++          E++ +F  +  AG
Sbjct: 459 VSNALIDVYAKCGQLNLARYIFDRSEK-DGVSYNTLIVGYSQSQCCFESLHLFQQMRLAG 517

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            + D       L++C+ + A+++ K IH  ++K   ++  ++A++++D Y K G +  A 
Sbjct: 518 IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTAS 577

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F++     DV  +NT+I+ Y  HG +  A E+FD MK   ++    ++++V+S CSH 
Sbjct: 578 KIFNR-ITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHG 636

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F  M +Q  ++P    Y C+VD+L R G L ++  +I  MPF+ +  V+ +
Sbjct: 637 GLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGA 695

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIK 784
           LL  CRIHG+ EL   A+E L  L P+N   + LL         N+    G+ N  +G+K
Sbjct: 696 LLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLR--------NMYSESGMWNEANGVK 747

Query: 785 TV 786
            +
Sbjct: 748 KL 749



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/628 (25%), Positives = 293/628 (46%), Gaps = 8/628 (1%)

Query: 63  GTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G ++H   ++ G    D+F  N L+  Y+ CG      RVFDEM  R++VSW  +VSA +
Sbjct: 137 GAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALL 196

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG  +   +  V M  +G   N  ++ S++  C +     FG  +H   LK  +     
Sbjct: 197 TNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVN 256

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++ Y K GD+ ++  VF  +   +   WN+ IG +AH G+  + L +   M    
Sbjct: 257 LGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHD 316

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +T    T  + L     +  F +G+++HG  IR  VE  I I N L+DMY K    + A 
Sbjct: 317 VTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKAS 376

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +FE +  ++V+SWN +    ++N    +   L  +   +G  PN  T   LL  C ++ 
Sbjct: 377 AIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVA 436

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + +G Q+   ++    + +  V+++LI ++ +CG + +A  +FD  S K+  ++N L+ 
Sbjct: 437 SVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIV 495

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  + C  + L  F  +  +G+E +  +F   +  C      +   +IHG ++K    S
Sbjct: 496 GYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDS 555

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SL+  Y   G LD + +  N   + D+ASW  M+      G    A  +F  + 
Sbjct: 556 HPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMK 615

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI- 600
           + G + D      +L+ C+  G   R K     +I      +    + ++D   + G + 
Sbjct: 616 DDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLS 675

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM-S 659
           + A +  +  F +N   V+  L+ +   HG +  A        L  L+P  + + +++ +
Sbjct: 676 ESAEIIRNMPFRANS-DVWGALLGSCRIHGDIELAR--LAAEHLFELKPENSGYYTLLRN 732

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             S  G+ ++   + K M S+  +Q +P
Sbjct: 733 MYSESGMWNEANGVKKLMKSR-KVQKNP 759



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 145/566 (25%), Positives = 257/566 (45%), Gaps = 21/566 (3%)

Query: 180 PFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           P  G  +L+ YA L D+ +A  +   +         WN++    A      EAL V + M
Sbjct: 48  PLAGALLLS-YAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRM 106

Query: 238 LFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLIIRSEVECS-ISIVNALIDMYIK 293
           +  G+  D  TF  AL   + VA  +    G ++H   +R  +  + +   N L+  Y  
Sbjct: 107 VRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAV 166

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
                 A +VF+ M  +DV+SWN+L      N             + SG   N  +   +
Sbjct: 167 CGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSI 226

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  CG   D   GL +  L L  G     N+ ++L+ M+ + G +E +  VF+ +  KN 
Sbjct: 227 LPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNE 286

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN  +  +       DVL+ F  + E  V     T   ++          +  ++HG 
Sbjct: 287 VSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGY 346

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            I+    S  +I ++L+  Y  FG  + +       E  ++ SW AM++ L   G   EA
Sbjct: 347 SIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEA 406

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
             +   + + GE P+ + L  +L +C+ + + +  K IH + I+    ++++V++A+ID 
Sbjct: 407 FRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDV 466

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YAKCG +  AR  FD+S    D + YNTLI+ Y+      E++ +F +M+LA ++    +
Sbjct: 467 YAKCGQLNLARYIFDRS--EKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVS 524

Query: 654 FVSVMSACSH-----KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           F+  +SACS+     +G    G L+ + +DS       P     L+D+ ++ G L+ A  
Sbjct: 525 FMGCLSACSNLSAFKQGKEIHGVLVKRLLDSH------PFLANSLLDVYTKGGMLDTASK 578

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGN 734
           +   +  Q     + +++ G  +HG 
Sbjct: 579 IFNRIT-QKDVASWNTMILGYGMHGQ 603



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 185/364 (50%), Gaps = 3/364 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++HG+ ++    +DIF+ N L+ MY+K G       +F+ +  RN+VSW  +++   
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG      ++ ++M+ NG  PN F + +++  C  + + + G  IH ++++  +  + F
Sbjct: 399 QNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G +  A  +F     D V  +N +I GY+     FE+L++   M   G
Sbjct: 459 VSNALIDVYAKCGQLNLARYIFDRSEKDGV-SYNTLIVGYSQSQCCFESLHLFQQMRLAG 517

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  +F+  L  CS ++ F  G++IHG++++  ++    + N+L+D+Y K   +D A 
Sbjct: 518 IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTAS 577

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F R+  KDV SWNT+  G+  +        LF      G   +HV++  +L  C    
Sbjct: 578 KIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGG 637

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
            +D G +     +      ++   + ++ +  R G +  +  +  N+ ++ N   W  LL
Sbjct: 638 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALL 697

Query: 421 SGYC 424
            G C
Sbjct: 698 -GSC 700



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 14/293 (4%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N  C +SF       L   L     + S  +G Q+H   ++    +D+F+ N LI +Y+K
Sbjct: 416 NGECPNSFT------LVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAK 469

Query: 92  CGYFGWGLRVFDEMAERNLVSW-TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           CG       +FD  +E++ VS+ TLIV  +     F+  L ++  M+  G   +  +   
Sbjct: 470 CGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCCFE-SLHLFQQMRLAGIEHDAVSFMG 527

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +  C ++ A + G  IH   +K  ++ +PF+  S+L+ Y K G +  A ++F  I+  D
Sbjct: 528 CLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKD 587

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN MI GY   G    A  +   M  +GI  D  ++I  L  CS     D G++   
Sbjct: 588 VASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFS 647

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFG 320
            +I   ++        ++D+  ++  +  + ++   M   A+ DV  W  L G
Sbjct: 648 QMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDV--WGALLG 698


>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
 gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
          Length = 734

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/670 (24%), Positives = 326/670 (48%), Gaps = 13/670 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  + + G+ +  +L+  ++ MY+KCG        FDE+A++N   W L++S   +
Sbjct: 33  GRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMISGYAR 92

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPF 181
           +G+    L+++  M      PN F   S +  C  +G  E G  IH   L+ R I  +  
Sbjct: 93  SGKNREALELFHKMD---IPPNGFIFASALAACAGLGDLEQGREIHKRVLESRSIASDVV 149

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  YA+ G V    ++F ++   ++  WNAMI  +  C Y  +AL +   M  E 
Sbjct: 150 VQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRER 209

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  + + F + L  C+ + +  +G  IH  I    ++  I + NALI+MY K   MD A 
Sbjct: 210 LEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEAL 269

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF  +A +DV +W ++  G+++     +  + + +       P   TF  LL  C  L 
Sbjct: 270 EVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTL- 328

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             + G  L       GF     V ++L++M+ RCG++E A  +F  +  K+  +W+ +++
Sbjct: 329 --EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVT 386

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +         L  F  +   G++++  TF   ++ C    + ++   I   I  +G   
Sbjct: 387 SHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDK 446

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I + L+ +Y   G ++ + +  +  E  D+ +W  M+     QG +  A+ +FH + 
Sbjct: 447 MDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMK 506

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDI 600
             G +PD     ++L +C+ +   +  + +H  ++   G     ++ + +I+ YA+CG +
Sbjct: 507 PEGVEPDSVTFSSVLQACSNL---EDGREVHARILAAQGGKMSDFLGNGLINMYARCGSM 563

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + AR  F +S + +  I ++ ++   A HG   + ++ +  M    + P   T ++++++
Sbjct: 564 RDARQIF-ESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNS 622

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GL D+ C  F  + S + +    + Y C+VD+L R G L++A+ +I ++  +P   
Sbjct: 623 CSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELISMID-RPDVV 681

Query: 721 VYRSLLSGCR 730
              ++L+ C+
Sbjct: 682 TLNTMLAACK 691



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 277/585 (47%), Gaps = 14/585 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
             A +L+    L     G ++H  +++     +D+ +QN+L+ MY++CG    G+++FD 
Sbjct: 114 IFASALAACAGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDA 173

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  +NLVSW  ++SA +Q    +  L++Y  MK     PN F   S++  C S+G  + G
Sbjct: 174 MPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLG 233

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            SIH     + ++++  +  +++N Y+K G +  A  VF  +++ DV  W +MI GYA  
Sbjct: 234 SSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQL 293

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+G EA      M  + ++    TF+  L  CS +   + G+ +H  +     E    + 
Sbjct: 294 GFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVE 350

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+ MY +   ++ A  +F +M  KD +SW+ +    ++  +PG+  +LF + IL G +
Sbjct: 351 TALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQ 410

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            +  TF   L+ C    D  L   ++ L    G    +++ + L+  + +CG +E A  +
Sbjct: 411 LSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKI 470

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +  +++ TW  ++ GY         L+ F  +   GVE +  TF  V++ C   E+ 
Sbjct: 471 FDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLEDG 530

Query: 465 QMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           +   ++H  I+   G     ++ + LI  Y   G + ++ +     +R    SW A+M+ 
Sbjct: 531 R---EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTL 587

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGF 580
               G + + +  +  +V  G  PD   L  ILNSC+  G          ++I   +L  
Sbjct: 588 CARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPH 647

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
             E Y    ++D   + G +  A        +  DV+  NT++ A
Sbjct: 648 LDEHY--QCMVDLLCRAGRLDEAEELISM-IDRPDVVTLNTMLAA 689



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 210/468 (44%), Gaps = 13/468 (2%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +   LQ C    +   GR++H  + RS    S  +   ++ MY K   +  A   F+ +A
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           DK+   WN +  G++ +    +   LFHK  +    PN   F+  L  C  L DL+ G +
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKMDIP---PNGFIFASALAACAGLGDLEQGRE 133

Query: 369 LQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           +    L    +  + V  +SL+ M+ RCG+V     +FD +  KN+ +WN ++S   F  
Sbjct: 134 IHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISA--FVQ 191

Query: 428 CD--ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           CD     L+ +  +    +E NG  F  ++  C    N Q+   IH  I   G      +
Sbjct: 192 CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSLGLQRDIVM 251

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++LI  Y   G +D + E  +G    D+ +W +M++     G   EA   +  +     
Sbjct: 252 ENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDRMRRDCV 311

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            P       +L++C+ +   ++ K +H  V   GF +   V +A++  Y++CG ++ A  
Sbjct: 312 SPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEF 368

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F +     D + ++ ++ ++A  G   +A+ +F +M L  +Q S  TF S + ACS K 
Sbjct: 369 LFAK-MQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLK- 426

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              +     + +    G+         LV   S+ G +E+A+ + + M
Sbjct: 427 RDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRM 474


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 271/511 (53%), Gaps = 4/511 (0%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA-LIDMYIKSSGMDYAFKVFERMADKD 311
           LQ C    D ++GR++H ++  S   C+  ++N  +I MY        +  VF+++  K+
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 171

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +  WN +   ++ N+      S+F + I ++  +P++ T   +++ C  LLDL LG  + 
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMA-HSVFDNVSYKNITTWNELLSGYCFNCCD 429
            +A     + +  V ++LI M+ +CG VE A   VFD +  K +++WN LL GY  N   
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  +  + +SG++ +  T   ++  C R ++     +IHG  ++ G +   +I  SL
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 351

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y+  G+   +    +G E   + SW  M++     G   EA+ +F  ++  G +P E
Sbjct: 352 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 411

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             +  +  +C+ + A +  K +H F +K     +++V+S++ID YAK G I  ++  FD+
Sbjct: 412 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 471

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
                DV  +N +I  Y  HG   EA+E+F+KM    L+P   TF  ++ ACSH GLV+ 
Sbjct: 472 -LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVED 530

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G   F  M + + ++P  + Y C+VDML R G ++DA  +IE MP  P   ++ SLLS C
Sbjct: 531 GLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 590

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           RIHGN  LGE  + KLL L P+    +VL+S
Sbjct: 591 RIHGNLGLGEKVANKLLELEPEKPENYVLIS 621



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 275/605 (45%), Gaps = 38/605 (6%)

Query: 6   RAFLFADKPSCHFHATRKRIHRLC--GNNQFCSDSFLRKDPIFLAKSLSLSENL------ 57
           ++  FA+  +    ++   I +LC  GN +   D   R+    +  S   SE +      
Sbjct: 55  KSLSFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVVLDSAQRSEAMGVLLQA 114

Query: 58  ----KSRVLGTQVHGHI-VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
               K   +G ++H  +     F ND  L   +I MYS CG       VFD++  +NL  
Sbjct: 115 CGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQ 174

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           W  IVSA  +N  F+  + ++ ++       P+ F +  V+K C  +     G  IH  A
Sbjct: 175 WNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMA 234

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVA-AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            K+ +  + FVG +++  Y K G V  A +RVF  + +  V  WNA++ GYA      +A
Sbjct: 235 TKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKA 294

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L++   M   G+  D +T  + L  CS +     G +IHG  +R+ +     I  +L+ +
Sbjct: 295 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSL 354

Query: 291 YIKSSGMDYAFKV-FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           YI   G  +A +V F+ M  + ++SWN +  G+S+N  P +  +LF + +  G +P  + 
Sbjct: 355 YI-CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIA 413

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              +   C +L  L LG +L C AL     ++  V+SS+I M+ + G + ++  +FD + 
Sbjct: 414 IMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR 473

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE------- 462
            K++ +WN +++GY  +    + L+ F  +   G++ +  TF  ++  C  +        
Sbjct: 474 EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLE 533

Query: 463 --NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGA 519
             NQ +   +H    K    +C      ++      G++D++           D   W +
Sbjct: 534 YFNQML--NLHNIEPKLEHYTC------VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585

Query: 520 MMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++S+    G+      + + L+E   EKP+ Y+L  I N  A  G +   + +   +  +
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPEKPENYVL--ISNLFAGSGKWDDVRRVRGRMKDI 643

Query: 579 GFNTE 583
           G   +
Sbjct: 644 GLQKD 648


>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera]
 gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
          Length = 617

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 179/574 (31%), Positives = 283/574 (49%), Gaps = 42/574 (7%)

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  EAL++ S +    +   K+TF   L+  + +     G+ +H  +I++     I   
Sbjct: 12  GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 71

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL DMY+K   + YA KVFE M  +++ S N    GFS N    +    F +  L   R
Sbjct: 72  TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 131

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT + +L  C     ++L  Q+ CLA+  G   +  V ++++ M+  CG + +A  V
Sbjct: 132 PNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKV 188

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYVVETCCRSEN 463
           FD +  KN+ ++N  +SG   N     V   F ++ ES  EV N  T   ++  C +   
Sbjct: 189 FDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLY 248

Query: 464 QQMVGQIHGAIIKTG--------------FSSCG------------------YICSSLIK 491
            +   QIHG ++K                +S CG                     +S+I 
Sbjct: 249 IRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIA 308

Query: 492 SYVNFGQLDNSFEFSNGAE----RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
             +  GQ D + E     E      D A+W  M+S    QG   EA   FH +  AG   
Sbjct: 309 GMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIA 368

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
               + ++L +C+A+ A Q  K IH   I+   +T+ ++++A+ID Y KCG    AR  F
Sbjct: 369 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 428

Query: 608 DQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
            Q     +D   +N +I  Y  +G    A EIF++M+   +QP+ AT VS++S CSH G 
Sbjct: 429 CQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGE 488

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           +D+G  LFK M+  YG+ P+ + +GC+VD+L R+G L++A+ +I  MP + S +V+ SLL
Sbjct: 489 IDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVFASLL 547

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             CR H +  LGE  ++KL  L P++    V+LS
Sbjct: 548 GACRHHSDSALGEEMAKKLSELEPQDPTPFVILS 581



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 204/457 (44%), Gaps = 46/457 (10%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L  S  L+  L+ ++L TQ    ++K GF  DI+    L  MY K     + L+VF+
Sbjct: 37  PFLLKASAKLNSPLQGQILHTQ----LIKTGFHLDIYAATALADMYMKLHLLSYALKVFE 92

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           EM  RNL S  + +S   +NG F   L  +  +    F PN   + SV+  C S+   E 
Sbjct: 93  EMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPACASV---EL 149

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
              +HC A+K+ +E + +V  +V+  Y+  G++  A++VF  I   +V  +NA I G   
Sbjct: 150 DGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQ 209

Query: 224 CGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G      +V   +L   G   +  T ++ L  CS +     GRQIHGL+++ E+     
Sbjct: 210 NGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTM 269

Query: 283 IVNALIDMYIKS--------------------------SGM------DYAFKVFERMA-- 308
           +  AL+DMY K                           +GM      D A ++FE++   
Sbjct: 270 VGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPE 329

Query: 309 --DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
             + D  +WNT+  GFS+     +    FHK   +G   +  + + LLR C  L  L  G
Sbjct: 330 GLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSG 389

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNELLSGYC 424
            ++    +      +E ++++LI M+ +CG   +A  VF     K  +   WN ++SGY 
Sbjct: 390 KEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYG 449

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            N       + F  + E  V+ N  T   ++  C  +
Sbjct: 450 RNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHT 486



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 258/624 (41%), Gaps = 68/624 (10%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  + NG +   L +Y  + ++  + ++F    ++K    + +   G  +H   +K   
Sbjct: 5   IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             + +   ++ + Y KL  ++ A +VF  +   ++   N  I G++  GY  EAL     
Sbjct: 65  HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 124

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           +       +  T  + L  C   A  ++  Q+H L I+  VE  I +  A++ MY     
Sbjct: 125 VGLGNFRPNSVTIASVLPAC---ASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGE 181

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLR 355
           +  A KVF+++ DK+V+S+N    G  +N  P     +F   +  SG  PN VT   +L 
Sbjct: 182 LVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILS 241

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNIT 414
            C KLL +  G Q+  L +      +  V ++L+ M+ +CG    A+ +F  +S  +N+ 
Sbjct: 242 ACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLV 301

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT-------------------FFY-- 453
           TWN +++G   N      ++ F  +   G+E +  T                   FF+  
Sbjct: 302 TWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKM 361

Query: 454 --------------VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
                         ++  C      Q   +IHG  I+T   +  +I ++LI  Y+  G  
Sbjct: 362 QSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGH- 420

Query: 500 DNSFEFSNGAERL---------DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
                 S  A R+         D A W AM+S     G    A  IF+ + E   +P+  
Sbjct: 421 ------SYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSA 474

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
            L +IL+ C+  G   R   +   + +  G N        ++D   + G +K A+    +
Sbjct: 475 TLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHE 534

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS----ACSHKG 665
                 V V+ +L+ A  HH   +   E+    KL+ L+P   T   ++S         G
Sbjct: 535 -MPEASVSVFASLLGACRHHSDSALGEEM--AKKLSELEPQDPTPFVILSNIYAVQGRWG 591

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDC 689
            V++     + M +  G++  P C
Sbjct: 592 DVER----VREMMNDRGLKKPPGC 611



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 134/299 (44%), Gaps = 39/299 (13%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAA 120
            G Q+HG +VK+    D  +   L+ MYSKCG + W   +F E++  RNLV+W  +++  
Sbjct: 251 FGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGM 310

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEF---------------------------------- 146
           + NG+ D+ ++++  ++  G  P+                                    
Sbjct: 311 MLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASL 370

Query: 147 -AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-- 203
            ++ S+++ C ++ A + G  IH   ++  I+ + F+  ++++ Y K G    A RVF  
Sbjct: 371 KSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQ 430

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
           + I  DD   WNAMI GY   G    A  + + M  E +  +  T ++ L  CS   + D
Sbjct: 431 FQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEID 490

Query: 264 IGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            G Q+  ++ R   +  +      ++D+  +S  +  A ++   M +  V  + +L G 
Sbjct: 491 RGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGA 549



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVSWTLIVSAA 120
           G ++HGH ++     D F+   LI MY KCG+     RVF   ++   +   W  ++S  
Sbjct: 389 GKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGY 448

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKN 179
            +NG++    +++  M+     PN   + S++ VC   G  + G+ +  F +  R    N
Sbjct: 449 GRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQL--FKMMNRDYGLN 506

Query: 180 P---FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           P     GC V +   + G +  A+ + + +    V  + +++G   H
Sbjct: 507 PTSEHFGCMV-DLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRH 552


>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 179/574 (31%), Positives = 283/574 (49%), Gaps = 42/574 (7%)

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  EAL++ S +    +   K+TF   L+  + +     G+ +H  +I++     I   
Sbjct: 72  GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 131

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL DMY+K   + YA KVFE M  +++ S N    GFS N    +    F +  L   R
Sbjct: 132 TALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFR 191

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT + +L  C     ++L  Q+ CLA+  G   +  V ++++ M+  CG + +A  V
Sbjct: 192 PNSVTIASVLPACA---SVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKV 248

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV-NGCTFFYVVETCCRSEN 463
           FD +  KN+ ++N  +SG   N     V   F ++ ES  EV N  T   ++  C +   
Sbjct: 249 FDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLY 308

Query: 464 QQMVGQIHGAIIKTG--------------FSSCG------------------YICSSLIK 491
            +   QIHG ++K                +S CG                     +S+I 
Sbjct: 309 IRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIA 368

Query: 492 SYVNFGQLDNSFEFSNGAE----RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
             +  GQ D + E     E      D A+W  M+S    QG   EA   FH +  AG   
Sbjct: 369 GMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIA 428

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
               + ++L +C+A+ A Q  K IH   I+   +T+ ++++A+ID Y KCG    AR  F
Sbjct: 429 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 488

Query: 608 DQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
            Q     +D   +N +I  Y  +G    A EIF++M+   +QP+ AT VS++S CSH G 
Sbjct: 489 CQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGE 548

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           +D+G  LFK M+  YG+ P+ + +GC+VD+L R+G L++A+ +I  MP + S +V+ SLL
Sbjct: 549 IDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EASVSVFASLL 607

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             CR H +  LGE  ++KL  L P++    V+LS
Sbjct: 608 GACRHHSDSALGEEMAKKLSELEPQDPTPFVILS 641



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 204/457 (44%), Gaps = 46/457 (10%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L  S  L+  L+ ++L TQ    ++K GF  DI+    L  MY K     + L+VF+
Sbjct: 97  PFLLKASAKLNSPLQGQILHTQ----LIKTGFHLDIYAATALADMYMKLHLLSYALKVFE 152

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           EM  RNL S  + +S   +NG F   L  +  +    F PN   + SV+  C S+   E 
Sbjct: 153 EMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIASVLPACASV---EL 209

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
              +HC A+K+ +E + +V  +V+  Y+  G++  A++VF  I   +V  +NA I G   
Sbjct: 210 DGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQ 269

Query: 224 CGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G      +V   +L   G   +  T ++ L  CS +     GRQIHGL+++ E+     
Sbjct: 270 NGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTM 329

Query: 283 IVNALIDMYIKS--------------------------SGM------DYAFKVFERMA-- 308
           +  AL+DMY K                           +GM      D A ++FE++   
Sbjct: 330 VGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPE 389

Query: 309 --DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
             + D  +WNT+  GFS+     +    FHK   +G   +  + + LLR C  L  L  G
Sbjct: 390 GLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSG 449

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNELLSGYC 424
            ++    +      +E ++++LI M+ +CG   +A  VF     K  +   WN ++SGY 
Sbjct: 450 KEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYG 509

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            N       + F  + E  V+ N  T   ++  C  +
Sbjct: 510 RNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHT 546



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 142/624 (22%), Positives = 258/624 (41%), Gaps = 68/624 (10%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           ++  + NG +   L +Y  + ++  + ++F    ++K    + +   G  +H   +K   
Sbjct: 65  IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 124

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             + +   ++ + Y KL  ++ A +VF  +   ++   N  I G++  GY  EAL     
Sbjct: 125 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 184

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           +       +  T  + L  C   A  ++  Q+H L I+  VE  I +  A++ MY     
Sbjct: 185 VGLGNFRPNSVTIASVLPAC---ASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGE 241

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLR 355
           +  A KVF+++ DK+V+S+N    G  +N  P     +F   +  SG  PN VT   +L 
Sbjct: 242 LVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILS 301

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNIT 414
            C KLL +  G Q+  L +      +  V ++L+ M+ +CG    A+ +F  +S  +N+ 
Sbjct: 302 ACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLV 361

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT-------------------FFY-- 453
           TWN +++G   N      ++ F  +   G+E +  T                   FF+  
Sbjct: 362 TWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKM 421

Query: 454 --------------VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
                         ++  C      Q   +IHG  I+T   +  +I ++LI  Y+  G  
Sbjct: 422 QSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGH- 480

Query: 500 DNSFEFSNGAERL---------DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
                 S  A R+         D A W AM+S     G    A  IF+ + E   +P+  
Sbjct: 481 ------SYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSA 534

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
            L +IL+ C+  G   R   +   + +  G N        ++D   + G +K A+    +
Sbjct: 535 TLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHE 594

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS----ACSHKG 665
                 V V+ +L+ A  HH   +   E+    KL+ L+P   T   ++S         G
Sbjct: 595 -MPEASVSVFASLLGACRHHSDSALGEEM--AKKLSELEPQDPTPFVILSNIYAVQGRWG 651

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDC 689
            V++     + M +  G++  P C
Sbjct: 652 DVER----VREMMNDRGLKKPPGC 671



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 39/298 (13%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA-ERNLVSWTLIVSAAI 121
           G Q+HG +VK+    D  +   L+ MYSKCG + W   +F E++  RNLV+W  +++  +
Sbjct: 312 GRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMM 371

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEF----------------------------------- 146
            NG+ D+ ++++  ++  G  P+                                     
Sbjct: 372 LNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLK 431

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--Y 204
           ++ S+++ C ++ A + G  IH   ++  I+ + F+  ++++ Y K G    A RVF  +
Sbjct: 432 SITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQF 491

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            I  DD   WNAMI GY   G    A  + + M  E +  +  T ++ L  CS   + D 
Sbjct: 492 QIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDR 551

Query: 265 GRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
           G Q+  ++ R   +  +      ++D+  +S  +  A ++   M +  V  + +L G 
Sbjct: 552 GWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPEASVSVFASLLGA 609



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 9/167 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVSWTLIVSAA 120
           G ++HGH ++     D F+   LI MY KCG+     RVF   ++   +   W  ++S  
Sbjct: 449 GKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGY 508

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKN 179
            +NG++    +++  M+     PN   + S++ VC   G  + G+ +  F +  R    N
Sbjct: 509 GRNGKYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQL--FKMMNRDYGLN 566

Query: 180 P---FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           P     GC V +   + G +  A+ + + +    V  + +++G   H
Sbjct: 567 PTSEHFGCMV-DLLGRSGRLKEAQELIHEMPEASVSVFASLLGACRH 612


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/582 (30%), Positives = 298/582 (51%), Gaps = 12/582 (2%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           V+  Y K G V  A  VF SI   +V  W  ++  YA  G+    L ++  M   G+  +
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS----IVNALIDMYIKSSGMDYAF 301
             T    +   S + D+D  R+IH    R+   C ++    +V ALIDMY K   + +A 
Sbjct: 182 AVTLATVIGAVSELGDWDEARKIHA---RAAATCQLTYDVVLVTALIDMYAKCGDIFHAE 238

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL- 360
            VF++  +KD+   N +   + +        S F++   SG +PN VT+++L R C    
Sbjct: 239 VVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNG 298

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           +  D  +   C  L      +  V ++L+ M+ RCG++E A  VFD +  KN+ TWN ++
Sbjct: 299 VYSDARVAHMCFIL-SKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMI 357

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY       + L+ + ++  +GVE +  TF  V+E+C  +E+      IH  ++  G+ 
Sbjct: 358 AGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYD 417

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNG-AERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           S   + S+LI  Y   G L ++ + F  G      + SW AM++AL   G    A+ +F 
Sbjct: 418 SSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFR 477

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G K +     + +++C++IGA     +I   VI  G+  +V + +++I+ Y KCG
Sbjct: 478 KMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCG 537

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A   F    +  +++ +NT++ A + +G  + + E+  +M L   QP++ T ++++
Sbjct: 538 RLDYALEVF-HHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNML 596

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
             CSH GLV K    F+SM   + + P+ + YGCLVD+L R+G LE+ +  I   PF   
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ SLL  C IH + E G  A+ ++L L PKN + +VLLS
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLS 698



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 223/499 (44%), Gaps = 3/499 (0%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F+ D  L N ++  Y KCG       VF  +   N+ SWT++++A  QNG     L++  
Sbjct: 112 FSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKL 193
            M   G  PN   + +V+     +G  +    IH  A    ++  +  +  ++++ YAK 
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           GD+  AE VF    + D+ C NAMI  Y   GY  +A++  + +   G+  ++ T+    
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + C+    +   R  H   I S++   + +  AL+ MY +   ++ A +VF+RM  K+V+
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVV 351

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WN +  G+++     +   L+     +G  P+ +TF  +L  C     L  G  +    
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV 411

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDAD 431
           +  G+     V S+LI M+  CG++  A  VF     ++ ++ +W  +L+    N     
Sbjct: 412 VDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRS 471

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L  F  +   GV+ N  TF   ++ C           I   +I TG+     + +SLI 
Sbjct: 472 ALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLIN 531

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G+LD + E  +     ++ +W  +++A    G    +  +   +   G +P+E  
Sbjct: 532 LYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMT 591

Query: 552 LGTILNSCAAIGAYQRTKS 570
           L  +L  C+  G   +  S
Sbjct: 592 LLNMLFGCSHNGLVAKAVS 610



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 238/545 (43%), Gaps = 40/545 (7%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
            T D+ L   LI MY+KCG       VFD+   ++L     ++SA IQ G     +  + 
Sbjct: 214 LTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFN 273

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAKL 193
            ++ +G  PN+     + + C + G        H CF L  ++  +  V  ++++ Y++ 
Sbjct: 274 RIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILS-KLRPDVVVNTALVSMYSRC 332

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +  A RVF  +   +V  WN MI GYA  GY  EAL +  SM   G+  D+ TF+N L
Sbjct: 333 GSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVL 392

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKD 311
           + CSL      GR IH  ++ +  + S+++++ALI MY     +  A  VF +       
Sbjct: 393 ESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSS 452

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           VISW  +    + N       +LF K  L G + N VTF   +  C  +  L  G  +  
Sbjct: 453 VISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFE 512

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +  G+L +  + +SLI ++ +CG ++ A  VF ++S+KNI TWN +L+    N  +  
Sbjct: 513 RVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETL 572

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
             +    +   G + N  T   ++  C    +  +V +         +  C    S    
Sbjct: 573 SAELLQEMDLDGAQPNEMTLLNMLFGC---SHNGLVAKAVSYFRSMVYGHCLVPTSEHYG 629

Query: 492 SYVNF----GQLDNSFEF-SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
             V+     GQL+    F S+    LD   W +++ + V            HS VE G +
Sbjct: 630 CLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCV-----------IHSDVERGLR 678

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR-M 605
               +LG               K+  P+V+     + ++ A  ++DA      + G R M
Sbjct: 679 AARRVLGL------------DPKNASPYVLL----SNMFAAIGMLDAVKSLAKLAGERAM 722

Query: 606 AFDQS 610
             +QS
Sbjct: 723 KKEQS 727



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 5/211 (2%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE--MA 106
           +S SL+E+L +   G  +H H+V  G+ + + + + LI MYS CG  G  + VF +    
Sbjct: 393 ESCSLAEHLAA---GRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTT 449

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             +++SWT +++A  +NGE    L ++  M   G   N     S +  C S+GA   G++
Sbjct: 450 HSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHA 509

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           I    +      +  +G S++N Y K G +  A  VF+ +S  ++  WN ++   +  G 
Sbjct: 510 IFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGE 569

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS 257
              +  ++  M  +G   ++ T +N L GCS
Sbjct: 570 ETLSAELLQEMDLDGAQPNEMTLLNMLFGCS 600



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 5/103 (4%)

Query: 62  LGTQVHGH-----IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +G  V GH     ++  G+  D+ L  +LI +Y KCG   + L VF  ++ +N+V+W  I
Sbjct: 501 IGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTI 560

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++A+ QNGE  +  ++  +M  +G  PNE  + +++  C   G
Sbjct: 561 LAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNG 603


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 186/663 (28%), Positives = 311/663 (46%), Gaps = 66/663 (9%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGC--WNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           +++ Y  +G ++ A  +       D G   WN++I  Y   G   + L +   M     T
Sbjct: 65  LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D YTF    + C  ++    G   H L + +    ++ + NAL+ MY +   +  A KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLD 362
           F+ M+  DV+SWN++   +++   P     +F +     G RP+++T   +L  C  L  
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             LG QL C A+    +    V + L+ M+ +CG ++ A++VF N+S K++ +WN +++G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304

Query: 423 YC-----------FNCCDADVLKTFCNIWE------------------------SGVEVN 447
           Y            F     + +K     W                         SG++ N
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIK-------TGFSSCGYICSSLIKSYVNFGQLD 500
             T   V+  C          +IH   IK        G      + + LI  Y    ++D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424

Query: 501 NS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG--EKPDEYILGTI 555
            +   F+  +  ER D+ +W  M+      G  ++A+ +   + E     +P+ + +   
Sbjct: 425 TARAMFDSLSPKER-DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +CA++ A +  K IH + ++   N   ++V++ +ID YAKCG I  AR+ FD     N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           +V  + +L+  Y  HG   EA+ IFD+M+    +    T + V+ ACSH G++D+G   F
Sbjct: 544 EV-TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             M + +G+ P P+ Y CLVD+L R G L  A  +IE MP +P P V+ + LS CRIHG 
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEGV-----CNVND 781
            ELGE+A+EK+  L   +D ++ LLS         +   R  +L+ H+GV     C+  +
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722

Query: 782 GIK 784
           GIK
Sbjct: 723 GIK 725



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 219/451 (48%), Gaps = 56/451 (12%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H   +  GF +++F+ N L+AMYS+C       +VFDEM+  ++VSW  I+ +  +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205

Query: 123 NGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            G+  + L+M+  M    G  P+   + +V+  C S+G    G  +HCFA+   + +N F
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM------------------------ 217
           VG  +++ YAK G +  A  VF ++S  DV  WNAM                        
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325

Query: 218 -----------IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
                      I GYA  G G+EAL V   ML  GI  ++ T I+ L GC+ V     G+
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385

Query: 267 QIHGLIIRSEVECSIS-------IVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNT 317
           +IH   I+  ++   +       ++N LIDMY K   +D A  +F+ ++  ++DV++W  
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445

Query: 318 LFGGFSENKNPGQTASLFHKFILSG--SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           + GG+S++ +  +   L  +       +RPN  T S  L  C  L  L +G Q+   AL 
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505

Query: 376 CGFLDEEN-----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
               +++N     V++ LI M+ +CG++  A  VFDN+  KN  TW  L++GY  +    
Sbjct: 506 ----NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + L  F  +   G +++G T   V+  C  S
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 162/684 (23%), Positives = 287/684 (41%), Gaps = 72/684 (10%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG---LRVFDEMAERNLVSWTLIVSAAIQ 122
           +H  ++  G    + L ++LI+ Y   G        LR F   ++  +  W  ++ +   
Sbjct: 47  IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPP-SDAGVYHWNSLIRSYGD 104

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L ++  M +  + P+ +    V K C  + +   G S H  +L      N FV
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-G 241
           G +++  Y++   ++ A +VF  +S  DV  WN++I  YA  G    AL + S M  E G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T +N L  C+ +    +G+Q+H   + SE+  ++ + N L+DMY K   MD A 
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK------------------------ 337
            VF  M+ KDV+SWN +  G+S+         LF K                        
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344

Query: 338 -----------FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-------GFL 379
                       + SG +PN VT   +L  C  +  L  G ++ C A+         G  
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNELLSGYCFNCCDADVLKTFC 437
           DE  V + LI M+ +C  V+ A ++FD++S K  ++ TW  ++ GY  +      L+   
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464

Query: 438 NIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYV 494
            ++E   +   N  T    +  C      ++  QIH   ++   ++   ++ + LI  Y 
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524

Query: 495 NFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
             G + D    F N   + +  +W ++M+     G+  EA+ IF  +   G K D   L 
Sbjct: 525 KCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583

Query: 554 TILNSCAAIGA-------YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            +L +C+  G        + R K++  F +  G   E Y  + ++D   + G +  A   
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTV--FGVSPG--PEHY--ACLVDLLGRAGRLNAALRL 637

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKG 665
            ++       +V+   +     HG V       +K+ +LA+      T +S + A + + 
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRW 697

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDC 689
              K     +S+    G++  P C
Sbjct: 698 ---KDVTRIRSLMRHKGVKKRPGC 718



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 171/375 (45%), Gaps = 47/375 (12%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I L   L    +L +  LG Q+H   V      ++F+ N L+ MY+KCG       
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK----------------------- 137
           VF  M+ +++VSW  +V+   Q G F+  ++++  M+                       
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345

Query: 138 ------------TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEKN---- 179
                       ++G  PNE  + SV+  C S+GA   G  IHC+A+K  I + KN    
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405

Query: 180 -PFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSS 236
              V   +++ YAK   V  A  +F S+S    DV  W  MIGGY+  G   +AL ++S 
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465

Query: 237 MLFEGITM--DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIK 293
           M  E      + +T   AL  C+ +A   IG+QIH   +R++     + + N LIDMY K
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  A  VF+ M  K+ ++W +L  G+  +    +   +F +    G + + VT  ++
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585

Query: 354 LRQCGKLLDLDLGLQ 368
           L  C     +D G++
Sbjct: 586 LYACSHSGMIDQGME 600



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 14/292 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-------GFTNDIFLQNNLIAMYS 90
           S ++ + + L   LS   ++ + + G ++H + +K        G  ++  + N LI MY+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418

Query: 91  KCGYFGWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEF 146
           KC        +FD ++  ER++V+WT+++    Q+G+ +  L++  +M  +     PN F
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVFYS 205
            +   +  C S+ A   G  IH +AL+ +    P FV   +++ YAK G ++ A  VF +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           + + +   W +++ GY   GYG EAL +   M   G  +D  T +  L  CS     D G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598

Query: 266 RQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISW 315
            +  + +     V         L+D+  ++  ++ A ++ E M  +   + W
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 175/640 (27%), Positives = 312/640 (48%), Gaps = 17/640 (2%)

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAK 192
           +D++             +++ C    A   G  IH  A+K  +   N  +G  +++ YA 
Sbjct: 32  LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
                 A+  F ++   ++  W  ++  +A  G   E L  +  M  +G+  D  TFI A
Sbjct: 92  CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKD 311
           L  C        G +IH +++ S +E    + NAL++MY K   + +A +VF +M   ++
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG-KLLDLDLGLQLQ 370
           VISW+ + G  + + N  +    F   +L G +        +L  C    L  D  L   
Sbjct: 212 VISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHS 271

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD--NVSYKNITTWNELLSGYCFNCC 428
           C+AL  GF  E  V ++++ M+ RCGAVE A  VFD  + + +++ +WN +LS Y  N  
Sbjct: 272 CIAL-SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDR 330

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             D ++ +  +    +  +  T+  ++  C  +E+  +   +H  I+         + ++
Sbjct: 331 GKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNA 387

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE--- 545
           L+  Y   G    +    +  E+  + SW  ++SA V +    EA  +F  ++E  +   
Sbjct: 388 LVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 447

Query: 546 ----KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               KPD     TILN+CA + A ++ K +       G +++  V +AV++ Y KCG+I+
Sbjct: 448 SQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 507

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             R  FD   +  DV ++N +I  YA  G   EA+++F +M++  ++P   +FVS++ AC
Sbjct: 508 EGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLAC 567

Query: 662 SHKGLVDKGCLLFKSMDSQY-GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           SH GL D+G   F SM ++Y  +  +   +GC+ D+L R G L++A+  +E +P +P   
Sbjct: 568 SHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAV 627

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + SLL+ CR H + +  +  + KLL L P+    +V LS
Sbjct: 628 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALS 667



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 157/605 (25%), Positives = 271/605 (44%), Gaps = 19/605 (3%)

Query: 63  GTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G ++H   VK      ++ L N++++MY+ C   G     FD + +RNL SWT +V+A  
Sbjct: 62  GRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFA 121

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +G+    L+    M+ +G  P+     + +  C    +   G  IH   +  R+E +P 
Sbjct: 122 ISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPK 181

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           V  ++LN Y K G ++ A+RVF  +  + +V  W+ M G +A  G  +EAL     ML  
Sbjct: 182 VSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLL 241

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI   K   +  L  CS  A    GR IH  I  S  E  + + NA++ MY +   ++ A
Sbjct: 242 GIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEA 301

Query: 301 FKVFERM--ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            KVF+ M  A +DV+SWN +   +  N        L+ +  L   R + VT+  LL  C 
Sbjct: 302 RKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQL---RADKVTYVSLLSACS 358

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
              D+ LG  L    ++        V ++L+ M+ +CG+   A +VFD +  ++I +W  
Sbjct: 359 SAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTT 418

Query: 419 LLSGYCFNCCDADVLKTFCNIWE-------SGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++S Y      A+    F  + E         V+ +   F  ++  C      +    + 
Sbjct: 419 IISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVS 478

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA-ERLDMASWGAMMSALVHQGHN 530
                 G SS   + ++++  Y   G+++      +G   R D+  W AM++     G +
Sbjct: 479 EQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQS 538

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--S 588
           HEA+ +F  +   G +PD +   +IL +C+  G   + KS    +     N    +    
Sbjct: 539 HEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFG 598

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            V D   + G +K A    ++     D + + +L+ A  +H  +  A E+ +  KL  L+
Sbjct: 599 CVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVAN--KLLRLE 656

Query: 649 PSQAT 653
           P  AT
Sbjct: 657 PRCAT 661



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 16/431 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +    +L    + +S   G ++H  +V      D  + N L+ MY KCG      
Sbjct: 141 VRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAK 200

Query: 100 RVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           RVF +M   RN++SW+++  A   +G     L+ +  M   G    + A+ +++  C S 
Sbjct: 201 RVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 260

Query: 159 GASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWN 215
              + G  IH C AL    E    V  +V+  Y + G V  A +VF ++     DV  WN
Sbjct: 261 ALVQDGRLIHSCIALS-GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWN 319

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            M+  Y H   G +A+ +   M       DK T+++ L  CS   D  +GR +H  I+  
Sbjct: 320 IMLSAYVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLSACSSAEDVGLGRVLHKQIVND 376

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           E+E ++ + NAL+ MY K      A  VF++M  + +ISW T+   +   +   +   LF
Sbjct: 377 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 436

Query: 336 HKFI---LSGS----RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            + +    +GS    +P+ + F  +L  C  +  L+ G  +   A  CG   ++ V +++
Sbjct: 437 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 496

Query: 389 IYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           + ++ +CG +E    +FD V S  ++  WN +++ Y       + LK F  +   GV  +
Sbjct: 497 VNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 556

Query: 448 GCTFFYVVETC 458
             +F  ++  C
Sbjct: 557 SFSFVSILLAC 567



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 144/311 (46%), Gaps = 11/311 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D +     LS   + +   LG  +H  IV      ++ + N L++MY+KCG      
Sbjct: 343 LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEAR 402

Query: 100 RVFDEMAERNLVSWTLIVSAAIQN---GEFDMGLKMYVDMKTNG----FMPNEFAVGSVM 152
            VFD+M +R+++SWT I+SA ++     E     +  ++++ NG      P+  A  +++
Sbjct: 403 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 462

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDV 211
             C  + A E G  +   A    +  +  VG +V+N Y K G++    R+F  + S  DV
Sbjct: 463 NACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDV 522

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI  YA  G   EAL +   M  EG+  D ++F++ L  CS     D G+     
Sbjct: 523 QLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTS 582

Query: 272 IIRS--EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNP 328
           +      V  +I     + D+  +   +  A +  E++  K D ++W +L      +++ 
Sbjct: 583 MTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDL 642

Query: 329 GQTASLFHKFI 339
            +   + +K +
Sbjct: 643 KRAKEVANKLL 653



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/307 (21%), Positives = 139/307 (45%), Gaps = 2/307 (0%)

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
           +D+     ++ +  V     T+  +++ C R++      +IH   +K        I  + 
Sbjct: 25  SDIASAVLDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNH 84

Query: 490 IKS-YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           I S Y +     ++    +  E+ ++ SW  +++A    G + E +     + + G +PD
Sbjct: 85  IVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 144

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                T L SC    + +    IH  V+      +  V++A+++ Y KCG +  A+  F 
Sbjct: 145 AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 204

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           +   + +VI ++ +  A+A HG V EA+  F  M L  ++ +++  V+++SACS   LV 
Sbjct: 205 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 264

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            G L+   + +  G +        ++ M  R G +E+A+ V + M       V  +++  
Sbjct: 265 DGRLIHSCI-ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 323

Query: 729 CRIHGNK 735
             +H ++
Sbjct: 324 AYVHNDR 330



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 1/132 (0%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S   ++ D +     L+   ++ +   G  V       G ++D  +   ++ +Y KCG  
Sbjct: 447 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 506

Query: 96  GWGLRVFDEMAERNLVS-WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
             G R+FD +  R  V  W  +++   Q G+    LK++  M+  G  P+ F+  S++  
Sbjct: 507 EEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 566

Query: 155 CVSMGASEFGYS 166
           C   G  + G S
Sbjct: 567 CSHTGLEDQGKS 578


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 269/503 (53%), Gaps = 12/503 (2%)

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H  +I++       +++ L+++Y K   M  A KVF+ +  ++V+ W TL  G+ +N  
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
           P     +F   + SGS P++ T SI L  C  L  + LG Q     +      + ++ ++
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L  ++ + G+++ +   F     K++ +W  ++S    N      L+ F  +    VE N
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   V+  C   ++  +  Q+H    K G  S   I +SL+  Y+  G +D +    N
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 508 GAERLDMASWGAMMSALVH-----------QGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
             E  ++ +W AM++               Q    EA+ ++  L  +G KPD + L +IL
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
             C+ + A ++ + IH   IK GF ++V V +A++D Y KCG I+ AR AF    ++  +
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAF-LDMSTRTL 360

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I + ++I ++A HG    A+++F+ M+LA  +P+Q TFV V++ACSH G+VD+    F+ 
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M  +Y ++P  D YGCLVDM  R G L++A  VI+ M  +P+  ++  L++GCR HGN+E
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480

Query: 737 LGEWASEKLLLLLPKNDAAHVLL 759
           LG +A+E+LL L P++   +V+L
Sbjct: 481 LGFYAAEQLLKLKPRSTETYVVL 503



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 222/453 (49%), Gaps = 16/453 (3%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH H++K G   + F+ + L+ +Y+KCG      +VFD +  RN+V WT +++  +QN +
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            ++ ++++ DM  +G  P+ F +   +  C S+ +   G   H F +K RI  +  +G +
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           + + Y+K G + ++ + F      DV  W  +I      G     L +   MLFE +  +
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            +T  + L  CS +   D+G Q+H L  +   E ++ I N+L+ +Y+K   +D A  +F 
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241

Query: 306 RMADKDVISWNTLFGG-----------FSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           RM  K++I+WN +  G           FS  +   +   ++ K   SG +P+  T S +L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C +L  L+ G Q+    +  GFL +  V ++L+ M+ +CG++E A   F ++S + + 
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIH 471
           +W  +++ +  +      L+ F ++  +G   N  TF  V+  C  +   +      +I 
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
               K       Y C  L+  +V  G+LD +F+
Sbjct: 422 QKEYKIKPVMDHYGC--LVDMFVRLGRLDEAFD 452



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 192/393 (48%), Gaps = 14/393 (3%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+ +L+   +L+S  LG Q H  I+K   ++D  + N L ++YSK G     ++ F E  
Sbjct: 84  LSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETG 143

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E++++SWT I+SA   NG   MGL+++++M      PN+F + SV+ +C ++ +S+ G  
Sbjct: 144 EKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQ 203

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-- 224
           +H  + K+  E N  +  S++  Y K G +  A+ +F  +   ++  WNAMI G+A    
Sbjct: 204 VHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMD 263

Query: 225 ---------GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
                      G EAL +   +   G   D +T  + L  CS +A  + G QIH   I+S
Sbjct: 264 LAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKS 323

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
                + +  AL+DMY K   ++ A K F  M+ + +ISW ++   F+ +        LF
Sbjct: 324 GFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLF 383

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
               L+G RPN +TF  +L  C     +D  L+  + +          +    L+ MF R
Sbjct: 384 EDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVR 443

Query: 395 CGAVEMAHSVFDNVSYK-NITTWNELLSGYCFN 426
            G ++ A  V   +  + N   W  L++G C N
Sbjct: 444 LGRLDEAFDVIKRMDVEPNEFIWLLLIAG-CRN 475



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 41  RKDPIF-LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           RK  +F L+  L++   L +   G Q+H   +K GF +D+ +   L+ MY KCG      
Sbjct: 290 RKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERAR 349

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F +M+ R L+SWT ++++  ++G+    L+++ DM+  GF PN+     V+  C   G
Sbjct: 350 KAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAG 409


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 169/624 (27%), Positives = 312/624 (50%), Gaps = 12/624 (1%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF---VGCSVLNFYAKLGDVAAAE 200
           ++ + G+V+++C  + + E G   H       + ++     +G  ++  Y K GD+  A 
Sbjct: 90  DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149

Query: 201 RVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           RVF  +    DV  W A++ GYA  G   E + +   M   G+  D YT    L+  + +
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              + G  +HGL+ +       ++ NAL+  Y KS+    A  VF+ M  +DVISWN++ 
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G + N    +   LF +  L G   +  T   +L  C +L  L LG  +   ++  GF+
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            + ++ + L+ M+  C      + +F N+  KN+ +W  +++ Y        V   F   
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLF--- 386

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVNF 496
            E G+E      F +          +++     +HG  I+ G      + ++L++ YV  
Sbjct: 387 QEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKC 446

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G ++ +    +G    DM SW  ++         +EA ++F  ++    +P+   +  IL
Sbjct: 447 GNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCIL 505

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            + A++ + +R + +H + ++ G+  + +VA+A+ID Y KCG +  AR  FD+  N N +
Sbjct: 506 PAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKN-L 564

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +  ++  Y  HG   +A+ +F++M+++ + P  A+F +++ ACSH GL D+G   F +
Sbjct: 565 ISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDA 624

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M  ++ ++P    Y C+VD+L   G L++A   I+ MP +P  +++ SLL GCRIH N +
Sbjct: 625 MRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVK 684

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           L E  +E++  L P+N   +VLL+
Sbjct: 685 LAEEVAERVFELEPENTGYYVLLA 708



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 222/446 (49%), Gaps = 6/446 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG + KLGF +   + N L+A Y+K       + VFD M  R+++SW  ++S    
Sbjct: 215 GEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTS 274

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG +D  ++++V M   G   +   + SV+  C  +     G  +H +++K        +
Sbjct: 275 NGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSL 334

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +L+ Y+   D  +  ++F ++   +V  W AMI  Y   G   +   +   M  EG 
Sbjct: 335 ANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGT 394

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +   +AL   +       G+ +HG  IR+ +E  +++ NAL++MY+K   M+ A  
Sbjct: 395 RPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKL 454

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ +  KD+ISWNTL GG+S N    +  SLF + +L   RPN VT + +L     L  
Sbjct: 455 IFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSS 513

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G ++   AL  G+L+++ V ++LI M+ +CGA+ +A  +FD +S KN+ +W  +++G
Sbjct: 514 LERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAG 573

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    D +  F  +  SG+  +  +F  ++  C  S  +    +   A+ K      
Sbjct: 574 YGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEP 633

Query: 483 G---YICSSLIKSYVNFGQLDNSFEF 505
               Y C  ++   +N G L  ++EF
Sbjct: 634 RLKHYTC--MVDLLINTGNLKEAYEF 657



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 256/593 (43%), Gaps = 23/593 (3%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS-WTLIVSAAIQNGEFDMGLKMYVDM 136
           D  L   L+ MY KCG      RVFDEM + + V  WT ++S   + G+   G+ ++  M
Sbjct: 128 DNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKM 187

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
              G  P+ + +  V+K    +G+ E G  +H    K+       VG +++ FYAK    
Sbjct: 188 HCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRT 247

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A  VF  +   DV  WN+MI G    G   +A+ +   M  EG  +D  T ++ L  C
Sbjct: 248 KDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPAC 307

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + +    +GR +HG  +++      S+ N L+DMY   S      K+F  M  K+V+SW 
Sbjct: 308 AELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWT 367

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +   ++      + A LF +  L G+RP+    +  L        L  G  +   A+  
Sbjct: 368 AMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRN 427

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G      VT++L+ M+ +CG +E A  +FD V  K++ +WN L+ GY  N    +    F
Sbjct: 428 GMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLF 487

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +    +  N  T   ++       + +   ++H   ++ G+    ++ ++LI  YV  
Sbjct: 488 TEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKC 546

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G L  +    +     ++ SW  M++     G   +A+ +F  +  +G  PD      IL
Sbjct: 547 GALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAIL 606

Query: 557 NSCAAIG----------AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            +C+  G          A ++   I P   +L   T       ++D     G++K A   
Sbjct: 607 YACSHSGLRDEGWRFFDAMRKEHKIEP---RLKHYT------CMVDLLINTGNLKEAYEF 657

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            D      D  ++ +L+     H  V  A E+ +  ++  L+P    +  +++
Sbjct: 658 IDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAE--RVFELEPENTGYYVLLA 708



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 157/296 (53%), Gaps = 1/296 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VHG+ VK GF +   L N L+ MYS C  +    ++F  M ++N+VSWT ++++  
Sbjct: 315 LGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYT 374

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + G +D    ++ +M   G  P+ FA+ S +         + G S+H +A++  +EK   
Sbjct: 375 RAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLA 434

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++  Y K G++  A+ +F  + S D+  WN +IGGY+      EA ++ + ML + 
Sbjct: 435 VTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ- 493

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T    L   + ++  + GR++H   +R        + NALIDMY+K   +  A 
Sbjct: 494 LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLAR 553

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           ++F+R+++K++ISW  +  G+  +       +LF +  +SG  P+  +FS +L  C
Sbjct: 554 RLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYAC 609


>gi|302753492|ref|XP_002960170.1| hypothetical protein SELMODRAFT_74627 [Selaginella moellendorffii]
 gi|300171109|gb|EFJ37709.1| hypothetical protein SELMODRAFT_74627 [Selaginella moellendorffii]
          Length = 876

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 193/721 (26%), Positives = 341/721 (47%), Gaps = 31/721 (4%)

Query: 66  VHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AIQN 123
           +HG + + G  T++I +   LI MY+ CG       VF  M  RN ++W+ +++A A   
Sbjct: 156 IHGLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVP 215

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G       ++  M+ +G +PNE    S++  C        G  IH  A K     +  VG
Sbjct: 216 GHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGRLIHEAADKYGYGSDVVVG 275

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVG--CWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            SVLN Y K GDV  A ++F  +         WN+++G Y        A+ + S M  EG
Sbjct: 276 NSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSLMQLEG 335

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI----SIVNALIDMYIKSSGM 297
           +  +K TF+ AL  C+ +A+   G+ +    +   VEC +     +  AL+ ++ K   +
Sbjct: 336 VIANKVTFLAALNACAGLAEMTAGKTV----VDCVVECGLFGDDLVKTALVSLFGKCGYL 391

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQ 356
           D A  V   +   D +SWN++   ++  +   Q     FH     G  P    F   L  
Sbjct: 392 DVAESVLGEILVPDSVSWNSIVAAYASQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALNA 451

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV--SYKNIT 414
           C  L  L  G  +  L    G ++  +V ++L+ M+ +CG +  A  +F ++   +++  
Sbjct: 452 CSNLGALKQGKLVHYLVRETG-VESTDVFTALVNMYGKCGELLTAREIFSSMPDEFRDAL 510

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN L++ +  +    + L  +  + + G       F  V+       +     +IH  +
Sbjct: 511 TWNGLINAHTQHGKPEEALSFYRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQV 570

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV--------- 525
            +        + + L+  Y   G +D ++E     +  D  +W +M+ A +         
Sbjct: 571 AECSLDLDSTVGTLLVNMYAKSGDVDTAWEIFERMQHSDTVTWNSMLGACIQQRPRSSEA 630

Query: 526 -HQGHNHEAVTI--FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV--IKLGF 580
            H+   +EAV +  F  ++  G + D   L T+L++CA+  +    K +H  V  + L  
Sbjct: 631 PHEQQENEAVVVRLFARMLLEGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSL 690

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN-DVIVYNTLIMAYAHHGLVSEAMEIF 639
            ++  + +A++  Y++CG  + ++  F    + + D+I +N++I A A HG   +A+E+ 
Sbjct: 691 ESDTGLFNALVTMYSRCGSWEVSQAMFHAMGSCHGDLITWNSMITACARHGQALQAVELV 750

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
             M+ A   P + T   ++SACSH GL+DK    F+ M  +Y + P PD YG +VD+L R
Sbjct: 751 RGMEQAGWSPDKVTLTVILSACSHAGLLDKAYECFQLMRGEYEIDPGPDHYGSIVDLLCR 810

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G L +A+ +IE +P   S   +RSLL GC  HG+  LG  A+++L  + P++   +V+L
Sbjct: 811 AGKLGEAEALIEKLPDPASAVTWRSLLGGCSNHGDLVLGRRAADELFGMDPRHHTTYVML 870

Query: 760 S 760
           S
Sbjct: 871 S 871



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 181/730 (24%), Positives = 337/730 (46%), Gaps = 36/730 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   I + GF  +  L N+LI +Y + G        FD + E+N+VS+  +++A  QNG
Sbjct: 54  QLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDGIEEKNVVSFNAMITAYAQNG 113

Query: 125 EFDMG-LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE-KNPFV 182
               G       +  +  + N  +  SV+K C +    E  + IH    +  +   N  V
Sbjct: 114 HSRQGLGLFRKLLLLDSKVANIVSFISVIKSCCNERLEECRW-IHGLVDEAGLSTSNIVV 172

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-GYGFEALNVVSSMLFEG 241
           G +++N YA  G VA AE VF S+ S +   W+A+I  +A   G+  +  ++  +M   G
Sbjct: 173 GTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHAAVPGHACQIWDIFRAMENSG 232

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ TFI+ L  C++  D  +GR IH    +      + + N++++MY K   +D A 
Sbjct: 233 VVPNEVTFISMLSSCTVAEDLSVGRLIHEAADKYGYGSDVVVGNSVLNMYGKCGDVDRAR 292

Query: 302 KVFERMADKDV--ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           ++F+ M DK    ++WN+L G +++ +N      LF    L G   N VTF   L  C  
Sbjct: 293 QLFDEMGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSLMQLEGVIANKVTFLAALNACAG 352

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L ++  G  +    + CG   ++ V ++L+ +F +CG +++A SV   +   +  +WN +
Sbjct: 353 LAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEILVPDSVSWNSI 412

Query: 420 LSGYCFNCC-DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++ Y      D DVL+ F  +   G+      F   +  C      +    +H  + +TG
Sbjct: 413 VAAYASQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRETG 472

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
             S   + ++L+  Y   G+L  + E   S   E  D  +W  +++A    G   EA++ 
Sbjct: 473 VESTD-VFTALVNMYGKCGELLTAREIFSSMPDEFRDALTWNGLINAHTQHGKPEEALSF 531

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           +  + + G +P + +  ++LN+ AA+G+    + IH  V +   + +  V + +++ YAK
Sbjct: 532 YRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECSLDLDSTVGTLLVNMYAK 591

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMA----------YAHHGLVSEA--MEIFDKMKL 644
            GD+  A   F++    +D + +N+++ A            H    +EA  + +F +M L
Sbjct: 592 SGDVDTAWEIFER-MQHSDTVTWNSMLGACIQQRPRSSEAPHEQQENEAVVVRLFARMLL 650

Query: 645 ANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
             ++  + T ++++SAC SH  L     L     +    ++     +  LV M SR G  
Sbjct: 651 EGIRVDRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCGSW 710

Query: 704 EDAKHVIEIM-PFQPSPTVYRSLLSGCRIHGNK----------ELGEWASEKLLLLLPKN 752
           E ++ +   M         + S+++ C  HG            E   W+ +K+ L +  +
Sbjct: 711 EVSQAMFHAMGSCHGDLITWNSMITACARHGQALQAVELVRGMEQAGWSPDKVTLTVILS 770

Query: 753 DAAHV-LLSK 761
             +H  LL K
Sbjct: 771 ACSHAGLLDK 780



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 143/664 (21%), Positives = 288/664 (43%), Gaps = 66/664 (9%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I +  S +++E+L    +G  +H    K G+ +D+ + N+++ MY KCG      ++FDE
Sbjct: 241 ISMLSSCTVAEDLS---VGRLIHEAADKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDE 297

Query: 105 MAERNL--VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           M +++   V+W  ++ A  Q   F + ++++  M+  G + N+    + +  C  +    
Sbjct: 298 MGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSLMQLEGVIANKVTFLAALNACAGLAEMT 357

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G ++    ++  +  +  V  ++++ + K G +  AE V   I   D   WN+++  YA
Sbjct: 358 AGKTVVDCVVECGLFGDDLVKTALVSLFGKCGYLDVAESVLGEILVPDSVSWNSIVAAYA 417

Query: 223 -HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G+  + L     M   G+  +   F+ AL  CS +     G+ +H L+  + VE S 
Sbjct: 418 SQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALNACSNLGALKQGKLVHYLVRETGVE-ST 476

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +  AL++MY K   +  A ++F  M D  +D ++WN L    +++  P +  S + +  
Sbjct: 477 DVFTALVNMYGKCGELLTAREIFSSMPDEFRDALTWNGLINAHTQHGKPEEALSFYRRMQ 536

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G+RP    F  +L     L     G ++      C    +  V + L+ M+ + G V+
Sbjct: 537 QEGTRPRKSVFVSVLNAVAALGSSVEGRRIHEQVAECSLDLDSTVGTLLVNMYAKSGDVD 596

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNC-------------CDADVLKTFCNIWESGVEV 446
            A  +F+ + + +  TWN +L G C                 +A V++ F  +   G+ V
Sbjct: 597 TAWEIFERMQHSDTVTWNSML-GACIQQRPRSSEAPHEQQENEAVVVRLFARMLLEGIRV 655

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS--SCGYICSSLIKSYVNFG--QLDNS 502
           +  T   ++  C    +     ++HG + +   S  S   + ++L+  Y   G  ++  +
Sbjct: 656 DRVTLLTMLSACASHASLSHGKKLHGLVSELNLSLESDTGLFNALVTMYSRCGSWEVSQA 715

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
              + G+   D+ +W +M++A    G   +AV +   + +AG  PD+  L  IL++C+  
Sbjct: 716 MFHAMGSCHGDLITWNSMITACARHGQALQAVELVRGMEQAGWSPDKVTLTVILSACSHA 775

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           G                          ++D   +C  +       D   +      Y ++
Sbjct: 776 G--------------------------LLDKAYECFQLMRGEYEIDPGPDH-----YGSI 804

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +      G + EA  + +K+      P+ A T+ S++  CS+ G +  G    ++ D  +
Sbjct: 805 VDLLCRAGKLGEAEALIEKLP----DPASAVTWRSLLGGCSNHGDLVLG---RRAADELF 857

Query: 682 GMQP 685
           GM P
Sbjct: 858 GMDP 861



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 149/595 (25%), Positives = 270/595 (45%), Gaps = 19/595 (3%)

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
           +    +++ C   G+      +     +     N  +G  ++N Y +LG V  A   F  
Sbjct: 34  YGFAGLIQACSRSGSPRAAKQLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAAFDG 93

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEA-LNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
           I   +V  +NAMI  YA  G+  +        +L +    +  +FI+ ++ C      + 
Sbjct: 94  IEEKNVVSFNAMITAYAQNGHSRQGLGLFRKLLLLDSKVANIVSFISVIKSCC-NERLEE 152

Query: 265 GRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            R IHGL+  + +  S I +  ALI+MY     +  A  VF  M  ++ I+W+ L    +
Sbjct: 153 CRWIHGLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEITWSALIAAHA 212

Query: 324 ENKNPG---QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
               PG   Q   +F     SG  PN VTF  +L  C    DL +G  +   A   G+  
Sbjct: 213 --AVPGHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVGRLIHEAADKYGYGS 270

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT--TWNELLSGYCFNCCDADVLKTFCN 438
           +  V +S++ M+ +CG V+ A  +FD +  K+     WN L+  Y         ++ F  
Sbjct: 271 DVVVGNSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYTQTRNFVLAVELFSL 330

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV  N  TF   +  C           +   +++ G      + ++L+  +   G 
Sbjct: 331 MQLEGVIANKVTFLAALNACAGLAEMTAGKTVVDCVVECGLFGDDLVKTALVSLFGKCGY 390

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALV-HQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           LD +          D  SW ++++A    QGH+ + +  FH +   G  P++ +    LN
Sbjct: 391 LDVAESVLGEILVPDSVSWNSIVAAYASQQGHDQDVLRGFHLMHSHGLIPEDGVFVAALN 450

Query: 558 SCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS-ND 615
           +C+ +GA ++ K +H  V + G  +T+V+  +A+++ Y KCG++  AR  F    +   D
Sbjct: 451 ACSNLGALKQGKLVHYLVRETGVESTDVF--TALVNMYGKCGELLTAREIFSSMPDEFRD 508

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
            + +N LI A+  HG   EA+  + +M+    +P ++ FVSV++A +  G   +G  + +
Sbjct: 509 ALTWNGLINAHTQHGKPEEALSFYRRMQQEGTRPRKSVFVSVLNAVAALGSSVEGRRIHE 568

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV-YRSLLSGC 729
            + ++  +         LV+M +++G ++ A  + E M  Q S TV + S+L  C
Sbjct: 569 QV-AECSLDLDSTVGTLLVNMYAKSGDVDTAWEIFERM--QHSDTVTWNSMLGAC 620



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 241/514 (46%), Gaps = 39/514 (7%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D Y F   +Q CS        +Q+   I R     + S+ N LI++Y +   +  A   
Sbjct: 31  IDVYGFAGLIQACSRSGSPRAAKQLEAEITRRGFRGNKSLGNHLINLYGRLGCVRDAAAA 90

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTF-SILLRQCGKLL 361
           F+ + +K+V+S+N +   +++N +  Q   LF K +L  S+  N V+F S++   C + L
Sbjct: 91  FDGIEEKNVVSFNAMITAYAQNGHSRQGLGLFRKLLLLDSKVANIVSFISVIKSCCNERL 150

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSS-------LIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           +       +C  +H G +DE  +++S       LI M+  CG+V  A +VF ++  +N  
Sbjct: 151 E-------ECRWIH-GLVDEAGLSTSNIVVGTALINMYAVCGSVADAEAVFGSMESRNEI 202

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWE-------SGVEVNGCTFFYVVETCCRSENQQMV 467
           TW+ L++ +      A V    C IW+       SGV  N  TF  ++ +C  +E+  + 
Sbjct: 203 TWSALIAAH------AAVPGHACQIWDIFRAMENSGVVPNEVTFISMLSSCTVAEDLSVG 256

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALV 525
             IH A  K G+ S   + +S++  Y   G +D + +  +  G +     +W ++M A  
Sbjct: 257 RLIHEAADKYGYGSDVVVGNSVLNMYGKCGDVDRARQLFDEMGDKHAAPVAWNSLMGAYT 316

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
              +   AV +F  +   G   ++      LN+CA +      K++   V++ G   +  
Sbjct: 317 QTRNFVLAVELFSLMQLEGVIANKVTFLAALNACAGLAEMTAGKTVVDCVVECGLFGDDL 376

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA-HHGLVSEAMEIFDKMKL 644
           V +A++  + KCG +  A     +     D + +N+++ AYA   G   + +  F  M  
Sbjct: 377 VKTALVSLFGKCGYLDVAESVLGEIL-VPDSVSWNSIVAAYASQQGHDQDVLRGFHLMHS 435

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             L P    FV+ ++ACS+ G + +G L+   +  + G++ S D +  LV+M  + G L 
Sbjct: 436 HGLIPEDGVFVAALNACSNLGALKQGKLVHY-LVRETGVE-STDVFTALVNMYGKCGELL 493

Query: 705 DAKHVIEIMP--FQPSPTVYRSLLSGCRIHGNKE 736
            A+ +   MP  F+ + T +  L++    HG  E
Sbjct: 494 TAREIFSSMPDEFRDALT-WNGLINAHTQHGKPE 526


>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
 gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
          Length = 571

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 170/553 (30%), Positives = 282/553 (50%), Gaps = 18/553 (3%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           W AMI GYA  G    A+   + M    +  DK T++  L     + D + GR+IH  I 
Sbjct: 4   WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGA---IQDLEQGRRIHVRIQ 60

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
            +  +  + + NAL+ MY   S +  A +VFE M  +DV+SW ++    +   +      
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF +  L G+RPN +T   LL  C    D   G  +   A   G   +  V ++++ M  
Sbjct: 121 LFRRMQLQGTRPNRITLLELLAWCD---DPGEGAAIHERAFASGLRSDVPVCNAILNMHA 177

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + G  E A  +F+ +  +N  +W  +++         D L+ F ++ + GVE +   F  
Sbjct: 178 KAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFIT 237

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERL 512
           V+  C  +   +    IHG II+ G  S   + +++I++Y   G L  ++  F    ER 
Sbjct: 238 VINACSSAATARW---IHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERR 294

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D  SW  M+SA    G     V +F  ++  G + +E  L T++N+CA   A +  + +H
Sbjct: 295 DHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWVH 354

Query: 573 PFVIKLGFNTE---VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             VI  G+  E     VA+A++D Y KCG ++ A   F +     DV+ + ++I A A +
Sbjct: 355 DCVI--GYQLERSSSMVATALLDMYGKCGSLEVAARIFGE-LEQPDVVSWTSIIAATAQN 411

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM--DSQYGMQPSP 687
           G  S A  +F  M+L  ++P   TFVSV++ACSH G+VD G      +  D + G++ + 
Sbjct: 412 GDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKEFVTRLRKDHREGIELTL 471

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
           +  GC+VD+L+R G LE+A+ VI+ MPF+P+P V+ + L+GC+ + +   G+ A+ ++L 
Sbjct: 472 EHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKTYEDISRGQRAAAQILG 531

Query: 748 LLPKNDAAHVLLS 760
           L  K  AA + LS
Sbjct: 532 LDEKTTAAVIALS 544



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 8/398 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  I + G+  D+ + N L+ MY+ C       RVF+ M  R++VSWT I++A  +
Sbjct: 52  GRRIHVRIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANAR 111

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+F   + ++  M+  G  PN   +  ++  C   G    G +IH  A    +  +  V
Sbjct: 112 AGDFPAAMGLFRRMQLQGTRPNRITLLELLAWCDDPGE---GAAIHERAFASGLRSDVPV 168

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++LN +AK G    A  +F  +   +   W AM+      G   +AL +   M  +G+
Sbjct: 169 CNAILNMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGV 228

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D   FI  +  CS  A     R IHG IIR   +   ++ NA+I  Y +   +  A++
Sbjct: 229 EPDSIAFITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYR 285

Query: 303 VFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            F  + + +D +SW T+   F+E     +   LF + +L G R N VT   ++  C    
Sbjct: 286 TFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGAS 345

Query: 362 DLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +  G  +  C+  +        V ++L+ M+ +CG++E+A  +F  +   ++ +W  ++
Sbjct: 346 AIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSII 405

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +    N   +   + FC +   GV     TF  VV  C
Sbjct: 406 AATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAAC 443



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 174/375 (46%), Gaps = 27/375 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H      G  +D+ + N ++ M++K G F     +F+ M  RN VSWT +++A ++
Sbjct: 150 GAAIHERAFASGLRSDVPVCNAILNMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVR 209

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G  D  L+++ DM+ +G  P+  A  +V+  C S   + +   IH   ++   + +  V
Sbjct: 210 AGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSAATARW---IHGCIIRGGCDSDTAV 266

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             +++  YA+ G +  A R F  I    D   W  MI  +A  G     + +   ML EG
Sbjct: 267 SNAIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEG 326

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYA 300
           +  ++ T I  +  C+  +    GR +H  +I  ++E S S+V  AL+DMY K   ++ A
Sbjct: 327 VRANEVTLITVVNACAGASAIKEGRWVHDCVIGYQLERSSSMVATALLDMYGKCGSLEVA 386

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F  +   DV+SW ++    ++N +    A LF    L G RP  VTF  ++  C   
Sbjct: 387 ARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHA 446

Query: 361 LDLDLGLQ------------LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
             +DLG +            ++    HCG          ++ +  R G +E A  V D++
Sbjct: 447 GMVDLGKEFVTRLRKDHREGIELTLEHCG---------CIVDLLARAGRLEEAECVIDSM 497

Query: 409 SYKNI-TTWNELLSG 422
            +K     W   L+G
Sbjct: 498 PFKPTPAVWMAFLAG 512



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/428 (21%), Positives = 204/428 (47%), Gaps = 20/428 (4%)

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V+ W  +  G++++ +  +    F +   +   P+ +T+  +L   G + DL+ G ++  
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVL---GAIQDLEQGRRIHV 57

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
                G+  +  V ++L+ M+  C ++  A  VF+ + ++++ +W  +++          
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            +  F  +   G   N  T   ++  C   ++      IH     +G  S   +C++++ 
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELLAWC---DDPGEGAAIHERAFASGLRSDVPVCNAILN 174

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            +   G+ + + E        +  SW AMM+A+V  G + +A+ +F  + + G +PD   
Sbjct: 175 MHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIA 234

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
             T++N+C++       + IH  +I+ G +++  V++A+I AYA+CG +K A   F +  
Sbjct: 235 FITVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIK 291

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG- 670
              D + + T+I A+A  G +   +++F +M L  ++ ++ T ++V++AC+    + +G 
Sbjct: 292 ERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGR 351

Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
               C++   ++    M  +      L+DM  + G LE A  +   +  QP    + S++
Sbjct: 352 WVHDCVIGYQLERSSSMVAT-----ALLDMYGKCGSLEVAARIFGELE-QPDVVSWTSII 405

Query: 727 SGCRIHGN 734
           +    +G+
Sbjct: 406 AATAQNGD 413



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/507 (20%), Positives = 211/507 (41%), Gaps = 20/507 (3%)

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
           +V WT +++   ++G+F   ++ + +M+ N  +P++    +V+     +   E G  IH 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDL---EQGRRIHV 57

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
              +   + +  V  +++  YA    +A A RVF ++   DV  W ++I   A  G    
Sbjct: 58  RIQETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA 117

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           A+ +   M  +G   ++ T +  L  C    D   G  IH     S +   + + NA+++
Sbjct: 118 AMGLFRRMQLQGTRPNRITLLELLAWCD---DPGEGAAIHERAFASGLRSDVPVCNAILN 174

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           M+ K+   + A ++FERM  ++ +SW  +               LF      G  P+ + 
Sbjct: 175 MHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIA 234

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV- 408
           F  ++  C           +    +  G   +  V++++I  + RCG+++ A+  F  + 
Sbjct: 235 FITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIK 291

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             ++  +W  ++S +         ++ F  +   GV  N  T   VV  C  +   +   
Sbjct: 292 ERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGR 351

Query: 469 QIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            +H  +I      S   + ++L+  Y   G L+ +       E+ D+ SW ++++A    
Sbjct: 352 WVHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQN 411

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL------GFN 581
           G    A  +F ++   G +P +    +++ +C+  G     K    FV +L      G  
Sbjct: 412 GDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKE---FVTRLRKDHREGIE 468

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFD 608
             +     ++D  A+ G ++ A    D
Sbjct: 469 LTLEHCGCIVDLLARAGRLEEAECVID 495


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/639 (28%), Positives = 312/639 (48%), Gaps = 23/639 (3%)

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH F +         V  S++  Y K G    A  VF  +S  D+  WN ++ G+ 
Sbjct: 102 LGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFE 161

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD-----IGRQIHGLIIRSEV 277
                 +ALN    M   G+  D  T+  AL  C     +D      G Q+H L+++   
Sbjct: 162 KS---VDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGF 218

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN--PGQTASLF 335
            C + I NAL+ MY +  G+D A +VF  M  +D++SWN +  G+++       +   LF
Sbjct: 219 GCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLF 278

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
              +  G   +HV+ +  +  CG   +L+ G Q+  LA   G+     V + LI  + +C
Sbjct: 279 GNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKC 338

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
             +  A +VF ++S +N+ +W  L+S       + +V+  F  +   GV  N  TF  ++
Sbjct: 339 KVLRDAKAVFQDMSARNVVSWTTLIS-----IDEENVVSLFNAMRVDGVYPNDVTFIGLL 393

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                    +    +HG  +K+  SS   + +SLI  Y  F  +  S +           
Sbjct: 394 HAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTI 453

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--AYQRTKSIHP 573
           SW A++S     G   EA   F S ++   KP++Y  G++LN+ AA    + +  +  H 
Sbjct: 454 SWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDISLKHGQRCHS 512

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            +IKLG NT+ +VA A++D Y K G+I  ++  F+++        +  +I AYA HG   
Sbjct: 513 HLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQ-FSWTGMISAYARHGDYE 571

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
             M ++ +++         TF+SV++AC  KG+VD G ++F SM  ++ ++P+P+ Y  +
Sbjct: 572 SVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIM 631

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VDML R G L++A+ ++  +P  P  +V +SLL  C++HGN E+ E   + L+ + P + 
Sbjct: 632 VDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSS 691

Query: 754 AAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
             +VL++    ++ GN    E V  V  G++   +K E+
Sbjct: 692 GPYVLMANLYAEK-GNW---EKVAEVRKGMRGRGVKKEV 726



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 288/630 (45%), Gaps = 26/630 (4%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +LG Q+HG +V  GF + + + N+L+ MY K G F   L VF+ ++  ++VSW  I+S  
Sbjct: 101 ILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGF 160

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-----FGYSIHCFALKIR 175
            ++ +    L     M  NG + +     + +  C      +     FG  +H   +K  
Sbjct: 161 EKSVD---ALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCG 217

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--YGFEALNV 233
                F+G +++  Y++ G +  A RVF  ++  D+  WNAM+ GYA  G  YG EA+ +
Sbjct: 218 FGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLL 277

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             +M+ EG+ +D  +   A+  C    + + G+QIHGL  +      +++ N LI  Y K
Sbjct: 278 FGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSK 337

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  A  VF+ M+ ++V+SW TL     EN       SLF+   + G  PN VTF  L
Sbjct: 338 CKVLRDAKAVFQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGL 392

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L        +  GL +  L L      E+NV++SLI M+ +  +++ +  +F+ ++Y+  
Sbjct: 393 LHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGT 452

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV-GQ-IH 471
            +WN L+SGY  N    +   TF +  +  ++ N  TF  V+     +E+  +  GQ  H
Sbjct: 453 ISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDISLKHGQRCH 511

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             +IK G ++  ++  +L+  Y   G ++ S    N        SW  M+SA    G   
Sbjct: 512 SHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYE 571

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVAS 588
             ++++  +   G   D     ++L +C   G       I   ++K   +    E Y  S
Sbjct: 572 SVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHY--S 629

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            ++D   + G +  A     Q      + V  +L+ +   HG V  A  + D   L  + 
Sbjct: 630 IMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVD--SLIQMD 687

Query: 649 P-SQATFVSVMSACSHKGLVDKGCLLFKSM 677
           P S   +V + +  + KG  +K   + K M
Sbjct: 688 PGSSGPYVLMANLYAEKGNWEKVAEVRKGM 717



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 8/326 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L  ++S     K+   G Q+HG   KLG+   + + N LI+ YSKC        VF
Sbjct: 289 DHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVF 348

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            +M+ RN+VSWT ++S   +N      + ++  M+ +G  PN+     ++         +
Sbjct: 349 QDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVK 403

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H   LK  +     V  S++  YAK   +  ++++F  ++      WNA+I GYA
Sbjct: 404 EGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYA 463

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GRQIHGLIIRSEVECS 280
             G   EA     S + E I  ++YTF + L   +   D  +  G++ H  +I+  +   
Sbjct: 464 QNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTD 522

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             +  AL+DMY K   ++ + +VF    +K   SW  +   ++ + +     SL+ +   
Sbjct: 523 PFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIER 582

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
            GS  + +TF  +L  C +   +D+G
Sbjct: 583 EGSNLDSITFLSVLAACCRKGMVDVG 608



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 10/176 (5%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           NQ+   S L  + I  A+ +SL         G + H H++KLG   D F+   L+ MY K
Sbjct: 485 NQYTFGSVL--NAIAAAEDISLKH-------GQRCHSHLIKLGLNTDPFVAGALLDMYGK 535

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
            G      RVF+E  E+   SWT ++SA  ++G+++  + +Y +++  G   +     SV
Sbjct: 536 RGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSV 595

Query: 152 MKVCVSMGASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           +  C   G  + G+ I      K  IE  P     +++   ++G +  AE + + I
Sbjct: 596 LAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQI 651


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 175/706 (24%), Positives = 338/706 (47%), Gaps = 4/706 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           T +H H++  G  +D      LI  YS+ G       VF+     +   W +++   + +
Sbjct: 18  TLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWS 77

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                 + +Y  M       ++F   SV++ C   G  + G  +H   +K  ++ +  V 
Sbjct: 78  NFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVE 137

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+L  Y  LG ++ A++VF ++++ D+  W+++I  Y   G   E L +   ++ + + 
Sbjct: 138 TSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVE 197

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  T ++    C  +    + + +HG IIR  +E    + +AL+ MY +      A ++
Sbjct: 198 LDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERI 257

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F  M ++ + SW  +   ++ ++   Q   +F + +     PN VT   +L  C     L
Sbjct: 258 FSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLL 317

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  + C A+    LD++++  +LI  + + G +     V   +  +NI +WN L+S Y
Sbjct: 318 REGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVY 377

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + L  F  +   G   +  +    +  C       +  QIHG  IK       
Sbjct: 378 ASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILD-E 436

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ +SLI  Y   G +D ++   +  +   + +W +M+      G++ EA+ +F  +   
Sbjct: 437 FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLN 496

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
               +E    T + +C+ +G  ++ K +H  +I  G   ++++ +A+ID YAKCGD++ A
Sbjct: 497 CLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIA 556

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD S +   V+ ++ +I     HG +  A+ +F +M    ++P+  TF++++SACSH
Sbjct: 557 HRVFD-SMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSH 615

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V++G   F SM + + ++P+ + + C+VD+LSR G L++A  +I  MPF    +++ 
Sbjct: 616 SGYVEEGKFYFNSMKN-FEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWG 674

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGN 769
           +LL+GCRIH   ++     E+ LL +  +D  +  L       EGN
Sbjct: 675 ALLNGCRIHQRMDMIR-NIERDLLDMRTDDTGYYTLLSNIYAEEGN 719



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/542 (24%), Positives = 251/542 (46%), Gaps = 1/542 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG I+K G   D  ++ +L+ MY   G      +VFD M  R+LVSW+ I+S  +
Sbjct: 117 VGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYV 176

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NGE   GL+M+  + +     +   + S+   C  +G      S+H   ++ RIE    
Sbjct: 177 DNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGP 236

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  +++  Y++  D ++AER+F ++ +  +  W AMI  Y    +  +AL V   ML   
Sbjct: 237 LNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFK 296

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T +  L  C+       G+ +H   ++       S+  ALI+ Y +   + Y  
Sbjct: 297 VAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCE 356

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KV   +  +++ISWN L   ++      +   +F +    G  P+  + S  +  C  + 
Sbjct: 357 KVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVG 416

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG Q+   A+    LD E V +SLI M+ +CG V++A+ +FD +  K++  WN ++ 
Sbjct: 417 LLWLGHQIHGYAIKRHILD-EFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMIC 475

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+       + ++ F  ++ + +++N  TF   ++ C    + +    +H  +I  G   
Sbjct: 476 GFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKK 535

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +I ++LI  Y   G L  +    +      + SW AM+      G    A+++F  ++
Sbjct: 536 DLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMI 595

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +   KP++     IL++C+  G  +  K     +        +   + ++D  ++ GD+ 
Sbjct: 596 QREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLD 655

Query: 602 GA 603
            A
Sbjct: 656 EA 657



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 185/377 (49%), Gaps = 34/377 (9%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH + VK    +D  L   LI  Y++ G   +  +V   + +RN++SW +++S    
Sbjct: 320 GKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYAS 379

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G F   L ++V M+  G +P+ F++ S +  C ++G    G+ IH +A+K  I  + FV
Sbjct: 380 QGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHI-LDEFV 438

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ Y+K G V  A  +F  I S  V  WN+MI G++  G   EA+ +   M    +
Sbjct: 439 QNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCL 498

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            M++ TF+ A+Q CS +   + G+ +H  +I   V+  + I  ALIDMY K   +  A +
Sbjct: 499 DMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHR 558

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ M+++ V+SW+ + GG   + +     SLF + I    +PN +TF  +L  C     
Sbjct: 559 VFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACS---- 614

Query: 363 LDLGLQLQCLALHCGFLDEEN----------VTSSLIYMFC------RCGAVEMAHSVFD 406
                       H G+++E            V  +L +  C      R G ++ A+ + +
Sbjct: 615 ------------HSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIIN 662

Query: 407 NVSYK-NITTWNELLSG 422
           ++ +    + W  LL+G
Sbjct: 663 SMPFPAEASIWGALLNG 679


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 178/613 (29%), Positives = 301/613 (49%), Gaps = 16/613 (2%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H + +   + ++      +++ Y   G +  A  VF +I   D   W  +I  Y     
Sbjct: 24  MHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSE 83

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             + +   + M       D   F + L+ CS   +FD GR++H  I++     S  +   
Sbjct: 84  FRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSF-VFTG 142

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+DMY K   ++ +  VF+   D++V SW+++  G+ +N        LF++        N
Sbjct: 143 LVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEAN 202

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +T  IL+  C KL  L  G  L    + CG      + ++L+ ++ +CG V  A SVFD
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFD 262

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +   +I +W  ++ GY  N C  + LK F    +  V  N  T   V  +C +  N  +
Sbjct: 263 ELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNL 322

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFG-QLDNSFEFSNGAERLDMASWGAMMSALV 525
              IHG  IK G S    + +SL+  Y       D  + F   ++R D+ +W +++SA  
Sbjct: 323 GRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDR-DVVAWNSIISAFS 380

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEV 584
             G  +EA+ +FH +      PD   L ++L++CA++ A Q   S H + +K G  ++ V
Sbjct: 381 QNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNV 440

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           YV +A++  YAKCGD + AR+ FD   +    + ++ +I  Y   G    ++ IF  M  
Sbjct: 441 YVGTALLTFYAKCGDAESARVIFD-GMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLK 499

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           A L+P++  F S++SACSH G++ +G  LF  +   Y + PS   Y C+VD+L+R G L+
Sbjct: 500 AELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLK 559

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL----- 759
           +A   I+ MP QP  +++ + L GC +H   +LGE A +++L L P +   +VL+     
Sbjct: 560 EALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYA 619

Query: 760 -----SKRKRQRE 767
                SK K+ RE
Sbjct: 620 SDARWSKVKQVRE 632



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/677 (24%), Positives = 296/677 (43%), Gaps = 54/677 (7%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           PI      SL +N+ + +   ++H ++V  G T D+     L+++Y   G       VFD
Sbjct: 5   PILHNFFYSLCDNINTLM---EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFD 61

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +   + +SW +I+     N EF   +  Y  M+      +      V+K C      + 
Sbjct: 62  TIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDE 121

Query: 164 GYSIHCFALKIRIEKNP--FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           G  +HC  +K     NP  FV   +++ YAK G++  +  VF      +V  W++MI GY
Sbjct: 122 GRKVHCQIVKF---GNPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGY 178

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                  + L + + M  E I  ++ T    +  C  +     G+ +HG +I+  +E   
Sbjct: 179 VQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGS 238

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +V AL+D+Y K   +  A  VF+ +   D++SW  +  G+++N  P +   LF +    
Sbjct: 239 YLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQV 298

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
              PN VT + +   C +LL+L+LG  +  L++  G  D   VT+SL+  + +C     A
Sbjct: 299 AVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDA 357

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             VF+ +S +++  WN ++S +  N    + L+ F  +    V  +  T   V+  C   
Sbjct: 358 RYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASL 417

Query: 462 ENQQMVGQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
              Q+    H   +K G  SS  Y+ ++L+  Y   G  +++    +G ++    +W AM
Sbjct: 418 NALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAM 477

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--- 577
           +S    QG+   +++IF  +++A  KP+E I  +IL++C+  G       +   + +   
Sbjct: 478 ISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYN 537

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           L  +T+ Y  + ++D  A+ G +K                                EA++
Sbjct: 538 LVPSTKHY--TCMVDLLARAGRLK--------------------------------EALD 563

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV-DM 696
              KM    +QP  + F + +  C      D G L  K M     + P   CY  L+ ++
Sbjct: 564 FIQKMP---VQPDVSLFGAFLHGCGLHSRFDLGELAIKRM---LELHPGDACYYVLMCNL 617

Query: 697 LSRNGYLEDAKHVIEIM 713
            + +      K V E+M
Sbjct: 618 YASDARWSKVKQVRELM 634



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 231/479 (48%), Gaps = 6/479 (1%)

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           SL  + +   ++H  ++   +   +S    L+ +Y     +D A  VF+ +   D +SW 
Sbjct: 13  SLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWK 72

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +   +  N         +++  +     ++V FS +L+ C +  + D G ++ C  +  
Sbjct: 73  VIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKF 132

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G  D   V + L+ M+ +CG +E + SVFD    +N+ +W+ +++GY  N    D L  F
Sbjct: 133 GNPD-SFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLF 191

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             + E  +E N  T   +V  C +         +HG +IK G     Y+ ++L+  Y   
Sbjct: 192 NRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKC 251

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G + ++    +    +D+ SW AM+      G   EA+ +F    +    P++  + ++ 
Sbjct: 252 GVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVF 311

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           +SC+ +      +SIH   IKLG    + V ++++D YAKC   + AR  F ++ +  DV
Sbjct: 312 SSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQMNRDARYVF-ETISDRDV 369

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N++I A++ +G   EA+E+F +M++ ++ P   T VSV+SAC+    +  G   F +
Sbjct: 370 VAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGS-SFHA 428

Query: 677 MDSQYGMQPSPDCYG-CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
              + G+  S    G  L+   ++ G  E A+ + + M  Q S   + +++SG  I GN
Sbjct: 429 YAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMD-QKSTVTWSAMISGYGIQGN 486


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 172/602 (28%), Positives = 310/602 (51%), Gaps = 7/602 (1%)

Query: 164 GYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           G  +H   +KI  +    ++  +++ FYAK G +  A+ VF ++   +V  +N +I G +
Sbjct: 26  GQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLS 85

Query: 223 HCGYGFE--ALNVVSSMLFEGITMDKYTFINALQGCSLV--ADFDIGRQIHGLIIRSEVE 278
           H G       L +   M+   I  D +TF       +L    +FD  RQ+H L I++   
Sbjct: 86  HNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFD-ARQVHVLGIKTASI 144

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + + ++L++ Y K   +  A K+F+RM +++++SW T+  G++  +   +   +F   
Sbjct: 145 DDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLM 204

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
            L     N   F+ +L        +D G Q+ C+ +  G L+  +V ++L+ M+ +CG +
Sbjct: 205 RLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNL 264

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             +  +F+  S KN  TW+ L++GY         LK F  +  +G   +  T   V++ C
Sbjct: 265 NYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKAC 324

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                 +   Q HG ++K+G+ +  Y  ++L+  Y  FG   ++ +  +     D+  W 
Sbjct: 325 SDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWT 384

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           ++++  V  G N EA++++  +      P+E  + ++L +C+ + A ++ K IH   IK 
Sbjct: 385 SIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKY 444

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G   E+ + SA+   YAKCG ++   + F +     D++ +N +I   + +G   EA+E+
Sbjct: 445 GLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQ-RDIVSWNAMISGLSQNGHGREALEL 503

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F++M+L   +P   TFV+V+SACSH G+V +G   F  M  ++ + P  + Y C+VD+LS
Sbjct: 504 FEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLS 563

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L +AK  IE         ++R LL  CR H N ELG +A EKL+ L  +  +A+VL
Sbjct: 564 RAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVL 623

Query: 759 LS 760
           LS
Sbjct: 624 LS 625



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 148/578 (25%), Positives = 272/578 (47%), Gaps = 7/578 (1%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           KS   G  +H HI+K+ + +   +L NNLI  Y+KCG+      VF+ +  +N+VS+  +
Sbjct: 21  KSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCL 80

Query: 117 VSAAIQNGE--FDMGLKMYVDMKTNGFMPNEFAV-GSVMKVCVSMGASEFGYSIHCFALK 173
           +     NG    +  L+++  M  N  +P+     G      +++G +     +H   +K
Sbjct: 81  IHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIK 140

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
                + FVG S++NFY K+G V  A ++F  +   ++  W  MI GYA      EAL V
Sbjct: 141 TASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGV 200

Query: 234 VSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
              M L EG  ++++ F + L         D G+Q+H +++++ V   +S++NAL+ MY 
Sbjct: 201 FGLMRLVEG-NLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYA 259

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   ++Y+  +FE  +DK+ I+W+ L  G+S+  +  +   LF K   +G  P+  T   
Sbjct: 260 KCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVG 319

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+ C  +  ++ G Q     L  G+  +    ++L+ M+ + G    A   FD +   +
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD 379

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +  W  +++GY  N  + + L  +  +    +  N  T   V++ C      +   QIH 
Sbjct: 380 LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHA 439

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             IK G      I S+L   Y   G L+          + D+ SW AM+S L   GH  E
Sbjct: 440 RTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGRE 499

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVI 591
           A+ +F  +   G KPD     T+L++C+ +G  +R  +    +  +      V   + ++
Sbjct: 500 ALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMV 559

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
           D  ++ G +  A+   + +   + + ++  L+ A  +H
Sbjct: 560 DVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNH 597



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 212/436 (48%), Gaps = 15/436 (3%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +F A +L+L  N  +R    QVH   +K    +D+F+ ++L+  Y K G      ++FD 
Sbjct: 117 VFTAAALNLGCNFDAR----QVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDR 172

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M ERNLVSWT ++S           L ++  M+      NEF   SV+   V     + G
Sbjct: 173 MPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSG 232

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +HC  +K  + +   V  +++  YAK G++  +  +F   S  +   W+A+I GY+  
Sbjct: 233 KQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQA 292

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL + S M + G    ++T +  L+ CS VA  + G+Q HG +++S  E  I   
Sbjct: 293 GDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTA 352

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+DMY K      A K F+ + + D++ W ++  G+ +N    +  S++ +  +    
Sbjct: 353 TALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKIL 412

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN +T + +L+ C  L  L+ G Q+    +  G   E ++ S+L  M+ +CG++E    +
Sbjct: 413 PNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLI 472

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +  ++I +WN ++SG   N    + L+ F  +   G + +  TF  V+  C      
Sbjct: 473 FRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACS----- 527

Query: 465 QMVGQIHGAIIKTGFS 480
                 H  I+K G++
Sbjct: 528 ------HMGIVKRGWA 537



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 11/195 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + +A  L    NL +   G Q+H   +K G   ++ +++ L  MY+KCG    G+ +F
Sbjct: 414 NELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIF 473

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M +R++VSW  ++S   QNG     L+++ +M+  G  P+     +V+  C  MG  +
Sbjct: 474 RRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVK 533

Query: 163 FGYS-----IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC-WNA 216
            G++        F L  R+E      C V +  ++ G +  A+    S   D   C W  
Sbjct: 534 RGWAYFNMMFDEFCLVPRVEH---YACMV-DVLSRAGKLNEAKEFIESAIIDHGMCLWRI 589

Query: 217 MIGG-YAHCGYGFEA 230
           ++     HC Y   A
Sbjct: 590 LLPACRNHCNYELGA 604


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 182/624 (29%), Positives = 306/624 (49%), Gaps = 6/624 (0%)

Query: 142 MPNEFAVGS----VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           MP  F V +    +++ C+   +      IH   LK     +  V   +   Y     V 
Sbjct: 1   MPLRFEVKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVV 60

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A R+F  I +  V  WN +I  YA  G    A+++  SML  G+  +KYT+   L+ CS
Sbjct: 61  LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            +   + G +IH       +E  + +  AL+D Y K   +  A ++F  M+ +DV++WN 
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  G S          L  +    G  PN  T   +L   G+   L  G  L    +   
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRS 240

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           F +   V + L+ M+ +C  +  A  +FD +  +N  +W+ ++ GY  + C  + L+ F 
Sbjct: 241 FDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFD 300

Query: 438 N-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             I +  ++    T   V+  C +  +     ++H  IIK G      + ++L+  Y   
Sbjct: 301 QMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKC 360

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G +D++  F +     D  S+ A++S  V  G+   A++IF  +  +G  PD   +  +L
Sbjct: 361 GVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +C+ + A Q     H ++I  GF T+  + +A+ID Y+KCG I  AR  F++  + +D+
Sbjct: 421 PACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR-MDRHDI 479

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I+ Y  HGL  EA+ +F  +    L+P   TF+ ++S+CSH GLV +G L F +
Sbjct: 480 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA 539

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M   + + P  +   C+VD+L R G +++A H I  MPF+P   ++ +LLS CRIH N E
Sbjct: 540 MSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIE 599

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           LGE  S+K+  L P++    VLLS
Sbjct: 600 LGEEVSKKIQSLGPESTGNFVLLS 623



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 179/644 (27%), Positives = 298/644 (46%), Gaps = 24/644 (3%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS     ++H H +K     D  + + L  +Y  C       R+FDE+   +++ W  I+
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQII 81

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
            A   NG FD  + +Y  M   G  PN++    V+K C  + A E G  IH  A    +E
Sbjct: 82  RAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + FV  ++++FYAK G +  A+R+F S+S  DV  WNAMI G +  G   +A+ ++  M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EGI  +  T +  L           G+ +HG  +R   +  + +   L+DMY K   +
Sbjct: 202 QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCL 261

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQ 356
            YA K+F+ M  ++ +SW+ + GG+  +    +   LF + IL  +  P  VT   +LR 
Sbjct: 262 LYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRA 321

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C KL DL  G +L C  +  G + +  + ++L+ M+ +CG ++ A   FD ++ K+  ++
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSF 381

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + ++SG   N   A  L  F  +  SG++ +  T   V+  C      Q     HG +I 
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            GF++   IC++LI  Y   G++  + E  N  +R D+ SW AM+      G   EA+ +
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIG----------AYQRTKSIHPFVIKLGFNTEVYV 586
           FH L+  G KPD+     +L+SC+  G          A  R  SI P          +  
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP---------RMEH 552

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
              ++D   + G I  A           DV +++ L+ A   H  +    E+  K++  +
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ--S 610

Query: 647 LQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           L P S   FV + +  S  G  D    + +     +G++  P C
Sbjct: 611 LGPESTGNFVLLSNIYSAAGRWDDAAHI-RITQKDWGLKKIPGC 653



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 145/304 (47%), Gaps = 19/304 (6%)

Query: 37  DSFLRKD-----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           D  + KD     P+ L   L     L     G ++H +I+KLG   DI L N L++MY+K
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAK 359

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG     +R FDEM  ++ VS++ IVS  +QNG   + L ++  M+ +G  P+   +  V
Sbjct: 360 CGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGV 419

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  + A + G+  H + +      +  +  ++++ Y+K G ++ A  VF  +   D+
Sbjct: 420 LPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDI 264
             WNAMI GY   G G EAL +   +L  G+  D  TFI  L  CS   LV +    FD 
Sbjct: 480 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA 539

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFS 323
             +   ++ R E  C       ++D+  ++  +D A      M  + DV  W+ L     
Sbjct: 540 MSRDFSIVPRME-HCI-----CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593

Query: 324 ENKN 327
            +KN
Sbjct: 594 IHKN 597


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 164/573 (28%), Positives = 299/573 (52%), Gaps = 8/573 (1%)

Query: 192 KLGDVAA---AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
           KL D +A   A  +F+S+   D+  +N ++ G++       ++++ + +     ++ D +
Sbjct: 53  KLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNF 112

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T+  A+  CS      +   +H   I      ++ + +AL+D+Y K S + YA KVF+ M
Sbjct: 113 TYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGM 169

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            ++D + WNT+  G  +N     +  LF + +  G R +  T + +L    +L +L +G+
Sbjct: 170 PERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGM 229

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +QCLAL  GF   + V + LI ++ +CG V  A  +F  ++  ++  +N ++SG+  N 
Sbjct: 230 GIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANG 289

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                +K F  +  SG  V+  T   ++       +  +   IHG  +K+G      + +
Sbjct: 290 GTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVST 349

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +    Y    ++D +    + +    + +W AM+S     G    A+++F  +++    P
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +   + TIL++CA +G+    K +H  +        +YV++A++D YAKCG+I  A   F
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLF 469

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D S +  + + +NT+I  Y  HG   EA++++++M      PS  TF+SV+ ACSH GLV
Sbjct: 470 D-SMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLV 528

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
            +G  +F +M ++Y ++P  + Y C+VD+L R+G LE A   I+ MP +P P V+ +LL 
Sbjct: 529 GEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLG 588

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C IH + ++   ASE+L  L P +   +VLLS
Sbjct: 589 ACMIHKDTDIARLASERLFELDPGSVGYYVLLS 621



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/538 (24%), Positives = 245/538 (45%), Gaps = 36/538 (6%)

Query: 3   ILKRAFLFADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVL 62
           +L R F   D PS    ++      L  N     D+F        A +++   N K  +L
Sbjct: 80  VLVRGFSLNDSPS----SSISLYTHLRRNTNLSPDNFT------YAFAVAACSNDKHLML 129

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
              +H H +  G+ +++F+ + L+ +Y K     +  +VFD M ER+ V W  +++  ++
Sbjct: 130 ---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVK 186

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N  FD  ++++ +M  +G   +   V +V+     +   + G  I C ALKI      +V
Sbjct: 187 NCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV 246

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ Y+K GDV  A  +F  I+  D+  +NAMI G+   G    ++ +   +LF G 
Sbjct: 247 LTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE 306

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +   T +  +   S      +   IHG  ++S +  + ++  A   +Y K + +D A  
Sbjct: 307 RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARH 366

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+   +K V++WN +  G+++N +     SLF + + +   PN VT + +L  C +L  
Sbjct: 367 LFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGS 426

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +  L           V+++L+ M+ +CG +  A  +FD++S KN  TWN ++ G
Sbjct: 427 LSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ----IHGAIIKTG 478
           Y  +    + LK +  +   G   +  TF  V+  C  +    +VG+     H  + K  
Sbjct: 487 YGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHA---GLVGEGEEIFHNMVNK-- 541

Query: 479 FSSCGYICSSLIKSYV-------NFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQ 527
                Y    LI+ Y          GQL+ + EF          A WG ++ A ++H+
Sbjct: 542 -----YRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHK 594



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 208/468 (44%), Gaps = 7/468 (1%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           Q H   I +     ++ +  L       S   +A  +F  +   D+  +N L  GFS N 
Sbjct: 30  QTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLND 89

Query: 327 NPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
           +P  + SL+ H    +   P++ T++  +  C     L L   L   ++  G+     V 
Sbjct: 90  SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVG 146

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           S+L+ ++C+   V  A  VFD +  ++   WN +++G   NCC  D ++ F  +   GV 
Sbjct: 147 SALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           V+  T   V+      +  ++   I    +K GF  C Y+ + LI  Y   G ++ +   
Sbjct: 207 VDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLL 266

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
                R D+ ++ AM+S     G    +V +F  L+ +GE+     +  ++   +  G  
Sbjct: 267 FRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHL 326

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
               SIH F +K G      V++A    Y K  +I  AR  FD+S     V+ +N +I  
Sbjct: 327 HLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDES-PEKTVVAWNAMISG 385

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           Y  +G    A+ +F +M      P+  T  +++SAC+  G +  G  +   + S+  ++P
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSE-NLEP 444

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           +      LVDM ++ G + +A  + + M  + +   + +++ G  +HG
Sbjct: 445 NIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLHG 491


>gi|225457865|ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
           [Vitis vinifera]
          Length = 711

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 173/607 (28%), Positives = 311/607 (51%), Gaps = 36/607 (5%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K   +  A  +F  +   D G WNAMI  YA  G   +AL + S M   GI  ++ TF
Sbjct: 105 YGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITF 164

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L  C+ V    + +QIHGLI++     ++ + ++L+D+Y K   M  A ++F+ + +
Sbjct: 165 ASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN 224

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            + ISWN +   + E  N  +   +F K I +  RP + TFS  L  C  +  L  G+Q+
Sbjct: 225 PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQI 284

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN--C 427
             +A+  G+ ++E V+SSLI M+ +CG +E A  +F+  S KN+ +W  ++SGY  +   
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344

Query: 428 CDADVL-------------------KTFCNIWESGVE-----------VNGCTFFYVVET 457
            +A VL                     FC  WE  +E           ++  T   ++  
Sbjct: 345 REARVLFDEMPERSVISWNAMLAGYTHFCQ-WEEALEFVFLMRKATQDIDHVTVGLILNV 403

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMAS 516
           C    + +   Q+HG I + G  S  ++ ++L+  Y   G L ++   F   +   D  S
Sbjct: 404 CAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRIS 463

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W A++++    G + EA+TIF  + +    P ++ LGT+L++CA I A ++ K IH F+I
Sbjct: 464 WNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMI 522

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           + G+  +V    A++D Y+KC  ++ A   F ++  S D+I++N++I+   H+G   + +
Sbjct: 523 RNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA-PSRDLILWNSMILGCCHNGRGRDVL 581

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M+   ++P   TF  ++  C  +GL   G   F SM ++Y + P  + Y  ++++
Sbjct: 582 GLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIEL 641

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
             R+G++++ +  I+ MPF+P+  +   + + C  HG+  LG+WA+E+L  L P      
Sbjct: 642 YGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHF 701

Query: 757 VLLSKRK 763
            +L + +
Sbjct: 702 QILDRSR 708



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 150/638 (23%), Positives = 264/638 (41%), Gaps = 69/638 (10%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V   +V  H++       IFL N  I  Y KC        +F+EM +R+  SW  +++A 
Sbjct: 77  VEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAY 136

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G  +  L ++  M   G   NE    SV+  C ++ A      IH   +K     N 
Sbjct: 137 AQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNV 196

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +G S+++ Y K   ++ A R+F  I + +   WN ++  Y   G   EA+ +   M+  
Sbjct: 197 ILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRA 256

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I    +TF NAL  CS ++    G QIHG+ IR   +    + ++LIDMY K   ++ A
Sbjct: 257 NIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESA 316

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF----------ILSG-------- 342
            ++FE  + K++ISW ++  G++ +    +   LF +           +L+G        
Sbjct: 317 CRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWE 376

Query: 343 -------------SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
                           +HVT  ++L  C  L D++ G Q+       G      V ++L+
Sbjct: 377 EALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALL 436

Query: 390 YMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVN 447
           +M+ +CG +      F  +S +++  +WN LL+ +  +    + +  F  + WE+    +
Sbjct: 437 HMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET--TPS 494

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C      +   QIHG +I+ G+        +L+  Y     L+ + +   
Sbjct: 495 KFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFK 554

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
            A   D+  W +M+    H G   + + +F  + E G KPD      IL  C   G    
Sbjct: 555 EAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGL--- 611

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
                      G  TE +  +++ + Y     ++                 Y ++I  Y 
Sbjct: 612 ----------AGLGTEYF--NSMSNKYCIIPRLEH----------------YESMIELYG 643

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            HG + E  +   +M     +P+ A    V +ACS  G
Sbjct: 644 RHGFMDELEDFIKRMP---FEPTVAMLTRVFNACSEHG 678



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 223/496 (44%), Gaps = 34/496 (6%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R++   +I       I ++N  I+ Y K S +D A ++FE M  +D  SWN +   +++
Sbjct: 79  ARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQ 138

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
                +   LF +    G   N +TF+ +L  C  +L L L  Q+  L +  GF     +
Sbjct: 139 GGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVIL 198

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            SSL+ ++ +C  +  A  +FD +   N  +WN ++  Y     + + +  F  +  + +
Sbjct: 199 GSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANI 258

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
                TF   +  C      Q   QIHG  I+ G+     + SSLI  Y   G L+++  
Sbjct: 259 RPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACR 318

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE---------------------- 542
                   ++ SW +++S     G   EA  +F  + E                      
Sbjct: 319 IFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEA 378

Query: 543 ---------AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
                    A +  D   +G ILN CA +   +  K +H F+ + G  + ++V +A++  
Sbjct: 379 LEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHM 438

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y KCG+++  R+ F Q  +  D I +N L+ ++A HGL  EAM IF +M+     PS+ T
Sbjct: 439 YGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET-TPSKFT 497

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             +++SAC++   +++G  +   M  + G +      G LVDM S+   LE A  V +  
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFM-IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA 556

Query: 714 PFQPSPTVYRSLLSGC 729
           P +    ++ S++ GC
Sbjct: 557 PSR-DLILWNSMILGC 571



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   N+ +   G Q+HG +++ G+  D+  +  L+ MYSKC    + L+VF E  
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAP 557

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
            R+L+ W  ++     NG     L ++  M+  G  P+      ++  C+  G +  G
Sbjct: 558 SRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLG 615


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 166/615 (26%), Positives = 321/615 (52%), Gaps = 8/615 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD- 209
           +++  V+  + + G  +H   + + ++ + +V  ++++ Y        A+ VF  I +  
Sbjct: 9   LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68

Query: 210 DVGCWNAMIGGYA-HCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQ 267
           ++   N ++ GY  +C Y  EAL +   ++ +  +  D YT+ + L+ C  +    +G+ 
Sbjct: 69  EISLCNGLMAGYTRNCMYD-EALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQM 127

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           IH  +++  +   I + ++L+ MY K +  + A K+F+ M DKDV  WNT+   + ++  
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +    F      G  P+ VT +  +  C +LLDLD G ++    ++ GF  +  V+++
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ +CG +EMA  VF+ +  K +  WN +++GY F       ++ F  ++  GV+  
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307

Query: 448 GCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
             T    +  C +S  Q + G+ +HG II+       ++ SSL+  Y   G+++++    
Sbjct: 308 LTTLTSTLMACSQSA-QLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIF 366

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
               +    SW  M+S  V +G   +A+ +F  + ++  +PD     ++L +C+ + A +
Sbjct: 367 KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
           + + IH  +++        V  A++D YAKCG ++ A   F +     D++ + ++I AY
Sbjct: 427 KGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVF-KCLPERDLVSWTSMITAY 485

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             HG V EA+E+F +M  +N++P + TF++++SACSH GLVD G   F  M + YG+ P 
Sbjct: 486 GSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPR 545

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
            + Y CL+ +L R G L +A  +++  P       +  +L S CR+H N +LG   +E L
Sbjct: 546 IEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENL 605

Query: 746 LLLLPKNDAAHVLLS 760
           +   P + + +++LS
Sbjct: 606 IDKDPDDSSTYIILS 620



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/519 (26%), Positives = 239/519 (46%), Gaps = 2/519 (0%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   L  S N KS   G  +H  +V LG  ND+++  NLI++Y  C  F +   VFD + 
Sbjct: 6   LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65

Query: 107 ERNLVSW-TLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
               +S    +++   +N  +D  L ++   M      P+ +   SV+K C  +     G
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   +K  +  +  VG S++  YAK  +   A ++F  +   DV CWN +I  Y   
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL     M   G   D  T   A+  C+ + D D GR+IH  ++ S       + 
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVS 245

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+DMY K   ++ A +VFE+M +K V++WN++  G+    +      LF +    G +
Sbjct: 246 AALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVK 305

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P   T +  L  C +   L  G  +    +      +  + SSL+ ++ +CG VE A ++
Sbjct: 306 PTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETI 365

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +      +WN ++SGY       D L+ F  + +S VE +  TF  V+  C +    
Sbjct: 366 FKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAAL 425

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +   +IH  I++    +   +  +L+  Y   G ++ +F         D+ SW +M++A 
Sbjct: 426 EKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAY 485

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              G  +EA+ +F  ++++  KPD      IL++C+  G
Sbjct: 486 GSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAG 524



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/553 (25%), Positives = 254/553 (45%), Gaps = 20/553 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D       L     L+  VLG  +H  +VK G   DI + ++L+ MY+KC  F   +
Sbjct: 102 LKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAV 161

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++FDEM ++++  W  ++S   Q+G+F+  L+ +  M+  GF P+   + + +  C  + 
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH   +      + FV  ++++ Y K G +  A  VF  + +  V  WN+MI 
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G G   + +   M  EG+     T  + L  CS  A    G+ +HG IIR+ ++ 
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQP 341

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            I + ++L+D+Y K   ++ A  +F+ M     +SWN +  G+           LF +  
Sbjct: 342 DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMS 401

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            S   P+ +TF+ +L  C +L  L+ G ++  L +     + E V  +L+ M+ +CGAVE
Sbjct: 402 KSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVE 461

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  VF  +  +++ +W  +++ Y  +    + L+ F  + +S V+ +  TF  ++  C 
Sbjct: 462 EAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACS 521

Query: 460 RS--------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SNGA 509
            +           QM+  ++G I +    SC      LI      G+L  ++E   SN  
Sbjct: 522 HAGLVDDGLYHFNQMI-NVYGIIPRIEHYSC------LITLLGRAGRLHEAYEILQSNPE 574

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL-NSCAAIGAYQRT 568
              D      + SA     +    V I  +L++  + PD+     IL N  A+ G +   
Sbjct: 575 ISDDFQLLSTLFSACRLHKNLDLGVEIAENLID--KDPDDSSTYIILSNMYASFGKWDEV 632

Query: 569 KSIHPFVIKLGFN 581
           + +   +  LG  
Sbjct: 633 RMVRSKMKDLGLK 645



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S SF+  D I     L+    L +   G ++H  IV+    N+  +   L+ MY+KCG  
Sbjct: 401 SKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAV 460

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                VF  + ER+LVSWT +++A   +G     L+++ +M  +   P+     +++  C
Sbjct: 461 EEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSAC 520

Query: 156 -----VSMGASEFGYSIHCFALKIRIE 177
                V  G   F   I+ + +  RIE
Sbjct: 521 SHAGLVDDGLYHFNQMINVYGIIPRIE 547


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 163/523 (31%), Positives = 277/523 (52%), Gaps = 5/523 (0%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I   +   ++ L+ C+     D G Q+H  +++S    ++   N LIDMY K      A+
Sbjct: 2   IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF+ M +++V+SW+ L  G   N +   + SLF +    G  PN  TFS  L+ CG L 
Sbjct: 62  KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ GLQ+    L  GF     V +SL+ M+ +CG +  A  VF  +  +++ +WN +++
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTF-FYVVETCCRSENQQMVG-QIHGAIIKTGF 479
           G+      +  L TF  + E+ ++     F    +   C S      G QIHG ++++GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241

Query: 480 --SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
              S   I  SL+  YV  G L ++ +  +  +   M SW +++     +G   EA+ +F
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             L E   + D + L +I+   A     ++ K +    +KL    E  V ++V+D Y KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  A   F +     DVI +  +I  Y  HGL  +++ IF +M   N++P +  +++V
Sbjct: 362 GLVDEAEKCFAE-MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 420

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH G++ +G  LF  +   +G++P  + Y C+VD+L R G L++AKH+I+ MP +P
Sbjct: 421 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 480

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  ++++LLS CR+HG+ ELG+   + LL +  KN A +V++S
Sbjct: 481 NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 207/403 (51%), Gaps = 4/403 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH +++K G   ++   N LI MY KC       +VFD M ERN+VSW+ ++S  + 
Sbjct: 25  GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+    L ++ +M   G  PNEF   + +K C  + A E G  IH F LKI  E    V
Sbjct: 85  NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G S+++ Y+K G +  AE+VF  I    +  WNAMI G+ H GYG +AL+    M    I
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204

Query: 243 T--MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGMD 298
               D++T  + L+ CS       G+QIHG ++RS   C  S +I  +L+D+Y+K   + 
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A K F+++ +K +ISW++L  G+++     +   LF +     S+ +    S ++    
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               L  G Q+Q LA+      E +V +S++ M+ +CG V+ A   F  +  K++ +W  
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +++GY  +      ++ F  +    +E +   +  V+  C  S
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/508 (23%), Positives = 234/508 (46%), Gaps = 14/508 (2%)

Query: 141 FMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
            +PN+   + S+++VC   G S+ G  +HC+ LK     N      +++ Y K  +   A
Sbjct: 1   MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            +VF S+   +V  W+A++ G+   G    +L++ S M  +GI  +++TF   L+ C L+
Sbjct: 61  YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              + G QIHG  ++   E  + + N+L+DMY K   ++ A KVF R+ D+ +ISWN + 
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180

Query: 320 GGFSENKNPGQTASLFHKFILSG--SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
            GF       +    F     +    RP+  T + LL+ C     +  G Q+    +  G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240

Query: 378 F--LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
           F       +T SL+ ++ +CG +  A   FD +  K + +W+ L+ GY       + +  
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300

Query: 436 FCNIWESGVEVNGCTFFYVV----ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
           F  + E   +++      ++    +     + +QM  Q     + +G  +   + +S++ 
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM--QALAVKLPSGLETS--VLNSVVD 356

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y+  G +D + +     +  D+ SW  +++     G   ++V IF+ ++    +PDE  
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              +L++C+  G  +  + +   +++  G    V   + V+D   + G +K A+   D  
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
               +V ++ TL+     HG +    E+
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEV 504



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 10/162 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+    VKL    +  + N+++ MY KCG      + F EM  ++++SWT++++   +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VSMGASEFGYSIHCFALKIRIE 177
           +G     ++++ +M  +   P+E    +V+  C     +  G   F   +    +K R+E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
                 C V++   + G +  A+ +  ++    +VG W  ++
Sbjct: 452 ---HYAC-VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 183/652 (28%), Positives = 324/652 (49%), Gaps = 23/652 (3%)

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMK--TNGFMPN----EFAVGSVMKVCVSMGASEFGYSI 167
           T + S+++Q+ +  + +   +D +    GF P+     F VG+ +K        E   + 
Sbjct: 19  TFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLK------NGELSQAR 72

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
             F  +    KN      +++ Y K G++  A ++F  +       W  +IGGY+     
Sbjct: 73  QLF--EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQF 130

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL---IIRSEVECSISIV 284
            EA  +   M   G   D  TF+  L GC+     ++G QI  +   II+   +  + + 
Sbjct: 131 KEAFELFVQMQRCGTEPDYVTFVTLLSGCN---GHEMGNQITQVQTQIIKLGYDSRLIVG 187

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N L+D Y KS+ +D A ++F+ M + D +S+N +  G+S++    +  +LF +   SG +
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P   TF+ +L     L D+ LG Q+    +   F+    V+++L+  + +  +V  A  +
Sbjct: 248 PTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 307

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +  ++  ++N ++SGY ++         F  +  +  +     F  ++     + + 
Sbjct: 308 FDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDW 367

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSA 523
           +M  QIH   I T   S   + +SL+  Y   G+ + +   F+N   R     W AM+SA
Sbjct: 368 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR-SAVPWTAMISA 426

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            V +G   E + +F+ + +A    D+    ++L + A+I +    K +H F+IK GF + 
Sbjct: 427 YVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSN 486

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V+  SA++D YAKCG IK A   F Q     +++ +N +I AYA +G     ++ F +M 
Sbjct: 487 VFSGSALLDVYAKCGSIKDAVQTF-QEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMV 545

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           L+ LQP   +F+ V+SACSH GLV++G   F SM   Y + P  + Y  +VDML R+G  
Sbjct: 546 LSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRF 605

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
            +A+ ++  MP  P   ++ S+L+ CRIH N+EL   A+++L  +    DAA
Sbjct: 606 NEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAA 657



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 230/498 (46%), Gaps = 37/498 (7%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           TQV   I+KLG+ + + + N L+  Y K        ++F EM E + VS+  +++   ++
Sbjct: 169 TQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKD 228

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPF 181
           G  +  + ++V+M+ +G  P EF   +V+  C ++G  +   G  IH F +K     N F
Sbjct: 229 GLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVF 286

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++L+FY+K   V  A ++F  +   D   +N +I GYA  G    A ++   + F  
Sbjct: 287 VSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 346

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
               ++ F   L   S   D+++GRQIH   I +  +  I + N+L+DMY K    + A 
Sbjct: 347 FDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAE 406

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +  +  + W  +   + +     +   LF+K   +    +  TF+ LLR    + 
Sbjct: 407 MIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIA 466

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG QL    +  GF+      S+L+ ++ +CG+++ A   F  +  +NI +WN ++S
Sbjct: 467 SLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMIS 526

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  N      LK+F  +  SG++ +  +F  V+  C            H  +++ G   
Sbjct: 527 AYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS-----------HSGLVEEGL-- 573

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             +  +S+ + Y    +LD   E            + +++  L   G  +EA  +   + 
Sbjct: 574 --WHFNSMTQIY----KLDPRRE-----------HYASVVDMLCRSGRFNEAEKL---MA 613

Query: 542 EAGEKPDEYILGTILNSC 559
           E    PDE +  ++LN+C
Sbjct: 614 EMPIDPDEIMWSSVLNAC 631



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 225/481 (46%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +I+ Y K G  G   ++FD M ER  V+WT+++    Q  +F    +++V M+  G  
Sbjct: 87  NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+     +++  C           +    +K+  +    VG ++++ Y K   +  A ++
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   D   +NAMI GY+  G   +A+N+   M   G+   ++TF   L     + D 
Sbjct: 207 FKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDI 266

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +G+QIH  +I++    ++ + NAL+D Y K   +  A K+F+ M ++D +S+N +  G+
Sbjct: 267 VLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGY 326

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + +        LF +   +        F+ +L      LD ++G Q+    +      E 
Sbjct: 327 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEI 386

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V +SL+ M+ +CG  E A  +F N+++++   W  ++S Y       + L+ F  + ++
Sbjct: 387 LVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQA 446

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            V  +  TF  ++       +  +  Q+H  IIK+GF S  +  S+L+  Y   G + ++
Sbjct: 447 SVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDA 506

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +        ++ SW AM+SA    G     +  F  +V +G +PD      +L++C+  
Sbjct: 507 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 566

Query: 563 G 563
           G
Sbjct: 567 G 567



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/393 (24%), Positives = 183/393 (46%), Gaps = 5/393 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S L+      A  L  +  L   VLG Q+H  ++K  F  ++F+ N L+  YSK     
Sbjct: 243 NSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 302

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              ++FDEM E++ VS+ +I+S    +G+      ++ +++   F   +F   +++ +  
Sbjct: 303 DARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIAS 362

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           +    E G  IH   +    +    VG S+++ YAK G    AE +F +++      W A
Sbjct: 363 NTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTA 422

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI  Y   G+  E L + + M    +  D+ TF + L+  + +A   +G+Q+H  II+S 
Sbjct: 423 MISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSG 482

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
              ++   +AL+D+Y K   +  A + F+ M D++++SWN +   +++N     T   F 
Sbjct: 483 FMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFK 542

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGL-QLQCLALHCGFLDEENVTSSLIYMFCRC 395
           + +LSG +P+ V+F  +L  C     ++ GL     +             +S++ M CR 
Sbjct: 543 EMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRS 602

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           G    A  +   +        +E++     N C
Sbjct: 603 GRFNEAEKLMAEMPIDP----DEIMWSSVLNAC 631



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 15/298 (5%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           +F RK   F A  LS++ N     +G Q+H   +     ++I + N+L+ MY+KCG F  
Sbjct: 346 AFDRKQFPF-ATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEE 404

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              +F  +  R+ V WT ++SA +Q G ++ GL+++  M+    + ++    S+++   S
Sbjct: 405 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 464

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + +   G  +H F +K     N F G ++L+ YAK G +  A + F  +   ++  WNAM
Sbjct: 465 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAM 524

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHG 270
           I  YA  G     L     M+  G+  D  +F+  L  CS   LV +    F+   QI+ 
Sbjct: 525 ISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYK 584

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           L  R E   S+      +DM  +S   + A K+   M  D D I W+++      +KN
Sbjct: 585 LDPRREHYASV------VDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKN 636


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 167/577 (28%), Positives = 293/577 (50%), Gaps = 7/577 (1%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI--TMDKY 247
           YA  G +  A ++F  +    +  +N +I  Y   G   +A++V   M+ EG+    D Y
Sbjct: 59  YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T+    +    +    +G  +HG I+RS       + NAL+ MY+    ++ A  VF+ M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            ++DVISWNT+  G+  N        +F   +      +H T   +L  CG L DL++G 
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +  L       D+  V ++L+ M+ +CG ++ A  VFD +  +++ TW  +++GY  + 
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298

Query: 428 CDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
            D +     C + +  GV  N  T   +V  C  +        +HG  ++    S   I 
Sbjct: 299 -DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SLI  Y    ++D  F   +GA +     W A+++  V      +A+ +F  +     +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P+   L ++L + AA+   ++  +IH ++ K GF + +  A+ ++  Y+KCG ++ A   
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477

Query: 607 FD---QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           F+   +   S DV+++  LI  Y  HG    A+++F +M  + + P++ TF S ++ACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV++G  LF+ M   Y      + Y C+VD+L R G L++A ++I  +PF+P+ TV+ 
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ C  H N +LGE A+ KL  L P+N   +VLL+
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 271/572 (47%), Gaps = 24/572 (4%)

Query: 48  AKSLSLSENLKSRVL-GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            +S+S ++ L   V+ G +V GHI+           + L   Y+ CG+  +  ++F+EM 
Sbjct: 28  TQSISKTKALHCHVITGGRVSGHIL-----------STLSVTYALCGHITYARKLFEEMP 76

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFG 164
           + +L+S+ +++   ++ G +   + +++ M + G   +P+ +    V K    + + + G
Sbjct: 77  QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H   L+    ++ +V  ++L  Y   G V  A  VF  + + DV  WN MI GY   
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY  +AL +   M+ E + +D  T ++ L  C  + D ++GR +H L+    +   I + 
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NAL++MY+K   MD A  VF+RM  +DVI+W  +  G++E+ +      L       G R
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT + L+  CG  L ++ G  L   A+      +  + +SLI M+ +C  V++   V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F   S  +   W+ +++G   N   +D L  F  +    VE N  T   ++       + 
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER----LDMASWGAM 520
           +    IH  + KTGF S     + L+  Y   G L+++ +  NG +      D+  WGA+
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +S     G  H A+ +F  +V +G  P+E    + LN+C+  G  +   ++  F++    
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML---- 552

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
             E Y   A  + Y    D+ G     D+++N
Sbjct: 553 --EHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 240/547 (43%), Gaps = 16/547 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+AK+   +  LKS  LG  VHG I++  F  D ++QN L+AMY   G       VFD M
Sbjct: 122 FVAKA---AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R+++SW  ++S   +NG  +  L M+  M       +   + S++ VC  +   E G 
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H    + R+     V  +++N Y K G +  A  VF  +   DV  W  MI GY   G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
               AL +   M FEG+  +  T  + +  C      + G+ +HG  +R +V   I I  
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +LI MY K   +D  F+VF   +      W+ +  G  +N+       LF +       P
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           N  T + LL     L DL   + + C     GF+   +  + L++++ +CG +E AH +F
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478

Query: 406 DNVS----YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + +      K++  W  L+SGY  +    + L+ F  +  SGV  N  TF   +  C  S
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538

Query: 462 ---ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-W 517
              E    + +      KT   S  Y C  ++      G+LD ++           ++ W
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           GA+++A V   +        + L E   E    Y+L  + N  AA+G ++  + +   + 
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVL--LANIYAALGRWKDMEKVRSMME 654

Query: 577 KLGFNTE 583
            +G   +
Sbjct: 655 NVGLRKK 661



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 6/386 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   +   L +  +LK   +G  VH  + +    + I ++N L+ MY KCG       VF
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M  R++++WT +++   ++G+ +  L++   M+  G  PN   + S++ VC       
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H +A++ ++  +  +  S+++ YAK   V    RVF   S    G W+A+I G  
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 +AL +   M  E +  +  T  + L   + +AD      IH  + ++    S+ 
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456

Query: 283 IVNALIDMYIKSSGMDYAFKVF----ERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               L+ +Y K   ++ A K+F    E+   KDV+ W  L  G+  + +      +F + 
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGA 397
           + SG  PN +TF+  L  C     ++ GL L + +  H   L   N  + ++ +  R G 
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGR 576

Query: 398 VEMAHSVFDNVSYKNITT-WNELLSG 422
           ++ A+++   + ++  +T W  LL+ 
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAA 602



 Score = 46.2 bits (108), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++LN  AA  +  +TK++H  VI  G     ++ S +   YA CG I  AR  F++   S
Sbjct: 20  SLLNHFAATQSISKTKALHCHVIT-GGRVSGHILSTLSVTYALCGHITYARKLFEEMPQS 78

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ--PSQATFVSVMSACSHKGLVDKGC 671
           + ++ YN +I  Y   GL  +A+ +F +M    ++  P   T+  V  A      +  G 
Sbjct: 79  S-LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137

Query: 672 LLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           ++  + + S +G          L+ M    G +E A+ V ++M
Sbjct: 138 VVHGRILRSWFGRDKY--VQNALLAMYMNFGKVEMARDVFDVM 178


>gi|302799100|ref|XP_002981309.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
 gi|300150849|gb|EFJ17497.1| hypothetical protein SELMODRAFT_114322 [Selaginella moellendorffii]
          Length = 682

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 185/665 (27%), Positives = 320/665 (48%), Gaps = 26/665 (3%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           M+ KCG       +F  +   NL SWT+I++A  +NG     L +   M   G  P+   
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-GCSVLNFYAKLG--DVAAAE--RV 202
             +++ +C +    E G   H + L   +E +  V G +++N Y K    D+A A+  R+
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
            +     DV  WN+++  + H GY  EA  +   M  EGI     T    L+ CS   D 
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
             G+  H  ++   ++    ++N+L+ MY +   ++ +  VF  +  KD+ISWN +    
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237

Query: 323 SENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +   +  +   L  +  L G   P+ VTF  ++  C  L DLDL   +Q L    GF D+
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDD 297

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             + ++++ MF + G ++ A + FD +  KN+ +WN L+SGY  N      L+ F  + +
Sbjct: 298 LLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV+ N  TF  +++ C          ++H  I   G      + ++LI  Y    +L  
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQL 417

Query: 502 SFEF-----SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           + E      S G    D  +W A+ +A    GH  EA+ +F  + + G +  E    TIL
Sbjct: 418 AQELLERYQSTGLR--DSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFVTIL 475

Query: 557 NSC---AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++C   +++ A+ R+      + KL   T   +  A++  Y+KCG +  A  A  QS +S
Sbjct: 476 DACGDSSSLLAHGRS------IAKLSSWTSDAIKGALLGMYSKCGCVDDALAAL-QSLSS 528

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
             ++ + +++ AYAH G  SEA+ +  +M+   + P    F +V+ ACSH GL+ +  + 
Sbjct: 529 RGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVR 588

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
              +   YG       Y C+VD+L+R G L++A+ ++  MP++P    + +LL  C +HG
Sbjct: 589 LAWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHG 648

Query: 734 NKELG 738
           + E G
Sbjct: 649 DLERG 653



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/639 (23%), Positives = 278/639 (43%), Gaps = 49/639 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGL 99
           R D +     L L         G   H  I+  G  ++   L N LI MY KC       
Sbjct: 55  RPDVVCFVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLAR 114

Query: 100 RVFDEMAE----RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
             FD M      R++V+W  +++A   NG  +   +++ +M+  G  P+   +  V++ C
Sbjct: 115 AQFDRMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESC 174

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                   G   H   L + ++ + F+  S++  YA+ G +  +  VF +I   D+  WN
Sbjct: 175 ---SGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWN 231

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            MI   A  G   EA+ ++  +  EG    D+ TFI+ +  CS + D D+   I  L+  
Sbjct: 232 VMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSS 291

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           +  +  + + NA+++M+ KS  +D A   F+R+  K+V+SWN L  G+++N    +   L
Sbjct: 292 AGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLEL 351

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G + N VTF  LL  C  +  LD G +L       G      V ++LI M+ +
Sbjct: 352 FRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGK 411

Query: 395 CGAVEMAHSV---FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           C  +++A  +   + +   ++  TWN + + Y  N    + L+ F  + + GV     TF
Sbjct: 412 CQELQLAQELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATF 471

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             +++ C  S +    G+   +I K    +   I  +L+  Y   G +D++         
Sbjct: 472 VTILDACGDSSSLLAHGR---SIAKLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSS 528

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
             + +W +M++A  H G   EA+ +   +   G  PD+     ++ +C+  G       +
Sbjct: 529 RGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGL------L 582

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  +++L + +  Y            G   GA +             Y  ++   A  G 
Sbjct: 583 HEALVRLAWVSGDY------------GTAMGAGL-------------YECVVDVLARMGR 617

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
           + EA E+   M     +P    +++++ AC+  G +++G
Sbjct: 618 LQEAEELMHAMP---YEPDSLAWMALLGACTVHGDLERG 653



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 225/497 (45%), Gaps = 25/497 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++ LG   D FL N+L+ MY++CG       VF  + +++++SW +++S   +
Sbjct: 180 GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEAR 239

Query: 123 NGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            G  +  +++  ++   GF  P+E    SV+  C  +G  +  ++I         + +  
Sbjct: 240 LGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLL 299

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G +V+N + K G + AA   F  +   +V  WN +I GYA    G   L +   M  EG
Sbjct: 300 LGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEG 359

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF++ L  CS +   D GR++H  I  + +E    +  ALI+MY K   +  A 
Sbjct: 360 VKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCQELQLAQ 419

Query: 302 KVFERMAD---KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
           ++ ER      +D ++WN +   +++N +P +   LF +    G R    TF  +L  CG
Sbjct: 420 ELLERYQSTGLRDSVTWNAIAAAYAQNGHPLEALELFWRMQQQGVRAQEATFVTILDACG 479

Query: 359 KLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
                L  G  +  L+        + +  +L+ M+ +CG V+ A +   ++S + +  W 
Sbjct: 480 DSSSLLAHGRSIAKLS----SWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLLAWT 535

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +L+ Y      ++ L+    +   GV  +   F  VV  C  +      G +H A+++ 
Sbjct: 536 SMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHA------GLLHEALVRL 589

Query: 478 GFSSCGY-------ICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQG 528
            + S  Y       +   ++      G+L  + E  +      D  +W A++ A  VH  
Sbjct: 590 AWVSGDYGTAMGAGLYECVVDVLARMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGD 649

Query: 529 HNHEAVTIFH-SLVEAG 544
               A T  H +L+++G
Sbjct: 650 LERGARTAGHEALLDSG 666


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 177/593 (29%), Positives = 296/593 (49%), Gaps = 11/593 (1%)

Query: 173 KIRIEKNPFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           ++R E    V  C  L+   K G VA A  +F  +   +V  W + + G    G    A 
Sbjct: 21  RLRRETAEVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAG 80

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIVNALID 289
            + + M+  G+ ++ +    AL  C+         G Q+H L +R+       + + L++
Sbjct: 81  EMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVE 140

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           +Y +      A  V  RM   DV+++ +L      +   G  A    + +  G  PN  T
Sbjct: 141 LYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHT 200

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
            + +L  C  L+   LG+Q+    +   GF      +S+L+  + R G  +MA +VFDN+
Sbjct: 201 VTSILAACCPLV---LGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNL 257

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             KN+ TW  ++  +  +    D L+ F  +   GV       F +    C  E+  +  
Sbjct: 258 QCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC--ESIALGS 315

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q+H   IK G +S   + ++L+  Y   G +        G E  D+ SW A +SA    G
Sbjct: 316 QLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNG 375

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           H  +A+ +   +   G  P++Y   ++L+SCA +    + +  H   +KLG + +    +
Sbjct: 376 HGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGN 435

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+I+ Y+KCG I  AR+AFD   +  DV  +N+LI  +A HG V   ++ F +M     +
Sbjct: 436 ALINMYSKCGQIVPARLAFD-IMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGE 494

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKS-MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           P+++T + V++AC+H GLVD+G   F+S M   YG   +P  Y C+VDML R+G  +DA 
Sbjct: 495 PNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDAL 554

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +IE MPF+P   V+++LL+ CR+HGN E G  A+EKL+ L  ++ A++VL+S
Sbjct: 555 CLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMS 607



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 199/398 (50%), Gaps = 8/398 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + L+ +Y++CG       V   M   ++V++T +VSA  +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRIEKNPF 181
           +GEF M  +    M  +G MPNE  V S++  C  +     G  IH + +K +   ++ +
Sbjct: 176 SGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQIHGYMIKAMGFSQSVY 232

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ G+   A+ VF ++   +V  W  M+  +   G   +AL +   M+ EG
Sbjct: 233 TSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEG 292

Query: 242 I-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           + + +++ F  AL  C  +A   +G Q+H L I+  +   + + NAL+ MY +   +   
Sbjct: 293 VVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQL 349

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  + D D++SW      + +N +  +  +L  +    G  PN   FS +L  C  L
Sbjct: 350 EAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADL 409

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             LD G Q  CLAL  G   +    ++LI M+ +CG +  A   FD + ++++T+WN L+
Sbjct: 410 ALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLI 469

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            G+  +     VLK F  +  +G E N  T   V+  C
Sbjct: 470 HGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAAC 507



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 182/367 (49%), Gaps = 10/367 (2%)

Query: 61  VLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           VLG Q+HG+++K +GF+  ++  + L+  YS+ G F     VFD +  +N+V+W  ++  
Sbjct: 212 VLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQL 271

Query: 120 AIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
            I++G  +  L+++ +M + G + PNEFA    +  C S+     G  +H  A+K  +  
Sbjct: 272 HIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLAS 328

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  ++L+ Y ++G V   E +F  I   D+  W A I  Y   G+G +A+ ++S M 
Sbjct: 329 HLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMH 388

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            +G+T + Y F + L  C+ +A  D GRQ H L ++   +      NALI+MY K   + 
Sbjct: 389 SQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIV 448

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A   F+ M  +DV SWN+L  G +++         F +   +G  PN  T   +L  C 
Sbjct: 449 PARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACN 508

Query: 359 KLLDLDLGLQL---QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
               +D G+         L+  FL   +  + ++ M  R G  + A  + + + ++  + 
Sbjct: 509 HAGLVDEGVAFFRSAMAGLYGTFLTPPHY-ACMVDMLGRSGRFDDALCLIEEMPFEPGVL 567

Query: 415 TWNELLS 421
            W  LL+
Sbjct: 568 VWKTLLA 574



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 227/546 (41%), Gaps = 12/546 (2%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF--AV 148
           K G     L +FD M  +N+V+WT  VS   +NG  +   +M+ DM  +G   N+F    
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
                     GA   G  +H  A++     + +VG  ++  YA+ G   AAE V   + S
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            DV  + +++      G    A   +  M+  G+  +++T  + L  C  +    +G QI
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQI 217

Query: 269 HGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           HG +I++     S+   + L+D Y ++   D A  VF+ +  K+V++W T+      +  
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277

Query: 328 PGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           P     LF + I  G   PN   FSI L  C  +    LG QL  LA+  G      V++
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSN 334

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+ M+ R G V+   ++F  +   +I +W   +S Y  N      +     +   G+  
Sbjct: 335 ALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTP 394

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N   F  V+ +C          Q H   +K G        ++LI  Y   GQ+  +    
Sbjct: 395 NDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAF 454

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  +  D+ SW +++      G     +  F  +   G +P+E  L  +L +C   G   
Sbjct: 455 DIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVD 514

Query: 567 RTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
              +     +   + T +     + ++D   + G    A    ++      V+V+ TL+ 
Sbjct: 515 EGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574

Query: 625 AYAHHG 630
           +   HG
Sbjct: 575 SCRLHG 580



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 17/273 (6%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S  LG+Q+H   +K G  + + + N L++MY + G       +F  + + ++VSWT  +
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           SA  QNG  +  + +   M + G  PN++A  SV+  C  +   + G   HC ALK+  +
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
                G +++N Y+K G +  A   F  +   DV  WN++I G+A  G     L   S M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIG-----RQIHGL----IIRSEVECSISIVNALI 288
              G   ++ T +  L  C+     D G       + GL    +      C       ++
Sbjct: 489 CSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYAC-------MV 541

Query: 289 DMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           DM  +S   D A  + E M  +  V+ W TL  
Sbjct: 542 DMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 165/533 (30%), Positives = 279/533 (52%), Gaps = 38/533 (7%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ L++  + S    G  YA  VF+ + + +++ WNT+F G 
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  P+  TF  LL+ C K      G Q+    L  GF  + 
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFD------NVSY-------------------------K 411
            V +SLI M+ + G +E A  VFD       VSY                         K
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++ +WN ++SGY       + L+ F  +   + V  +  T   VV  C +S++ ++   +
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  I   GF+S   I ++LI  Y  FG+++ + E  +G    D+ SW  ++    H    
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVY-VA 587
            EA+ +F  ++ +GE P++  + +IL +CA +GA    + IH ++ K   G  T V  + 
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +++ID YAKCGDI  A+  FD S ++  +  +N +I  +A HG  + A +IF +M++  +
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P   TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L  +G  ++A+
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAE 484

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +I  MP +P   ++ SLL  C+IHGN ELGE  ++KL+ + P N  ++VLLS
Sbjct: 485 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLS 537



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 246/552 (44%), Gaps = 72/552 (13%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +H  ++K G  N  +  + L+       +F    + + VFD + E NL+ W  +      
Sbjct: 7   IHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHAL 66

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +    LK+Y+ M + G +P+ +    ++K C      + G  IH   LK+  + + +V
Sbjct: 67  SSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYV 126

Query: 183 GCSVLNFYAKLGD-------------------------------VAAAERVFYSISSDDV 211
             S+++ YA+ G                                + +A+++F  I   DV
Sbjct: 127 HTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDV 186

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLF-EGITMDKYTFINALQGCSLVADFDIGRQIHG 270
             WNAMI GY   G   EAL +   M+    +  D+ T +  +  C+     ++GR +H 
Sbjct: 187 VSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHS 246

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I       ++ IVNALID+Y K   ++ A ++F+ + +KDVISWNTL GG++      +
Sbjct: 247 WINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKE 306

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDEENVTSS 387
              LF + + SG  PN VT   +L  C  L  +D+G  +       L     +  ++ +S
Sbjct: 307 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTS 366

Query: 388 LIYMFCRCGAVEMAHSVFD-NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           LI M+ +CG ++ A  VFD ++S ++++TWN ++SG+  +         F  +  +G+E 
Sbjct: 367 LIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEP 426

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  TF  ++  C            H  ++  G +    I  S+ + Y    +L++     
Sbjct: 427 DDITFVGLLSACS-----------HSGMLDLGRN----IFRSMTRGYEITPKLEH----- 466

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                     +G M+  L H G   EA  + +++     +PD  I  ++L +C   G  +
Sbjct: 467 ----------YGCMIDLLGHSGLFKEAEEMINTM---PMEPDGVIWCSLLKACKIHGNLE 513

Query: 567 RTKSIHPFVIKL 578
             +S    +IK+
Sbjct: 514 LGESFAKKLIKI 525



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 173/357 (48%), Gaps = 39/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC------------- 92
           FL KS + S   K R  G Q+HGH++KLGF  DI++  +LI+MY++              
Sbjct: 94  FLLKSCAKS---KIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150

Query: 93  ------------------GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                             GY     ++FDE+  +++VSW  ++S  ++ G +   L+++ 
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210

Query: 135 D-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
           + M      P+E  + +V+  C    + E G  +H +        N  +  ++++ Y+K 
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF 270

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G+V  A  +F  + + DV  WN +IGGY H     EAL +   ML  G T +  T ++ L
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 330

Query: 254 QGCSLVADFDIGRQIHGLI---IRSEVECSISIVNALIDMYIKSSGMDYAFKVFE-RMAD 309
             C+ +   DIGR IH  I   ++  V    S+  +LIDMY K   +D A +VF+  M++
Sbjct: 331 PACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN 390

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           + + +WN +  GF+ +        +F +  ++G  P+ +TF  LL  C     LDLG
Sbjct: 391 RSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLG 447



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 135/286 (47%), Gaps = 6/286 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   +S      S  LG  VH  I   GF +++ + N LI +YSK G      
Sbjct: 218 VRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETAC 277

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++++SW  ++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 278 ELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 337

Query: 160 ASEFGYSIHCF---ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-YSISSDDVGCWN 215
           A + G  IH +    LK  +     +  S+++ YAK GD+ AA++VF  S+S+  +  WN
Sbjct: 338 AIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           AMI G+A  G    A ++ S M   GI  D  TF+  L  CS     D+GR I   + R 
Sbjct: 398 AMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG 457

Query: 276 -EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
            E+   +     +ID+   S     A ++   M  + D + W +L 
Sbjct: 458 YEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLL 503



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 121/275 (44%), Gaps = 37/275 (13%)

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYV---NFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           V  IH  +IKTG  +  Y  S L++  V   +F     +    +  +  ++  W  M   
Sbjct: 4   VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRG 63

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                    A+ ++  ++  G  PD Y    +L SCA     +  + IH  V+KLGF+ +
Sbjct: 64  HALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLD 123

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-- 641
           +YV +++I  YA+ G ++ AR  FD S +  DV+ Y  LI  Y   G +  A ++FD+  
Sbjct: 124 IYVHTSLISMYAQNGRLEDARKVFDIS-SHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182

Query: 642 ------------------------------MKLANLQPSQATFVSVMSACSHKGLVDKGC 671
                                         M + N++P ++T V+V+SAC+    ++ G 
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            +  S  + +G   +      L+D+ S+ G +E A
Sbjct: 243 HV-HSWINDHGFASNLKIVNALIDLYSKFGEVETA 276


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 177/593 (29%), Positives = 296/593 (49%), Gaps = 11/593 (1%)

Query: 173 KIRIEKNPFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           ++R E    V  C  L+   K G VA A  +F  +   +V  W + + G    G    A 
Sbjct: 21  RLRRETAEVVRDCKRLDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAG 80

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIVNALID 289
            + + M+  G+ ++ +    AL  C+         G Q+H L +R+       + + L++
Sbjct: 81  EMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVE 140

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           +Y +      A  V  RM   DV+++ +L      +   G  A    + +  G  PN  T
Sbjct: 141 LYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHT 200

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
            + +L  C  L+   LG+Q+    +   GF      +S+L+  + R G  +MA +VFDN+
Sbjct: 201 VTSILAACCPLV---LGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNL 257

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             KN+ TW  ++  +  +    D L+ F  +   GV       F +    C  E+  +  
Sbjct: 258 QCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGAC--ESIALGS 315

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q+H   IK G +S   + ++L+  Y   G +        G E  D+ SW A +SA    G
Sbjct: 316 QLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNG 375

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
           H  +A+ +   +   G  P++Y   ++L+SCA +    + +  H   +KLG + +    +
Sbjct: 376 HGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGN 435

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+I+ Y+KCG I  AR+AFD   +  DV  +N+LI  +A HG V   ++ F +M     +
Sbjct: 436 ALINMYSKCGQIVPARLAFD-IMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGE 494

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKS-MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           P+++T + V++AC+H GLVD+G   F+S M   YG   +P  Y C+VDML R+G  +DA 
Sbjct: 495 PNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDAL 554

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +IE MPF+P   V+++LL+ CR+HGN E G  A+EKL+ L  ++ A++VL+S
Sbjct: 555 CLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMS 607



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 199/398 (50%), Gaps = 8/398 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + L+ +Y++CG       V   M   ++V++T +VSA  +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRIEKNPF 181
           +GEF M  +    M  +G MPNE  V S++  C  +     G  IH + +K +   ++ +
Sbjct: 176 SGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPL---VLGVQIHGYMIKAMGFSQSVY 232

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ G+   A+ VF ++   +V  W  M+  +   G   +AL +   M+ EG
Sbjct: 233 TSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEG 292

Query: 242 I-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           + + +++ F  AL  C  +A   +G Q+H L I+  +   + + NAL+ MY +   +   
Sbjct: 293 VVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQL 349

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  + D D++SW      + +N +  +  +L  +    G  PN   FS +L  C  L
Sbjct: 350 EAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADL 409

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             LD G Q  CLAL  G   +    ++LI M+ +CG +  A   FD + ++++T+WN L+
Sbjct: 410 ALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLI 469

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            G+  +     VLK F  +  +G E N  T   V+  C
Sbjct: 470 HGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAAC 507



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 182/367 (49%), Gaps = 10/367 (2%)

Query: 61  VLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           VLG Q+HG+++K +GF+  ++  + L+  YS+ G F     VFD +  +N+V+W  ++  
Sbjct: 212 VLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQL 271

Query: 120 AIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
            I++G  +  L+++ +M + G + PNEFA    +  C S+     G  +H  A+K  +  
Sbjct: 272 HIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLAS 328

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  ++L+ Y ++G V   E +F  I   D+  W A I  Y   G+G +A+ ++S M 
Sbjct: 329 HLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMH 388

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            +G+T + Y F + L  C+ +A  D GRQ H L ++   +      NALI+MY K   + 
Sbjct: 389 SQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIV 448

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A   F+ M  +DV SWN+L  G +++         F +   +G  PN  T   +L  C 
Sbjct: 449 PARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACN 508

Query: 359 KLLDLDLGLQL---QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
               +D G+         L+  FL   +  + ++ M  R G  + A  + + + ++  + 
Sbjct: 509 HAGLVDEGVAFFRSAMAGLYGTFLTPPHY-ACMVDMLGRSGRFDDALCLIEEMPFEPGVL 567

Query: 415 TWNELLS 421
            W  LL+
Sbjct: 568 VWKTLLA 574



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 227/546 (41%), Gaps = 12/546 (2%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF--AV 148
           K G     L +FD M  +N+V+WT  VS   +NG  +   +M+ DM  +G   N+F    
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNA 100

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
                     GA   G  +H  A++     + +VG  ++  YA+ G   AAE V   + S
Sbjct: 101 ALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMES 160

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            DV  + +++      G    A   +  M+  G+  +++T  + L  C  +    +G QI
Sbjct: 161 PDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAACCPLV---LGVQI 217

Query: 269 HGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           HG +I++     S+   + L+D Y ++   D A  VF+ +  K+V++W T+      +  
Sbjct: 218 HGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGR 277

Query: 328 PGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           P     LF + I  G   PN   FSI L  C  +    LG QL  LA+  G      V++
Sbjct: 278 PEDALQLFDEMISEGVVSPNEFAFSIALGACESIA---LGSQLHSLAIKHGLASHLRVSN 334

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +L+ M+ R G V+   ++F  +   +I +W   +S Y  N      +     +   G+  
Sbjct: 335 ALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTP 394

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           N   F  V+ +C          Q H   +K G        ++LI  Y   GQ+  +    
Sbjct: 395 NDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAF 454

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  +  D+ SW +++      G     +  F  +   G +P+E  L  +L +C   G   
Sbjct: 455 DIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVD 514

Query: 567 RTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
              +     +   + T +     + ++D   + G    A    ++      V+V+ TL+ 
Sbjct: 515 EGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574

Query: 625 AYAHHG 630
           +   HG
Sbjct: 575 SCRLHG 580



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 17/273 (6%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S  LG+Q+H   +K G  + + + N L++MY + G       +F  + + ++VSWT  +
Sbjct: 309 ESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAI 368

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           SA  QNG  +  + +   M + G  PN++A  SV+  C  +   + G   HC ALK+  +
Sbjct: 369 SAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCD 428

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
                G +++N Y+K G +  A   F  +   DV  WN++I G+A  G     L   S M
Sbjct: 429 VKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEM 488

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIG-----RQIHGL----IIRSEVECSISIVNALI 288
              G   ++ T +  L  C+     D G       + GL    +      C       ++
Sbjct: 489 CSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYAC-------MV 541

Query: 289 DMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           DM  +S   D A  + E M  +  V+ W TL  
Sbjct: 542 DMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLA 574


>gi|302808039|ref|XP_002985714.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
 gi|300146623|gb|EFJ13292.1| hypothetical protein SELMODRAFT_459 [Selaginella moellendorffii]
          Length = 659

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 172/663 (25%), Positives = 317/663 (47%), Gaps = 23/663 (3%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           +T ++ A  ++ +      +   M+ +G  PN   +  ++  C ++ +   G  IH + +
Sbjct: 4   YTALIGAYARSNDPLAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQWII 63

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
            + + ++  +G ++L  +A+ G +  A+  F +I+  D+  WNA+I   +H     +AL+
Sbjct: 64  DLGLHRDSVLGTALLTTFARCGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHDALD 123

Query: 233 VVSSMLFEGITMDKYTFINAL---QGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALI 288
           +   M  +GI  +  T +  L   Q  S  A     R +H L + S ++ S +++ N+++
Sbjct: 124 LFRRMQLDGIHPNAITLVAVLSIFQESSTDA-----RAVHSLAMESAMDASTVAVGNSIV 178

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY +   +D A   F R+  K+V+SWN +    S+       A +FH  +L G + +  
Sbjct: 179 NMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQLDRLHPLA-MFHAMMLEGIKADAT 237

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCG----FLDEENVTSSLIYMFCRCGAVEMAHSV 404
           TF  L         L  G  L   A   G     + +  + +SL+ MF +CG+V  A  +
Sbjct: 238 TFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHAREI 297

Query: 405 FD---NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           F    +   +N   WN +++    N   +D L  F  +   GV  +  TF   ++ C   
Sbjct: 298 FRENFHCHERNPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACTAL 357

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           E+      +HG I ++   +   + ++L+  Y    +LD +          D+ +W  ++
Sbjct: 358 EDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAFQRIHEPDLVAWNVLI 417

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A V   ++  A+ IF   +E   KPD     T L +C    A    + +H  + + G +
Sbjct: 418 AAHVDNANSSTALEIFFHRMEL--KPDRITFITTLAACVTASALPLGRRLHEQIRQRGLH 475

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V VASA++D Y+KCG ++ A   F       +   +N LI  +A HG    A  +  +
Sbjct: 476 SDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVRE 535

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+L  ++P   T+V ++ AC+H GL++ GC  F ++     +    + YGC+VD+L R G
Sbjct: 536 MQLEGVEPDSLTYVGLLLACTHAGLLEDGCKFFAALVEDKRLAVKEEHYGCVVDLLGRAG 595

Query: 702 YLEDAKHVI----EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            L +A+  +      MP   S  ++ SLLS   +HG+ EL   A+ ++L L P++ AA V
Sbjct: 596 KLAEAEEFLLGLRRAMPVAVSAAMWTSLLSAYGVHGDMELARRAARRVLDLEPRHPAAFV 655

Query: 758 LLS 760
           +LS
Sbjct: 656 VLS 658



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 138/637 (21%), Positives = 274/637 (43%), Gaps = 37/637 (5%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I L + LS    L S  LG ++H  I+ LG   D  L   L+  +++CG        F  
Sbjct: 37  ITLVEILSACTALHSIHLGDRIHQWIIDLGLHRDSVLGTALLTTFARCGSLDRAKAAFTA 96

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +A ++L++W  I++A   +      L ++  M+ +G  PN   + +V+ +     +S   
Sbjct: 97  IARKDLIAWNAIITATSHSNRSHDALDLFRRMQLDGIHPNAITLVAVLSIF--QESSTDA 154

Query: 165 YSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
            ++H  A++  ++ +   VG S++N YA+  D+  A   F  I S +V  WN MI  ++ 
Sbjct: 155 RAVHSLAMESAMDASTVAVGNSIVNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHSQ 214

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-----RSEVE 278
                  L +  +M+ EGI  D  TF+N   G +  +    G  +H         R+ + 
Sbjct: 215 LDR-LHPLAMFHAMMLEGIKADATTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIY 273

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGGFSENKNPGQTASLF 335
            ++ +  +L+ M+ K   + +A ++F       +++ + WN +     +N +      LF
Sbjct: 274 DAV-LATSLVTMFAKCGSVAHAREIFRENFHCHERNPVVWNAIIAALVQNHDFSDALLLF 332

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
               L G   + +TF   +  C  L D   G  L  +        +  V ++L+  + + 
Sbjct: 333 RTMQLQGVPSDAITFVSTIDACTALEDFPTGRALHGIISESSLETDTIVATALVNFYSKS 392

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
             ++ A + F  +   ++  WN L++ +  N   +  L+ F +  E  ++ +  TF   +
Sbjct: 393 RRLDAATAAFQRIHEPDLVAWNVLIAAHVDNANSSTALEIFFHRME--LKPDRITFITTL 450

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDM 514
             C  +    +  ++H  I + G  S   + S+L+  Y   G L+ +++ FS  A R + 
Sbjct: 451 AACVTASALPLGRRLHEQIRQRGLHSDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNS 510

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           A+W A+++     G +  A ++   +   G +PD      +L +C   G  +        
Sbjct: 511 ATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACTHAGLLEDGCKFFAA 570

Query: 575 VI---KLGFNTEVYVASAVIDAYAKCGDIK-------GARMAFDQSFNSNDVIVYNTLIM 624
           ++   +L    E Y    V+D   + G +        G R A   + ++    ++ +L+ 
Sbjct: 571 LVEDKRLAVKEEHY--GCVVDLLGRAGKLAEAEEFLLGLRRAMPVAVSAA---MWTSLLS 625

Query: 625 AYAHHGLVSEAMEIFDKM--KLANLQPSQATFVSVMS 659
           AY  HG     ME+  +   ++ +L+P       V+S
Sbjct: 626 AYGVHG----DMELARRAARRVLDLEPRHPAAFVVLS 658



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/534 (23%), Positives = 236/534 (44%), Gaps = 21/534 (3%)

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + A+IG YA       A  ++  M  +GI  ++ T +  L  C+ +    +G +IH 
Sbjct: 1   VAMYTALIGAYARSNDPLAAFTLLRQMQADGIPPNRITLVEILSACTALHSIHLGDRIHQ 60

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            II   +     +  AL+  + +   +D A   F  +A KD+I+WN +    S +     
Sbjct: 61  WIIDLGLHRDSVLGTALLTTFARCGSLDRAKAAFTAIARKDLIAWNAIITATSHSNRSHD 120

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSL 388
              LF +  L G  PN +T   +L    +    D    +  LA+    +D   V   +S+
Sbjct: 121 ALDLFRRMQLDGIHPNAITLVAVL-SIFQESSTD-ARAVHSLAMESA-MDASTVAVGNSI 177

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ RC  ++ A   F  +  KN+ +WN ++S +         L  F  +   G++ + 
Sbjct: 178 VNMYARCRDLDRARLAFARIQSKNVVSWNVMISAHS-QLDRLHPLAMFHAMMLEGIKADA 236

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC----GYICSSLIKSYVNFGQLDNSFE 504
            TF  +          +    +H    + G          + +SL+  +   G + ++ E
Sbjct: 237 TTFVNLASGLAAPSPLRDGELLHRCARELGGGRTLIYDAVLATSLVTMFAKCGSVAHARE 296

Query: 505 FSNG----AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
                    ER +   W A+++ALV      +A+ +F ++   G   D     + +++C 
Sbjct: 297 IFRENFHCHER-NPVVWNAIIAALVQNHDFSDALLLFRTMQLQGVPSDAITFVSTIDACT 355

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           A+  +   +++H  + +    T+  VA+A+++ Y+K   +  A  AF Q  +  D++ +N
Sbjct: 356 ALEDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAF-QRIHEPDLVAWN 414

Query: 621 TLIMAYAHHGLVSEAMEI-FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
            LI A+  +   S A+EI F +M+   L+P + TF++ ++AC     +  G  L + +  
Sbjct: 415 VLIAAHVDNANSSTALEIFFHRME---LKPDRITFITTLAACVTASALPLGRRLHEQI-R 470

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           Q G+         LVDM S+ G LE+A  V   M  + +   + +L++G   HG
Sbjct: 471 QRGLHSDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGHAQHG 524



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 3/216 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I    ++     L+    G  +HG I +     D  +   L+  YSK          F
Sbjct: 343 DAITFVSTIDACTALEDFPTGRALHGIISESSLETDTIVATALVNFYSKSRRLDAATAAF 402

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + E +LV+W ++++A + N      L+++         P+     + +  CV+  A  
Sbjct: 403 QRIHEPDLVAWNVLIAAHVDNANSSTALEIF--FHRMELKPDRITFITTLAACVTASALP 460

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGY 221
            G  +H    +  +  +  V  ++++ Y+K G +  A +VF +++   +   WNA+I G+
Sbjct: 461 LGRRLHEQIRQRGLHSDVVVASALVDMYSKCGSLEEAYQVFSTMAGRRNSATWNALIAGH 520

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           A  G+   A ++V  M  EG+  D  T++  L  C+
Sbjct: 521 AQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACT 556



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 17/194 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D I    +L+      +  LG ++H  I + G  +D+ + + L+ MYSKCG      
Sbjct: 439 LKPDRITFITTLAACVTASALPLGRRLHEQIRQRGLHSDVVVASALVDMYSKCGSLEEAY 498

Query: 100 RVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +VF  MA  RN  +W  +++   Q+G       +  +M+  G  P+      ++  C   
Sbjct: 499 QVFSTMAGRRNSATWNALIAGHAQHGFSGRAPSLVREMQLEGVEPDSLTYVGLLLACTHA 558

Query: 159 GASEFGYSIHCFALKIRIE------KNPFVGCSVLNFYAKLGDVAAAERVFYSIS----- 207
           G  E G    C      +E      K    GC V++   + G +A AE     +      
Sbjct: 559 GLLEDG----CKFFAALVEDKRLAVKEEHYGC-VVDLLGRAGKLAEAEEFLLGLRRAMPV 613

Query: 208 SDDVGCWNAMIGGY 221
           +     W +++  Y
Sbjct: 614 AVSAAMWTSLLSAY 627


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 300/564 (53%), Gaps = 9/564 (1%)

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A ++F  ++  D   WN MI G+  CG   EA+   S M+F G+  D +T+   ++  + 
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           ++  + G++IH ++I+      + + N+LI +Y+K      A KVFE M ++D++SWN++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G+    +   +  LF + +  G +P+  +    L  C  +    +G ++ C A+    
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262

Query: 379 -LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
              +  V +S++ M+ + G V  A  +F+ +  +NI  WN ++  Y  N    D    F 
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322

Query: 438 NIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            + E +G++ +  T   ++      E +     IHG  ++ GF     + ++LI  Y   
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILEGRT----IHGYAMRRGFLPHMVLETALIDMYGEC 378

Query: 497 GQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
           GQL ++   F   AE+ ++ SW ++++A V  G N+ A+ +F  L ++   PD   + +I
Sbjct: 379 GQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L + A   +    + IH +++K  + +   + ++++  YA CGD++ AR  F+      D
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL-LKD 496

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           V+ +N++IMAYA HG    ++ +F +M  + + P+++TF S+++ACS  G+VD+G   F+
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           SM  +YG+ P  + YGC++D++ R G    AK  +E MPF P+  ++ SLL+  R H + 
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616

Query: 736 ELGEWASEKLLLLLPKNDAAHVLL 759
            + E+A+E++  +   N   +VLL
Sbjct: 617 TIAEFAAEQIFKMEHDNTGCYVLL 640



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 9/415 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+ KS++   +L+    G ++H  ++KLGF +D+++ N+LI++Y K G      +VF+EM
Sbjct: 135 FVIKSVAGISSLEE---GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            ER++VSW  ++S  +  G+    L ++ +M   GF P+ F+  S +  C  + + + G 
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251

Query: 166 SIHCFALKIRIEK-NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            IHC A++ RIE  +  V  S+L+ Y+K G+V+ AER+F  +   ++  WN MIG YA  
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311

Query: 225 GYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
           G   +A      M  + G+  D  T IN L   +++     GR IHG  +R      + +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVL 367

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             ALIDMY +   +  A  +F+RMA+K+VISWN++   + +N        LF +   S  
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P+  T + +L    + L L  G ++    +   +     + +SL++M+  CG +E A  
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            F+++  K++ +WN ++  Y  +      +  F  +  S V  N  TF  ++  C
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 233/468 (49%), Gaps = 6/468 (1%)

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            L++FDEM + +   W +++      G +   ++ Y  M   G   + F    V+K    
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           + + E G  IH   +K+    + +V  S+++ Y KLG    AE+VF  +   D+  WN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I GY   G GF +L +   ML  G   D+++ ++AL  CS V    +G++IH   +RS +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262

Query: 278 EC-SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           E   + ++ +++DMY K   + YA ++F  M  +++++WN + G ++ N         F 
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322

Query: 337 KFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           K    +G +P+ +T SI L     +L+   G  +   A+  GFL    + ++LI M+  C
Sbjct: 323 KMSEQNGLQPDVIT-SINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G ++ A  +FD ++ KN+ +WN +++ Y  N  +   L+ F  +W+S +  +  T   ++
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                S +     +IH  I+K+ + S   I +SL+  Y   G L+++ +  N     D+ 
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           SW +++ A    G    +V +F  ++ +   P++    ++L +C+  G
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/453 (21%), Positives = 209/453 (46%), Gaps = 11/453 (2%)

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           +  S  M+ A ++F+ M   D   WN +  GF+      +    + + + +G + +  T+
Sbjct: 74  FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             +++    +  L+ G ++  + +  GF+ +  V +SLI ++ + G    A  VF+ +  
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++I +WN ++SGY         L  F  + + G + +  +    +  C    + +M  +I
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253

Query: 471 HGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           H   +++   +    + +S++  Y  +G++  +    NG  + ++ +W  M+      G 
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313

Query: 530 NHEAVTIFHSLVEA-GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             +A   F  + E  G +PD      +L + A +      ++IH + ++ GF   + + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLET 369

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+ID Y +CG +K A + FD+    N VI +N++I AY  +G    A+E+F ++  ++L 
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKN-VISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           P   T  S++ A +    + +G  +   +  S+Y    +      LV M +  G LEDA+
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRY--WSNTIILNSLVHMYAMCGDLEDAR 486

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
                +  +   + + S++    +HG   +  W
Sbjct: 487 KCFNHILLKDVVS-WNSIIMAYAVHGFGRISVW 518



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 1/246 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG+ ++ GF   + L+  LI MY +CG       +FD MAE+N++SW  I++A +Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG+    L+++ ++  +  +P+   + S++       +   G  IH + +K R   N  +
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ YA  GD+  A + F  I   DV  WN++I  YA  G+G  ++ + S M+   +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAF 301
             +K TF + L  CS+    D G +    + R   ++  I     ++D+  ++     A 
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588

Query: 302 KVFERM 307
           +  E M
Sbjct: 589 RFLEEM 594



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 20/225 (8%)

Query: 458 CCRSENQQMVGQIHGAI---IKTGFSSCGYIC----------------SSLIKSYVNFGQ 498
           C  SEN Q  G+ +G       +G S    +                 +  ++ + +   
Sbjct: 20  CVSSENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRL 79

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           ++++ +  +   + D   W  M+      G   EAV  +  +V AG K D +    ++ S
Sbjct: 80  MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
            A I + +  K IH  VIKLGF ++VYV +++I  Y K G    A   F++     D++ 
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE-MPERDIVS 198

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +N++I  Y   G    ++ +F +M     +P + + +S + ACSH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 45/215 (20%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A+SLSLSE       G ++H +IVK  + ++  + N+L+ MY+ CG      + F+ +  
Sbjct: 442 AESLSLSE-------GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           +++VSW  I+ A   +G   + + ++ +M  +   PN+    S++  C   G  + G+  
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554

Query: 168 H-----------------CF-----------ALKIRIEKNPFVGC-----SVLNFYAKLG 194
                             C            A K  +E+ PFV       S+LN      
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHK 614

Query: 195 DVA----AAERVFYSISSDDVGCWNAMIGGYAHCG 225
           D+     AAE++F  +  D+ GC+  ++  YA  G
Sbjct: 615 DITIAEFAAEQIF-KMEHDNTGCYVLLLNMYAEAG 648


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 296/596 (49%), Gaps = 3/596 (0%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  AL+     + F G +++ FYA  G    A RVF  +   DV  WN+++  +  
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   +A   + SM+  G  ++  + ++ +  C    +   G  IH L ++  +   +++
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+DMY K   ++ + +VF+ M +++ +SWN+  G F      G    +F K      
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNV 317

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P  +T S LL    +L   DLG ++   ++      +  V +SL+ M+ + G++E A +
Sbjct: 318 MPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAST 377

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F+ +  +N+ +WN +++    N  + +  +   ++ +SG   N  T   V+  C R  +
Sbjct: 378 IFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMAS 437

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +M  QIH   I+ G     +I ++LI  Y   GQL  +      +E+ D+ S+  ++  
Sbjct: 438 LKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILG 496

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                   E++ +F  +   G   D       L++C  +  ++  K IH  +++   +  
Sbjct: 497 YSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGH 556

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            +++++++D Y K G +  A   F++     DV  +NT+I+ Y  HG +  A E+F+ MK
Sbjct: 557 PFLSNSLLDLYTKGGMLVTASKIFNK-ITKKDVASWNTMILGYGMHGQIDIAFELFELMK 615

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              L     ++++V++ACSH GLVDKG   F  M +Q  ++P    Y C+VD+L R G L
Sbjct: 616 GDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQL 674

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
                +I  MPF  +  V+ +LL  CRIHGN EL +WA+E L  L P++   + L+
Sbjct: 675 SKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLM 730



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 284/597 (47%), Gaps = 5/597 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   ++ G   D+F  N L+A Y+ CG      RVFDEM ER++VSW  +VSA + 
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLV 197

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG F    +  V M  +GF  N  ++ SV+  C +    +FG SIH  A+K+ +     +
Sbjct: 198 NGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNL 257

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y K GDV A+ +VF  +   +   WN+ IG + + G+  + L +   M    +
Sbjct: 258 ANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNV 317

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T  + L     +  FD+GR++HG  I+  ++  I + N+L+DMY K   ++ A  
Sbjct: 318 MPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKAST 377

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FE+M D++V+SWN +     +N    +   L      SG  PN +T   +L  C ++  
Sbjct: 378 IFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMAS 437

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G Q+   ++  G + +  ++++LI M+ +CG + +A ++F+  S K+  ++N L+ G
Sbjct: 438 LKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILG 496

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + L  F  +   G++ +  +F   +  C      +   +IH  +++   S  
Sbjct: 497 YSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGH 556

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ +SL+  Y   G L  + +  N   + D+ASW  M+      G    A  +F  +  
Sbjct: 557 PFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKG 616

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI-K 601
            G   D      +L +C+  G   + K     ++      +    + ++D   + G + K
Sbjct: 617 DGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSK 676

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            A +  D  F +N   V+  L+ A   HG +  A   +    L  L+P  + + ++M
Sbjct: 677 CAEIIRDMPFPANS-DVWGALLGACRIHGNIELAQ--WAAEHLFELKPEHSGYYTLM 730



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 138/567 (24%), Positives = 257/567 (45%), Gaps = 17/567 (2%)

Query: 180 PFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           P  G  +L+ YA L D+A+A  V   + +       WN++    +      EAL V + M
Sbjct: 50  PLAGALLLS-YAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLM 108

Query: 238 LFEGITMDKYT--FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           L   +  D  T  F       ++ +  D G ++H   +R      +   N L+  Y    
Sbjct: 109 LRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACG 168

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A +VF+ M ++DV+SWN+L   F  N             + SG   N  +   ++ 
Sbjct: 169 KACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVP 228

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            CG   +   GL +  LA+  G     N+ ++L+ M+ + G VE +  VFD +  +N  +
Sbjct: 229 ACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVS 288

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN  +  +       DVL+ F  + E  V     T   ++       +  +  ++HG  I
Sbjct: 289 WNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSI 348

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K       ++ +SL+  Y  FG L+ +       +  ++ SW AM++ LV  G   EA  
Sbjct: 349 KRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFR 408

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +   + ++GE P+   L  +L +CA + + +  K IH + I+ G   ++++++A+ID Y+
Sbjct: 409 LVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYS 468

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG +  AR  F++S    D + YNTLI+ Y+      E++ +F +M+   +     +F+
Sbjct: 469 KCGQLSLARNIFERS--EKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFM 526

Query: 656 SVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             +SAC++  +   G    C+L + + S +     P     L+D+ ++ G L  A  +  
Sbjct: 527 GALSACTNLSVFKHGKEIHCVLVRRLLSGH-----PFLSNSLLDLYTKGGMLVTASKIFN 581

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELG 738
            +  +     + +++ G  +HG  ++ 
Sbjct: 582 KIT-KKDVASWNTMILGYGMHGQIDIA 607



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 172/321 (53%), Gaps = 9/321 (2%)

Query: 50  SLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           S++LS  L + V      LG +VHG+ +K     DIF+ N+L+ MY+K G       +F+
Sbjct: 321 SITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFE 380

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M +RN+VSW  +++  +QNG      ++  DM+ +G  PN   + +V+  C  M + + 
Sbjct: 381 QMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKM 440

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  IH ++++  +  + F+  ++++ Y+K G ++ A  +F     DDV  +N +I GY+ 
Sbjct: 441 GKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQ 499

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
             + FE+L +   M   GI  D  +F+ AL  C+ ++ F  G++IH +++R  +     +
Sbjct: 500 SPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFL 559

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            N+L+D+Y K   +  A K+F ++  KDV SWNT+  G+  +        LF      G 
Sbjct: 560 SNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGL 619

Query: 344 RPNHVTFSILLRQC--GKLLD 362
             +HV++  +L  C  G L+D
Sbjct: 620 DYDHVSYIAVLAACSHGGLVD 640



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 214/478 (44%), Gaps = 19/478 (3%)

Query: 266 RQIHGL-IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGGF 322
           R+ H   ++   +  S+ +  AL+  Y   S +  A  V     +  +    WN+L    
Sbjct: 33  RRAHAASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRAL 92

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL--DLGLQLQCLALHCGFLD 380
           S    P +   +++  + S  RP+  TF   L      +    D GL+L   AL  G L 
Sbjct: 93  SSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLA 152

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +    ++L+  +  CG    A  VFD +  +++ +WN L+S +  N    D  +   ++ 
Sbjct: 153 DVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMM 212

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            SG  +N  +   VV  C   + ++    IH   +K G ++   + ++L+  Y  FG ++
Sbjct: 213 RSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            S +  +G    +  SW + +   ++ G   + + +F  + E    P    L ++L +  
Sbjct: 273 ASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALV 332

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +G++   + +H + IK   + +++VA++++D YAK G ++ A   F+Q  + N V+ +N
Sbjct: 333 ELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRN-VVSWN 391

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            +I     +G  +EA  +   M+ +   P+  T V+V+ AC+    +  G  +  +   +
Sbjct: 392 AMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQI-HAWSIR 450

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE------------IMPFQPSPTVYRSLL 726
            G+         L+DM S+ G L  A+++ E            I+ +  SP  + SLL
Sbjct: 451 RGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDVSYNTLILGYSQSPWCFESLL 508



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/181 (19%), Positives = 82/181 (45%), Gaps = 5/181 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +    +LS   NL     G ++H  +V+   +   FL N+L+ +Y+K G      ++F
Sbjct: 521 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 580

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +++ ++++ SW  ++     +G+ D+  +++  MK +G   +  +  +V+  C   G  +
Sbjct: 581 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 640

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIG 219
            G       +   IE        +++   + G ++    +   +   ++ DV  W A++G
Sbjct: 641 KGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDV--WGALLG 698

Query: 220 G 220
            
Sbjct: 699 A 699


>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 718

 Score =  279 bits (713), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 166/608 (27%), Positives = 303/608 (49%), Gaps = 34/608 (5%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K   +  A  +F  +   D G WNA+I  Y  CGY  +AL +   M  EG+  ++ TF
Sbjct: 102 YGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITF 161

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L+ CS V D  + RQIHGLI++     ++ + +AL+D+Y K   M  A  +F  + +
Sbjct: 162 ASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIEN 221

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            + ++WN +   + +  N  +   +F K   +  RP + TFS  L  C  +  L+ G+Q+
Sbjct: 222 CNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQI 281

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN------VSYKN----------- 412
              A+   F ++E V+SSL  M+ +CG +E A  +FD       +S+ +           
Sbjct: 282 HAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRT 341

Query: 413 --------------ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
                         + +WN +L+GY  +    + L   C +  +  +++  T   ++  C
Sbjct: 342 REARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVC 401

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASW 517
               + +M  Q HG I + GFSSC  + ++L+  Y   G L ++   F   ++  D  SW
Sbjct: 402 AGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISW 461

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            A++++      + +A+ IF  + +   KP  +  GT+L +CA I A  + K IH F+I+
Sbjct: 462 NALLTSYARHHQSEQAMMIFGEM-QWETKPSTFTFGTLLAACANIFALDQGKEIHGFMIR 520

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G+N +  ++ A++D Y+KC  +  A   F+++  S DVI++N++I+   H+G   E ++
Sbjct: 521 NGYNLDTVISGALVDMYSKCRCLSYALTVFNRA-GSRDVILWNSIILGCCHNGRGKEVLK 579

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F +M+   ++P   TF  V+ AC ++G V      F SM  +  + P  + Y C++++ 
Sbjct: 580 LFGQMEKEGVKPDHVTFHGVLLACMYEGHVKLAVEYFNSMSDKCCVIPRLEHYECMIELF 639

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
           SR   +   ++ ++ MPF P+ ++   +   C+ HG     +W +E+L  L P   +   
Sbjct: 640 SRYRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQFQ 699

Query: 758 LLSKRKRQ 765
           +  +  RQ
Sbjct: 700 IRDEPNRQ 707



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 230/503 (45%), Gaps = 38/503 (7%)

Query: 231 LNVVSSMLFEGITMDKYTFINAL-QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           L    S+LF   +   Y+   +L Q CS        R+I   +I       I ++N  I+
Sbjct: 41  LQKAVSILFASNSSVPYSLYASLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIE 100

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
            Y K   +  A ++F+ M  +D  SWN +   +++     +   LF      G   N +T
Sbjct: 101 TYGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEIT 160

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           F+ +L+ C  +LDL L  Q+  L + CGF     + S+L+ ++ +C  +  A  +F+ + 
Sbjct: 161 FASVLKSCSDVLDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIE 220

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC--RSENQQMV 467
             N  TWN ++  Y     + + +K F  ++++ V     TF   +  C   R+ N+ M 
Sbjct: 221 NCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGM- 279

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            QIH   IK  F     + SSL   Y   G+L+++    +     D+ SW +M+SA    
Sbjct: 280 -QIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALS 338

Query: 528 GHNHEAVTIFHSLVE----------AG---------------------EKPDEYILGTIL 556
           G   EA  +F  + E          AG                     E  D   LG +L
Sbjct: 339 GRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLL 398

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           N CA I   +  K  H F+ + GF++ + V +A++D Y KCG+++ AR+ F Q   S D 
Sbjct: 399 NVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDN 458

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +N L+ +YA H    +AM IF +M+    +PS  TF ++++AC++   +D+G  +   
Sbjct: 459 ISWNALLTSYARHHQSEQAMMIFGEMQWET-KPSTFTFGTLLAACANIFALDQGKEIHGF 517

Query: 677 MDSQYGMQPSPDCYGCLVDMLSR 699
           M  + G        G LVDM S+
Sbjct: 518 M-IRNGYNLDTVISGALVDMYSK 539



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 234/550 (42%), Gaps = 36/550 (6%)

Query: 44  PIFLAKSL-SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           P  L  SL  L  +  S V   ++  H++    T  IFL N  I  Y KC        +F
Sbjct: 56  PYSLYASLFQLCSSTLSIVEARKIESHLITFNPTPPIFLLNRAIETYGKCECLKDARELF 115

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DEM +R+  SW  I+ A  Q G  +  L ++ DM   G   NE    SV+K C  +    
Sbjct: 116 DEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDVLDLS 175

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               IH   +K     N  +G ++++ Y K   ++ A  +F  I + +   WN ++  Y 
Sbjct: 176 LSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIVRRYL 235

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   EA+ +   M    +    +TF NAL  CS +   + G QIH   I+ + E   +
Sbjct: 236 DVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRALNEGMQIHAFAIKIKFEEDEA 295

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF---- 338
           + ++L +MY K   ++ A  +F++   +DVISW ++   ++ +    +   LF K     
Sbjct: 296 VSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSAYALSGRTREARELFEKMPEWS 355

Query: 339 ------ILSG---------------------SRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
                 +L+G                        +H+T  +LL  C  + D+++G Q   
Sbjct: 356 VVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHITLGLLLNVCAGISDVEMGKQAHG 415

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDA 430
                GF     V ++L+ M+ +CG +  A   F  +S  ++  +WN LL+ Y  +    
Sbjct: 416 FIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSE 475

Query: 431 DVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
             +  F  + WE+  + +  TF  ++  C          +IHG +I+ G++    I  +L
Sbjct: 476 QAMMIFGEMQWET--KPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVISGAL 533

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y     L  +    N A   D+  W +++    H G   E + +F  + + G KPD 
Sbjct: 534 VDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLFGQMEKEGVKPDH 593

Query: 550 YILGTILNSC 559
                +L +C
Sbjct: 594 VTFHGVLLAC 603



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 2/215 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   L++   +    +G Q HG I + GF++ I + N L+ MY KCG        F
Sbjct: 390 DHITLGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWF 449

Query: 103 DEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
            +M++ R+ +SW  ++++  ++ + +  + ++ +M+     P+ F  G+++  C ++ A 
Sbjct: 450 YQMSQSRDNISWNALLTSYARHHQSEQAMMIFGEMQWET-KPSTFTFGTLLAACANIFAL 508

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  IH F ++     +  +  ++++ Y+K   ++ A  VF    S DV  WN++I G 
Sbjct: 509 DQGKEIHGFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGC 568

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            H G G E L +   M  EG+  D  TF   L  C
Sbjct: 569 CHNGRGKEVLKLFGQMEKEGVKPDHVTFHGVLLAC 603



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG +++ G+  D  +   L+ MYSKC    + L VF+    R+++ W  I+     
Sbjct: 511 GKEIHGFMIRNGYNLDTVISGALVDMYSKCRCLSYALTVFNRAGSRDVILWNSIILGCCH 570

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           NG     LK++  M+  G  P+      V+  C+  G
Sbjct: 571 NGRGKEVLKLFGQMEKEGVKPDHVTFHGVLLACMYEG 607


>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 183/706 (25%), Positives = 337/706 (47%), Gaps = 75/706 (10%)

Query: 62  LGTQVHGHIVKLGFTNDI--FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           +G ++H  I   G   ++  F++  L++MY+KCG  G   +VF+EM+ RNL +W+ ++  
Sbjct: 101 IGKELHSRI---GLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGG 157

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             +N  +   + ++  M  +G +P+EF +  V++ C      E G  IH   ++  +  +
Sbjct: 158 CSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWS 217

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +  S++  YAK G++  A+++F  +   D   WNAMI G+   G   +A     +M  
Sbjct: 218 KHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQK 277

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G                                   VE S+   N LI  Y +    D 
Sbjct: 278 DG-----------------------------------VEPSLVTWNILISCYNQLGHCDL 302

Query: 300 AFKVFERMA----DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           A  +  +M       DV +W ++  GF++         L  +  L+G   N++T +    
Sbjct: 303 AIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAAS 362

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L  L +GL++  +A+    +D   V +SLI M+C+CG ++ A  +FD +S +++ +
Sbjct: 363 ACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYS 422

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++ GY          + F  + ES    N  T+                      I+
Sbjct: 423 WNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITW---------------------NIM 461

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
            TG+   G    +L         L  S E  +G  + + ASW +++S  V  G   +A+ 
Sbjct: 462 ITGYMQSGAEDQAL--------DLFKSIE-KDGKTKRNAASWNSLISGFVQSGQKDKALQ 512

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           IF ++      P+   + +IL  CA + A ++ K IH F ++    +E+ V++ +ID+YA
Sbjct: 513 IFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYA 572

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           K G++  ++  F++  +  D + +N+++ +Y  HG    A+++F +M+   LQP++ TF 
Sbjct: 573 KSGNLMYSKNIFNE-LSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFA 631

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           S++ A  H G+VD+G  +F  +   Y ++   + Y  +V +L R+G L +A   I+ MP 
Sbjct: 632 SILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPI 691

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           +P+ +V+ +LL+ CRIH N  +   A +++L   P N+    LLS+
Sbjct: 692 EPNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQ 737



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 127/544 (23%), Positives = 225/544 (41%), Gaps = 79/544 (14%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L K L      +    G  +H  +++ G      L+N+++A+Y+KCG      ++F
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M ER+ V+W  ++S   QNGE     K +  M+ +G  P+                  
Sbjct: 242 DCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPS------------------ 283

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS----SDDVGCWNAMI 218
                        +  N  + C     Y +LG    A  +   +     + DV  W +MI
Sbjct: 284 ------------LVTWNILISC-----YNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMI 326

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            G+   G    AL+++  M   G+  +  T  +A   C+ +    +G +IH + ++  + 
Sbjct: 327 SGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLV 386

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ + N+LIDMY K   +  A  +F+ M+++DV SWN++ GG+ +    G+   LF K 
Sbjct: 387 DNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKM 446

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
             S S PN +T++I                                   +I  + + GA 
Sbjct: 447 QESDSPPNIITWNI-----------------------------------MITGYMQSGAE 471

Query: 399 EMAHSVF-----DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + A  +F     D  + +N  +WN L+SG+  +      L+ F N+    +  N  T   
Sbjct: 472 DQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILS 531

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           ++  C      + V +IH   ++    S   + + LI SY   G L  S    N     D
Sbjct: 532 ILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKD 591

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
             SW +M+S+ V  G +  A+ +F+ + + G +P+     +IL +    G     KS+  
Sbjct: 592 AVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFS 651

Query: 574 FVIK 577
            + K
Sbjct: 652 CITK 655



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/296 (21%), Positives = 139/296 (46%), Gaps = 7/296 (2%)

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L+  C N   ++ +    ++ E G  V   T+  ++++C   +   +  ++H  I   G 
Sbjct: 55  LNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRI---GL 111

Query: 480 --SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
             +   ++ + L+  Y   G L  + +  N     ++ +W AM+          E V +F
Sbjct: 112 VENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLF 171

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           ++++  G  PDE++L  +L +C      +  + IH  VI+ G     ++ ++++  YAKC
Sbjct: 172 YAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKC 231

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G++  A+  FD   +  D + +N +I  +  +G + +A + FD M+   ++PS  T+  +
Sbjct: 232 GEMDCAKKIFD-CMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNIL 290

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +S  +  G  D    L + M+  +G+ P    +  ++   ++ G +  A  +++ M
Sbjct: 291 ISCYNQLGHCDLAIDLMRKME-WFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 11/293 (3%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVF-----DEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
           +I   N +I  Y + G     L +F     D   +RN  SW  ++S  +Q+G+ D  L++
Sbjct: 454 NIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQI 513

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           + +M+    +PN   + S++ VC ++ AS+    IHCFA++  +     V   +++ YAK
Sbjct: 514 FRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAK 573

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
            G++  ++ +F  +S  D   WN+M+  Y   G    AL++   M  +G+  ++ TF + 
Sbjct: 574 SGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASI 633

Query: 253 LQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DK 310
           L         D G+ +   I +   V   +   +A++ +  +S  +  A    + M  + 
Sbjct: 634 LLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEP 693

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ---CGKL 360
           +   W  L      ++N G  A L  K +L     N++T  +L +    CGK 
Sbjct: 694 NSSVWGALLTACRIHRNFG-VAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKF 745



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 8/222 (3%)

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           + ++ L   G   EAVTI  SL E G +        +L SC         K +H   I L
Sbjct: 53  SQLNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHS-RIGL 111

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
             N   +V + ++  YAKCG +  AR  F++  +  ++  ++ +I   + +    E + +
Sbjct: 112 VENVNPFVETKLVSMYAKCGLLGMARKVFNE-MSVRNLFTWSAMIGGCSRNKSWGEVVGL 170

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F  M    + P +     V+ AC     ++ G L+  SM  + GM+ S      ++ + +
Sbjct: 171 FYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLI-HSMVIRRGMRWSKHLRNSIMAVYA 229

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSG-CRIHGNKELGE 739
           + G ++ AK + + M  + S   + +++SG C+   N E+G+
Sbjct: 230 KCGEMDCAKKIFDCMDERDS-VAWNAMISGFCQ---NGEIGQ 267


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 178/611 (29%), Positives = 301/611 (49%), Gaps = 2/611 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C+   +      IH   LK     +  V   +   Y     V  A R+F  I +  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN +I  YA  G    A+++  SML  G+  +KYT+   L+ CS +   + G +IH 
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
                 +E  + +  AL+D Y K   +  A ++F  M+ +DV++WN +  G S       
Sbjct: 134 HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDD 193

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              L  +    G  PN  T   +L   G+   L  G  L    +   F +   V + L+ 
Sbjct: 194 AVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLD 253

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGC 449
           M+ +C  +  A  +FD +  +N  +W+ ++ GY  + C  + L+ F   I +  ++    
Sbjct: 254 MYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPV 313

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C +  +     ++H  IIK G      + ++L+  Y   G +D++  F +  
Sbjct: 314 TLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXM 373

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D  S+ A++S  V  G+   A++IF  +  +G  PD   +  +L +C+ + A Q   
Sbjct: 374 NPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGF 433

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             H ++I  GF T+  + +A+ID Y+KCG I  AR  F++  + +D++ +N +I+ Y  H
Sbjct: 434 CSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR-MDRHDIVSWNAMIIGYGIH 492

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           GL  EA+ +F  +    L+P   TF+ ++S+CSH GLV +G L F +M   + + P  + 
Sbjct: 493 GLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEH 552

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
             C+VD+L R G +++A H I  MPF+P   ++ +LLS CRIH N ELGE  S+K+  L 
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLG 612

Query: 750 PKNDAAHVLLS 760
           P++    VLLS
Sbjct: 613 PESTGNFVLLS 623



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 179/644 (27%), Positives = 298/644 (46%), Gaps = 24/644 (3%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS     ++H H +K     D  + + L  +Y  C       R+FDE+   +++ W  I+
Sbjct: 22  KSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSVILWNQII 81

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
            A   NG FD  + +Y  M   G  PN++    V+K C  + A E G  IH  A    +E
Sbjct: 82  RAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLE 141

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + FV  ++++FYAK G +  A+R+F S+S  DV  WNAMI G +  G   +A+ ++  M
Sbjct: 142 SDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQM 201

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EGI  +  T +  L           G+ +HG  +R   +  + +   L+DMY K   +
Sbjct: 202 QEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCL 261

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQ 356
            YA K+F+ M  ++ +SW+ + GG+  +    +   LF + IL  +  P  VT   +LR 
Sbjct: 262 LYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRA 321

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C KL DL  G +L C  +  G + +  + ++L+ M+ +CG ++ A   FD ++ K+  ++
Sbjct: 322 CAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSF 381

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + ++SG   N   A  L  F  +  SG++ +  T   V+  C      Q     HG +I 
Sbjct: 382 SAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 441

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            GF++   IC++LI  Y   G++  + E  N  +R D+ SW AM+      G   EA+ +
Sbjct: 442 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 501

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIG----------AYQRTKSIHPFVIKLGFNTEVYV 586
           FH L+  G KPD+     +L+SC+  G          A  R  SI P          +  
Sbjct: 502 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVP---------RMEH 552

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
              ++D   + G I  A           DV +++ L+ A   H  +    E+  K++  +
Sbjct: 553 CICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ--S 610

Query: 647 LQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           L P S   FV + +  S  G  D    + +     +G++  P C
Sbjct: 611 LGPESTGNFVLLSNIYSAAGRWDDAAHI-RITQKDWGLKKIPGC 653



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 228/495 (46%), Gaps = 16/495 (3%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           K  +++ L+ C         ++IH   +++      S+++ L  +Y+  + +  A ++F+
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            + +  VI WN +   ++ N        L+H  +  G RPN  T+  +L+ C  LL ++ 
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG-YC 424
           G+++   A   G   +  V ++L+  + +CG +  A  +F ++S++++  WN +++G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           +  CD D ++    + E G+  N  T   V+ T   ++       +HG  ++  F +   
Sbjct: 188 YGLCD-DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EA 543
           + + L+  Y     L  + +  +     +  SW AM+   V      EA+ +F  ++ + 
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKD 306

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              P    LG++L +CA +    R + +H ++IKLG   ++ + + ++  YAKCG I  A
Sbjct: 307 AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDA 366

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD   N  D + ++ ++     +G  + A+ IF  M+L+ + P   T + V+ ACSH
Sbjct: 367 IRFFD-XMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425

Query: 664 -----KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
                 G    G L+ +      G          L+DM S+ G +  A+ V   M  +  
Sbjct: 426 LAALQHGFCSHGYLIVR------GFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHD 478

Query: 719 PTVYRSLLSGCRIHG 733
              + +++ G  IHG
Sbjct: 479 IVSWNAMIIGYGIHG 493



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 19/304 (6%)

Query: 37  DSFLRKD-----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           D  + KD     P+ L   L     L     G ++H +I+KLG   DI L N L++MY+K
Sbjct: 300 DQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAK 359

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG     +R FD M  ++ VS++ IVS  +QNG   + L ++  M+ +G  P+   +  V
Sbjct: 360 CGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGV 419

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  + A + G+  H + +      +  +  ++++ Y+K G ++ A  VF  +   D+
Sbjct: 420 LPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDI 479

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDI 264
             WNAMI GY   G G EAL +   +L  G+  D  TFI  L  CS   LV +    FD 
Sbjct: 480 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA 539

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFS 323
             +   ++ R E  C       ++D+  ++  +D A      M  + DV  W+ L     
Sbjct: 540 MSRDFSIVPRME-HCI-----CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593

Query: 324 ENKN 327
            +KN
Sbjct: 594 IHKN 597


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 185/725 (25%), Positives = 362/725 (49%), Gaps = 23/725 (3%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           + + + L  +  S  L +Q+H H++  G    D      LI  Y+  G       VF+  
Sbjct: 1   MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--- 162
              +   + +++   +     D  + +Y  + +     ++F   SV++ C   G+ E   
Sbjct: 61  PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLS 118

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H   +K  ++ +  +  S+L  Y + G+++ AE+VF  +   D+  W+ ++    
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   +AL +   M+ +G+  D  T I+ ++GC+ +    I R +HG I R   +   +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+L+ MY K   +  + ++FE++A K+ +SW  +   ++  +   +    F + I SG
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-----LDE--ENVTSSLIYMFCRC 395
             PN VT   +L  CG      +GL  +  ++H GF     LD   E+++ +L+ ++  C
Sbjct: 299 IEPNLVTLYSVLSSCGL-----IGLIREGKSVH-GFAVRRELDPNYESLSLALVELYAEC 352

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +    +V   VS +NI  WN L+S Y         L  F  +    ++ +  T    +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
             C  +    +  QIHG +I+T  S   ++ +SLI  Y   G +D++    N  +   + 
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W +M+      G++ EA+++F  +  +  + +E     ++ +C++IG+ ++ K +H  +
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           I  G   +++  +A+ID YAKCGD+  A   F ++ +S  ++ ++++I AY  HG +  A
Sbjct: 532 IISGLK-DLFTDTALIDMYAKCGDLNAAETVF-RAMSSRSIVSWSSMINAYGMHGRIGSA 589

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +  F++M  +  +P++  F++V+SAC H G V++G   F  M S +G+ P+ + + C +D
Sbjct: 590 ISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFID 648

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +LSR+G L++A   I+ MPF    +V+ SL++GCRIH   ++ +     L  ++  +   
Sbjct: 649 LLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGY 708

Query: 756 HVLLS 760
           + LLS
Sbjct: 709 YTLLS 713



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 7/285 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA S+S  EN     LG Q+HGH+++   +++ F+QN+LI MYSK G      
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSAS 459

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+++  R++V+W  ++    QNG     + ++  M  +    NE    +V++ C S+G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + E G  +H   L I   K+ F   ++++ YAK GD+ AAE VF ++SS  +  W++MI 
Sbjct: 520 SLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y   G    A++  + M+  G   ++  F+N L  C      + G+    L+    V  
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSP 638

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGG 321
           +       ID+  +S  +  A++  + M   AD  V  W +L  G
Sbjct: 639 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNG 681


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 189/727 (25%), Positives = 359/727 (49%), Gaps = 30/727 (4%)

Query: 56  NLKSRVLGTQVHGHIV--KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
            L++   G ++H HI+  ++   N  FL ++LI M++KCG       + D  A  ++ S 
Sbjct: 55  RLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALADRFA--SVYSC 112

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           T ++ A +++G  D  ++++  M+     PN  A+ +++  C  +G    G  IH     
Sbjct: 113 TAMIRAWMEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAAGRRIHSQISD 169

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIGGYAHCGYGFEA 230
              E+N  +G ++++ Y+K G +  A++ F  +   S  DV  WNAMI  +   G   EA
Sbjct: 170 RDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREA 229

Query: 231 LNVVSSMLFEGITM-DKYTFINALQGC---SLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           L +   M  +G    +  TF++ L  C    L++  D+ R IHG I+ + +E    +  A
Sbjct: 230 LQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDV-RAIHGRIVGAGIEREAFVRTA 288

Query: 287 LIDMYIKSSGMDYAFKVFERMADKD----VISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           L+D Y K   +D A++VF R  D++    +++ + +     +N  P ++  LF    L G
Sbjct: 289 LVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEG 348

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMA 401
           ++P+ VT   +L  C  L        +   A+       +NV  ++L+  + R   +  A
Sbjct: 349 TKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLPRA 408

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            + FD +   ++ +WN + + Y  +    + L  F  +   GV  +  TF   +  C   
Sbjct: 409 RATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAY 468

Query: 462 ENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMA 515
             Q       +I   + + G      + ++ +  Y   G L ++   FE  + A R D  
Sbjct: 469 PPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARR-DCI 527

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           +W +M++A  H G   EA  +F ++  E   KP++     +L++  +  +  + + IH  
Sbjct: 528 TWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHAR 587

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF-NSNDVIVYNTLIMAYAHHGLVS 633
           V+  GF ++  + +A+++ YAKCG +  A+  FD+S  N  DVI + +LI  YA +G   
Sbjct: 588 VVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAE 647

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
            A+++F  M+   ++P+  TF+S ++AC+H G +++GC L   M   +G+ P+   + C+
Sbjct: 648 RALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCI 707

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R G L++A+ ++E    Q     + +LL  C+     E GE  +E+++ L P+  
Sbjct: 708 VDLLGRCGRLDEAEKLLE-RTSQADVITWMALLDACKNSKELERGERCAERIMQLDPEVA 766

Query: 754 AAHVLLS 760
           +++++L+
Sbjct: 767 SSYIVLA 773



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 56/275 (20%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           ++  ++ + +     L  S +  S   G ++H  +V  GF +D  +QN L+ MY+KCG  
Sbjct: 554 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 613

Query: 96  GWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                +FD+ +  + ++++WT +++   Q G+ +  LK++  M+  G  PN     S + 
Sbjct: 614 DDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALT 673

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCS-----VLNFYAKLGDVAAAERVFYSISS 208
            C   G  E G    C  L      +  +  S     +++   + G +  AE++    S 
Sbjct: 674 ACNHGGKLEQG----CELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQ 729

Query: 209 DDVGCWNAMIGG----------------------------------YAHCGYGFEALNVV 234
            DV  W A++                                    YA  G   EA  + 
Sbjct: 730 ADVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIR 789

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
            +ML +GI  D         GCS V   ++ +++H
Sbjct: 790 KTMLDKGIRADP--------GCSAV---EVNQELH 813


>gi|242065278|ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
 gi|241933759|gb|EES06904.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 183/711 (25%), Positives = 333/711 (46%), Gaps = 30/711 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           +R D    + +L     + S  LG Q+HG + KLG+   D+F+ N L+ MYS C      
Sbjct: 112 VRPDAFVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCA 171

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VF  +   +LVSWT ++SA  +NG     L ++++M  +G   + F +   ++   S+
Sbjct: 172 EKVFGSITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAASSL 231

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G    G+ +HC  +K+ +    F+   ++ FY + G++     VF  ++  D+  WN +I
Sbjct: 232 GHVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNTII 291

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      EA     +M+FE    D++T  + L   +    F  G +IHG +IR+ ++
Sbjct: 292 QCYAENLCHEEASAHFRAMMFEFAECDEFTLGSILHVVTATGAFGHGMEIHGYLIRAGLD 351

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               +++ALIDMY+  + +   ++VF     K  +   T+ G   +             F
Sbjct: 352 SDKHVMSALIDMYVNWATLHKRYRVFPLRMLKYYL---TVQGKLDQ-------------F 395

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           I++ S          L+ C   LDL  G  L    L      +  VTSSL+ M+ +CGA+
Sbjct: 396 IVASS----------LKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGAL 445

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           E ++ +F          W+  +SG C N      +  F  +    V+ N  T+  ++  C
Sbjct: 446 EESNMLFSRTKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILTAC 505

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
               +     +IH   I++G+ +   +  SLI  Y+  G+   + +        D+ SW 
Sbjct: 506 MALGDTDSGMEIHSNSIRSGYGTNTSVLKSLITFYLRQGRYHQALKLCLALSNHDI-SWD 564

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            ++ +     H+   V +FH +   G   D +    IL+SC  +G  +     H ++ K 
Sbjct: 565 TLVESFSQVDHHVGIVNLFHVIQRCGANLDYHTARLILSSCGKLGLLEEGLQAHAYMTKR 624

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G  +     S +ID Y+ CG ++ A  AF+      D   + +++ A   +G    A+ +
Sbjct: 625 GLASTACTNSYLIDMYSSCGSLRHAFDAFNY-MPDKDASSWTSIVAANVENGCPETAIRL 683

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F +M+    +P+   F+SV+ AC+  GLV++    F SM   Y +QPS + Y  ++++LS
Sbjct: 684 FSQMQKEKCRPTPEAFLSVLKACARTGLVNEAFRFFASMTEVYKIQPSEEHYSHMIEVLS 743

Query: 699 RNGYLEDAKHVIE-IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
           R G  ++A+H I+ ++P +   + +  L +  + +GN +  + A ++L  L
Sbjct: 744 RAGMFKEAEHFIDSVVPSESGASAWSLLCAAAKQNGNDKTVKLAGDRLARL 794



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 234/506 (46%), Gaps = 31/506 (6%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           S+L  + + G +  A  VF ++      +  W  ++ GYA  G   EAL ++  ML   +
Sbjct: 53  SLLRAHVRAGRMRPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEALELLLCMLGLLV 112

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAF 301
             D + F  AL+ C+ V    +GRQ+HG + +   V   + + N L+ MY     +  A 
Sbjct: 113 RPDAFVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRCAE 172

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           KVF  +   D++SW ++   ++EN    +   LF +    G   +  T S+ LR    L 
Sbjct: 173 KVFGSITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAASSLG 232

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + LG QL C  +  G + +E + + LI  + R G +++  +VFD ++ K++ +WN ++ 
Sbjct: 233 HVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNTIIQ 292

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  N C  +    F  +     E +  T   ++     +       +IHG +I+ G  S
Sbjct: 293 CYAENLCHEEASAHFRAMMFEFAECDEFTLGSILHVVTATGAFGHGMEIHGYLIRAGLDS 352

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ S+LI  YVN+                          A +H+ +    + +    +
Sbjct: 353 DKHVMSALIDMYVNW--------------------------ATLHKRYRVFPLRMLKYYL 386

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
               K D++I+ + L SCA+       + +H  ++K   N + +V S+++D YAKCG ++
Sbjct: 387 TVQGKLDQFIVASSLKSCASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCGALE 446

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            + M F ++ N     V++  I     +G    A+ +F +M+  ++QP++ T+ ++++AC
Sbjct: 447 ESNMLFSRTKNPGTA-VWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILTAC 505

Query: 662 SHKGLVDKGCLLFK-SMDSQYGMQPS 686
              G  D G  +   S+ S YG   S
Sbjct: 506 MALGDTDSGMEIHSNSIRSGYGTNTS 531



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 152/645 (23%), Positives = 270/645 (41%), Gaps = 50/645 (7%)

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAER--NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           Q +L+  + + G       VFD M +R  +LV+WT ++S    +G     L++ + M   
Sbjct: 51  QLSLLRAHVRAGRMRPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEALELLLCMLGL 110

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLGDVAA 198
              P+ F     ++ C ++G+   G  +H    K+  +  + FV   ++  Y+    +  
Sbjct: 111 LVRPDAFVFSVALRACAAVGSLGLGRQLHGAVAKLGYVGADLFVANGLVTMYSSCQSLRC 170

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           AE+VF SI+S D+  W +M+  Y   G   EAL +   M  +GI  D +T   AL+  S 
Sbjct: 171 AEKVFGSITSPDLVSWTSMLSAYTENGCDAEALMLFMEMARDGIACDAFTLSVALRAASS 230

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           +    +G Q+H  +I+  +     + N LI  Y +S  +     VF+ M  KD++SWNT+
Sbjct: 231 LGHVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNTI 290

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
              ++EN    + ++ F   +   +  +  T   +L           G+++    +  G 
Sbjct: 291 IQCYAENLCHEEASAHFRAMMFEFAECDEFTLGSILHVVTATGAFGHGMEIHGYLIRAGL 350

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +++V S+LI M+     +   + VF     K   T    L  +      A  LK+   
Sbjct: 351 DSDKHVMSALIDMYVNWATLHKRYRVFPLRMLKYYLTVQGKLDQFIV----ASSLKS--- 403

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFG 497
                               C S    + G+ +H  I+K+  +   ++ SSL+  Y   G
Sbjct: 404 --------------------CASGLDLVAGRMLHACILKSNMNPDSFVTSSLVDMYAKCG 443

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            L+ S    +  +    A W A +S     G    AV +F  +     +P+E+    IL 
Sbjct: 444 ALEESNMLFSRTKNPGTAVWSAAISGNCLNGQYGRAVHLFRRMQSEHVQPNEFTYTAILT 503

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN----- 612
           +C A+G       IH   I+ G+ T   V  ++I  Y + G        + Q+       
Sbjct: 504 ACMALGDTDSGMEIHSNSIRSGYGTNTSVLKSLITFYLRQGR-------YHQALKLCLAL 556

Query: 613 SNDVIVYNTLIMAYA---HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           SN  I ++TL+ +++   HH  +     +  +   ANL    A    ++S+C   GL+++
Sbjct: 557 SNHDISWDTLVESFSQVDHHVGIVNLFHVIQRCG-ANLDYHTARL--ILSSCGKLGLLEE 613

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           G      M ++ G+  +      L+DM S  G L  A      MP
Sbjct: 614 GLQAHAYM-TKRGLASTACTNSYLIDMYSSCGSLRHAFDAFNYMP 657


>gi|302142721|emb|CBI19924.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 173/607 (28%), Positives = 311/607 (51%), Gaps = 36/607 (5%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K   +  A  +F  +   D G WNAMI  YA  G   +AL + S M   GI  ++ TF
Sbjct: 105 YGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQGGCAEKALWLFSRMNRLGIWANEITF 164

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L  C+ V    + +QIHGLI++     ++ + ++L+D+Y K   M  A ++F+ + +
Sbjct: 165 ASVLGSCATVLALFLSKQIHGLIVKYGFCWNVILGSSLVDIYGKCRVMSDARRMFDEIEN 224

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            + ISWN +   + E  N  +   +F K I +  RP + TFS  L  C  +  L  G+Q+
Sbjct: 225 PNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANIRPLNFTFSNALIACSSISALQEGIQI 284

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN--C 427
             +A+  G+ ++E V+SSLI M+ +CG +E A  +F+  S KN+ +W  ++SGY  +   
Sbjct: 285 HGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACRIFELPSSKNLISWTSIVSGYAMSGQT 344

Query: 428 CDADVL-------------------KTFCNIWESGVE-----------VNGCTFFYVVET 457
            +A VL                     FC  WE  +E           ++  T   ++  
Sbjct: 345 REARVLFDEMPERSVISWNAMLAGYTHFCQ-WEEALEFVFLMRKATQDIDHVTVGLILNV 403

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMAS 516
           C    + +   Q+HG I + G  S  ++ ++L+  Y   G L ++   F   +   D  S
Sbjct: 404 CAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHMYGKCGNLRSTRLWFYQMSHWRDRIS 463

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W A++++    G + EA+TIF  + +    P ++ LGT+L++CA I A ++ K IH F+I
Sbjct: 464 WNALLTSHARHGLSEEAMTIFGEM-QWETTPSKFTLGTLLSACANIFALEQGKQIHGFMI 522

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           + G+  +V    A++D Y+KC  ++ A   F ++  S D+I++N++I+   H+G   + +
Sbjct: 523 RNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA-PSRDLILWNSMILGCCHNGRGRDVL 581

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F  M+   ++P   TF  ++  C  +GL   G   F SM ++Y + P  + Y  ++++
Sbjct: 582 GLFGLMEEEGVKPDHITFQGILLGCICEGLAGLGTEYFNSMSNKYCIIPRLEHYESMIEL 641

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
             R+G++++ +  I+ MPF+P+  +   + + C  HG+  LG+WA+E+L  L P      
Sbjct: 642 YGRHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHF 701

Query: 757 VLLSKRK 763
            +L + +
Sbjct: 702 QILDRSR 708



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 161/689 (23%), Positives = 284/689 (41%), Gaps = 78/689 (11%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V   +V  H++       IFL N  I  Y KC        +F+EM +R+  SW  +++A 
Sbjct: 77  VEARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAY 136

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G  +  L ++  M   G   NE    SV+  C ++ A      IH   +K     N 
Sbjct: 137 AQGGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNV 196

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +G S+++ Y K   ++ A R+F  I + +   WN ++  Y   G   EA+ +   M+  
Sbjct: 197 ILGSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRA 256

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I    +TF NAL  CS ++    G QIHG+ IR   +    + ++LIDMY K   ++ A
Sbjct: 257 NIRPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESA 316

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF----------ILSG-------- 342
            ++FE  + K++ISW ++  G++ +    +   LF +           +L+G        
Sbjct: 317 CRIFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWE 376

Query: 343 -------------SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
                           +HVT  ++L  C  L D++ G Q+       G      V ++L+
Sbjct: 377 EALEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALL 436

Query: 390 YMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVN 447
           +M+ +CG +      F  +S +++  +WN LL+ +  +    + +  F  + WE+    +
Sbjct: 437 HMYGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET--TPS 494

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C      +   QIHG +I+ G+        +L+  Y     L+ + +   
Sbjct: 495 KFTLGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFK 554

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
            A   D+  W +M+    H G   + + +F  + E G KPD      IL  C   G    
Sbjct: 555 EAPSRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGL--- 611

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
                      G  TE +  +++ + Y     ++                 Y ++I  Y 
Sbjct: 612 ----------AGLGTEYF--NSMSNKYCIIPRLEH----------------YESMIELYG 643

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG + E  +   +M     +P+ A    V +ACS  G    G    + ++    + PS 
Sbjct: 644 RHGFMDELEDFIKRMP---FEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNE---LNPST 697

Query: 688 DCYGCLVDMLSRNGY-----LEDAKHVIE 711
             +  ++D  SRN Y     +ED    +E
Sbjct: 698 PFHFQILDR-SRNLYHRCIPMEDHSDAVE 725



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 223/496 (44%), Gaps = 34/496 (6%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R++   +I       I ++N  I+ Y K S +D A ++FE M  +D  SWN +   +++
Sbjct: 79  ARKVESHLITFSPAPPIFLLNRAIETYGKCSCLDDARELFEEMPQRDGGSWNAMITAYAQ 138

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
                +   LF +    G   N +TF+ +L  C  +L L L  Q+  L +  GF     +
Sbjct: 139 GGCAEKALWLFSRMNRLGIWANEITFASVLGSCATVLALFLSKQIHGLIVKYGFCWNVIL 198

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            SSL+ ++ +C  +  A  +FD +   N  +WN ++  Y     + + +  F  +  + +
Sbjct: 199 GSSLVDIYGKCRVMSDARRMFDEIENPNAISWNVIVRRYLEMGNEKEAVVMFFKMIRANI 258

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
                TF   +  C      Q   QIHG  I+ G+     + SSLI  Y   G L+++  
Sbjct: 259 RPLNFTFSNALIACSSISALQEGIQIHGVAIRIGYDEDEVVSSSLIDMYAKCGDLESACR 318

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE---------------------- 542
                   ++ SW +++S     G   EA  +F  + E                      
Sbjct: 319 IFELPSSKNLISWTSIVSGYAMSGQTREARVLFDEMPERSVISWNAMLAGYTHFCQWEEA 378

Query: 543 ---------AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
                    A +  D   +G ILN CA +   +  K +H F+ + G  + ++V +A++  
Sbjct: 379 LEFVFLMRKATQDIDHVTVGLILNVCAGLSDVESGKQVHGFIYRHGLYSNLFVGNALLHM 438

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y KCG+++  R+ F Q  +  D I +N L+ ++A HGL  EAM IF +M+     PS+ T
Sbjct: 439 YGKCGNLRSTRLWFYQMSHWRDRISWNALLTSHARHGLSEEAMTIFGEMQWET-TPSKFT 497

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             +++SAC++   +++G  +   M  + G +      G LVDM S+   LE A  V +  
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFM-IRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEA 556

Query: 714 PFQPSPTVYRSLLSGC 729
           P +    ++ S++ GC
Sbjct: 557 PSR-DLILWNSMILGC 571



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS   N+ +   G Q+HG +++ G+  D+  +  L+ MYSKC    + L+VF E  
Sbjct: 498 LGTLLSACANIFALEQGKQIHGFMIRNGYEIDVVARGALVDMYSKCRCLEYALKVFKEAP 557

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
            R+L+ W  ++     NG     L ++  M+  G  P+      ++  C+  G +  G
Sbjct: 558 SRDLILWNSMILGCCHNGRGRDVLGLFGLMEEEGVKPDHITFQGILLGCICEGLAGLG 615


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 285/545 (52%), Gaps = 3/545 (0%)

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           M+GG+A  G           ++  G   D YT    ++ C  + +  +GR IH ++ +  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           ++    +  AL+DMY+K   ++ A  +F++M ++D+++W  + GG++E     ++  LF 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           K    G  P+ V    ++  C KL  +     +        F  +  + +++I M+ +CG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            VE A  +FD +  KN+ +W+ +++ Y ++      L  F  +  SG+  +  T   ++ 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMA 515
            C   +N QM   IH  + K G     ++C++L+  Y    +++++ F F    ER D+ 
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DLV 299

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           +W  M+      G+ +E++ +F  + E G  PD+  + T++ +CA +GA  + ++I  ++
Sbjct: 300 TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI 359

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            +  F  +V + +A+ID +AKCG ++ AR  FD+    N VI ++ +I AY +HG   +A
Sbjct: 360 QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKN-VISWSAMIAAYGYHGQGRKA 418

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++F  M  + + P++ T VS++ ACSH GLV++G   F  M   Y ++     Y C+VD
Sbjct: 419 LDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVD 478

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           +L R G L++A  +IE M  +    ++ + L  CR H +  L E A+  LL L P+N   
Sbjct: 479 LLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGH 538

Query: 756 HVLLS 760
           ++LLS
Sbjct: 539 YILLS 543



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 246/527 (46%), Gaps = 27/527 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   L   +    +LK+  +G  +H  + K G   D F+   L+ MY KC        
Sbjct: 27  RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARF 86

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +FD+M ER+LV+WT+++    + G+ +  L ++  M+  G +P++ A+ +V+  C  +GA
Sbjct: 87  LFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGA 146

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
                 I  +  + + + +  +G ++++ YAK G V +A  +F  +   +V  W+AMI  
Sbjct: 147 MHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y + G G +AL++   ML  G+  DK T  + L  CS + +  +GR IH ++ +  ++  
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLD 266

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             +  AL+DMY K   ++ A  +F++M ++D+++W  + GG++E  N  ++  LF K   
Sbjct: 267 HFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMRE 326

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  P+ V    ++  C KL  +     +        F  +  + +++I M  +CG VE 
Sbjct: 327 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVES 386

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  +FD +  KN+ +W+ +++ Y ++      L  F  +  SG+  N  T   ++  C  
Sbjct: 387 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS- 445

Query: 461 SENQQMVGQIHGAIIKTGFSSCG-----YICSSLIKSYV-------NFGQLDNSFEF--S 506
                     H  +++ G          Y   + +K Y          G+LD + +   S
Sbjct: 446 ----------HAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIES 495

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYIL 552
              E+ D   WGA + A         A     SL+E   + P  YIL
Sbjct: 496 MTVEK-DEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYIL 541



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/578 (23%), Positives = 263/578 (45%), Gaps = 44/578 (7%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P+ + +  V++ C  +   + G  IH    K  ++ + FV  ++++ Y K  ++  A
Sbjct: 25  GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 84

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             +F  +   D+  W  MIGGYA CG   E+L +   M  EG+  DK   +  +  C+ +
Sbjct: 85  RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 144

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
                 R I   I R + +  + +  A+IDMY K   ++ A ++F+RM +K+VISW+ + 
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             +  +    +   LF   + SG  P+ +T + LL  C  L +L +G  +  +    G  
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD 264

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY--CFNCCDADVLKTFC 437
            +  V ++L+ M+ +C  +E A  +FD +  +++ TW  ++ GY  C N  ++ VL  F 
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVL--FD 322

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            + E GV  +      VV  C +         I   I +  F     + +++I  +   G
Sbjct: 323 KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 382

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            ++++ E  +  E  ++ SW AM++A  + G   +A+ +F  ++ +G  P++  L ++L 
Sbjct: 383 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +C+           H  +++ G        S + + Y+   D+K                
Sbjct: 443 ACS-----------HAGLVEEGLR----FFSLMWEDYSVRADVKH--------------- 472

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKS 676
            Y  ++      G + EA+++ + M    ++  +  + + + AC +HK +V    L  K+
Sbjct: 473 -YTCVVDLLGRAGRLDEALKLIESM---TVEKDEGLWGAFLGACRTHKDVV----LAEKA 524

Query: 677 MDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             S   +QP +P  Y  L ++ +  G  ED     ++M
Sbjct: 525 ATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLM 562


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 166/621 (26%), Positives = 299/621 (48%), Gaps = 2/621 (0%)

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           F P+     ++++ C S    + G  +H        E+N  V   ++  YA+ G V  A+
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF  +   DV  W  MIG Y   G    AL +   M  E +   K T++  L  C+   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               G +IHG I++   E  + +  ALI+MY K   +  A+  F+R+  +DV+SW  +  
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
              ++        L+ +  L G  PN +T   +    G    L  G  +  L        
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMES 240

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V +S + MF   G +  A  +F+++  +++ TWN +++ Y  N    + ++ F  + 
Sbjct: 241 DVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQ 300

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           + G++ N  TF  ++       +      IH  + + G+     + ++L+  Y       
Sbjct: 301 QDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPG 360

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +++        D+ +W  M  A    G   EA+ +F  +   G +P    L  +L++CA
Sbjct: 361 QAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCA 420

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + A Q+ + IH  +I+ GF  E+ V +A+I+ Y KCG +  AR  F++     D++V+N
Sbjct: 421 HLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEK-MAKRDILVWN 479

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           +++ AYA HG   E +++F++M+L   +    +FVSV+SA SH G V  G   F +M   
Sbjct: 480 SMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQD 539

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKH-VIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           + + P+P+ YGC+VD+L R G +++A   V+++    P   ++ +LL  CR H   +  +
Sbjct: 540 FSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAK 599

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
            A+E++L   P +  A+V+LS
Sbjct: 600 AAAEQVLERDPSHSGAYVVLS 620



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/603 (24%), Positives = 270/603 (44%), Gaps = 12/603 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + D  F    L    + K+   G +VH H+   GF  +  +  +LI MY++CG      
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF+ +  +++ +WT ++    Q G++D  L M+  M+    MP +    +++  C S  
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + + G  IH   L+   E + FVG +++N Y K G V  A   F  +   DV  W AMI 
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIA 180

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLIIRSE 276
                     A  +   M  +G+  +K   YT  NA      +++   G+ I+ L+    
Sbjct: 181 ACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSE---GKFIYSLVSSRV 237

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +E  + ++N+ ++M+  +  +  A ++FE M D+DV++WN +   + +N+N G+   LF 
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +    G + N +TF ++L     L  L  G  +  L    G+  +  V ++L+ ++ RC 
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCE 357

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A   A  +F ++  K++ TW  +   Y  N    + L+ F  +   G      T   V++
Sbjct: 358 APGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLD 417

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           TC      Q   QIH  II+ GF     + ++LI  Y   G++  +        + D+  
Sbjct: 418 TCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILV 477

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M+ A    G+  E + +F+ +   GEK D     ++L++ +  G+   T     FV 
Sbjct: 478 WNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSV--TDGYQYFVA 535

Query: 577 KL---GFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            L          +   V+D   + G I+ A  +    S    D I++ TL+ A   H   
Sbjct: 536 MLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKT 595

Query: 633 SEA 635
            +A
Sbjct: 596 DQA 598


>gi|125570343|gb|EAZ11858.1| hypothetical protein OsJ_01732 [Oryza sativa Japonica Group]
          Length = 920

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 185/696 (26%), Positives = 329/696 (47%), Gaps = 14/696 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H ++   G   D+ L + +++ Y+  G       VF ++   ++  W   +    + G
Sbjct: 66  KIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRAG 125

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + +Y  +K N    N   +  VMK C  +     G  +H  +LK+ +  N FVG 
Sbjct: 126 YPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVGS 185

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC--GYGFEALNVVSSMLFEGI 242
           S++  Y+K      +  VF  I + D+  + +MI GY+       + A  + + ML   +
Sbjct: 186 SLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWNAFEIATDMLQNNL 245

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAF 301
            +++ T ++ LQ    +     G+ +H   IR  +  S  I+  ++++ Y +      A 
Sbjct: 246 EVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAA 305

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQT--ASLFHKFILSGSR--PNHVTFSILLRQC 357
            V +  +   V SWN L  G +     GQ+  A  +   +L   +  P+ VTF+ +L  C
Sbjct: 306 TVLQN-SKGTVASWNALLSGLNR---AGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +L        +    +      +  +T++LI ++ +C  V  +  +FD +  K++ ++N
Sbjct: 362 AELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYN 421

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++ GY  N    +       +   GV  +  T   ++       +      IHG  I+ 
Sbjct: 422 AMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRH 481

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           GF S   + + ++  Y   G++  +    +  E+ ++ SW AMM   +  GH  E V +F
Sbjct: 482 GFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLF 541

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             + + GEKPD   L T + + + +G     K IH FV +     +   A+++I AYAKC
Sbjct: 542 QVMQKYGEKPDSVSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKC 601

Query: 598 GDIK-GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           G +   A + F   + + D   +N +I AYA HG     +E+F +M+  N+QP + TF +
Sbjct: 602 GKLDLSAGLFFSLKYRNLDT--WNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFST 659

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V++ACSH GLV  G  +F SM S Y + P  + YGC+VD+L R G+LED    I++   +
Sbjct: 660 VLTACSHAGLVKDGWRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLK 719

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
              T++ +LLS CR HGN  L    S++LL   P+N
Sbjct: 720 DKSTIFCALLSACRTHGNTRLAHAISKELLEHGPQN 755



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/527 (25%), Positives = 256/527 (48%), Gaps = 10/527 (1%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           K   F+ KS +    LK+  LG  VH   +KL  + + F+ ++LI +YSK         V
Sbjct: 147 KTITFVMKSCT---ELKNLYLGKGVHADSLKLALSGNKFVGSSLIGLYSKFSKTNDSRGV 203

Query: 102 FDEMAERNLVSWTLIV---SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           F+E+  +++V++T ++   S  + +  ++   ++  DM  N    N   + S++++  ++
Sbjct: 204 FEEIINKDIVAYTSMITGYSETVDSIAWN-AFEIATDMLQNNLEVNRVTLVSLLQIAGNL 262

Query: 159 GASEFGYSIHCFALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           GA + G S+HC++++  I   +  +  S++NFY + G   +A  V  + S   V  WNA+
Sbjct: 263 GALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQN-SKGTVASWNAL 321

Query: 218 IGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           + G    G  F A+  +  ML E  +T D  TF N L  C+ +  F     IH   IR  
Sbjct: 322 LSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRF 381

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +   + +  ALI++Y K + +  +  +F+++  KDV+S+N +  G+ +N    +  SL +
Sbjct: 382 IPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLN 441

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
             +  G  P+  T   LL       DL  G  +   A+  GF  + +V + ++YM+  CG
Sbjct: 442 YMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACG 501

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            +  A ++FD++  KN+ +W  ++ G   N    +V++ F  + + G + +  +    V+
Sbjct: 502 KIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQ 561

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                 +   + QIH  + ++         +SLI +Y   G+LD S       +  ++ +
Sbjct: 562 AVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDT 621

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           W AM+SA    G +   + +F  + E   +PDE    T+L +C+  G
Sbjct: 622 WNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAG 668



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 99/490 (20%), Positives = 217/490 (44%), Gaps = 17/490 (3%)

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           QGC   AD    ++IH  +    +   + + + ++  Y     +  +  VF+++ + D+ 
Sbjct: 56  QGC---ADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDIS 112

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
            WN+    +     P +   L+ +  L+    N  T + +++ C +L +L LG  +   +
Sbjct: 113 LWNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADS 172

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY--CFNCCDAD 431
           L       + V SSLI ++ +      +  VF+ +  K+I  +  +++GY    +    +
Sbjct: 173 LKLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWN 232

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC-SSLI 490
             +   ++ ++ +EVN  T   +++        Q    +H   I+        I  +S++
Sbjct: 233 AFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIV 292

Query: 491 KSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEK 546
             Y   G   ++    + S G     +ASW A++S L   G +  A+     ++ E    
Sbjct: 293 NFYTRCGAYQSAATVLQNSKGT----VASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVT 348

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           PD      +L++CA +  +    SIH + I+     +V + +A+I+ Y KC  +  ++  
Sbjct: 349 PDSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYL 408

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           FDQ     DV+ YN +I  Y  + + +EA  + + M    + P  AT +S+++A + +  
Sbjct: 409 FDQLI-IKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRD 467

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           + +G  +      ++G     D    ++ M S  G +  A+ + + +  + +   + +++
Sbjct: 468 LVRGRWI-HGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLE-KKNLVSWTAMM 525

Query: 727 SGCRIHGNKE 736
            GC  +G+ +
Sbjct: 526 KGCLSNGHAD 535


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 198/721 (27%), Positives = 344/721 (47%), Gaps = 42/721 (5%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMP-NEFAVGSVMKVCVS 157
           ++FD + +   V W  I+   I N      L  Y  MK T  F   + +   S +K C  
Sbjct: 60  QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAE 119

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE----------RVFYSIS 207
               + G ++HC  ++     +  V  S++N Y    +   +E          +VF ++ 
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMR 179

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             +V  WN +I  Y   G   EA    + M+   I     +F+N     +          
Sbjct: 180 RKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANV 239

Query: 268 IHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
            +GL+++   E    + +V++ I MY +   ++ + +VF+   ++++  WNT+ G + +N
Sbjct: 240 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQN 299

Query: 326 KNPGQTASLFHKFILSGSRP---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
               ++  LF + I  GS+    + VTF +       L  ++LG Q        GF+ + 
Sbjct: 300 DCLVESIELFLEAI--GSKEIVSDEVTFLLAASAVSGLQQVELGRQFH------GFVSKN 351

Query: 383 ------NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
                  + +SL+ M+ RCG V+ +  VF ++  +++ +WN ++S +  N  D + L   
Sbjct: 352 FRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLV 411

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             + + G +++  T   ++       N+++  Q HG +I+ G    G + S LI  Y   
Sbjct: 412 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG-MNSYLIDMYAKS 470

Query: 497 GQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
           G +  S   FE S  AER D A+W +M+S     GH  E   +F  ++E   +P+   + 
Sbjct: 471 GLIRISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVA 529

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +IL +C+ +G+    K +H F I+   +  V+VASA++D Y+K G IK A   F Q+   
Sbjct: 530 SILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKER 589

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           N V  Y T+I+ Y  HG+   A+ +F  M+   ++P    FV+V+SACS+ GLVD+G  +
Sbjct: 590 NSV-TYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS-PTVYRSLLSGCRIH 732
           F+ M   Y +QPS + Y C+ DML R G + +A   ++ +  + +   ++ SLL  CR+H
Sbjct: 649 FEDMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLH 708

Query: 733 GNKELGEWASEKLLLLLP-KNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLE 791
           G  EL E  SE+L  L   KN + + +L       E N    + V  V  G++   LK E
Sbjct: 709 GELELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNW---KSVDRVRKGMREKGLKKE 765

Query: 792 L 792
           +
Sbjct: 766 V 766



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/531 (25%), Positives = 253/531 (47%), Gaps = 21/531 (3%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC--------GYFGWGL- 99
           K+ + ++NLK+   G  VH H+++    +   + N+L+ MY  C          F + + 
Sbjct: 115 KACAETKNLKA---GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVV 171

Query: 100 -RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VFD M  +N+V+W  ++S  ++ G      + +  M      P+  +  +V     + 
Sbjct: 172 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATS 231

Query: 159 GASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            + +     +   LK+  E  K+ FV  S ++ YA+LGD+ ++ RVF S    ++  WN 
Sbjct: 232 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNT 291

Query: 217 MIGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           MIG Y       E++ + + ++  + I  D+ TF+ A    S +   ++GRQ HG + ++
Sbjct: 292 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKN 351

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             E  I I+N+L+ MY +   +  +F VF  M ++DV+SWNT+   F +N    +   L 
Sbjct: 352 FRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLV 411

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           ++    G + +++T + LL     L + ++G Q     +  G +  E + S LI M+ + 
Sbjct: 412 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQG-IQFEGMNSYLIDMYAKS 470

Query: 396 GAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           G + ++  +F+   Y  ++  TWN ++SGY  N    +    F  + E  +  N  T   
Sbjct: 471 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVAS 530

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERL 512
           ++  C +  +  +  Q+HG  I+       ++ S+L+  Y   G +  +   FS   ER 
Sbjct: 531 ILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKER- 589

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +  ++  M+      G    A+++F S+ E G KPD      +L++C+  G
Sbjct: 590 NSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSG 640



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 148/567 (26%), Positives = 255/567 (44%), Gaps = 28/567 (4%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG--ITMDKYTFIN 251
           G+   A ++F +I       WN +I G+       EAL   S M         D YT+ +
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI---KSSG-------MDYAF 301
            L+ C+   +   G+ +H  +IR     S  + N+L++MY+    + G        D   
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-----SILLRQ 356
           KVF+ M  K+V++WNTL   + +     +    F   +    +P+ V+F     ++   +
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             K  ++  GL L+   L   ++ +  V SS I M+   G +E +  VFD+   +NI  W
Sbjct: 233 SIKKANVFYGLMLK---LGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVW 289

Query: 417 NELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           N ++  Y  N C  + ++ F   I    +  +  TF          +  ++  Q HG + 
Sbjct: 290 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVS 349

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K        I +SL+  Y   G +  SF   +     D+ SW  M+SA V  G + E + 
Sbjct: 350 KNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLM 409

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           + + + + G K D   +  +L++ + +   +  K  H F+I+ G   E  + S +ID YA
Sbjct: 410 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE-GMNSYLIDMYA 468

Query: 596 KCGDIKGARMAFDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           K G I+ ++  F+ S +   D   +N++I  Y  +G   E   +F KM   N++P+  T 
Sbjct: 469 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTV 528

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            S++ ACS  G VD G  L      QY +  +      LVDM S+ G ++ A+++     
Sbjct: 529 ASILPACSQVGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAENMFSQTK 587

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWA 741
            + S T Y +++ G   HG   +GE A
Sbjct: 588 ERNSVT-YTTMILGYGQHG---MGERA 610



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 236/487 (48%), Gaps = 15/487 (3%)

Query: 67  HGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +G ++KLG  +  D+F+ ++ I+MY++ G      RVFD   ERN+  W  ++   +QN 
Sbjct: 241 YGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQND 300

Query: 125 EFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                ++++++ + +   + +E            +   E G   H F  K   E    + 
Sbjct: 301 CLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVII 360

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S++  Y++ G V  +  VF+S+   DV  WN MI  +   G   E L +V  M  +G  
Sbjct: 361 NSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFK 420

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           +D  T    L   S + + +IG+Q HG +IR  ++    + + LIDMY KS  +  + K+
Sbjct: 421 IDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKL 479

Query: 304 FE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           FE    A++D  +WN++  G+++N +  +T  +F K +    RPN VT + +L  C ++ 
Sbjct: 480 FEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVG 539

Query: 362 DLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +DLG QL   ++   +LD+   V S+L+ M+ + GA++ A ++F     +N  T+  ++
Sbjct: 540 SVDLGKQLHGFSIR-QYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMI 598

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIHGAIIKT 477
            GY  +      +  F ++ E G++ +   F  V+  C  S   +    + +    +   
Sbjct: 599 LGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNI 658

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMAS-WGAMMSALVHQGHNHEAVT 535
             SS  Y C + +   V  G+++ ++EF  G  E  ++A  WG+++ +    G    A T
Sbjct: 659 QPSSEHYCCITDMLGRV--GRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAET 716

Query: 536 IFHSLVE 542
           +   L +
Sbjct: 717 VSERLAK 723



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 169/331 (51%), Gaps = 7/331 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +    + S    L+   LG Q HG + K      I + N+L+ MYS+CG+      VF
Sbjct: 321 DEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVF 380

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ER++VSW  ++SA +QNG  D GL +  +M+  GF  +   V +++    ++   E
Sbjct: 381 HSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKE 440

Query: 163 FGYSIHCFALKIRIEKNPFVGCS--VLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMI 218
            G   H F ++  I+   F G +  +++ YAK G +  ++++F     +  D   WN+MI
Sbjct: 441 IGKQTHGFLIRQGIQ---FEGMNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMI 497

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
            GY   G+  E   V   ML + I  +  T  + L  CS V   D+G+Q+HG  IR  ++
Sbjct: 498 SGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLD 557

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ + +AL+DMY K+  + YA  +F +  +++ +++ T+  G+ ++    +  SLF   
Sbjct: 558 QNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 617

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
              G +P+ + F  +L  C     +D GL++
Sbjct: 618 QELGIKPDAIAFVAVLSACSYSGLVDEGLKI 648



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/299 (21%), Positives = 136/299 (45%), Gaps = 16/299 (5%)

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG--V 444
           S +   C+ G  ++A  +FD +       WN ++ G+  N    + L  +  + ++    
Sbjct: 44  SRLSKICQEGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN----FGQLD 500
           + +  T+   ++ C  ++N +    +H  +I+   +S   + +SL+  YV+     G   
Sbjct: 104 KCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSEL 163

Query: 501 NSFEFS------NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           + FE+       +   R ++ +W  ++S  V  G N EA   F  ++    KP       
Sbjct: 164 DCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVN 223

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
           +  + A   + ++    +  ++KLG  +  +++V S+ I  YA+ GD++ +R  FD    
Sbjct: 224 VFPAVATSRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVE 283

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIF-DKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            N + V+NT+I  Y  +  + E++E+F + +    +   + TF+   SA S    V+ G
Sbjct: 284 RN-IEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELG 341



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 64/128 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + + +A  L     + S  LG Q+HG  ++     ++F+ + L+ MYSK G   +  
Sbjct: 521 IRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 580

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +  ERN V++T ++    Q+G  +  + +++ M+  G  P+  A  +V+  C   G
Sbjct: 581 NMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSG 640

Query: 160 ASEFGYSI 167
             + G  I
Sbjct: 641 LVDEGLKI 648


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 185/644 (28%), Positives = 316/644 (49%), Gaps = 23/644 (3%)

Query: 125 EFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKIRIEK---NP 180
           EF        D   NG    E   V ++ + C ++ +++      C   ++ + K   N 
Sbjct: 33  EFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAK------CLHARLVVSKQIQNV 86

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS-MLF 239
            +   ++N Y  LG+VA A   F  I + DV  WN MI GY   G   E +   S  ML 
Sbjct: 87  CISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLS 146

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+T D  TF + L+ C  V D   G +IH L ++      + +  +LI +Y +   +  
Sbjct: 147 SGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQCG 358
           A  +F+ M  +D+ SWN +  G+ ++ N  +  +L      +G R  + VT   LL  C 
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACT 258

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +  D + G+ +   ++  G   E  V++ LI ++   G +     VFD +  +++ +WN 
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++  Y  N      +  F  +  S ++ +  T   +     +  + +    + G  ++ G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378

Query: 479 -FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
            F     I ++++  Y   G +D++    N     D+ SW  ++S     G   EA+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438

Query: 538 HSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           + + E GE   ++    ++L +C+  GA ++   +H  ++K G   +V+V +++ D Y K
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG ++ A   F Q    N V  +NTLI  +  HG   +A+ +F +M    ++P   TFV+
Sbjct: 499 CGRLEDALSLFYQIPRVNSV-PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++SACSH GLVD+G   F+ M + YG+ PS   YGC+VDM  R G LE A   I+ M  Q
Sbjct: 558 LLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P  +++ +LLS CR+HGN +LG+ ASE L  + P++   HVLLS
Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 157/653 (24%), Positives = 298/653 (45%), Gaps = 52/653 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  +V      ++ +   L+ +Y   G        FD +  R++ +W L++S   + G 
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 126 FDMGLKMY-VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               ++ + + M ++G  P+     SV+K C ++     G  IHC ALK     + +V  
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++ Y++   V  A  +F  +   D+G WNAMI GY   G   EAL + + +      M
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AM 245

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T ++ L  C+   DF+ G  IH   I+  +E  + + N LID+Y +   +    KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           +RM  +D+ISWN++   +  N+ P +  SLF +  LS  +P+ +T   L     +L D+ 
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365

Query: 365 LGLQLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
               +Q   L  G FL++  + ++++ M+ + G V+ A +VF+ +   ++ +WN ++SGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425

Query: 424 CFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
             N   ++ ++ +  + E G +  N  T+  V+  C ++   +   ++HG ++K G    
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ +SL   Y   G+L+++        R++   W  +++     GH  +AV +F  +++
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G KPD     T+L++C+                           S ++D    C ++  
Sbjct: 546 EGVKPDHITFVTLLSACS--------------------------HSGLVDEGQWCFEMMQ 579

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
                  S        Y  ++  Y   G +  A++    M   +LQP  + + +++SAC 
Sbjct: 580 TDYGITPSLKH-----YGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACR 631

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYG---CLVDMLSRNGYLEDAKHVIEI 712
             G VD G      + S++  +  P+  G    L +M +  G  E    +  I
Sbjct: 632 VHGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 221/478 (46%), Gaps = 24/478 (5%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           ++ + G ++H   +K GF  D+++  +LI +YS+    G    +FDEM  R++ SW  ++
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           S   Q+G     L +     +NG    +   V S++  C   G    G +IH +++K  +
Sbjct: 224 SGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E   FV   +++ YA+ G +   ++VF  +   D+  WN++I  Y        A+++   
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKS 294
           M    I  D  T I+     S + D    R + G  +R    +E  I+I NA++ MY K 
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKL 397

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSIL 353
             +D A  VF  + + DVISWNT+  G+++N    +   +++     G    N  T+  +
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C +   L  G++L    L  G   +  V +SL  M+ +CG +E A S+F  +   N 
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQ---QM 466
             WN L++ + F+      +  F  + + GV+ +  TF  ++  C  S    E Q   +M
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           +   +G         C      ++  Y   GQL+ + +F      + D + WGA++SA
Sbjct: 578 MQTDYGITPSLKHYGC------MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629


>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
 gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
          Length = 734

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/670 (24%), Positives = 325/670 (48%), Gaps = 13/670 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  + + G+ +  +L+  ++ MY+KCG        FDE+A++N   W L++S   +
Sbjct: 33  GRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIADKNDFVWNLMISGYAR 92

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRIEKNPF 181
           +G+    L+++  M      PN F   S +  C  +G  E G  IH   L+   I  +  
Sbjct: 93  SGKNREALELFHKMD---IPPNGFIFASALAACAGLGDLEQGREIHKRVLESPSIASDVV 149

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  YA+ G V    ++F ++   ++  WNAMI  +  C Y  +AL +   M  E 
Sbjct: 150 VQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRER 209

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  + + F + L  C+ + + ++G  IH  I    ++  I + NALI+MY K   MD A 
Sbjct: 210 LEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEAL 269

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF  +A +DV +W ++  G+++     +  + +         P   TF  LL  C  L 
Sbjct: 270 EVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTL- 328

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             + G  L       GF     V ++L++M+ RCG++E A  +F  +  K+  +W+ +++
Sbjct: 329 --EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVT 386

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +         L  F  +   G++++  TF   ++ C    + ++   I   I  +G   
Sbjct: 387 SHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDK 446

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I + L+ +Y   G ++ + +  +  E  D+ +W  M+     QG +  A+ +FH + 
Sbjct: 447 MDSIRADLVSAYSKCGDMEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMK 506

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDI 600
             G +PD     ++L +C+ +   +  + +H  ++   G     ++ + +I+ YA+CG +
Sbjct: 507 PEGVEPDSVTFSSVLQACSNL---EDGREVHARILAAQGGKMSDFLGNGLINMYARCGSM 563

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + AR  F +S + +  I ++ ++   A HG   + ++ +  M    + P   T ++++++
Sbjct: 564 RDARQIF-ESMDRSSRISWSAIMTLCARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNS 622

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GL D+ C  F  + S + +    + Y C+VD+L R G L++A+ +I ++  +P   
Sbjct: 623 CSHAGLTDEACHYFTWIISDFELPHLDEHYQCMVDLLCRAGRLDEAEELISMID-RPDVV 681

Query: 721 VYRSLLSGCR 730
              ++L+ C+
Sbjct: 682 TLNTMLAACK 691



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 277/585 (47%), Gaps = 14/585 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
             A +L+    L     G ++H  +++     +D+ +QN+L+ MY++CG    G+++FD 
Sbjct: 114 IFASALAACAGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDA 173

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  +NLVSW  ++SA +Q    +  L++Y  MK     PN F   S++  C S+G  E G
Sbjct: 174 MPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELG 233

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            SIH     + ++++  +  +++N Y+K G +  A  VF  +++ DV  W +MI GYA  
Sbjct: 234 SSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQL 293

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+G EA      M  + ++    TF+  L  CS +   + G+ +H  +     E    + 
Sbjct: 294 GFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVE 350

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            AL+ MY +   ++ A  +F +M  KD +SW+ +    ++  +PG+  +LF + IL G +
Sbjct: 351 TALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQ 410

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            +  TF   L+ C    D  L   ++ L    G    +++ + L+  + +CG +E A  +
Sbjct: 411 LSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKI 470

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +  +++ TW  ++ GY         L+ F  +   GVE +  TF  V++ C   E+ 
Sbjct: 471 FDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQACSNLEDG 530

Query: 465 QMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           +   ++H  I+   G     ++ + LI  Y   G + ++ +     +R    SW A+M+ 
Sbjct: 531 R---EVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSAIMTL 587

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGF 580
               G + + +  +  +V  G  PD   L  ILNSC+  G          ++I   +L  
Sbjct: 588 CARHGQHDDIIDTYRLMVNEGVVPDGVTLIAILNSCSHAGLTDEACHYFTWIISDFELPH 647

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
             E Y    ++D   + G +  A        +  DV+  NT++ A
Sbjct: 648 LDEHY--QCMVDLLCRAGRLDEAEELISM-IDRPDVVTLNTMLAA 689



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 210/468 (44%), Gaps = 13/468 (2%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +   LQ C    +   GR++H  + RS    S  +   ++ MY K   +  A   F+ +A
Sbjct: 17  YARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLADAKAAFDEIA 76

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           DK+   WN +  G++ +    +   LFHK  +    PN   F+  L  C  L DL+ G +
Sbjct: 77  DKNDFVWNLMISGYARSGKNREALELFHKMDIP---PNGFIFASALAACAGLGDLEQGRE 133

Query: 369 LQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           +    L    +  + V  +SL+ M+ RCG+V     +FD +  KN+ +WN ++S   F  
Sbjct: 134 IHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWNAMISA--FVQ 191

Query: 428 CD--ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           CD     L+ +  +    +E NG  F  ++  C    N ++   IH  I   G      +
Sbjct: 192 CDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSLGLQRDIVM 251

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++LI  Y   G +D + E  +G    D+ +W +M++     G   EA   +  +     
Sbjct: 252 ENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFYDGMRRDCV 311

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            P       +L++C+ +   ++ K +H  V   GF +   V +A++  Y++CG ++ A  
Sbjct: 312 SPTSATFVALLSACSTL---EQGKHLHEEVKAFGFESITVVETALMFMYSRCGSLEDAEF 368

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F +     D + ++ ++ ++A  G   +A+ +F +M L  +Q S  TF S + ACS K 
Sbjct: 369 LFAK-MQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILEGMQLSLPTFCSALQACSLK- 426

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              +     + +    G+         LV   S+ G +E+A+ + + M
Sbjct: 427 RDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEARKIFDRM 474


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 312/634 (49%), Gaps = 31/634 (4%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           +EF +   +K C   G  + G  IH F +      +  V  S++N Y K G +  A  VF
Sbjct: 74  DEFTLVLALKACC--GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVF 131

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            ++   D+  WN ++ G+        AL+    M   G+  D  T+  AL  C    +F 
Sbjct: 132 QNLHDPDIVSWNTILSGFEKSE---NALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFL 188

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G Q+H L ++   +  + + NAL+ MY +   +  A KVF+ M  +D +SW+ +  G++
Sbjct: 189 FGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYA 248

Query: 324 ENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           +  + G  A L F + +  G + ++V  +  L  CG   +L+LG Q+ CLA+  G     
Sbjct: 249 QEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHT 308

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           +V + LI  + +C  +E A +VF+ ++ +N+ +W  ++S Y     +   +  F  +   
Sbjct: 309 SVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY-----EEGAVSLFNKMRLD 363

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           GV  N  TF  ++         +    +HG  IK  F S   + +SLI  Y  F      
Sbjct: 364 GVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKF------ 417

Query: 503 FEFSNGAERL-------DMASWGAMMSALVHQGHNHEAVTIF-HSLVEAGEKPDEYILGT 554
            EF   A R+       ++ SW A++S         EA+  F ++++E   KP+EY  G+
Sbjct: 418 -EFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAIMEY--KPNEYTFGS 474

Query: 555 ILNSCAAIG--AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
           +LN+ +A    + +  +  H  +IK+G N +  ++ A++D YAK G I+ ++  F+++ +
Sbjct: 475 VLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNET-S 533

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
                 +  LI  YA HG     +++F++M+   ++P    F+SV++ACS   +VD G  
Sbjct: 534 KQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQ 593

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
            F  M   + ++P  + Y C+VDML R G LE+A+ ++  +P  P  +  +SLL  CR H
Sbjct: 594 FFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTH 653

Query: 733 GNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQR 766
           GN E+ E  +  L+   P     +VL+S    Q+
Sbjct: 654 GNVEMAERIANDLMKKEPLESGPYVLMSNLYAQK 687



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 177/631 (28%), Positives = 285/631 (45%), Gaps = 22/631 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HG ++  GF + I + N+L+ MY K G       VF  + + ++VSW  I+S   
Sbjct: 91  LGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFE 150

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++   +  L   + M  NG   +     + +  C+      FG+ +H  ALK   + + F
Sbjct: 151 KS---ENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVF 207

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFE 240
           VG +++  Y++   +  A +VF  + S D   W+AMI GYA  G  G +A+ V   M+ E
Sbjct: 208 VGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVRE 267

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D      AL  C    + ++G+QIH L +++  E   S+ N LI  Y K   ++ A
Sbjct: 268 GVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDA 327

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VFE + D++VISW T+   + E        SLF+K  L G  PN VTF  LL      
Sbjct: 328 KAVFELINDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITIR 382

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++ GL +  L +   F+ E  V +SLI M+ +   ++ A  VF  + Y+ I +WN L+
Sbjct: 383 NMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALI 442

Query: 421 SGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVETCCRSENQQMV-GQ-IHGAIIKT 477
           SGY  N    + L+ F   I E   + N  TF  V+      E+  +  GQ  H  +IK 
Sbjct: 443 SGYAQNALCQEALEAFLYAIME--YKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKV 500

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G +    I  +L+  Y   G +  S    N   +    +W A++S     G     + +F
Sbjct: 501 GLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLF 560

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDAY 594
             + +   KPD  I  ++L +C+        +     +IK   +    E Y  S ++D  
Sbjct: 561 EEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHY--SCMVDML 618

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF-DKMKLANLQPSQAT 653
            + G ++ A     +      V    +L+ A   HG V  A  I  D MK   L+     
Sbjct: 619 GRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYV 678

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            +S + A   KG  +K   + K M  +  M+
Sbjct: 679 LMSNLYA--QKGDWEKVAKVRKEMRERGVMK 707



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 211/439 (48%), Gaps = 13/439 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +    +LS   + +  + G Q+H   +K GF  D+F+ N L+ MYS+  +     +VF
Sbjct: 170 DSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVF 229

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLK---MYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           DEM  R+ VSW+ +++   Q G  D GL+   ++V M   G   +   +   + VC    
Sbjct: 230 DEMPSRDRVSWSAMITGYAQEG--DNGLQAILVFVQMVREGVKFDNVPITGALSVCGHER 287

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  IHC A+K   E +  VG  +++ Y+K   +  A+ VF  I+  +V  W  MI 
Sbjct: 288 NLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMIS 347

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            Y        A+++ + M  +G+  +  TFI  L   ++    + G  +HGL I+++   
Sbjct: 348 LYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVS 402

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +++ N+LI MY K   M  A +VF  +  +++ISWN L  G+++N    +    F   I
Sbjct: 403 ELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLYAI 462

Query: 340 LSGSRPNHVTFSILLR--QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +   +PN  TF  +L     G+ + L  G +     +  G   +  ++ +L+ M+ + G+
Sbjct: 463 ME-YKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGS 521

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ +  VF+  S ++   W  L+SGY  +     V+K F  + +  ++ +   F  V+  
Sbjct: 522 IQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTA 581

Query: 458 CCRSENQQMVGQIHGAIIK 476
           C R+    M  Q    +IK
Sbjct: 582 CSRNRMVDMGRQFFNMMIK 600


>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
 gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
 gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
 gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 686

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 169/648 (26%), Positives = 314/648 (48%), Gaps = 37/648 (5%)

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           + + ++ C  + A + G SI    +K  I +N F+  +V++ Y     ++ A +VF  +S
Sbjct: 8   IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGR 266
             ++  W  M+ GY   G   +A+ +   ML  E    +++ +   L+ C LV D  +G 
Sbjct: 68  ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            ++  I +  +   + ++N+++DMY+K+  +  A   F+ +      SWNTL  G+ +  
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187

Query: 327 NPGQTASLFHK---------------FILSGSRPNHVTFSILLRQCGKLLD--------- 362
              +  +LFH+               F+  GS P  + F + +++ G +LD         
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLK 246

Query: 363 -------LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY---KN 412
                  L +G QL C  +  G        S+LI M+  CG++  A  VF         +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +  WN +LSG+  N  +   L     I++S +  +  T    ++ C    N ++  Q+H 
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            ++ +G+     + S L+  + N G + ++ +  +     D+ ++  ++   V  G N  
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A  +F  L++ G   D++I+  IL  C+++ +    K IH   IK G+ +E   A+A++D
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KCG+I    + FD      DV+ +  +I+ +  +G V EA   F KM    ++P++ 
Sbjct: 487 MYVKCGEIDNGVVLFDGMLE-RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKV 545

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+ ++SAC H GL+++     ++M S+YG++P  + Y C+VD+L + G  ++A  +I  
Sbjct: 546 TFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINK 605

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MP +P  T++ SLL+ C  H N  L    +EKLL   P + + +  LS
Sbjct: 606 MPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 168/684 (24%), Positives = 294/684 (42%), Gaps = 72/684 (10%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +  H++K G + ++F+ NN+I+MY          +VFDEM+ERN+V+WT +VS    
Sbjct: 24  GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G+ +  +++Y  M  +     NEF   +V+K C  +G  + G  ++    K  +  +  
Sbjct: 84  DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL---------N 232
           +  SV++ Y K G +  A   F  I       WN +I GY   G   EA+         N
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203

Query: 233 VVS---------------------SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
           VVS                      M  EG+ +D +     L+ CS      +G+Q+H  
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVF--ERMA-DKDVISWNTLFGGFSENKNP 328
           +++S +E S   ++ALIDMY     + YA  VF  E++A +  V  WN++  GF  N+  
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                L  +   S    +  T S  L+ C   ++L LGLQ+  L +  G+  +  V S L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + +    G ++ AH +F  +  K+I  ++ L+ G   +  ++     F  + + G++ + 
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
                +++ C    +     QIHG  IK G+ S     ++L+  YV  G++DN     +G
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG 503

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D+ SW  ++      G   EA   FH ++  G +P++     +L++C   G  +  
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           +S     +K  +  E Y+                                Y  ++     
Sbjct: 564 RSTLE-TMKSEYGLEPYLEH------------------------------YYCVVDLLGQ 592

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSP 687
            GL  EA E+ +KM    L+P +  + S+++AC +HK   + G +   +     G    P
Sbjct: 593 AGLFQEANELINKMP---LEPDKTIWTSLLTACGTHK---NAGLVTVIAEKLLKGFPDDP 646

Query: 688 DCYGCLVDMLSRNGYLEDAKHVIE 711
             Y  L +  +  G  +    V E
Sbjct: 647 SVYTSLSNAYATLGMWDQLSKVRE 670



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 204/458 (44%), Gaps = 45/458 (9%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVS-WTLIVS 118
           +G Q+H  +VK G  +  F  + LI MYS CG   +   VF  +++A  + V+ W  ++S
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             + N E +  L + + +  +    + + +   +K+C++      G  +H   +    E 
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  VG  +++ +A +G++  A ++F+ + + D+  ++ +I G    G+   A  +   ++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+  D++   N L+ CS +A    G+QIHGL I+   E       AL+DMY+K   +D
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
               +F+ M ++DV+SW  +  GF +N    +    FHK I  G  PN VTF  LL  C 
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC- 554

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNI-T 414
                           H G L+E    S+L  M    G    +E  + V D +    +  
Sbjct: 555 ---------------RHSGLLEEAR--STLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
             NEL+     N    +  KT   IW S           ++  C   +N  +V  I   +
Sbjct: 598 EANELI-----NKMPLEPDKT---IWTS-----------LLTACGTHKNAGLVTVIAEKL 638

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           +K GF     + +SL  +Y   G  D   +    A++L
Sbjct: 639 LK-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKL 675



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 210/499 (42%), Gaps = 36/499 (7%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + MD       L+ C  V  F  G  I   +I+  +  ++ I N +I MY+    +  A 
Sbjct: 1   MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKL 360
           KVF+ M+++++++W T+  G++ +  P +   L+ + + S     N   +S +L+ CG +
Sbjct: 61  KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            D+ LG+ +           +  + +S++ M+ + G +  A+S F  +   + T+WN L+
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180

Query: 421 SGYC----------------------FNCC--------DADVLKTFCNIWESGVEVNGCT 450
           SGYC                      +NC             L+    +   G+ ++G  
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DNSFEFSN 507
               ++ C       M  Q+H  ++K+G  S  +  S+LI  Y N G L    + F    
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
            A    +A W +M+S  +    N  A+ +   + ++    D Y L   L  C      + 
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              +H  V+  G+  +  V S ++D +A  G+I+ A   F +  N  D+I ++ LI    
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCV 419

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
             G  S A  +F ++    L   Q    +++  CS    +  G  +   +  + G +  P
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI-HGLCIKKGYESEP 478

Query: 688 DCYGCLVDMLSRNGYLEDA 706
                LVDM  + G +++ 
Sbjct: 479 VTATALVDMYVKCGEIDNG 497



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 135/300 (45%), Gaps = 4/300 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+ +L +  N  +  LG QVH  +V  G+  D  + + L+ +++  G      ++F
Sbjct: 341 DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLF 400

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             +  +++++++ ++   +++G   +   ++ ++   G   ++F V +++KVC S+ +  
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           +G  IH   +K   E  P    ++++ Y K G++     +F  +   DV  W  +I G+ 
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG 520

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECS 280
             G   EA      M+  GI  +K TF+  L  C      +  R      ++SE  +E  
Sbjct: 521 QNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPY 579

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           +     ++D+  ++     A ++  +M  + D   W +L      +KN G    +  K +
Sbjct: 580 LEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 93/182 (51%), Gaps = 4/182 (2%)

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D  ++   L  C  + A++R +SI   VIK G +  V++A+ VI  Y     +  A   F
Sbjct: 4   DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSVMSACSHKGL 666
           D+  +  +++ + T++  Y   G  ++A+E++ +M  +  + + +  + +V+ AC   G 
Sbjct: 64  DE-MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           +  G L+++ +  +  ++        +VDM  +NG L +A    + +  +PS T + +L+
Sbjct: 123 IQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLI 180

Query: 727 SG 728
           SG
Sbjct: 181 SG 182


>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
          Length = 591

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/526 (30%), Positives = 266/526 (50%), Gaps = 19/526 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVE---CS--------ISIVNALIDMYIKSSGM 297
           F   L  C    D  +G  +H  ++++      C+        +   NAL+ MY +    
Sbjct: 14  FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRR 73

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQ 356
           + A +VF+ M  +D +SWN+L      ++  G   +LF + + S +R  +  TF+ +L +
Sbjct: 74  EDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFTTVLSE 130

Query: 357 CGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           C +     L     +  L + CGF  E  V ++L+  +  CG+   A  VF  ++ KN+ 
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TW  ++SG        +    F  +  + V+ N  T+   +  C RS   +   Q+HG +
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCTLLACARSLAAREGQQVHGLV 249

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K GF +  ++ S L+  Y   G ++++          D      ++      G   +A 
Sbjct: 250 VKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAF 309

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  +V AG + DE  + T+L +  A   +   K IH  VIK  F    YV + +++ Y
Sbjct: 310 ELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMY 369

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +KCG+++ +   FD+   S + + +N++I A+A HG  SE  ++F+ MK    +P+  TF
Sbjct: 370 SKCGELRESVQVFDE-MPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTF 428

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +S++ ACSH G   KG  +  SM SQYG+ P  + Y C+VDML R G L+DAK  IE  P
Sbjct: 429 LSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGP 488

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F  S  ++++L+  C  HGN E+G+ A+EKLLLL P   AA+VLLS
Sbjct: 489 FTDSALLWQALMGACSFHGNSEVGKHAAEKLLLLDPSCTAAYVLLS 534



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 181/379 (47%), Gaps = 7/379 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGF 141
           N L++MY++CG      RVFDEM  R+ VSW  +++A+   G+    L ++  M +++  
Sbjct: 61  NALVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDAR 117

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
             +     +V+  C   GA+       +H   +    E    VG +++  Y + G  A+A
Sbjct: 118 ACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASA 177

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ERVF+ ++  +V  W AMI G A      E+ ++   M+   +  +  T+   L  C+  
Sbjct: 178 ERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMI-RTVDANNATYSCTLLACARS 236

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
                G+Q+HGL++++  E  + + + L+D+Y K   M+ A  VF    + D +    + 
Sbjct: 237 LAAREGQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVIL 296

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF++N    +   LF + + +G+  +  T S +L   G      LG Q+  L +   F 
Sbjct: 297 VGFAQNGLEEKAFELFAEMVGAGNEIDENTVSTVLGAFGASAPFALGKQIHALVIKRCFG 356

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               V + L+ M+ +CG +  +  VFD +  KN  +WN +++ +  +   ++V + F ++
Sbjct: 357 VNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESM 416

Query: 440 WESGVEVNGCTFFYVVETC 458
              G +    TF  ++  C
Sbjct: 417 KADGAKPTDVTFLSLLHAC 435



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 162/360 (45%), Gaps = 2/360 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG +V  GF  ++ + N L+  Y +CG      RVF  MAE+N+++WT ++S   +   
Sbjct: 145 VHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAEL 204

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           +     ++  M       N       +  C    A+  G  +H   +K   E +  V   
Sbjct: 205 YKESFSLFGQM-IRTVDANNATYSCTLLACARSLAAREGQQVHGLVVKAGFEADLHVESG 263

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K G +  A  VF S    D      ++ G+A  G   +A  + + M+  G  +D
Sbjct: 264 LMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEID 323

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T    L      A F +G+QIH L+I+     +  + N L++MY K   +  + +VF+
Sbjct: 324 ENTVSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFD 383

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  K+ +SWN++   F+ + +  +   LF      G++P  VTF  LL  C  +     
Sbjct: 384 EMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKK 443

Query: 366 GLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           GL+ L  ++   G L      + ++ M  R G ++ A S  ++  + +     + L G C
Sbjct: 444 GLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGAC 503



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 137/296 (46%), Gaps = 23/296 (7%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+ + +L +R  G QVHG +VK GF  D+ +++ L+ +YSKCG     L VF    E + 
Sbjct: 231 LACARSLAARE-GQQVHGLVVKAGFEADLHVESGLMDVYSKCGLMEDALTVFRSCREPDE 289

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS---EFGYSI 167
           V  T+I+    QNG  +   +++ +M   G   NE    +V  V  + GAS     G  I
Sbjct: 290 VFLTVILVGFAQNGLEEKAFELFAEMVGAG---NEIDENTVSTVLGAFGASAPFALGKQI 346

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   +K     N +V   ++N Y+K G++  + +VF  + S +   WN++I  +A  G+G
Sbjct: 347 HALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMPSKNSVSWNSIIAAFARHGHG 406

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HGLIIRSEVECS 280
            E   +  SM  +G      TF++ L  CS V     G +I       +G++ R E    
Sbjct: 407 SEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYAC 466

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKD-VISWNTLFGG--FSENKNPGQTAS 333
           +      +DM  ++  +D A    E     D  + W  L G   F  N   G+ A+
Sbjct: 467 V------VDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFHGNSEVGKHAA 516


>gi|302761576|ref|XP_002964210.1| hypothetical protein SELMODRAFT_411 [Selaginella moellendorffii]
 gi|300167939|gb|EFJ34543.1| hypothetical protein SELMODRAFT_411 [Selaginella moellendorffii]
          Length = 727

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 184/726 (25%), Positives = 342/726 (47%), Gaps = 34/726 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH H  +LG      L N ++ MY++CG     ++VF E+  ++L+SW  I+ A + 
Sbjct: 1   GRMVHSHARELGLGGLASLMNAVMNMYARCGSLEEAVQVFAEI-RKDLISWNTIIGAYVH 59

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +  ++  + ++  M+  GF P++  + +++KVC +  +  F  S    A  + +     +
Sbjct: 60  HAHYEEAINLFQQMQLQGFPPDKITLLAMLKVCSN--SKFFLKSKLIHACVVELGDEVEL 117

Query: 183 GCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             +++  Y K G++ A+  VF S +       WN+ +   +  G   EAL + S ML +G
Sbjct: 118 AAAIMGMYGKCGNLEASATVFSSSAFQQSPATWNSRLAALSQEGQSTEALVLYSCMLLQG 177

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ TF+  L   + +    +   +HG II+        +  AL+D Y K   ++ A 
Sbjct: 178 VMPDRVTFLALLDVAATLEARPVVEGLHGHIIQRGYARDTFVATALLDTYSKCGRLEEAR 237

Query: 302 KVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
            VFE ++  D++V+ W  +   + ++   G+    F    L G  PN VT + +L  C K
Sbjct: 238 CVFETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACSK 297

Query: 360 LL----DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           +     +L   +++    +  G   E  V ++ + +  + G +  A  +F  +  +N+ +
Sbjct: 298 VELEADELKSVMRVYRCCVELGHDRELVVGNAALSVHAKLGNLREAREIFSRMWTRNVVS 357

Query: 416 WNELLSGYCFNCCDADVLKTFCN--IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
           WN +LS  C    ++   +      + ES    +  TF  ++  C +S      G++   
Sbjct: 358 WNSILSA-CAQVGESRECRCLFRHMLLESDSRPDNYTFITILGVCKQSREDLTHGRLLHQ 416

Query: 474 IIKTGFSSCGYI-CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           + +    S   I  ++L+  Y   G L+++       ++ D+ SW AM+SAL H G    
Sbjct: 417 LARESSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEFQR 476

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
              +F  + ++   PD      +LN+C A    +  + +    ++ GF  EV  A+A I+
Sbjct: 477 VFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFSEAVRAGFGAEV--AAAGIN 534

Query: 593 AYAKCGDIKGARMAFDQSF-NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
            + KCG ++ A   F     +   ++ +N L  A AH    SE + + + M+L+ + P  
Sbjct: 535 LFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSGIDPDL 594

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TFVSV+S  SH G V+  C    SM + +G+ PS   Y C++D+L R G L++A+ ++ 
Sbjct: 595 VTFVSVLSTLSHAGFVEACCYQLSSMSTDHGLTPSATHYCCVIDVLGRAGLLDEAEEMVA 654

Query: 712 I-----------------MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           +                     P   ++ S L+ C IHG+ E G+ A E++L   P++ A
Sbjct: 655 VKLRNRRQELSSSRSSGGSGDDPLVVLWTSFLAACGIHGDSERGKRAVERILARQPEDAA 714

Query: 755 AHVLLS 760
            +V+LS
Sbjct: 715 TYVVLS 720



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 21/436 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +     L ++  L++R +   +HGHI++ G+  D F+   L+  YSKCG       VF
Sbjct: 181 DRVTFLALLDVAATLEARPVVEGLHGHIIQRGYARDTFVATALLDTYSKCGRLEEARCVF 240

Query: 103 DEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC--VSM 158
           + ++  +RN+V WT +VSA  Q+G F   L  +  M+  G  PN+  + +V+  C  V +
Sbjct: 241 ETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACSKVEL 300

Query: 159 GASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            A E    +  +   + +  ++   VG + L+ +AKLG++  A  +F  + + +V  WN+
Sbjct: 301 EADELKSVMRVYRCCVELGHDRELVVGNAALSVHAKLGNLREAREIFSRMWTRNVVSWNS 360

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLV-ADFDIGRQIHGLIIR 274
           ++   A  G   E   +   ML E  +  D YTFI  L  C     D   GR +H L   
Sbjct: 361 ILSACAQVGESRECRCLFRHMLLESDSRPDNYTFITILGVCKQSREDLTHGRLLHQLARE 420

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S     + +  AL+ MY +   ++ A   F  +   DV+SWN +    S      +   L
Sbjct: 421 SSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPDVVSWNAMISALSHYGEFQRVFDL 480

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +   S   P+ +TF  +L  C    +L+LG ++   A+  GF  E  V ++ I +F +
Sbjct: 481 FQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFSEAVRAGFGAE--VAAAGINLFGK 538

Query: 395 CGAVEMAHSVFDNV--SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
           CG +E A   F  +    K++  WN L +        ++V++    +  SG++ +  TF 
Sbjct: 539 CGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARPSEVIRVLECMRLSGIDPDLVTFV 598

Query: 453 YV---------VETCC 459
            V         VE CC
Sbjct: 599 SVLSTLSHAGFVEACC 614


>gi|255544628|ref|XP_002513375.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547283|gb|EEF48778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 922

 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 195/691 (28%), Positives = 330/691 (47%), Gaps = 16/691 (2%)

Query: 63  GTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  +H   +K G  N  +F  N LI MYSK GY      VFDEM+E+N  SW  I+SA +
Sbjct: 232 GKALHALCIK-GLANLGVFYNNTLINMYSKFGYICLARYVFDEMSEKNEASWNHIISAYL 290

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA--SEFGYSIHCFALKIRIEKN 179
             G +   + ++ DM+  G  P  FA  S++  C   G   SE G  +H   +K  +  +
Sbjct: 291 HAGLYRESIGLFNDMRDLGIKPTGFAFASLVTACDRSGCMLSE-GIQVHDLIVKFGMLCD 349

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FVG S+L+FY   G    A RVF  +   +V  W A++  Y+  G   E +N+   M  
Sbjct: 350 VFVGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSDFGDPMEVMNIYCEMRC 409

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG++ +  T    +  C+ + D  +G QI G +I+S +  ++S+ N+LI M+        
Sbjct: 410 EGLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQE 469

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F  M + D+ISWN++   + +N    ++   F+      +  N  T S LL +CG 
Sbjct: 470 ACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGS 529

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           + +L  G  +  L +  G      + ++LI M+   G  E A  VF  ++ +++ +WN +
Sbjct: 530 VDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSM 589

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L+ Y  +    D LK F  I+      N  TF   +  C   +       +H  +I TG 
Sbjct: 590 LACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIAEGRILHALVILTGL 649

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + ++L+  Y   G    + +      R D  +W A++    +   + EAV  F  
Sbjct: 650 HESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAFKL 709

Query: 540 LVEAGEKPDEYILGTILNSCAAIGA----YQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           + E  + P  YI  TI N   A+ A     +    IH + + +G  ++ YV +++I  YA
Sbjct: 710 MRE--DIPASYI--TIANVLGALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYA 765

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCGD+  +   FD   N N  + +NT++ A A+HG + E++++  KM+ A +   Q +F 
Sbjct: 766 KCGDLNSSNCIFDGLINKN-AVAWNTVMAANAYHGQMEESLKLLVKMRHAGVDLDQFSFS 824

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
             +SA +   ++++G  L +S+  + G    P     L+DM ++ G L+D   +I   P 
Sbjct: 825 GCLSATATLAMLEEGQQL-QSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIP-QPL 882

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           + S   + +L+S    HGN E  +    ++L
Sbjct: 883 ERSRLSWNTLISSFARHGNFERAKETFHEML 913



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 155/591 (26%), Positives = 274/591 (46%), Gaps = 3/591 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH  IVK G   D+F+  +L+  Y   G      RVF+EM ++N+VSWT ++ A   
Sbjct: 334 GIQVHDLIVKFGMLCDVFVGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSD 393

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+    + +Y +M+  G   N   + +V+  C S+     G+ I    +K  +  N  V
Sbjct: 394 FGDPMEVMNIYCEMRCEGLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSV 453

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ +   G    A  +F  ++  D+  WN+MI  Y   G   E+L     M     
Sbjct: 454 ENSLISMFGSFGRAQEACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHN 513

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            ++  T    L  C  V +   GR IH L+I+  ++ +I I N LI MY  +   ++A  
Sbjct: 514 HINSTTLSTLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADL 573

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF++MA++D+ISWN++   ++++        +F +        N VTF+  L  C     
Sbjct: 574 VFQKMAERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDF 633

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           +  G  L  L +  G  +   V+++L+ ++ + G    A  VF  +S ++  TWN L+ G
Sbjct: 634 IAEGRILHALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGG 693

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSS 481
           +  N    + +K F  +    +  +  T   V+       +    G  IH   +  G  S
Sbjct: 694 HANNRESDEAVKAF-KLMREDIPASYITIANVLGALLAPTDLLKHGMPIHAYTVMIGLES 752

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+ +SLI  Y   G L++S    +G    +  +W  +M+A  + G   E++ +   + 
Sbjct: 753 DQYVQNSLITMYAKCGDLNSSNCIFDGLINKNAVAWNTVMAANAYHGQMEESLKLLVKMR 812

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            AG   D++     L++ A +   +  + +    +KLGF+++ +V +A++D YAKCG++ 
Sbjct: 813 HAGVDLDQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELD 872

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
                  Q    +  + +NTLI ++A HG    A E F +M    + P   
Sbjct: 873 DVLRIIPQPLERSR-LSWNTLISSFARHGNFERAKETFHEMLKCGVTPDHT 922



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/506 (25%), Positives = 244/506 (48%), Gaps = 8/506 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA  +S   +L+   LG Q+ GH++K G   ++ ++N+LI+M+   G       +F  M 
Sbjct: 419 LATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISMFGSFGRAQEACYIFGGMN 478

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E +++SW  ++S  +QNG F+  L+ +  M+      N   + +++  C S+   ++G  
Sbjct: 479 EHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTLSTLLSECGSVDNLKWGRG 538

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH   +K  ++ N  +  +++  Y+  G    A+ VF  ++  D+  WN+M+  YA  G 
Sbjct: 539 IHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVFQKMAERDLISWNSMLACYAQDGK 598

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +AL + + +       +  TF +AL  CS       GR +H L+I + +  S+ + NA
Sbjct: 599 SLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIAEGRILHALVILTGLHESLIVSNA 658

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+ +Y KS     A KVF+ M+ +D ++WN L GG + N+   +    F K +      +
Sbjct: 659 LVTLYAKSGTTIEAKKVFQMMSRRDEVTWNALIGGHANNRESDEAVKAF-KLMREDIPAS 717

Query: 347 HVTFSILLRQCGKLLD----LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           ++T + +L   G LL     L  G+ +    +  G   ++ V +SLI M+ +CG +  ++
Sbjct: 718 YITIANVL---GALLAPTDLLKHGMPIHAYTVMIGLESDQYVQNSLITMYAKCGDLNSSN 774

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +FD +  KN   WN +++   ++    + LK    +  +GV+++  +F   +       
Sbjct: 775 CIFDGLINKNAVAWNTVMAANAYHGQMEESLKLLVKMRHAGVDLDQFSFSGCLSATATLA 834

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
             +   Q+    +K GF S  ++ ++L+  Y   G+LD+              SW  ++S
Sbjct: 835 MLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRIIPQPLERSRLSWNTLIS 894

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPD 548
           +    G+   A   FH +++ G  PD
Sbjct: 895 SFARHGNFERAKETFHEMLKCGVTPD 920



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/508 (24%), Positives = 238/508 (46%), Gaps = 7/508 (1%)

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           +G S +     G+ +H L I+      +   N LI+MY K   +  A  VF+ M++K+  
Sbjct: 221 KGFSQITKEAPGKALHALCIKGLANLGVFYNNTLINMYSKFGYICLARYVFDEMSEKNEA 280

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL-LDLDLGLQLQCL 372
           SWN +   +       ++  LF+     G +P    F+ L+  C +    L  G+Q+  L
Sbjct: 281 SWNHIISAYLHAGLYRESIGLFNDMRDLGIKPTGFAFASLVTACDRSGCMLSEGIQVHDL 340

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  G L +  V +SL++ +   G    A  VF+ +  KN+ +W  L+  Y       +V
Sbjct: 341 IVKFGMLCDVFVGTSLLHFYGTYGLAFNARRVFNEMLDKNVVSWTALMVAYSDFGDPMEV 400

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           +  +C +   G+  N  T   V+ +C   E++ +  QI G +IK+G  +   + +SLI  
Sbjct: 401 MNIYCEMRCEGLSGNANTLATVISSCASLEDEFLGHQILGHVIKSGLGTNVSVENSLISM 460

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           + +FG+   +     G    D+ SW +M+S  V  G   E++  F+ +       +   L
Sbjct: 461 FGSFGRAQEACYIFGGMNEHDIISWNSMISVYVQNGLFEESLRCFYWMQHVHNHINSTTL 520

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            T+L+ C ++   +  + IH  VIK G ++ + + + +I  Y+  G  + A + F Q   
Sbjct: 521 STLLSECGSVDNLKWGRGIHSLVIKFGMDSNICICNTLIAMYSGAGKSEHADLVF-QKMA 579

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             D+I +N+++  YA  G   +A++IF ++       +  TF S ++ACS    + +G +
Sbjct: 580 ERDLISWNSMLACYAQDGKSLDALKIFTRIFHMKKGANFVTFTSALAACSDPDFIAEGRI 639

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
           L  ++    G+  S      LV + +++G   +AK V ++M  +   T + +L+ G   H
Sbjct: 640 L-HALVILTGLHESLIVSNALVTLYAKSGTTIEAKKVFQMMSRRDEVT-WNALIGG---H 694

Query: 733 GNKELGEWASEKLLLLLPKNDAAHVLLS 760
            N    + A +   L+     A+++ ++
Sbjct: 695 ANNRESDEAVKAFKLMREDIPASYITIA 722



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    +  LS +  L     G Q+    VKLGF +D F+ N L+ MY+KCG     LR+ 
Sbjct: 819 DQFSFSGCLSATATLAMLEEGQQLQSLAVKLGFDSDPFVTNALMDMYAKCGELDDVLRII 878

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
            +  ER+ +SW  ++S+  ++G F+   + + +M   G  P+
Sbjct: 879 PQPLERSRLSWNTLISSFARHGNFERAKETFHEMLKCGVTPD 920


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 274/531 (51%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ LI+  + S    G+ YA  VFE + + +++ WNT+F G 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C K      G Q+    L  G+  + 
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSY-------------------------------K 411
            V +SLI M+ + G +E A  VFD  S+                               K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN ++SGY     + + L+ F  + ++ V  +  T   VV  C +S + ++  Q+H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF S   I ++LI  Y+  G+++ +     G    D+ SW  ++    H     
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P++  + +IL +CA +GA +  + IH ++ K   G        ++
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A+  FD   N + +  +N +I  +A HG  + A +IF +M+   ++P
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRS-LSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 422

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L  +G  ++A+ +
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 482

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M  +P   ++ SLL  C++HGN ELGE  ++ L+ + PKN  ++VLLS
Sbjct: 483 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLS 533



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 246/549 (44%), Gaps = 69/549 (12%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +H  ++K G  N  +  + LI       +F    + + VF+ + E NL+ W  +      
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +    L +YV M + G +PN +    ++K C    A   G  IH   LK+  + + +V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 183 GCSVLNFY-------------------------------AKLGDVAAAERVFYSISSDDV 211
             S+++ Y                               A  G +A+A+++F  I   DV
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI GYA  G   EAL +   M+   +  D+ T ++ +  C+  A  ++GRQ+H  
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I       ++ IVNALID+YIK   ++ A  +FE ++ KDVISWNTL GG++      + 
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--ALHCGFLDEENVTSSLI 389
             LF + + SG  PN VT   +L  C  L  +++G  +         G  +  +  +SLI
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +E A  VFD++  +++++WN ++ G+  +         F  + ++ +E +  
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++  C            H  ++  G     +I  S+ + Y    +L++        
Sbjct: 426 TFVGLLSACS-----------HSGMLDLG----RHIFRSMKEDYKITPKLEH-------- 462

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
                  +G M+  L H G   EA  + +++     +PD  I  ++L +C   G  +  +
Sbjct: 463 -------YGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGE 512

Query: 570 SIHPFVIKL 578
           S    +IK+
Sbjct: 513 SYAQNLIKI 521



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAM----------------- 88
           FL KS + S+  +    G Q+HGH++KLG+  D+++  +LI+M                 
Sbjct: 93  FLLKSCAKSKAFRE---GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149

Query: 89  --------------YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                         Y+  GY     ++FDE+  +++VSW  ++S   + G     L+++ 
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + SV+  C    + E G  +H +        N  +  ++++ Y K G
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G + +  T ++ L 
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   +IGR IH  I +    V  + S   +LIDMY K   ++ A +VF+ + ++ +
Sbjct: 330 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +        +F +   +   P+ +TF  LL  C     LDLG  +
Sbjct: 390 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 11/249 (4%)

Query: 30  GNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           GNN+   + F       +R D   +   +S      S  LG QVH  I   GF +++ + 
Sbjct: 199 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 258

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI +Y KCG       +F+ ++ ++++SW  ++        +   L ++ +M  +G  
Sbjct: 259 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG---CSVLNFYAKLGDVAAA 199
           PN+  + S++  C  +GA E G  IH +  K R++          S+++ YAK GD+ AA
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINK-RLKGVANASSHRTSLIDMYAKCGDIEAA 377

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ++VF SI +  +  WNAMI G+A  G    A ++ S M    I  D  TF+  L  CS  
Sbjct: 378 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 437

Query: 260 ADFDIGRQI 268
              D+GR I
Sbjct: 438 GMLDLGRHI 446


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 258/498 (51%), Gaps = 34/498 (6%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+ YA  VF+ + + + +SWNT+  G + + +P    +L+   I  G  PN  TF  L +
Sbjct: 27  GLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK 86

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN------VS 409
            C K      G Q+    L  G   + +V +SLI M+ + G VE AH VFD       VS
Sbjct: 87  SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146

Query: 410 Y-------------------------KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           Y                         K++ +WN ++SGY       + L+ F  + +  V
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + +  T   V+ TC  S N ++  QIH  I   GF S   + ++LI  Y   G+++ +  
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G +  D+ SW  ++    +  H+ EA+ +F  +++ GE P++  + +IL +CA +GA
Sbjct: 267 LFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGA 326

Query: 565 YQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
               + IH ++ K   G  T   + +++ID YAKCG+I+ A   FD   N + +   N +
Sbjct: 327 IDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS-LSSCNAM 385

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  +A HG    A ++  +MK   ++P   TFV ++SACSH GL D G  +FKSM   Y 
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           ++P  + YGC++D+L R+G  ++A+ +I  M  +P   ++ SLL  C+IH N ELGE  +
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIA 505

Query: 743 EKLLLLLPKNDAAHVLLS 760
           +KL+ + PKN  ++VLLS
Sbjct: 506 QKLMKIEPKNPGSYVLLS 523



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 135/525 (25%), Positives = 227/525 (43%), Gaps = 69/525 (13%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYF---GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           +K+G  N  +  + L+       YF    + + VF  + E N +SW  ++     + +  
Sbjct: 1   IKIGLHNTNYALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPI 60

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
             L +YV M + G  PN +    + K C    A++ G  IH   LK  +  +  V  S++
Sbjct: 61  SALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120

Query: 188 NFYAK-------------------------------LGDVAAAERVFYSISSDDVGCWNA 216
           + YA+                                G++  A+++F  I   DV  WNA
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GYA  G   EAL + + M+   +  D+ T    L  C+   + ++GRQIH  I    
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
              ++ +VNALID+Y K   M+ A  +FE +  KDVISWNTL GG++   +  +   +F 
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQ 300

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH--CGFLDEENVTSSLIYMFCR 394
           + +  G  PN VT   +L  C  L  +D+G  +         G +   ++ +SLI M+ +
Sbjct: 301 EMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAK 360

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG +E A+ VFD +  K++++ N ++ G+  +            + + G+E +  TF  +
Sbjct: 361 CGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGL 420

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C  +                G S  G     + KS      LD   E         +
Sbjct: 421 LSACSHA----------------GLSDLG---RKIFKSMT----LDYRIEPK-------L 450

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             +G M+  L   G   EA  + +S+     +PD  I G++L +C
Sbjct: 451 EHYGCMIDLLGRSGLFKEAEELINSMT---MEPDGVIWGSLLKAC 492



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 166/357 (46%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-------------- 91
           FL KS + S   K+   G Q+H  I+K G T D+ +  +LI+MY++              
Sbjct: 83  FLFKSCAKS---KAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTS 139

Query: 92  ------------CGYFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                        GY   G      ++FDE+  +++VSW  ++S   + G +   L+++ 
Sbjct: 140 SHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFN 199

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + +V+  C   G  E G  IH +        N  +  ++++ Y+K G
Sbjct: 200 EMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG 259

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           ++  A  +F  +   DV  WN +IGGYA+  +  EAL V   ML  G T +  T ++ L 
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILP 319

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    +  + S+  +LIDMY K   ++ A +VF+ + +K +
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            S N +  GF+ +        L  +    G  P+ +TF  LL  C      DLG ++
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKI 436



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 4/292 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   +A  LS   +  +  LG Q+H  I   GF +++ L N LI +YSKCG      
Sbjct: 206 VKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAH 265

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ +  ++++SW  ++            L ++ +M   G  PN+  + S++  C  +G
Sbjct: 266 GLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLG 325

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    I  N  +  S+++ YAK G++ AA +VF +I +  +   NAM
Sbjct: 326 AIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAM 385

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSE 276
           I G+A  G    A +++S M  +GI  D  TF+  L  CS     D+GR+I   + +   
Sbjct: 386 IFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYR 445

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +E  +     +ID+  +S     A ++   M  + D + W +L      +KN
Sbjct: 446 IEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKN 497


>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  276 bits (706), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/530 (30%), Positives = 280/530 (52%), Gaps = 23/530 (4%)

Query: 249 FINALQG-CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           FIN +   C+  A +D+G Q+H  IIR     ++ I +A++DMY K S +  A +VF  M
Sbjct: 71  FINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEM 130

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            +++ ++WN+L  G+  N  P         F          + S  L  C +L   + G 
Sbjct: 131 PERNDVTWNSLIFGYL-NVMPTCAMRGVTSF----------SVSTCLVVCSQLEVRNFGA 179

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           Q+  L+L  GF +   V ++LI M+ +C  V+ +  VFD +  KN+ TW  +++ Y  N 
Sbjct: 180 QVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNE 239

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              + +     +   G++ N  T+  ++ +    +  Q   Q+H +II+ G     YI +
Sbjct: 240 QPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAA 299

Query: 488 SLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +L+  Y      L++  + S+G +  D  SW A+++   + G   +A+  F  +  A  K
Sbjct: 300 TLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIK 359

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
            D Y   ++L +  A  A +  + +H  ++K G+ + VYV + ++  YA+CG I  ++  
Sbjct: 360 MDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRV 419

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F      +DV+ +N L+   AHHG  +EA+E+F++M+   ++P+  TF++V+SACSH G 
Sbjct: 420 F-WLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGS 478

Query: 667 VDKGCLLFKSMDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           VDKG   F  M S   ++P   + Y  +VD+  R GYL +A+ +I  MP  P P+VY++L
Sbjct: 479 VDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVYKAL 538

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEG 775
           LS C +HGN+E+   ++ KLL L P + A ++LLS        N+L  EG
Sbjct: 539 LSACLVHGNREIAVRSARKLLELWPDDPATYILLS--------NMLATEG 580



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/584 (23%), Positives = 269/584 (46%), Gaps = 49/584 (8%)

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           ++  +  NG   N + +  V+  C    + + G  +H   +++    N  +  +V++ YA
Sbjct: 56  LFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYA 115

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K  ++ +A  VF  +   +   WN++I GY         LNV+ +    G+T   ++   
Sbjct: 116 KCSEIQSAHEVFNEMPERNDVTWNSLIFGY---------LNVMPTCAMRGVT--SFSVST 164

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  CS +   + G Q+HGL ++   + ++ +  ALIDMY K  G+D +++VF+ M DK+
Sbjct: 165 CLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKN 224

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V++W  +   +++N+ P +   L  + +  G + N+VT++ LL        +    Q+ C
Sbjct: 225 VVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHC 284

Query: 372 LALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             + CG      + ++L+ ++ +C   +E  + +   V   +  +WN +++GY       
Sbjct: 285 SIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGE 344

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
           D LK FC +  + ++++  TF  ++         +   ++H  I+KTG++S  Y+ + L+
Sbjct: 345 DALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLV 404

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             Y   G +D+S       E  D+ SW A+++   H G  +EAV +F  + +   KP+  
Sbjct: 405 SMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNST 464

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
               +L++C+ +G+  +      F+      +++ +    ++ YA   DI G        
Sbjct: 465 TFLAVLSACSHVGSVDKGLEYFDFM-----RSDISLEPLRVEHYASVVDIFG-------- 511

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
                              G +SEA  I + M    + P  + + +++SAC   G  +  
Sbjct: 512 -----------------RAGYLSEAEAIINCMP---MDPGPSVYKALLSACLVHGNRE-- 549

Query: 671 CLLFKSMDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            +  +S      + P  P  Y  L +ML+  GY +DA  V ++M
Sbjct: 550 -IAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLM 592



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 1/319 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L +   L+ R  G QVHG  +KLGF N++F+   LI MYSKC       RVFD M ++N+
Sbjct: 166 LVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNV 225

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+WT +V+A  QN + D  + +  +M   G   N     S++         ++   +HC 
Sbjct: 226 VTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCS 285

Query: 171 ALKIRIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
            ++  +E N ++  +++  Y+K   ++    ++   +   D   WNA+I GY++ G G +
Sbjct: 286 IIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGED 345

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL     M    I MD YTF + L         + GR++H LI+++    S+ + N L+ 
Sbjct: 346 ALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVS 405

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY +   +D + +VF  M D DV+SWN L  G + +    +   LF +   +  +PN  T
Sbjct: 406 MYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTT 465

Query: 350 FSILLRQCGKLLDLDLGLQ 368
           F  +L  C  +  +D GL+
Sbjct: 466 FLAVLSACSHVGSVDKGLE 484



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 228/476 (47%), Gaps = 42/476 (8%)

Query: 4   LKRAFLFADKPSCHFHATRKRIHRLCGNNQ----------FCSDSF---LRK----DPIF 46
           L+RAF    KP+ H  +   R + +  N +          F SD F   LR     +P F
Sbjct: 19  LQRAF----KPTNHLLS---RAYHIASNPEQDYLYQYYQTFDSDLFAHLLRNGSFSNPYF 71

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           + K +S      S  LG Q+H  I+++GFT+++ + + ++ MY+KC        VF+EM 
Sbjct: 72  INKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMP 131

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP--NEFAVGSVMKVCVSMGASEFG 164
           ERN V+W  ++               Y+++     M     F+V + + VC  +    FG
Sbjct: 132 ERNDVTWNSLIFG-------------YLNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFG 178

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H  +LK+  + N FVG ++++ Y+K   V  + RVF  +   +V  W AM+  YA  
Sbjct: 179 AQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQN 238

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               EA+ +V  M+  GI  +  T+ + L   S        +Q+H  IIR  +EC++ I 
Sbjct: 239 EQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIA 298

Query: 285 NALIDMYIK-SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSG 342
             L+ +Y K ++ ++   K+   +   D ISWN +  G+S N   G+ A   F +   + 
Sbjct: 299 ATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYS-NLGLGEDALKCFCEMRHAN 357

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            + +  TF+ LL   G  L ++ G ++  L +  G+     V + L+ M+ RCGA++ + 
Sbjct: 358 IKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSK 417

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            VF  +   ++ +WN LL+G   +    + ++ F  + ++ ++ N  TF  V+  C
Sbjct: 418 RVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSAC 473



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 191/402 (47%), Gaps = 13/402 (3%)

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           + LF   + +GS  N    + ++  C K    DLG+QL    +  GF    ++ S+++ M
Sbjct: 54  SDLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDM 113

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +C  ++ AH VF+ +  +N  TWN L+ GY       +V+ T      +   V+ C  
Sbjct: 114 YAKCSEIQSAHEVFNEMPERNDVTWNSLIFGYL------NVMPTCAMRGVTSFSVSTC-- 165

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
              +  C + E +    Q+HG  +K GF +  ++ ++LI  Y     +D+S+   +    
Sbjct: 166 ---LVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVD 222

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            ++ +W AM++A        EA+ +   ++  G K +     ++L+S +     Q  K +
Sbjct: 223 KNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQV 282

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H  +I+ G    +Y+A+ ++  Y+KC +              +D I +N +I  Y++ GL
Sbjct: 283 HCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGL 342

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
             +A++ F +M+ AN++    TF S++ A      +++G  +  ++  + G   S     
Sbjct: 343 GEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREM-HALIVKTGYASSVYVQN 401

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
            LV M +R G ++D+K V  +M        + +LL+GC  HG
Sbjct: 402 GLVSMYARCGAIDDSKRVFWLME-DHDVVSWNALLTGCAHHG 442


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 172/553 (31%), Positives = 290/553 (52%), Gaps = 16/553 (2%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   +++T +  LQ CS + D  +G QIHG +I+S  E ++ +  +LI MY +S   D A
Sbjct: 5   GEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEA 64

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF  +  KD+   N +   + +     +   +F   I  G  PN  TF+ ++  C   
Sbjct: 65  EKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTC--- 121

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +++ G QL  LA+  G L + +V +++I M+ + G VE A  +F  ++ KN+ +W  L+
Sbjct: 122 -NVEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALI 180

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N      +  F  +   GVE +      +++ C   +N  +  QIHG +IK G+ 
Sbjct: 181 SGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYP 240

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               I ++LI  Y       ++    NG      AS+ A++   +    N E   +F S 
Sbjct: 241 CDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQ 300

Query: 541 VE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  AG KPD      +L+  A   +  + + +H + IK GF   + V++A+I  YAKCG 
Sbjct: 301 LRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGI 360

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++ A  AF+ S ++ND I +N +I AY+ HG   +A+ ++ +M+     P + T + ++ 
Sbjct: 361 VEDAYQAFN-SMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQ 419

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC++ GL + G  LF +M+S+YG+QP  + Y C+VD+L R GYL  A  +I   PF  S 
Sbjct: 420 ACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSEST 479

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNV 779
            ++R+L++ C++ G+  LG+ AS+ LL L P    ++VL+S        N+   EG+ + 
Sbjct: 480 LLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVS--------NIYAGEGMIDE 531

Query: 780 NDGIKTV--DLKL 790
              ++T   DLKL
Sbjct: 532 ASKVRTTMKDLKL 544



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 202/402 (50%), Gaps = 5/402 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           VLG Q+HG ++K GF  ++F+  +LI+MYS+ G F    +VF+ +  ++L     ++   
Sbjct: 27  VLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNGVGCKDLRCLNCMILEY 86

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            + G     + +++ + + G  PN++   +++  C      E G  +H  A+K  +    
Sbjct: 87  GKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTC----NVEEGKQLHGLAVKYGVLLQT 142

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG +V+  Y K G V  A R+F  ++  ++  W A+I GY   GYG +A++    +   
Sbjct: 143 SVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGC 202

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D       L GCS   + D+G QIHGL+I+    C I+I  ALID+Y K      A
Sbjct: 203 GVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSA 262

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGK 359
             VF  ++ +   S+N +  GF EN +  +   +F  +  L+G +P+ V+FS LL     
Sbjct: 263 RTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSAN 322

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
              L  G  L   ++  GF    +V+++LI M+ +CG VE A+  F+++S  +  +WN +
Sbjct: 323 RASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAI 382

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +S Y  +      L  +  + E G   +  T   +++ C  S
Sbjct: 383 ISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYS 424



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 261/539 (48%), Gaps = 13/539 (2%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           NE     +++ C  +G    G  IH F +K   E+N FVG S+++ Y++ G+   AE+VF
Sbjct: 9   NEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVF 68

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   D+ C N MI  Y   GY   A+ V   ++  G+  + YTF N +  C++    +
Sbjct: 69  NGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNV----E 124

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G+Q+HGL ++  V    S+ NA+I MY K+  ++ A ++F  M  K++ISW  L  G++
Sbjct: 125 EGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALISGYT 184

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            N    +    F +    G   +    + +L  C +  +LDLG Q+  L +  G+  + N
Sbjct: 185 RNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDIN 244

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN-CCDADVLKTFCNIWES 442
           + ++LI ++ +C   + A +VF+ +S ++  ++N +L G+  N   + D +     +  +
Sbjct: 245 IGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLA 304

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G++ +  +F  ++       +      +H   IKTGF+    + ++LI  Y   G ++++
Sbjct: 305 GIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDA 364

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
           ++  N     D  SW A++SA    G   +A+ ++  + E G  PDE  +  IL +C   
Sbjct: 365 YQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYS 424

Query: 563 GAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           G  +    +H F     K G    +   + ++D   + G +  A    ++S  S   +++
Sbjct: 425 GLSE--DGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSESTLLW 482

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSM 677
            TL+      G ++  +       L +L P +A ++V V +  + +G++D+   +  +M
Sbjct: 483 RTLVNVCKLCGDLN--LGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTTM 539



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 1/216 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   LA  L      K+  LGTQ+HG ++KLG+  DI +   LI +Y+KC  F     VF
Sbjct: 207 DSGLLATILDGCSECKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVF 266

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV-DMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           + ++ R+  S+  I+   I+N   +    +++  ++  G  P+  +   ++ +  +  + 
Sbjct: 267 NGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASL 326

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  +H +++K     +  V  +++  YAK G V  A + F S+S++D   WNA+I  Y
Sbjct: 327 VKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAY 386

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +  G G +AL +   M  +G T D+ T +  LQ C+
Sbjct: 387 SLHGQGEKALLLYQEMEEKGFTPDEITILVILQACT 422



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 40/273 (14%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +  ++ LSLS N  S V G  +H + +K GF   I + N LI MY+KCG      
Sbjct: 306 IKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAY 365

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F+ M+  + +SW  I+SA   +G+ +  L +Y +M+  GF P+E  +  +++ C   G
Sbjct: 366 QAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVILQACTYSG 425

Query: 160 ASEFGYSIHCF-ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            SE G  +H F  ++ +    P     +L  YA                     C   ++
Sbjct: 426 LSEDG--LHLFNTMESKYGIQP-----LLEHYA---------------------CMVDLL 457

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR--QIHGLIIRSE 276
           G     GY  +A+++++   F   T+   T +N    C L  D ++G+    H L +  +
Sbjct: 458 G---RAGYLSQAMDIINRSPFSESTLLWRTLVNV---CKLCGDLNLGKLASKHLLDLSPD 511

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              S  +V+   ++Y     +D A KV   M D
Sbjct: 512 EAGSYVLVS---NIYAGEGMIDEASKVRTTMKD 541



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 104/230 (45%), Gaps = 5/230 (2%)

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           E G + N  T   +++ C    +  +  QIHG +IK+GF    ++ +SLI  Y   G  D
Sbjct: 3   EFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFD 62

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            + +  NG    D+     M+      G+   A+ +F  L+  G  P++Y    I+++C 
Sbjct: 63  EAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCN 122

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
                +  K +H   +K G   +  V +AVI  Y K G ++ A   F    N  ++I + 
Sbjct: 123 V----EEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMF-SVMNKKNLISWT 177

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            LI  Y  +G   +A++ F +++   ++       +++  CS    +D G
Sbjct: 178 ALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLG 227



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 97/197 (49%), Gaps = 7/197 (3%)

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + E GEK +E+    IL +C+ IG     + IH FVIK GF   V+V +++I  Y++ G+
Sbjct: 1   MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
              A   F+      D+   N +I+ Y   G    A+ +F  +    L P+  TF +++S
Sbjct: 61  FDEAEKVFN-GVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIIS 119

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
            C+    V++G  L   +  +YG+         ++ M  +NG +E+A  +  +M  + + 
Sbjct: 120 TCN----VEEGKQL-HGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMN-KKNL 173

Query: 720 TVYRSLLSGCRIHGNKE 736
             + +L+SG   +G  E
Sbjct: 174 ISWTALISGYTRNGYGE 190


>gi|302772569|ref|XP_002969702.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
 gi|300162213|gb|EFJ28826.1| hypothetical protein SELMODRAFT_92471 [Selaginella moellendorffii]
          Length = 689

 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 179/664 (26%), Positives = 316/664 (47%), Gaps = 17/664 (2%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           M+ KCG       +F  +   NL SWT+I++A  +NG     L +   M   G  P+   
Sbjct: 1   MFGKCGDIEVAREIFHGLWRPNLFSWTMILAACARNGRNLEALLLVRRMIGEGARPDVVC 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-GCSVLNFYAKLG--DVAAAE--RV 202
             +++ +C +    E G   H + L   +E +  V G +++N Y K    D+A A+  R+
Sbjct: 61  FVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLARAQFDRM 120

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
            +     DV  WN+++  + H GY  EA  +   M  EGI     T    L+ CS   D 
Sbjct: 121 EHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESCS--GDR 178

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
             G+  H  ++   ++    ++N+L+ MY +   ++ +  VF  +  KD+ISWN +    
Sbjct: 179 Q-GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLE 237

Query: 323 SENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +   +  +   L  +  L G   P+ VTF  ++  C  L DLDL   +Q L    GF D+
Sbjct: 238 ARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDD 297

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             + ++++ MF + G ++ A + FD +  KN+ +WN L+SGY  N      L+ F  + +
Sbjct: 298 LLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQ 357

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV+ N  TF  +++ C          ++H  I   G      + ++LI  Y    +L  
Sbjct: 358 EGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEELQF 417

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           + E     +   + +   M+SA    GH+  A+   H +  AG K D       L +CA 
Sbjct: 418 AQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGALEACAC 477

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVY-------VASAVIDAYAKCGDIKGARMAFDQSFNSN 614
              + + ++++  V+  G+ +++        +  A++  Y+KCG +  A  A  QS +S 
Sbjct: 478 SKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAAL-QSLSSR 536

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            ++ + +++ AYAH G  SEA+ +  +M+   + P    F +V+ ACSH GL+ +  +  
Sbjct: 537 GLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGLLHEALVRL 596

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             +   YG       Y C+VD+L R G L++A+ ++  MP++P    + +LL  C +HG+
Sbjct: 597 AWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACTVHGD 656

Query: 735 KELG 738
            E G
Sbjct: 657 LERG 660



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 147/643 (22%), Positives = 273/643 (42%), Gaps = 50/643 (7%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGL 99
           R D +     L L         G   H  I+  G  ++   L N LI MY KC       
Sbjct: 55  RPDVVCFVTILDLCAATADLEQGKVAHAWILACGVESSSRVLGNALINMYGKCRNLDLAR 114

Query: 100 RVFDEMAE----RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
             FD M      R++V+W  +++A   NG  +   +++ +M+  G  P+   +  V++ C
Sbjct: 115 AQFDRMEHQDHGRDVVTWNSLLAAFTHNGYLEEAARLFQEMEVEGIKPSSVTLTCVLESC 174

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
                   G   H   L + ++ + F+  S++  YA+ G +  +  VF +I   D+  WN
Sbjct: 175 ---SGDRQGKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWN 231

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            MI   A  G   EA+ ++  +  EG    D+ TFI+ +  CS + D D+   I  L+  
Sbjct: 232 VMISLEARLGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSS 291

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           +  +  + + NA+++M+ KS  +D A   F+R+  K+V+SWN L  G+++N    +   L
Sbjct: 292 AGFDDDLLLGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLEL 351

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G + N VTF  LL  C  +  LD G +L       G      V ++LI M+ +
Sbjct: 352 FRQMDQEGVKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGK 411

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           C  ++ A  + +      +   N ++S Y         +K    +  +GV+ +  T+   
Sbjct: 412 CEELQFAQELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGA 471

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSS-------CGYICSSLIKSYVNFGQLDNSFEFSN 507
           +E C  S++      ++  ++ TG+ S          I  +L+  Y   G +D++     
Sbjct: 472 LEACACSKDFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQ 531

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                 + +W +M++A  H G   EA+ +   +   G  PD+     ++ +C+  G    
Sbjct: 532 SLSSRGLLAWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHAGL--- 588

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              +H  +++L +             Y   G   GA +             Y  ++    
Sbjct: 589 ---LHEALVRLAW------------VYGDYGTAMGAGL-------------YECVVDVLG 620

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
             G + EA E+   M     +P    +++++ AC+  G +++G
Sbjct: 621 RMGRLQEAEELMHAMP---YEPDSLAWMALLGACTVHGDLERG 660



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 227/500 (45%), Gaps = 24/500 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++ LG   D FL N+L+ MY++CG       VF  + +++++SW +++S   +
Sbjct: 180 GKLFHDRVLDLGLQGDEFLMNSLVKMYARCGRLEESRLVFRAIDQKDIISWNVMISLEAR 239

Query: 123 NGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            G  +  +++  ++   GF  P+E    SV+  C  +G  +  ++I         + +  
Sbjct: 240 LGSSEEAVELLREIDLEGFPEPDEVTFISVVDACSCLGDLDLCFTIQELVSSAGFDDDLL 299

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G +V+N + K G + AA   F  +   +V  WN +I GYA    G   L +   M  EG
Sbjct: 300 LGNAVVNMFGKSGCLDAARATFDRLPVKNVVSWNCLISGYAQNLQGRRCLELFRQMDQEG 359

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF++ L  CS +   D GR++H  I  + +E    +  ALI+MY K   + +A 
Sbjct: 360 VKANSVTFVSLLDACSTIPALDFGRELHLRITAAGLELHTVVATALINMYGKCEELQFAQ 419

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++ ER     +++ N +   +++  +  +     H   L+G + + VT+   L  C    
Sbjct: 420 ELLERYQSTGLVACNVMISAYAQVGHSERAMKFLHGMDLAGVKADVVTYIGALEACACSK 479

Query: 362 DLDLGLQLQCLALHCGFLDE-------ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           D   G  +    +  G++ +       + +  +L+ M+ +CG V+ A +   ++S + + 
Sbjct: 480 DFSKGQAVYDRVVSTGWISQLLSSWTSDAIKGALLGMYSKCGCVDDALAALQSLSSRGLL 539

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W  +L+ Y      ++ L+    +   GV  +   F  VV  C  +      G +H A+
Sbjct: 540 AWTSMLAAYAHVGRASEALRVLGQMQHDGVVPDDVAFSAVVFACSHA------GLLHEAL 593

Query: 475 IKTGFSSCGY---ICSSLIKSYVN----FGQLDNSFEFSNGAE-RLDMASWGAMMSA-LV 525
           ++  +    Y   + + L +  V+     G+L  + E  +      D  +W A++ A  V
Sbjct: 594 VRLAWVYGDYGTAMGAGLYECVVDVLGRMGRLQEAEELMHAMPYEPDSLAWMALLGACTV 653

Query: 526 HQGHNHEAVTIFH-SLVEAG 544
           H      A T  H +L+++G
Sbjct: 654 HGDLERGARTAGHEALLDSG 673


>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 181/700 (25%), Positives = 332/700 (47%), Gaps = 45/700 (6%)

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN---GFMPNEFAVGSVMKV 154
            L+   E A ++L+ +  +++   ++  +   L+++  + ++      P+ + + + + V
Sbjct: 10  SLKTIAESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAV 69

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV--- 211
           C +     FG  +H +A++  ++  P V  +VL+ YAK+ D  + +R F  I   DV   
Sbjct: 70  CANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSW 129

Query: 212 ----------------------------GCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
                                        CWNAMI G A  G  + A+N    M   G+ 
Sbjct: 130 TTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVK 189

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D Y+F   L  C+   + D+GRQ+H  +I++      S+VNALI MY     ++ A++V
Sbjct: 190 PDNYSFACILSLCTKEIE-DLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEV 248

Query: 304 FERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           FE      +D I++N +  G    +   +   +F     +   P  +TF  ++  C  + 
Sbjct: 249 FEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSII- 307

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
              +  Q+   A+  GF     V +S I M+  CG  + A++VF  +  K++ +WN ++S
Sbjct: 308 --QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIIS 365

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y         +  F  +  +G+  +  TF  ++     SE  ++V  +H  + K G   
Sbjct: 366 SYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGV---SEFIEIVEMVHAYVYKNGLIL 422

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              I ++L+ +Y    ++  S +  +     ++ SW  ++   +  G   +A+  F  L+
Sbjct: 423 IIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLI 482

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            +  KP  + L  +L+ CA I      K IH ++++ G ++E  + + +I  Y+KCG + 
Sbjct: 483 MSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLG 542

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK-LANLQPSQATFVSVMSA 660
            +   F+      D++ +N++I AYA HG   EA++ F  M+ + ++ P QATF +++SA
Sbjct: 543 WSLRTFNVMIE-RDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSA 601

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV++ C +   M   Y   PS D   C+VD++ R+GY++ A+ VIE   +     
Sbjct: 602 CSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESAQYGEHTH 661

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+ +L S C  H N  LG   +  LL     N + +V+LS
Sbjct: 662 VWWALFSACAAHENLRLGRIVARILLEKERDNPSVYVVLS 701



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/626 (22%), Positives = 269/626 (42%), Gaps = 44/626 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   L+ +L++  N +    G+Q+HG+ ++ G      + N ++++Y+K   F    
Sbjct: 56  IKPDHYNLSTTLAVCANFRDIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLK 115

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM--------------------------- 132
           R F E+ + ++ SWT ++SA  + G  +   +M                           
Sbjct: 116 RGFQEIEKPDVYSWTTLLSACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWV 175

Query: 133 ----YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
               + +M   G  P+ ++   ++ +C +    + G  +H   +K    +   V  +++ 
Sbjct: 176 AMNTFYEMHKMGVKPDNYSFACILSLC-TKEIEDLGRQVHSSVIKAGYLRKTSVVNALIT 234

Query: 189 FYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
            Y  + ++  A  VF    S+  D   +N MI G        EAL +   M    ++  +
Sbjct: 235 MYFSIENLEDAYEVFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTE 294

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            TF++ +  CS++    + +Q+H   I+   E    + N+ I MY        A  VF+ 
Sbjct: 295 LTFVSIMSSCSII---QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQM 351

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           + +KD+ISWN +   + +  N G++A L F +   +G  P+  TF  LL   G    +++
Sbjct: 352 LIEKDLISWNAIISSYVQG-NFGKSAVLAFLQMQRTGIGPDEFTFGSLL---GVSEFIEI 407

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
              +       G +    + ++L+  + +C  V+ +  VF  ++ KNI +WN ++ G+  
Sbjct: 408 VEMVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLL 467

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N      L+ F  +  S ++ +  T   V+  C       +  QIHG I+++G SS   +
Sbjct: 468 NGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSL 527

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           C+ LI  Y   G L  S    N     D+ SW +++SA    G   EAV  F ++ +   
Sbjct: 528 CNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPS 587

Query: 546 -KPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             PD+    TIL++C+  G  +   + +   +I       V   S ++D   + G I  A
Sbjct: 588 IMPDQATFTTILSACSHAGLVEEACQILDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQA 647

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHH 629
               + +       V+  L  A A H
Sbjct: 648 ESVIESAQYGEHTHVWWALFSACAAH 673



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 1/126 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+     L+  LS+  N+ +  +G Q+HG+I++ G +++  L N LI MYSKCG  GW
Sbjct: 484 SKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGW 543

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCV 156
            LR F+ M ER++VSW  I+SA  Q+G+    +  +  M+     MP++    +++  C 
Sbjct: 544 SLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACS 603

Query: 157 SMGASE 162
             G  E
Sbjct: 604 HAGLVE 609


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 166/614 (27%), Positives = 314/614 (51%), Gaps = 12/614 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V + C ++  ++    +H   L +   ++  +   ++  YA LGD++ +   F  I   +
Sbjct: 57  VFRSCTNINVAK---QLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +  WN+M+  Y   G   ++++ V+ +L   G+  D YTF   L+ C  +AD   G ++H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMH 170

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
             +++   E  + +  +LI +Y +   ++ A KVF  M  +DV SWN +  GF +N N  
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   +  +      + + VT S +L  C +  D+  G+ +    +  G   +  V+++LI
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ + G ++ A  VFD +  +++ +WN +++ Y  N      L  F  +   G+  +  
Sbjct: 291 NMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLL 350

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
           T   +     +  ++++   +HG +++  +      I ++L+  Y   G +D +      
Sbjct: 351 TVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQ 410

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK--PDEYILGTILNSCAAIGAYQ 566
               D+ SW  +++     G   EA+  + +++E G    P++    +IL + + +GA Q
Sbjct: 411 LPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQ 469

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
           +   IH  +IK     +V+VA+ +ID Y KCG ++ A M+          + +N +I + 
Sbjct: 470 QGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDA-MSLFYEIPQETSVPWNAIISSL 528

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             HG   +A+++F  M+   ++    TFVS++SACSH GLVD+    F +M  +Y ++P+
Sbjct: 529 GIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPN 588

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
              YGC+VD+  R GYLE A +++  MP Q   +++ +LL+ CRIHGN ELG +AS++LL
Sbjct: 589 LKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLL 648

Query: 747 LLLPKNDAAHVLLS 760
            +  +N   +VLLS
Sbjct: 649 EVDSENVGYYVLLS 662



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 155/640 (24%), Positives = 299/640 (46%), Gaps = 29/640 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +  Q+H  ++ LG   D+ L   L+ +Y+  G        F  +  +N+ SW  +VSA +
Sbjct: 66  VAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYV 125

Query: 122 QNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + G +   +    ++ + +G  P+ +    V+K C+S+   E    +HC+ LK+  E + 
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGE---KMHCWVLKMGFEHDV 182

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  S+++ Y++ G V  A +VF  +   DVG WNAMI G+   G   EAL V+  M  E
Sbjct: 183 YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTE 242

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            + MD  T  + L  C+   D   G  +H  +I+  +E  + + NALI+MY K   +  A
Sbjct: 243 EVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDA 302

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VF+ M  +D++SWN++   + +N +P      F + +  G RP+ +T   L    G+L
Sbjct: 303 QRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQL 362

Query: 361 LDLDLGLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            D  +G  +    + C +L+ + V  ++L+ M+ + G+++ A +VF+ +  +++ +WN L
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTL 422

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           ++GY  N   ++ +  + N+ E G  +  N  T+  ++         Q   +IHG +IK 
Sbjct: 423 ITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKN 481

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++ + LI  Y   G+L+++        +     W A++S+L   GH  +A+ +F
Sbjct: 482 CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLF 541

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIG----------AYQRTKSIHPFVIKLGFNTEVYVA 587
             +   G K D     ++L++C+  G            Q+   I P +   G        
Sbjct: 542 KDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYG-------- 593

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
             ++D + + G ++ A           D  ++ TL+ A   HG  +  +  F   +L  +
Sbjct: 594 -CMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHG--NAELGTFASDRLLEV 650

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
                 +  ++S         +G +  +S+    G++ +P
Sbjct: 651 DSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTP 690



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 243/507 (47%), Gaps = 29/507 (5%)

Query: 32  NQFCSDSFLRKD----PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA 87
            +  S S +R D    P  L   LSL++       G ++H  ++K+GF +D+++  +LI 
Sbjct: 138 TELLSLSGVRPDFYTFPPVLKACLSLAD-------GEKMHCWVLKMGFEHDVYVAASLIH 190

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           +YS+ G      +VF +M  R++ SW  ++S   QNG     L++   MKT     +   
Sbjct: 191 LYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVT 250

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           V S++ +C        G  +H + +K  +E + FV  +++N Y+K G +  A+RVF  + 
Sbjct: 251 VSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGME 310

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             D+  WN++I  Y        AL     MLF G+  D  T ++       ++D  IGR 
Sbjct: 311 VRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRA 370

Query: 268 IHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           +HG ++R   +E  I I NAL++MY K   +D A  VFE++  +DVISWNTL  G+++N 
Sbjct: 371 VHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNG 430

Query: 327 NPGQTASLFHKFILSGSR---PNHVTFSILLRQCGKLLDLDLGLQLQC-LALHCGFLDEE 382
              +    ++  ++   R   PN  T+  +L     +  L  G+++   L  +C FLD  
Sbjct: 431 LASEAIDAYN--MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLD-V 487

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V + LI M+ +CG +E A S+F  +  +    WN ++S    +      L+ F ++   
Sbjct: 488 FVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRAD 547

Query: 443 GVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAI-IKTGFSSCGYICSSLIKSYVNFG 497
           GV+ +  TF  ++  C  S    E Q     +     IK      G     ++  +   G
Sbjct: 548 GVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYG----CMVDLFGRAG 603

Query: 498 QLDNSFEF-SNGAERLDMASWGAMMSA 523
            L+ ++   SN   + D + WG +++A
Sbjct: 604 YLEKAYNLVSNMPIQADASIWGTLLAA 630


>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
 gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
          Length = 610

 Score =  275 bits (704), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 262/508 (51%), Gaps = 5/508 (0%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF   L+ C+  AD   GR +H  +    +        AL +MY K      A +VF+RM
Sbjct: 61  TFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRM 120

Query: 308 ADKDVISWNTLFGGFSENKNPG--QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
             +D ++WN L  G++ N  P     A +  +    G +P+ +T   +L  C     L  
Sbjct: 121 PARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGA 180

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
             ++   AL  G  +  NV+++++  +C+CGAVE A +VFD +  +N  +WN ++ GY  
Sbjct: 181 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAE 240

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           N   ++ L  F  + + GV+V        ++ C          ++H  +++ G  S   +
Sbjct: 241 NGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSV 300

Query: 486 CSSLIKSYVNFGQLD-NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
            ++LI +Y    + D  +  F+    +    SW AM+      G + +A  +F  +    
Sbjct: 301 MNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLEN 360

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPD + L +++ + A I    + + IH + I+   + ++YV +A+ID Y+KCG +  AR
Sbjct: 361 VKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIAR 420

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD S     VI +N +I  Y  HG    A+E+F++MK     P++ TF+SV++ACSH 
Sbjct: 421 KLFD-SARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHA 479

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLVD+G   F SM   YG++P  + YG LVD+L R G +++A   I+ MP +P  +VY +
Sbjct: 480 GLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGA 538

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +L  C++H N EL E +++K+  L P+ 
Sbjct: 539 MLGACKLHKNVELAEESAQKIFELGPEE 566



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 239/531 (45%), Gaps = 34/531 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  +   G  ++      L  MY KC       RVFD M  R+ V+W  +V+   +
Sbjct: 78  GRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPARDRVAWNALVAGYAR 137

Query: 123 NGEFDMGLKMYVDMK--TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NG   + ++  V M+    G  P+   + SV+  C           +H FAL+  +++  
Sbjct: 138 NGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACREVHAFALRAGLDELV 197

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  +VL+ Y K G V AA  VF  +   +   WNAMI GYA  G   EAL +   M+ E
Sbjct: 198 NVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNASEALALFWRMVQE 257

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+ +     + ALQ C  +   D  R++H L++R  ++ ++S++NALI  Y K    D A
Sbjct: 258 GVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNALITTYSKCKRADLA 317

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
              F  +   K  ISWN +  GF++N        LF +  L   +P+  T   ++     
Sbjct: 318 AHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKPDSFTLVSVIPAVAD 377

Query: 360 LLDLDLGLQLQCLALHCGF-----LDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           + D      LQ   +H G+     LD++  V ++LI M+ +CG V +A  +FD+   +++
Sbjct: 378 ISD-----PLQARWIH-GYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFDSARDRHV 431

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQ 469
            TWN ++ GY  +      ++ F  +  +G   N  TF  V+  C  +    E ++    
Sbjct: 432 ITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGRKYFAS 491

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSALVHQG 528
           +    ++ G    G +   L ++    G++D ++ F  N      ++ +GAM+ A     
Sbjct: 492 MKDYGLEPGMEHYGTLVDLLGRA----GKVDEAWSFIQNMPIEPGISVYGAMLGACKLHK 547

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNS-------CAAIGAYQRTKSIH 572
           +   A      + E G  P+E  L   +N+       C  IG  Q+ K ++
Sbjct: 548 NVELAEESAQKIFELG--PEEGSLSQTMNASMEELARCPGIGE-QKVKCLY 595



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/547 (21%), Positives = 221/547 (40%), Gaps = 13/547 (2%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           +++K+C +      G ++H       +        ++ N Y K      A RVF  + + 
Sbjct: 64  ALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPAR 123

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GITMDKYTFINALQGCSLVADFDIGRQ 267
           D   WNA++ GYA  G    A+  V  M  E  G   D  T ++ L  C+        R+
Sbjct: 124 DRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACRE 183

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H   +R+ ++  +++  A++D Y K   ++ A  VF+ M  ++ +SWN +  G++EN N
Sbjct: 184 VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGN 243

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +  +LF + +  G           L+ C +L  LD   ++  L +  G     +V ++
Sbjct: 244 ASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNA 303

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           LI  + +C   ++A   F+ +  K    +WN ++ G+  N C  D  + F  +    V+ 
Sbjct: 304 LITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKP 363

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  T   V+       +      IHG  I+       Y+ ++LI  Y   G++  + +  
Sbjct: 364 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLF 423

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           + A    + +W AM+      G    AV +F  +   G  P+E    ++L +C+  G   
Sbjct: 424 DSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 483

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             +     +   G    +     ++D   + G +  A            + VY  ++ A 
Sbjct: 484 EGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGAMLGAC 543

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA-------CSHKGLVDKGCLLFKSMDS 679
             H  V  A E     K+  L P + +    M+A       C   G     C L+ SM  
Sbjct: 544 KLHKNVELAEE--SAQKIFELGPEEGSLSQTMNASMEELARCPGIGEQKVKC-LYDSMSH 600

Query: 680 QYGMQPS 686
             G  P+
Sbjct: 601 SNGFLPA 607



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 5/370 (1%)

Query: 59  SRVLGT--QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +RVLG   +VH   ++ G    + +   ++  Y KCG       VFD M  RN VSW  +
Sbjct: 175 ARVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAM 234

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +    +NG     L ++  M   G    + AV + ++ C  +G  +    +H   +++ +
Sbjct: 235 IDGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGL 294

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG-CWNAMIGGYAHCGYGFEALNVVS 235
           + N  V  +++  Y+K      A   F  +        WNAMI G+   G   +A  + +
Sbjct: 295 KSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFA 354

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  E +  D +T ++ +   + ++D    R IHG  IR +++  I ++ ALIDMY K  
Sbjct: 355 RMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCG 414

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +  A K+F+   D+ VI+WN +  G+  +        LF +   +GS PN  TF  +L 
Sbjct: 415 RVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLA 474

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
            C     +D G +        G         +L+ +  R G V+ A S   N+  +  I+
Sbjct: 475 ACSHAGLVDEGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGIS 534

Query: 415 TWNELLSGYC 424
            +  +L G C
Sbjct: 535 VYGAML-GAC 543



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 144/321 (44%), Gaps = 2/321 (0%)

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RP   TF+ LL+ C    DL  G  +       G   E    ++L  M+ +C     A  
Sbjct: 56  RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW--ESGVEVNGCTFFYVVETCCRS 461
           VFD +  ++   WN L++GY  N   A  ++    +   E G + +  T   V+  C  +
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
                  ++H   ++ G      + ++++ +Y   G ++ +    +     +  SW AM+
Sbjct: 176 RVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMI 235

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
                 G+  EA+ +F  +V+ G    +  +   L +C  +G     + +H  ++++G  
Sbjct: 236 DGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLK 295

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           + V V +A+I  Y+KC     A  AF++       I +N +I+ +  +G   +A  +F +
Sbjct: 296 SNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFAR 355

Query: 642 MKLANLQPSQATFVSVMSACS 662
           M+L N++P   T VSV+ A +
Sbjct: 356 MQLENVKPDSFTLVSVIPAVA 376



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           +S+ L++R     +HG+ ++     DI++   LI MYSKCG      ++FD   +R++++
Sbjct: 378 ISDPLQAR----WIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFDSARDRHVIT 433

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           W  ++     +G   + ++++ +MK  G +PNE    SV+  C   G  + G
Sbjct: 434 WNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG 485


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 178/600 (29%), Positives = 304/600 (50%), Gaps = 8/600 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   L + I  +  +   +   YA+    + A  +F  +S   +  WNAM+  Y   G 
Sbjct: 33  LHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIGR 92

Query: 227 GFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
            F+ALN+   ML  G T+ DK+T+   ++ C  ++  D+G  IHG   +   +    + N
Sbjct: 93  PFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQN 152

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L+ MY+ +   + A  VF+ M ++ VISWNT+  G+  N       +++ + +  G  P
Sbjct: 153 TLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEP 212

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T   +L  CG L +++LG ++  L    GF     V ++L+ M+ +CG ++ A  + 
Sbjct: 213 DCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLA 272

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQ 464
             +  K++ TW  L++GY  N  DA      C + +  GV+ N  +   ++  C      
Sbjct: 273 KGMDDKDVVTWTTLINGYILNG-DARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYL 331

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYV--NFGQLDNSFEFSNGAERLDMASWGAMMS 522
                +H   I+    S   + ++LI  Y   N G L  S++   G  +   A W A++S
Sbjct: 332 NHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNL--SYKVFMGTSKKRTAPWNALLS 389

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
             +      EA+ +F  ++    +PD     ++L + A +   Q+  +IH ++I+ GF  
Sbjct: 390 GFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLY 449

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            + VAS ++D Y+KCG +  A   F+  S    D+I+++ +I AY  HG    A+++F++
Sbjct: 450 RLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQ 509

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M  + ++P+  TF SV+ ACSH GLV++G  LF  M  Q+ +    D Y C++D+L R G
Sbjct: 510 MVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAG 569

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
            L DA ++I  MP  P+  V+ +LL  C IH N ELGE A+     L P+N   +VLL+K
Sbjct: 570 RLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAK 629



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 251/516 (48%), Gaps = 3/516 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  I+ LG  +   L + L   Y++C +  +   +FD++++  L SW  ++   +Q G
Sbjct: 32  RLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIG 91

Query: 125 EFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                L ++V+M  +G  +P++F    V+K C  +   + G  IH    K   + + FV 
Sbjct: 92  RPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQ 151

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++L  Y   G+  AA+ VF  +    V  WN MI GY       +A+NV   M+  G+ 
Sbjct: 152 NTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVE 211

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T ++ L  C L+ + ++GR++H L+       +I + NAL+DMY+K   M  A+ +
Sbjct: 212 PDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLL 271

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
            + M DKDV++W TL  G+  N +      L       G +PN V+ + LL  CG L+ L
Sbjct: 272 AKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYL 331

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G  L   A+      E  V ++LI M+ +C    +++ VF   S K    WN LLSG+
Sbjct: 332 NHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGF 391

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    + ++ F  +    V+ +  TF  ++       + Q    IH  +I++GF    
Sbjct: 392 IQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRL 451

Query: 484 YICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            + S L+  Y   G L  + +  N    +  D+  W A+++A    GH   AV +F+ +V
Sbjct: 452 EVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMV 511

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           ++G KP+     ++L++C+  G      S+  F++K
Sbjct: 512 QSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLK 547



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 253/570 (44%), Gaps = 35/570 (6%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
            + G+ +   D F     I     LSL +      +G  +HG   K G+ +D F+QN L+
Sbjct: 102 EMLGSGRTLPDKFTYPVVIKACGDLSLID------VGVGIHGQTFKFGYDSDTFVQNTLL 155

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
           AMY   G       VFD M ER ++SW  +++   +N   +  + +Y  M   G  P+  
Sbjct: 156 AMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCA 215

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            V SV+  C  +   E G  +H    +     N  V  ++++ Y K G +  A  +   +
Sbjct: 216 TVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGM 275

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              DV  W  +I GY   G    AL +   M  EG+  +  +  + L  C  +   + G+
Sbjct: 276 DDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGK 335

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            +H   IR ++E  + +  ALI+MY K +  + ++KVF   + K    WN L  GF +N+
Sbjct: 336 CLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNR 395

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +   LF + ++   +P+H TF+ LL     L DL   + + C  +  GFL    V S
Sbjct: 396 LAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVAS 455

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            L+ ++ +CG++  AH +F+ +S   K+I  W+ +++ Y  +      +K F  + +SGV
Sbjct: 456 ILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGV 515

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS-LIKSYVNF------- 496
           + N  TF  V+  C            H  ++  GFS   ++     I S+V+        
Sbjct: 516 KPNHVTFTSVLHACS-----------HAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDL 564

Query: 497 ----GQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHNHEAVTIFHSLVEAGEKPDEY 550
               G+L++++          + A WGA++ A ++H+      V    +     E    Y
Sbjct: 565 LGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNY 624

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +L   L   AA+G +   + +   V ++G 
Sbjct: 625 VLLAKLY--AAVGRWGDAERVRDMVNEVGL 652



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 221/456 (48%), Gaps = 11/456 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           +++H LI+   +  S ++ + L   Y +     YA  +F++++   + SWN +   + + 
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 326 KNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
             P    +LF + + SG + P+  T+ ++++ CG L  +D+G+ +       G+  +  V
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+   G  E A  VFD +  + + +WN +++GY  N C  D +  +  + + GV
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           E +  T   V+  C   +N ++  ++H  + + GF     + ++L+  YV  GQ+  ++ 
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
            + G +  D+ +W  +++  +  G    A+ +   +   G KP+   + ++L++C ++  
Sbjct: 271 LAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVY 330

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
               K +H + I+    +EV V +A+I+ YAKC     +   F    +      +N L+ 
Sbjct: 331 LNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVF-MGTSKKRTAPWNALLS 389

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA----CSHKGLVDKGCLLFKSMDSQ 680
            +  + L  EA+E+F +M + ++QP  ATF S++ A       +  ++  C L +S    
Sbjct: 390 GFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRS---- 445

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            G     +    LVD+ S+ G L  A  +  I+  +
Sbjct: 446 -GFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLK 480



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 128/275 (46%), Gaps = 4/275 (1%)

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S++     ++H  I+  G  S   +CS L  +Y        +    +   +  + SW AM
Sbjct: 24  SQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAM 83

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M   V  G   +A+ +F  ++ +G   PD++    ++ +C  +        IH    K G
Sbjct: 84  MRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFG 143

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           ++++ +V + ++  Y   G+ + A++ FD       VI +NT+I  Y  +    +A+ ++
Sbjct: 144 YDSDTFVQNTLLAMYMNAGEKEAAQLVFD-PMQERTVISWNTMINGYFRNNCAEDAVNVY 202

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +M    ++P  AT VSV+ AC     V+ G  +  ++  + G   +      LVDM  +
Sbjct: 203 GRMMDVGVEPDCATVVSVLPACGLLKNVELGREV-HTLVQEKGFWGNIVVRNALVDMYVK 261

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            G +++A  + + M  +   T + +L++G  ++G+
Sbjct: 262 CGQMKEAWLLAKGMDDKDVVT-WTTLINGYILNGD 295



 Score = 41.2 bits (95), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 6/177 (3%)

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++L   +A  ++  TK +H  ++ LG  +   + S +   YA+C     A   FD+  + 
Sbjct: 16  SLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDK-LSQ 74

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             +  +N ++  Y   G   +A+ +F +M       P + T+  V+ AC    L+D G +
Sbjct: 75  PCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVG-V 133

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV-YRSLLSG 728
                  ++G          L+ M    G  E A+ V +  P Q    + + ++++G
Sbjct: 134 GIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFD--PMQERTVISWNTMING 188


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 171/633 (27%), Positives = 310/633 (48%), Gaps = 15/633 (2%)

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDV 196
           ++G  P+ F +   +K C      + G  +H  A K+ + + +PFVG S+++ Y + G V
Sbjct: 60  SDGVAPDRFTLPPALKSC----RGDDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRV 115

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             AE+VF  ++  ++  WNA++   A    G E        L      D+ T +  L  C
Sbjct: 116 DDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMC 175

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM---DYAFKVFERMADKDVI 313
           + +A  + GR +HGL ++S  + +  + N L+DMY K   M   + AF      A ++V+
Sbjct: 176 AALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVV 235

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILS--GSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           SWN + GG++ N   G    L  +  +   G   + +T   +L  C  L +L    +L  
Sbjct: 236 SWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHA 295

Query: 372 LALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             +  G  L  + V ++LI  + RCG +  A  VFD +  K +++WN L+  +  N   +
Sbjct: 296 FVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEAS 355

Query: 431 DVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
             ++ F  +  + G + +  +   ++  C   ++       HG I++ G     +I  SL
Sbjct: 356 AAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSL 415

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV--EAGEKP 547
           +  Y+  G+   +    +  E  D  SW  M++     G   E++ +F  +   + G  P
Sbjct: 416 LSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWP 475

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
                 + L +C+ + A +  K +H F +K     + +++S++ID Y+KCG +  AR+ F
Sbjct: 476 SLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFF 535

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D+   + D + +  +I  YA +G   EA+ ++DKM    ++P   T++ ++ AC H G++
Sbjct: 536 DR-LKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGML 594

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           + G   F+ M +   ++   + Y C++ MLSR G   DA  ++E+MP +P   +  S+LS
Sbjct: 595 EDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLS 654

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C +HG  ELG+  ++KLL L P     +VL S
Sbjct: 655 ACHMHGEVELGKKVADKLLELEPHKAEHYVLAS 687



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/615 (26%), Positives = 280/615 (45%), Gaps = 41/615 (6%)

Query: 63  GTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G QVH    KLG  + D F+ N+L++MY +CG      +VF+ MA RNLVSW  +++A  
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV- 140

Query: 122 QNGEFDMGLKMYVDMKTN---GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              +   GL+++ D   +      P+E  + +V+ +C ++   E G ++H  A+K   + 
Sbjct: 141 --ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            P V   +++ YAK G++A AE  F      +  +V  WN M+GGYA  G    A  ++ 
Sbjct: 199 APRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLR 258

Query: 236 SMLFE--GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYI 292
            M  E  G+  D+ T ++ L  CS + +    R++H  ++R  +  +  +V NALI  Y 
Sbjct: 259 EMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYG 318

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFS 351
           +   + +A +VF+ +  K V SWN L G  ++N        LF +   + G +P+  +  
Sbjct: 319 RCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIG 378

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            LL  CG L  L  G       L  G   +  +  SL+ ++ +CG   +A  +FD V  K
Sbjct: 379 SLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEK 438

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNI-------WESGVEVNGCTFFYVVETCCRSENQ 464
           +  +WN +++GY  N    + L+ F  +       W S +             C      
Sbjct: 439 DEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALV-----ACSELPAV 493

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           ++  ++H   +K       ++ SS+I  Y   G +D++  F +  +  D  SW  M++  
Sbjct: 494 RLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGY 553

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-------YQRTKSIHPFVIK 577
              G   EAV ++  +   G +PD +    +L +C   G        +Q  +++     K
Sbjct: 554 AVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAK 613

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           L    E Y  + VI   ++ G    A    +      D  + ++++ A   HG V    +
Sbjct: 614 L----EHY--ACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKK 667

Query: 638 IFDKMKLANLQPSQA 652
           + D  KL  L+P +A
Sbjct: 668 VAD--KLLELEPHKA 680



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 2/203 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NLK  + G   HG I++ G   D F++ +L+++Y +CG       +FD + E++ VSW  
Sbjct: 386 NLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNT 445

Query: 116 IVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +++   QNG     L+++ +M  K  G  P+  A  S +  C  + A   G  +HCFALK
Sbjct: 446 MIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALK 505

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             + ++ F+  S+++ Y+K G V  A   F  + + D   W  MI GYA  G G EA+ +
Sbjct: 506 ADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGL 565

Query: 234 VSSMLFEGITMDKYTFINALQGC 256
              M  EG+  D +T++  L  C
Sbjct: 566 YDKMGREGMEPDGFTYLGLLMAC 588



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 5/134 (3%)

Query: 44  PIFLAKSLSL--SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           P  LA + +L     L +  LG ++H   +K     D FL +++I MYSKCG        
Sbjct: 475 PSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVF 534

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           FD +  ++ VSWT++++    NG     + +Y  M   G  P+ F    ++  C   G  
Sbjct: 535 FDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGML 594

Query: 162 EFGYSIHCFALKIR 175
           E G    CF  ++R
Sbjct: 595 EDGL---CFFQEMR 605


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 169/596 (28%), Positives = 299/596 (50%), Gaps = 14/596 (2%)

Query: 171 ALKIRIEKNP----FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           A  +R+   P     + C  L+   K G ++ A  +F  +   +V  W   I G    G 
Sbjct: 29  AANVRLGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQ 88

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIV 284
              A  + + ML  G+  + +    AL  C+        +G Q+H L +R+       I 
Sbjct: 89  PEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIG 148

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           + LI++Y +   M  A +VF RM   DV+ + +L      N +  +   +  + +  G +
Sbjct: 149 SCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQ 208

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  T + +L +C +++    G Q+    L          +++LI  + R G  +MA +V
Sbjct: 209 PNEHTMTSMLAECPRMI----GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETV 264

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+N+  KN+ +W  ++     +    D L+ F  +    VE N   F   +  C    + 
Sbjct: 265 FENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSV 321

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
            +  QIH + IK    +   + ++L+  Y   G +          E  D+ SW A +SA 
Sbjct: 322 CLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISAN 381

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G + +AV +   +   G  P++Y   + L+SCA +    + + +H   +KLG + +V
Sbjct: 382 FQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKV 441

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
              +A+I+ Y+KCG I  AR+AFD   N +DV+ +N+LI   A HG  +  +E F +M  
Sbjct: 442 CTGNALINMYSKCGQIGSARLAFD-VMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCS 500

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           +  QP  +TF++V+  C+H GLV +G   F+ M  +YG+ P+P  Y C++DML RNG  +
Sbjct: 501 SGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFD 560

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A H+I+ MPF+P   ++++LL+ C++H N ++G+ A++KL+ L  ++ A++VL+S
Sbjct: 561 EALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMS 616



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 200/417 (47%), Gaps = 18/417 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH   V+ GF  D ++ + LI +YS+CG       VF  M   ++V +T +VSA  
Sbjct: 128 LGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALC 187

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG+    +++   M   G  PNE  + S++  C  M     G  IH + LK+   ++ +
Sbjct: 188 RNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVY 243

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++FY++ GD   AE VF ++ S +V  W +M+      G   +AL V S M+ E 
Sbjct: 244 ASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEA 303

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +++ F  AL  C  V    +GRQIH   I+  +   I + NAL+ MY +S  +    
Sbjct: 304 VEPNEFAFSIALGACGSVC---LGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVE 360

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            V  ++ + D++SW        +N    +  +L  +    G  PN   FS  L  C  L 
Sbjct: 361 AVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLA 420

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G QL CLAL  G   +    ++LI M+ +CG +  A   FD ++  ++ +WN L+ 
Sbjct: 421 LLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIH 480

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           G   +     VL+ F  +  SG + +  TF  V           +VG  H  ++K G
Sbjct: 481 GLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAV-----------LVGCNHAGLVKEG 526



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/573 (23%), Positives = 244/573 (42%), Gaps = 30/573 (5%)

Query: 71  VKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
           V+LG     D+ L    +    K G     L +FD M  +N+V+WT  +S   +NG+ + 
Sbjct: 32  VRLGAPPPPDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEA 91

Query: 129 GLKMYVDMKTNGFMPNEF--AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
              M+ DM  +G   N+F              GA   G  +H  A++     + ++G  +
Sbjct: 92  AAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCL 151

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           +  Y++ G + AAE VF  + + DV  + +++      G    A+ V+  M+ +G+  ++
Sbjct: 152 IELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNE 211

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           +T  + L  C  +    IG QIHG +++     S+    ALID Y +    D A  VFE 
Sbjct: 212 HTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFEN 267

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           +  K+V+SW ++      +        +F + I     PN   FSI L  CG +    LG
Sbjct: 268 LDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVC---LG 324

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            Q+ C A+ C  + +  V+++L+ M+ R G V    +V   +   ++ +W   +S    N
Sbjct: 325 RQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQN 384

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-I 485
                 +     +   G   N   F   + +C          Q+H   +K G   C + +
Sbjct: 385 GFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLG---CDFKV 441

Query: 486 CS--SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           C+  +LI  Y   GQ+ ++    +     D+ SW +++  L   G  +  +  F  +  +
Sbjct: 442 CTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSS 501

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +PD+     +L  C   G  +  ++    +      T+ Y  +     YA   D+ G 
Sbjct: 502 GWQPDDSTFIAVLVGCNHAGLVKEGETFFRLM------TDRYGLTPTPSHYACMIDMLGR 555

Query: 604 RMAFDQSFN-------SNDVIVYNTLIMAYAHH 629
              FD++ +         DV+++ TL+ +   H
Sbjct: 556 NGRFDEALHMIKNMPFEPDVLIWKTLLASCKLH 588



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 177/364 (48%), Gaps = 5/364 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R++G Q+HG+++K+  +  ++    LI  YS+ G F     VF+ +  +N+VSW  ++  
Sbjct: 223 RMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQL 282

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            I++G  +  L+++ +M +    PNEFA    +  C   G+   G  IHC A+K  +  +
Sbjct: 283 CIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLMTD 339

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++L+ Y + G V+  E V   I + D+  W A I      G+  +A+ ++  M  
Sbjct: 340 IRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHS 399

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG T + Y F + L  C+ +A  D GRQ+H L ++   +  +   NALI+MY K   +  
Sbjct: 400 EGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGS 459

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+ M   DV+SWN+L  G +++         F +   SG +P+  TF  +L  C  
Sbjct: 460 ARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNH 519

Query: 360 LLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWN 417
              +  G    + +    G     +  + +I M  R G  + A  +  N+ ++ ++  W 
Sbjct: 520 AGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWK 579

Query: 418 ELLS 421
            LL+
Sbjct: 580 TLLA 583



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G+      V  ++   +LVSWT  +SA  
Sbjct: 323 LGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANF 382

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + + + M + GF PN++A  S +  C  +   + G  +HC ALK+  +    
Sbjct: 383 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVC 442

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  ++  DV  WN++I G A  G     L   S M   G
Sbjct: 443 TGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSG 502

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYA 300
              D  TFI  L GC+       G     L+  R  +  + S    +IDM  ++   D A
Sbjct: 503 WQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEA 562

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
             + + M  + DV+ W TL      +KN
Sbjct: 563 LHMIKNMPFEPDVLIWKTLLASCKLHKN 590


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 292/575 (50%), Gaps = 8/575 (1%)

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K GD  +A+++F  +S  ++  +N++I GY       + + +       G+ +DKY    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           AL  CS   +   G+ IHGLI+   +   + + N+LIDMY K   +DYA  +F+     D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD--LDLGLQL 369
            +SWN+L  G+ +N    +  ++  K   +G   N  T    L+ C    +     G  L
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF---- 425
              A+  G   +  V ++L+ M+ + G+++ A  +FD +  KN+  +N +++G       
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252

Query: 426 -NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            + C    L  F  +   G++ +  T+  +++ C   E+ +   Q+H  + K G  S  Y
Sbjct: 253 EDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEY 312

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I S LI  Y   G + ++    N    L +    AM+   +  G    A+++F+ L+   
Sbjct: 313 IGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYE 372

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           EKPDE+I  TI++SCA +G  +  + I     K+G +      ++ I  YAK GD+  A 
Sbjct: 373 EKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAAN 432

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           + F Q  N  D++ ++T+I + A HG   EA+  F+ MK   ++P+   F+ V+ ACSH+
Sbjct: 433 LTFQQMENP-DIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GLV++G   F +M+  Y M+       C+VD+L R G L DA+ +I  + F+  P ++R+
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           LLS CRIH +    +  ++K++ L P   A++VLL
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLL 586



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 193/405 (47%), Gaps = 11/405 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG I+  G  + + L N+LI MYSKCG   +   +FD   + + VSW  +++  +Q
Sbjct: 86  GKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQ 145

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS--MGASEFGYSIHCFALKIRIEKNP 180
           NG+++  L +   M  NG   N + +GS +K C S   G   FG  +H  A+K+ +  + 
Sbjct: 146 NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDV 205

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH-------CGYGFEALNV 233
            VG ++L+ YAK G +  A ++F  +   +V  +NAM+ G          C Y  +ALN+
Sbjct: 206 VVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAY--KALNL 263

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M   GI    +T+ + L+ C +V DF   +Q+H L+ ++ +     I + LID+Y  
Sbjct: 264 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 323

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              M  A   F  + +  ++    +  G+ +N       SLF++ +    +P+   FS +
Sbjct: 324 LGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTI 383

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           +  C  +  L  G Q+Q  A   G        +S I+M+ + G +  A+  F  +   +I
Sbjct: 384 MSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDI 443

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +W+ ++     +    + L+ F  +   G+E N   F  V+  C
Sbjct: 444 VSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC 488



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 212/482 (43%), Gaps = 11/482 (2%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG      ++FD+M++ N+V++  ++S  +Q    D  + ++   +  G   +++    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +  C   G    G  IH   L   +     +  S+++ Y+K G V  A  +F      D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD----IGR 266
              WN++I GY   G   E L ++  M   G+  + YT  +AL+ CS  ++F+     G 
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACS--SNFNGCKMFGT 190

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF---- 322
            +H   I+  +   + +  AL+DMY K+  +D A ++F++M DK+V+ +N +  G     
Sbjct: 191 MLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQE 250

Query: 323 -SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
             E+K   +  +LF +    G +P+  T+S LL+ C  + D     Q+  L    G L +
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSD 310

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
           E + S LI ++   G++  A   F+++    I     ++ GY  N      L  F  +  
Sbjct: 311 EYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLT 370

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
              + +   F  ++ +C      +   QI G   K G S      +S I  Y   G L  
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYA 430

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +       E  D+ SW  M+ +    GH  EA+  F  +   G +P+ +    +L +C+ 
Sbjct: 431 ANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSH 490

Query: 562 IG 563
            G
Sbjct: 491 RG 492



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 8/276 (2%)

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
           C+CG    A  +FD +S  NI T+N L+SGY        V+  F      G++++     
Sbjct: 12  CKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
             +  C +S N      IHG I+  G  S   + +SLI  Y   GQ+D +    + +++L
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA--IGAYQRTKS 570
           D  SW ++++  V  G   E +TI   + + G   + Y LG+ L +C++   G       
Sbjct: 132 DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTM 191

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +H   IKLG + +V V +A++D YAK G +  A   FDQ  + N V++YN ++       
Sbjct: 192 LHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKN-VVMYNAMMAGLLQQE 250

Query: 631 LVSE-----AMEIFDKMKLANLQPSQATFVSVMSAC 661
            + +     A+ +F +MK   ++PS  T+ S++ AC
Sbjct: 251 TIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKAC 286



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 5/303 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           ++ GT +H H +KLG   D+ +   L+ MY+K G     +++FD+M ++N+V +  +++ 
Sbjct: 186 KMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAG 245

Query: 120 AIQNGEFD-----MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +Q    +       L ++ +MK+ G  P+ F   S++K C+ +   +F   +H    K 
Sbjct: 246 LLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKN 305

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            +  + ++G  +++ Y+ LG +  A   F SI +  +    AMI GY   G    AL++ 
Sbjct: 306 GLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLF 365

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             +L      D++ F   +  C+ +     G QI G   +  +       N+ I MY KS
Sbjct: 366 YELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKS 425

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A   F++M + D++SW+T+    +++ +  +    F      G  PNH  F  +L
Sbjct: 426 GDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVL 485

Query: 355 RQC 357
             C
Sbjct: 486 IAC 488



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 3/211 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L K+  + E+ K      QVH  + K G  +D ++ + LI +YS  G     L  F+ + 
Sbjct: 282 LLKACIIVEDFK---FAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIH 338

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
              +V  T ++   +QNGEF+  L ++ ++ T    P+EF   ++M  C +MG    G  
Sbjct: 339 NLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQ 398

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           I   A K+ I +      S +  YAK GD+ AA   F  + + D+  W+ MI   A  G+
Sbjct: 399 IQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGH 458

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS 257
             EAL     M   GI  + + F+  L  CS
Sbjct: 459 AMEALRFFELMKSCGIEPNHFAFLGVLIACS 489



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D    +  +S   N+     G Q+ GH  K+G +     QN+ I MY+K G       
Sbjct: 374 KPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANL 433

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F +M   ++VSW+ ++ +  Q+G     L+ +  MK+ G  PN FA   V+  C   G 
Sbjct: 434 TFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGL 493

Query: 161 SEFG 164
            E G
Sbjct: 494 VEEG 497


>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 181/708 (25%), Positives = 347/708 (49%), Gaps = 28/708 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMY-------SKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           + H   V  G + ++F+ + LI++Y       S C        +F  +  ++   +   +
Sbjct: 25  RFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCS------TLFHSLPSKDTFLYNSFL 78

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
            +      F   L ++  M+ +   PN F +  V+     +     G S+H  A K  + 
Sbjct: 79  KSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLF 138

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG---YGFEALNVV 234
            +     S ++ Y++ G +  A +VF  I   DV  W A+I G+ H G    G   L  V
Sbjct: 139 HS---SASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHV 195

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ++ +    +  T+      C  +     G  +HG+++++ V   I   ++++DMY K 
Sbjct: 196 HGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVASFIQ--SSVLDMYSKC 253

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
                A++ F  +  KD++ W ++ G ++     G+   LF +   +  RP+ V    +L
Sbjct: 254 GVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVL 313

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              G  +D+  G     + +   ++D+E V  SL++M+C+ G + +A  +F  +   +  
Sbjct: 314 SGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFP-LCQGSGD 372

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            WN ++ GY     +   ++ F  +   G+          + +C +     +   IH  +
Sbjct: 373 GWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNV 432

Query: 475 IKTGFSSCGYI--CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           IK GF     I   +SL++ Y   G++  ++   N +E  D+ SW  ++S+ VH   + E
Sbjct: 433 IK-GFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNTSET-DVVSWNTLISSHVHIKQHEE 490

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           AV +F  +V   +KP+   L  +L++C+ + + ++ + +H ++ + GF   + + +A+ID
Sbjct: 491 AVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALID 550

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCG ++ +RM FD S    DVI +N +I  Y  +G    A+EIF  M+ +N+ P+  
Sbjct: 551 MYAKCGQLQKSRMVFD-SMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGI 609

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+S++SAC+H GLV++G  +F  M S Y + P+   Y C+VD+L R G +++A+ ++  
Sbjct: 610 TFLSLLSACAHAGLVEEGKYMFARMKS-YSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLS 668

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MP  P   V+ +LL  C+ H   E+G   ++  + L P+ND  +++++
Sbjct: 669 MPISPDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMA 716



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 210/415 (50%), Gaps = 21/415 (5%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL +   G+ +HG +VK G  +  F+Q++++ MYSKCG      R F E+  ++L+ WT 
Sbjct: 219 NLGAVSEGSCLHGVVVKNGVAS--FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTS 276

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-- 173
           ++    + G     L+++ +M+ N   P+   VG V+        S FG S+  F  K  
Sbjct: 277 VIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVL--------SGFGNSMDVFQGKAF 328

Query: 174 --IRIEK----NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
             + I +    +  V  S+L  Y K G ++ AER+F        G WN M+ GY   G  
Sbjct: 329 HGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSGDG-WNFMVFGYGKVGEN 387

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNA 286
            + + +   M + GI  +     +A+  C+ +   ++GR IH  +I+  ++  +IS+ N+
Sbjct: 388 VKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNS 447

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L++MY K   M +A+++F   ++ DV+SWNTL       K   +  +LF K +    +PN
Sbjct: 448 LVEMYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPN 506

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T  ++L  C  L  L+ G ++ C     GF     + ++LI M+ +CG ++ +  VFD
Sbjct: 507 TATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFD 566

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           ++  K++  WN ++SGY  N      L+ F ++ ES V  NG TF  ++  C  +
Sbjct: 567 SMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHA 621



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 148/320 (46%), Gaps = 3/320 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + +   LS   N      G   HG I++  + +D  + ++L+ MY K G      
Sbjct: 302 IRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAE 361

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F  + + +   W  +V    + GE    ++++ +M+  G       + S +  C  +G
Sbjct: 362 RIF-PLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLG 420

Query: 160 ASEFGYSIHCFALKIRIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           A   G SIHC  +K  ++ KN  V  S++  Y K G +  A R+F + S  DV  WN +I
Sbjct: 421 AVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIF-NTSETDVVSWNTLI 479

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             + H     EA+N+ S M+ E    +  T +  L  CS +A  + G ++H  I  S   
Sbjct: 480 SSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGFT 539

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++ +  ALIDMY K   +  +  VF+ M +KDVI WN +  G+  N        +F   
Sbjct: 540 LNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHM 599

Query: 339 ILSGSRPNHVTFSILLRQCG 358
             S   PN +TF  LL  C 
Sbjct: 600 EESNVMPNGITFLSLLSACA 619



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 139/301 (46%), Gaps = 12/301 (3%)

Query: 30  GNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN--DIF 80
           G N  C + F       +  + I +A +++    L +  LG  +H +++K GF +  +I 
Sbjct: 385 GENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIK-GFLDGKNIS 443

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           + N+L+ MY KCG   +  R+F+  +E ++VSW  ++S+ +   + +  + ++  M    
Sbjct: 444 VTNSLVEMYGKCGKMTFAWRIFNT-SETDVVSWNTLISSHVHIKQHEEAVNLFSKMVRED 502

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             PN   +  V+  C  + + E G  +HC+  +     N  +G ++++ YAK G +  + 
Sbjct: 503 QKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSR 562

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
            VF S+   DV CWNAMI GY   GY   AL +   M    +  +  TF++ L  C+   
Sbjct: 563 MVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAG 622

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
             + G+ +   +    V  ++     ++D+  +   +  A  +   M    D   W  L 
Sbjct: 623 LVEEGKYMFARMKSYSVNPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALL 682

Query: 320 G 320
           G
Sbjct: 683 G 683


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 176/557 (31%), Positives = 279/557 (50%), Gaps = 48/557 (8%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYI-----KSSGMDYAFKVFERMADKDVISWNTLFG 320
           +QIH  I+RS+++ S  ++  L+           S +DYA  +F  + +      N L  
Sbjct: 29  KQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRFSNQLLR 88

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            FS    P  T SL+     +G   +  +F  LL+   KL  L+LGL++  LA   GF  
Sbjct: 89  QFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFH 148

Query: 381 EEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  + S+LI M+  CG +  A  +FD +S++++ TWN ++ GY  N     VLK +  +
Sbjct: 149 ADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEM 208

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             SG E +      V+  C  + N      IH  I   GF    +I +SL+  Y N G +
Sbjct: 209 KTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAM 268

Query: 500 --------------------------------DNSFEFSNGAERLDMASWGAMMSALVHQ 527
                                           D  F F    E+ D+  W AM+S     
Sbjct: 269 HLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEK-DLVCWSAMISGYAES 327

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
               EA+ +F+ +      PD+  + +++++CA +GA  + K IH +  K GF   + + 
Sbjct: 328 YQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPIN 387

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+ID YAKCG++  AR  F+     N VI ++++I A+A HG    A+ +F +MK  N+
Sbjct: 388 NALIDMYAKCGNLVKAREVFENMPRKN-VISWSSMINAFAMHGDADSAIALFHRMKEQNI 446

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P+  TF+ V+ ACSH GLV++G   F SM +++ + P  + YGC+VD+  R  +L  A 
Sbjct: 447 EPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAM 506

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS----KRK 763
            +IE MPF P+  ++ SL+S C+ HG  ELGE+A+ +LL L P +D A V+LS    K K
Sbjct: 507 ELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEK 566

Query: 764 RQRE----GNLLDHEGV 776
           R  +      L+ H+GV
Sbjct: 567 RWDDVGLVRKLMKHKGV 583



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 44/400 (11%)

Query: 62  LGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG ++HG   K GF + D F+Q+ LIAMY+ CG       +FD+M+ R++V+W +++   
Sbjct: 133 LGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGY 192

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH------------ 168
            QN  +D  LK+Y +MKT+G  P+   + +V+  C   G   +G +IH            
Sbjct: 193 SQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGS 252

Query: 169 ------------CFALKIRIE-------KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
                       C A+ +  E       K+  V  ++L+ YAKLG V  A  +F  +   
Sbjct: 253 HIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEK 312

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+ CW+AMI GYA      EAL + + M    I  D+ T ++ +  C+ V      + IH
Sbjct: 313 DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIH 372

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
               ++    ++ I NALIDMY K   +  A +VFE M  K+VISW+++   F+ + +  
Sbjct: 373 TYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDAD 432

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS-- 387
              +LFH+       PN VTF  +L  C        GL  +        ++E  ++    
Sbjct: 433 SAIALFHRMKEQNIEPNGVTFIGVLYACSH-----AGLVEEGQKFFSSMINEHRISPQRE 487

Query: 388 ----LIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
               ++ ++CR   +  A  + + + +  N+  W  L+S 
Sbjct: 488 HYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSA 527



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 32/361 (8%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPFVGCSVLN 188
           L +Y+ ++ NGF  + F+   ++K    + A   G  IH  A K      +PF+  +++ 
Sbjct: 100 LSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIA 159

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            YA  G +  A  +F  +S  DV  WN MI GY+   +    L +   M   G   D   
Sbjct: 160 MYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAII 219

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV----- 303
               L  C+   +   G+ IH  I  +       I  +L++MY     M  A +V     
Sbjct: 220 LCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP 279

Query: 304 --------------------------FERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                                     F+RM +KD++ W+ +  G++E+  P +   LF++
Sbjct: 280 SKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNE 339

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                  P+ +T   ++  C  +  L     +   A   GF     + ++LI M+ +CG 
Sbjct: 340 MQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGN 399

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A  VF+N+  KN+ +W+ +++ +  +      +  F  + E  +E NG TF  V+  
Sbjct: 400 LVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYA 459

Query: 458 C 458
           C
Sbjct: 460 C 460



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 33/312 (10%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC---------- 92
           D I L   LS   +  +   G  +H  I   GF     +Q +L+ MY+ C          
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275

Query: 93  ----------------GYFGWGLR-----VFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
                           GY   G+      +FD M E++LV W+ ++S   ++ +    L+
Sbjct: 276 DQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQ 335

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           ++ +M+    +P++  + SV+  C ++GA      IH +A K    +   +  ++++ YA
Sbjct: 336 LFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYA 395

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G++  A  VF ++   +V  W++MI  +A  G    A+ +   M  + I  +  TFI 
Sbjct: 396 KCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIG 455

Query: 252 ALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-D 309
            L  CS     + G++    +I    +         ++D+Y +++ +  A ++ E M   
Sbjct: 456 VLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFP 515

Query: 310 KDVISWNTLFGG 321
            +VI W +L   
Sbjct: 516 PNVIIWGSLMSA 527


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 198/753 (26%), Positives = 331/753 (43%), Gaps = 103/753 (13%)

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF 141
           Q+  I    + G       VFD M  R++++W  ++ A   NG  D G  +  D  + G 
Sbjct: 36  QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSL-ADAISGG- 93

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF---------YAK 192
                  G+++             S +  A ++R  +  F G  V N          Y +
Sbjct: 94  ---NLRTGTIL------------LSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQ 138

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS----------------- 235
            GD+  A ++F ++ S DV  WN M+ GY H     EA N+                   
Sbjct: 139 NGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGY 198

Query: 236 --------------SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
                         +ML EG+T ++   ++ L     +    I   IH L+ ++  E  +
Sbjct: 199 VLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDV 258

Query: 282 SIVNALIDMYIKSSGM-DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            +  A+++ Y K   M D A K FE MA ++  +W+T+    S+        +++ +  L
Sbjct: 259 VVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPL 318

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS--SLIYMFCRCGAV 398
             S P+  +    L + G++ D  +             + E NV S  ++I  + +   V
Sbjct: 319 K-SVPSRTSMLTGLARYGRIDDAKILFDQ---------IHEPNVVSWNAMITGYMQNEMV 368

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           + A  +F+ + ++N  +W  +++GY  N      L +   +   G+  +  +       C
Sbjct: 369 DEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFAC 428

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL------------------- 499
              E  +   Q+H   +K G     Y+C++LI  Y  +  +                   
Sbjct: 429 SNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYN 488

Query: 500 ------------DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
                       D + +  N     D+ SW  ++SA       +EAV IF S++   E P
Sbjct: 489 SFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELP 548

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +  IL  +L     +GA Q  + IH   IKLG ++ + VA+A++  Y KC      ++ F
Sbjct: 549 NPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKV-F 607

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
           D S    D+  +NT+I  YA HGL  EA+ ++  M  A + P++ TFV ++ ACSH GLV
Sbjct: 608 D-SMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLV 666

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D+G   FKSM S YG+ P  + Y C+VD+L R G ++ A+H I  MP +P   ++ +LL 
Sbjct: 667 DEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLG 726

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C+IH N E+G  A+EKL  + P N   +V+LS
Sbjct: 727 ACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLS 759



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 138/657 (21%), Positives = 268/657 (40%), Gaps = 64/657 (9%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           + D+   N ++  Y           +F+ M ERN VSWT+++S  +   +      M+  
Sbjct: 154 SRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRT 213

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK-LG 194
           M   G  P +  + SV+     +G      SIH    K   E++  VG ++LN Y K + 
Sbjct: 214 MLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVN 273

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            + +A + F  +++ +   W+ +I   +  G   +A  V      + +   + + +  L 
Sbjct: 274 MLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVP-SRTSMLTGLA 332

Query: 255 GCSLVADFDI-GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
               + D  I   QIH        E ++   NA+I  Y+++  +D A  +F RM  ++ I
Sbjct: 333 RYGRIDDAKILFDQIH--------EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTI 384

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW  +  G++ N    Q           G  P+  + +     C  +  L+ G Q+  LA
Sbjct: 385 SWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLA 444

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  G      V ++LI ++ +  ++     +FD ++ K+  ++N  +S    N    +  
Sbjct: 445 VKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEAR 504

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSEN------------------------------ 463
             F N+    V     ++  ++  C +++                               
Sbjct: 505 DVFNNMPSPDV----VSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLS 560

Query: 464 -----QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                 Q+  QIH   IK G  S   + ++L+  Y      D+   F +  ER D+ +W 
Sbjct: 561 GNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLKVFDSMEER-DIFTWN 619

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----AYQRTKSIHPF 574
            +++     G   EA+ ++  +V AG  P+E     +L++C+  G     +Q  KS+   
Sbjct: 620 TIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSS- 678

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGAR-MAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
               G    +   + ++D   + GD++GA    +D      D ++++ L+ A   H  V 
Sbjct: 679 --DYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEP-DSVIWSALLGACKIHKNVE 735

Query: 634 EAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
                 +  KL +++PS A  +V + +  S +G+ D+   + K M  + G+   P C
Sbjct: 736 IGRRAAE--KLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM-KERGVNKDPGC 789



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/448 (22%), Positives = 189/448 (42%), Gaps = 43/448 (9%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-CGYFGWGLRVFDEM 105
           L   LS   +L    +   +H  + K GF  D+ +   ++  Y+K        ++ F+ M
Sbjct: 226 LVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGM 285

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           A RN  +W+ I++A  Q G  D    +Y        +P+        +  +  G + +G 
Sbjct: 286 AARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS-VPS--------RTSMLTGLARYGR 336

Query: 166 SIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
                 L  +I E N     +++  Y +   V  AE +F  +   +   W  MI GYA  
Sbjct: 337 IDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARN 396

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL  + ++  +G+     +  ++   CS +   + G+Q+H L +++  + +  + 
Sbjct: 397 GRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVC 456

Query: 285 NALIDMY-------------------------------IKSSGMDYAFKVFERMADKDVI 313
           NALI +Y                               ++++  D A  VF  M   DV+
Sbjct: 457 NALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVV 516

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW T+    ++     +   +F   +     PN    +ILL   G L    LG Q+  +A
Sbjct: 517 SWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIA 576

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  G      V ++L+ M+ +C + + +  VFD++  ++I TWN +++GY  +    + +
Sbjct: 577 IKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAI 635

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + +  +  +GV  N  TF  ++  C  S
Sbjct: 636 RMYQLMVSAGVLPNEVTFVGLLHACSHS 663



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 141/371 (38%), Gaps = 90/371 (24%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P  L   L LS NL +  LG Q+H   +KLG  + + + N L++MY KC      L+VF
Sbjct: 549 NPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVF 607

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M ER++ +W  I++   Q+G     ++MY  M + G +PNE     ++  C   G  +
Sbjct: 608 DSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVD 667

Query: 163 FGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNA 216
            G+         + L   +E      C V +   + GDV  AE   Y +    D   W+A
Sbjct: 668 EGHQFFKSMSSDYGLTPLLEH---YACMV-DLLGRAGDVQGAEHFIYDMPIEPDSVIWSA 723

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++G                                    C +  + +IGR+       +E
Sbjct: 724 LLG-----------------------------------ACKIHKNVEIGRRA------AE 742

Query: 277 VECSISIVNA-----LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-- 329
              SI   NA     L ++Y      D   KV + M ++ V            NK+PG  
Sbjct: 743 KLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGV------------NKDPGCS 790

Query: 330 --QTASLFHKFILSGSRPNHVT--------FSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             Q  +  H F+        +            LL+  G + D D  L           +
Sbjct: 791 WMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLH---------DI 841

Query: 380 DEENVTSSLIY 390
           DEE   SSL+Y
Sbjct: 842 DEEQKESSLLY 852


>gi|297810965|ref|XP_002873366.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319203|gb|EFH49625.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 832

 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 188/742 (25%), Positives = 343/742 (46%), Gaps = 65/742 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AI 121
           G  +HG + KLG      +  +++ MY+KC       ++F +M   + V W ++++  ++
Sbjct: 40  GRALHGCVFKLGHIACTEVSKSVLNMYAKCRRMDDCQKMFRQMDSVDPVVWNIVLTGLSV 99

Query: 122 QNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             G   M  + +  M   +   P+      ++ VCV +G S  G S+H + +K  +EK+ 
Sbjct: 100 SCGRETM--RFFKAMHFADEPKPSSVTFAILLPVCVRLGDSYNGKSMHSYIIKTGLEKDT 157

Query: 181 FVGCSVLNFYAKLGDVAA-AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            VG ++++ YAK G +   A   F  I+  DV  WNA+I G++      +A      ML 
Sbjct: 158 LVGNALVSMYAKFGYIIPDAFTAFDDIADKDVVSWNAIIAGFSENKMMADAFRSFCLMLK 217

Query: 240 EGITMDKYTFINALQGCSLVAD---FDIGRQIHGLII-RSEVECSISIVNALIDMYIKSS 295
           E    +  T  N L  C+ +     +  GRQIH  ++ RS ++  + + N+L+  Y++  
Sbjct: 218 EPTEPNYATIANVLPVCASMGKNIAYRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVG 277

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILL 354
            ++ A  +F RM  KD++SWN +  G++ N    +   LFH  +  G    + VT   +L
Sbjct: 278 RIEEAASLFTRMGSKDLVSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTILSIL 337

Query: 355 RQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
             C +L DL  G ++    L H   L++ +V ++LI  + R G    A+  F  +S K+I
Sbjct: 338 PVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDI 397

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +L  +  +      L    +++   + ++  T   +++ C   +    V ++HG 
Sbjct: 398 ISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGY 457

Query: 474 IIKTG-----------------FSSCGYI------------------CSSLIKSYVNFGQ 498
            +K G                 ++ CG +                   +SL+  YVN G 
Sbjct: 458 SVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGS 517

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
            D++    +     D+ +W  M+         +EA+ +F  +   G +P+   +  +L  
Sbjct: 518 HDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNLLPV 577

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA + +    +  H ++I+ G   ++ +   ++D YAKCG +K A   F QS    D+++
Sbjct: 578 CAQLASLHLVRQCHGYIIR-GRLGDIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLVM 635

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +  ++  YA HG   EA+ IF  M  +N++P             H GL      ++ S+ 
Sbjct: 636 FTAMVAGYAVHGRGKEALMIFSHMIDSNIKPD------------HDGL-----QIYDSIR 678

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           + +GM+P+ + Y C VD+L+R G L+DA   I  MP +P+  ++ +LL  C  +   +LG
Sbjct: 679 AVHGMKPTMEQYACAVDLLARGGRLDDAYSFITQMPVEPNANIWGTLLRACTTYNRMDLG 738

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
              +  LL         HVL+S
Sbjct: 739 HSVANHLLQAESDETGNHVLIS 760



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 213/432 (49%), Gaps = 40/432 (9%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           S+ +N+  R  G Q+H ++V+  +    +F+ N+L++ Y + G       +F  M  ++L
Sbjct: 236 SMGKNIAYRS-GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDL 294

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHC 169
           VSW ++++    N E+   L+++ ++   G +  +   + S++ VC  +     G  IH 
Sbjct: 295 VSWNVVIAGYASNHEWLKALQLFHNLVQKGDVSLDPVTILSILPVCAQLTDLTCGKEIHS 354

Query: 170 FALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           + L+   + ++  VG ++++FYA+ GD +AA   F  +S  D+  WNA++  +A     F
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSMKDIISWNAILDAFADSPKQF 414

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV---ECSISIVN 285
           + LN++  +  E IT+D  T ++ L+ C+ V      +++HG  +++ +   E    + N
Sbjct: 415 QFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLGN 474

Query: 286 ALIDMYIKSSGMDYAFKVFE--------------------------------RMADKDVI 313
           AL+D Y K   ++YA K+F+                                 M+  D+ 
Sbjct: 475 ALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSLLSGYVNSGSHDDAQMLFSEMSTTDLT 534

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +W+ +   ++E+  P +   +F +    G RPN VT   LL  C +L  L L  Q     
Sbjct: 535 TWSLMVRIYAESCFPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI 594

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +  G L +  +  +L+ ++ +CG+++ A+SVF + + +++  +  +++GY  +    + L
Sbjct: 595 IR-GRLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653

Query: 434 KTFCNIWESGVE 445
             F ++ +S ++
Sbjct: 654 MIFSHMIDSNIK 665



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 238/511 (46%), Gaps = 32/511 (6%)

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSG 296
           L  G   D   F++ ++ C+ V++   GR +HG + +   + C+  +  ++++MY K   
Sbjct: 13  LLSGFGTDHRVFLDVVKACASVSELTSGRALHGCVFKLGHIACT-EVSKSVLNMYAKCRR 71

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILL 354
           MD   K+F +M   D + WN +  G S   + G+    F K +      +P+ VTF+ILL
Sbjct: 72  MDDCQKMFRQMDSVDPVVWNIVLTGLS--VSCGRETMRFFKAMHFADEPKPSSVTFAILL 129

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG-AVEMAHSVFDNVSYKNI 413
             C +L D   G  +    +  G   +  V ++L+ M+ + G  +  A + FD+++ K++
Sbjct: 130 PVCVRLGDSYNGKSMHSYIIKTGLEKDTLVGNALVSMYAKFGYIIPDAFTAFDDIADKDV 189

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC---RSENQQMVGQI 470
            +WN +++G+  N   AD  ++FC + +   E N  T   V+  C    ++   +   QI
Sbjct: 190 VSWNAIIAGFSENKMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMGKNIAYRSGRQI 249

Query: 471 HGAII-KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           H  ++ ++   +  ++C+SL+  Y+  G+++ +          D+ SW  +++       
Sbjct: 250 HSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNHE 309

Query: 530 NHEAVTIFHSLVEAGEKP-DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVA 587
             +A+ +FH+LV+ G+   D   + +IL  CA +      K IH ++++  +  E   V 
Sbjct: 310 WLKALQLFHNLVQKGDVSLDPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVG 369

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           +A+I  YA+ GD   A  AF    +  D+I +N ++ A+A      + + +   +    +
Sbjct: 370 NALISFYARFGDTSAAYWAFSL-MSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAI 428

Query: 648 QPSQATFVSVMSACSH----------KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
                T +S++  C++           G   K  LL    + + G          L+D  
Sbjct: 429 TLDSVTILSLLKFCTNVQGIGKVKEVHGYSVKAGLLHNEEEPKLG--------NALLDAY 480

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           ++ G +E A  + + +  + +   Y SLLSG
Sbjct: 481 AKCGNVEYAHKIFQGLSERRTLVTYNSLLSG 511



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 150/341 (43%), Gaps = 37/341 (10%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRV 101
           DP+ +   L +   L     G ++H +I++  +   D  + N LI+ Y++ G        
Sbjct: 329 DPVTILSILPVCAQLTDLTCGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F  M+ ++++SW  I+ A   + +    L +   +       +   + S++K C ++   
Sbjct: 389 FSLMSMKDIISWNAILDAFADSPKQFQFLNLLHHLFNEAITLDSVTILSLLKFCTNVQGI 448

Query: 162 EFGYSIHCFALK---IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI------------ 206
                +H +++K   +  E+ P +G ++L+ YAK G+V  A ++F  +            
Sbjct: 449 GKVKEVHGYSVKAGLLHNEEEPKLGNALLDAYAKCGNVEYAHKIFQGLSERRTLVTYNSL 508

Query: 207 --------------------SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
                               S+ D+  W+ M+  YA   +  EA+ V   +   G+  + 
Sbjct: 509 LSGYVNSGSHDDAQMLFSEMSTTDLTTWSLMVRIYAESCFPNEAIGVFREIQARGMRPNT 568

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            T +N L  C+ +A   + RQ HG IIR  +   I +   L+D+Y K   + +A+ VF+ 
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYIIRGRLG-DIRLKGTLLDVYAKCGSLKHAYSVFQS 627

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
            A +D++ +  +  G++ +    +   +F   I S  +P+H
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIFSHMIDSNIKPDH 668


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 278/517 (53%), Gaps = 13/517 (2%)

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L+ C  V+   +G++IHG +++  ++  + + NAL+ MY + + ++YA  VF++M ++
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV+SW+T+    S NK       L  +      RP+ V    ++       ++ +G    
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGK--- 215

Query: 371 CLALHCGFLDEEN-------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             A+H   +   N        T++L+ M+ +CG + +A  +F+ ++ K + +W  +++G 
Sbjct: 216 --AMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    +  K F  + E  +  N  T   ++  C  +   Q+  Q+H  I++ GFS   
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y     + N+    +  +  D+  W AM+SA        +A  +F  +  +
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +P +  + ++L+ CA  GA    K +H ++ K     +  + +A++D YAKCGDI  A
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F ++  S D+ ++N +I  +A HG   EA++IF +M+   ++P+  TF+ ++ ACSH
Sbjct: 454 GRLFIEAI-SRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV +G  LF+ M   +G+ P  + YGC+VD+L R G L++A  +I+ MP +P+  V+ 
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +L++ CR+H N +LGE A+ +LL + P+N   +VL+S
Sbjct: 573 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 609



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 200/407 (49%), Gaps = 18/407 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG ++HG ++K G   D+F+ N L+ MY +C    +   VFD+M ER++VSW+ ++ +  
Sbjct: 112 LGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLS 171

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N EFDM L++  +M      P+E A+ S++ +         G ++H +   IR   N  
Sbjct: 172 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYV--IRNSNNEH 229

Query: 182 VG----CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +G     ++L+ YAK G +  A ++F  ++   V  W AMI G        E   +   M
Sbjct: 230 MGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRM 289

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             E I  ++ T ++ +  C       +G+Q+H  I+R+    S+++  AL+DMY K S +
Sbjct: 290 QEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDI 349

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A  +F+   ++DV+ W  +   +++     Q  +LF +   SG RP  VT   LL  C
Sbjct: 350 RNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLC 409

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENV------TSSLIYMFCRCGAVEMAHSVFDNVSYK 411
                LDLG  +        ++D+E V       ++L+ M+ +CG +  A  +F     +
Sbjct: 410 AVAGALDLGKWVH------SYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 463

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +I  WN +++G+  +    + L  F  +   GV+ N  TF  ++  C
Sbjct: 464 DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 510



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 185/387 (47%), Gaps = 4/387 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN--LIAMYSKCGYFGW 97
           +R   + +   ++L  +  +  +G  +H ++++      + +     L+ MY+KCG+ G 
Sbjct: 191 VRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGL 250

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             ++F+ + ++ +VSWT +++  I++   + G K+++ M+     PNE  + S++  C  
Sbjct: 251 ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGF 310

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            GA + G  +H + L+     +  +  ++++ Y K  D+  A  +F S  + DV  W AM
Sbjct: 311 TGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAM 370

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +  YA      +A N+   M   G+   K T ++ L  C++    D+G+ +H  I +  V
Sbjct: 371 LSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERV 430

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E    +  AL+DMY K   ++ A ++F     +D+  WN +  GF+ +    +   +F +
Sbjct: 431 EVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAE 490

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-GFLDEENVTSSLIYMFCRCG 396
               G +PN +TF  LL  C     +  G +L    +H  G + +      ++ +  R G
Sbjct: 491 MERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 550

Query: 397 AVEMAHSVFDNVSYK-NITTWNELLSG 422
            ++ AH +  ++  K N   W  L++ 
Sbjct: 551 LLDEAHEMIKSMPIKPNTIVWGALVAA 577



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 204/487 (41%), Gaps = 3/487 (0%)

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS 205
           F   SV+K C  +  ++ G  IH F LK  ++++ FVG +++  Y +   V  A  VF  
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154

Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
           +   DV  W+ MI   +       AL ++  M F  +   +   ++ +   +  A+  +G
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214

Query: 266 RQIHGLIIRSE--VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           + +H  +IR+       +    AL+DMY K   +  A ++F  +  K V+SW  +  G  
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
            +    +   LF +       PN +T   L+ +CG    L LG QL    L  GF     
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           + ++L+ M+ +C  +  A ++FD+   +++  W  +LS Y    C       F  +  SG
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           V     T   ++  C  +    +   +H  I K        + ++L+  Y   G ++ + 
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                A   D+  W A+++     G+  EA+ IF  +   G KP++     +L++C+  G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 564 AYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                K +    V   G   ++     ++D   + G +  A           + IV+  L
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 574

Query: 623 IMAYAHH 629
           + A   H
Sbjct: 575 VAACRLH 581



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 10/189 (5%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R   + +   LSL     +  LG  VH +I K     D  L   L+ MY+KCG    
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-- 155
             R+F E   R++  W  I++    +G  +  L ++ +M+  G  PN+     ++  C  
Sbjct: 453 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 156 ---VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDV 211
              V+ G   F   +H F L  +IE     GC V +   + G +  A  +  S+    + 
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEH---YGCMV-DLLGRAGLLDEAHEMIKSMPIKPNT 568

Query: 212 GCWNAMIGG 220
             W A++  
Sbjct: 569 IVWGALVAA 577


>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 185/666 (27%), Positives = 320/666 (48%), Gaps = 88/666 (13%)

Query: 130 LKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
           ++++V + ++ ++ P+ F + S +  C ++  +  G  +H ++++  ++    VG ++L+
Sbjct: 43  VQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLS 102

Query: 189 FYAKLGDVAAAERVFYSISSDDV--------GC-----------------------WNAM 217
           FYAK  D+ + +RVF  I + DV         C                       WNA+
Sbjct: 103 FYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAI 162

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G A   +   ALN+   M   G+  DKYTF + L  CSL    D GR++H L+I++  
Sbjct: 163 ITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLEL-LDFGREVHTLVIKTGF 221

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADK--DVISWNTLFGGFSENKNPGQTASLF 335
               S++NAL+ MY  S  +  A++VFE       D I++N + GG +      +   +F
Sbjct: 222 LVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMF 281

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +   +  RP  +TF  ++  C       +  Q+   A+  GF     V+++ + M+  C
Sbjct: 282 KEMQEACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSC 338

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +   H VFD +                 N     +L  F  +  +G+E +    F + 
Sbjct: 339 GNLHAVHMVFDRLG----------------NFYRLAIL-AFLQMQRAGIEPDE---FTIG 378

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
                SE+ ++V      + K G +S   + ++L+ ++   GQ++ +++   G E+    
Sbjct: 379 SLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQ---GLEQ---- 431

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
                                F+ L+ +  KP+ Y L  +L+ CA+I A +  K IH ++
Sbjct: 432 ---------------------FYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYI 470

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           ++ G  +   + +A+I  YAKCGD+  +   F+   N  D++ +N +I AYA HG   EA
Sbjct: 471 LRSGVFSVTSLGNALITMYAKCGDLDWSLRIFN-VMNGRDIVSWNAMISAYAQHGKGKEA 529

Query: 636 MEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           +  F  M+    ++P QATF +V+SACSH GLVD G  +F SM + YG +P  D   C+V
Sbjct: 530 VHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIV 589

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+L R GYLE+A+ +I     +   +++ +L S C  HGN  LG   +  LL +   + A
Sbjct: 590 DLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPA 649

Query: 755 AHVLLS 760
            +VLLS
Sbjct: 650 VYVLLS 655



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 151/635 (23%), Positives = 253/635 (39%), Gaps = 91/635 (14%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q  S ++L+ D   L+ +L+   NL+    G Q+H + ++ G      + N L++ Y+K 
Sbjct: 48  QIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKS 107

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF-------------------------- 126
                  RVF+E+   ++ SWT ++SA  + G+                           
Sbjct: 108 KDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCA 167

Query: 127 -----DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
                ++ L ++ +M   G   +++   SV+ +C S+   +FG  +H   +K        
Sbjct: 168 ENKHTEIALNLFREMHQLGVRHDKYTFASVLSLC-SLELLDFGREVHTLVIKTGFLVRAS 226

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           V  ++L  Y   G VA A  VF    S   DD+  +N MIGG A  G   EAL +   M 
Sbjct: 227 VINALLTMYFNSGKVADAYEVFEEAESTVHDDI-TFNVMIGGLASVGRDEEALIMFKEMQ 285

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              +   + TF++ +  CS      +  Q+H   I+   E    + NA + MY     + 
Sbjct: 286 EACLRPTELTFVSVMSSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLH 342

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQC 357
               VF+R+                   N  + A L F +   +G  P+  T   LL   
Sbjct: 343 AVHMVFDRLG------------------NFYRLAILAFLQMQRAGIEPDEFTIGSLLASS 384

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
                L++    Q L    G   +  V+++L+  F + G +E A        Y+ +  + 
Sbjct: 385 E---SLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQA--------YQGLEQFY 433

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           ELL                     S ++ N  T   V+  C      +   QIHG I+++
Sbjct: 434 ELLM--------------------STLKPNAYTLSIVLSICASISALRHGKQIHGYILRS 473

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G  S   + ++LI  Y   G LD S    N     D+ SW AM+SA    G   EAV  F
Sbjct: 474 GVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFF 533

Query: 538 HSLVEAGE-KPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            ++ ++G  KPD+     +L++C+  G     T+  +  V   GF       S ++D   
Sbjct: 534 KAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLG 593

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           + G ++ A    +         ++ TL  A A HG
Sbjct: 594 RAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHG 628



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 56/319 (17%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCG------------------------------- 93
           QVH   +K+GF     + N  + MYS CG                               
Sbjct: 311 QVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLGNFYRLAILAFLQMQRAGI 370

Query: 94  ---YFGWG-----------LRVFDEMAERNLVSWTLIVSAAI-----QNGEFDM---GLK 131
               F  G           +++F  +  +N ++  + VS A+     ++G+ +    GL+
Sbjct: 371 EPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQGLE 430

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
            + ++  +   PN + +  V+ +C S+ A   G  IH + L+  +     +G +++  YA
Sbjct: 431 QFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYA 490

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFI 250
           K GD+  + R+F  ++  D+  WNAMI  YA  G G EA++   +M    G+  D+ TF 
Sbjct: 491 KCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFT 550

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
             L  CS     D G +I   ++     E     ++ ++D+  ++  ++ A ++      
Sbjct: 551 AVLSACSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHL 610

Query: 310 KDVIS-WNTLFGGFSENKN 327
           K V S W TLF   + + N
Sbjct: 611 KIVSSIWWTLFSACAAHGN 629



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 34/240 (14%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+ +   L+  LS+  ++ +   G Q+HG+I++ G  +   L N LI MY+KCG   W
Sbjct: 438 STLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDW 497

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCV 156
            LR+F+ M  R++VSW  ++SA  Q+G+    +  +  M+ + G  P++    +V+  C 
Sbjct: 498 SLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACS 557

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G  + G  I                 S++N Y             +   +D + C   
Sbjct: 558 HAGLVDDGTRIF---------------NSMVNDYG------------FEPGADHLSCIVD 590

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           ++G     GY  EA  +++S   + ++   +T  +A   C+   +  +GR + G ++  E
Sbjct: 591 LLG---RAGYLEEAERLINSKHLKIVSSIWWTLFSA---CAAHGNLRLGRIVAGFLLEIE 644


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 175/575 (30%), Positives = 288/575 (50%), Gaps = 12/575 (2%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +A A +VF  I + D   +NA+I  Y+  G    A+++  SML+  +  +KYTF   L
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + CS +AD   GR IH       +   + +  ALID+YI+ +    A  VF +M  +DV+
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 314 SWNTLFGGFSENKNPGQT-ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +WN +  G++ +       A L       G RPN  T   LL    +   L  G  +   
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 373 ALHCGFLD--EENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
            L   +LD  EE V   ++L+ M+ +C  +  A  VF  ++ +N  TW+ L+ G+    C
Sbjct: 227 CLR-AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVL--C 283

Query: 429 D--ADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           D   +    F ++   G+  ++  +    +  C    + +M  Q+H  + K+G  +    
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SL+  Y   G ++ +    +     D  S+GA++S  V  G   EA  +F  +     
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +PD   + +++ +C+ + A Q  +  H  VI  G   E  + +++ID YAKCG I  +R 
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+   + D++ +NT+I  Y  HGL  EA  +F  MK    +P   TF+ +++ACSH G
Sbjct: 464 VFDK-MPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSG 522

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV +G   F +M  +YG+ P  + Y C+VD+L+R G+L++A   I+ MP +    V+ +L
Sbjct: 523 LVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGAL 582

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  CRIH N +LG+  S  +  L P+     VLLS
Sbjct: 583 LGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLS 617



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 234/474 (49%), Gaps = 19/474 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H H   +G   D+F+   LI +Y +C  FG    VF +M  R++V+W  +++    
Sbjct: 118 GRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYAN 177

Query: 123 NGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP- 180
           +G +   +   +DM+   G  PN   + S++ +    GA   G S+H + L+  +++N  
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEE 237

Query: 181 --FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
              +G ++L+ YAK   +  A RVF+ ++  +   W+A+IGG+  C    EA N+   ML
Sbjct: 238 QVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDML 297

Query: 239 FEGITMDKYTFI-NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
            EG+     T + +AL+ C+ +AD  +G Q+H L+ +S +   ++  N+L+ MY K+  +
Sbjct: 298 VEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLI 357

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  +F+ +A KD IS+  L  G+ +N    +   +F K      +P+  T   L+  C
Sbjct: 358 NEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPAC 417

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L  G       +  G   E ++ +SLI M+ +CG ++++  VFD +  ++I +WN
Sbjct: 418 SHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWN 477

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI--- 470
            +++GY  +    +    F ++   G E +  TF  ++  C  S    E +     +   
Sbjct: 478 TMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHK 537

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           +G + +       YIC  ++      G LD +++F      + D+  WGA++ A
Sbjct: 538 YGILPRMEH----YIC--MVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGA 585



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 145/604 (24%), Positives = 254/604 (42%), Gaps = 10/604 (1%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G      +VFD +   +  ++  ++ A    G F   + +Y  M      PN++    V+
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++     G +IH  A  + +  + FV  ++++ Y +      A  VF  +   DV 
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            WNAM+ GYA+ G    A+  +  M    G+  +  T ++ L   +       G  +H  
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 272 IIRS---EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
            +R+   + E  + I  AL+DMY K   + YA +VF  M  ++ ++W+ L GGF      
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 329 GQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            +  +LF   ++ G    +  + +  LR C  L DL +G QL  L    G   +    +S
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ + G +  A  +FD ++ K+  ++  LLSGY  N    +    F  +    V+ +
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C      Q     HG++I  G +    IC+SLI  Y   G++D S +  +
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
                D+ SW  M++     G   EA T+F S+   G +PD+     ++ +C+  G    
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526

Query: 568 TKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
            K        K G    +     ++D  A+ G +  A           DV V+  L+ A 
Sbjct: 527 GKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGAC 586

Query: 627 AHHGLVSEAMEIFDKMKLANLQPS-QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
             H  +    ++     +  L P     FV + +  S  G  D+   + + +    G + 
Sbjct: 587 RIHKNIDLGKQV--SRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV-RIIQKVKGFKK 643

Query: 686 SPDC 689
           SP C
Sbjct: 644 SPGC 647



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 172/391 (43%), Gaps = 7/391 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND---IFLQNNLIAMYSKCGYFG 96
           LR +   L   L L     +   GT VH + ++     +   + +   L+ MY+KC +  
Sbjct: 197 LRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLV 256

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVC 155
           +  RVF  M  RN V+W+ ++   +          ++ DM   G    +  +V S ++VC
Sbjct: 257 YACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVC 316

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S+     G  +H    K  I  +   G S+L+ YAK G +  A  +F  I+  D   + 
Sbjct: 317 ASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYG 376

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           A++ GY   G   EA  V   M    +  D  T ++ +  CS +A    GR  HG +I  
Sbjct: 377 ALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR 436

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +    SI N+LIDMY K   +D + +VF++M  +D++SWNT+  G+  +    +  +LF
Sbjct: 437 GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLF 496

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
                 G  P+ VTF  L+  C     +  G      +    G L        ++ +  R
Sbjct: 497 LSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 556

Query: 395 CGAVEMAHSVFDNVSYK-NITTWNELLSGYC 424
            G ++ A+    ++  K ++  W  LL G C
Sbjct: 557 GGFLDEAYQFIQSMPLKADVRVWGALL-GAC 586


>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
 gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
          Length = 526

 Score =  275 bits (702), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 238/476 (50%), Gaps = 36/476 (7%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+LIDMY K   MD A KVFE +    ++SWN L  GF +  +  +   +      +G  
Sbjct: 12  NSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFE 71

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN VT+S LL  C K  D                                   V  A ++
Sbjct: 72  PNEVTYSNLLASCIKARD-----------------------------------VHSARAM 96

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           FD +S  ++TTWN LLSGYC      D ++ F  +    V+ +  T   ++ +C +    
Sbjct: 97  FDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGIL 156

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
               Q+H A ++    +  ++ S L+  Y   GQ+  +    N     D+  W +++S L
Sbjct: 157 DFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGL 216

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                N EA   F  + E G  P E    +++NSC+ + +    + IH  V+K G++  V
Sbjct: 217 TIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNV 276

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           YV SA+ID YAKCG++  AR+ FD     N ++ +N +I  YA +GL  +A+E+F+ M  
Sbjct: 277 YVGSALIDMYAKCGNMDDARLFFDTMMMKN-IVAWNEMIHGYAQNGLGDKAVELFEYMLT 335

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
              +P   TF++V++ CSH GLVDK    F SM++ YG+ P  + Y CL+D L R G   
Sbjct: 336 TEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFV 395

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + + +I  MP +  P ++  LL+ C +H N ELG+ A+E L  + PKN + +VLLS
Sbjct: 396 EVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLS 451



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 172/390 (44%), Gaps = 35/390 (8%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           + GF +D  + N+LI MY+KC      ++VF+ +    +VSW ++++   Q G     ++
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           +   M+  GF PNE    +++  C+                                   
Sbjct: 61  VLSLMQEAGFEPNEVTYSNLLASCI----------------------------------- 85

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K  DV +A  +F  IS   V  WN ++ GY       + + +   M  + +  D+ T   
Sbjct: 86  KARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAV 145

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  CS +   D GRQ+H   +R  +   + + + L+DMY K   +  A  +F +M ++D
Sbjct: 146 ILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERD 205

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V+ WN++  G + +    +    F +   +G  P   +++ ++  C +L  +  G Q+  
Sbjct: 206 VVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHA 265

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +  G+     V S+LI M+ +CG ++ A   FD +  KNI  WNE++ GY  N     
Sbjct: 266 QVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDK 325

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            ++ F  +  +  + +  TF  V+  C  S
Sbjct: 326 AVELFEYMLTTEQKPDAVTFIAVLTGCSHS 355



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/450 (22%), Positives = 196/450 (43%), Gaps = 37/450 (8%)

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG S+++ Y K  ++  A +VF S+ S  +  WN +I G+   G   +A+ V+S M   G
Sbjct: 10  VGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAG 69

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              ++ T+ N L  C                                   IK+  +  A 
Sbjct: 70  FEPNEVTYSNLLASC-----------------------------------IKARDVHSAR 94

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F++++   V +WNTL  G+ + +    T  LF +      +P+  T +++L  C KL 
Sbjct: 95  AMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLG 154

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            LD G Q+   ++     ++  V S L+ M+ +CG + +A S+F+ ++ +++  WN ++S
Sbjct: 155 ILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIIS 214

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G   +  + +    F  + E+G+     ++  ++ +C R  +     QIH  ++K G+  
Sbjct: 215 GLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQ 274

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+ S+LI  Y   G +D++  F +     ++ +W  M+      G   +AV +F  ++
Sbjct: 275 NVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYML 334

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              +KPD      +L  C+  G   +  +  +      G        + +IDA  + G  
Sbjct: 335 TTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRF 394

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMA-YAHH 629
                   +    +D I++  L+ A   HH
Sbjct: 395 VEVEALIHKMPCKDDPIIWEVLLAACVVHH 424



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 109/218 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L     G QVH   V+    ND+F+ + L+ MYSKCG  G   
Sbjct: 136 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 195

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F++M ER++V W  I+S    +         +  M+ NG MP E +  S++  C  + 
Sbjct: 196 SIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLS 255

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  IH   +K   ++N +VG ++++ YAK G++  A   F ++   ++  WN MI 
Sbjct: 256 SIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIH 315

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GYA  G G +A+ +   ML      D  TFI  L GCS
Sbjct: 316 GYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 353



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/344 (22%), Positives = 158/344 (45%), Gaps = 51/344 (14%)

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +++V +SLI M+ +C  ++ A  VF+++    I +WN L++G+      A  ++  
Sbjct: 3   GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVL 62

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             + E+G E N  T+  ++ +C ++ +      +H A  +  F                 
Sbjct: 63  SLMQEAGFEPNEVTYSNLLASCIKARD------VHSA--RAMF----------------- 97

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
                     +   R  + +W  ++S    +  + + + +F  +     +PD   L  IL
Sbjct: 98  ----------DKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 147

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           +SC+ +G     + +H   ++   + +++VAS ++D Y+KCG I  AR  F++     DV
Sbjct: 148 SSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNK-MTERDV 206

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N++I     H L  EA + F +M+   + P+++++ S++++CS    +  G      
Sbjct: 207 VCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHG------ 260

Query: 677 MDSQYGMQPSPDCY-------GCLVDMLSRNGYLEDAKHVIEIM 713
              Q   Q   D Y         L+DM ++ G ++DA+   + M
Sbjct: 261 --RQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTM 302



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 39/262 (14%)

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + GF S  ++ +SLI  Y    ++D + +       + + SW  +++    +G   +AV 
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +   + EAG +P+E     +L SC                                    
Sbjct: 61  VLSLMQEAGFEPNEVTYSNLLASC-----------------------------------I 85

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           K  D+  AR  FD+  +   V  +NTL+  Y       + +E+F +M+  N+QP + T  
Sbjct: 86  KARDVHSARAMFDK-ISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 144

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            ++S+CS  G++D G  +  S   ++ +         LVDM S+ G +  A+ +   M  
Sbjct: 145 VILSSCSKLGILDFGRQV-HSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT- 202

Query: 716 QPSPTVYRSLLSGCRIHG-NKE 736
           +     + S++SG  IH  NKE
Sbjct: 203 ERDVVCWNSIISGLTIHSLNKE 224



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 19/185 (10%)

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           + GF ++ +V +++ID Y KC ++  A   F +S  S  ++ +N LI  +   G  ++A+
Sbjct: 1   RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVF-ESLPSVTIVSWNILITGFGQEGSCAKAV 59

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E+   M+ A  +P++ T+ +++++C     V     +F  +      +PS   +  L+  
Sbjct: 60  EVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKIS-----RPSVTTWNTLL-- 112

Query: 697 LSRNGYLEDAKHVIEIMPF--------QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
              +GY ++ +H   I  F        QP  T    +LS C   G  + G       +  
Sbjct: 113 ---SGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF 169

Query: 749 LPKND 753
           L  ND
Sbjct: 170 LLHND 174



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S   G Q+H  ++K G+  ++++ + LI MY+KCG        FD M  +N+V+W  +
Sbjct: 254 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 313

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +    QNG  D  ++++  M T    P+     +V+  C   G
Sbjct: 314 IHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 356


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 163/577 (28%), Positives = 283/577 (49%), Gaps = 30/577 (5%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  YA  G +  A ++FY         W+++I GY   G   EAL +   M +EG   
Sbjct: 77  TMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERP 136

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T+ + L+ CS+    + G+QIH   I+++ + +  +V  L+DMY K   +  A  +F
Sbjct: 137 NQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLF 196

Query: 305 ERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           E   DK + + W  +  G+S+N +  +    F      G   N  TF  +L  CG +   
Sbjct: 197 ELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISAC 256

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G Q+    +  GF     V S+L+ M+ +CG +  A  + + +   +  +WN ++ G 
Sbjct: 257 GFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGC 316

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + L  F  +    ++++  T+  V+       + +    +H  I+KTGF +  
Sbjct: 317 VRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYK 376

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y   G  D +F+        D+ SW ++++  VH G   EA+ +F  +   
Sbjct: 377 LVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 436

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD+ ++  +L++CA +   +  K +H   +K G  + + V ++++  YAKCG I+ A
Sbjct: 437 GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDA 496

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD S    DVI +  LI+ YA +G   +                            H
Sbjct: 497 NKVFD-SMEIQDVITWTALIVGYAQNGRGRD----------------------------H 527

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV+ G   F+SM+  YG++P P+ Y C++D+L R+G L +AK ++  M  QP  TV++
Sbjct: 528 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 587

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL+ CR+HGN ELGE A+  L  L PKN   +VLLS
Sbjct: 588 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLS 624



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 196/365 (53%), Gaps = 1/365 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RNLVSWTLIVSAAI 121
           G Q+H H +K  F ++ F+   L+ MY+KC        +F+   + RN V WT +V+   
Sbjct: 157 GKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYS 216

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG+    ++ + DM+  G   N+F   S++  C S+ A  FG  +H   ++     N F
Sbjct: 217 QNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVF 276

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ Y+K GD++ A R+  ++  DD   WN+MI G    G G EAL++   M    
Sbjct: 277 VGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRH 336

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D++T+ + L   S V D      +H LI+++  E    + NAL+DMY K    DYAF
Sbjct: 337 MKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAF 396

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VFE+M DKDVISW +L  G   N +  +   LF +  + G  P+ +  + +L  C +L 
Sbjct: 397 DVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELT 456

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G Q+    L  G     +V +SL+ M+ +CG +E A+ VFD++  +++ TW  L+ 
Sbjct: 457 VLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIV 516

Query: 422 GYCFN 426
           GY  N
Sbjct: 517 GYAQN 521



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/594 (24%), Positives = 270/594 (45%), Gaps = 16/594 (2%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +I  Y+  G      ++F E   R+ ++W+ ++S   + G     L+++ +M+  G  
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           PN+F  GSV++VC      E G  IH  A+K + + N FV   +++ YAK   +  AE +
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 203 FYSISSDDVG--CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           F  ++ D      W AM+ GY+  G G +A+     M  EGI  +++TF + L  C  ++
Sbjct: 196 F-ELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSIS 254

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
               G Q+HG I+RS    ++ + +AL+DMY K   +  A ++ E M   D +SWN++  
Sbjct: 255 ACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIV 314

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G        +  SLF    L   + +  T+  +L     ++D+   + +  L +  GF  
Sbjct: 315 GCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEA 374

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
            + V ++L+ M+ + G  + A  VF+ ++ K++ +W  L++G   N    + L+ FC + 
Sbjct: 375 YKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMR 434

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G+  +      V+  C      +   Q+H   +K+G  S   + +SL+  Y   G ++
Sbjct: 435 IMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIE 494

Query: 501 NSFEFSNGAERLDMASWGAMMSALVH--QGHNHEAV-----TIFHSLVEA-GEKPDEYIL 552
           ++ +  +  E  D+ +W A++       +G +H  +     + F S+ E  G KP     
Sbjct: 495 DANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHY 554

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF- 611
             +++     G     K +   + ++    +  V  A++ A    G+++    A +  F 
Sbjct: 555 ACMIDLLGRSGKLMEAKEL---LNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFE 611

Query: 612 -NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
               + + Y  L   Y+  G   EA +    MKL  +          MS+  H+
Sbjct: 612 LEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHR 665



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 188/425 (44%), Gaps = 35/425 (8%)

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R N   ++   + C +L   +L   ++     CG +   + ++ ++    +CG V+ A  
Sbjct: 3   RLNLGIYTFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARK 62

Query: 404 VFD-------------------------------NVSYKNITTWNELLSGYCFNCCDADV 432
           +FD                                   ++  TW+ L+SGYC   CD + 
Sbjct: 63  LFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEA 122

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L+ F  +   G   N  T+  V+  C      +   QIH   IKT F S  ++ + L+  
Sbjct: 123 LELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDM 182

Query: 493 YVNFG-QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
           Y      L+  + F    ++ +   W AM++     G  H+A+  F  +   G + +++ 
Sbjct: 183 YAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFT 242

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
             +IL +C +I A      +H  +++ GF   V+V SA++D Y+KCGD+  AR    ++ 
Sbjct: 243 FPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRML-ETM 301

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
             +D + +N++I+     GL  EA+ +F  M L +++  + T+ SV++ C    +  +  
Sbjct: 302 EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLN-CFSFVMDMRNA 360

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           +   S+  + G +        LVDM ++ GY + A  V E M        + SL++GC  
Sbjct: 361 MSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCVH 419

Query: 732 HGNKE 736
           +G+ E
Sbjct: 420 NGSYE 424



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 96/169 (56%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH  IVK GF     + N L+ MY+K GYF +   VF++M +++++SWT +V+  + NG 
Sbjct: 363 VHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGS 422

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           ++  L+++ +M+  G  P++  + +V+  C  +   EFG  +H   LK  +  +  V  S
Sbjct: 423 YEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNS 482

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           +++ YAK G +  A +VF S+   DV  W A+I GYA  G G +   +V
Sbjct: 483 LVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLV 531



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 47/86 (54%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I +A  LS    L     G QVH + +K G  + + + N+L++MY+KCG      
Sbjct: 438 IHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDAN 497

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGE 125
           +VFD M  +++++WT ++    QNG 
Sbjct: 498 KVFDSMEIQDVITWTALIVGYAQNGR 523


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 293/589 (49%), Gaps = 6/589 (1%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            +   +   +++ YA+LG+   A  V   +   +   WNA I G    G   EAL    +
Sbjct: 72  RRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWA 131

Query: 237 MLFEG-ITMDKYTFINALQGCSLVADFDIGR----QIHGLIIRSEVECSISIVNALIDMY 291
           M+ +G +  D +T+   ++ C+ +   + GR     +   ++R  V  S+ +  AL+DM+
Sbjct: 132 MVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMF 191

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A  VFE M ++D+ +W  + GG     +     SLF +    G   + V  +
Sbjct: 192 AKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIA 251

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            ++  CG+  +L  G+ L   A+ CG  D+  V+++L+ M+C+CG + MA  VF ++ +K
Sbjct: 252 TVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFK 311

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +W+ L++GY  N  D   +  F  +  +G++ N  T   ++ +    +  +   +IH
Sbjct: 312 DVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIH 371

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G  ++ GF    ++ S+ I  Y   G +  +        + D+  W +M++     G+  
Sbjct: 372 GFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTD 431

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            A+  F +L + G +PD   + ++L  C       + K +H +V++   ++   V++A+I
Sbjct: 432 SALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALI 491

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KC  ++  +  F Q     D   YNTLI ++  HG   EA+ +FD MK   + P +
Sbjct: 492 DMYCKCCCLEKGKEIF-QLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDK 550

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TFV+++S+CSH GL++KG   +  M   Y + P  + Y C+VD+ SR+G L+DA   + 
Sbjct: 551 VTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVS 610

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +  +    V   LL  CR+H   ++ E  ++++    P +   H+LLS
Sbjct: 611 SLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLS 659



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 244/531 (45%), Gaps = 10/531 (1%)

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L   L+  Y++ G  G  L V D M  RN  +W   +   + +G+F   L+ Y  M  +G
Sbjct: 77  LAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDG 136

Query: 141 FMPNE-FAVGSVMKVCVSMGASEFGY----SIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
            +  + F    V+K C ++G  E G     ++    ++  +  + FV C++++ +AK G 
Sbjct: 137 SVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGC 196

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +  A  VF S+   D+  W AMIGG  H G   +A+++ S M  EG   D       +  
Sbjct: 197 LGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPA 256

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C    +   G  +HG  +R  V     + NAL+DMY K   +  A +VF  +  KDV+SW
Sbjct: 257 CGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSW 316

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           +TL  G+S+N     + +LF + + +G +PN  T + +L    ++     G ++   +L 
Sbjct: 317 STLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLR 376

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            GF   + + S+ I  + R G++  A  V + +  +++  WN +++GY  N      L  
Sbjct: 377 NGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCA 436

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  + + G   +  T   V+  C          ++H  +++   SS   + ++LI  Y  
Sbjct: 437 FRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCK 496

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
              L+   E        D A++  ++S+    GH  EA+ +F  +   G  PD+     +
Sbjct: 497 CCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVAL 556

Query: 556 LNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDAYAKCGDIKGA 603
           L+SC+  G  ++    +  +++   +    E Y  S V+D Y++ G +  A
Sbjct: 557 LSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHY--SCVVDLYSRSGKLDDA 605



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 230/478 (48%), Gaps = 7/478 (1%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           +    +D F     I    +L + E  + R++   V   +V+      +F+Q  L+ M++
Sbjct: 135 DGSVAADGFTYPPVIKACAALGVVE--QGRMVRENVEADVVRGVVAPSVFVQCALVDMFA 192

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG  G    VF+ M ER+L +WT ++  A+  G++   + ++  M++ GF+ +   + +
Sbjct: 193 KCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIAT 252

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V+  C        G  +H  A++  +  +  V  ++++ Y K G +  A+RVF+SI   D
Sbjct: 253 VIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKD 312

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W+ +I GY+  G    ++N+ + M+  G+  +  T  + L   S +  F  G++IHG
Sbjct: 313 VVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHG 372

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             +R+  + S  + +A ID Y +   +  A  V E M  +D++ WN++  G++ N N   
Sbjct: 373 FSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDS 432

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F      G RP+HVT   +L  C     L  G +L    +        +V+++LI 
Sbjct: 433 ALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALID 492

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+C+C  +E    +F  V+ ++  T+N L+S +  +  + + +  F  +   G+  +  T
Sbjct: 493 MYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVT 552

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG---YICSSLIKSYVNFGQLDNSFEF 505
           F  ++ +C  +   +     +  +++    S G   Y C  ++  Y   G+LD++++F
Sbjct: 553 FVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSC--VVDLYSRSGKLDDAWKF 608


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 173/582 (29%), Positives = 297/582 (51%), Gaps = 12/582 (2%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           V+  Y K G V  A  VF SI   +V  W  ++  YA  G+    L ++  M   G+  +
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS----IVNALIDMYIKSSGMDYAF 301
             T    +   S + ++D  R+IH    R+   C ++    +V ALIDMY K   + +A 
Sbjct: 182 AVTLATVIGAVSELGNWDEARKIHA---RAAATCQLTYDVVLVTALIDMYAKCGDIFHAE 238

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG-KL 360
            VF++  +KD+   N +   + +        S F++   SG +PN VT+++L R C    
Sbjct: 239 VVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNG 298

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           +  D  +   C  L      +  V ++L+ M+ RCG++E A  VFD +  KN+ TWN ++
Sbjct: 299 VYSDARVAHMCFIL-SKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMI 357

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY       + L+ + ++  +GVE +  TF  V+E+C  +E+      IH  ++  G+ 
Sbjct: 358 AGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYD 417

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNG-AERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           S   + S+LI  Y   G L ++ + F  G      + SW AM++AL   G    A+ +F 
Sbjct: 418 SSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFR 477

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G + +     + +++C++IGA     +I   VI  G   +V + +++I+ Y KCG
Sbjct: 478 KMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCG 537

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A   F    +  +++ +NT++ A + +G  + + E+  +M L   QP++ T ++++
Sbjct: 538 RLDYALEVF-HYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNML 596

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
             CSH GLV K    F+SM   + + P+ + YGCLVD+L R+G LE+ +  I   PF   
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ SLL  C IH + E G  A+ ++L L PKN + +VLLS
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLS 698



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 220/499 (44%), Gaps = 3/499 (0%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F  D  L N ++  Y KCG       VF  +   N+ SWT++++A  QNG     L++  
Sbjct: 112 FAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLR 171

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKL 193
            M   G  PN   + +V+     +G  +    IH  A    ++  +  +  ++++ YAK 
Sbjct: 172 QMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKC 231

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           GD+  AE VF    + D+ C NAMI  Y   GY  +A++  + +   G+  ++ T+    
Sbjct: 232 GDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLF 291

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + C+    +   R  H   I S++   + +  AL+ MY +   ++ A +VF+RM  K+V+
Sbjct: 292 RACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVV 351

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WN +  G+++     +   L+     +G  P+ +TF  +L  C     L  G  +    
Sbjct: 352 TWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHV 411

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSGYCFNCCDAD 431
           +  G+     V S+LI M+  CG++  A  VF     ++ ++ +W  +L+    N     
Sbjct: 412 VDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRS 471

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L  F  +   GV  N  TF   ++ C           I   +I TG      + +SLI 
Sbjct: 472 ALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLIN 531

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G+LD + E  +     ++ +W  +++A    G    +  +   +   G +P+E  
Sbjct: 532 LYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMT 591

Query: 552 LGTILNSCAAIGAYQRTKS 570
           L  +L  C+  G   +  S
Sbjct: 592 LLNMLFGCSHNGLVAKAVS 610



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 5/211 (2%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE--MA 106
           +S SL+E+L +   G  +H H+V  G+ + + + + LI MYS CG  G  + VF +    
Sbjct: 393 ESCSLAEHLAA---GRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTT 449

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             +++SWT +++A  +NGE    L ++  M   G   N     S +  C S+GA   G++
Sbjct: 450 HSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHA 509

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           I    +      +  +G S++N Y K G +  A  VF+ +S  ++  WN ++   +  G 
Sbjct: 510 IFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGE 569

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCS 257
              +  ++  M  +G   ++ T +N L GCS
Sbjct: 570 ETLSDELLQEMDLDGAQPNEMTLLNMLFGCS 600



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 63/120 (52%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + +    ++    ++ + V G  +   ++  G   D+ L  +LI +Y KCG   + L
Sbjct: 484 VRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYAL 543

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF  ++ +N+V+W  I++A+ QNGE  +  ++  +M  +G  PNE  + +++  C   G
Sbjct: 544 EVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNG 603


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  275 bits (702), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 297/588 (50%), Gaps = 14/588 (2%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS- 236
           +N  +   ++N Y  LG+VA A   F  I + DV  WN MI GY   GY  E +   S  
Sbjct: 84  QNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLF 143

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML  G+  D  TF + L+ C  V D   G +IH L ++      + +  +LI +Y +   
Sbjct: 144 MLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGA 200

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLR 355
           +  A  +F+ M  +D+ SWN +  G+ ++ N  +  +L       G R  + VT   LL 
Sbjct: 201 VVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS-----DGLRAMDSVTVVSLLS 255

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C +  D + G+ +   ++  G   E  V++ LI ++   G+++    VFD +  +++ +
Sbjct: 256 ACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLIS 315

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++  Y  N      +  F  +  S ++ +  T   +     +    +    + G  +
Sbjct: 316 WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTL 375

Query: 476 KTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           + G F     I ++++  Y   G +D++    N     D+ SW  ++S     G   EA+
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAI 435

Query: 535 TIFHSLVEAGEK--PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            +++ + E G +   ++    ++L +C+  GA ++   +H  ++K G   +V+V +++ D
Sbjct: 436 EMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLAD 495

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KCG +  A   F Q    N V  +NTLI  +  HG   +A+ +F +M    ++P   
Sbjct: 496 MYGKCGRLDDALSLFYQIPRVNSV-PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 554

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TFV+++SACSH GLVD+G   F+ M + YG+ PS   YGC+VD+  R G LE A + I+ 
Sbjct: 555 TFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKS 614

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MP QP  +++ +LLS CR+HGN +LG+ ASE L  + P++   HVLLS
Sbjct: 615 MPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 662



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/706 (23%), Positives = 321/706 (45%), Gaps = 26/706 (3%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  +V      ++ +   L+ +Y   G        FD +  R++ +W L++S   + G 
Sbjct: 73  LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132

Query: 126 FDMGLKMY-VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               ++ + + M ++G  P+     SV+K C ++     G  IHC ALK     + +V  
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDVYVAA 189

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++ Y + G V  A  +F  + + D+G WNAMI GY   G   EAL +   +      M
Sbjct: 190 SLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR----AM 245

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T ++ L  C+   DF+ G  IH   I+  +E  + + N LID+Y +   +    KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           +RM  +D+ISWN++   +  N+ P +   LF +  LS  +P+ +T   L     +L ++ 
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIR 365

Query: 365 LGLQLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
               +Q   L  G FL++  + ++++ M+ + G V+ A +VF+ +  K++ +WN ++SGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGY 425

Query: 424 CFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
             N   ++ ++ +  + E G E+  N  T+  V+  C ++   +   ++HG ++K G   
Sbjct: 426 AQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 485

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SL   Y   G+LD++        R++   W  +++     GH  +AV +F  ++
Sbjct: 486 DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 545

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVIDAYAKCGDI 600
           + G KPD     T+L++C+  G     +     +    G    +     ++D Y + G +
Sbjct: 546 DEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQL 605

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A           D  ++  L+ A   HG V   +       L  ++P    +  ++S 
Sbjct: 606 EIALNFIKSMPLQPDASIWGALLSACRVHGNVD--LGKIASEHLFEVEPEHVGYHVLLSN 663

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
                   +G    +S+ S  G++ +P      VD      Y  +  H +          
Sbjct: 664 MYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPM-------YEE 716

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLL--LPKNDAAHVLLSKRKR 764
           +YR L +   +H   ++  +  +   +L  +  ++  H+L+S  +R
Sbjct: 717 MYRELTA---LHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSER 759



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 215/473 (45%), Gaps = 23/473 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   +K GF  D+++  +LI +Y + G       +FDEM  R++ SW  ++S   Q
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQ 228

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G     L +   ++      +   V S++  C   G    G +IH +++K  +E   FV
Sbjct: 229 SGNAKEALTLSDGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFV 284

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ YA+ G +   ++VF  +   D+  WN++I  Y        A+ +   M    I
Sbjct: 285 SNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRI 344

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKSSGMDYA 300
             D  T I+     S + +    R + G  +R    +E  I+I NA++ MY K   +D A
Sbjct: 345 QPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSA 403

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR--PNHVTFSILLRQCG 358
             VF  + +KDVISWNT+  G+++N    +   +++     G     N  T+  +L  C 
Sbjct: 404 RAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACS 463

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           +   L  G++L    L  G   +  V +SL  M+ +CG ++ A S+F  +   N   WN 
Sbjct: 464 QAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNT 523

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQ---QMVGQIH 471
           L++ + F+      +  F  + + GV+ +  TF  ++  C  S    E +   +M+   +
Sbjct: 524 LIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDY 583

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           G         C      ++  Y   GQL+ +  F      + D + WGA++SA
Sbjct: 584 GITPSLKHYGC------MVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 5/392 (1%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           SD     D + +   LS          G  +H + +K G  +++F+ N LI +Y++ G  
Sbjct: 239 SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSL 298

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VFD M  R+L+SW  I+ A   N +    + ++ +M+ +   P+   + S+  + 
Sbjct: 299 KDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASIL 358

Query: 156 VSMGASEFGYSIHCFAL-KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
             +G      S+  F L K    ++  +G +V+  YAKLG V +A  VF  + + DV  W
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISW 418

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEG--ITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           N +I GYA  G+  EA+ + + M  EG  I+ ++ T+++ L  CS       G ++HG +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +++ +   + +  +L DMY K   +D A  +F ++   + + WNTL      + +  +  
Sbjct: 479 LKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 538

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYM 391
            LF + +  G +P+H+TF  LL  C     +D G    + +    G          ++ +
Sbjct: 539 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDL 598

Query: 392 FCRCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
           + R G +E+A +   ++  + + + W  LLS 
Sbjct: 599 YGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630


>gi|449531597|ref|XP_004172772.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 680

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 319/647 (49%), Gaps = 42/647 (6%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           ++ C ++ A + G +IH +  K     + F+  ++++ YA+  +V  AE+VF  ++  ++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W  M+  +   G  +EA+ + + M  +  T + Y +   L+ C  V D  +G+ I   
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMP-KSETPNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I   +++    ++N+L+DM++K   ++ A +VF  ++     +WN +  G+S+     + 
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 332 ASLFH---------------KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH- 375
             LFH                F  +GS+      S++ ++C KL D      L+  ALH 
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHG 248

Query: 376 --------------CGFLDEENVTSSLIYMFCRCG----AVEM--AHSVFDNVSYKNITT 415
                          G+       S+LI M+  C     AV++   HS F+     N+  
Sbjct: 249 LLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLAL 308

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +LSGY  N CD   L     I  SG  ++  TF   ++ C    ++++  Q+HG I+
Sbjct: 309 WNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIV 368

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G+     + S L+  Y     +D++    +   R D+ +W  ++      G N  A +
Sbjct: 369 TCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFS 428

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  ++E   + D +++ TIL  C+ + + +  K +H   +K G+  E +  ++++D Y+
Sbjct: 429 MFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488

Query: 596 KCGDIKGARMAF--DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           KCG+I+ A   F  +Q     D++ +  +I+    +G  +EA+  F +M  + + P++ T
Sbjct: 489 KCGEIEDALTLFCCEQ---EKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEIT 545

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+ V+SAC + GLV++   +F SM S YG++P  + Y C+VD+L+  G  E+A+ +I  M
Sbjct: 546 FLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANM 605

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PF+P+ T +R+LL  C    + +L    ++ LL   P + + +V LS
Sbjct: 606 PFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLS 652



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 259/562 (46%), Gaps = 37/562 (6%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            +AK L     +++   G  +H ++ K G  ND+FL NNLI+MY++        +VFDEM
Sbjct: 5   IIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEM 64

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            +RN+V+WT +VSA    G     +++Y DM  +   PN +   +V+K C  +G    G 
Sbjct: 65  TDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGK 123

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            I     + +++ +  +  S+++ + K G +  A  VF++IS      WN ++ GY+  G
Sbjct: 124 LIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAG 183

Query: 226 YGFE------------------------------ALNVVSSMLFEGITMDKYTFINALQG 255
              E                              AL  VS M    I +D +TF  AL+ 
Sbjct: 184 LMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKI 243

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA------D 309
            +L     IG+Q+H  + +   E S   ++ALIDMY   + +  A K+F++ +       
Sbjct: 244 SALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASIS 303

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            ++  WN++  G+  N       +L  +   SG+  +  TF   L+ C  LL   +GLQL
Sbjct: 304 DNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQL 363

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L + CG+  +  V S L+ ++ +   ++ A ++F  +  K+I  W+ L+ G      +
Sbjct: 364 HGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLN 423

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
                 F  + E   E++      +++ C    + +   Q+H   +K+G+   G+  +SL
Sbjct: 424 WLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSL 483

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G+++++       +  D+ SW  ++      G   EAV  FH ++ +G  P+E
Sbjct: 484 LDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNE 543

Query: 550 YILGTILNSCAAIGAYQRTKSI 571
                +L++C   G  +  +SI
Sbjct: 544 ITFLGVLSACRYAGLVEEARSI 565



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 16/295 (5%)

Query: 35  CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           CS + L  D      +L +  NL SR +G Q+HG IV  G+  D  + + L+ +Y+K   
Sbjct: 334 CSGALL--DSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLAN 391

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
               L +F  +  +++++W+ ++    Q G   +   M+  M       + F + +++KV
Sbjct: 392 IDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKV 451

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C ++ +   G  +H   +K   E   F   S+L+ Y+K G++  A  +F      D+  W
Sbjct: 452 CSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSW 511

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC---SLVAD----FDIGRQ 267
             +I G    G   EA+     M+  GIT ++ TF+  L  C    LV +    F+  + 
Sbjct: 512 TGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKS 571

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           ++GL    E  C       ++D+       + A K+   M  + +  +W TL G 
Sbjct: 572 VYGLEPHLEHYC------CMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGA 620



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 15/217 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   ++  L +  NL S   G QVH   VK G+  + F   +L+ MYSKCG     L +F
Sbjct: 441 DHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLF 500

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
               E+++VSWT I+    QNG+    ++ + +M  +G  PNE     V+  C   G  E
Sbjct: 501 CCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVE 560

Query: 163 FGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNA 216
              SI       + L+  +E      C +++  A +G    AE++  ++    +   W  
Sbjct: 561 EARSIFNSMKSVYGLEPHLEHY----CCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRT 616

Query: 217 MIGGYAHCGYGFEA--LNVVSSMLFEGITMDKYTFIN 251
           ++G    CG   +   +N V+  L E    D  T++ 
Sbjct: 617 LLGA---CGTRNDTKLINRVADGLLEATPNDPSTYVT 650



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 91/178 (51%), Gaps = 4/178 (2%)

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           I+   L  CA + A++R  +IH ++ K G   +V++A+ +I  YA+  +++ A   FD+ 
Sbjct: 5   IIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEM 64

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            + N ++ + T++ A+   G   EA+ +++ M  +   P+   + +V+ AC   G +  G
Sbjct: 65  TDRN-IVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLG 122

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            L+ + +  +  +Q        L+DM  + G L DA  V   +  + + T +  ++SG
Sbjct: 123 KLIQERI-YEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTTWNIIVSG 178


>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 699

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/600 (27%), Positives = 301/600 (50%), Gaps = 19/600 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           + HC A+K     + +   +++  Y+K   +  A ++F  +   D   WNA+I GY +  
Sbjct: 20  ATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTA 79

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
                  ++++M   G   D +TF + L+G +     ++G+Q+H ++I+  +  ++   +
Sbjct: 80  DLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGS 139

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           AL+DMY K   +D A  VF  M + + +SWNTL  G+S   +      L     L G   
Sbjct: 140 ALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGI 199

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  T S LL     +    L +QL C  +  G      V +++I  +  C +++ A  VF
Sbjct: 200 DDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVF 259

Query: 406 D---NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
                V+ +++ TWN +L+ Y  +  +      F  +   G E +  ++  V+  C   E
Sbjct: 260 VGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKE 319

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ--LDNSFEFSNGAERLDMASWGAM 520
           ++     +HG +IK G      + ++LI  Y+ F    ++++       +  D  +W ++
Sbjct: 320 HKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSV 379

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++  V  G + +A+ +F  +     + D+Y    ++  C+ +   Q  + +H   +K+GF
Sbjct: 380 LAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGF 439

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           +T  YV              K A+  F+ + N N  I++N++I  YA HG  + A+E+F 
Sbjct: 440 DTNKYVG-------------KDAKKCFETTSNDN-AIIWNSIIFGYAQHGQGNIALELFY 485

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M+   ++P   TFV+V++ACSH GLV++G  + +SM+S +G+    + Y C VD+  R 
Sbjct: 486 LMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRA 545

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           GYLE+ K ++E MPF+P   V R+LL  CR  GN EL    ++ LL+L P++ + +VLLS
Sbjct: 546 GYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLS 605



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/598 (24%), Positives = 257/598 (42%), Gaps = 24/598 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            H   +K G  +D++  NNLI  YSKC      L++FD+M +R+ VSW  ++S  +   +
Sbjct: 21  THCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTAD 80

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            D   ++   M+ +G   +    GS +K        E G  +H   +K+R+ +N F G +
Sbjct: 81  LDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSA 140

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +L+ YAK G V  A  VF  +   +   WN +I GY+  G    A  ++     EG+ +D
Sbjct: 141 LLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGID 200

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF- 304
             T    L     V  + +  Q+H  I++  +E    + NA+I  Y +   +  A +VF 
Sbjct: 201 DGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFV 260

Query: 305 --ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
               +  +D+++WN++   +  +K       +F +    G  P+  +++ ++  C     
Sbjct: 261 GAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEH 320

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFC----RCGAVEMAHSVFDNVSYKNITTWNE 418
              G  L  L +  G      V+++LI M+     RC  +E A  +F ++  K+  TWN 
Sbjct: 321 KSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMDVKDCCTWNS 378

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +L+GY       D L+ F  +    VE++  TF  V+  C      Q+  Q+H   +K G
Sbjct: 379 VLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVG 438

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F +  Y+     K +      DN+              W +++      G  + A+ +F+
Sbjct: 439 FDTNKYVGKDAKKCFETTSN-DNAI------------IWNSIIFGYAQHGQGNIALELFY 485

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            + E   KPD      +L +C+  G  +   K I       G    +   +  +D Y + 
Sbjct: 486 LMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRA 545

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           G ++  +   +      D +V  TL+ A    G +  A  +  KM L       +T+V
Sbjct: 546 GYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHV-AKMLLVLEPEDHSTYV 602



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 179/402 (44%), Gaps = 18/402 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H  ++K+    ++F  + L+ MY+KCG     L VF  M E N VSW  +++   
Sbjct: 118 LGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYS 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           + G+ DM   +    +  G   ++  V  ++ +   +        +HC  +K  +E    
Sbjct: 178 RVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNI 237

Query: 182 VGCSVLNFYAKLGDVAAAERVF---YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           V  +++  Y++   +  AERVF    +++  D+  WN+M+  Y        A +V   M 
Sbjct: 238 VCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQ 297

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI--KSSG 296
             G   D Y++   + GCS+      G  +HGL+I+   E S+ + NALI MY+   +  
Sbjct: 298 SFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC 357

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M+ A ++F  M  KD  +WN++  G+ +         LF +        +  TFS ++R 
Sbjct: 358 MEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRC 417

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L LG Q+  L+L  GF   + V                A   F+  S  N   W
Sbjct: 418 CSDLATLQLGQQVHVLSLKVGFDTNKYVGKD-------------AKKCFETTSNDNAIIW 464

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           N ++ GY  +      L+ F  + E  V+ +  TF  V+  C
Sbjct: 465 NSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTAC 506



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/394 (22%), Positives = 176/394 (44%), Gaps = 41/394 (10%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--- 107
           L+L + ++   L  Q+H  IVK G      + N +I  YS+C       RVF        
Sbjct: 208 LTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTC 267

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           R+LV+W  +++A + + + ++   ++++M++ GF P++++   V+  C        G S+
Sbjct: 268 RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESL 327

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGD--VAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           H   +K   E +  V  +++  Y    +  +  A R+F+S+   D   WN+++ GY   G
Sbjct: 328 HGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVG 387

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +AL +   +    + +D YTF   ++ CS +A   +G+Q+H L ++   + +     
Sbjct: 388 RSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTN----- 442

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
                  K  G D A K FE  ++ + I WN++  G++++        LF+       +P
Sbjct: 443 -------KYVGKD-AKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKP 494

Query: 346 NHVTFSILLRQCG------------KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +H+TF  +L  C             + ++ D G+ L+     C            + ++ 
Sbjct: 495 DHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACA-----------VDLYG 543

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           R G +E   ++ + + ++        L G C +C
Sbjct: 544 RAGYLEEGKALVETMPFEPDAMVLRTLLGACRSC 577



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 7/174 (4%)

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           ++ H   IK G  +++Y ++ +I AY+KC  +  A   FD+     D + +N +I  Y +
Sbjct: 19  QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDK-MPQRDTVSWNAVISGYVN 77

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
              +    ++ + M+++       TF S +   +    ++ G  L   M     M+ + +
Sbjct: 78  TADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVM---IKMRLNEN 134

Query: 689 CY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
            +    L+DM ++ G ++DA  V   MP + +   + +L++G    G+ ++  W
Sbjct: 135 VFSGSALLDMYAKCGRVDDALVVFRYMP-ECNYVSWNTLIAGYSRVGDLDMAFW 187



 Score = 42.7 bits (99), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 24/218 (11%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F+  D    +  +    +L +  LG QVH   +K+GF  + ++  +      KC      
Sbjct: 403 FVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVGKDA----KKC------ 452

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
              F+  +  N + W  I+    Q+G+ ++ L+++  M+     P+     +V+  C   
Sbjct: 453 ---FETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHN 509

Query: 159 GASEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVG 212
           G  E G  I       F + +R+E      C+V + Y + G +   + +  ++    D  
Sbjct: 510 GLVEEGRKIIQSMESDFGIPLRMEH---YACAV-DLYGRAGYLEEGKALVETMPFEPDAM 565

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
               ++G    CG   E  + V+ ML      D  T++
Sbjct: 566 VLRTLLGACRSCG-NIELASHVAKMLLVLEPEDHSTYV 602


>gi|302782105|ref|XP_002972826.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
 gi|300159427|gb|EFJ26047.1| hypothetical protein SELMODRAFT_173139 [Selaginella moellendorffii]
          Length = 624

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 180/628 (28%), Positives = 304/628 (48%), Gaps = 16/628 (2%)

Query: 136 MKTNGFMPNEFAVGSVMKV-CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           M+ +G  PN+F +  V+   C S+   +  ++  C + +     +   G + +N Y K G
Sbjct: 1   MQQDGIAPNKFLLVRVLSSGCSSLAQGKLAHA--CLS-EATSGSDRVAGNAAINMYGKFG 57

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            V +A+ VF  +   D+  W  M+  YA  G+  +A  V   ML EG+  +K TF+  L 
Sbjct: 58  CVESAKVVFDRVLERDIITWTLMVSAYAQNGHTRQAFQVFGKMLVEGVVPNKVTFLAILN 117

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVI 313
            CS  ++      +H L+  S  + +  + ++L+D Y K   +  A  VF  M DK +V+
Sbjct: 118 ACSSSSEAAF---VHRLLFESGFQFTAKVESSLVDAYGKCKNVSAARAVFSSMTDKTNVV 174

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           +WN      + +++       F   +L G  P+ VTF I   Q  K         L+   
Sbjct: 175 TWNAFIRALASSRDASGALQTFRSLLLQGLVPDTVTF-INASQGAK--TPPEAKYLEACR 231

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G   +  + ++LI MF        A  VFD    KNI +WN +LS Y  N    + +
Sbjct: 232 QESGVQLDVALGNTLINMFGGSSQPCEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETI 291

Query: 434 KTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
             F  +  +  V+ +  TF  V+ +C   EN +     H A ++ G      + ++LI+ 
Sbjct: 292 ALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQM 351

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y     L+ + +  + +   D+ +W  M+SA    G   EA+ +F  +      PD    
Sbjct: 352 YSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTV---PPDGVAF 408

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
            T+L +CA+    +  + +   +++LG + E  VA+AV+D Y KC +I      F +   
Sbjct: 409 ATVLGACASSENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGR-MR 467

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
             D + +NT++ AYA  G  + ++  F  M+L  + PS+ + VS +S  SH GLV++GC 
Sbjct: 468 QRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSALSTYSHAGLVEQGCQ 527

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIH 732
            F S+ S YGM PS +  GC+VD+L R G       +  + P      +++++LS CRIH
Sbjct: 528 CFASIASDYGMVPSREQQGCVVDLLGRAGSWIAEDLIRVVAPSTSRSELWKAVLSACRIH 587

Query: 733 GNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + ELGE A+  +L + P +D+AH++LS
Sbjct: 588 SDVELGECAAACVLEMDPGSDSAHIILS 615



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/508 (25%), Positives = 232/508 (45%), Gaps = 11/508 (2%)

Query: 53  LSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           LS    S   G   H  + +    +D    N  I MY K G       VFD + ER++++
Sbjct: 17  LSSGCSSLAQGKLAHACLSEATSGSDRVAGNAAINMYGKFGCVESAKVVFDRVLERDIIT 76

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           WTL+VSA  QNG      +++  M   G +PN+    +++  C S   + F   +H    
Sbjct: 77  WTLMVSAYAQNGHTRQAFQVFGKMLVEGVVPNKVTFLAILNACSSSSEAAF---VHRLLF 133

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEAL 231
           +   +    V  S+++ Y K  +V+AA  VF S++   +V  WNA I   A       AL
Sbjct: 134 ESGFQFTAKVESSLVDAYGKCKNVSAARAVFSSMTDKTNVVTWNAFIRALASSRDASGAL 193

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
               S+L +G+  D  TFINA QG     +    + +      S V+  +++ N LI+M+
Sbjct: 194 QTFRSLLLQGLVPDTVTFINASQGAKTPPE---AKYLEACRQESGVQLDVALGNTLINMF 250

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTF 350
             SS    A +VF+   +K+++SWN +   +S+N +  +T +LF +   + + +P+ +TF
Sbjct: 251 GGSSQPCEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKPDKLTF 310

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
           + +L  C  L +L  G      A+  G      V ++LI M+ +C  +E A  +F     
Sbjct: 311 ASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPS 370

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            ++  W  ++S Y  N    + +  F   +   V  +G  F  V+  C  SEN +    +
Sbjct: 371 SDVVAWTVMISAYAQNGRPQEAIALF---FRMTVPPDGVAFATVLGACASSENLEAGRVV 427

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
              I++ G  +   + ++++  Y    ++  + E      + D  SW  M++A    GH 
Sbjct: 428 RAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYARAGHT 487

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNS 558
             ++  F ++   G  P E  L + L++
Sbjct: 488 AGSLWCFRAMQLEGVCPSEVSLVSALST 515



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
            Q  S   ++ D +  A  LS   NL++   G   H   V+ G    + +   LI MYSK
Sbjct: 295 KQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSK 354

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        +F      ++V+WT+++SA  QNG     + ++  M      P+  A  +V
Sbjct: 355 CHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVP---PDGVAFATV 411

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C S    E G  +    +++ ++    V  +VL+ Y K  ++     +F  +   D 
Sbjct: 412 LGACASSENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDR 471

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL----------QGC----S 257
             WN M+  YA  G+   +L    +M  EG+   + + ++AL          QGC    S
Sbjct: 472 VSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSALSTYSHAGLVEQGCQCFAS 531

Query: 258 LVADFDI--GRQIHGLII 273
           + +D+ +   R+  G ++
Sbjct: 532 IASDYGMVPSREQQGCVV 549


>gi|449445246|ref|XP_004140384.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Cucumis sativus]
          Length = 688

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 319/647 (49%), Gaps = 42/647 (6%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           ++ C ++ A + G +IH +  K     + F+  ++++ YA+  +V  AE+VF  ++  ++
Sbjct: 10  LRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEMTDRNI 69

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W  M+  +   G  +EA+ + + M  +  T + Y +   L+ C  V D  +G+ I   
Sbjct: 70  VTWTTMVSAFTDGGRPYEAIRLYNDMP-KSETPNGYMYSAVLKACGFVGDLGLGKLIQER 128

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I   +++    ++N+L+DM++K   ++ A +VF  ++     +WN +  G+S+     + 
Sbjct: 129 IYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAGLMVEA 188

Query: 332 ASLFH---------------KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH- 375
             LFH                F  +GS+      S++ ++C KL D      L+  ALH 
Sbjct: 189 EKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKISALHG 248

Query: 376 --------------CGFLDEENVTSSLIYMFCRCG----AVEM--AHSVFDNVSYKNITT 415
                          G+       S+LI M+  C     AV++   HS F+     N+  
Sbjct: 249 LLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASISDNLAL 308

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN +LSGY  N CD   L     I  SG  ++  TF   ++ C    ++++  Q+HG I+
Sbjct: 309 WNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQLHGLIV 368

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
             G+     + S L+  Y     +D++    +   R D+ +W  ++      G N  A +
Sbjct: 369 TCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFS 428

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  ++E   + D +++ TIL  C+ + + +  K +H   +K G+  E +  ++++D Y+
Sbjct: 429 MFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYS 488

Query: 596 KCGDIKGARMAF--DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           KCG+I+ A   F  +Q     D++ +  +I+    +G  +EA+  F +M  + + P++ T
Sbjct: 489 KCGEIEDALTLFCCEQ---EKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEIT 545

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+ V+SAC + GLV++   +F SM S YG++P  + Y C+VD+L+  G  E+A+ +I  M
Sbjct: 546 FLGVLSACRYAGLVEEARSIFNSMKSVYGLEPHLEHYCCMVDLLASVGLPEEAEKLIANM 605

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           PF+P+ T +R+LL  C    + +L    ++ LL   P + + +V LS
Sbjct: 606 PFEPNQTTWRTLLGACGTRNDTKLINRVADGLLEATPNDPSTYVTLS 652



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 259/562 (46%), Gaps = 37/562 (6%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            +AK L     +++   G  +H ++ K G  ND+FL NNLI+MY++        +VFDEM
Sbjct: 5   IIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEM 64

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            +RN+V+WT +VSA    G     +++Y DM  +   PN +   +V+K C  +G    G 
Sbjct: 65  TDRNIVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLGK 123

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            I     + +++ +  +  S+++ + K G +  A  VF++IS      WN ++ GY+  G
Sbjct: 124 LIQERIYEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNISRATTTTWNIIVSGYSKAG 183

Query: 226 YGFE------------------------------ALNVVSSMLFEGITMDKYTFINALQG 255
              E                              AL  VS M    I +D +TF  AL+ 
Sbjct: 184 LMVEAEKLFHCMPHPNVVSWNSMIAGFADNGSQRALEFVSMMHKRCIKLDDFTFPCALKI 243

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA------D 309
            +L     IG+Q+H  + +   E S   ++ALIDMY   + +  A K+F++ +       
Sbjct: 244 SALHGLLFIGKQVHSYVTKLGYESSCFTLSALIDMYSNCNDLIEAVKLFDQHSSFNASIS 303

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            ++  WN++  G+  N       +L  +   SG+  +  TF   L+ C  LL   +GLQL
Sbjct: 304 DNLALWNSMLSGYVINNCDQAALNLLSEIHCSGALLDSYTFGGALKVCINLLSRRVGLQL 363

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
             L + CG+  +  V S L+ ++ +   ++ A ++F  +  K+I  W+ L+ G      +
Sbjct: 364 HGLIVTCGYELDYVVGSILVDLYAKLANIDDALAIFHRLPRKDIIAWSGLIMGCAQIGLN 423

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
                 F  + E   E++      +++ C    + +   Q+H   +K+G+   G+  +SL
Sbjct: 424 WLAFSMFKGMLELVNEIDHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSL 483

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G+++++       +  D+ SW  ++      G   EAV  FH ++ +G  P+E
Sbjct: 484 LDMYSKCGEIEDALTLFCCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNE 543

Query: 550 YILGTILNSCAAIGAYQRTKSI 571
                +L++C   G  +  +SI
Sbjct: 544 ITFLGVLSACRYAGLVEEARSI 565



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 16/295 (5%)

Query: 35  CSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY 94
           CS + L  D      +L +  NL SR +G Q+HG IV  G+  D  + + L+ +Y+K   
Sbjct: 334 CSGALL--DSYTFGGALKVCINLLSRRVGLQLHGLIVTCGYELDYVVGSILVDLYAKLAN 391

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
               L +F  +  +++++W+ ++    Q G   +   M+  M       + F + +++KV
Sbjct: 392 IDDALAIFHRLPRKDIIAWSGLIMGCAQIGLNWLAFSMFKGMLELVNEIDHFVISTILKV 451

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C ++ +   G  +H   +K   E   F   S+L+ Y+K G++  A  +F      D+  W
Sbjct: 452 CSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLFCCEQEKDIVSW 511

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC---SLVAD----FDIGRQ 267
             +I G    G   EA+     M+  GIT ++ TF+  L  C    LV +    F+  + 
Sbjct: 512 TGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVEEARSIFNSMKS 571

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           ++GL    E  C       ++D+       + A K+   M  + +  +W TL G 
Sbjct: 572 VYGLEPHLEHYC------CMVDLLASVGLPEEAEKLIANMPFEPNQTTWRTLLGA 620



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 15/217 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   ++  L +  NL S   G QVH   VK G+  + F   +L+ MYSKCG     L +F
Sbjct: 441 DHFVISTILKVCSNLASLRSGKQVHALCVKSGYEMEGFTITSLLDMYSKCGEIEDALTLF 500

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
               E+++VSWT I+    QNG+    ++ + +M  +G  PNE     V+  C   G  E
Sbjct: 501 CCEQEKDIVSWTGIIVGCGQNGKAAEAVRFFHEMIRSGITPNEITFLGVLSACRYAGLVE 560

Query: 163 FGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNA 216
              SI       + L+  +E      C +++  A +G    AE++  ++    +   W  
Sbjct: 561 EARSIFNSMKSVYGLEPHLEHY----CCMVDLLASVGLPEEAEKLIANMPFEPNQTTWRT 616

Query: 217 MIGGYAHCGYGFEA--LNVVSSMLFEGITMDKYTFIN 251
           ++G    CG   +   +N V+  L E    D  T++ 
Sbjct: 617 LLGA---CGTRNDTKLINRVADGLLEATPNDPSTYVT 650



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 91/178 (51%), Gaps = 4/178 (2%)

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
           I+   L  CA + A++R  +IH ++ K G   +V++A+ +I  YA+  +++ A   FD+ 
Sbjct: 5   IIAKDLRHCATVRAFKRGNAIHAYLRKFGGLNDVFLANNLISMYAEFFNVRDAEKVFDEM 64

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            + N ++ + T++ A+   G   EA+ +++ M  +   P+   + +V+ AC   G +  G
Sbjct: 65  TDRN-IVTWTTMVSAFTDGGRPYEAIRLYNDMPKSE-TPNGYMYSAVLKACGFVGDLGLG 122

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
            L+ + +  +  +Q        L+DM  + G L DA  V   +  + + T +  ++SG
Sbjct: 123 KLIQERI-YEDKLQADTILMNSLMDMFVKCGSLNDAVEVFHNIS-RATTTTWNIIVSG 178


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1134

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/480 (32%), Positives = 260/480 (54%), Gaps = 5/480 (1%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N LIDMY K      A+KVF+ M +++V+SW  L  G   N +   + SLF +    G  
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TFS  L+ CG L  L+ GLQ+    L  GF     V +SL+ M+ +CG +  A  V
Sbjct: 468 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 527

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF-FYVVETCCRSEN 463
           F  +  +++ +WN +++GY      +  L TF  + E+ ++     F    +   C S  
Sbjct: 528 FRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTG 587

Query: 464 QQMVG-QIHGAIIKTGF--SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               G QIHG ++++GF   S   I  SL+  YV  G L ++ +  +  +   M SW ++
Sbjct: 588 MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSL 647

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +     +G   EA+ +F  L E   + D ++L +I+   A     Q+ K +   V+KL  
Sbjct: 648 ILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPS 707

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             E  V+++++D Y KCG +  A   F +     DVI +  +I  Y  HGL  +A+ IF+
Sbjct: 708 GLETSVSNSLVDMYLKCGLVDEAEKCFAE-MQLKDVISWTVMITGYGKHGLGKKAVSIFN 766

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           KM   N++P +  +++V+SACSH G++ +G  LF  +    G++P  + Y C+VD+L R 
Sbjct: 767 KMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRA 826

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L++AKH+++ MP +P+  ++++LLS CR+HG+ ELG+   + LL +  KN A +V++S
Sbjct: 827 GRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMS 886



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 197/388 (50%), Gaps = 4/388 (1%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           ++   N LI MY KC       +VFD M ERN+VSWT ++S  + NG+ +  L ++ +M 
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G  PNEF   + +K C  + A E G  IH F LKI  E    VG S+++ Y+K G + 
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 522

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT--MDKYTFINALQG 255
            AE+VF  +    +  WNAMI GY H GYG  AL     M    I    D++T  + L+ 
Sbjct: 523 EAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKA 582

Query: 256 CSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           CS       G+QIHG ++RS   C  S +I  +L+D+Y+K   +  A K F+++ +K +I
Sbjct: 583 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMI 642

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW++L  G+++  +  +   LF +     S+ +    S ++        L  G Q+Q L 
Sbjct: 643 SWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALV 702

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +      E +V++SL+ M+ +CG V+ A   F  +  K++ +W  +++GY  +      +
Sbjct: 703 VKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAV 762

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRS 461
             F  +    +E +   +  V+  C  S
Sbjct: 763 SIFNKMLRHNIEPDEVCYLAVLSACSHS 790



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 176/373 (47%), Gaps = 22/373 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG  +K+GF   + + N+L+ MYSKCG      +VF  M  R+L+SW  +++  + 
Sbjct: 489 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVH 548

Query: 123 NGEFDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEK 178
            G     L  +  M+       P+EF + S++K C S G    G  IH F ++       
Sbjct: 549 AGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 608

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  S+++ Y K G++ +A + F  I    +  W+++I GYA  G   EA+ +   + 
Sbjct: 609 SATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQ 668

Query: 239 FEGITMDKYTFINALQGCSLVADFDI---GRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                +D +   + +    + ADF +   G+Q+  L+++       S+ N+L+DMY+K  
Sbjct: 669 ELSSQIDSFVLSSII---GVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCG 725

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D A K F  M  KDVISW  +  G+ ++    +  S+F+K +     P+ V +  +L 
Sbjct: 726 LVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLS 785

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFDNVS 409
            C        G+  +   L    L+ + +   + +  C      R G ++ A  + D + 
Sbjct: 786 ACSH-----SGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMP 840

Query: 410 YK-NITTWNELLS 421
            K N+  W  LLS
Sbjct: 841 IKPNVGIWQTLLS 853



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 127/283 (44%), Gaps = 4/283 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF--TNDIFLQNNLIAMYSKCGYFGWG 98
           R D   L   L    +      G Q+HG +V+ GF   +   +  +L+ +Y KCG     
Sbjct: 570 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSA 629

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            + FD++ E+ ++SW+ ++    Q G+F   + ++  ++      + F + S++ V    
Sbjct: 630 RKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADF 689

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              + G  +    +K+       V  S+++ Y K G V  AE+ F  +   DV  W  MI
Sbjct: 690 ALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMI 749

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-V 277
            GY   G G +A+++ + ML   I  D+  ++  L  CS       G ++   ++ ++ +
Sbjct: 750 TGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGI 809

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLF 319
           +  +     ++D+  ++  +  A  + + M  K +V  W TL 
Sbjct: 810 KPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLL 852


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 188/744 (25%), Positives = 330/744 (44%), Gaps = 96/744 (12%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNN------LIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           S + G   +G + +     D F+  N      L+  Y+K G       VF+ M ERN+VS
Sbjct: 207 SMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS 266

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++S  +QNG+     K++ +M                                    
Sbjct: 267 WNAMISGYVQNGDLKNARKLFDEMP----------------------------------- 291

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
               EKN     SV+  Y     ++ A  +F  +   +   W  MI GY H    +EA +
Sbjct: 292 ----EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWD 347

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           V   M       D+  F+  L   + + D ++   +  + I++  E  + + +A+++ Y 
Sbjct: 348 VFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYT 407

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           ++  +D A   FE M +++  SW T+   F++         L+ + +   +         
Sbjct: 408 RNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYER-VPEQTVATKTAMMT 466

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDE---ENVTS--SLIYMFCRCGAVEMAHSVFDN 407
              Q G++    L              DE    NV +  ++I  + + G ++ A  +F  
Sbjct: 467 AYAQVGRIQKARL------------IFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  KN  +W  +++G+  N    + L+    +  SG   +  +F   +  C    + ++ 
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ----------------------------- 498
             IH   IKTG     Y+ + LI  Y   G                              
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSEN 634

Query: 499 --LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
             LD++        + D+ SW A++SA V  GH   A+ +F  ++  G KP++  + ++L
Sbjct: 635 YMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLL 694

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++C  +GA +  +  H  + KLGF+T ++V +++I  Y KCG   G      +    +D+
Sbjct: 695 SACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYEDG--FCVFEEMPEHDL 752

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +N +++  A +GL  EA++IF++M++  + P Q +F+ V+ ACSH GLVD+G   F S
Sbjct: 753 ITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNS 812

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M  +YG+ P    Y C+VD+L R GYL +A+ +IE MP +P   ++ +LL  CRIH N E
Sbjct: 813 MTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVE 872

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           LG+  +E+L  +     A +VLLS
Sbjct: 873 LGQRVAERLFQMTKPKSATYVLLS 896



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/490 (21%), Positives = 201/490 (41%), Gaps = 104/490 (21%)

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A +VF  M  +DV+SWN++  G+S+N    +   LF  F+    R    T++ILL  
Sbjct: 187 VEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIR----TWTILLTG 242

Query: 357 CGKLLDLDLGLQ----------LQCLALHCGF---------------LDEENVTS--SLI 389
             K   ++   +          +   A+  G+               + E+NV S  S++
Sbjct: 243 YAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVV 302

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
             +C C  +  A  +FD +  +N  +W  ++SGY       +    F  +  +    +  
Sbjct: 303 TGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQS 362

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
            F  V+      ++ +++G +    IKTG+     + S+++ +Y   G LD +  F    
Sbjct: 363 IFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETM 422

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              +  SW  M++A    G   +A+ ++  + E                           
Sbjct: 423 PERNEYSWTTMIAAFAQCGRLDDAIQLYERVPE--------------------------- 455

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
                         V   +A++ AYA+ G I+ AR+ FD+  N N V+ +N +I  Y  +
Sbjct: 456 ------------QTVATKTAMMTAYAQVGRIQKARLIFDEILNPN-VVAWNAIIAGYTQN 502

Query: 630 GLVSEAMEIFDKMKLANLQ-------------------------------PSQATFVSVM 658
           G++ EA ++F KM + N                                 PS ++F S +
Sbjct: 503 GMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSAL 562

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SAC++ G V+ G ++  S+  + G Q +      L+ M ++ G +ED  HV   +  + +
Sbjct: 563 SACANIGDVEIGRVI-HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDT 621

Query: 719 PTVYRSLLSG 728
            + + SL+SG
Sbjct: 622 VS-WNSLISG 630



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 151/339 (44%), Gaps = 39/339 (11%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG---------------- 93
           +LS   N+    +G  +H   +K G   + ++ N LI+MY+KCG                
Sbjct: 561 ALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKD 620

Query: 94  YFGW-----GLR----------VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
              W     GL           VF++M +R++VSWT I+SA +Q G  ++ L +++DM  
Sbjct: 621 TVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLA 680

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
            G  PN+  V S++  C ++GA + G   H    K+  +   FVG S++  Y K G    
Sbjct: 681 RGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YED 739

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
              VF  +   D+  WNA++ G A  G G EA+ +   M  EGI  D+ +F+  L  CS 
Sbjct: 740 GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSH 799

Query: 259 VADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWN 316
               D G    + +  +  +   +     ++D+  ++  +  A  + E M  K D + W 
Sbjct: 800 AGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWE 859

Query: 317 TLFGG--FSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            L G      N   GQ  +   + +   ++P   T+ +L
Sbjct: 860 ALLGACRIHRNVELGQRVA---ERLFQMTKPKSATYVLL 895



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 7/185 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +   LS   NL +  LG Q H  I KLGF   +F+ N+LI MY KCGY   G 
Sbjct: 683 IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GF 741

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+EM E +L++W  ++    QNG     +K++  M+  G +P++ +   V+  C   G
Sbjct: 742 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 801

Query: 160 ASEFGYSIHCFALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
             + G++ H  ++  +    P V    C V +   + G ++ AE +  ++    D   W 
Sbjct: 802 LVDEGWA-HFNSMTQKYGIMPLVYHYTCMV-DLLGRAGYLSEAEALIENMPVKPDSVIWE 859

Query: 216 AMIGG 220
           A++G 
Sbjct: 860 ALLGA 864



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 47/265 (17%)

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           + C++ I+     G+++ +    N   + D+ SW +M++     G   EA  +F + V  
Sbjct: 172 FQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFV-- 229

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS--AVIDAYAKCGDIK 601
           G+    + +  +L   A  G  +  + +   +      TE  V S  A+I  Y + GD+K
Sbjct: 230 GKNIRTWTI--LLTGYAKEGRIEEAREVFESM------TERNVVSWNAMISGYVQNGDLK 281

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN--------------- 646
            AR  FD+    N V  +N+++  Y H   +SEA E+FD+M   N               
Sbjct: 282 NARKLFDEMPEKN-VASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHIS 340

Query: 647 ----------------LQPSQATFVSVMSACSHKGLVDKGCL-LFKSMDSQYGMQPSPDC 689
                            +P Q+ FV V+SA +  GL D   +   + +  + G +     
Sbjct: 341 DYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT--GLDDLELIGSLRPIAIKTGYEGDVVV 398

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMP 714
              +++  +RNG L+ A H  E MP
Sbjct: 399 GSAILNAYTRNGSLDLAMHFFETMP 423



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 76/148 (51%), Gaps = 11/148 (7%)

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            T ++  +  I    + G ++ AR  F++     DV+ +N++I  Y+ +G V EA  +FD
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQ-RDVVSWNSMINGYSQNGKVDEARLLFD 226

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
                N++    T+  +++  + +G +++   +F+SM  +  +      +  ++    +N
Sbjct: 227 AFVGKNIR----TWTILLTGYAKEGRIEEAREVFESMTERNVV-----SWNAMISGYVQN 277

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           G L++A+ + + MP + +   + S+++G
Sbjct: 278 GDLKNARKLFDEMP-EKNVASWNSVVTG 304


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 174/541 (32%), Positives = 277/541 (51%), Gaps = 16/541 (2%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T +N+L  CS  +      QIH  +I + +     + N L+++Y K   +D    +F   
Sbjct: 31  TSLNSLLNCSRTSKH--ATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSA 88

Query: 308 AD--KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            D  K+V+SW +L    +  K P +  + F+    SG  PNH TFS +L  C        
Sbjct: 89  PDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVH 148

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G Q+  L    GFL E  V S+L+ M+ +C  + MA  VF+ +  +N+ +WN ++ G+  
Sbjct: 149 GEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQ 208

Query: 426 NCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
           N      +  F  +  E+   ++  +F  V   C  + N +   Q+HG  +K G  +  Y
Sbjct: 209 NKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVY 268

Query: 485 ICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I +SL   Y   G  ++  + FSN   R D+ +W  M+ A V+  +  +A   F  +   
Sbjct: 269 INNSLSDMYGKCGLFNDVAKLFSNTGAR-DVVTWNIMIMAYVYNHNYEDACNSFWMMRRK 327

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PDE    ++L+SCA + A  +   IH  +I+ GF   + VAS++I  YAKCG +  A
Sbjct: 328 GSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDA 387

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F+++ + N V+ +  +I A   HG  +  +E+F++M    ++P   TFVSV+SACSH
Sbjct: 388 FQIFEETEDRN-VVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSH 446

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V++G   F SM   +G+ P  + Y C+VD+LSR G L+ AK  IE+MP +P  +V+ 
Sbjct: 447 TGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWG 506

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGI 783
           +LLS CR H N  +G+  + KL  L P N   +VLL         N+L   G+ N  D +
Sbjct: 507 ALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLC--------NILTRNGMLNEADEV 558

Query: 784 K 784
           +
Sbjct: 559 R 559



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 245/535 (45%), Gaps = 8/535 (1%)

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAM 217
            S+    IH   +   +   PF+  ++LN YAK G V     +F S   D  +V  W ++
Sbjct: 42  TSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSL 101

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I         F+AL   + M   G+  + YTF   L  C+       G Q+H L+ +   
Sbjct: 102 ITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGF 161

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              + +V+AL+DMY K   M  A KVFE M  ++++SWNT+  GF +NK   Q    F  
Sbjct: 162 LAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKT 221

Query: 338 FILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            +L   +  + V+FS +   C    +L+ G Q+  +AL  G  +   + +SL  M+ +CG
Sbjct: 222 LLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCG 281

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
                  +F N   +++ TWN ++  Y +N    D   +F  +   G   +  ++  V+ 
Sbjct: 282 LFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLH 341

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           +C           IH  II++GF     + SSLI  Y   G L ++F+     E  ++  
Sbjct: 342 SCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVC 401

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W A+++A    GH +  V +F  ++  G KPD     ++L++C+  G  +        +I
Sbjct: 402 WTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMI 461

Query: 577 KL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
           K+ G        + ++D  ++ G++  A+   +      D  V+  L+ A  +H  +   
Sbjct: 462 KVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMG 521

Query: 636 MEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            E+   +KL +L+P     +V + +  +  G++++   + + M+S  G++  P C
Sbjct: 522 KEV--ALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMES-IGVRKEPGC 573



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 220/473 (46%), Gaps = 19/473 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSAA 120
            TQ+H  ++     +  FL NNL+ +Y+KCG     L +F    +  +N+VSWT +++  
Sbjct: 46  ATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQL 105

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            +       L  +  M+ +G  PN +   +V+  C    AS  G  +H    K       
Sbjct: 106 TRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEV 165

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  ++++ YAK  D+  AE+VF  +   ++  WN MI G+       +A+    ++L E
Sbjct: 166 FVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLE 225

Query: 241 GIT-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            +T +D+ +F +    C+   + + G+Q+HG+ ++  V   + I N+L DMY K    + 
Sbjct: 226 NLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFND 285

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
             K+F     +DV++WN +   +  N N     + F      GS P+  ++S +L  C  
Sbjct: 286 VAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCAN 345

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L  G  +    +  GF+    V SSLI M+ +CG++  A  +F+    +N+  W  +
Sbjct: 346 LAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAI 405

Query: 420 LSGYCFNCCDAD-VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ-------MVGQIH 471
           ++  C     A+ V++ F  +   G++ +  TF  V+  C  +   +        + ++H
Sbjct: 406 IAA-CQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVH 464

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           G  I  G      I   L ++    G+LD +  F      + D + WGA++SA
Sbjct: 465 G--IYPGHEHYACIVDLLSRA----GELDRAKRFIELMPIKPDASVWGALLSA 511



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 180/380 (47%), Gaps = 6/380 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   +  + V G Q+H  + K GF  ++F+ + L+ MY+KC       +VF+EM  RNL
Sbjct: 137 LSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNL 196

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHC 169
           VSW  ++   +QN  +D  +  +  +        +E +  SV   C + G  EFG  +H 
Sbjct: 197 VSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHG 256

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
            ALK+ +    ++  S+ + Y K G      ++F +  + DV  WN MI  Y +     +
Sbjct: 257 VALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYED 316

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           A N    M  +G   D+ ++ + L  C+ +A    G  IH  IIRS    ++ + ++LI 
Sbjct: 317 ACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLIT 376

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  AF++FE   D++V+ W  +     ++ +      LF + +  G +P+++T
Sbjct: 377 MYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYIT 436

Query: 350 FSILLRQCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           F  +L  C     ++ G       + +H  +   E+  + ++ +  R G ++ A    + 
Sbjct: 437 FVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHY-ACIVDLLSRAGELDRAKRFIEL 495

Query: 408 VSYK-NITTWNELLSGYCFN 426
           +  K + + W  LLS  C N
Sbjct: 496 MPIKPDASVWGALLSA-CRN 514



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 155/340 (45%), Gaps = 23/340 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVHG  +KLG  N +++ N+L  MY KCG F    ++F     R++V+W +++ A +
Sbjct: 250 FGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYV 309

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            N  ++     +  M+  G +P+E +  SV+  C ++ A   G  IH   ++    KN  
Sbjct: 310 YNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLR 369

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++  YAK G +  A ++F      +V CW A+I      G+    + +   ML EG
Sbjct: 370 VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREG 429

Query: 242 ITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSEVECSISIVNALIDMYIKS 294
           I  D  TF++ L  CS     + G        ++HG+    E    I      +D+  ++
Sbjct: 430 IKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACI------VDLLSRA 483

Query: 295 SGMDYAFKVFERMADK-DVISWNTLFGGFSENKN--PGQTASLFHKFILSGSRP-NHVTF 350
             +D A +  E M  K D   W  L      + N   G+  +L   F L    P N+V  
Sbjct: 484 GELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVAL-KLFDLEPDNPGNYVLL 542

Query: 351 SILLRQCGKLLDLD-LGLQLQCLALH----CGFLDEENVT 385
             +L + G L + D +  +++ + +     C ++D +N T
Sbjct: 543 CNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNST 582


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 173/622 (27%), Positives = 307/622 (49%), Gaps = 33/622 (5%)

Query: 143 PNEF---AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           P+EF   A  + ++ C+       G  +HC  LK     + F    +LN Y K   +  A
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            ++F  +   +   +  +I GYA      EA+ +   +  EG  ++ + F   L+    +
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSM 152

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              ++G  IH  I +   E +  +  ALID Y     +D A +VF+ +  KD++SW  + 
Sbjct: 153 DCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMV 212

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             F+EN    +   LF +  + G +PN+ TF+ + + C  L   D+G  +   AL   + 
Sbjct: 213 TCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYE 272

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V  +L+ ++ + G ++ A   F+ +  K++  W+ +++ Y  +    + ++ F  +
Sbjct: 273 LDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQM 332

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            ++ V  N  TF  V++ C   E   +  QIH  +IK G  S  ++ ++L+  Y   G++
Sbjct: 333 RQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 392

Query: 500 DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +NS   F+    R D+  W  ++   V  G   +A+ +F +++E   +  E    + L +
Sbjct: 393 ENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 452

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA++ A +    IH   +K  F+ ++ V +A+ID YAKCG IK AR+ FD   N  D + 
Sbjct: 453 CASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDL-MNKQDEVS 511

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +N +I  Y+ HGL                            AC++ GL+D+G   F SM 
Sbjct: 512 WNAMISGYSMHGL----------------------------ACANAGLLDQGQAYFTSMI 543

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
             +G++P  + Y C+V +L R G+L+ A  +I+ +PFQPS  V+R+LL  C IH + ELG
Sbjct: 544 QDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELG 603

Query: 739 EWASEKLLLLLPKNDAAHVLLS 760
             +++ +L + P++ A HVLLS
Sbjct: 604 RISAQHVLEMEPQDKATHVLLS 625



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 228/467 (48%), Gaps = 1/467 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+K G   D+F  N L+ MY K  +     ++FDEM ERN +S+  ++    +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +  F   ++++V +   G   N F   +++K+ VSM   E G+ IH    K+  E N FV
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFV 176

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y+  G V  A  VF  I   D+  W  M+  +A      EAL + S M   G 
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + +TF +  + C  +  FD+G+ +HG  ++S  E  + +  AL+D+Y KS  +D A  
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARX 296

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            FE +  KDVI W+ +   ++++    +   +F +   +   PN  TF+ +L+ C  +  
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELLS 421
           L+LG Q+ C  +  G   +  V+++L+ ++ +CG +E +  +F    ++N +T WN ++ 
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIV 416

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+         L+ F N+ E  V+    T+   +  C      +   QIH   +KT F  
Sbjct: 417 GHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDK 476

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
              + ++LI  Y   G + ++    +   + D  SW AM+S     G
Sbjct: 477 DIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG 523



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/395 (32%), Positives = 204/395 (51%), Gaps = 4/395 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P      L L  ++    LG  +H  I KLG  ++ F+   LI  YS CG       VF
Sbjct: 138 NPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +  +++VSWT +V+   +N  F   LK++  M+  GF PN F   SV K C+ + A +
Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFD 257

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G S+H  ALK R E + +VG ++L+ Y K GD+  A   F  I   DV  W+ MI  YA
Sbjct: 258 VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYA 317

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EA+ +   M    +  +++TF + LQ C+ +   ++G QIH  +I+  +   + 
Sbjct: 318 QSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 377

Query: 283 IVNALIDMYIKSSGMDYAFKVF-ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           + NAL+D+Y K   M+ +  +F E     DV  WNT+  G  +  +  +   LF   +  
Sbjct: 378 VSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEY 437

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             +   VT+S  LR C  L  L+ GLQ+  L +   F  +  VT++LI M+ +CG+++ A
Sbjct: 438 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDA 497

Query: 402 HSVFDNVSYKNITTWNELLSGYCFN---CCDADVL 433
             VFD ++ ++  +WN ++SGY  +   C +A +L
Sbjct: 498 RLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLL 532


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 268/532 (50%), Gaps = 3/532 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EA + +  M    +++  +++    + C  +     GR IH  + R+    S SI N L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY          KVF+ M  K+++SW  +   +++N    +   LF     SG RPN  
Sbjct: 130 RMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSA 189

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
            +  LL+ C     L+LG Q+    +         V +++  M+ RCG +E A  VFD +
Sbjct: 190 VYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM 249

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +N  TW  L+ GY         L+ F  +   GVE++   F  V++ CC  E+  M  
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGK 309

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQ 527
           QIH  I+K G  S   + + L+  YV  G +++++  F   +E  D+ SW A++S     
Sbjct: 310 QIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDV-SWSALISGFSQS 368

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   + + IF SL   G   + +I  ++  +CAA          H   IK G  + +Y  
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE 428

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA++  Y+KCG +  AR AF +S +  D + +  +I  YA+HG  +EA+  F +M+   +
Sbjct: 429 SAMVTMYSKCGRLDYARRAF-ESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P+  TF++V++ACSH GLV +      SM   YG++P+ D Y C++D  SR G L +A 
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEAL 547

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            +I  MPF+P    ++SLL GC  H + +LG+ A+E L  L P + A ++LL
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILL 599



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 227/474 (47%), Gaps = 14/474 (2%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            L+S   G  +H  + +        ++N L+ MY  CG      +VFDEM  +NLVSW +
Sbjct: 99  KLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVI 158

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++SA  +NGE +  ++++ DM+ +G  PN     S+++ C+     E G  +H   ++ +
Sbjct: 159 VISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQ 218

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  V  ++ N Y + G +  A+ VF  + + +   W  ++ GY        AL + +
Sbjct: 219 LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFA 278

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  EG+ +D++ F   L+ C  + D+D+G+QIH  I++   E  +S+   L+D Y+K  
Sbjct: 279 RMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCG 338

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A++ F R+++ + +SW+ L  GFS++        +F      G   N   ++ + +
Sbjct: 339 DIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQ 398

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    +L++G Q    A+  G +      S+++ M+ +CG ++ A   F+++   +   
Sbjct: 399 ACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVA 458

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI- 470
           W  ++SGY ++   A+ L  F  +   GV  N  TF  V+  C  S    E +Q +G + 
Sbjct: 459 WTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMS 518

Query: 471 --HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMM 521
             +G         C      +I +Y   G L  + E  N      D  SW +++
Sbjct: 519 RDYGVKPTIDHYDC------MIDTYSRAGLLXEALELINRMPFEPDAMSWKSLL 566



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 132/542 (24%), Positives = 244/542 (45%), Gaps = 40/542 (7%)

Query: 175 RIEKNPF--VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           R  KNP   +   +L  Y   G     ++VF  +   ++  W  +I  YA  G   +A+ 
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S M   GI  +   +++ LQ C   +  ++G+Q+H  +IR+++  +I++  A+ +MY+
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYV 234

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           +   ++ A  VF+ M  ++ ++W  L  G+++ K       LF +  + G   +   FSI
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+ C  L D D+G Q+    +  G   E +V + L+  + +CG +E A+  F  +S  N
Sbjct: 295 VLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             +W+ L+SG+  +    D +K F ++   GV +N   +  V + C    N  M  Q HG
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             IK G  S  Y  S+++  Y   G+LD +       +  D  +W A++S   + G+  E
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+  F  +   G +P+      +L +C+  G     K        LG  +  Y     ID
Sbjct: 475 ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY------LGSMSRDYGVKPTID 528

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
                                     Y+ +I  Y+  GL+ EA+E+ ++M     +P   
Sbjct: 529 H-------------------------YDCMIDTYSRAGLLXEALELINRMP---FEPDAM 560

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC-YGCLVDMLSRNGYLEDAKHVIE 711
           ++ S++  C     +  G +  +++   + + P     Y  L ++ S  G  E+A HV +
Sbjct: 561 SWKSLLGGCWAHCDLKLGKIAAENL---FRLDPGDTAGYILLFNLYSAFGKWEEAGHVRK 617

Query: 712 IM 713
           +M
Sbjct: 618 LM 619



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/203 (21%), Positives = 90/203 (44%), Gaps = 8/203 (3%)

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           + +L  QG   EA      + +A      +    +  +C  + +    + IH  + +   
Sbjct: 59  LVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVK 118

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           N    + + ++  Y  CG     +  FD+    N ++ +  +I AYA +G + +A+ +F 
Sbjct: 119 NPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKN-LVSWVIVISAYAKNGELEKAIRLFS 177

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDML 697
            M+ + ++P+ A ++S++ +C     ++ G    K M S   +  +  +      + +M 
Sbjct: 178 DMQASGIRPNSAVYMSLLQSCLGPSFLELG----KQMHSHVIRAQLNANITVETAICNMY 233

Query: 698 SRNGYLEDAKHVIEIMPFQPSPT 720
            R G+LE AK V + M  Q + T
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVT 256


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 313/621 (50%), Gaps = 7/621 (1%)

Query: 144  NEFAVGSVMKVCVSMGASEFGYSIHCFALK----IRIEKNPFVGCSVLNFYAKLGDVAAA 199
            + +A   +++ CV+ G +  G ++H   ++     R++   F    +LN Y K+G   +A
Sbjct: 427  DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDL--FCANVLLNMYTKVGPFGSA 484

Query: 200  ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
             RVF  +   ++  +  ++ G+A  G   EA  +   + +EG  ++++     L+    +
Sbjct: 485  HRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAM 544

Query: 260  ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
                +   +H    +   + +  + +ALID Y     +  A +VF+ +  KD ++W  + 
Sbjct: 545  DTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMV 604

Query: 320  GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
              +SEN  P  T  +F K  ++ S+ N    + +LR    L  + LG  +   ++   + 
Sbjct: 605  SCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYD 664

Query: 380  DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
             E +V  +L+ M+ +CG +E A   F+ V+  ++  W+ ++S Y     +    + F  +
Sbjct: 665  TERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRM 724

Query: 440  WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              S V  N  +   V++ C       +  QIH   IK G  S  ++ ++LI  Y     +
Sbjct: 725  MRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM 784

Query: 500  DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            ++S E  +    ++  SW  ++      G    A+++F  +  A     +    ++L +C
Sbjct: 785  ESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRAC 844

Query: 560  AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
            A+  +      +H  + K  FN++  V++++ID+YAKCG I+ AR  F ++    D++ +
Sbjct: 845  ASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIF-ETLKECDLVSW 903

Query: 620  NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
            N +I  YA HG  + A E+FD M   +++ +  TFV+++S C   GLV +G  LF SM  
Sbjct: 904  NAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRL 963

Query: 680  QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
             +G++PS + Y C+V +L R G L DA + I  +P  PS  V+R+LLS C +H N ELG 
Sbjct: 964  DHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGR 1023

Query: 740  WASEKLLLLLPKNDAAHVLLS 760
            +++EK+L + P+++  +VLLS
Sbjct: 1024 FSAEKVLEIEPQDETTYVLLS 1044



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 157/619 (25%), Positives = 288/619 (46%), Gaps = 6/619 (0%)

Query: 63   GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
            G  VHGH+V+ G     D+F  N L+ MY+K G FG   RVFD + ERN+VS+  +V   
Sbjct: 447  GRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGH 506

Query: 121  IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
               GEF+    ++  ++  G   N+F + +V+K+ V+M      + +H  A K+  ++N 
Sbjct: 507  ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566

Query: 181  FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            FVG ++++ Y+  G V+ A RVF  I   D   W AM+  Y+        L + S M   
Sbjct: 567  FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626

Query: 241  GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               ++ +   + L+    ++   +G+ IH   +++  +    +  AL+DMY K   ++ A
Sbjct: 627  VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDA 686

Query: 301  FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
               FE + + DVI W+ +   +++     Q   LF + + S   PN  + S +L+ C  +
Sbjct: 687  RLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANM 746

Query: 361  LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              LDLG Q+   A+  G   E  V ++LI ++ +C  +E +  +F ++   N  +WN ++
Sbjct: 747  PLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTII 806

Query: 421  SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             GY  +      L  F  +  + V     T+  V+  C  + +   VGQ+H  I K+ F+
Sbjct: 807  VGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFN 866

Query: 481  SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            S   + +SLI SY   G + ++ E     +  D+ SW A++S     G    A  +F  +
Sbjct: 867  SDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMM 926

Query: 541  VEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGD 599
             +   K ++     +L+ C + G   +  S+     +  G    +   + ++    + G 
Sbjct: 927  SKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGR 986

Query: 600  IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSVM 658
            +  A        ++   +V+  L+ +   H  V   +  F   K+  ++P  + T+V + 
Sbjct: 987  LNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVE--LGRFSAEKVLEIEPQDETTYVLLS 1044

Query: 659  SACSHKGLVDKGCLLFKSM 677
            +  S  G +D+     KSM
Sbjct: 1045 NMYSAAGSLDQVAFFRKSM 1063



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 247/525 (47%), Gaps = 17/525 (3%)

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI--VNALIDMY 291
           ++S+ F    +D Y +   LQGC    D   GR +HG ++RS     + +   N L++MY
Sbjct: 416 LTSLAFPWPGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMY 475

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K      A +VF+ + +++++S+ TL  G +      + ++LF +    G   N    +
Sbjct: 476 TKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLT 535

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L+    +  L L   +   A   G      V S+LI  +  CG V  A  VFD +  K
Sbjct: 536 TVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGK 595

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           +   W  ++S Y  N C  + L+ F  +  +  ++N      V+       +  +   IH
Sbjct: 596 DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIH 655

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
              +KT + +  ++  +L+  Y   G ++++          D+  W  M+S       N 
Sbjct: 656 ACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNE 715

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A  +F  ++ +   P+E+ L ++L +CA +      K IH   IK+G  +E++V +A+I
Sbjct: 716 QAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALI 775

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D YAKC D++ +   F    + N+V  +NT+I+ Y+  G    A+ +F +M+ A++  +Q
Sbjct: 776 DLYAKCSDMESSLEIFSSLRDVNEV-SWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQ 834

Query: 652 ATFVSVMSACSHKGLVDK----GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            T+ SV+ AC+    ++      CL+ KS  +   +         L+D  ++ G + DA+
Sbjct: 835 VTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTI-----VSNSLIDSYAKCGCIRDAR 889

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
            + E +  +     + +++SG  +HG   +    +++L  ++ KN
Sbjct: 890 EIFETLK-ECDLVSWNAIISGYAVHGQAAM----AQELFDMMSKN 929



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 183/381 (48%), Gaps = 2/381 (0%)

Query: 43   DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
            +P  L   L  +  L S VLG  +H   VK  +  +  +   L+ MY+KCG        F
Sbjct: 631  NPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAF 690

Query: 103  DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            + +   +++ W+L++S   Q  + +   ++++ M  +   PNEF++ SV++ C +M   +
Sbjct: 691  EMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLD 750

Query: 163  FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
             G  IH  A+KI  E   FVG ++++ YAK  D+ ++  +F S+   +   WN +I GY+
Sbjct: 751  LGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYS 810

Query: 223  HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
              G+G  AL+V   M    +   + T+ + L+ C+  A  +   Q+H LI +S       
Sbjct: 811  KSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTI 870

Query: 283  IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
            + N+LID Y K   +  A ++FE + + D++SWN +  G++ +        LF     + 
Sbjct: 871  VSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNS 930

Query: 343  SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             + N +TF  LL  CG    +  GL L   + L  G        + ++ +  R G +  A
Sbjct: 931  IKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDA 990

Query: 402  HSVFDNV-SYKNITTWNELLS 421
             +   ++ S  +   W  LLS
Sbjct: 991  LNFIGDIPSAPSAMVWRALLS 1011


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 293/551 (53%), Gaps = 5/551 (0%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN ++   +   +  + +   S M  +    D +T   AL+ C  + +   G  IHG + 
Sbjct: 9   WNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHGFLK 68

Query: 274 RS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++  +   + + ++LI MY+K   M  A ++F  +   D+++W+++  GF +N +P Q  
Sbjct: 69  KNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAV 128

Query: 333 SLFHKF-ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
             F +    S   P+ VT   L+  C KL +  LG  +    +  GF ++ ++ +SL+  
Sbjct: 129 EFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNC 188

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           + +  A + A ++F  ++ K++ +W+ +++ Y  N   A+ L+ F  + + G E N  T 
Sbjct: 189 YAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATV 248

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V++ C  + + +   + H   I+ G  +   + ++L+  Y+     + ++   +   +
Sbjct: 249 LCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPK 308

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFH-SLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
            D+ SW A++S     G  H ++  F   L+E   +PD  ++  +L SC+ +G  ++ + 
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAEC 368

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            H +VIK GF++  ++ +++++ Y++CG +  A   F++     D +V+ +LI  Y  HG
Sbjct: 369 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNE-IALKDTVVWTSLITGYGIHG 427

Query: 631 LVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             ++A+E F+ M + + ++P++ TF+S++SACSH GL+ +G  +F+ M + Y + P+ + 
Sbjct: 428 KGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEH 487

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y  LVD+L R G L+ A  + + MPF P+P +  +LL  CRIH N E+ E  +++L  L 
Sbjct: 488 YAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELE 547

Query: 750 PKNDAAHVLLS 760
             +   ++L+S
Sbjct: 548 SNHAGYYMLMS 558



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/518 (25%), Positives = 252/518 (48%), Gaps = 14/518 (2%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +R L  W  ++ +  ++  ++  +  +  M  +   P+ F +   +K C  +   ++G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 165 YSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
             IH F  K + +  + +VG S++  Y K G +  A R+F  +   D+  W++M+ G+  
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 224 CGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G  ++A+     M     +T D+ T I  +  C+ +++  +GR +HG ++R      +S
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +VN+L++ Y KS     A  +F+ MA+KDVISW+T+   + +N    +   +F++ I  G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           + PN  T   +L+ C    DL+ G +   LA+  G   E  V+++L+ M+ +C + E A+
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVETCCRS 461
           +VF  +  K++ +W  L+SG+  N      ++ F   + E+    +      V+ +C   
Sbjct: 301 AVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSEL 360

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
              +     H  +IK GF S  +I +SL++ Y   G L N+ +  N     D   W +++
Sbjct: 361 GFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLI 420

Query: 522 SALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVI---K 577
           +     G   +A+  F+ +V + E KP+E    +IL++C+  G       I   ++   +
Sbjct: 421 TGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYR 480

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGA-----RMAFDQS 610
           L  N E Y  + ++D   + G++  A     RM F  +
Sbjct: 481 LAPNLEHY--AVLVDLLGRVGELDTAIEITKRMPFSPT 516



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 208/422 (49%), Gaps = 4/422 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           + D   L  +L     L+    G  +HG + K +   +D+++ ++LI MY KCG     L
Sbjct: 38  KPDNFTLPVALKACGELREVKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEAL 97

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSM 158
           R+F+E+ + ++V+W+ +VS   +NG     ++ +  M T +   P+   + +++  C  +
Sbjct: 98  RMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKL 157

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
             S  G  +H F ++     +  +  S+LN YAK      A  +F  ++  DV  W+ +I
Sbjct: 158 SNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVI 217

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             Y   G   EAL V + M+ +G   +  T +  LQ C+   D + GR+ H L IR  +E
Sbjct: 218 ACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLE 277

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             + +  AL+DMY+K    + A+ VF R+  KDV+SW  L  GF+ N    ++   F   
Sbjct: 278 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIM 337

Query: 339 IL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           +L + +RP+ +    +L  C +L  L          +  GF     + +SL+ ++ RCG+
Sbjct: 338 LLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGS 397

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVE 456
           +  A  VF+ ++ K+   W  L++GY  +      L+TF + +  S V+ N  TF  ++ 
Sbjct: 398 LGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILS 457

Query: 457 TC 458
            C
Sbjct: 458 AC 459



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 2/327 (0%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +  + S +  D + L   +S    L +  LG  VHG +++ GF+ND+ L N+L+  Y+K 
Sbjct: 133 RMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKS 192

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
             F   + +F  MAE++++SW+ +++  +QNG     L+++ +M  +G  PN   V  V+
Sbjct: 193 RAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVL 252

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           + C +    E G   H  A++  +E    V  ++++ Y K      A  VF  I   DV 
Sbjct: 253 QACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVV 312

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGL 271
            W A+I G+   G    ++   S ML E  T  D    +  L  CS +         H  
Sbjct: 313 SWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSY 372

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +I+   + +  I  +L+++Y +   +  A KVF  +A KD + W +L  G+  +    + 
Sbjct: 373 VIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKA 432

Query: 332 ASLFHKFILSGS-RPNHVTFSILLRQC 357
              F+  + S   +PN VTF  +L  C
Sbjct: 433 LETFNHMVRSSEVKPNEVTFLSILSAC 459


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/498 (30%), Positives = 258/498 (51%), Gaps = 34/498 (6%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+ YA  +FE + + +++ WNT+F G + N +      L+   I  G  PN  +F  LL+
Sbjct: 14  GLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK 73

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN-------- 407
            C K   L  G Q+    L  G+  +  V +SLI M+ + G +E AH VFD         
Sbjct: 74  SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133

Query: 408 -----------------------VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
                                  +S K++ +WN ++SGY   C   + L+ + ++ ++ V
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + +  T   VV  C +S + ++  Q+H  I   GF S   I + LI  Y   G+++ +  
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G  + D+ SW  ++    H     EA+ +F  ++ +GE P++  + ++L +CA +GA
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313

Query: 565 YQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
               + IH ++ K   G      + +++ID YAKCGDI+ A+  FD S  +  +  +N +
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFD-SMLTRSLSSWNAM 372

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  +A HG  + A ++F KM+   + P   TFV ++SACSH G++D G  +F+SM   Y 
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           + P  + YGC++D+L   G  ++AK +I  MP +P   ++ SLL  C++H N ELGE  +
Sbjct: 433 ITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYA 492

Query: 743 EKLLLLLPKNDAAHVLLS 760
           + L+ + P+N  ++VLLS
Sbjct: 493 QNLIKIEPENPGSYVLLS 510



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 188/400 (47%), Gaps = 33/400 (8%)

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
             + + +F+ + E NL+ W  +      N +    LK+YV M + G +PN ++   ++K 
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF----------Y 204
           C    A   G  IH   LK+  + + +V  S+++ YA+ G +  A +VF          Y
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 205 S---------------------ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           +                     IS  DV  WNAMI GY       EAL +   M+   + 
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D+ T +  +  C+     ++GRQ+H  I       +I IVN LID+Y K   ++ A  +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ +A KDVISWNTL GG +      +   LF + + SG  PN VT   +L  C  L  +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 364 DLGLQLQCL--ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D+G  +         G  +  ++ +SLI M+ +CG +E A  VFD++  +++++WN ++ 
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIF 374

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           G+  +         F  + ++G++ +  TF  ++  C  S
Sbjct: 375 GFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHS 414



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 173/357 (48%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG------------ 93
           FL KS + S   K+ + G Q+HGH++KLG+  D+++  +LI+MY++ G            
Sbjct: 70  FLLKSCAKS---KALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRS 126

Query: 94  -------------------YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                              Y     ++FDE++ +++VSW  ++S  ++   F   L++Y 
Sbjct: 127 SHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYK 186

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           DM      P+E  + +V+  C   G+ E G  +H +        N  +   +++ Y+K G
Sbjct: 187 DMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG 246

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +F  ++  DV  WN +IGG+ H     EAL +   ML  G + +  T ++ L 
Sbjct: 247 EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    V  + S++ +LIDMY K   ++ A +VF+ M  + +
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +        LF K   +G  P+ +TF  LL  C     LDLG  +
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/500 (31%), Positives = 255/500 (51%), Gaps = 35/500 (7%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+ YA  VFE + + + + WN +F G + + +P     L+   I  G  PN  TF  LL+
Sbjct: 24  GLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLK 83

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN------VS 409
            C K      G Q+    L  GF  +  V +SLI M+ + G +E A  VFD       VS
Sbjct: 84  SCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVS 143

Query: 410 Y-------------------------KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           Y                         K++ +WN ++SGY         L+ F  + ++ V
Sbjct: 144 YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNV 203

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           + +  T   VV  C +S + ++  Q+H  I   GF S   I ++LI  Y   G+++ + E
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACE 263

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G    D+ SW  ++    H     EA+ +F  ++ +GE P++  + +IL +CA +GA
Sbjct: 264 LLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 323

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAV----IDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
               + IH ++ K      V  AS++    ID YAKCGDI  A    D S  +  +  +N
Sbjct: 324 IDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWN 383

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            +I  +A HG  + A +IF +M+   ++P   TFV ++SACSH G++D G  +F+SM   
Sbjct: 384 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQD 443

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y + P  + YGC++D+L  +G  ++A+ +I  MP +P   ++ SLL  C+IHGN ELGE 
Sbjct: 444 YNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
            ++KL+ + P+N  ++VLLS
Sbjct: 504 FAKKLIKIEPENPGSYVLLS 523



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/524 (24%), Positives = 236/524 (45%), Gaps = 81/524 (15%)

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           + + VF+ + E N + W ++      + +    LK+YV M + G +PN F    ++K C 
Sbjct: 27  YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCA 86

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD--------------------- 195
                + G  IH   LK+  + + +V  S+++ YA+ G                      
Sbjct: 87  KSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTA 146

Query: 196 ----------VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
                     + +A+++F  I   DV  WNAMI GYA  G   +AL +   M+   +  D
Sbjct: 147 LITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPD 206

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T    +  C+     ++GRQ+H  I       ++ IVNALID+Y K   ++ A ++ E
Sbjct: 207 ESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLE 266

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +++KDVISWNTL GG++      +   LF + + SG  PN VT   +L  C  L  +D+
Sbjct: 267 GLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 326

Query: 366 GLQLQCLALHCGFLDEE----------NVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNIT 414
           G  +        ++D++          ++ +SLI M+ +CG ++ A  V D+ ++ ++++
Sbjct: 327 GRWIHV------YIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN ++ G+  +         F  + ++G+E +  TF  ++  C            H  +
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS-----------HSGM 429

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +  G +    I  S+ + Y    +L++               +G M+  L H G   EA 
Sbjct: 430 LDLGRN----IFRSMRQDYNITPKLEH---------------YGCMIDLLGHSGLFKEAE 470

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            + +++     +PD  I  ++L +C   G  +  +S    +IK+
Sbjct: 471 EMINTM---PMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKI 511



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 39/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC------------- 92
           FL KS + S+  K    G Q+HGH++KLGF  D+++  +LI+MY++              
Sbjct: 80  FLLKSCAKSKTFKE---GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136

Query: 93  ------------------GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                             GY     ++FDE+  +++VSW  ++S   + G +   L+++ 
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + +V+  C   G+ E G  +H +        N  +  ++++ Y+K G
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +   +S+ DV  WN +IGGY H     EAL +   ML  G T +  T ++ L 
Sbjct: 257 EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 316

Query: 255 GCSLVADFDIGRQIHGLIIRS----EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-D 309
            C+ +   DIGR IH  I +      V  + S+  +LIDMY K   +D A +V +  A +
Sbjct: 317 ACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           + + +WN +  GF+ +        +F +   +G  P+ +TF  LL  C     LDLG
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG 433



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 5/234 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   +A  +S      S  LG QVH  I   GF +++ + N LI +YSKCG      
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            + + ++ ++++SW  ++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322

Query: 160 ASEFGYSIHCFALK----IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
           A + G  IH +  K    + +     +  S+++ YAK GD+ AA +V  S + +  +  W
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           NAMI G+A  G    A ++ S M   GI  D  TF+  L  CS     D+GR I
Sbjct: 383 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/618 (28%), Positives = 310/618 (50%), Gaps = 12/618 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS--S 208
           ++K C+  G  E G  +H   +   +  +  +  S++  Y+K GD   A  +F ++    
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSML---FEGITMDKYTFINALQGCSLVADFDIG 265
            D+  W+A+I  +A+      AL     ML      I  ++Y F   L+ CS    F  G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 266 RQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDY--AFKVFERMADKDVISWNTLFGGF 322
             I   ++++   +  + +  ALIDM+ K  G+D   A  VF++M  K++++W  +   +
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKG-GLDIQSARMVFDKMQHKNLVTWTLMITRY 223

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           S+         LF + ++S   P+  T + LL  C +L    LG QL    +  G   + 
Sbjct: 224 SQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDV 283

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V  +L+ M+ +  AVE +  +F+ + + N+ +W  L+SGY  +  + + +K FCN+   
Sbjct: 284 FVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHG 343

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            V  N  TF  V++ C    +  +  Q+HG  IK G S+   + +SLI  Y   G ++ +
Sbjct: 344 HVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECA 403

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  N     ++ S+     A      + E+    H +   G     +    +L+  A I
Sbjct: 404 RKAFNILFEKNLISYNTAADANAKALDSDESFN--HEVEHTGVGASPFTYACLLSGAACI 461

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           G   + + IH  ++K GF T + + +A+I  Y+KCG+ + A   F+      +VI + ++
Sbjct: 462 GTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFND-MGYRNVITWTSI 520

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  +A HG  ++A+E+F +M    ++P++ T+++V+SACSH GL+D+    F SM   + 
Sbjct: 521 ISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHS 580

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           + P  + Y C+VD+L R+G L +A   I  MPF     V+R+ L  CR+H N +LGE A+
Sbjct: 581 ISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA 640

Query: 743 EKLLLLLPKNDAAHVLLS 760
           +K+L   P + A ++LLS
Sbjct: 641 KKILEREPHDPATYILLS 658



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 159/573 (27%), Positives = 275/573 (47%), Gaps = 35/573 (6%)

Query: 18  FHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
           F + RK I RL       + S L K  + L K+   S NL+   LG  +H  ++  G   
Sbjct: 21  FESLRKAISRL----DLTTTSPLIKSSLLL-KACIRSGNLE---LGKLLHHKLIDSGLPL 72

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           D  L N+LI +YSKCG +   L +F  M   +R+LVSW+ I+S    N      L  ++ 
Sbjct: 73  DSVLLNSLITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLH 132

Query: 136 M---KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYA 191
           M     N   PNE+   ++++ C +      G +I  F LK    + +  VGC++++ + 
Sbjct: 133 MLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFT 192

Query: 192 KLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           K G D+ +A  VF  +   ++  W  MI  Y+  G   +A+++   +L    T DK+T  
Sbjct: 193 KGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLT 252

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           + L  C  +  F +G+Q+H  +IRS +   + +   L+DMY KS+ ++ + K+F  M   
Sbjct: 253 SLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHH 312

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +V+SW  L  G+ +++   +   LF   +     PN  TFS +L+ C  L D  +G QL 
Sbjct: 313 NVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLH 372

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
              +  G      V +SLI M+ R G +E A   F+ +  KN+ ++N        N    
Sbjct: 373 GQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA---NAKAL 429

Query: 431 DVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVG------QIHGAIIKTGFSSCG 483
           D  ++F + +  +GV  +  T+       C       +G      QIH  I+K+GF +  
Sbjct: 430 DSDESFNHEVEHTGVGASPFTY------ACLLSGAACIGTIVKGEQIHALIVKSGFGTNL 483

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            I ++LI  Y   G  + + +  N     ++ +W +++S     G   +A+ +F+ ++E 
Sbjct: 484 CINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEI 543

Query: 544 GEKPDEYILGTILNSCAAIG----AYQRTKSIH 572
           G KP+E     +L++C+ +G    A++   S+H
Sbjct: 544 GVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMH 576



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 4/268 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G Q+HG  +KLG +    + N+LI MY++ G      + F+ + E+NL+S+     A  
Sbjct: 367 IGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANA 426

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +  + D      V+    G  P  F    ++     +G    G  IH   +K     N  
Sbjct: 427 KALDSDESFNHEVEHTGVGASP--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLC 484

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y+K G+  AA +VF  +   +V  W ++I G+A  G+  +AL +   ML  G
Sbjct: 485 INNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIG 544

Query: 242 ITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           +  ++ T+I  L  CS V   D   +  + +     +   +     ++D+  +S  +  A
Sbjct: 545 VKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEA 604

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            +    M  D D + W T  G    ++N
Sbjct: 605 IEFINSMPFDADALVWRTFLGSCRVHRN 632


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 277/533 (51%), Gaps = 3/533 (0%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA--LNVVSSML 238
           ++  S++N YAK   +  A+ VF  I + DV  WN +I GY+  G    +  + +   M 
Sbjct: 41  YIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMR 100

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            E    + +TF       S + D   GR  H + I+ +    + + ++L++MY K+    
Sbjct: 101 AENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTP 160

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A KVF+ M +++ +SW T+  G++  K   +   LF          N   F+ +L    
Sbjct: 161 EARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALT 220

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               ++ G Q+ C+A+  G L   +V ++L+ M+ +CG+++ A   F+  S KN  TW+ 
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           +++G   +      LK F ++  SG+  +  TF  V+  C          Q+H  ++K G
Sbjct: 281 MITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F S  Y+ ++L+  Y     + ++ +  +  +  D+  W +M+   V  G N +A++++ 
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYG 400

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G  P+E  + ++L +C+++ A ++ K IH   +K GF  EV + SA+   YAKCG
Sbjct: 401 RMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCG 460

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +K   + F +   + DVI +N +I   + +G   EA+E+F++M+L   +P   TFV+++
Sbjct: 461 CLKDGTLVF-RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNIL 519

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           SACSH GLV++G   F+ M  ++GM P  + Y C+VD+LSR G L++A    E
Sbjct: 520 SACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTE 572



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 256/545 (46%), Gaps = 6/545 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+K   ++ +++ N+L+ +Y+KC        VF+ +  +++VSW  I++   Q
Sbjct: 25  GKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83

Query: 123 NGEFDMG--LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +G       ++++  M+     PN      V     ++  +  G   H  A+K+   ++ 
Sbjct: 84  HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDV 143

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S++N Y K G    A +VF ++   +   W  MI GYA      EAL +   M  E
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               +++ F + L   +L    + G+QIH + +++ +   +S+ NAL+ MY K   +D A
Sbjct: 204 EEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDA 263

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            + FE  +DK+ I+W+ +  G +++ +  +   LF    LSG RP+  TF  ++  C  L
Sbjct: 264 LQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDL 323

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
                G Q+    L  GF  +  V ++L+ M+ +C ++  A   FD +   +I  W  ++
Sbjct: 324 GAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMI 383

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY  N  + D L  +  +   G+  N  T   V++ C      +   QIH   +K GF 
Sbjct: 384 GGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443

Query: 481 SCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               I S+L   Y   G L D +  F     R D+ SW AM+S L   G   EA+ +F  
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMISGLSQNGCGKEALELFEE 502

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCG 598
           +   G KPD      IL++C+ +G  +R       +  + G +  V   + ++D  ++ G
Sbjct: 503 MQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAG 562

Query: 599 DIKGA 603
            +K A
Sbjct: 563 KLKEA 567



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 240/488 (49%), Gaps = 6/488 (1%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           +F  AL   +       G+ +H  II+S   C + I N+L+++Y K   +  A  VFER+
Sbjct: 8   SFFTALLQYTHNRSLQKGKALHAQIIKSSSSC-VYIANSLVNLYAKCQRLREAKFVFERI 66

Query: 308 ADKDVISWNTLFGGFSENKNPGQT--ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +KDV+SWN +  G+S++   G +    LF +     + PN  TF+ +      L+D   
Sbjct: 67  QNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAG 126

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G     +A+      +  V SSL+ M+C+ G    A  VFD +  +N  +W  ++SGY  
Sbjct: 127 GRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYAS 186

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
               A+ L  F  +       N   F  V+      E      QIH   +K G  S   +
Sbjct: 187 QKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSV 246

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y   G LD++ +    +   +  +W AM++     G + +A+ +F S+  +G 
Sbjct: 247 GNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGI 306

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P E+    ++N+C+ +GA    K +H +++KLGF +++YV +A++D YAKC  I  AR 
Sbjct: 307 RPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARK 366

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD      D++++ ++I  Y  +G   +A+ ++ +M++  + P++ T  SV+ ACS   
Sbjct: 367 GFDY-LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLA 425

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
            +++G  +  +   +YG          L  M ++ G L+D   V   MP +   + + ++
Sbjct: 426 ALEQGKQI-HARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVIS-WNAM 483

Query: 726 LSGCRIHG 733
           +SG   +G
Sbjct: 484 ISGLSQNG 491



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 172/331 (51%), Gaps = 11/331 (3%)

Query: 30  GNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMY 89
           G N+F   S L         +L+L E + +   G Q+H   VK G  + + + N L+ MY
Sbjct: 206 GENEFVFTSVL--------SALTLPELVNN---GKQIHCIAVKNGLLSIVSVGNALVTMY 254

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
           +KCG     L+ F+  +++N ++W+ +++   Q+G+ D  LK++  M  +G  P+EF   
Sbjct: 255 AKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFV 314

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
            V+  C  +GA+  G  +H + LK+  E   +V  ++++ YAK   +  A + F  +   
Sbjct: 315 GVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEP 374

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  W +MIGGY   G   +AL++   M  EGI  ++ T  + L+ CS +A  + G+QIH
Sbjct: 375 DIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIH 434

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              ++      + I +AL  MY K   +     VF RM  +DVISWN +  G S+N    
Sbjct: 435 ARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGK 494

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +   LF +  L G++P++VTF  +L  C  +
Sbjct: 495 EALELFEEMQLEGTKPDYVTFVNILSACSHM 525


>gi|357149296|ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 191/716 (26%), Positives = 339/716 (47%), Gaps = 36/716 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           LR D    + +L     + S+  G Q+H    K+G+   D+F+ N L+ MY+ C   G  
Sbjct: 102 LRPDGFVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCA 161

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VF+ +A  +LVSWT ++S   +NG     + ++V+M   G   + F +   ++   S+
Sbjct: 162 EKVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSL 221

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G+ +HC  +K+    + F+   ++ FY K  ++   ++VF  +   D+   N +I
Sbjct: 222 ANLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGKSSELHLMQKVFDDMDDKDLVSSNTVI 281

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      +AL+   +M+FEG   D++T  + L   +    FD G +IHG +IR+ ++
Sbjct: 282 QCYADNMCDEQALSHFRAMMFEGSECDEFTLGSILHVVTRRGAFDYGMEIHGYLIRAGLD 341

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFE-RMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
               +++AL+DMY+  + +  A  V   RM     + ++ L  G             F +
Sbjct: 342 SDKHVMSALMDMYVNWATLHKAQCVLPLRM-----LRYHLLVQG------------KFDQ 384

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
           FI++ S          LR C   LDL  G  L    L      +  VTSSL+ M+ +CG 
Sbjct: 385 FIVASS----------LRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGC 434

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E +H +F    Y     W+ ++SG C N      L  F  +    V  N  T+  V+  
Sbjct: 435 LEESHLLFSTTKYPGTAEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLTA 494

Query: 458 CCRSENQQMVG--QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           C   +   +VG  +IHG  ++ G+ +   +  SLI  Y+  GQ   + +        ++ 
Sbjct: 495 CI--DLGDVVGGIEIHGNSVRNGYGTHASVVKSLISFYLREGQFHQALKLCLSLSNREI- 551

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
           SW  ++      G +   + +FH +  +G   D      IL SC  +         H ++
Sbjct: 552 SWDTLVKEFSQAGDHIGVLNLFHVIQRSGGVLDYPTACHILTSCGKLKLLCEGLQAHAYL 611

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K G  ++  ++S +ID Y+KCG +K A  AF +  +  +   + ++I+A+  +G    A
Sbjct: 612 TKRGLASKPCISSHLIDMYSKCGTVKDAFDAF-RYMSDKNASCWTSVIIAHLENGCPEIA 670

Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +++F +M      P+   F+SV+ AC+  GLV +    F SM   Y +QPS   Y  +++
Sbjct: 671 IDLFVQMLRKEKIPTSLAFLSVLKACAEVGLVSEAFQFFVSMTEVYKIQPSEAHYSHMIE 730

Query: 696 MLSRNGYLEDAKH-VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
           +L R G   +A+H +I ++P + S + +  L S  + +GN  + + A +KL  L+P
Sbjct: 731 VLGRAGMFREAEHFIISVVPSESSASAWSLLCSAAKQNGNTRIMKLAMDKLASLVP 786



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 155/634 (24%), Positives = 280/634 (44%), Gaps = 44/634 (6%)

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           Q +L+  +++ G      +VFD M    R+LV+WT I+S    +G     L + + M   
Sbjct: 41  QYSLLRAHTRAGRMEPARQVFDAMPPPARSLVAWTAIMSGYATHGPASEALVLLLRMMAW 100

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLGDVAA 198
              P+ F     ++ C ++G+  FG  +HC A K+  +  + FV   +L  YA    +  
Sbjct: 101 SLRPDGFVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGC 160

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           AE+VF  I++ D+  W +M+ GY   G   EA+ +   M+  GI  D +T   AL+  S 
Sbjct: 161 AEKVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASS 220

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           +A+  +G Q+H  II+     S  + N LI+ Y KSS +    KVF+ M DKD++S NT+
Sbjct: 221 LANLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGKSSELHLMQKVFDDMDDKDLVSSNTV 280

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
              +++N    Q  S F   +  GS  +  T   +L    +    D G+++    +  G 
Sbjct: 281 IQCYADNMCDEQALSHFRAMMFEGSECDEFTLGSILHVVTRRGAFDYGMEIHGYLIRAGL 340

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +++V S+L+ M+     +  A  V        +  ++ L+ G       A  L++   
Sbjct: 341 DSDKHVMSALMDMYVNWATLHKAQCVLP----LRMLRYHLLVQGKFDQFIVASSLRS--- 393

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFG 497
                               C S+     G+ +H  I+K   +S  ++ SSL+  Y   G
Sbjct: 394 --------------------CASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCG 433

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            L+ S    +  +    A W A++S     G    A+ +F  +     +P+E+   ++L 
Sbjct: 434 CLEESHLLFSTTKYPGTAEWSAVISGNCLNGQFERALHLFRRMQLDHVRPNEFTYTSVLT 493

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN----- 612
           +C  +G       IH   ++ G+ T   V  ++I  Y + G        F Q+       
Sbjct: 494 ACIDLGDVVGGIEIHGNSVRNGYGTHASVVKSLISFYLREGQ-------FHQALKLCLSL 546

Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
           SN  I ++TL+  ++  G     + +F  ++ +       T   ++++C    L+ +G L
Sbjct: 547 SNREISWDTLVKEFSQAGDHIGVLNLFHVIQRSGGVLDYPTACHILTSCGKLKLLCEG-L 605

Query: 673 LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
              +  ++ G+   P     L+DM S+ G ++DA
Sbjct: 606 QAHAYLTKRGLASKPCISSHLIDMYSKCGTVKDA 639



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 146/329 (44%), Gaps = 5/329 (1%)

Query: 387 SLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
           SL+    R G +E A  VFD +    +++  W  ++SGY  +   ++ L     +    +
Sbjct: 43  SLLRAHTRAGRMEPARQVFDAMPPPARSLVAWTAIMSGYATHGPASEALVLLLRMMAWSL 102

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSF 503
             +G  F   +  C    +Q+   Q+H A  K G+     ++ + L+  Y +   L  + 
Sbjct: 103 RPDGFVFSVALRACAAIGSQRFGRQLHCAAAKMGYVGADLFVANGLLTMYASCRSLGCAE 162

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +  NG    D+ SW +M+S     G + EAV +F  +V AG + D + L   L + +++ 
Sbjct: 163 KVFNGIATPDLVSWTSMLSGYTENGCHAEAVMLFVEMVHAGIRCDAFTLSVALRAASSLA 222

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
                  +H  +IKLGF+   ++ + +I+ Y K  ++   +  FD   +  D++  NT+I
Sbjct: 223 NLSLGHQLHCCIIKLGFSNSGFLENCLIEFYGKSSELHLMQKVFDD-MDDKDLVSSNTVI 281

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             YA +    +A+  F  M     +  + T  S++   + +G  D G  +   +  + G+
Sbjct: 282 QCYADNMCDEQALSHFRAMMFEGSECDEFTLGSILHVVTRRGAFDYGMEIHGYL-IRAGL 340

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
                    L+DM      L  A+ V+ +
Sbjct: 341 DSDKHVMSALMDMYVNWATLHKAQCVLPL 369


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 289/578 (50%), Gaps = 29/578 (5%)

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEA----LNV--VSSMLFEGITMDKYTFINALQGCSL 258
           S+S+ D   WN      A  G   EA    L+V    +ML EG T+    ++  L  C  
Sbjct: 31  SVSAADKNNWNGRSIQAAQNGSTMEAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVE 90

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
                  R +HG ++++     + +  +L++ Y++      A  +F++M +K+V++W  L
Sbjct: 91  TGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTAL 150

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G++ N    +   +F + + +G  P+H T   +L  C    + DLG Q+    +    
Sbjct: 151 ITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRA 210

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV------ 432
           L   ++ +SL  M+ + G++E A   F  V  KN+ TW  ++S      C  D       
Sbjct: 211 LSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISA-----CAEDENYTELG 265

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L  F ++   GV  N  T   V+  C    +  +  Q+     K G  +   + +S +  
Sbjct: 266 LTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYL 325

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH-----------QGHNHEAVTIFHSLV 541
           Y+  G+ D +  F    + + + +W AM+S               +    +A+ +F +L 
Sbjct: 326 YLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLK 385

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            +  KPD +   +IL+ C+++ A ++ + IH   IK GF ++V V SA+++ Y KCG I+
Sbjct: 386 RSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIE 445

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A  AF +  +   ++ + ++I  Y+ HG   EA+++F+ M+ A ++P++ TFV V+SAC
Sbjct: 446 DATKAFVE-MSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSAC 504

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S+ GL +K    F  M  +Y ++P  D YGC+VDM  R G L+DA   I    F+P+  +
Sbjct: 505 SYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAI 564

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           + SL++GCR HGN EL  +A+++L+ L PK    +VLL
Sbjct: 565 WSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLL 602



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 130/505 (25%), Positives = 244/505 (48%), Gaps = 21/505 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HGH+VK G + D+F+  +L+  Y +CG       +FD+M E+N+V+WT +++    N +
Sbjct: 100 LHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQ 159

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L+++V+M   G  P+ + +G+++  C +   ++ G  +H + +K R      +G S
Sbjct: 160 LLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNS 219

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-GYGFEALNVVSSMLFEGITM 244
           +   YAK G + +A R F  +   +V  W  MI   A    Y    L +   ML +G+  
Sbjct: 220 LCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLP 279

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  + +  C    D ++G+Q+     +   + +I + N+ + +Y++    D A + F
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFF 339

Query: 305 ERMADKDVISWNTLFGGFSE----------NKNPG-QTASLFHKFILSGSRPNHVTFSIL 353
           E M D  +I+WN +  G+++           ++ G Q   +F     S  +P+  TFS +
Sbjct: 340 EEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSI 399

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  ++ L+ G Q+    +  GFL +  V S+L+ M+ +CG +E A   F  +S + +
Sbjct: 400 LSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTL 459

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR---SENQQMVGQI 470
            TW  ++SGY  +    + ++ F ++  +GV  N  TF  V+  C     +E  +    +
Sbjct: 460 VTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDM 519

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSALVHQG 528
                K       Y C  ++  +V  G+LD++F F    G E  + A W ++++     G
Sbjct: 520 MKEEYKIEPIVDHYGC--MVDMFVRLGRLDDAFAFIRRTGFEP-NEAIWSSLVAGCRSHG 576

Query: 529 HNHEAVTIFHSLVEAGEKPDE-YIL 552
           +   A      L+E   K  E Y+L
Sbjct: 577 NMELAFYAADRLIELRPKGIETYVL 601



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 239/516 (46%), Gaps = 23/516 (4%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++ VCV  G+     ++H   +K     + FV  S++N Y + G    A  +F  +   +
Sbjct: 84  LLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKN 143

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A+I GY       EAL V   ML  G     YT    L  CS   + D+G Q+HG
Sbjct: 144 VVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHG 203

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I+       SI N+L  MY KS  ++ A + F  + DK+VI+W T+    +E++N  +
Sbjct: 204 YTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTE 263

Query: 331 TA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
              +LF   ++ G  PN  T + ++  CG  LDL+LG Q+Q      G      V +S +
Sbjct: 264 LGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTM 323

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADV---------LKTFCN 438
           Y++ R G  + A   F+ +   +I TWN ++SGY         D+         LK F N
Sbjct: 324 YLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRN 383

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +  S ++ +  TF  ++  C      +   QIH   IKTGF S   + S+L+  Y   G 
Sbjct: 384 LKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           ++++ +         + +W +M+S     G   EA+ +F  +  AG +P+E     +L++
Sbjct: 444 IEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSA 503

Query: 559 CAAIGAYQRTKSIHPF-VIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAF--DQSFNS 613
           C+  G  +  K+ H F ++K  +  E  V     ++D + + G +  A  AF     F  
Sbjct: 504 CSYAGLAE--KAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDA-FAFIRRTGFEP 560

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           N+ I +++L+     HG +  A    D  +L  L+P
Sbjct: 561 NEAI-WSSLVAGCRSHGNMELAFYAAD--RLIELRP 593



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 12/308 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG+QVHG+ +K    +   + N+L  MY+K G     +R F  + ++N+++WT ++SA  
Sbjct: 197 LGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACA 256

Query: 122 QNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++  + ++GL +++DM  +G +PNEF + SVM +C +      G  +  F  KI  + N 
Sbjct: 257 EDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNI 316

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFE 229
            V  S +  Y + G+   A R F  +    +  WNAMI GYA               GF+
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQ 376

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL V  ++    +  D +TF + L  CS +   + G QIH   I++     + + +AL++
Sbjct: 377 ALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVN 436

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ A K F  M+ + +++W ++  G+S++  P +   LF     +G RPN +T
Sbjct: 437 MYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEIT 496

Query: 350 FSILLRQC 357
           F  +L  C
Sbjct: 497 FVCVLSAC 504



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 82/161 (50%), Gaps = 7/161 (4%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+  ++ +   G Q+H   +K GF +D+ + + L+ MY+KCG    
Sbjct: 387 SAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIED 446

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM+ R LV+WT ++S   Q+G     ++++ DM+  G  PNE     V+  C  
Sbjct: 447 ATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSY 506

Query: 158 MGASEFGYSIHCF-ALKIRIEKNPFV---GCSVLNFYAKLG 194
            G +E   + H F  +K   +  P V   GC V + + +LG
Sbjct: 507 AGLAE--KAEHYFDMMKEEYKIEPIVDHYGCMV-DMFVRLG 544


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 272/531 (51%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ LI+  + S    G+ YA  VF+ + + +++ WNT+F G 
Sbjct: 19  RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C K      G Q+    L  G   + 
Sbjct: 79  ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDL 138

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSY-------------------------------K 411
            V +SLI M+ + G  E A  VFD  S+                               K
Sbjct: 139 YVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVK 198

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN L+SGY       + L+ F  + ++ V+ +  T   V+  C +S + ++  Q+H
Sbjct: 199 DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVH 258

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF S   I ++LI  Y+  G+++ +     G    D+ SW  ++    H     
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P+E  + +IL +CA +GA    + IH ++ K   G +    + ++
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A+  FD   N + +  +N +I  +A HG  + A +IF +M+   ++P
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRS-LSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEP 437

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L  +G  ++A+ +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M   P   ++ SLL  C++HGN ELGE  ++ L+ + PKN  ++VLLS
Sbjct: 498 INSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLS 548



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 250/565 (44%), Gaps = 69/565 (12%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMA 106
           SLSL  N K+      +H  ++K G  N  +  + LI       +F    + + VFD + 
Sbjct: 5   SLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E NL+ W  +      + +    L +YV M + G +PN +    ++K C    A   G  
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQ 124

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGD------------------------------- 195
           IH   LK+  + + +V  S++  Y K G                                
Sbjct: 125 IHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGY 184

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + +A+++F  I   DV  WNA+I GYA  G   EAL +   M+   +  D+ T +  L  
Sbjct: 185 IXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSA 244

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+  A  ++GRQ+H  I       ++ IVNALID+YIK   ++ A  +FE ++ KDVISW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISW 304

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--A 373
           NTL GG++      +   LF + + SG  PN VT   +L  C  L  +D+G  +      
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDK 364

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G  +  ++ +SLI M+ +CG +E A  VFD++  +++++WN ++ G+  +       
Sbjct: 365 RLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAF 424

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             F  + + G+E +  TF  ++  C            H  ++  G     +I  S+ + Y
Sbjct: 425 DIFSRMRKDGIEPDDITFVGLLSACS-----------HSGMLDLG----RHIFRSMTEDY 469

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
               +L++               +G M+  L H G   EA  + +S+      PD  I  
Sbjct: 470 KITPKLEH---------------YGCMIDLLGHSGLFKEAEEMINSM---EMDPDGVIWC 511

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKL 578
           ++L +C   G  +  +S    +IK+
Sbjct: 512 SLLKACKMHGNVELGESFAQNLIKI 536



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 119/231 (51%), Gaps = 2/231 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   +   LS      S  LG QVH  I   GF +++ + N LI +Y KCG      
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ ++ ++++SW  ++        +   L ++ +M  +G  PNE  + S++  C  +G
Sbjct: 291 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLG 350

Query: 160 ASEFGYSIHCFALK-IRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K ++   NP  +  S+++ YAK GD+ AA++VF S+ +  +  WNAM
Sbjct: 351 AIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           I G+A  G    A ++ S M  +GI  D  TF+  L  CS     D+GR I
Sbjct: 411 IFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461


>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
          Length = 591

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/526 (30%), Positives = 265/526 (50%), Gaps = 19/526 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVE---CS--------ISIVNALIDMYIKSSGM 297
           F   L  C    D  +G  +H  ++++      C+        +   N+L+ MY +    
Sbjct: 14  FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRR 73

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQ 356
           + A +VF+ M  +D +SWN+L      ++  G   +LF + + S +R  +  TF+ +L +
Sbjct: 74  EDAARVFDEMRVRDAVSWNSLIAA---SRGAGDALALFRRMLRSDARACDRATFTTVLSE 130

Query: 357 CGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           C +     L     +  L + CGF  E  V ++L+  +  CG+   A  VF  ++ KN+ 
Sbjct: 131 CARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVI 190

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TW  ++SG        +    F  +  + V+ N  T+   +  C RS   +   Q+HG +
Sbjct: 191 TWTAMISGMARAELYKESFSLFGQMIRT-VDANNATYSCALLACARSLAAREGQQVHGLV 249

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K GF    ++ S L+  Y   G ++++          D      ++      G   +A 
Sbjct: 250 VKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAF 309

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  +V AG + DE  +  +L +  A   +   K IH  VIK  F    YV + +++ Y
Sbjct: 310 ELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMY 369

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           +KCG+++ +   FD+   S + + +N++I A+A HG  SE  ++F+ MK    +P+  TF
Sbjct: 370 SKCGELRESVRVFDE-MPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTF 428

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           +S++ ACSH G   KG  +  SM SQYG+ P  + Y C+VDML R G L+DAK  IE  P
Sbjct: 429 LSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGP 488

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           F  +  ++++L+  C  HGN E+G++A+EKLLLL P   AA+VLLS
Sbjct: 489 FTDNALLWQALMGACSFHGNSEVGKYAAEKLLLLDPSCTAAYVLLS 534



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 183/379 (48%), Gaps = 7/379 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGF 141
           N+L++MY++CG      RVFDEM  R+ VSW  +++A+   G+    L ++  M +++  
Sbjct: 61  NSLVSMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDAR 117

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
             +     +V+  C   GA+       +H   +    E    VG +++  Y + G  A+A
Sbjct: 118 ACDRATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNALVTAYFECGSPASA 177

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ERVF+ ++  +V  W AMI G A      E+ ++   M+   +  +  T+  AL  C+  
Sbjct: 178 ERVFHGMAEKNVITWTAMISGMARAELYKESFSLFGQMI-RTVDANNATYSCALLACARS 236

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
                G+Q+HGL++++  E  + + + L+D+Y K   M+ A  VF    + D +    + 
Sbjct: 237 LAAREGQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDEVFLTVIL 296

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF++N    +   LF + + +G+  +  T S +L   G      LG Q+  L +   F 
Sbjct: 297 VGFAQNGLEEKAFELFAEMVGAGNEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFG 356

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               V + L+ M+ +CG +  +  VFD +  KN  +WN +++ +  +   ++V + F ++
Sbjct: 357 VNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESM 416

Query: 440 WESGVEVNGCTFFYVVETC 458
              G +    TF  ++  C
Sbjct: 417 KADGAKPTDVTFLSLLHAC 435



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 163/363 (44%), Gaps = 3/363 (0%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG +V  GF  ++ + N L+  Y +CG      RVF  MAE+N+++WT ++S   +   
Sbjct: 145 VHGLVVSCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAEL 204

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           +     ++  M       N       +  C    A+  G  +H   +K   E +  V   
Sbjct: 205 YKESFSLFGQM-IRTVDANNATYSCALLACARSLAAREGQQVHGLVVKAGFEDDLHVESG 263

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K G +  A  VF S    D      ++ G+A  G   +A  + + M+  G  +D
Sbjct: 264 LMDVYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEID 323

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T    L      A F +G+QIH L+I+     +  + N L++MY K   +  + +VF+
Sbjct: 324 ENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFD 383

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  K+ +SWN++   F+ + +  +   LF      G++P  VTF  LL  C  +     
Sbjct: 384 EMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKK 443

Query: 366 GLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGY 423
           GL+ L  ++   G L      + ++ M  R G ++ A S  ++  +  N   W  L+   
Sbjct: 444 GLEILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGAC 503

Query: 424 CFN 426
            F+
Sbjct: 504 SFH 506



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 23/296 (7%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+ + +L +R  G QVHG +VK GF +D+ +++ L+ +YSKCG     L VF    E + 
Sbjct: 231 LACARSLAARE-GQQVHGLVVKAGFEDDLHVESGLMDVYSKCGLMEDALTVFRSCREPDE 289

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS---EFGYSI 167
           V  T+I+    QNG  +   +++ +M   G   NE    +V  V  + GAS     G  I
Sbjct: 290 VFLTVILVGFAQNGLEEKAFELFAEMVGAG---NEIDENTVSAVLGAFGASAPFALGKQI 346

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   +K     N +V   ++N Y+K G++  + RVF  + S +   WN++I  +A  G+G
Sbjct: 347 HALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHGHG 406

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-------HGLIIRSEVECS 280
            E   +  SM  +G      TF++ L  CS V     G +I       +G++ R E    
Sbjct: 407 SEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILNSMSSQYGVLPRMEHYAC 466

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKD-VISWNTLFGG--FSENKNPGQTAS 333
           +      +DM  ++  +D A    E     D  + W  L G   F  N   G+ A+
Sbjct: 467 V------VDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEVGKYAA 516


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/619 (26%), Positives = 297/619 (47%), Gaps = 2/619 (0%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+     ++++ C S    + G  +H        E+N  V   ++  YA+ G V  A++V
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   DV  W  MIG Y   G    AL +   M  E +   K T++  L  C+     
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
             G +IHG I++   E  + +  ALI+MY K   +  A+  F+R+  +DV+SW  +    
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAAC 181

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            ++        L+ +  L G  PN +T   +    G    L  G  +  L        + 
Sbjct: 182 VQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDV 241

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V +S + MF   G +  A  +F+++  +++ TWN +++ Y  N    + ++ F  + + 
Sbjct: 242 RVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQD 301

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           GV+ N  TF  ++       +      IH  + + G+     + ++L+  Y        +
Sbjct: 302 GVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQA 361

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
           ++        D+ +W  M  A    G   EA+ +F  +   G +P    L  +L++CA +
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            A Q+ + IH  +I+  F  E+ V +A+I+ Y KCG +  A   F++     D++V+N++
Sbjct: 422 AALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEK-MAKRDILVWNSM 480

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           + AYA HG   E +++F++M+L  ++    +FVSV+SA SH G V  G   F +M   + 
Sbjct: 481 LGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFS 540

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKH-VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           + P+P+ YGC+VD+L R G +++A   V+++    P   ++ +LL  CR H   +  + A
Sbjct: 541 ITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAA 600

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +E++L   P +  A+V+LS
Sbjct: 601 AEQVLERDPSHSGAYVVLS 619



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 270/602 (44%), Gaps = 12/602 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D  F    L    + K+   G +VH H+   GF  +  +  +LI MY++CG      +
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+ +  +++ +WT ++    Q G++D  L M+  M+    MP +    +++  C S  +
Sbjct: 61  VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  IH   L+   E + FVG +++N Y K G V  A   F  +   DV  W AMI  
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
                    A  +   M  +G+  +K   YT  NA    + +++   G+ ++GL+    +
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSE---GKFVYGLVSSGVM 237

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E  + ++N+ ++M+  +  +  A ++FE M D+DV++WN +   + +N+N G+   LF +
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGR 297

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G + N +TF ++L     L  L  G  +  L    G+  +  V ++L+ ++ RC A
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
              A  +F ++  K++ TW  +   Y  N    + L+ F  +   G      T   V++T
Sbjct: 358 PGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDT 417

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C      Q   QIH  II+  F     + ++LI  Y   G++  +        + D+  W
Sbjct: 418 CAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVW 477

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
            +M+ A    G+  E + +F+ +   G K D     ++L++ +  G+   T     FV  
Sbjct: 478 NSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSV--TDGYQYFVAM 535

Query: 578 L---GFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           L          +   V+D   + G I+ A  +    S    D I++ TL+ A   H    
Sbjct: 536 LQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTD 595

Query: 634 EA 635
           +A
Sbjct: 596 QA 597



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 139/297 (46%), Gaps = 3/297 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + I     L++  +L S   G  +H  + + G+  D  +   L+++Y +C   G   
Sbjct: 303 VKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAW 362

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F +M  +++++WT++  A  QNG     L+++ +M+  G  P    + +V+  C  + 
Sbjct: 363 KIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLA 422

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A + G  IH   ++ R      V  +++N Y K G +A A  VF  ++  D+  WN+M+G
Sbjct: 423 ALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLG 482

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
            YA  GY  E L + + M  +G+  D  +F++ L   S       G Q    +++   + 
Sbjct: 483 AYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSIT 542

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTAS 333
            +  +   ++D+  ++  +  A  +  +++    D I W TL G    +    Q  +
Sbjct: 543 PTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKA 599


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 259/504 (51%), Gaps = 42/504 (8%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+ YA  VFE + + +++ WNT+  G + + +P     ++ + +  G  PN  +F  LL+
Sbjct: 13  GLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLK 72

Query: 356 QCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVE-------------- 399
            C K    + G Q+  Q L L CG   +  V +SLI M+ R G +E              
Sbjct: 73  SCAKSKAFEEGRQIHAQVLKLGCGL--DRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130

Query: 400 -----------------MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
                             A  VFD ++ +++ +WN +++GY  N    + L+ F  +  +
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT----GFSSCGYICSSLIKSYVNFGQ 498
            V  +  T   VV  C +S + ++  Q+H  +       GFSS   I ++LI  Y   G 
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           ++ +F    G    D+ SW  ++    H     EA+ +F  ++ +GE P++  L ++L +
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310

Query: 559 CAAIGAYQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           CA +GA    + IH ++ K   G   E  + +++ID YAKCGDI+ A   F+ S     +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFN-SMLYRSL 369

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
             +N +I  +A HG  + A ++F +M+   ++P   TFV ++SACSH GL+D G  +FKS
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M   Y + P  + YGC++D+L  +G  ++A+ +I  MP +P   ++ SLL  C+ HGN E
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLE 489

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           L E  ++KL+ + P+N  ++VLLS
Sbjct: 490 LAESFAQKLIKIEPENSGSYVLLS 513



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 237/519 (45%), Gaps = 70/519 (13%)

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           + + VF+ + E NL+ W  ++     + +    L+MYV M + G +PN ++   ++K C 
Sbjct: 16  YAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCA 75

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK------------------------ 192
              A E G  IH   LK+    + +V  S+++ YA+                        
Sbjct: 76  KSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTA 135

Query: 193 -------LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
                   GD  +A +VF  I+  DV  WNAMI GY   G   EAL +   M+   +  D
Sbjct: 136 LITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPD 195

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEV----ECSISIVNALIDMYIKSSGMDYAF 301
           + T ++ +  C+     ++GRQ+H  +   +       S+ IVNALID+Y K   ++ AF
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +FE ++ KDV+SWNTL GG++      +   LF + + SG  PN VT   +L  C  L 
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLG 315

Query: 362 DLDLGLQLQCLALH--CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            +D+G  +         G  +E ++ +SLI M+ +CG +E AH VF+++ Y+++++WN +
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAM 375

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           + G+  +         F  +  + VE +  TF  ++  C            H  ++  G 
Sbjct: 376 IFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACS-----------HSGLLDLGR 424

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                I  S+ + Y    +L++               +G M+  L H G   EA  + H+
Sbjct: 425 Q----IFKSMTQDYNLTPKLEH---------------YGCMIDLLGHSGLFKEAEEMIHT 465

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +     +PD  I  ++L +C   G  +  +S    +IK+
Sbjct: 466 M---PMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKI 501



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 167/361 (46%), Gaps = 40/361 (11%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-------------- 91
           FL KS + S+  +    G Q+H  ++KLG   D ++  +LI+MY++              
Sbjct: 69  FLLKSCAKSKAFEE---GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDAS 125

Query: 92  ------------CGY-----FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                        GY     F    +VFDE+ ER++VSW  +++  ++NG ++  L+++ 
Sbjct: 126 SHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFK 185

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN----FY 190
           +M      P+E  + SV+  C   G+ E G  +H +      +        ++N     Y
Sbjct: 186 EMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLY 245

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           +K GDV  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G   +  T +
Sbjct: 246 SKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLL 305

Query: 251 NALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + L  C+ +   DIGR IH  I +    V    S+  +LIDMY K   ++ A +VF  M 
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            + + SWN +  GF+ +        LF +   +   P+ +TF  LL  C     LDLG Q
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425

Query: 369 L 369
           +
Sbjct: 426 I 426



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 8/308 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL----GFTNDIFLQNNLIAMYSKCGYF 95
           +R D   L   +S      S  LG QVH  +       GF++ + + N LI +YSKCG  
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                +F+ ++ +++VSW  ++        +   L ++ +M  +G  PN+  + SV+  C
Sbjct: 252 ETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPAC 311

Query: 156 VSMGASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
             +GA + G  IH +  K    +     +  S+++ YAK GD+ AA +VF S+    +  
Sbjct: 312 AHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSS 371

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WNAMI G+A  G    A ++ S M    +  D  TF+  L  CS     D+GRQI   + 
Sbjct: 372 WNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMT 431

Query: 274 RS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQT 331
           +   +   +     +ID+   S     A ++   M  + D + W +L     ++ N    
Sbjct: 432 QDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA 491

Query: 332 ASLFHKFI 339
            S   K I
Sbjct: 492 ESFAQKLI 499


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/624 (27%), Positives = 313/624 (50%), Gaps = 12/624 (1%)

Query: 164 GYSIHCFALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           G  +H  AL+   +  + F G +++ FYA  G  A A RVF  + + D+  WN+++    
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALL 189

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   +A   V  M+  GI ++  + ++ +  C    D   G  +HGL+++S ++  ++
Sbjct: 190 TNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVN 249

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+DMY K   ++ + +VF  M +K+ +SWN+  G F+          +F       
Sbjct: 250 LGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHE 309

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P  VT S LL     L    LG ++   ++      +  + +SL+ M+ + G +E A 
Sbjct: 310 VTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKAS 369

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           ++F+N+  +N+ +WN +++    N  + +       + ++G   N  T   ++  C R  
Sbjct: 370 AIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVA 429

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           + +M  QIH   I     S  ++ ++LI  Y   GQL  + +  + +E+ D+ S+  ++ 
Sbjct: 430 SVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLIV 488

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
                    E++ +F  +  AG + D       L++CA + A+++ K IH  +++   NT
Sbjct: 489 GYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNT 548

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             ++A++++D Y K G +  A   F++     DV  +NT+I+ Y  HG +  A E+FD M
Sbjct: 549 HPFLANSLLDLYTKGGMLATASKIFNR-ITRKDVASWNTMILGYGMHGQIDVAFELFDLM 607

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           K   +     ++++V+SACSH GLVD+G   F  M +Q  ++P    Y C+VD+L R G 
Sbjct: 608 KDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQ 666

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKR 762
           L ++  +I  MPF  +  V+ +LL  CRIHG+ EL   A+E L  L P++   + LL   
Sbjct: 667 LSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLR-- 724

Query: 763 KRQREGNLLDHEGVCNVNDGIKTV 786
                 N+    G+ N  + IKT+
Sbjct: 725 ------NMYSESGMWNEANEIKTL 742



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 161/625 (25%), Positives = 287/625 (45%), Gaps = 36/625 (5%)

Query: 63  GTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G ++H   ++ G    D+F  N L+  Y+  G      RVFDEM  R++VSW  +VSA +
Sbjct: 130 GAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALL 189

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG  +   +  V M  +G   N  ++ SV+  C +     FG S+H   LK  ++    
Sbjct: 190 TNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVN 249

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G ++++ Y K GD+ ++ RVF  +   +   WN+ +G +AH G+  + L +   M    
Sbjct: 250 LGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHE 309

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +T    T  + L     +  F +G+++HG  IR  +E  I I N+L+DMY K   ++ A 
Sbjct: 310 VTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKAS 369

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +FE +  ++V+SWN +    ++N    +  SL  +   +G  PN  T   LL  C ++ 
Sbjct: 370 AIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVA 429

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            + +G Q+   ++H   + +  V+++LI ++ +CG + +A  +FD  S K+  ++N L+ 
Sbjct: 430 SVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIV 488

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY  + C  + L  F  +  +G+E +  +F   +  C      +   +IHG +++   ++
Sbjct: 489 GYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNT 548

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SL+  Y   G L  + +  N   R D+ASW  M+      G    A  +F  + 
Sbjct: 549 HPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMK 608

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTK---------SIHP------------------- 573
           + G   D      +L++C+  G   R K         +I P                   
Sbjct: 609 DDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLS 668

Query: 574 ----FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF--NSNDVIVYNTLIMAYA 627
                +  + F     V  A++ +    GDI+ AR+A +  F         Y  L   Y+
Sbjct: 669 ESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYS 728

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQA 652
             G+ +EA EI   MK   +Q + A
Sbjct: 729 ESGMWNEANEIKTLMKSRKVQKNPA 753



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 184/364 (50%), Gaps = 3/364 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG +VHG+ ++    +DIF+ N+L+ MY+K G       +F+ +  RN+VSW  +++   
Sbjct: 332 LGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLA 391

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG       + ++M+ NG  PN F + +++  C  + + + G  IH +++   +  + F
Sbjct: 392 QNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLF 451

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G ++ A+ +F     DDV  +N +I GY+     FE+L++   M   G
Sbjct: 452 VSNALIDVYAKCGQLSVAQDIFDRSEKDDV-SYNTLIVGYSQSQCCFESLHLFQQMRSAG 510

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  +F+  L  C+ ++ F  G++IHG+++R  +     + N+L+D+Y K   +  A 
Sbjct: 511 IEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATAS 570

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F R+  KDV SWNT+  G+  +        LF      G   +HV++  +L  C    
Sbjct: 571 KIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGG 630

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
            +D G +     +      ++   + ++ +  R G +  +  +  N+ +  N   W  LL
Sbjct: 631 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALL 690

Query: 421 SGYC 424
            G C
Sbjct: 691 -GSC 693



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 14/293 (4%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N  C +SF       L   L     + S  +G Q+H   +     +D+F+ N LI +Y+K
Sbjct: 409 NGECPNSFT------LVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAK 462

Query: 92  CGYFGWGLRVFDEMAERNLVSW-TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           CG       +FD  +E++ VS+ TLIV  +     F+  L ++  M++ G   +  +   
Sbjct: 463 CGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFE-SLHLFQQMRSAGIEYDAVSFMG 520

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +  C ++ A + G  IH   ++  +  +PF+  S+L+ Y K G +A A ++F  I+  D
Sbjct: 521 CLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKD 580

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN MI GY   G    A  +   M  +G+  D  ++I  L  CS     D G++   
Sbjct: 581 VASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFS 640

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFG 320
            +I   ++        ++D+  ++  +  + ++   M   A+ DV  W  L G
Sbjct: 641 QMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDV--WGALLG 691


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 168/599 (28%), Positives = 306/599 (51%), Gaps = 18/599 (3%)

Query: 173 KIRIEKNPFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           + R+E    V  C  L+   K G +  A  +F  +   ++  W + + G    G    A+
Sbjct: 19  RRRVEPPEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAM 78

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
              + M+  G+  + + F  AL  C+  +    G Q+H L +R+       + ++L+++Y
Sbjct: 79  AAFADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELY 138

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            +   +  A  VF+RM   DV+ + +L   F  +          H+ +  G  PN  T +
Sbjct: 139 SRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMA 198

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV--TSSLIYMFCRCGAVEMAHSVFDNVS 409
            +L  C   +   LG Q+    +    L  +++  +S+LI  + R    +MA +VF+N+ 
Sbjct: 199 SILGSCCPFV---LGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLH 255

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVG 468
            KN+ TW  ++  +  +    D L+ F ++   GV E N   F   +  C    +  +  
Sbjct: 256 CKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACG---SIALGR 312

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           Q+H + IK   +S   + ++L+  Y     +          E  D+ SW   +SA    G
Sbjct: 313 QLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNG 372

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
            + +A+ +   L   G  P++Y   + L+SCA +    + +  H   +KLG + ++   +
Sbjct: 373 FSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGN 432

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK-LANL 647
           A+I+ Y+KCG I  A++AFD   +  DV  +N+LI  YA HG  S A+++F +M+ +   
Sbjct: 433 ALINLYSKCGQIAPAKLAFD-VMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGT 491

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSM--DSQYGMQPSPDCYGCLVDMLSRNGYLED 705
           +P +++F+ V++AC+H G+V++G  LF+++   SQ+G  PSP  Y C+VDM+ R+G  +D
Sbjct: 492 EPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDD 551

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP----KNDAAHVLLS 760
           A  ++E MPF+P   ++++LL+ CR+HGN E GE A+E+L+ L      ++ A++VL+S
Sbjct: 552 ALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMS 610



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 194/400 (48%), Gaps = 10/400 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ ++L+ +YS+CG  G    VFD M   ++V +T +VSA  +
Sbjct: 112 GEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCR 171

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS--MGASEFGYSIHCFALKIRIEKNP 180
           +GEF++ +     M   G  PNE  + S++  C    +G     Y I    L     ++ 
Sbjct: 172 SGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFVLGEQVHAYMIKAMGLH---SQSM 228

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +   ++++FY++  +   A+ VF ++   +V  W +M+  +   G   +AL V   M+ E
Sbjct: 229 YASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISE 288

Query: 241 GIT-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           G+   +++ F  AL  C  +A   +GRQ+H   I+  +   + + NAL+ MY +   +  
Sbjct: 289 GVVEPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQE 345

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
              V + + + D++SW T      +N    +  +L       G  PN   FS  L  C  
Sbjct: 346 LEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCAD 405

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  LD G Q  CLAL  G   +    ++LI ++ +CG +  A   FD + ++++T+WN L
Sbjct: 406 LALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSL 465

Query: 420 LSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETC 458
           + GY  +   +  L+ F  +    G E +  +F  V+  C
Sbjct: 466 IHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAAC 505



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 135/551 (24%), Positives = 241/551 (43%), Gaps = 21/551 (3%)

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           K G  G  L +FD M  +N+V+WT  VS   +NG  +  +  + DM  +G  PN+FA  +
Sbjct: 39  KSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNA 98

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +  C    A   G  +H  A++     + +VG S++  Y++ GD+ AA+ VF  + S D
Sbjct: 99  ALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPD 158

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + +++  +   G    A++ +  ML +G+  +++T  + L  C     F +G Q+H 
Sbjct: 159 VVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSC---CPFVLGEQVHA 215

Query: 271 LIIRSEVECSISIV--NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
            +I++    S S+   +ALID Y ++S  D A  VF  +  K+V++W ++      +  P
Sbjct: 216 YMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRP 275

Query: 329 GQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                +F   I  G   PN   FSI L  CG +    LG QL   A+      +  V+++
Sbjct: 276 EDALQVFDDMISEGVVEPNEFAFSIALGACGSIA---LGRQLHSSAIKRNLTSDLRVSNA 332

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ R   V+   +V  ++   +I +W   +S    N      +     +   G+  N
Sbjct: 333 LLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPN 392

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICS--SLIKSYVNFGQLDNSFE 504
              F   + +C          Q H   +K G   C   IC+  +LI  Y   GQ+  +  
Sbjct: 393 DYAFSSALSSCADLALLDQGRQFHCLALKLG---CDLKICTGNALINLYSKCGQIAPAKL 449

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIG 563
             +  +  D+ SW +++      G    A+ +F  +    G +PDE     +L +C   G
Sbjct: 450 AFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAG 509

Query: 564 AYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVY 619
                 ++   +    + G        + V+D   + G    A R+  +  F     +++
Sbjct: 510 MVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPG-ALIW 568

Query: 620 NTLIMAYAHHG 630
            TL+ +   HG
Sbjct: 569 KTLLASCRLHG 579



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 181/369 (49%), Gaps = 11/369 (2%)

Query: 61  VLGTQVHGHIVK-LGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           VLG QVH +++K +G  +  ++  + LI  YS+   F     VF+ +  +N+V+W  ++ 
Sbjct: 208 VLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQ 267

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
             I++G  +  L+++ DM + G + PNEFA    +  C   G+   G  +H  A+K  + 
Sbjct: 268 LHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKRNLT 324

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  V  ++L+ Y ++  V   E V   I + D+  W   I      G+  +A+ ++S +
Sbjct: 325 SDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSML 384

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  + Y F +AL  C+ +A  D GRQ H L ++   +  I   NALI++Y K   +
Sbjct: 385 HSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQI 444

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF-ILSGSRPNHVTFSILLRQ 356
             A   F+ M  +DV SWN+L  G++++ +      +F +   + G+ P+  +F  +L  
Sbjct: 445 APAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAA 504

Query: 357 CGKLLDLDLGLQL-QCLALHC--GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-N 412
           C     ++ G+ L + +A H   G     +  + ++ M  R G  + A  + + + ++  
Sbjct: 505 CNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPG 564

Query: 413 ITTWNELLS 421
              W  LL+
Sbjct: 565 ALIWKTLLA 573



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 5/267 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           S  LG Q+H   +K   T+D+ + N L++MY +  +      V  ++   ++VSWT  +S
Sbjct: 307 SIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAIS 366

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           A  QNG  +  + +   + + G MPN++A  S +  C  +   + G   HC ALK+  + 
Sbjct: 367 ANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDL 426

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
               G +++N Y+K G +A A+  F  +   DV  WN++I GYA  G    AL V   M 
Sbjct: 427 KICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMR 486

Query: 239 -FEGITMDKYTFINALQGCSLVADFDIGRQIHGLII---RSEVECSISIVNALIDMYIKS 294
              G   D+ +F+  L  C+     + G  +   I    +     S S    ++DM  +S
Sbjct: 487 SIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRS 546

Query: 295 SGMDYAFKVFERMADKD-VISWNTLFG 320
              D A ++ E M  +   + W TL  
Sbjct: 547 GRFDDALRLVEEMPFRPGALIWKTLLA 573


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 277/518 (53%), Gaps = 3/518 (0%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           ++      L+ CS    FD G Q+H   +       + + N LIDMY K S +D A  VF
Sbjct: 3   ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           +RM +++V+SW  L  G+ +  N   + +L  +   SG +PN  TFS  L+ CG L  ++
Sbjct: 63  DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G+Q+  + +  GF     V ++ I M+ +CG + MA  VF+ + ++N+ +WN +++G+ 
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--SSC 482
                   L  F  +   G   +  TF   ++ C      +   QIH ++I  GF  S  
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIR 242

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             I S+++  Y   G L  + +  +  E+ ++ SW A++     +G+  EA+ +F  L E
Sbjct: 243 NIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRE 302

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
           +    D ++L  ++   A +   ++ K +H +++K+    ++ VA+++ID Y KCG  + 
Sbjct: 303 SVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEE 362

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F +     +V+ +  +I  Y  HGL  +A+ +F++M+L  ++  +  +++++SACS
Sbjct: 363 AERLFSE-MQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS 421

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+ +    F  + + + M+P+ + Y C+VD+L R G L++AK++IE M  +P+  ++
Sbjct: 422 HSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIW 481

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++LLS CR+HGN E+G    E L  +   N   +V++S
Sbjct: 482 QTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMS 519



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 253/539 (46%), Gaps = 38/539 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V +GF  D+ + N+LI MY KC        VFD M ERN+VSWT ++   +Q
Sbjct: 23  GLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQ 82

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G     L +  +M  +G  PNEF   + +K C ++G  E G  IH   +K   E    V
Sbjct: 83  EGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVV 142

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G + ++ Y+K G +  AE+VF  +   ++  WNAMI G+ H G G ++L +   M  +G 
Sbjct: 143 GNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGE 202

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYA 300
             D++TF + L+ C  +     G QIH  +I      SI   I +A++D+Y K   +  A
Sbjct: 203 VPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEA 262

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF+R+  K++ISW+ L  GF++  N  +   LF +   S S  +    SI++     L
Sbjct: 263 QKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADL 322

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++ G Q+ C  L      + +V +S+I M+ +CG  E A  +F  +  +N+ +W  ++
Sbjct: 323 ALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMI 382

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY  +      +  F  +   G+E++   +  ++  C            H  +I+    
Sbjct: 383 TGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS-----------HSGLIR---- 427

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
                     +S   F +L N+ +     E      +  M+  L   G   EA  +  ++
Sbjct: 428 ----------ESQEYFSRLCNNHQMKPNIEH-----YACMVDILGRAGQLKEAKNLIENM 472

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV-YVASAVIDAYAKCG 598
                KP+E I  T+L++C   G  +  + +   + ++  +  V YV  + I  YA+ G
Sbjct: 473 ---KLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNI--YAEAG 526



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/513 (22%), Positives = 233/513 (45%), Gaps = 10/513 (1%)

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
           M     +  +++ C   G  + G  +H  A+ +    +  +   +++ Y K   V  A  
Sbjct: 1   MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACS 60

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           VF  +   +V  W A++ GY   G    +L ++  M + G+  +++TF  +L+ C  +  
Sbjct: 61  VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV 120

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            + G QIHG+ ++S  E    + NA IDMY K   +  A +VF +M  ++++SWN +  G
Sbjct: 121 VENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAG 180

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LD 380
            +   N  ++  LF +    G  P+  TF+  L+ CG L  +  G Q+    +  GF + 
Sbjct: 181 HTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPIS 240

Query: 381 EEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
             N + S+++ ++ +CG +  A  VFD +  KN+ +W+ L+ G+       + +  F  +
Sbjct: 241 IRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL 300

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            ES   V+G     ++         +   Q+H  I+K        + +S+I  Y+  G  
Sbjct: 301 RESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLT 360

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           + +    +  +  ++ SW  M++     G   +A+ +F+ +   G + DE     +L++C
Sbjct: 361 EEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSAC 420

Query: 560 AAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           +  G  + ++     +    ++  N E Y  + ++D   + G +K A+   +      + 
Sbjct: 421 SHSGLIRESQEYFSRLCNNHQMKPNIEHY--ACMVDILGRAGQLKEAKNLIENMKLKPNE 478

Query: 617 IVYNTLIMAYAHHG---LVSEAMEIFDKMKLAN 646
            ++ TL+ A   HG   +  E  EI  +M   N
Sbjct: 479 GIWQTLLSACRVHGNLEIGREVGEILFRMDTDN 511


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 269/532 (50%), Gaps = 3/532 (0%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EA + +  M    +++  +++    + C  +     GR IH  + R+    S SI N L+
Sbjct: 70  EAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLL 129

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY          KVF+ M  K+++SW  +   +++N    +   LF     SG RPN  
Sbjct: 130 RMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSA 189

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
            +  LL+ C     L+LG Q+    +         V +++  M+ RCG +E A  VFD +
Sbjct: 190 VYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGM 249

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             +N  TW  L+ GY         L+ F  +   GVE++   F  V++ CC  E+  M  
Sbjct: 250 DAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGR 309

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQ 527
           QIH  I+K G  S   + + L+  YV  G +++++  F   +E  D+ SW A++S     
Sbjct: 310 QIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDV-SWSALISGFSQS 368

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   + + IF SL   G   + +I  ++  +CAA          H   IK G  + +Y  
Sbjct: 369 GRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGE 428

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA++  Y+KCG +  AR AF +S +  D + +  +I  YA+HG  +EA+  F +M+   +
Sbjct: 429 SAMVTMYSKCGRLDYARRAF-ESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P+  TF++V++ACSH GLV +      SM   YG++P+ D Y C++D  SR G L++A 
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEAL 547

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            +I  MPF+P    ++SLL GC  H + +LG+ A+E L  L P + A ++LL
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILL 599



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 227/474 (47%), Gaps = 14/474 (2%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            L+S   G  +H  + +        ++N L+ MY  CG      +VFDEM  +NLVSW +
Sbjct: 99  KLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVI 158

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++SA  +NGE +  ++++ DM+ +G  PN     S+++ C+     E G  IH   ++ +
Sbjct: 159 VISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQ 218

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  V  ++ N Y + G +  A+ VF  + + +   W  ++ GY        AL + +
Sbjct: 219 LNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFA 278

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M  EG+ +D++ F   L+ C  + D+D+GRQIH  I++   E  +S+   L+D Y+K  
Sbjct: 279 RMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCG 338

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A++ F R+++ + +SW+ L  GFS++        +F      G   N   ++ + +
Sbjct: 339 DIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQ 398

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    +L++G Q    A+  G +      S+++ M+ +CG ++ A   F+++   +   
Sbjct: 399 ACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVA 458

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI- 470
           W  ++SGY ++   A+ L  F  +   GV  N  TF  V+  C  S    E +Q +G + 
Sbjct: 459 WTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMS 518

Query: 471 --HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMM 521
             +G         C      +I +Y   G L  + E  N      D  SW +++
Sbjct: 519 RDYGVKPTIDHYDC------MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 244/542 (45%), Gaps = 40/542 (7%)

Query: 175 RIEKNPF--VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           R  KNP   +   +L  Y   G     ++VF  +   ++  W  +I  YA  G   +A+ 
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIR 174

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S M   GI  +   +++ LQ C   +  ++G+QIH  +IR+++  +I++  A+ +MY+
Sbjct: 175 LFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYV 234

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           +   ++ A  VF+ M  ++ ++W  L  G+++ K       LF +  + G   +   FSI
Sbjct: 235 RCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSI 294

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L+ C  L D D+G Q+    +  G   E +V + L+  + +CG +E A+  F  +S  N
Sbjct: 295 VLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             +W+ L+SG+  +    D +K F ++   GV +N   +  V + C    N  M  Q HG
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             IK G  S  Y  S+++  Y   G+LD +       +  D  +W A++S   + G+  E
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+  F  +   G +P+      +L +C+  G     K        LG  +  Y     ID
Sbjct: 475 ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQY------LGSMSRDYGVKPTID 528

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
                                     Y+ +I  Y+  GL+ EA+E+ ++M     +P   
Sbjct: 529 H-------------------------YDCMIDTYSRAGLLQEALELINRMP---FEPDAM 560

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC-YGCLVDMLSRNGYLEDAKHVIE 711
           ++ S++  C     +  G +  +++   + + P     Y  L ++ S  G  E+A HV +
Sbjct: 561 SWKSLLGGCWAHCDLKLGKIAAENL---FRLDPGDTAGYILLFNLYSAFGKWEEAGHVRK 617

Query: 712 IM 713
           +M
Sbjct: 618 LM 619



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/236 (20%), Positives = 104/236 (44%), Gaps = 10/236 (4%)

Query: 492 SYVNFGQLDN--SFEFSNGAERLDMASWGAM----MSALVHQGHNHEAVTIFHSLVEAGE 545
           S  NF Q+ +  S + S+   + +    G +    + +L  QG   EA      + +A  
Sbjct: 24  SSANFAQIPSWVSLKRSSSTIKTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADV 83

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
               +    +  +C  + +    + IH  + +   N    + + ++  Y  CG     + 
Sbjct: 84  SVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQK 143

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+    N ++ +  +I AYA +G + +A+ +F  M+ + ++P+ A ++S++ +C    
Sbjct: 144 VFDEMLMKN-LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPS 202

Query: 666 LVDKGCLLFKS-MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
            ++ G  +    + +Q     + +   C  +M  R G+LE AK V + M  Q + T
Sbjct: 203 FLELGKQIHSHVIRAQLNANITVETAIC--NMYVRCGWLEGAKLVFDGMDAQNAVT 256


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 156/478 (32%), Positives = 261/478 (54%), Gaps = 3/478 (0%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N LI MY K   +  A  VF+RM  ++V+SW  L  G  +N NP ++  LF K  LSG +
Sbjct: 11  NDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVK 70

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TFS  L+ CG L  LD+G Q+  + +  GF     V +S+I M+ +CG +  A  +
Sbjct: 71  PNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACM 130

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +  +N+ +WN +++GY         L  F  + E G  ++  TF   ++ C      
Sbjct: 131 FEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAI 190

Query: 465 QMVGQIHGAIIKTGF--SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           +   QIH  +I  GF  S    +  +LI  YV  G+L  +    +  E   + SW A++ 
Sbjct: 191 KEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALIL 250

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
               +G+  E++ +F  L E+  + D +IL +++   A     Q+ K +H F IK+    
Sbjct: 251 GYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGV 310

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           ++ V ++++D Y KCG I  A   F +   + +VI +  +I  Y  HGL  EA+ +FD+M
Sbjct: 311 DISVCNSILDMYLKCGMINEAERLFSE-MPARNVISWTVMITGYGKHGLGKEAIRLFDEM 369

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +L + +P   T+++V+  CSH GLV+KG   F  + S +G++   + Y C+VD+L R G 
Sbjct: 370 QLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGR 429

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L++AK++++ MP + +  ++++LLS CR+HG+ ELG+     LL L  +N   +V++S
Sbjct: 430 LKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMMS 487



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 194/391 (49%), Gaps = 2/391 (0%)

Query: 73  LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
           +GF  D+ L N+LI MY KCG  G    VFD M +RN+VSWT ++   IQNG     L +
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           +  M  +G  PN+F   + +K C  +   + G  IH   +K   +    VG S+++ Y+K
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
            G +  A  +F  +   ++  WNAMI GY   G+  +AL +   M   G  +D++TF + 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSI--SIVNALIDMYIKSSGMDYAFKVFERMADK 310
           L+ CS +     G QIH  +I      S+  ++  ALID+Y+K   +  A +VF  + +K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
            VISW  L  G+++  N  ++  LF +   S  + +    S ++        +  G Q+ 
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
             A+      + +V +S++ M+ +CG +  A  +F  +  +N+ +W  +++GY  +    
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + ++ F  +     E +  T+  V+  C  S
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHS 391



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 179/367 (48%), Gaps = 10/367 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G Q+H   VK GF     + N++I MYSKCG       +F+ M  RNL+SW  +++   
Sbjct: 91  IGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYT 150

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEKN 179
             G  +  L ++  M+  G   +EF   S +K C  +GA + G  IH F +        N
Sbjct: 151 VAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVN 210

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++++ Y K G +  A RVF  I    V  W A+I GYA  G   E++ +   +  
Sbjct: 211 TAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRE 270

Query: 240 EGITMDKYTFINALQGCSLVADFDI---GRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
             I +D +  ++++ G  + ADF +   G+Q+H   I+      IS+ N+++DMY+K   
Sbjct: 271 SSIQVDGF-ILSSMMG--VFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGM 327

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           ++ A ++F  M  ++VISW  +  G+ ++    +   LF +  L  + P+ VT+  +L  
Sbjct: 328 INEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLG 387

Query: 357 CGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
           C     ++ G +    L  + G        + ++ +  R G ++ A ++ D++  + N+ 
Sbjct: 388 CSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVG 447

Query: 415 TWNELLS 421
            W  LLS
Sbjct: 448 IWQTLLS 454



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 176/362 (48%), Gaps = 11/362 (3%)

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF  +  +++ LI M+ +CG + +A  VFD +  +N+ +W  L+ G+  N    + L  F
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +  SGV+ N  TF   ++ C       +  QIH   +KTGF     + +S+I  Y   
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G+++ +          ++ SW AM++     G   +A+ +F  + E G   DE+   + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
            +C+ +GA +    IH F+I  GF  +    VA A+ID Y KCG +  AR  F       
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSH-IEEK 240

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            VI +  LI+ YA  G ++E+ME+F +++ +++Q       S+M   +   LV +G    
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQG---- 296

Query: 675 KSMDSQYGMQPSP-DCYGC--LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           K M +     PS  D   C  ++DM  + G + +A+ +   MP +   + +  +++G   
Sbjct: 297 KQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVIS-WTVMITGYGK 355

Query: 732 HG 733
           HG
Sbjct: 356 HG 357



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 43/253 (16%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++ D   L+  + +  +      G Q+H   +K+    DI + N+++ MY KCG   
Sbjct: 270 ESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMIN 329

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R+F EM  RN++SWT++++   ++G     ++++ +M+ +   P++    +V+  C 
Sbjct: 330 EAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCS 389

Query: 157 SMGASEFG---YSIHC--FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
             G  E G   +S  C    +K R+E                                  
Sbjct: 390 HSGLVEKGQEYFSRLCSYHGIKARVEH--------------------------------- 416

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             +  M+      G   EA N+V SM  E       T ++A   C +  D ++G+++ G+
Sbjct: 417 --YACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA---CRVHGDLELGKEVGGI 471

Query: 272 IIRSEVECSISIV 284
           ++R + E  ++ V
Sbjct: 472 LLRLDSENPVNYV 484



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 79/156 (50%), Gaps = 3/156 (1%)

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           +GF  ++ +++ +I  Y KCG +  A   FD+    N V+ +  L+  +  +G   E++ 
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRN-VVSWTALMCGHIQNGNPLESLL 59

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F KM L+ ++P+  TF + + AC     +D G  +   +  + G          ++DM 
Sbjct: 60  LFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQI-HDICVKTGFDMVNVVGNSIIDMY 118

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           S+ G + +A  + E+MP + +   + ++++G  + G
Sbjct: 119 SKCGRINEAACMFEVMPVR-NLISWNAMIAGYTVAG 153


>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 723

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 180/620 (29%), Positives = 322/620 (51%), Gaps = 25/620 (4%)

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +  A  NG++   +  Y ++++ G   N+ F    V K C  +     G+          
Sbjct: 16  IKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAKLSWLLQGF---------- 65

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E    VG S+ +FY K GD+ +  R F  ++S D   WN ++ G    G+  E L   S
Sbjct: 66  -ESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWFS 124

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +   G   +  T +  +  C  +  FD G +IHG +IRS      S+ N+++ +Y +  
Sbjct: 125 KLRVWGFEPNVSTLVLVIHACRSLW-FD-GEKIHGYVIRSGFWRISSVQNSILCLYSEFD 182

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILL 354
            +  A K+F+ M+++DVISW+ +   + +++ P     LF + +    + P+ VT + +L
Sbjct: 183 SLS-ARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSVL 241

Query: 355 RQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           + C  L D+D+G  +   ++  GF L +  V +SLI M+ +    + A  VFD  + +NI
Sbjct: 242 KACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRNI 301

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN +L+G+ +N    + L+ F  + +  +E +  T   +++ C   E+      IHG 
Sbjct: 302 VSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVCKFFEHPLPCKSIHGV 361

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           II+ G+ S     SSL+ +Y +   +D++    +     D+ S   M+S L   G + EA
Sbjct: 362 IIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSDEA 421

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVID 592
           ++IF    +  +KP+   + ++L++C+     + +K  H   I+ G    ++ V ++++D
Sbjct: 422 ISIF---CQMRDKPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSIVD 478

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
           AYAKCG I  AR  FDQ      ++ +  +I AYA +GL  +A+  FD+MK  +  P+  
Sbjct: 479 AYAKCGAIDIARRTFDQ-ITEKSIVSWTVIISAYAINGLPDKALASFDEMKRDSYTPNAV 537

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           T+++ +SAC+H GLV KG ++F+SM  +   +PS   Y C+VDMLSR G ++ A  +I+ 
Sbjct: 538 TYLAALSACNHGGLVKKGLMIFRSM-VEEDQKPSLQHYSCIVDMLSRAGEIDTAMELIKN 596

Query: 713 MP--FQPSPTVYRSLLSGCR 730
           +P   +   + + ++LSGCR
Sbjct: 597 LPEDVKAGASAWGAILSGCR 616



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 236/479 (49%), Gaps = 36/479 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG++++ GF     +QN+++ +YS+        ++FDEM+ER+++SW++++ + +Q
Sbjct: 152 GEKIHGYVIRSGFWRISSVQNSILCLYSEFDSLS-ARKLFDEMSERDVISWSVVIRSYVQ 210

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE-KNP 180
           + E  +GL+++ +M +     P+   V SV+K C  +   + G S+H F+++   +  + 
Sbjct: 211 SQEPVLGLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDV 270

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  S+++ Y+K  D  +A RVF   +  ++  WN+++ G+ +     EAL +   M  E
Sbjct: 271 FVRNSLIDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKE 330

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  D+ T ++ LQ C         + IHG+IIR   E +   +++L+D Y   S +D A
Sbjct: 331 ALEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDA 390

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VF+ M+ KDV+S +T+  G        +  S+F +      +PN +T   LL  C   
Sbjct: 391 RTVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQM---RDKPNAITVISLLSACSVS 447

Query: 361 LDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             L        +A+  G  +++ +V +S++  + +CGA+++A   FD ++ K+I +W  +
Sbjct: 448 AVLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVI 507

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y  N      L +F  +       N  T+   +  C            HG ++K G 
Sbjct: 508 ISAYAINGLPDKALASFDEMKRDSYTPNAVTYLAALSACN-----------HGGLVKKGL 556

Query: 480 -------------SSCGYICSSLIKSYVNFGQLDNSFEF-SNGAE--RLDMASWGAMMS 522
                        S   Y C  ++      G++D + E   N  E  +   ++WGA++S
Sbjct: 557 MIFRSMVEEDQKPSLQHYSC--IVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILS 613



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 245/534 (45%), Gaps = 11/534 (2%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF + + + N++   Y KCG    GLR FD M  R+ VSW +IV   + +G  + GL  +
Sbjct: 64  GFESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFGLLDHGFEEEGLWWF 123

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             ++  GF PN   +  V+  C S+     G  IH + ++    +   V  S+L  Y++ 
Sbjct: 124 SKLRVWGFEPNVSTLVLVIHACRSLWFD--GEKIHGYVIRSGFWRISSVQNSILCLYSEF 181

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT-MDKYTFINA 252
            D  +A ++F  +S  DV  W+ +I  Y         L +   M+ E  T  D  T  + 
Sbjct: 182 -DSLSARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLELFKEMVREAKTEPDCVTVTSV 240

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           L+ C+++ D D+GR +HG  IR   +   + + N+LIDMY K    D AF+VF+    ++
Sbjct: 241 LKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSLIDMYSKGYDADSAFRVFDETTCRN 300

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQ 370
           ++SWN++  GF  N+   +   +F          + VT   LL+ C K  +  L  + + 
Sbjct: 301 IVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVTLVSLLQVC-KFFEHPLPCKSIH 359

Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
            + +  G+   E   SSL+  +  C  V+ A +VFD++SYK++ + + ++SG        
Sbjct: 360 GVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMSYKDVVSCSTMISGLGRCGRSD 419

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICSSL 489
           + +  FC + +   + N  T   ++  C  S   +     HG  I+ G +     + +S+
Sbjct: 420 EAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKWAHGIAIRRGLAINDISVDTSI 476

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           + +Y   G +D +    +      + SW  ++SA    G   +A+  F  +      P+ 
Sbjct: 477 VDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAINGLPDKALASFDEMKRDSYTPNA 536

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
                 L++C   G  ++   I   +++      +   S ++D  ++ G+I  A
Sbjct: 537 VTYLAALSACNHGGLVKKGLMIFRSMVEEDQKPSLQHYSCIVDMLSRAGEIDTA 590



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/286 (21%), Positives = 124/286 (43%), Gaps = 7/286 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D + L   L + +  +  +    +HG I++ G+ ++    ++L+  Y+ C       
Sbjct: 332 LEADEVTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDAR 391

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD M+ +++VS + ++S   + G  D  + ++  M+     PN   V S++  C    
Sbjct: 392 TVFDSMSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRDK---PNAITVISLLSACSVSA 448

Query: 160 ASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                   H  A++  +  N   V  S+++ YAK G +  A R F  I+   +  W  +I
Sbjct: 449 VLRTSKWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVII 508

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA  G   +AL     M  +  T +  T++ AL  C+       G  I   ++  + +
Sbjct: 509 SAYAINGLPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEEDQK 568

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADK---DVISWNTLFGG 321
            S+   + ++DM  ++  +D A ++ + + +       +W  +  G
Sbjct: 569 PSLQHYSCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSG 614


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 161/531 (30%), Positives = 271/531 (51%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ L++  I S    G+ YA  VFE + + +++ WNT+F G 
Sbjct: 19  RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C KL     G Q+    L  G+  + 
Sbjct: 79  ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDL 138

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSY-------------------------------K 411
            V +SLI M+ + G  + AH VFD  S+                               K
Sbjct: 139 YVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVK 198

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN ++SGY     + + L  F  + ++ V+ +  T   VV  C +S + Q+  Q+H
Sbjct: 199 DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   G  S   I ++LI  Y   G+++ +     G    D+ SW  M+    H     
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P++  + +IL +CA +GA    + IH ++ K   G      + ++
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A   F+ S +   +   N +I  +A HG  + A +IF +M+   ++P
Sbjct: 379 LIDMYAKCGDIEAAHQVFN-SMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L   G  ++A+ +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEM 497

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M  +P   ++ SLL  C++HGN ELGE  ++KL+ + P+N  ++VLLS
Sbjct: 498 INTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLS 548



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 254/565 (44%), Gaps = 69/565 (12%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIA---MYSKCGYFGWGLRVFDEMA 106
           SLSL  N K+      +H  ++K G  N  +  + L+    +        + + VF+ + 
Sbjct: 5   SLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E NL+ W  +      + +    +K+YV M + G +PN +    ++K C  +  S+ G  
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQ 124

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGD------------------------------- 195
           IH   LK+  E + +V  S+++ Y K G                                
Sbjct: 125 IHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGY 184

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + +A+++F  I   DV  WNA+I GYA  G   EAL++   M+   +  D+ T +  +  
Sbjct: 185 IESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSA 244

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+      +GRQ+H  I    +  ++ IVNALID+Y K   ++ A  +F+ +++KDVISW
Sbjct: 245 CAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISW 304

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           NT+ GG++      +   LF + + SG  PN VT   +L  C +L  +D G  +      
Sbjct: 305 NTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDK 364

Query: 376 --CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G  +  ++ +SLI M+ +CG +E AH VF+++ ++ ++  N ++ G+  +       
Sbjct: 365 RIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAF 424

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             F  + ++G+E +  TF  ++  C            H  ++  G      I  S+ ++Y
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACS-----------HSGMLDLGRR----IFRSMTQNY 469

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
               +L++               +G M+  L H G   EA  + +++     +PD  I  
Sbjct: 470 KITPKLEH---------------YGCMIDLLGHLGLFKEAEEMINTMT---MEPDGVIWC 511

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKL 578
           ++L +C   G  +  +S    +IK+
Sbjct: 512 SLLKACKMHGNVELGESFAQKLIKI 536



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 193/404 (47%), Gaps = 42/404 (10%)

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC----RCGAVEMA 401
           NH + S LL  C  L  L +   +    +  G L   N   S +  FC        +  A
Sbjct: 2   NHPSLS-LLHNCKTLQSLRI---IHAQMIKTG-LHNTNYALSRLLEFCILSPNFDGLPYA 56

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            SVF+ +   N+  WN +  G+  +      +K +  +   G+  N  TF +++++C + 
Sbjct: 57  ISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKL 116

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG------------- 508
           +  +   QIHG ++K G+    Y+ +SLI  YV  G+  ++ +  +G             
Sbjct: 117 KVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALI 176

Query: 509 -----------AERL-------DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
                      A+++       D+ SW A++S     G+N EA+ +F  +++   KPDE 
Sbjct: 177 TGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDES 236

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            + T++++CA  G+ Q  + +H ++   G  + + + +A+ID Y+KCG+++ A   F Q 
Sbjct: 237 TMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLF-QG 295

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            ++ DVI +NT+I  Y H  L  EA+ +F +M  +   P+  T +S++ AC+  G +D G
Sbjct: 296 LSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFG 355

Query: 671 CLLFKSMDSQY-GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             +   +D +  G+  +      L+DM ++ G +E A  V   M
Sbjct: 356 RWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 399



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 11/249 (4%)

Query: 30  GNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           GNN+   D F       ++ D   +   +S      S  LG QVH  I   G  +++ + 
Sbjct: 214 GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIV 273

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI +YSKCG       +F  ++ ++++SW  ++        +   L ++ +M  +G  
Sbjct: 274 NALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGEN 333

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE---KNPFVGCSVLNFYAKLGDVAAA 199
           PN+  + S++  C  +GA +FG  IH +  K RI+       +  S+++ YAK GD+ AA
Sbjct: 334 PNDVTMLSILPACAQLGAIDFGRWIHVYIDK-RIKGVTNASSLRTSLIDMYAKCGDIEAA 392

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            +VF S+    +   NAMI G+A  G    A ++ S M   GI  D  TF+  L  CS  
Sbjct: 393 HQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHS 452

Query: 260 ADFDIGRQI 268
              D+GR+I
Sbjct: 453 GMLDLGRRI 461


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 303/649 (46%), Gaps = 65/649 (10%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E N      ++N YAK G ++ AE +F  +   DV  WN ++ GY       + L    S
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 237 MLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           M   G ++ + +TF   ++ C  +   ++  Q+ GL  + +      +  AL+DM+++  
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187

Query: 296 -------------------------------GMDYAFKVFERMADKDVISWNTLFGGFSE 324
                                          G+D+A + FE MA++DV+SWN +    S+
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           +    +   L  +    G R +  T++  L  C +L  L  G QL    +      +  V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S+LI ++ +CG+ + A  VF+++  +N  +W  L+ G     C +  ++ F  +    +
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYI----- 485
            ++      ++  C    +  +  Q+H   +K+G              ++ CG +     
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427

Query: 486 ------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
                        +S+I +Y   G +  + EF +G +  +  +W AM+ A +  G   + 
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDG 487

Query: 534 VTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + ++ +++   +  PD     T+   CA IGA +    I    +K G    V VA+A I 
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG I  A+  FD   N  DV+ +N +I  Y+ HG+  +A + FD M     +P   
Sbjct: 548 MYSKCGRISEAQKLFDL-LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           ++V+V+S CSH GLV +G L F  M   +G+ P  + + C+VD+L R G+L +AK +I+ 
Sbjct: 607 SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           MP +P+  V+ +LLS C+IHGN EL E A++ +  L   +  +++LL+K
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 170/722 (23%), Positives = 287/722 (39%), Gaps = 105/722 (14%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV------------------------ 101
           +HG +V +G  + +FLQN L+  Y  CG      R+                        
Sbjct: 26  LHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85

Query: 102 --------FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVM 152
                   FD M  R++ SW  ++S   Q   F  GL+ +V M  +G  +PN F    VM
Sbjct: 86  SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNP---------FVGCSVLNF-------------- 189
           K C ++G  E    +     K     +P         FV C  ++F              
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 205

Query: 190 --------YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
                   YAKL  +  A   F  ++  DV  WN MI   +  G   EAL +V  M  +G
Sbjct: 206 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 265

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  T+ ++L  C+ +     G+Q+H  +IRS  +    + +ALI++Y K      A 
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 325

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF  + D++ +SW  L GG  + +   ++  LF++        +    + L+  C   +
Sbjct: 326 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV----------------- 404
           DL LG QL  L L  G      V++SLI ++ +CG ++ A  V                 
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 405 --------------FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGC 449
                         FD +  +N  TWN +L  Y  +  + D LK +  +  +  V  +  
Sbjct: 446 AYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFS 506
           T+  +   C      ++  QI G  +K G      + ++ I  Y   G++  +   F+  
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           NG    D+ SW AM++     G   +A   F  ++  G KPD      +L+ C+  G  Q
Sbjct: 566 NGK---DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622

Query: 567 RTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
             K     + ++ G +  +   S ++D   + G +  A+   D+        V+  L+ A
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
              HG   E  E+  K       P   +++ +    S  G  D    + K M  + G++ 
Sbjct: 683 CKIHG-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK-GIKK 740

Query: 686 SP 687
           +P
Sbjct: 741 NP 742



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 34/417 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + LI +Y+KCG F    
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 325

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF+ + +RN VSWT+++  ++Q   F   ++++  M+      ++FA+ +++  C +  
Sbjct: 326 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG------- 212
               G  +H   LK    +   V  S+++ YAK GD+  AE VF S+S  D+        
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 213 ------------------------CWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
                                    WNAM+G Y   G   + L + S+ML +  +T D  
Sbjct: 446 AYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  +++ +  ++S+ NA I MY K   +  A K+F+ +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG- 366
             KDV+SWN +  G+S++    Q A  F   +  G++P+++++  +L  C     +  G 
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
           L    +    G        S ++ +  R G +  A  + D +  K     W  LLS 
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 38/211 (18%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L   L SC + GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR       
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADI 66

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ----------------------- 648
              +VI +N ++  YA  G +S+A E+FD+M   ++                        
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 649 ---------PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
                    P+  TF  VM +C   G  +    L   +  ++     PD    LVDM  R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL-GLFWKFDFWGDPDVETALVDMFVR 185

Query: 700 NGYLEDAKHVIEIMPFQPSPTVY--RSLLSG 728
            GY++ A  +   +     PT++   S+L+G
Sbjct: 186 CGYVDFASRLFSQI---ERPTIFCRNSMLAG 213


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 181/669 (27%), Positives = 322/669 (48%), Gaps = 34/669 (5%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN--EFAVGSVMKVCVS 157
           ++FD + +   V W  I+   I N      L  Y  MK      N   +   S +K C  
Sbjct: 60  QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE 119

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA------AAERVFYSISSDDV 211
               + G ++HC  ++     +  V  S++N Y    +           +VF ++   +V
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN +I  Y   G   EA      M+   +     +F+N     S+          +GL
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239

Query: 272 IIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           +++   E    + +V++ I MY +   ++ + +VF+   ++++  WNT+ G + +N    
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV 299

Query: 330 QTASLFHKFILSGSRP---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE---- 382
           ++  LF + I  GS+    + VT+ +       L  ++LG Q        GF+ +     
Sbjct: 300 ESIELFLEAI--GSKEIVSDEVTYLLAASAVSALQQVELGRQFH------GFVSKNFREL 351

Query: 383 --NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              + +SL+ M+ RCG+V  +  VF ++  +++ +WN ++S +  N  D + L     + 
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           + G +++  T   ++       N+++  Q H  +I+ G    G + S LI  Y   G + 
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIR 470

Query: 501 NS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            S   FE S  AER D A+W +M+S     GH  +   +F  ++E   +P+   + +IL 
Sbjct: 471 ISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILP 529

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           +C+ IG+    K +H F I+   +  V+VASA++D Y+K G IK A   F Q+   N V 
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV- 588

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            Y T+I+ Y  HG+   A+ +F  M+ + ++P   TFV+V+SACS+ GL+D+G  +F+ M
Sbjct: 589 TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS-PTVYRSLLSGCRIHGNKE 736
              Y +QPS + Y C+ DML R G + +A   ++ +  + +   ++ SLL  C++HG  E
Sbjct: 649 REVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELE 708

Query: 737 LGEWASEKL 745
           L E  SE+L
Sbjct: 709 LAETVSERL 717



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 261/534 (48%), Gaps = 31/534 (5%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----GYFGWGL--RVF 102
           K+ + ++NLK+   G  VH H+++    +   + N+L+ MY  C      F + +  +VF
Sbjct: 115 KACAETKNLKA---GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171

Query: 103 DEMAERNLVSWTLIVSAAIQNG-------EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           D M  +N+V+W  ++S  ++ G       +F + ++M V      F+ N F   S+ +  
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV-NVFPAVSISR-- 228

Query: 156 VSMGASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
            S+  +   Y +    LK+  E  K+ FV  S ++ YA+LGD+ ++ RVF S    ++  
Sbjct: 229 -SIKKANVFYGL---MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284

Query: 214 WNAMIGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
           WN MIG Y       E++ + + ++  + I  D+ T++ A    S +   ++GRQ HG +
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
            ++  E  I IVN+L+ MY +   +  +F VF  M ++DV+SWNT+   F +N    +  
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            L ++    G + +++T + LL     L + ++G Q     +  G +  E + S LI M+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMY 463

Query: 393 CRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
            + G + ++  +F+   Y  ++  TWN ++SGY  N         F  + E  +  N  T
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGA 509
              ++  C +  +  +  Q+HG  I+       ++ S+L+  Y   G +  + + FS   
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           ER +  ++  M+      G    A+++F S+ E+G KPD      +L++C+  G
Sbjct: 584 ER-NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 20/505 (3%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           ++S+S ++K        +G ++KLG  +  D+F+ ++ I+MY++ G      RVFD   E
Sbjct: 223 AVSISRSIKK---ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           RN+  W  ++   +QN      ++++++ + +   + +E           ++   E G  
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
            H F  K   E    +  S++  Y++ G V  +  VF S+   DV  WN MI  +   G 
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL 399

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             E L +V  M  +G  +D  T    L   S + + +IG+Q H  +IR  ++    + + 
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSY 458

Query: 287 LIDMYIKSSGMDYAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           LIDMY KS  +  + K+FE    A++D  +WN++  G+++N +  +T  +F K +    R
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHS 403
           PN VT + +L  C ++  +DLG QL   ++   +LD+   V S+L+ M+ + GA++ A  
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIR-QYLDQNVFVASALVDMYSKAGAIKYAED 577

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS-- 461
           +F     +N  T+  ++ GY  +      +  F ++ ESG++ +  TF  V+  C  S  
Sbjct: 578 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637

Query: 462 --ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMAS-W 517
             E  ++  ++   +     SS  Y C + +   V  G+++ ++EF  G  E  ++A  W
Sbjct: 638 IDEGLKIFEEMR-EVYNIQPSSEHYCCITDMLGRV--GRVNEAYEFVKGLGEEGNIAELW 694

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVE 542
           G+++ +    G    A T+   L +
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAK 719



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 252/563 (44%), Gaps = 24/563 (4%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG--ITMDKYTFIN 251
           G+   A ++F +I       WN +I G+       EAL   S M         D YT+ +
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM------DYAFKVFE 305
            L+ C+   +   G+ +H  +IR     S  + N+L++MY+           D   KVF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-----SILLRQCGKL 360
            M  K+V++WNTL   + +     +    F   +    +P+ V+F     ++ + +  K 
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            ++  GL L+   L   ++ +  V SS I M+   G +E +  VFD+   +NI  WN ++
Sbjct: 233 ANVFYGLMLK---LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289

Query: 421 SGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
             Y  N C  + ++ F   I    +  +  T+          +  ++  Q HG + K   
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                I +SL+  Y   G +  SF         D+ SW  M+SA V  G + E + + + 
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + + G K D   +  +L++ + +   +  K  H F+I+ G   E  + S +ID Y+K G 
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGL 468

Query: 600 IKGARMAFDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           I+ ++  F+ S +   D   +N++I  Y  +G   +   +F KM   N++P+  T  S++
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            ACS  G VD G  L      QY +  +      LVDM S+ G ++ A+ +      + S
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587

Query: 719 PTVYRSLLSGCRIHGNKELGEWA 741
            T Y +++ G   HG   +GE A
Sbjct: 588 VT-YTTMILGYGQHG---MGERA 606



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/295 (21%), Positives = 134/295 (45%), Gaps = 12/295 (4%)

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           S +   C+ G  ++A  +FD +       WN ++ G+  N    + L  +  + ++    
Sbjct: 44  SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103

Query: 447 N--GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           N    T+   ++ C  ++N +    +H  +I+   +S   + +SL+  YV+     + FE
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163

Query: 505 FS------NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +       +   R ++ +W  ++S  V  G N EA   F  ++    KP       +  +
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223

Query: 559 CAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +   + ++    +  ++KLG  +  +++V S+ I  YA+ GDI+ +R  FD     N +
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN-I 282

Query: 617 IVYNTLIMAYAHHGLVSEAMEIF-DKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            V+NT+I  Y  +  + E++E+F + +    +   + T++   SA S    V+ G
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 64/128 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + + +A  L     + S  LG Q+HG  ++     ++F+ + L+ MYSK G   +  
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 576

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +  ERN V++T ++    Q+G  +  + +++ M+ +G  P+     +V+  C   G
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636

Query: 160 ASEFGYSI 167
             + G  I
Sbjct: 637 LIDEGLKI 644


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  273 bits (697), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 162/584 (27%), Positives = 307/584 (52%), Gaps = 1/584 (0%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +NP +   +++ YA LG +  + +VF S+   ++  +NA++      G     L V   M
Sbjct: 57  QNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQM 116

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           + + +  D+ T+   L+ CS  ++   GR IHG +++   +    +  AL +MY +    
Sbjct: 117 VAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEF 176

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A ++F++ + KD+   ++L     +N N      +F + I     P+  TF  LLR  
Sbjct: 177 ENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI 236

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  + L   + C+A+      +  V ++++ ++ +  ++  A  +FD +  K+   WN
Sbjct: 237 AGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWN 296

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++ Y       + L+ F ++  SG+  +  T   V+ +  + +      Q H  I++ 
Sbjct: 297 IMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 356

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G  S   + +SLI  Y     LD++ +  N      + SW AM+   V  G +  A+++F
Sbjct: 357 GSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLF 416

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +   G + D  I+  IL +   IGA +  K +H + +KLG  +   + +A++  YAKC
Sbjct: 417 SKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKC 476

Query: 598 GDIKGARMAFDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           G I+ A+  F++   +  D+I++N++I A+A+HG  S+  +++++MK +N +P Q TF+ 
Sbjct: 477 GSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLG 536

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           +++AC + GLV+KG   FK M   YG QPS + Y C+V++L R G + +A  +++ MP +
Sbjct: 537 LLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIK 596

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P   V+  LLS C++H   +L E+A+EKL+ + P+N   ++LLS
Sbjct: 597 PDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLS 640



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 145/658 (22%), Positives = 276/658 (41%), Gaps = 32/658 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H   +  GF  +  L + LI  Y+  G     L+VF  + + NL  +  I+    + G
Sbjct: 45  QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYG 104

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E +  L +Y  M      P+E     V++ C S     FG +IH + +K+  +    V  
Sbjct: 105 ESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVAT 164

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++   Y +  +   A ++F   S  D+G  +++         G     V   M+ E +  
Sbjct: 165 ALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVP 224

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D +TF N L+  + +    + + +H + I S++   + +  A++ +Y K   +  A K+F
Sbjct: 225 DSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLF 284

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M +KD + WN +   ++    P +   LF     SG R +  T   ++    +L  +D
Sbjct: 285 DKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVD 344

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q     L  G   + +V +SLI M+C C  ++ A  +F+ ++ K++ +W+ ++ GY 
Sbjct: 345 WGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYV 404

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      L  F  +   G++ +      ++         + V  +HG  +K G +S   
Sbjct: 405 KNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPS 464

Query: 485 ICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
           + ++L+ +Y   G ++ +   FE     ++ D+  W +M+SA  + G   +   +++ + 
Sbjct: 465 LNTALLITYAKCGSIEMAQRLFEEEKIDDK-DLIMWNSMISAHANHGDWSQCFKLYNRMK 523

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA------ 595
            +  KPD+     +L +C   G  ++ K     +      TE Y      + YA      
Sbjct: 524 CSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEM------TESYGCQPSQEHYACMVNLL 577

Query: 596 -KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-T 653
            + G I  A           D  V+  L+ A   H      +  F   KL N++P  A  
Sbjct: 578 GRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHP--GSKLAEFAAEKLINMEPRNAGN 635

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           ++ + +  +  G  D G    +S     G++  P C            +LE   HV E
Sbjct: 636 YILLSNIYAAAGKWD-GVAKMRSFLRNKGLKKIPGC-----------SWLEINGHVTE 681



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 195/403 (48%), Gaps = 6/403 (1%)

Query: 63  GTQVHGHIVKLGFTNDIF--LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  +HG++VKLGF  D+F  +   L  MY +C  F    ++FD+ + ++L   + + +  
Sbjct: 144 GRTIHGYLVKLGF--DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEG 201

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QN   +   +++  M     +P+ F   ++++    + + +    +HC A+  ++  + 
Sbjct: 202 PQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDL 261

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  +VL+ Y+KL  +  A ++F  +   D   WN MI  YA  G   E L +  SM   
Sbjct: 262 LVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARS 321

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D +T +  +   + +   D G+Q H  I+R+  +  +S+ N+LIDMY +   +D A
Sbjct: 322 GIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSA 381

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F  M DK VISW+ +  G+ +N       SLF K    G + + V    +L     +
Sbjct: 382 CKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHI 441

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF--DNVSYKNITTWNE 418
             L+    L   ++  G     ++ ++L+  + +CG++EMA  +F  + +  K++  WN 
Sbjct: 442 GALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNS 501

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           ++S +  +   +   K +  +  S  + +  TF  ++  C  S
Sbjct: 502 MISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNS 544



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/446 (19%), Positives = 192/446 (43%), Gaps = 2/446 (0%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           +QIH   I      + ++ + LID Y     ++++ +VF  + D ++  +N +    +  
Sbjct: 44  QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRY 103

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
               +T  ++ + +     P+  T+  +LR C    ++  G  +    +  GF   + V 
Sbjct: 104 GESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVA 163

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++L  M+  C   E AH +FD  S K++   + L +    N     + + F  +    + 
Sbjct: 164 TALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLV 223

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +  TFF ++       + Q+   +H   I +  S    + ++++  Y     L ++ + 
Sbjct: 224 PDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKL 283

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
            +     D   W  M++A   +G   E + +F S+  +G + D +    +++S A +   
Sbjct: 284 FDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCV 343

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
              K  H  +++ G +++V V +++ID Y +C  +  A   F+       VI ++ +I  
Sbjct: 344 DWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNW-MTDKSVISWSAMIKG 402

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           Y  +G    A+ +F KMK   +Q      ++++ A  H G ++    L      + G+  
Sbjct: 403 YVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYL-HGYSMKLGLTS 461

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIE 711
            P     L+   ++ G +E A+ + E
Sbjct: 462 LPSLNTALLITYAKCGSIEMAQRLFE 487



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 111/221 (50%), Gaps = 2/221 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R D       +S    LK    G Q H HI++ G  + + + N+LI MY +C     
Sbjct: 321 SGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDS 380

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             ++F+ M +++++SW+ ++   ++NG+    L ++  MK++G   +   + +++   V 
Sbjct: 381 ACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVH 440

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWN 215
           +GA E    +H +++K+ +   P +  ++L  YAK G +  A+R+F    I   D+  WN
Sbjct: 441 IGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWN 500

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
           +MI  +A+ G   +   + + M       D+ TF+  L  C
Sbjct: 501 SMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 541



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 1/199 (0%)

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           R  + Q + QIH   I  GF     + S LI  Y N G L++S +        ++  + A
Sbjct: 36  RCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNA 95

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           ++  L   G +   + ++  +V     PDE     +L SC++       ++IH +++KLG
Sbjct: 96  ILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLG 155

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           F+    VA+A+ + Y +C + + A   FD+  +  D+   ++L      +        +F
Sbjct: 156 FDLFDVVATALAEMYEECIEFENAHQLFDKR-SVKDLGWPSSLTTEGPQNDNGEGIFRVF 214

Query: 640 DKMKLANLQPSQATFVSVM 658
            +M    L P   TF +++
Sbjct: 215 GRMIAEQLVPDSFTFFNLL 233



 Score = 44.3 bits (103), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 529 HNHEAVTIFHSLV----EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
           H H +  I HS +     A +      L  + + C +I   Q  + IH   I  GF+   
Sbjct: 3   HLHRSKPIIHSPIFLNFPATQSRLLNTLSLLFSRCNSI---QHLQQIHARFILHGFHQNP 59

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            ++S +ID YA  G +  +   F    + N + ++N ++     +G     + ++ +M  
Sbjct: 60  TLSSKLIDCYANLGLLNHSLQVFCSVIDPN-LTLFNAILRNLTRYGESERTLLVYQQMVA 118

Query: 645 ANLQPSQATFVSVMSACS 662
            ++ P + T+  V+ +CS
Sbjct: 119 KSMHPDEETYPFVLRSCS 136


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 271/531 (51%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ LI+  I S    G+ YA  VFE + + +++ WNT+F G 
Sbjct: 7   RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C K      G Q+    L  G   + 
Sbjct: 67  ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDN------VSY-------------------------K 411
            V +SLI M+ + G +E AH VFD       VSY                         K
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN ++SGY       + L+ F ++ ++ V  +  T   VV  C +S + ++  Q+H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF S   I ++LI  Y   G+L+ +     G    D+ SW  ++    H     
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P++  + +IL +CA +GA    + IH ++ K   G      + ++
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A   F+ S     +  +N +I  +A HG    + +IF +M+   ++P
Sbjct: 367 LIDMYAKCGDIEAAHQVFN-SILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEP 425

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y M P  + YGC++D+L  +G  ++A+ +
Sbjct: 426 DDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 485

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M  +P   ++ SLL  C++HGN ELGE  ++ L+ + P+N  ++VLLS
Sbjct: 486 INTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLS 536



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 246/549 (44%), Gaps = 69/549 (12%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +H  ++K G  N  +  + LI       +F    + + VF+ + E NL+ W  +      
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +    LK+YV M + G +PN +    ++K C    A + G  IH   LK+  + + +V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 183 GCSVLNFY-------------------------------AKLGDVAAAERVFYSISSDDV 211
             S+++ Y                               A  G +  A+++F  I   DV
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI GYA  G   EAL +   M+   +  D+ T +  +  C+     ++GRQ+H  
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I       ++ IVNALID+Y K   ++ A  +FE +  KDVISWNTL GG++      + 
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--ALHCGFLDEENVTSSLI 389
             LF + + SG  PN VT   +L  C  L  +D+G  +         G  +  ++ +SLI
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLI 368

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +E AH VF+++ +K++++WN ++ G+  +         F  + ++G+E +  
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDI 428

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++  C            H  ++  G     +I  S+ + Y    +L++        
Sbjct: 429 TFVGLLSACS-----------HSGMLDLG----RHIFRSMTQDYKMTPKLEH-------- 465

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
                  +G M+  L H G   EA  + +++     +PD  I  ++L +C   G  +  +
Sbjct: 466 -------YGCMIDLLGHSGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELGE 515

Query: 570 SIHPFVIKL 578
           S    +IK+
Sbjct: 516 SFAQNLIKI 524



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   +S      S  LG QVH  I   GF +++ + N LI +YSKCG      
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ +  ++++SW  ++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 279 GLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 338

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +     +  S+++ YAK GD+ AA +VF SI    +  WNAM
Sbjct: 339 AIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 398

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           I G+A  G    + ++ S M   GI  D  TF+  L  CS     D+GR I
Sbjct: 399 IFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 449



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 34/285 (11%)

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYV---NFGQLDNSFEFSNGAERLDMASWGAMM 521
           Q +  IH  +IKTG  +  Y  S LI+  +   +F  L  +       +  ++  W  M 
Sbjct: 4   QSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMF 63

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
                      A+ ++  ++  G  P+ Y    +L SCA   A++  + IH  V+KLG +
Sbjct: 64  RGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCD 123

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN--------------------------- 614
            ++YV +++I  Y + G ++ A   FD+S + +                           
Sbjct: 124 LDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEI 183

Query: 615 ---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              DV+ +N +I  YA  G   EA+E+F  M   N++P ++T V+V+SAC+  G ++ G 
Sbjct: 184 PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 243

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            +   +D  +G   +      L+D+ S+ G LE A  + E +P++
Sbjct: 244 QVHSWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK 287


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 161/596 (27%), Positives = 303/596 (50%), Gaps = 3/596 (0%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  AL+     + F G +++ FYA  G    A RVF  + + DV  WN+++  +  
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                +A   + SM+  G+ ++  + ++ +  C +  +   G  +HGL++++ ++  +++
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            NAL+DMY K   ++ + KVFE M +++ +SWN+  G F      G   +LF      G 
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGF 274

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            P  +T S LL    +L   DLG ++   ++      +  V +SL+ M+ + G++E A +
Sbjct: 275 MPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACA 334

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF+ +  +N+ +WN +++    N  +++       + + G   N  T   ++  C R  +
Sbjct: 335 VFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMAS 394

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   QIH   I+TG     +I ++LI  Y   GQL  +    + +E+ D+ S+  ++  
Sbjct: 395 LKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDV-SYNTLILG 453

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                 + E++ +F  L   G + D       L +C  + ++++ K IH  +++   +  
Sbjct: 454 YSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNH 513

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
            ++A+ ++  Y K G +  A   F++     DV  +N +IM Y  HG +  A  +FD MK
Sbjct: 514 PFLANTLLGLYTKGGMLDTASKIFNR-IKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMK 572

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              +     ++++V+S CSH GLV++G   F  M +Q  ++P    Y C+VD+L R+G L
Sbjct: 573 DHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQL 631

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++  +I  MPF  +  V+ +LL  CRIHGN EL ++A++ L  L P++   + +L
Sbjct: 632 TESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVL 687



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 156/597 (26%), Positives = 284/597 (47%), Gaps = 5/597 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H   ++ G   D+F  N L+A Y+ CG+ G   RVFDEM  R++VSW  +VS+ + 
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLA 154

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N  FD   +  + M  +G   N  ++ SV+  C       FG  +H   LK  ++    +
Sbjct: 155 NKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNL 214

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y K G V A+ +VF  +   +   WN+ IG + + G   + L +   M   G 
Sbjct: 215 GNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGF 274

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                T  + L     +  FD+GR++HG  I+  +E  I + N+L+DMY K   ++ A  
Sbjct: 275 MPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACA 334

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE++  ++V+SWN +     +N    +   L  K    G  PN +T   LL  C ++  
Sbjct: 335 VFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMAS 394

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G Q+   ++  G + +  ++++LI M+ +CG + +A S+FD +S K+  ++N L+ G
Sbjct: 395 LKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILG 453

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + L  F  +   G+E +  +F   +  C    + +   +IHG +++   S+ 
Sbjct: 454 YSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNH 513

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            ++ ++L+  Y   G LD + +  N  +  D+ASW  M+      G    A  +F  + +
Sbjct: 514 PFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKD 573

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI-K 601
            G   D      +L+ C+  G  +R K     ++      +    + ++D   + G + +
Sbjct: 574 HGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTE 633

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
              +  D  F++N   V+  L+ A   HG +  A    D   L  L+P  + + SV+
Sbjct: 634 SVEIILDMPFHANS-DVWGALLGACRIHGNIELAQYAAD--HLFELKPEHSGYYSVL 687



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 198/389 (50%), Gaps = 15/389 (3%)

Query: 46  FLAKSLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           F+  S++LS  L + V      LG +VHG+ +K     DIF+ N+L+ MY+K G      
Sbjct: 274 FMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKAC 333

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+++  RN+VSW  +++  +QNG       + + M+ +G  PN   + +++  C  M 
Sbjct: 334 AVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMA 393

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + + G  IH ++++  +  + F+  ++++ YAK G +  A+ +F     DDV  +N +I 
Sbjct: 394 SLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEKDDV-SYNTLIL 452

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY+   + FE+LN+   +   GI  D  +F+ AL  C+ ++ F  G++IHG+++R  +  
Sbjct: 453 GYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSN 512

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
              + N L+ +Y K   +D A K+F R+ +KDV SWN +  G+  +   GQ  + FH F 
Sbjct: 513 HPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMH---GQIDAAFHLFD 569

Query: 340 L---SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           L    G   +HV++  +L  C     ++ G +     L      ++   + ++ +  R G
Sbjct: 570 LMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSG 629

Query: 397 AV-EMAHSVFDNVSYKNITTWNELLSGYC 424
            + E    + D   + N   W  LL G C
Sbjct: 630 QLTESVEIILDMPFHANSDVWGALL-GAC 657



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 248/553 (44%), Gaps = 16/553 (2%)

Query: 190 YAKLGDVAAAERVFY--SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           YA L D+A++  + +   +       WN++    +      EAL V + ML  G++ D  
Sbjct: 16  YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75

Query: 248 TFINALQGCSLVADFDI--GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           TF  AL   +  A      G ++H   +RS     +   N L+  Y        A +VF+
Sbjct: 76  TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  +DV+SWN+L   F  NK            + SG   N  +   ++  CG   +   
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF 195

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           GL +  L L  G     N+ ++L+ M+ + G VE +  VF+ +  +N  +WN  +  +  
Sbjct: 196 GLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLN 255

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
                DVL  F  + E G      T   ++          +  ++HG  IK       ++
Sbjct: 256 AGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFV 315

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +SL+  Y  FG L+ +       E  ++ SW AM++ LV  G   EA  +   + + GE
Sbjct: 316 ANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGE 375

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
            P+   L  +L +C+ + + +  K IH + I+ G   ++++++A+ID YAKCG ++ A+ 
Sbjct: 376 CPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQS 435

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD S    D + YNTLI+ Y+      E++ +F ++    ++    +F+  ++AC++  
Sbjct: 436 IFDLS--EKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLS 493

Query: 666 LVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
              +G     +L + + S +     P     L+ + ++ G L+ A  +   +  +     
Sbjct: 494 SFKQGKEIHGVLVRRLLSNH-----PFLANTLLGLYTKGGMLDTASKIFNRIK-EKDVAS 547

Query: 722 YRSLLSGCRIHGN 734
           + +++ G  +HG 
Sbjct: 548 WNNMIMGYGMHGQ 560



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 14/319 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + I L   L     + S   G Q+H   ++ G   D+F+ N LI MY+KCG       +F
Sbjct: 378 NSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF 437

Query: 103 DEMAERNLVSW-TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           D ++E++ VS+ TLI+  +     F+  L ++  + + G   +  +    +  C ++ + 
Sbjct: 438 D-LSEKDDVSYNTLILGYSQSPWSFE-SLNLFKQLSSVGIEYDAISFMGALTACTNLSSF 495

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  IH   ++  +  +PF+  ++L  Y K G +  A ++F  I   DV  WN MI GY
Sbjct: 496 KQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGY 555

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              G    A ++   M   G+T D  ++I  L  CS     + G++    ++   +E   
Sbjct: 556 GMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQ 615

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGG--FSENKNPGQTASLFH 336
                ++D+  +S  +  + ++   M   A+ DV  W  L G      N    Q A+  H
Sbjct: 616 MHYACMVDLLGRSGQLTESVEIILDMPFHANSDV--WGALLGACRIHGNIELAQYAA-DH 672

Query: 337 KFILSGSRPNHVTFSILLR 355
            F L   +P H  +  +LR
Sbjct: 673 LFEL---KPEHSGYYSVLR 688


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 167/531 (31%), Positives = 269/531 (50%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFS 323
           +Q H  +IR+ +       + L  +   SS   ++YA KVF+ +   +  +WNTL   ++
Sbjct: 48  KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107

Query: 324 ENKNPGQTASLFHKFILSGSR--PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
              +P  +   F   + S S+  PN  TF  L++   ++  L LG  L  +A+      +
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V +SLI+ +  CG ++ A  VF  +  K++ +WN +++G+         L+ F  +  
Sbjct: 168 VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMES 227

Query: 442 SGVEVNGCTFFYVVETCCR--------------SENQQMVGQIHGAIIKTGFSSCGYI-- 485
             V+ +  T   V+  C +               EN+  V       +   ++ CG I  
Sbjct: 228 EDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIED 287

Query: 486 ---------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
                           ++++  Y      + + E  N   + D+ +W A++SA    G  
Sbjct: 288 AKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKP 347

Query: 531 HEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           +EA+ +FH L ++   K ++  L + L++CA +GA +  + IH ++ K G     YV SA
Sbjct: 348 NEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSA 407

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +I  Y+KCGD++ AR  F+ S    DV V++ +I   A HG  SEA+++F KM+ AN++P
Sbjct: 408 LIHMYSKCGDLEKAREVFN-SVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKP 466

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +  TF +V  ACSH GLVD+   LF  M+S YG+ P    Y C+VD+L R+GYLE A   
Sbjct: 467 NGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKF 526

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           IE MP  PS +V+ +LL  C+IH N  L E A  +LL L P+ND AHVLLS
Sbjct: 527 IEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLS 577



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 210/448 (46%), Gaps = 36/448 (8%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL--IAMYSKCGYFGWGLRVFDEMAE 107
           ++SL +   S     Q H H+++ G  +D +  + L  IA  S      +  +VFDE+ +
Sbjct: 34  TISLIDRCSSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM--PNEFAVGSVMKVCVSMGASEFGY 165
            N  +W  ++ A     +    +  ++DM ++     PN++    ++K    + +   G 
Sbjct: 94  PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           S+H  A+K  +  + FV  S+++ Y   GD+ +A +VF +I   DV  WN+MI G+   G
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +AL +   M  E +     T +  L  C+ + D + GR++   I  + V  ++++ N
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273

Query: 286 ALIDMYIKSSGMDYAFKVFERMAD-------------------------------KDVIS 314
           A++DMY K   ++ A ++F+ M +                               KD+++
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           WN L   + +N  P +   +FH+  L  + + N +T    L  C ++  L+LG  +    
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G      VTS+LI+M+ +CG +E A  VF++V  +++  W+ ++ G   + C ++ +
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRS 461
             F  + E+ V+ NG TF  V   C  +
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHT 481



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 149/622 (23%), Positives = 258/622 (41%), Gaps = 89/622 (14%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYA--KLGDVAAAERVFYSISSDDVGCWNAMIGGYAH-- 223
           H   ++  +  +P+    +    A      +  A +VF  I   +   WN +I  YA   
Sbjct: 51  HAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGP 110

Query: 224 ---CG-YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
              C  + F  L++VSS        +KYTF   ++  + V+   +G+ +HG+ I+S V  
Sbjct: 111 DPVCSIWAF--LDMVSSE--SQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGS 166

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + + N+LI  Y     +D A KVF  + +KDV+SWN++  GF +  +P +   LF K  
Sbjct: 167 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 226

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV------TSSLIYMFC 393
               + +HVT   +L  C K+ DL+ G ++      C +++E  V       ++++ M+ 
Sbjct: 227 SEDVKASHVTMVGVLSACAKIRDLEFGRRV------CSYIEENRVNVNLTLANAMLDMYT 280

Query: 394 RCGAVEMAHSVFD------NVSY-------------------------KNITTWNELLSG 422
           +CG++E A  +FD      NV++                         K+I  WN L+S 
Sbjct: 281 KCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISA 340

Query: 423 YCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           Y  N    + L  F  +  +  +++N  T    +  C +    ++   IH  I K G   
Sbjct: 341 YEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKM 400

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+ S+LI  Y   G L+ + E  N  E+ D+  W AM+  L   G   EAV +F+ + 
Sbjct: 401 NFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQ 460

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           EA  KP+      +  +C+  G     +S+ +      G   E    + ++D   + G +
Sbjct: 461 EANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYL 520

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMS 659
           + A    +         V+  L+ A   H  +S A       +L  L+P +    V + +
Sbjct: 521 EKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAE--MACTRLLELEPRNDGAHVLLSN 578

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDC-------------------------YGCL- 693
             +  G  D    L K M    G++  P C                         YG L 
Sbjct: 579 IYAKSGKWDNVSELRKHMRVT-GLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLH 637

Query: 694 --VDMLSRNGYLEDAKHVIEIM 713
             ++ L  NGY  +  HV++I+
Sbjct: 638 EVMEKLKSNGYEPEMSHVLQII 659



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 190/413 (46%), Gaps = 38/413 (9%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           FL K+   +  + S  LG  +HG  +K    +D+F+ N+LI  Y  CG      +VF  +
Sbjct: 138 FLIKA---AAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 194

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            E+++VSW  +++  +Q G  D  L+++  M++     +   +  V+  C  +   EFG 
Sbjct: 195 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGR 254

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----------------YSISS 208
            +  +  + R+  N  +  ++L+ Y K G +  A+R+F                 Y+IS 
Sbjct: 255 RVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 314

Query: 209 D--------------DVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINAL 253
           D              D+  WNA+I  Y   G   EAL V   + L + I +++ T ++ L
Sbjct: 315 DYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTL 374

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C+ V   ++GR IH  I ++ ++ +  + +ALI MY K   ++ A +VF  +  +DV 
Sbjct: 375 SACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVF 434

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCL 372
            W+ + GG + +    +   +F+K   +  +PN VTF+ +   C     +D    L   +
Sbjct: 435 VWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKM 494

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT-WNELLSGYC 424
               G + E+   + ++ +  R G +E A    + +     T+ W  LL G C
Sbjct: 495 ESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL-GAC 546



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 55/120 (45%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + I L  +LS    + +  LG  +H +I K G   + ++ + LI MYSKCG      
Sbjct: 363 IKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAR 422

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +R++  W+ ++     +G     + M+  M+     PN     +V   C   G
Sbjct: 423 EVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 482


>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
 gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  272 bits (696), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 165/521 (31%), Positives = 268/521 (51%), Gaps = 20/521 (3%)

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           S+   NA++ MY +      A KVF+ +A+ DV+SW    G  S+    G  A    + +
Sbjct: 8   SMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASD----GHEAVELFRIV 63

Query: 340 LS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           LS G   N  T   +L   G +  L+ G Q+Q L    G+    +V+++L+ M+ +CG +
Sbjct: 64  LSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQI 123

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
             A  VF N+  ++  +WN L+S    N      L+ F  + E  ++    T   ++E  
Sbjct: 124 CDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAV 183

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
             S N + V QIH  ++K GF     + S LI +Y     +D S       +++++    
Sbjct: 184 SNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLN 243

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            M++  V  G+  +A+ ++ ++     K D      IL +C+AI   Q  +++H  V+K 
Sbjct: 244 TMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKT 303

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF+ + +V S+VID Y KCG I  A  AF +S + N +  +N ++M YAHHG   E  ++
Sbjct: 304 GFDQDSFVESSVIDIYCKCGSIGQAEKAF-RSSSMNSLAAWNAMMMGYAHHGCYQEVFDL 362

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F+KM    ++P + T++ V+S+C H GLV +      SM   +G+ P  + Y C++D+L 
Sbjct: 363 FNKMSQFGIEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLG 422

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G LEDAK  I+ MP QP   +++ LLS C IHG+ ELG  A+ KLL + P+N++A++L
Sbjct: 423 RVGLLEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYIL 482

Query: 759 LSK--------------RKRQREGNLLDHEGVCNVNDGIKT 785
           LS               RK  +E NL    G   +  G K+
Sbjct: 483 LSNLYASVGMWNAVGRLRKEMKEKNLRKEPGSSWIQVGRKS 523



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 237/526 (45%), Gaps = 8/526 (1%)

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +V++ YA+ G    A +VF  I+  DV  W   IG  +    G EA+ +   +L  G+ +
Sbjct: 14  AVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASD---GHEAVELFRIVLSLGLDV 70

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           ++YT IN L     V   + G+QI  L  ++     +S+ NAL+ MY K   +  A +VF
Sbjct: 71  NEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVF 130

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M  +D +SWN+L    SEN    Q   +F++      +P   T + +L       +  
Sbjct: 131 YNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTK 190

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
             +Q+  L + CGF+ + ++ S LI  + RC +++ +  VF  +   N+   N +++ + 
Sbjct: 191 QVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFV 250

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                 D L  +  IW    +V+  TF  +++ C    + Q+   +H  ++KTGF    +
Sbjct: 251 RAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSF 310

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + SS+I  Y   G +  + +    +    +A+W AMM    H G   E   +F+ + + G
Sbjct: 311 VESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFG 370

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGA 603
            +PDE     +L+SC   G  +  +     + +L G    +   + +ID   + G ++ A
Sbjct: 371 IEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDA 430

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMSACS 662
           +   D      DV ++  L+ A   HG V   +      KL  + P +++ ++ + +  +
Sbjct: 431 KKTIDHMPIQPDVHIWQILLSACNIHGHVE--LGRVAARKLLEIHPENESAYILLSNLYA 488

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
             G+ +    L K M  +  ++  P      V   S   ++ D  H
Sbjct: 489 SVGMWNAVGRLRKEMKEK-NLRKEPGSSWIQVGRKSHTFFVNDTSH 533



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/499 (24%), Positives = 226/499 (45%), Gaps = 45/499 (9%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +++MY++CG     ++VFDE+AE ++VSWT  +  A    E    ++++  + + G  
Sbjct: 13  NAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASDGHE---AVELFRIVLSLGLD 69

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            NE+ + +V+ +   +     G  I     K    +   V  ++++ Y K G +  A RV
Sbjct: 70  VNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRV 129

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           FY++   D   WN++I   +  G+  +AL V   M    +    +T  + L+  S   + 
Sbjct: 130 FYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNT 189

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
               QIH L+++      +S+++ LI  Y + + MD + +VF  +   +++  NT+   F
Sbjct: 190 KQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTF 249

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
                     +L+        + +  TFSI+L+ C  + D+ LG  +  L L  GF  + 
Sbjct: 250 VRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDS 309

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V SS+I ++C+CG++  A   F + S  ++  WN ++ GY  + C  +V   F  + + 
Sbjct: 310 FVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQF 369

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G+E +  T+  V+ +CC           HG ++K              + Y     LD+ 
Sbjct: 370 GIEPDEITYLGVLSSCC-----------HGGLVKEA------------RHY-----LDSM 401

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEA-VTIFHSLVEAGEKPDEYILGTILNSCAA 561
           FE       L+   +  M+  L   G   +A  TI H  ++    PD +I   +L++C  
Sbjct: 402 FELHGIIPHLE--HYACMIDLLGRVGLLEDAKKTIDHMPIQ----PDVHIWQILLSACNI 455

Query: 562 IG-------AYQRTKSIHP 573
            G       A ++   IHP
Sbjct: 456 HGHVELGRVAARKLLEIHP 474



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 170/379 (44%), Gaps = 4/379 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   LS+   +K    G Q+     K G+   + + N L++MY KCG      RVF  M 
Sbjct: 75  LINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNMI 134

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+ VSW  ++SA  +NG  +  L+++  M+     P    + S+++   +   ++    
Sbjct: 135 IRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQ 194

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH   +K     +  +   ++  Y +   +  ++RVF  I   ++   N MI  +   GY
Sbjct: 195 IHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGY 254

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +AL +  ++      +D  TF   L+ CS + D  +GR +H L++++  +    + ++
Sbjct: 255 YTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESS 314

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           +ID+Y K   +  A K F   +   + +WN +  G++ +    +   LF+K    G  P+
Sbjct: 315 VIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPD 374

Query: 347 HVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            +T+  +L  C  G L+            LH G +      + +I +  R G +E A   
Sbjct: 375 EITYLGVLSSCCHGGLVKEARHYLDSMFELH-GIIPHLEHYACMIDLLGRVGLLEDAKKT 433

Query: 405 FDNVSYK-NITTWNELLSG 422
            D++  + ++  W  LLS 
Sbjct: 434 IDHMPIQPDVHIWQILLSA 452


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 172/582 (29%), Positives = 302/582 (51%), Gaps = 15/582 (2%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI-GRQIHGLI 272
           W ++I GY        ALN+ S M   G  ++++T    LQ CS   D+ I G+Q H  +
Sbjct: 9   WTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACS-SPDYRIFGQQFHCFV 67

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           I+   + ++ +  +LI MY +S     A KVF+ MA KDV  +N +   ++   N  +  
Sbjct: 68  IKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKAI 127

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            +F   + +G +PN  TF+ ++  C   L ++ G Q   L+   GFL+E ++ +++I M+
Sbjct: 128 RVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMY 187

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            + G    A  +F  ++ +N+ +W  L+SGY  +      + TF  +   GV  +     
Sbjct: 188 GKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLT 247

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            +++ C    N ++  QIHG +IK G++    I ++L+  Y   G L ++    +G    
Sbjct: 248 TILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSK 307

Query: 513 DMASWGAMMSALVHQGHNHE--AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
            +AS+ A+++  +    + E   + +F+     G KPD      +L+  A      R + 
Sbjct: 308 RIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRC 367

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
            H + IK GF  ++ VA+AVI  YAKCG I+ A   F+   N +D I +N +I AYA HG
Sbjct: 368 YHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFN-VMNDHDSISWNAMISAYALHG 426

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
             ++ + +F++M      P + T +S++ AC++ GL   G  LF  M+ +YG++P  + Y
Sbjct: 427 QGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHY 486

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+VD+L R G+L +A  +I   PF  S  ++R+L++ C++ G++  G+ AS+ LL L P
Sbjct: 487 ACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKYLLELSP 546

Query: 751 KNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTV--DLKL 790
               +++L+S        N+   E + +    ++TV  DLKL
Sbjct: 547 VEAGSYILVS--------NMYAGERMLDEAAKVRTVMNDLKL 580



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/525 (27%), Positives = 253/525 (48%), Gaps = 9/525 (1%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M  RN ++WT ++   + + EF+  L +  +M  +G   NE     +++ C S     FG
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
              HCF +K   ++N  VG S++  Y +      AE+VF S++  DV C+N MI  YA  
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G G +A+ V  +ML  G+  + YTF N +  C      + G Q  GL  +       SI 
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           NA+I+MY K      A ++F  M D+++ISW  L  G++ + +  +    F +  L G  
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVN 240

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            +    + +L  C +  +L+LGLQ+  L +  G+    N+ ++L+ ++ +CG +  A  V
Sbjct: 241 FDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMV 300

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDA--DVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           FD +S K I ++N +L+G+  N  D   D +  F +    G++ +  TF  ++     S 
Sbjct: 301 FDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSL---SA 357

Query: 463 NQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           N   +G+    H   IKTGF +   + +++I  Y   G ++ +    N     D  SW A
Sbjct: 358 NHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNA 417

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKL 578
           M+SA    G   + + +F  +++    PDE  + +IL +C   G ++   S+   +  K 
Sbjct: 418 MISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKY 477

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           G    +   + ++D   + G +  A    ++S  S   +++ TL+
Sbjct: 478 GIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLV 522



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 205/404 (50%), Gaps = 2/404 (0%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R+ G Q H  ++K GF  ++ +  +LIAMY++   FG   +VFD MA +++  +  ++  
Sbjct: 57  RIFGQQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILE 116

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             + G  +  ++++++M   G  PN++   +++  C      E G      + K      
Sbjct: 117 YARAGNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNE 176

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             +G +++N Y K G    AER+F +++  ++  W A+I GY   G G +A++    +  
Sbjct: 177 TSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHL 236

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G+  D       L GCS   + ++G QIHGL+I+    C+++I  AL+D+Y K   +  
Sbjct: 237 CGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMS 296

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTAS--LFHKFILSGSRPNHVTFSILLRQC 357
           A  VF+ ++ K + S+N +  GF EN   G+     LF+ F L G +P+ VTFS LL   
Sbjct: 297 ARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLS 356

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
                L  G      A+  GF  + +V +++I M+ +CG++E AH +F+ ++  +  +WN
Sbjct: 357 ANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWN 416

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            ++S Y  +   A VL  F  + +     +  T   +++ C  S
Sbjct: 417 AMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYS 460



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 132/281 (46%), Gaps = 8/281 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HG ++KLG+   + +   L+ +Y+KCG       VFD ++ + + S+  I++  +
Sbjct: 261 LGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFDGLSSKRIASFNAILAGFM 320

Query: 122 QN---GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
           +N   GE D  + ++   + +G  P+      ++ +  +      G   H +A+K   E 
Sbjct: 321 ENSRDGEED-PIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEA 379

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  +V+  YAK G +  A R+F  ++  D   WNAMI  YA  G G + L +   M+
Sbjct: 380 DLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMI 439

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSISIVNALIDMYIKSSGM 297
            +    D+ T ++ LQ C+    F  G  +  ++  +  ++  +     ++D+  ++  +
Sbjct: 440 KKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRAGHL 499

Query: 298 DYAFKVFERMA-DKDVISWNTLFG--GFSENKNPGQTASLF 335
             A  +  +    K  + W TL        ++N G+ AS +
Sbjct: 500 SEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKLASKY 540



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 37/279 (13%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N F  D  ++ D +  ++ LSLS N  +   G   H + +K GF  D+ + N +I MY+K
Sbjct: 335 NHFRLDG-IKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAK 393

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      R+F+ M + + +SW  ++SA   +G+    L ++ +M    F P+E  + S+
Sbjct: 394 CGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSI 453

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           ++ C   G    G S+        + +  +    +L  YA                    
Sbjct: 454 LQACTYSGLFRDGISL------FNVMEPKYGIKPLLEHYA-------------------- 487

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            C   ++G   H     EA+++++   F   T+   T +N    C L  D + G+     
Sbjct: 488 -CMVDLLGRAGHLS---EAMDIINKSPFSKSTLLWRTLVNV---CKLCGDRNFGKLASKY 540

Query: 272 IIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++  S VE    I+  + +MY     +D A KV   M D
Sbjct: 541 LLELSPVEAGSYIL--VSNMYAGERMLDEAAKVRTVMND 577


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 298/581 (51%), Gaps = 21/581 (3%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG---YGFEALNVVSSMLFEGI 242
           ++NFYAK G +A A  +F +I   DV  WN++I GY+  G        + +   M  + I
Sbjct: 57  LVNFYAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDI 116

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + YT     +  S +    +GRQ H L+++      I +  +L+ MY K+ G+ Y + 
Sbjct: 117 LPNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKA-GLKYLYM 175

Query: 303 V---FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           V   F     KDV+            +   +++  F +     S  ++V F+ +L     
Sbjct: 176 VYYGFWLCYKKDVL------------RRQLKSSICFLEEKEKESDSDYV-FTAVLSSLAA 222

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
            + + LG Q+  + +  G L    ++++L+ M+ +C ++  A  +FD+   +N  TW+ +
Sbjct: 223 TVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 282

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N    + +K F  ++ +G++ +  T   V+  C          Q+H  ++K GF
Sbjct: 283 VTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGF 342

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               +  ++L+  Y   G L ++ +  +  +  D+A W +++S  V    N EA+ ++  
Sbjct: 343 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 402

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  AG  P++  + ++L +C+++   +  K +H   IK GF  EV + SA+   Y KCG 
Sbjct: 403 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGS 462

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++   + F ++ N  DV+ +N +I   +H+G   EA+E+F++M     +P   TFV+++S
Sbjct: 463 LEDGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIIS 521

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSHKG V++G   F  M  Q+G+ P  D Y C+VD+LSR G L++ K  IE        
Sbjct: 522 ACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGL 581

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            ++R LLS C+ HGN ELG +A EKL+ L  +  + +V L+
Sbjct: 582 CLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLA 622



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 273/594 (45%), Gaps = 27/594 (4%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L K+L+     ++ V G  VH  I++ G +      N L+  Y+KCG       +F+ + 
Sbjct: 19  LLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAII 78

Query: 107 ERNLVSWTLIVSAAIQNGEFDMG---LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            +++VSW  +++   QNG        ++++ +M+    +PN + +  + K   S+ +   
Sbjct: 79  CKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTV 138

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G   H   +K+    + +V  S++  Y K G +     V+Y               G+  
Sbjct: 139 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAG-LKYLYMVYY---------------GFWL 182

Query: 224 CGYGFEAL--NVVSSMLF----EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           C Y  + L   + SS+ F    E  +   Y F   L   +      +GRQIHG+ +++ +
Sbjct: 183 C-YKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGL 241

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +++ NAL+ MY K   ++ A K+F+   D++ I+W+ +  G+S+N    +   LF +
Sbjct: 242 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSR 301

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +G +P+  T   +L  C  +  L  G QL    L  GF      T++L+ M+ + G 
Sbjct: 302 MFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 361

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A   FD +  +++  W  L+SGY  N  + + L  +  +  +G+  N  T   V++ 
Sbjct: 362 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 421

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C      ++  Q+HG  IK GF     I S+L   Y   G L++           D+ SW
Sbjct: 422 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNKDVVSW 481

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVI 576
            AM+S L H G   EA+ +F  ++  G +PD+     I+++C+  G  +R  S  H    
Sbjct: 482 NAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMSD 541

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           + G + +V   + ++D  ++ G +K  +   + +   + + ++  L+ A  +HG
Sbjct: 542 QFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCLWRILLSACKNHG 595



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 220/494 (44%), Gaps = 25/494 (5%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T + AL   S   +   GR +H  IIR+         N L++ Y K   +  A  +F  +
Sbjct: 18  TLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAI 77

Query: 308 ADKDVISWNTLFGGFSENKNPGQTAS---LFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             KDV+SWN+L  G+S+N     + +   LF +       PN  T + + +    L    
Sbjct: 78  ICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCT 137

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN--VSYKNITTWNELLSG 422
           +G Q   L +      +  V +SL+ M+C+ G ++  + V+    + YK      +L S 
Sbjct: 138 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG-LKYLYMVYYGFWLCYKKDVLRRQLKSS 196

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSS 481
            CF             + E   E +    F  V +   +     +G QIHG  +K G   
Sbjct: 197 ICF-------------LEEKEKESDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLG 243

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++L+  Y     L+ + +  + +   +  +W AM++     G + EA+ +F  + 
Sbjct: 244 FVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMF 303

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            AG KP EY +  +LN+C+ I      K +H F++KLGF   ++  +A++D YAK G + 
Sbjct: 304 SAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLA 363

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD      DV ++ +LI  Y  +    EA+ ++ +MK A + P+  T  SV+ AC
Sbjct: 364 DARKGFD-CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 422

Query: 662 SHKGLVDKGCLLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           S    ++ G  +   ++   +G++        L  M ++ G LED   V    P      
Sbjct: 423 SSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYTKCGSLEDGNLVFRRTP-NKDVV 479

Query: 721 VYRSLLSGCRIHGN 734
            + +++SG   +G 
Sbjct: 480 SWNAMISGLSHNGQ 493


>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 154/500 (30%), Positives = 261/500 (52%), Gaps = 5/500 (1%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G+Q+H  +I+      +S+ N ++ +Y+K    +   K+F+ M  K+V+SWNTL  G  E
Sbjct: 92  GKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151

Query: 325 NKNPGQTASL----FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
                    L    F + +L    PN +T + LLR   +L D+ +  QL C  L  GF  
Sbjct: 152 GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS 211

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V S+L+  + + G V+ A S FD VS +++  WN ++S Y  N         F  + 
Sbjct: 212 NCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMR 271

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             GV+ +  TF  ++ +C    +  +  Q+HG II+  F     + S+L+  Y     ++
Sbjct: 272 LEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++ +  +G    ++ SW  M+      G   EA+ +   ++     PDE  L +IL+SC 
Sbjct: 332 DARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELALASILSSCG 391

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + A      +H +V++ GF   + +A+A++ AY+KCG I  A  +F  S    D+I + 
Sbjct: 392 NLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF-SSVAEPDIISWT 450

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           +L+ AYA HGL  E +E+F+KM  +N++P +  F+ V+SAC+H G V +G   F  M + 
Sbjct: 451 SLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINV 510

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y + P  + Y C++D+L R G+L++A +++  MP +P      + L  C++H N  L  W
Sbjct: 511 YQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVHRNVGLARW 570

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
           ASEKL ++ P   A + L+S
Sbjct: 571 ASEKLFVMEPNEPANYSLMS 590



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 212/417 (50%), Gaps = 4/417 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F + +L +S  L     G Q+H H++KLG  N + LQN ++ +Y KC  F    ++FDEM
Sbjct: 75  FSSHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEM 134

Query: 106 AERNLVSWTLIVSAAIQ-NGEF---DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
             +N+VSW  ++   ++ N +F    +G   +  M      PN   +  +++  + +   
Sbjct: 135 PLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDV 194

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
                +HCF LK   + N FVG ++++ YAK G V  A+  F  +SS D+  WN M+  Y
Sbjct: 195 GICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCY 254

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A  G   +A  V   M  EG+  D +TF + +  C ++    +G+Q+HGLIIR   +  +
Sbjct: 255 ALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDV 314

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + +AL+DMY K+  ++ A K F+ M  K+++SW T+  G+ ++ +  +   L  + I  
Sbjct: 315 LVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRV 374

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            + P+ +  + +L  CG L      +Q+    +  GF    ++ ++L+  + +CG++  A
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSA 434

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
              F +V+  +I +W  L+  Y F+    + ++ F  +  S V  +   F  V+  C
Sbjct: 435 FQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSAC 491



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 179/398 (44%), Gaps = 7/398 (1%)

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L+   KL  L  G QL    +  G  +  ++ + +++++ +C        +FD +  KN+
Sbjct: 80  LKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139

Query: 414 TTWNELLSGYCFNCCDADVLKT----FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +WN L+ G     C   +++     F  +    +  N  T   ++       +  +  Q
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H  I+K+GF S  ++ S+L+ SY  FG +D +    +     D+  W  M+S     G 
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             +A  +F  +   G K D +   +++NSC  +G+    K +H  +I+L F+ +V VASA
Sbjct: 260 QGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+K  +I+ AR AFD     N ++ + T+I+ Y  HG   EAM +  +M      P
Sbjct: 320 LVDMYSKNENIEDARKAFDGMIVKN-IVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYP 378

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
            +    S++S+C +     +  +   +   + G +        LV   S+ G +  A   
Sbjct: 379 DELALASILSSCGNLSATSE-VVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
              +  +P    + SL+     HG  + G    EK+L 
Sbjct: 438 FSSVA-EPDIISWTSLMGAYAFHGLSKEGVEVFEKMLF 474



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 103/196 (52%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG I++L F  D+ + + L+ MYSK        + FD M  +N+VSWT ++    
Sbjct: 297 LGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYG 356

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G+    +++  +M      P+E A+ S++  C ++ A+     +H + ++   E    
Sbjct: 357 QHGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLS 416

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y+K G + +A + F S++  D+  W +++G YA  G   E + V   MLF  
Sbjct: 417 IANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSN 476

Query: 242 ITMDKYTFINALQGCS 257
           +  DK  F+  L  C+
Sbjct: 477 VRPDKVAFLGVLSACA 492



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +   D + LA  LS   NL +     QVH ++V+ GF   + + N L++ YSKCG  G  
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSA 434

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            + F  +AE +++SWT ++ A   +G    G++++  M  +   P++ A   V+  C   
Sbjct: 435 FQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHG 494

Query: 159 GASEFGYSIHCFALKIRI 176
           G    G  +H F L I +
Sbjct: 495 GFVLEG--LHYFNLMINV 510


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 314/626 (50%), Gaps = 4/626 (0%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M   G   ++     V+K+C        G  +H    K+  + + +VG ++L  Y   G 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQ 254
           +  A R+F  +   DV  WN +IG  +  G   EA N    M+    I  +  + I+ L 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
             + + D ++ R+IH   ++  ++  ++  NAL+D Y K   +   ++VF    +K+ +S
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN++  G +         + F   I +G++PN VT S +L    +L     G ++   ++
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   +  + +SLI M+ + G    A ++F N+  +NI +WN +++ Y  N    + ++
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
               + E+G   N  TF  V+  C R        +IH   ++ G +S  ++ +SLI  Y 
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYA 360

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G L ++    N   R D  S+  ++          +++ +F  +   G+KPD      
Sbjct: 361 KCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVG 419

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           ++++CA + A ++ K +H   ++    + ++V+++++D Y KCG I  A   F+Q     
Sbjct: 420 VISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL-FK 478

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           DV  +NT+I+ Y   G +  A+ +F+ M+   +Q    ++++V+SACSH GLV++G   F
Sbjct: 479 DVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYF 538

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             M +Q  ++P+   Y C+VD+L R G++E+A  +I+ +P  P   ++ +LL  CRI+GN
Sbjct: 539 SEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGN 597

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLS 760
            ELG  A+E L  L P++   ++LLS
Sbjct: 598 VELGRRAAEHLFELKPQHCGYYILLS 623



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 159/629 (25%), Positives = 291/629 (46%), Gaps = 6/629 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VHG + KLGF  D+++ N L+ +Y  CG+     R+FDEM ER++VSW  I+     
Sbjct: 29  GMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSV 88

Query: 123 NGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG++      Y  M     + PN  +V S++ +  ++   E    IHC+++K+ ++    
Sbjct: 89  NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVT 148

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++ Y K G V A  +VF      +   WN++I G A  G  ++ALN    M+  G
Sbjct: 149 TCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAG 208

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              +  T  + L     +  F  G++IHG  +R   E  I I N+LIDMY KS     A 
Sbjct: 209 AQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAS 268

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +  ++++SWN +   ++ N+ P +      +   +G  PN VTF+ +L  C +L 
Sbjct: 269 TIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLG 328

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L  G ++  + +  G   +  V++SLI M+ +CG +  A +VF N S K+  ++N L+ 
Sbjct: 329 FLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILII 387

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY         L  F  +   G + +  +F  V+  C      +   ++HG  ++    S
Sbjct: 388 GYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYS 447

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++ +SL+  Y   G++D +    N     D+ASW  M+      G    A+++F ++ 
Sbjct: 448 HLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMR 507

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +   + D      +L++C+  G  +R       ++           + ++D   + G ++
Sbjct: 508 DDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVE 567

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            A     Q   + D  ++  L+ A   +G V       +   L  L+P    +  ++S  
Sbjct: 568 EAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAE--HLFELKPQHCGYYILLSNI 625

Query: 662 -SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +  G  D+   + + M S+ G + +P C
Sbjct: 626 YAETGRWDEANKIRELMKSR-GAKKNPGC 653



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/544 (25%), Positives = 249/544 (45%), Gaps = 41/544 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ + + +   L +S  L+   +  ++H + VK+G  + +   N L+  Y KCG    
Sbjct: 106 SVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKA 165

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             +VF+E  E+N VSW  I++     G     L  +  M   G  PN   + S++ V V 
Sbjct: 166 LWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVE 225

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +   + G  IH F++++  E + F+  S+++ YAK G    A  +F+++   ++  WNAM
Sbjct: 226 LECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAM 285

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  YA      EA+  V  M   G   +  TF N L  C+ +     G++IH + +R  +
Sbjct: 286 IANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL 345

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              + + N+LIDMY K   +  A  VF   + KD +S+N L  G+SE  +  Q+ +LF +
Sbjct: 346 TSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQSLNLFSE 404

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             L G +P+ V+F  ++  C  L  L  G ++  +AL         V++SL+  + +CG 
Sbjct: 405 MRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGR 464

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +++A  +F+ + +K++ +WN ++ GY         +  F  + +  V+ +  ++  V+  
Sbjct: 465 IDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSA 524

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS- 516
           C            HG +++ G+    Y    L                   A+RL+    
Sbjct: 525 CS-----------HGGLVERGWQ---YFSEML-------------------AQRLEPTEM 551

Query: 517 -WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ--RTKSIHP 573
            +  M+  L   G   EA  +   L  A   PD  I G +L +C   G  +  R  + H 
Sbjct: 552 HYTCMVDLLGRAGFVEEAAKLIQQLPIA---PDANIWGALLGACRIYGNVELGRRAAEHL 608

Query: 574 FVIK 577
           F +K
Sbjct: 609 FELK 612



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 184/389 (47%), Gaps = 3/389 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D+  + + + ++  L +   L+    G ++HG  +++G   DIF+ N+LI MY+K G+  
Sbjct: 206 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHST 265

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F  +  RN+VSW  +++    N      ++  + M+  G  PN     +V+  C 
Sbjct: 266 EASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACA 325

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G    G  IH   ++I +  + FV  S+++ YAK G + +A  VF +   D+V  +N 
Sbjct: 326 RLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVS-YNI 384

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I GY+      ++LN+ S M   G   D  +F+  +  C+ +A    G+++HG+ +R+ 
Sbjct: 385 LIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNH 444

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +   + + N+L+D Y K   +D A ++F ++  KDV SWNT+  G+          S+F 
Sbjct: 445 LYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFE 504

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
                  + + V++  +L  C     ++ G Q     L       E   + ++ +  R G
Sbjct: 505 AMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAG 564

Query: 397 AVEMAHSVFDNVSY-KNITTWNELLSGYC 424
            VE A  +   +    +   W  LL G C
Sbjct: 565 FVEEAAKLIQQLPIAPDANIWGALL-GAC 592


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/531 (29%), Positives = 273/531 (51%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ LI+  + S    G+ YA  VFE + + +++ WNT+F G 
Sbjct: 19  RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C K      G Q+    L  G+  + 
Sbjct: 79  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 138

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSY-------------------------------K 411
            V +SLI M+ + G +E A  VFD  S+                               K
Sbjct: 139 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 198

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN ++SGY     + + L+ F  + ++ V  +  T   VV  C +S + ++  Q+H
Sbjct: 199 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 258

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF S   I ++LI  Y+  G+++ +     G    D+ SW  ++    H     
Sbjct: 259 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 318

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P++  + +IL +CA +GA +  + IH ++ K   G        ++
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A+  FD   N + +  +N +I  +A HG  + A +IF +M+   ++P
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRS-LSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEP 437

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L  +G  ++A+ +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M  +P   ++ SLL  C+++ N ELGE  ++ L+ + PKN  ++VLLS
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLS 548



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 210/448 (46%), Gaps = 36/448 (8%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMA 106
           SLSL  N K+      +H  ++K G  N  +  + LI       +F    + + VF+ + 
Sbjct: 5   SLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E NL+ W  +      + +    L +YV M + G +PN +    ++K C    A   G  
Sbjct: 65  EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQ 124

Query: 167 IHCFALKIRIEKNPFVGCSVLNFY-------------------------------AKLGD 195
           IH   LK+  + + +V  S+++ Y                               A  G 
Sbjct: 125 IHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGY 184

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +A+A+++F  I   DV  WNAMI GYA  G   EAL +   M+   +  D+ T ++ +  
Sbjct: 185 IASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSA 244

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+  A  ++GRQ+H  I       ++ IVNALID+YIK   ++ A  +FE ++ KDVISW
Sbjct: 245 CAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISW 304

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--A 373
           NTL GG++      +   LF + + SG  PN VT   +L  C  L  +++G  +      
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 364

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G  +  +  +SLI M+ +CG +E A  VFD++  +++++WN ++ G+  +       
Sbjct: 365 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRS 461
             F  + ++ +E +  TF  ++  C  S
Sbjct: 425 DIFSRMRKNEIEPDDITFVGLLSACSHS 452



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 166/357 (46%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAM----------------- 88
           FL KS + S+  +    G Q+HGH++KLG+  D+++  +LI+M                 
Sbjct: 108 FLLKSCAKSKAFRE---GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164

Query: 89  --------------YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                         Y+  GY     ++FDE+  +++VSW  ++S   + G     L+++ 
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + SV+  C    + E G  +H +        N  +  ++++ Y K G
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G + +  T ++ L 
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   +IGR IH  I +    V  + S   +LIDMY K   ++ A +VF+ + ++ +
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +        +F +   +   P+ +TF  LL  C     LDLG  +
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 11/249 (4%)

Query: 30  GNNQFCSDSF-------LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQ 82
           GNN+   + F       +R D   +   +S      S  LG QVH  I   GF +++ + 
Sbjct: 214 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI +Y KCG       +F+ ++ ++++SW  ++        +   L ++ +M  +G  
Sbjct: 274 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG---CSVLNFYAKLGDVAAA 199
           PN+  + S++  C  +GA E G  IH +  K R++          S+++ YAK GD+ AA
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINK-RLKGVANASSHRTSLIDMYAKCGDIEAA 392

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           ++VF SI +  +  WNAMI G+A  G    A ++ S M    I  D  TF+  L  CS  
Sbjct: 393 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 452

Query: 260 ADFDIGRQI 268
              D+GR I
Sbjct: 453 GMLDLGRHI 461



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 34/285 (11%)

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYV---NFGQLDNSFEFSNGAERLDMASWGAMM 521
           Q +  IH  +IKTG  +  Y  S LI+  V   +F  L  +       +  ++  W  M 
Sbjct: 16  QSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 75

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
                      A+ ++  ++  G  P+ Y    +L SCA   A++  + IH  V+KLG++
Sbjct: 76  RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 135

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN--------------------------- 614
            ++YV +++I  Y + G ++ AR  FDQS + +                           
Sbjct: 136 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 195

Query: 615 ---DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              DV+ +N +I  YA  G   EA+E+F +M   N++P ++T VSV+SAC+    ++ G 
Sbjct: 196 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 255

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
            +   +D  +G   +      L+D+  + G +E A  + E + ++
Sbjct: 256 QVHSWID-DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK 299


>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
 gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 180/710 (25%), Positives = 337/710 (47%), Gaps = 13/710 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++ LG   D+ L + ++  Y+  G        F      +L  W  ++    + G
Sbjct: 64  KLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFLNDDLAQWNSVIVDIFRAG 123

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + +Y  +K      +E  V   +K C  +     G  +H  +LK+ + ++ FVG 
Sbjct: 124 YPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKGMHADSLKLGLNRDKFVGS 183

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC--GYGFEALNVVSSMLFEGI 242
           S++  Y+KL  +  +++ F  I   D+  + +MI GY+       + A  + S M    +
Sbjct: 184 SLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNAFEIASDMSQSNL 243

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAF 301
            +++ T ++ LQ    +     G+ +H    R  +  S  ++  +L+ MY++      A 
Sbjct: 244 EVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDEVLGTSLVHMYMQCGAYQLAS 303

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF--ILSGSR--PNHVTFSILLRQC 357
              + +  + V SWN +  G       GQ+ +  H F  +L   +  P+ VT++ L+  C
Sbjct: 304 ASLKNLV-QSVASWNAMLAGLVR---TGQSGNAIHHFSVMLHEHKVVPDSVTYANLISAC 359

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +L +      +    +      +  + ++LI ++ +C  +  +  +FD +  K++ ++N
Sbjct: 360 AELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYMKCTRIMSSKHLFDQLVVKDLVSYN 419

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++ GY  N    + +     +    V  N  T   ++      ++      IHG  I+ 
Sbjct: 420 TMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKDFVRGRWIHGFSIRH 479

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           GF S   I + +I+ Y   G++ ++       E+ ++ SW  MM   +  GH  E V +F
Sbjct: 480 GFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFCGHGGETVELF 539

Query: 538 HSLVEA-GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
             L++  G KPD   + T + + + +G  +  K IH FV +     +    +++I AYAK
Sbjct: 540 QLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAK 599

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG +  +   F  S    D+  +N++I AY  HG  ++ +E+F  M+  N+ P   TF S
Sbjct: 600 CGRLDLSVGLF-LSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTFSS 658

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SACSH GL+ +G  +F+SM S Y + P  + YGC+VD+LSR G+LE+   +I++    
Sbjct: 659 VLSACSHAGLIKEGLHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEEGYKLIKLSTLN 718

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQR 766
              +V  +LLS CR +GN  LG+  S +LL L  +N   + L+S+   Q+
Sbjct: 719 DKSSVLCALLSACRTYGNTMLGQVISNELLELGQQNPGTYALISEVFAQK 768



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/523 (23%), Positives = 249/523 (47%), Gaps = 8/523 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L++ +LG  +H   +KLG   D F+ ++L+ +YSK    G   + F+E+ ++++VS+T +
Sbjct: 157 LRNLLLGKGMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSM 216

Query: 117 VSAAIQNGEFDM--GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++   +N +       ++  DM  +    N   + S+++V  ++GA   G S+HC++ + 
Sbjct: 217 ITGYSENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRR 276

Query: 175 RIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
            I   +  +G S+++ Y + G    A     ++    V  WNAM+ G    G    A++ 
Sbjct: 277 GIGVSDEVLGTSLVHMYMQCGAYQLASASLKNL-VQSVASWNAMLAGLVRTGQSGNAIHH 335

Query: 234 VSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
            S ML E  +  D  T+ N +  C+ + +      +H  +IR  +   + +  ALI++Y+
Sbjct: 336 FSVMLHEHKVVPDSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYM 395

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K + +  +  +F+++  KD++S+NT+  G+ +N    +  +L  + +     PN VT   
Sbjct: 396 KCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILS 455

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           LL       D   G  +   ++  GF    ++ + +I M+  CG +  A ++F ++  KN
Sbjct: 456 LLAAIADHKDFVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKN 515

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           + +W  ++ G  F     + ++ F  + +  G + +  T    ++      + + V QIH
Sbjct: 516 LISWTVMMMGCLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIH 575

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             + +          +SLI +Y   G+LD S       E  D+ SW +M+SA    G   
Sbjct: 576 CFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYT 635

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           + + +F  + E    PD     ++L++C+  G  +  + +H F
Sbjct: 636 KVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIK--EGLHIF 676



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 158/365 (43%), Gaps = 2/365 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A  +S    L +      VH ++++     D+ L   LI +Y KC        +F
Sbjct: 348 DSVTYANLISACAELCNSGYAASVHAYLIRRSIPLDVVLATALIEVYMKCTRIMSSKHLF 407

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D++  ++LVS+  ++   +QNG  +  + +  +M      PN   + S++          
Sbjct: 408 DQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKDFV 467

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH F+++     N  +   ++  Y+  G + +A  +F S+   ++  W  M+ G  
Sbjct: 468 RGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMGCL 527

Query: 223 HCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
            CG+G E + +   ++ + G   D  T + A+Q  S +      +QIH  + R+ +E   
Sbjct: 528 FCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDT 587

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
             +N+LI  Y K   +D +  +F  +  +D+ SWN++   +  +    +   +F      
Sbjct: 588 KTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEG 647

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              P+ +TFS +L  C     +  GL + Q +      L +E     ++ +  R G +E 
Sbjct: 648 NINPDGLTFSSVLSACSHAGLIKEGLHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEE 707

Query: 401 AHSVF 405
            + + 
Sbjct: 708 GYKLI 712


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 302/649 (46%), Gaps = 65/649 (10%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E N      ++N YAK G ++ AE +F  +   DV  WN ++ GY       + L    S
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVS 127

Query: 237 MLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           M   G ++ + +TF   ++ C  +   ++  Q+ GL  + +      +  AL+DM+++  
Sbjct: 128 MHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCG 187

Query: 296 -------------------------------GMDYAFKVFERMADKDVISWNTLFGGFSE 324
                                          G+D+A + FE MA++DV+SWN +    S+
Sbjct: 188 YVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQ 247

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           +    +   L  +    G R +  T++  L  C +L  L  G QL    +      +  V
Sbjct: 248 SGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV 307

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            S+LI ++ +CG+ + A  VF+++  +N  +W  L+ G     C +  ++ F  +    +
Sbjct: 308 ASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 367

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYI----- 485
            ++      ++  C    +  +  Q+H   +K+G              ++ CG +     
Sbjct: 368 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 427

Query: 486 ------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
                        +S+I +Y   G +  + EF +G    +  +W AM+ A +  G   + 
Sbjct: 428 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 487

Query: 534 VTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           + ++ +++   +  PD     T+   CA IGA +    I    +K G    V VA+A I 
Sbjct: 488 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 547

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG I  A+  FD   N  DV+ +N +I  Y+ HG+  +A + FD M     +P   
Sbjct: 548 MYSKCGRISEAQKLFDL-LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYI 606

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           ++V+V+S CSH GLV +G L F  M   +G+ P  + + C+VD+L R G+L +AK +I+ 
Sbjct: 607 SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDK 666

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           MP +P+  V+ +LLS C+IHGN EL E A++ +  L   +  +++LL+K
Sbjct: 667 MPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAK 715



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 170/722 (23%), Positives = 288/722 (39%), Gaps = 105/722 (14%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV------------------------ 101
           +HG +V +G  + +FLQN L+  Y  CG      R+                        
Sbjct: 26  LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 85

Query: 102 --------FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVM 152
                   FD M  R++ SW  ++S   Q   F  GL+ +V M  +G  +PN F    VM
Sbjct: 86  SLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVM 145

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNP---------FVGCSVLNF-------------- 189
           K C ++G  E    +     K     +P         FV C  ++F              
Sbjct: 146 KSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 205

Query: 190 --------YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
                   YAKL  +  A   F  ++  DV  WN MI   +  G   EAL +V  M  +G
Sbjct: 206 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 265

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  T+ ++L  C+ +     G+Q+H  +IRS  +    + +ALI++Y K      A 
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 325

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF  + D++ +SW  L GG  + +   ++  LF++        +    + L+  C   +
Sbjct: 326 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV----------------- 404
           DL LG QL  L L  G      V++SLI ++ +CG ++ A  V                 
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 405 --------------FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGC 449
                         FD ++ +N  TWN +L  Y  +  + D LK +  +  +  V  +  
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFS 506
           T+  +   C      ++  QI G  +K G      + ++ I  Y   G++  +   F+  
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           NG    D+ SW AM++     G   +A   F  ++  G KPD      +L+ C+  G  Q
Sbjct: 566 NGK---DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQ 622

Query: 567 RTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
             K     + ++ G +  +   S ++D   + G +  A+   D+        V+  L+ A
Sbjct: 623 EGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
              HG   E  E+  K       P   +++ +    S  G  D    + K M  + G++ 
Sbjct: 683 CKIHG-NDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDK-GIKK 740

Query: 686 SP 687
           +P
Sbjct: 741 NP 742



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 34/417 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + LI +Y+KCG F    
Sbjct: 266 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 325

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF+ + +RN VSWT+++  ++Q   F   ++++  M+      ++FA+ +++  C +  
Sbjct: 326 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 385

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG------- 212
               G  +H   LK    +   V  S+++ YAK GD+  AE VF S+S  D+        
Sbjct: 386 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 445

Query: 213 ------------------------CWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
                                    WNAM+G Y   G   + L + S+ML +  +T D  
Sbjct: 446 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 505

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  +++ +  ++S+ NA I MY K   +  A K+F+ +
Sbjct: 506 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG- 366
             KDV+SWN +  G+S++    Q A  F   +  G++P+++++  +L  C     +  G 
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
           L    +    G        S ++ +  R G +  A  + D +  K     W  LLS 
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 682



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 38/211 (18%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L   L SC + GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR       
Sbjct: 7   LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 66

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ----------------------- 648
              +VI +N ++  YA  G +S+A E+FD+M   ++                        
Sbjct: 67  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 649 ---------PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
                    P+  TF  VM +C   G  +    L   +  ++     PD    LVDM  R
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL-GLFWKFDFWGDPDVETALVDMFVR 185

Query: 700 NGYLEDAKHVIEIMPFQPSPTVY--RSLLSG 728
            GY++ A  +   +     PT++   S+L+G
Sbjct: 186 CGYVDFASRLFSQI---ERPTIFCRNSMLAG 213


>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
 gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
          Length = 804

 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 183/639 (28%), Positives = 316/639 (49%), Gaps = 28/639 (4%)

Query: 129 GLKMYVDMKTNGFMP---NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC- 184
            L++Y  +      P   + +   + +  C        G S+H   L+ R    P     
Sbjct: 86  ALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHMLR-RARSLPDTAVL 144

Query: 185 --SVLNFYA-----KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
             S+LN YA     +   V    R+F ++   +V  WN + G Y   G   EAL +   M
Sbjct: 145 RNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRM 204

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSS 295
           L +G      +F+N     ++  D     Q++GL+++  VE    + +V++ IDM+ +  
Sbjct: 205 LEDGFRPTPVSFVNIFP-AAVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFG 263

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILL 354
            +  A +VF+R A K+   WNT+  G+ +N    +   LF K + S   P + VTF   L
Sbjct: 264 DVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSAL 323

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKN 412
               +  D+ LG QL    +  G      V   ++L+ M+ RCG V+ A  +FD +  K+
Sbjct: 324 TAASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKD 382

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I TWN +++ +  N  D + L     + +SG   +  T   V+     + + Q+  Q HG
Sbjct: 383 IVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHG 442

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGH 529
            +I+ G    G + S LI  Y   G+++ +   F+    A+R D  +W AM++     G 
Sbjct: 443 YLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKR-DEVTWNAMIAGYTQSGQ 500

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVAS 588
             +A+ +F +++EAG +P    L ++L +C  +G      K IH F ++   +T V+V +
Sbjct: 501 PEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGT 560

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           A+ID Y+KCG+I  A   F         + Y T+I     HG   +A+ +F+ M+   L+
Sbjct: 561 ALIDMYSKCGEITTAENVFG-GMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 619

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P   TF+S +SAC++ GLVD+G  L++SMDS +G+  +P  + C+ D+L++ G +E+A  
Sbjct: 620 PDAVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAYE 678

Query: 709 VIEIMPFQPS-PTVYRSLLSGCRIHGNKELGEWASEKLL 746
            IE +  + +   ++ SLL+ C+  G +EL +  ++KLL
Sbjct: 679 FIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLL 717



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 263/554 (47%), Gaps = 20/554 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGL-----RVFDEMAERNLVSWTLIVS 118
           VH H+++      +   L+N+L+ +Y+    +         R+FD M +RN+VSW  +  
Sbjct: 127 VHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFG 186

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE- 177
             ++ G     L+++V M  +GF P   +  ++    V+   S + + ++   +K  +E 
Sbjct: 187 WYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPS-WPFQLYGLLVKYGVEY 245

Query: 178 -KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             + FV  S ++ +++ GDV +A RVF   +  +   WN MI GY   G   EA+++ S 
Sbjct: 246 INDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSK 305

Query: 237 ML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKS 294
           +L    + +D  TF++AL   S   D  +G+Q+HG +I+       + + NAL+ MY + 
Sbjct: 306 ILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRC 365

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  AF +F+R+ +KD+++WNT+   F +N    +   L ++   SG   + VT + +L
Sbjct: 366 GNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVL 425

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI- 413
                  DL +G Q     +  G ++ E + S LI M+ + G VEMA  VFD  S+KN  
Sbjct: 426 SASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFD--SFKNAK 482

Query: 414 ---TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-Q 469
               TWN +++GY  +      +  F  + E+G+E    T   V+  C         G Q
Sbjct: 483 RDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQ 542

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   ++    +  ++ ++LI  Y   G++  +     G       ++  M+S L   G 
Sbjct: 543 IHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGF 602

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             +A+ +F+S+ E G KPD     + +++C   G      +++  +   G +        
Sbjct: 603 GKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCC 662

Query: 590 VIDAYAKCGDIKGA 603
           V D  AK G ++ A
Sbjct: 663 VADLLAKAGRVEEA 676



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 231/489 (47%), Gaps = 14/489 (2%)

Query: 65  QVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q++G +VK G  + ND+F+ ++ I M+S+ G      RVFD  A++N   W  +++  +Q
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFALKIRIEKN 179
           NG+F   + ++  +  +  +P    V + +    +   S+    G  +H + +K      
Sbjct: 293 NGQFSEAIDLFSKILGSREVP--LDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTL 350

Query: 180 PFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           P + G +++  Y++ G+V  A  +F  +   D+  WN M+  +    +  E L +V  M 
Sbjct: 351 PVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQ 410

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G   D  T    L   S   D  IG+Q HG +IR  +E    + + LIDMY KS  ++
Sbjct: 411 KSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVE 469

Query: 299 YAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            A +VF+  + A +D ++WN +  G++++  P +   +F   + +G  P  VT + +L  
Sbjct: 470 MAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPA 529

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C  +   +  G Q+ C A+         V ++LI M+ +CG +  A +VF  ++ K+  T
Sbjct: 530 CDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVT 589

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +  ++SG   +      L  F ++ E G++ +  TF   +  C  S        ++ ++ 
Sbjct: 590 YTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD 649

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEA 533
             G S+       +       G+++ ++EF    G E   +A WG+++++   QG    A
Sbjct: 650 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 709

Query: 534 VTIFHSLVE 542
             +   L++
Sbjct: 710 KLVTKKLLD 718



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 9/386 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           D +    +L+ +   +   LG Q+HG+++K +  T  + L N L+ MYS+CG       +
Sbjct: 315 DVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDL 374

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           FD + E+++V+W  +V+A IQN +FD+ GL +  +M+ +GF  +   + +V+    + G 
Sbjct: 375 FDRLPEKDIVTWNTMVTAFIQN-DFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGD 433

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            + G   H + ++  IE    +   +++ YAK G V  A+RVF S   +  D   WNAMI
Sbjct: 434 LQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMI 492

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADFDIGRQIHGLIIRSEV 277
            GY   G   +A+ V  +ML  G+     T  + L  C  V      G+QIH   +R  +
Sbjct: 493 AGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCL 552

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ +  ALIDMY K   +  A  VF  M  K  +++ T+  G  ++    +  +LF+ 
Sbjct: 553 DTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNS 612

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +P+ VTF   +  C     +D GL L       G          +  +  + G 
Sbjct: 613 MQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGR 672

Query: 398 VEMAHSVFDNVSYKN--ITTWNELLS 421
           VE A+   + +  +   +  W  LL+
Sbjct: 673 VEEAYEFIEGLGEEGNFVAIWGSLLA 698



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 160/326 (49%), Gaps = 20/326 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L   LS S N     +G Q HG++++ G   +  L++ LI MY+K G      RVF
Sbjct: 417 DSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVF 475

Query: 103 DEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           D    A+R+ V+W  +++   Q+G+ +  + ++  M   G  P    + SV+  C  +G 
Sbjct: 476 DSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGG 535

Query: 161 SEF-GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IHCFA++  ++ N FVG ++++ Y+K G++  AE VF  ++      +  MI 
Sbjct: 536 GVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMIS 595

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH------GLII 273
           G    G+G +AL + +SM  +G+  D  TF++A+  C+     D G  ++      G+  
Sbjct: 596 GLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISA 655

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD--VISWNTLFGGFSENKNPGQT 331
             +  C ++      D+  K+  ++ A++  E + ++   V  W +L     + +   + 
Sbjct: 656 TPQHHCCVA------DLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS-CKAQGKQEL 708

Query: 332 ASLFHKFILSGSRP-NHVTFSILLRQ 356
           A L  K +L   +   H  +S+LL Q
Sbjct: 709 AKLVTKKLLDIEKQYGHAGYSVLLSQ 734


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 277/536 (51%), Gaps = 13/536 (2%)

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +ML EG  +    ++  L  C         R +HG + ++     + +  +L++ Y++ S
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCS 127

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A ++F+ M +++V++W  L  G++ N  P     +F + +  G  P+H T    L 
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    D+DLG Q+   A+  G     ++ +SL  ++ + G+++ A   F  +  KN+ T
Sbjct: 188 ACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 247

Query: 416 WNELLSGYCFNC-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           W  ++S    +  C    +  F ++   GV  N  T   V+  C    +  +  Q+    
Sbjct: 248 WTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA----------- 523
            K G  +   + +S +  Y+  G+ D +       E   + +W AM+S            
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L  +    +A+TIF  L  +  KPD +   +IL+ C+A+ A ++ + IH   IK GF ++
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V V SA+++ Y KCG I+ A  AF +   +   + + ++I  Y+ HG   EA+++F++M+
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLE-MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           LA ++P++ TFVS++SACS+ GLV++    F  M  +Y ++P  D YGC++DM  R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           EDA   I+   F+P+  ++ SL++GCR HGN EL  +A++KLL L PK    ++LL
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILL 602



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 208/405 (51%), Gaps = 12/405 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHGH+ K G + D+F+  +L+  Y +C       R+FD M ERN+V+WT +V+    N +
Sbjct: 100 VHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             +GL+++V+M   G  P+ + +G+ +  C++    + G  +H +A+K   E    +G S
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE-ALNVVSSMLFEGITM 244
           + + YAKLG + +A R F+ I   +V  W  MI   A      E  +++   ML +G+  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMP 279

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  + +  C    D ++G+Q+     +   E ++ + N+ + +Y++    D A ++F
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLF 339

Query: 305 ERMADKDVISWNTLFGGFSENKNPG-----------QTASLFHKFILSGSRPNHVTFSIL 353
           E+M D  +I+WN +  G+++  +             Q  ++F     S  +P+  TFS +
Sbjct: 340 EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSI 399

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  ++ L+ G Q+    +  GFL +  V S+L+ M+ +CG ++ A+  F  +  +  
Sbjct: 400 LSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTF 459

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            TW  ++SGY  +    + ++ F  +  +GV  N  TF  ++  C
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC 504



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 189/384 (49%), Gaps = 32/384 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG+ +K G  +   + N+L ++Y+K G     LR F  + E+N+++WT ++SA  
Sbjct: 197 LGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACA 256

Query: 122 QNGE-FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++ E  ++G+ +++DM  +G MPNEF + SVM +C +      G  +  F+ KI  E N 
Sbjct: 257 EDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFE 229
            V  S +  Y + G+   A R+F  +    +  WNAMI GYA               GF+
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +   +    +  D +TF + L  CS +   + G QIH   I+S     + + +AL++
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVN 436

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  A K F  M  +  ++W ++  G+S++  P +   LF +  L+G RPN +T
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEIT 496

Query: 350 FSILLRQC--GKLLD-----LDLGLQLQCLAL---HCGFLDEENVTSSLIYMFCRCGAVE 399
           F  LL  C    L++      D+  +  C+     H G          +I MF R G VE
Sbjct: 497 FVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG---------CMIDMFVRLGRVE 547

Query: 400 MAHSVFDNVSYK-NITTWNELLSG 422
            A S      ++ N   W+ L++G
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAG 571



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 239/524 (45%), Gaps = 26/524 (4%)

Query: 147 AVGSVMKV-----CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
           AV S M V     CV  G+     ++H    K     + FV  S++N Y +      A R
Sbjct: 75  AVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARR 134

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           +F  +   +V  W A++ GY         L V   ML  G     YT    L  C    D
Sbjct: 135 LFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD 194

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            D+G+Q+HG  I+   E   S+ N+L  +Y K   +D A + F R+ +K+VI+W T+   
Sbjct: 195 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA 254

Query: 322 FSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            +E++   +   SLF   ++ G  PN  T + ++  CG  LDL+LG Q+Q  +   G   
Sbjct: 255 CAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET 314

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADV------ 432
              V +S +Y++ R G  + A  +F+ +   +I TWN ++SGY    +    D+      
Sbjct: 315 NLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRG 374

Query: 433 ---LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  F ++  S ++ +  TF  ++  C      +   QIH   IK+GF S   + S+L
Sbjct: 375 FQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 434

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G + ++ +           +W +M+S     G   EA+ +F  +  AG +P+E
Sbjct: 435 VNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE 494

Query: 550 YILGTILNSCAAIGAYQRTKSIHPF-VIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMA 606
               ++L++C+  G  +  +  H F ++K  +  E  V     +ID + + G ++ A   
Sbjct: 495 ITFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552

Query: 607 FDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
             ++ F  N+ I +++L+     HG +  A    D  KL  L+P
Sbjct: 553 IKRTGFEPNEAI-WSSLVAGCRSHGNMELAFYAAD--KLLELKP 593



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 14/191 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+   + +   G Q+H   +K GF +D+ + + L+ MY+KCG    
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R  V+WT ++S   Q+G+    ++++ +M+  G  PNE    S++  C  
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 158 MGASEFGYSIHCF-ALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS----SD 209
            G  E   + H F  +K      P V   GC +++ + +LG V   E  F  I       
Sbjct: 507 AGLVE--EAEHYFDMMKKEYCIEPVVDHYGC-MIDMFVRLGRV---EDAFSFIKRTGFEP 560

Query: 210 DVGCWNAMIGG 220
           +   W++++ G
Sbjct: 561 NEAIWSSLVAG 571


>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
 gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
          Length = 644

 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 301/636 (47%), Gaps = 47/636 (7%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIGG 220
           G  IH    +    ++P VG  ++  Y K G +  A +VFY +   S  ++  W A+I  
Sbjct: 14  GRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTALIAA 73

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YA  G    A+ +   M  EG + D+ T +   + C    + + G++IH  +      C+
Sbjct: 74  YARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAYL-----SCN 128

Query: 281 ISIV--NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
             +V  ++LI MY K   +  A  +F+ M + + ++WN+L G F ++        L+ + 
Sbjct: 129 SDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELYWEM 188

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
           +  G  P+  TF  +L     L  L  G  +    +  G  D+  V ++L+ M+ +CG+V
Sbjct: 189 LQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSV 248

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVET 457
             A  VFD +   ++  W+ ++S +  NC +  + L+ F  +   G   N  T   V+  
Sbjct: 249 VEAVEVFDRMPRHDVILWSAVISAH-VNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSA 307

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE------------- 504
           C   +  +    IH  +++ G+     + ++++  Y   G L+++++             
Sbjct: 308 CEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPI 367

Query: 505 --------------------FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
                               F + AER D  +W  MMS      H  +++ +F  +++ G
Sbjct: 368 GNALISMYGRCGSFGKARDLFDSMAER-DAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEG 426

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
             PD+  + T+LN CA++ A Q  K+I  ++     +    + +A+++ YAKCG    AR
Sbjct: 427 TPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEAR 486

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F       D + +N LI AY  +     A +IF  M+L    P   TF +++S CSH 
Sbjct: 487 RIFS-VMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHG 545

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GL+ +    F+ M   Y ++     YGC+VD+L R G + +A+ V E MP    P V+ +
Sbjct: 546 GLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTT 605

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C++HG  + G+ A+E+L+ L P+  +A+V+LS
Sbjct: 606 LLSACQVHGETQRGKRAAERLVELDPEVTSAYVVLS 641



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/638 (23%), Positives = 266/638 (41%), Gaps = 41/638 (6%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWT 114
           K    G Q+H  I +     D  + N LI MY KCG      +VF ++ E    NLV+WT
Sbjct: 9   KDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWT 68

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            +++A  +NG+  + ++++  M+  G  P+   + ++ + C +    E G  IH +   +
Sbjct: 69  ALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAY---L 125

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               +  +G S++  Y K G ++ A  +F S+   +   WN+++G +        A+ + 
Sbjct: 126 SCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELY 185

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML  G    + TF+  L   S +     G+ +H  ++ +  E  + +  AL++MY K 
Sbjct: 186 WEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKC 245

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A +VF+RM   DVI W+ +           ++  LF K  L G+RPN+VT   +L
Sbjct: 246 GSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVL 305

Query: 355 RQC--------GKLL-----------DLDLGLQLQCLALHCGFLDEE------------- 382
             C        GK +           DL +G  +  +   CG L++              
Sbjct: 306 SACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGV 365

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            + ++LI M+ RCG+   A  +FD+++ ++  TWN ++S         D ++ F  + + 
Sbjct: 366 PIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQE 425

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G   +  T   V+  C      Q    I   +  T  S+   I ++++  Y   G  D +
Sbjct: 426 GTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEA 485

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
               +  +  D  SW A++ A         A  IF ++   G  PD     TIL+ C+  
Sbjct: 486 RRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHG 545

Query: 563 GAY-QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           G   +  K             E      ++D   + G +  A    ++     D IV+ T
Sbjct: 546 GLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTT 605

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           L+ A   HG         +  +L  L P   +   V+S
Sbjct: 606 LLSACQVHGETQRGKRAAE--RLVELDPEVTSAYVVLS 641



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 131/598 (21%), Positives = 244/598 (40%), Gaps = 72/598 (12%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI 86
           RL    Q   +S  R   + + ++    ENL+    G ++H +   L   +D+ L ++LI
Sbjct: 85  RLFQQMQLEGNSPDRITLVTIFEACGNPENLED---GKKIHAY---LSCNSDVVLGSSLI 138

Query: 87  AMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEF 146
            MY KCG       +F  M E N V+W  ++ A +Q+   +  +++Y +M   GF+P+  
Sbjct: 139 TMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRVEAAMELYWEMLQCGFLPSRP 198

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
              +V+    S+ +   G  +H   ++   E +  V  +++N Y K G V  A  VF  +
Sbjct: 199 TFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRM 258

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              DV  W+A+I  + +C    E+L +   M  EG   +  T ++ L  C      + G+
Sbjct: 259 PRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGK 318

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER-------------------- 306
            IH  ++ +  E  + + NA++ MY K   ++ A+ VF R                    
Sbjct: 319 GIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRC 378

Query: 307 ------------MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
                       MA++D ++WNT+     + ++   +  LF + +  G+ P+ VT   +L
Sbjct: 379 GSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVL 438

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L  L  G  +     H      + + ++++ M+ +CG+ + A  +F  +  ++  
Sbjct: 439 NVCASLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAV 498

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN L+  Y          + F  +   G   +  TF  ++  C            HG +
Sbjct: 499 SWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCS-----------HGGL 547

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +                 +  + + D   E   G        +G ++  L   G   EA 
Sbjct: 548 LGEAV------------KWFRWMREDYYVEAETG-------HYGCIVDLLGRLGRVPEAE 588

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVI 591
            +   +  AG  P   +  T+L++C   G  QR K     +++L    T  YV  + I
Sbjct: 589 EVAEKM-PAGTDP--IVWTTLLSACQVHGETQRGKRAAERLVELDPEVTSAYVVLSTI 643



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 209/468 (44%), Gaps = 11/468 (2%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ CS   D   GRQIH  I RS       + N LI MY+K   +  A +VF ++ +  V
Sbjct: 2   LRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSV 61

Query: 313 ---ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
              ++W  L   ++ N        LF +  L G+ P+ +T   +   CG   +L+ G ++
Sbjct: 62  VNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKKI 121

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
               L C    +  + SSLI M+ +CG++  A  +F ++   N   WN L+  +  +   
Sbjct: 122 HAY-LSCN--SDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQHDRV 178

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              ++ +  + + G   +  TF  V+      E+ +    +H  +++ G      + ++L
Sbjct: 179 EAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQTAL 238

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G +  + E  +   R D+  W A++SA V+     E++ +F  +   G +P+ 
Sbjct: 239 VNMYGKCGSVVEAVEVFDRMPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNN 298

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             L ++L++C    A +  K IH  V++ G+  ++ V +A++  Y KCG ++ A   F +
Sbjct: 299 VTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHR 358

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
               N V + N LI  Y   G   +A ++FD M     +    T+ ++MS          
Sbjct: 359 VPRRNGVPIGNALISMYGRCGSFGKARDLFDSMA----ERDAVTWNTMMSVSEQLEHGRD 414

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
              LF+ M  Q G  P       ++++ +    L++ K +   +   P
Sbjct: 415 SIQLFRQM-LQEGTPPDKVTILTVLNVCASLPALQEGKAICAWLDHTP 461



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 14/381 (3%)

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV---S 409
           LLRQC +  DL  G Q+           +  V + LI M+ +CG++  A  VF  +   S
Sbjct: 1   LLRQCSRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETS 60

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             N+  W  L++ Y  N      ++ F  +   G   +  T   + E C   EN +   +
Sbjct: 61  VVNLVAWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDGKK 120

Query: 470 IHGAIIKTGFSSCG---YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           IH       + SC     + SSLI  Y   G L  +       E  +  +W ++M A V 
Sbjct: 121 IH------AYLSCNSDVVLGSSLITMYGKCGSLSEACLMFQSMEEWNTVAWNSLMGAFVQ 174

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
                 A+ ++  +++ G  P      T+L + +++ + +  K +H  +++ G   +V V
Sbjct: 175 HDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVV 234

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A+++ Y KCG +  A   FD+    +DVI+++ +I A+ +     E++ +F KM+L  
Sbjct: 235 QTALVNMYGKCGSVVEAVEVFDR-MPRHDVILWSAVISAHVNCAEYEESLRLFRKMQLEG 293

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
            +P+  T VSV+SAC     ++ G  + + +  + G +        +V M  + G LEDA
Sbjct: 294 NRPNNVTLVSVLSACEGPQALETGKGIHECV-VEAGYEGDLIVGNAIVSMYGKCGSLEDA 352

Query: 707 KHVIEIMPFQPSPTVYRSLLS 727
             V   +P +    +  +L+S
Sbjct: 353 WDVFHRVPRRNGVPIGNALIS 373


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 155/531 (29%), Positives = 270/531 (50%), Gaps = 37/531 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ L++  + S    G+ YA  VF+ + +  ++ WNT+F G 
Sbjct: 19  RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   +  G  PN  TF  LL+ C K      G QL    L  GF  + 
Sbjct: 79  ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138

Query: 383 NVTSSLIYMFCRCG-------------------------------AVEMAHSVFDNVSYK 411
            + +SLI M+ + G                                +E AH +FD +  K
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN  +SGY       + L+ F  + ++ V  +  T   V+  C +S + ++  Q+H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF     I ++LI  Y   G+L+ +     G    D+ SW  ++    H     
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GEKP++  + +IL++CA +GA    + IH ++ K   G      + ++
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A+  FD   N + +  +N +I  +A HG  + A +IF +M+   ++P
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRS-LSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEP 437

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+   +G  ++A+ +
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKM 497

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  M  +P   ++ SLL  C++HGN ELGE  ++ L+ + P+N  ++VLLS
Sbjct: 498 INTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLS 548



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/565 (24%), Positives = 248/565 (43%), Gaps = 69/565 (12%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMA 106
           SLSL    K+      +H  ++K G  N  +  + L+       +F    + + VFD + 
Sbjct: 5   SLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           E  L+ W  +      + +    LK+YV M + G +PN +    ++K C    A + G  
Sbjct: 65  EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124

Query: 167 IHCFALKIRIEKNPFVGCSVLNFY-------------------------------AKLGD 195
           +H   LK   + + ++  S+++ Y                               A  G 
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + +A ++F  I   DV  WNA I GYA  G   EAL +   M+   +  D+ T +  L  
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+     ++GRQ+H  I       ++ IVNALID+Y K   ++ A  +F+ +++KDVISW
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--A 373
           NTL GG++      +   LF   + SG +PN VT   +L  C  L  +D+G  +      
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G  +  ++ +SLI M+ +CG +E A  VFD++  +++++WN ++ G+  +       
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             F  + ++G+E +  TF  ++  C            H  ++  G     +I  S+ + Y
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACS-----------HSGMLDLG----RHIFRSMTRDY 469

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
               +L++               +G M+    H G   EA  + +++     +PD  I  
Sbjct: 470 KLMPKLEH---------------YGCMIDLXGHSGLFKEAEKMINTM---EMEPDGVIWC 511

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKL 578
           ++L +C   G  +  +S    +IK+
Sbjct: 512 SLLKACKMHGNVELGESYAQNLIKI 536



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-------------- 91
           FL KS + S   K    G Q+HG ++K GF  D+++  +LI+MY +              
Sbjct: 108 FLLKSCAKSXAFKE---GQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKS 164

Query: 92  ------------CGYFGWGL-----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                        GY   G      ++FDE+  +++VSW   +S   + G +   L+++ 
Sbjct: 165 SHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFK 224

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M      P+E  + +V+  C   G+ E G  +H +        N  +  ++++ Y+K G
Sbjct: 225 KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG 284

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           ++  A  +F  +S+ DV  WN +IGGY H     EAL +   ML  G   +  T ++ L 
Sbjct: 285 ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    V  + S+  +LIDMY K   ++ A +VF+ M ++ +
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +        +F +   +G  P+ +TF  LL  C     LDLG  +
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 134/284 (47%), Gaps = 4/284 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   LS      S  LG QVH  I   GF  ++ + N LI +YSKCG      
Sbjct: 231 VRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETAC 290

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  ++ ++++SW  ++        +   L ++ DM  +G  PN+  + S++  C  +G
Sbjct: 291 GLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLG 350

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +     +  S+++ YAK GD+ AA++VF S+ +  +  WNAM
Sbjct: 351 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAM 410

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-E 276
           I G+A  G    A ++ S M   GI  D  TF+  L  CS     D+GR I   + R  +
Sbjct: 411 IFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYK 470

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLF 319
           +   +     +ID+   S     A K+   M  + D + W +L 
Sbjct: 471 LMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLL 514


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 163/548 (29%), Positives = 287/548 (52%), Gaps = 5/548 (0%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN +I GY+  G G   L V + M+  G+  D +TF   L+ C+   +   GR++HG ++
Sbjct: 10  WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA- 332
           +   E  + + N L+  Y    G+  A +VF+ M +KD++SWNT+ G FS N    + A 
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            +F   I  G +PN +T S  L    +L     G ++   ++  G   +  + +SLI M+
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            + G    A +VF  +  KN+ +WN +++ +  N  +   +     + + G   N  TF 
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
            V+  C R    +   +IH   I  G +   ++ ++L   Y   G L  +    + + R 
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLR- 307

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           D  S+  ++          E++++F  +   G K D       L++CA + A ++ K IH
Sbjct: 308 DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIH 367

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            F+++  F+  ++VA++++D Y KCG I  AR  FD+  N  DV  +NT+I+ Y   G +
Sbjct: 368 GFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTN-KDVASWNTMILGYGMLGEL 426

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
             A+++F+ M+  +++    +F++V+SACSH GL++KG   F  + ++ G++P+   Y C
Sbjct: 427 DTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYAC 485

Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           +VD+L R G +E+A  +I+ +P  P   ++ +LL  CRI+GN EL  WA+E L  L P++
Sbjct: 486 MVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEH 545

Query: 753 DAAHVLLS 760
              + LLS
Sbjct: 546 SGYYTLLS 553



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 143/502 (28%), Positives = 235/502 (46%), Gaps = 36/502 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VHG +VKLGF +D+F+ N L++ Y  CG      RVFDEM E++LVSW  ++     
Sbjct: 60  GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119

Query: 123 NG-EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG  +   L M+  M   G  PN   + S + V V +   + G  +H  ++++ +E + F
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIF 179

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S+++ YAK G    A  VFY + + +V  WNAMI  +A   +   A+ +V  M   G
Sbjct: 180 IANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYG 239

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              +  TF N L  C+ +     G++IH   I       + + NAL DMY KS  +  A 
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLAR 299

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF+  + +D +S+N L  G S+  +  ++ SLF +  L G + ++V+F   L  C  L 
Sbjct: 300 NVFD-TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLT 358

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  G ++    L   F     V +SL+  + +CG + +A ++FD ++ K++ +WN ++ 
Sbjct: 359 AIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMIL 418

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GY         +  F N+ +  VE +  +F  V+  C            HG +++ G   
Sbjct: 419 GYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACS-----------HGGLLEKG--- 464

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
                    + Y  F +L      + G E   M  +  M+  L   G   EA  +   L 
Sbjct: 465 ---------RKY--FDELK-----ARGIEPTQM-HYACMVDLLGRAGLMEEAAELIKGLP 507

Query: 542 EAGEKPDEYILGTILNSCAAIG 563
                PD  I G +L +C   G
Sbjct: 508 IV---PDANIWGALLGACRIYG 526



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 264/566 (46%), Gaps = 12/566 (2%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
           GL++Y  M   G  P++     V+K C        G  +H   +K+  E + FVG ++L+
Sbjct: 25  GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLS 84

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF-EALNVVSSMLFEGITMDKY 247
           FY   G +  A RVF  +   D+  WN MIG ++  G+ + +AL++   M+ EG+  +  
Sbjct: 85  FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSI 144

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T  + L     +  F  GR++HG  IR  +E  I I N+LIDMY KS     A  VF ++
Sbjct: 145 TISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKL 204

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             K+V+SWN +   F++N+       L  +    G  PN VTF+ +L  C ++  +  G 
Sbjct: 205 DAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGK 264

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           ++   ++H G   +  V+++L  M+ + G +++A +VFD  S ++  ++N L+ G+    
Sbjct: 265 EIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TSLRDEVSYNILIVGHSQTS 323

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
             ++ L  F  +   G++ +  +F   +  C      +   +IHG +++  F    ++ +
Sbjct: 324 DCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVAN 383

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL+  Y   G++  +    +     D+ASW  M+      G    A+ +F ++ +   + 
Sbjct: 384 SLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEY 443

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D      +L++C+  G  ++ +     +   G        + ++D   + G ++ A    
Sbjct: 444 DSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELI 503

Query: 608 DQSFNSNDVIVYNTLIMA---YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SH 663
                  D  ++  L+ A   Y +  L + A E      L  L+P  + + +++S   + 
Sbjct: 504 KGLPIVPDANIWGALLGACRIYGNLELAAWAAE-----HLFELKPEHSGYYTLLSNMYAE 558

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDC 689
            G  D+   + + M S+ G++ SP C
Sbjct: 559 TGRWDEANRIRELMKSR-GVKKSPGC 583



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 163/328 (49%), Gaps = 3/328 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  L+ + I ++  L +   L+    G +VHG  +++G  +DIF+ N+LI MY+K G+  
Sbjct: 136 DEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHST 195

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               VF ++  +N+VSW  +++   QN    + + +   M+  G +PN     +V+  C 
Sbjct: 196 EASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACA 255

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            MG    G  IH  ++ +    + FV  ++ + YAK G +  A  VF +   D+V  +N 
Sbjct: 256 RMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEV-SYNI 314

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I G++      E+L++ S M   G+  D  +F+ AL  C+ +     G++IHG ++R  
Sbjct: 315 LIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKL 374

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
               + + N+L+D Y K   +  A  +F+RM +KDV SWNT+  G+           LF 
Sbjct: 375 FHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFE 434

Query: 337 KFILSGSRPNHVTFSILLRQC--GKLLD 362
                    + V+F  +L  C  G LL+
Sbjct: 435 NMRKDDVEYDSVSFIAVLSACSHGGLLE 462



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 40/271 (14%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L++D +    +LS   NL +   G ++HG +++  F   +F+ N+L+  Y+KCG  G   
Sbjct: 340 LKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLAR 399

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD M  +++ SW  ++      GE D  + ++ +M+ +    +  +  +V+  C   G
Sbjct: 400 NIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGG 459

Query: 160 ASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAM 217
             E G   +   LK R IE        +++   + G +  A  +   +    D   W A+
Sbjct: 460 LLEKGRK-YFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGAL 518

Query: 218 IGG---------------------YAHCGYGFEALNVVSSMLFEGITMDKYTFINAL--- 253
           +G                        H GY      ++S+M  E    D+   I  L   
Sbjct: 519 LGACRIYGNLELAAWAAEHLFELKPEHSGY----YTLLSNMYAETGRWDEANRIRELMKS 574

Query: 254 ------QGCSLVADFDIGRQIHGLIIRSEVE 278
                  GCS V    IG Q H  ++  ++E
Sbjct: 575 RGVKKSPGCSWV---QIGEQAHAFVVGEKIE 602


>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
          Length = 804

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 173/577 (29%), Positives = 297/577 (51%), Gaps = 21/577 (3%)

Query: 185 SVLNFYA-----KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           S+LN YA     +   V    R+F ++   +V  WN + G Y   G   EAL +   ML 
Sbjct: 147 SLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLE 206

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGM 297
           +G      +F+N     ++  D     Q++GL+++  VE    + +V++ IDM+ +   +
Sbjct: 207 DGFRPTPVSFVNIFP-AAVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDV 265

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQ 356
             A +VF+R A K+   WNT+  G+ +N    +   LF K + S   P + VTF   L  
Sbjct: 266 QSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTA 325

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             +  D+ LG QL    +  G      V   ++L+ M+ RCG V+ A  +FD +  K+I 
Sbjct: 326 ASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIV 384

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN +++ +  N  D + L     + +SG   +  T   V+     + + Q+  Q HG +
Sbjct: 385 TWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYL 444

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNH 531
           I+ G    G + S LI  Y   G+++ +   F+    A+R D  +W AM++     G   
Sbjct: 445 IRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKR-DEVTWNAMIAGYTQSGQPE 502

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAV 590
           +A+ +F +++EAG +P    L ++L +C  +G      K IH F ++   +T V+V +A+
Sbjct: 503 KAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTAL 562

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y+KCG+I  A   F         + Y T+I     HG   +A+ +F+ M+   L+P 
Sbjct: 563 IDMYSKCGEITTAENVFG-GMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPD 621

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF+S +SAC++ GLVD+G  L++SMDS +G+  +P  + C+ D+L++ G +E+A   I
Sbjct: 622 AVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAYEFI 680

Query: 711 EIMPFQPS-PTVYRSLLSGCRIHGNKELGEWASEKLL 746
           E +  + +   ++ SLL+ C+  G +EL +  ++KLL
Sbjct: 681 EGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLL 717



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 263/554 (47%), Gaps = 20/554 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGL-----RVFDEMAERNLVSWTLIVS 118
           VH H+++      +   L+N+L+ +Y+    +         R+FD M +RN+VSW  +  
Sbjct: 127 VHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFG 186

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE- 177
             ++ G     L+++V M  +GF P   +  ++    V+   S + + ++   +K  +E 
Sbjct: 187 WYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPS-WPFQLYGLLVKYGVEY 245

Query: 178 -KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             + FV  S ++ +++ GDV +A RVF   +  +   WN MI GY   G   EA+++ S 
Sbjct: 246 INDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSK 305

Query: 237 ML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKS 294
           +L    + +D  TF++AL   S   D  +G+Q+HG +I+       + + NAL+ MY + 
Sbjct: 306 ILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRC 365

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  AF +F+R+ +KD+++WNT+   F +N    +   L ++   SG   + VT + +L
Sbjct: 366 GNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVL 425

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI- 413
                  DL +G Q     +  G ++ E + S LI M+ + G VEMA  VFD  S+KN  
Sbjct: 426 SASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFD--SFKNAK 482

Query: 414 ---TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-Q 469
               TWN +++GY  +      +  F  + E+G+E    T   V+  C         G Q
Sbjct: 483 RDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQ 542

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IH   ++    +  ++ ++LI  Y   G++  +     G       ++  M+S L   G 
Sbjct: 543 IHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGF 602

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             +A+ +F+S+ E G KPD     + +++C   G      +++  +   G +        
Sbjct: 603 GKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCC 662

Query: 590 VIDAYAKCGDIKGA 603
           V D  AK G ++ A
Sbjct: 663 VADLLAKAGRVEEA 676



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 231/489 (47%), Gaps = 14/489 (2%)

Query: 65  QVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q++G +VK G  + ND+F+ ++ I M+S+ G      RVFD  A++N   W  +++  +Q
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFALKIRIEKN 179
           NG+F   + ++  +  +  +P    V + +    +   S+    G  +H + +K      
Sbjct: 293 NGQFSEAIDLFSKILGSREVP--LDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTL 350

Query: 180 PFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           P + G +++  Y++ G+V  A  +F  +   D+  WN M+  +    +  E L +V  M 
Sbjct: 351 PVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQ 410

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G   D  T    L   S   D  IG+Q HG +IR  +E    + + LIDMY KS  ++
Sbjct: 411 KSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVE 469

Query: 299 YAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            A +VF+  + A +D ++WN +  G++++  P +   +F   + +G  P  VT + +L  
Sbjct: 470 MAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPA 529

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C  +   +  G Q+ C A+         V ++LI M+ +CG +  A +VF  ++ K+  T
Sbjct: 530 CDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVT 589

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +  ++SG   +      L  F ++ E G++ +  TF   +  C  S        ++ ++ 
Sbjct: 590 YTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD 649

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEA 533
             G S+       +       G+++ ++EF    G E   +A WG+++++   QG    A
Sbjct: 650 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 709

Query: 534 VTIFHSLVE 542
             +   L++
Sbjct: 710 KLVTKKLLD 718



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 9/386 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           D +    +L+ +   +   LG Q+HG+++K +  T  + L N L+ MYS+CG       +
Sbjct: 315 DVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDL 374

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           FD + E+++V+W  +V+A IQN +FD+ GL +  +M+ +GF  +   + +V+    + G 
Sbjct: 375 FDRLPEKDIVTWNTMVTAFIQN-DFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGD 433

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            + G   H + ++  IE    +   +++ YAK G V  A+RVF S   +  D   WNAMI
Sbjct: 434 LQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMI 492

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADFDIGRQIHGLIIRSEV 277
            GY   G   +A+ V  +ML  G+     T  + L  C  V      G+QIH   +R  +
Sbjct: 493 AGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCL 552

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ +  ALIDMY K   +  A  VF  M  K  +++ T+  G  ++    +  +LF+ 
Sbjct: 553 DTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNS 612

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +P+ VTF   +  C     +D GL L       G          +  +  + G 
Sbjct: 613 MQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGR 672

Query: 398 VEMAHSVFDNVSYKN--ITTWNELLS 421
           VE A+   + +  +   +  W  LL+
Sbjct: 673 VEEAYEFIEGLGEEGNFVAIWGSLLA 698



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 160/326 (49%), Gaps = 20/326 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L   LS S N     +G Q HG++++ G   +  L++ LI MY+K G      RVF
Sbjct: 417 DSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVF 475

Query: 103 DEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           D    A+R+ V+W  +++   Q+G+ +  + ++  M   G  P    + SV+  C  +G 
Sbjct: 476 DSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGG 535

Query: 161 SEF-GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IHCFA++  ++ N FVG ++++ Y+K G++  AE VF  ++      +  MI 
Sbjct: 536 GVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMIS 595

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH------GLII 273
           G    G+G +AL + +SM  +G+  D  TF++A+  C+     D G  ++      G+  
Sbjct: 596 GLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISA 655

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD--VISWNTLFGGFSENKNPGQT 331
             +  C ++      D+  K+  ++ A++  E + ++   V  W +L     + +   + 
Sbjct: 656 TPQHHCCVA------DLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS-CKAQGKQEL 708

Query: 332 ASLFHKFILSGSRP-NHVTFSILLRQ 356
           A L  K +L   +   H  +S+LL Q
Sbjct: 709 AKLVTKKLLDIEKQYGHAGYSVLLSQ 734


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 189/659 (28%), Positives = 322/659 (48%), Gaps = 46/659 (6%)

Query: 140 GFMPN--EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           GF+ N  +  V  V+K C   G S+ G  IH FA+      +  V  S++N Y K G   
Sbjct: 73  GFVGNIDQVTVAIVLKACC--GDSKLGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFD 130

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  VF ++++ D+  WN ++ G+       +ALN    M F G+  D  T    L  CS
Sbjct: 131 RALVVFENLNNPDIVSWNTVLSGFQRSD---DALNFALRMNFTGVAFDAVTCTTVLAFCS 187

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
               F  G Q+H  I++  ++C + + NALI MY +            R+ +        
Sbjct: 188 DHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCC----------RLVE-------- 229

Query: 318 LFGGFSENKNPGQTASL-FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
                +   N G  A L F + +  G + +HV+F+  +  CG   + +LG Q+  LA+  
Sbjct: 230 -----ARRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKI 284

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G+     V + LI  + +C  +E A  VF+++  +N+ +W  ++S       + D    F
Sbjct: 285 GYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-----ISEEDATSLF 339

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   GV  N  TF  ++         +    IHG  +KT F S   + +SLI  Y  F
Sbjct: 340 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 399

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS-LVEAGEKPDEYILGTI 555
             + +S +        ++ SW +++S     G   EA+  F S L+E+  +P+E+  G++
Sbjct: 400 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMES--RPNEFTFGSV 457

Query: 556 LNSCAAIGA--YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           L+S A+  A   +  +  H  ++KLG NT   V+SA++D YAK G I  +   F ++   
Sbjct: 458 LSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLK 517

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           N+V  +  +I A+A HG     M +F  M+   ++P   TF++V++AC  KG+VD G  L
Sbjct: 518 NEV-AWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQL 576

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F SM   + ++PSP+ Y  +VDML R G L++A+  +  +P     +V +SLL  CRIHG
Sbjct: 577 FNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHG 636

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
           N ++ +  ++ L+ + P    ++VL+S    ++     + E V  +  G++   ++ E+
Sbjct: 637 NVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKG----EWEKVAKIRKGMRERGVRKEI 691



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 161/623 (25%), Positives = 280/623 (44%), Gaps = 43/623 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +  GF + + + N+L+ MY K G F   L VF+ +   ++VSW  ++S   
Sbjct: 96  LGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQ 155

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++   D  L   + M   G   +     +V+  C       FG+ +H   LK  ++   F
Sbjct: 156 RS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVF 212

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++  Y++   +  A R                         G EA+ V   ML EG
Sbjct: 213 VGNALITMYSRCCRLVEARR----------------------GNSGLEAILVFLEMLKEG 250

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + +D  +F  A+  C    +F++GRQIH L ++   +  + + N LI  Y K   ++ A 
Sbjct: 251 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 310

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VFE + D++V+SW T+     E+       SLF++    G  PN VTF  L+       
Sbjct: 311 LVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPNDVTFVGLIHAITMKN 365

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            ++ G  +  + +   FL E NV++SLI M+ +  ++  +  VF+ ++Y+ I +WN L+S
Sbjct: 366 LVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 425

Query: 422 GYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMV-GQ-IHGAIIKTG 478
           GY  N    + L+TF + + ES    N  TF  V+ +   +E   M  GQ  H  I+K G
Sbjct: 426 GYAQNGLWQEALQTFLSALMES--RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLG 483

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            ++   + S+L+  Y   G +  S    +     +  +W A++SA    G     + +F 
Sbjct: 484 LNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFK 543

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDAYA 595
            +   G KPD      ++ +C   G       +   ++K   +  + E Y  S+++D   
Sbjct: 544 DMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY--SSMVDMLG 601

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-SQATF 654
           + G +K A     Q      + V  +L+ A   HG V  A  + D   L  ++P    ++
Sbjct: 602 RAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVAD--DLIEMEPMGSGSY 659

Query: 655 VSVMSACSHKGLVDKGCLLFKSM 677
           V + +  + KG  +K   + K M
Sbjct: 660 VLMSNLYAEKGEWEKVAKIRKGM 682



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 233/513 (45%), Gaps = 40/513 (7%)

Query: 228 FEALNVVSSMLFEGIT--MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
            EAL++    L  G    +D+ T    L+ C    D  +G QIH   I S     +++ N
Sbjct: 60  LEALDLFKKQLQWGFVGNIDQVTVAIVLKAC--CGDSKLGCQIHAFAISSGFISHVTVPN 117

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L++MY K+   D A  VFE + + D++SWNT+  GF  + +    A    +   +G   
Sbjct: 118 SLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSDDALNFAL---RMNFTGVAF 174

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           + VT + +L  C        G QL    L CG   E  V ++LI M+ RC    +  +  
Sbjct: 175 DAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRC--CRLVEARR 232

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            N   + I  + E+L                    + G++++  +F   +  C   +  +
Sbjct: 233 GNSGLEAILVFLEML--------------------KEGMKLDHVSFTGAISACGHGKEFE 272

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSAL 524
           +  QIH   +K G+ +   +C+ LI +Y     + D    F +  +R ++ SW  M+S  
Sbjct: 273 LGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDR-NVVSWTTMISI- 330

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                  +A ++F+ +   G  P++     ++++       +  + IH   +K  F +E+
Sbjct: 331 ----SEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSEL 386

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V++++I  YAK   +  +   F++  N  ++I +N+LI  YA +GL  EA++ F    L
Sbjct: 387 NVSNSLITMYAKFESMSDSMKVFEE-LNYREIISWNSLISGYAQNGLWQEALQTFLS-AL 444

Query: 645 ANLQPSQATFVSVMSA-CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              +P++ TF SV+S+  S + +  +      S   + G+  +P     L+DM ++ G +
Sbjct: 445 MESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSI 504

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            ++  V    P + +   + +++S    HG+ E
Sbjct: 505 CESLGVFSETPLK-NEVAWTAIISAHARHGDYE 536



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/402 (24%), Positives = 181/402 (45%), Gaps = 30/402 (7%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           + G Q+H  I+K G   ++F+ N LI MYS+C                       +V A 
Sbjct: 193 IFGFQLHSRILKCGLDCEVFVGNALITMYSRC---------------------CRLVEAR 231

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             N   +  + ++++M   G   +  +    +  C      E G  IH  A+KI  + + 
Sbjct: 232 RGNSGLE-AILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHV 290

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V   +++ Y+K  D+  A+ VF SI   +V  W  MI          +A ++ + M  +
Sbjct: 291 KVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRD 345

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  +  TF+  +   ++    + G+ IHG+ +++     +++ N+LI MY K   M  +
Sbjct: 346 GVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDS 405

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ--CG 358
            KVFE +  +++ISWN+L  G+++N    +    F   ++  SRPN  TF  +L      
Sbjct: 406 MKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALME-SRPNEFTFGSVLSSIASA 464

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           + + +  G +     L  G      V+S+L+ M+ + G++  +  VF     KN   W  
Sbjct: 465 EAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTA 524

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           ++S +  +     V+  F ++   GV+ +  TF  V+  C R
Sbjct: 525 IISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGR 566



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 157/332 (47%), Gaps = 8/332 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D +    ++S   + K   LG Q+H   VK+G+   + + N LI+ YSKC       
Sbjct: 251 MKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAK 310

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +RN+VSWT ++S + ++        ++ +M+ +G  PN+     ++       
Sbjct: 311 LVFESIIDRNVVSWTTMISISEEDAT-----SLFNEMRRDGVYPNDVTFVGLIHAITMKN 365

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  IH   +K        V  S++  YAK   ++ + +VF  ++  ++  WN++I 
Sbjct: 366 LVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLIS 425

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI--GRQIHGLIIRSEV 277
           GYA  G   EAL    S L E    +++TF + L   +      +  G++ H  I++  +
Sbjct: 426 GYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGL 484

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             +  + +AL+DMY K   +  +  VF     K+ ++W  +    + + +     +LF  
Sbjct: 485 NTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKD 544

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
               G +P+ +TF  ++  CG+   +D G QL
Sbjct: 545 MEREGVKPDSITFLAVITACGRKGMVDTGYQL 576


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 153/584 (26%), Positives = 302/584 (51%), Gaps = 9/584 (1%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N F+G  ++  Y K G VA+A   F +I+  +   W +M+  YA  G+   AL++   M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGM 297
              +  +   +   L  C+ +   + G+ IH  I  ++ ++  + + N+L+ MY K   +
Sbjct: 116 --DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSL 173

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A ++FERM+ + V SWN +   ++++ +  +   L+    +    P+  TF+ +L  C
Sbjct: 174 EDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSAC 230

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  LD G ++  L    G   + ++ ++L+ M+ RC  ++ A  +F  +  +++ +W+
Sbjct: 231 SNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWS 290

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++ +       + ++ +  +   GV  N  TF  V+  C    + +    +H  I+  
Sbjct: 291 AMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGN 350

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+       ++L+  Y ++G LD +    +  E  D   W  ++     QGH    + ++
Sbjct: 351 GYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELY 410

Query: 538 HSLVEAGEKPDEYILGT-ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
             +    + P   I+ + ++++CA++GA+   +  H  +   G  ++  +A+++++ Y++
Sbjct: 411 REMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSR 470

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
            G+++ AR  FD+  +S D + + TLI  YA HG    A+ ++ +M+L   +PS+ TF+ 
Sbjct: 471 WGNLESARQVFDK-MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 529

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+ ACSH GL ++G  LF S+ S Y M P+   Y C++D+LSR G L DA+ +I  MP +
Sbjct: 530 VLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVE 589

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P+   + SLL   RIH + +    A+ ++  L P + A++VLLS
Sbjct: 590 PNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLS 633



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/604 (25%), Positives = 274/604 (45%), Gaps = 15/604 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I      N +FL N ++  Y KCG        FD +A +N  SW  +++A  QNG
Sbjct: 45  QIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNG 103

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPFVG 183
            +   L +Y  M      PN     +V+  C S+ A E G +IH      + ++ +  + 
Sbjct: 104 HYRAALDLYKRMD---LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILE 160

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S+L  YAK G +  A+R+F  +S   V  WNAMI  YA  G+  EA+ +   M  E   
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSV 220

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
               TF + L  CS +   D GR+IH LI     E  +S+ NAL+ MY +   +D A K+
Sbjct: 221 R---TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKI 277

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+R+  +DV+SW+ +   F+E     +    + K  L G RPN+ TF+ +L  C  + DL
Sbjct: 278 FQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDL 337

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  +    L  G+       ++L+ ++   G+++ A S+FD +  ++   W  L+ GY
Sbjct: 338 RAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGY 397

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFY--VVETCCRSENQQMVGQIHGAIIKTGFSS 481
                   VL+ +  + ++  +V      Y  V+  C          Q H  I   G  S
Sbjct: 398 SKQGHRTGVLELYREM-KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMIS 456

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + +SL+  Y  +G L+++ +  +     D  +W  +++     G +  A+ ++  + 
Sbjct: 457 DFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEME 516

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGD 599
             G +P E     +L +C+  G  ++ K +    I+  +     +A  S +ID  ++ G 
Sbjct: 517 LEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAGR 575

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVM 658
           +  A    +      + + +++L+ A   H  V  A     ++ KL  + P+    +S +
Sbjct: 576 LSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNV 635

Query: 659 SACS 662
            A +
Sbjct: 636 HAVT 639



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 203/433 (46%), Gaps = 5/433 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWG 98
           L+ +P+     L    ++K+   G  +H  I    G   D+ L+N+L+ MY+KCG     
Sbjct: 117 LQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            R+F+ M+ R++ SW  +++A  Q+G F+  +++Y DM      P+     SV+  C ++
Sbjct: 177 KRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSNL 233

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G  + G  IH        E +  +  ++L  YA+   +  A ++F  +   DV  W+AMI
Sbjct: 234 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 293

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             +A      EA+   S M  EG+  + YTF + L  C+ V D   GR +H  I+ +  +
Sbjct: 294 AAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYK 353

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            ++    AL+D+Y     +D A  +F+++ ++D   W  L GG+S+  +      L+ + 
Sbjct: 354 ITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREM 413

Query: 339 ILSGSRP-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             +   P   + +S ++  C  L       Q        G + +  + +SL+ M+ R G 
Sbjct: 414 KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGN 473

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E A  VFD +S ++   W  L++GY  +      L  +  +   G E +  TF  V+  
Sbjct: 474 LESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYA 533

Query: 458 CCRSENQQMVGQI 470
           C  +  Q+   Q+
Sbjct: 534 CSHAGLQEQGKQL 546


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 168/583 (28%), Positives = 297/583 (50%), Gaps = 7/583 (1%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+   ++N YA LGD+  A   F  I + DV  WN+MI  YA  G+   A++  +  L  
Sbjct: 76  FLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLST 135

Query: 241 G-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
             +  D YTF   ++ C    + D GR++H L+++   EC + I  + I  Y +   +  
Sbjct: 136 SFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSL 192

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F+ M  +D+ +WN +  GF  N    +   +F +        + VT S LL  C +
Sbjct: 193 ACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQ 252

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L D+  G+ +   A+  G   +  V ++LI M+ + G +  A ++F+ +  ++I +WN L
Sbjct: 253 LDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSL 312

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-G 478
           L+ +  N      L  +  +   GV  +  T   +        N      IHG + +   
Sbjct: 313 LAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCW 372

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F     + +++I  Y   G +D++ +   G    D+ SW ++++     G  +EA+ ++ 
Sbjct: 373 FLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYS 432

Query: 539 SL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           S+   +G  P++    +IL + + +GA ++    H  +IK     +++V++ ++D Y KC
Sbjct: 433 SMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC 492

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  A   F +  + + V  +N +I  +  HG   +A+++F +M+   ++P   TFVS+
Sbjct: 493 GKLADALSLFYEVPHQSSV-SWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSL 551

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +SACSH GLVD+G   F+ M   YG++PS   YGC+VD+  R G+LE A + ++ MP +P
Sbjct: 552 LSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRP 611

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +V+ +LL  CRIH N EL    S+ LL +  +N   +VLLS
Sbjct: 612 DVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLS 654



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 291/652 (44%), Gaps = 37/652 (5%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           L  Q+H  +V  G T  IFL   LI  Y+  G        FD++  +++ +W  ++SA  
Sbjct: 58  LAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYA 117

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + G F   +  + +  +  F+ ++ +    V++ C   G  + G  +HC  LK+  E + 
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDV 174

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           ++  S ++FY++ G V+ A  +F ++   D+G WNAMI G+   G   EAL V   M F+
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFK 234

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            ++MD  T  + L  C  + D   G  IH   I+  +E  + + NALI+MY K   +  A
Sbjct: 235 SVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSA 294

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F +M  +D++SWN+L   F +NK P     +++K    G  P+ +T   L       
Sbjct: 295 ETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA-- 352

Query: 361 LDLDLGLQLQCLALH------CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
              +LG  L   ++H      C FL +  + +++I M+ + G ++ A  VF+ +  K++ 
Sbjct: 353 ---ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409

Query: 415 TWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
           +WN L++GY  N    + +  + ++ + SG   N  T+  ++    +    +   + HG 
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQ 469

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           +IK       ++ + L+  Y   G+L ++             SW A++S     G+  +A
Sbjct: 470 LIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKA 529

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAY----------QRTKSIHPFVIKLGFNTE 583
           V +F  +   G KPD     ++L++C+  G            Q T  I P +   G    
Sbjct: 530 VKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYG---- 585

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
                 ++D + + G ++ A           DV V+  L+ A   H  V     + D   
Sbjct: 586 -----CMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSD--H 638

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           L  ++     +  ++S    K    +G    +S+    G++ +P      VD
Sbjct: 639 LLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVD 690



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 187/386 (48%), Gaps = 5/386 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + ++  L +   L   + G  +H + +KLG   D+F+ N LI MY+K G       +F
Sbjct: 239 DSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIF 298

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           ++M  R++VSW  +++A  QN +  + L +Y  M + G +P+   + S+  V   +G   
Sbjct: 299 NQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFL 358

Query: 163 FGYSIHCFAL-KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
              SIH F   +     +  +G ++++ YAKLG + +A +VF  +   DV  WN++I GY
Sbjct: 359 SSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGY 418

Query: 222 AHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           +  G   EA++V SSM  + G   ++ T+++ L   S +     G + HG +I++ +   
Sbjct: 419 SQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFD 478

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I +   L+DMY K   +  A  +F  +  +  +SWN +      +    +   LF +   
Sbjct: 479 IFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQS 538

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G +P+H+TF  LL  C     +D G    Q +    G          ++ +F R G +E
Sbjct: 539 EGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLE 598

Query: 400 MAHSVFDNVSYK-NITTWNELLSGYC 424
            A +   N+  + +++ W  LL G C
Sbjct: 599 KAFNFVKNMPVRPDVSVWGALL-GAC 623


>gi|302814959|ref|XP_002989162.1| hypothetical protein SELMODRAFT_129336 [Selaginella moellendorffii]
 gi|300143062|gb|EFJ09756.1| hypothetical protein SELMODRAFT_129336 [Selaginella moellendorffii]
          Length = 674

 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 185/675 (27%), Positives = 328/675 (48%), Gaps = 40/675 (5%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           ++VSWT ++    Q G++D  + +   M+  G  PN F  GS++K C  +   E G  IH
Sbjct: 10  DVVSWTSLIWGYSQRGQWDQAMALLGRMQQEGVAPNSFTFGSILKACKDV---EAGARIH 66

Query: 169 CFALKIR----IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYA 222
            F L++R    +  + +V  +++  Y   G  AAA  VF +I S   ++  W+AM+G  A
Sbjct: 67  RFLLQVRHGQILYHDVYVATALVGMYGSCGHSAAAREVFDAIPSATKNIVTWSAMLGTNA 126

Query: 223 HCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              +  + + +  S L +G + +DK  FI  L  CS   +   G   H   + +      
Sbjct: 127 SV-WRQQGMELFWSFLNDGSLRVDKVVFITVLGLCS---NLTQGCFCHSCALEAGFAADP 182

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
           ++ +ALI  Y +      A +VF  M  KDV+SW ++     +  +  +   LF + +L 
Sbjct: 183 AVCHALIVTYGRCGSSPLARQVFSEMVRKDVVSWTSMI----KAADADECLLLFRQMLLE 238

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQL-QCL---ALHCGFLDEENVTSSLIYMFCRCGA 397
           G  PN +T +  L  C    DL     L QC+   A   G+  +  V +SLI M+ +C A
Sbjct: 239 GVAPNELTLAEALHSCSLAPDLPATFALGQCVHACARELGYETDVVVGTSLINMYAKCAA 298

Query: 398 VEMAHSVFDNVS---YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           +  A ++F  ++     N   W  +++           ++ +  +   G+  N  +F   
Sbjct: 299 LPQAEAIFHLLATNARTNCVCWTAMITANAKAGEWKQAIRLYRQMQLQGIAPNRVSFIAA 358

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C   E       +H   ++ G  S   + ++++  Y   G  +++ +  +G +R D 
Sbjct: 359 LSACSTPEFLATGKLVHSCTVERGLESDTMVANAVVSMYGKCGSTEDARKMFDGMKRRDS 418

Query: 515 ASWGAMMSALVHQG------HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            +W AM++A+   G       N +A+ +F S+   G KP +  L ++LN C+ + A    
Sbjct: 419 VTWSAMLAAIALAGELDSRARNEQALLLFASMQLEGVKPTKVTLVSLLNCCSDLAA---G 475

Query: 569 KSIHPFVI----KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           + IH  V+      G   EV + +AV++ YA+CG +  A   F     + D I +N +I 
Sbjct: 476 RMIHSRVLLDRRPDGGELEVALWNAVVNMYARCGSLDSAAREF-HGAQARDFISWNGMIT 534

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           A A H   S+A+  F +M+   + P + T V+++ AC+H G V++GC  F SM   YG+ 
Sbjct: 535 ASAQHSRWSDAVAYFQEMQQEGVDPDEVTMVTLLFACNHAGFVEQGCNYFASMSKDYGLS 594

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
           P  +   C++DML R+G++E A+ +++       P ++ SLL  CR+HG+ E    AS +
Sbjct: 595 PRLEHSACVLDMLGRSGHVEVAQEMLKDSACS-DPVLWTSLLGSCRVHGDLERARAASGQ 653

Query: 745 LLLLLPKNDAAHVLL 759
           +L + P + +A+V+L
Sbjct: 654 ILDVNPASSSAYVVL 668



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 237/554 (42%), Gaps = 61/554 (11%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           F +D  LR D +     L L  NL     G   H   ++ GF  D  + + LI  Y +CG
Sbjct: 140 FLNDGSLRVDKVVFITVLGLCSNLTQ---GCFCHSCALEAGFAADPAVCHALIVTYGRCG 196

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
                 +VF EM  +++VSWT ++ AA    + D  L ++  M   G  PNE  +   + 
Sbjct: 197 SSPLARQVFSEMVRKDVVSWTSMIKAA----DADECLLLFRQMLLEGVAPNELTLAEALH 252

Query: 154 VC---VSMGAS-EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
            C     + A+   G  +H  A ++  E +  VG S++N YAK   +  AE +F+ ++++
Sbjct: 253 SCSLAPDLPATFALGQCVHACARELGYETDVVVGTSLINMYAKCAALPQAEAIFHLLATN 312

Query: 210 ---DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +  CW AMI   A  G   +A+ +   M  +GI  ++ +FI AL  CS       G+
Sbjct: 313 ARTNCVCWTAMITANAKAGEWKQAIRLYRQMQLQGIAPNRVSFIAALSACSTPEFLATGK 372

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF------G 320
            +H   +   +E    + NA++ MY K    + A K+F+ M  +D ++W+ +       G
Sbjct: 373 LVHSCTVERGLESDTMVANAVVSMYGKCGSTEDARKMFDGMKRRDSVTWSAMLAAIALAG 432

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
                    Q   LF    L G +P  VT   LL  C    DL  G  +    L     D
Sbjct: 433 ELDSRARNEQALLLFASMQLEGVKPTKVTLVSLLNCCS---DLAAGRMIHSRVLLDRRPD 489

Query: 381 ----EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
               E  + ++++ M+ RCG+++ A   F     ++  +WN +++    +   +D +  F
Sbjct: 490 GGELEVALWNAVVNMYARCGSLDSAAREFHGAQARDFISWNGMITASAQHSRWSDAVAYF 549

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             + + GV+ +  T   ++  C            H   ++ G   C Y  +S+ K Y   
Sbjct: 550 QEMQQEGVDPDEVTMVTLLFAC-----------NHAGFVEQG---CNYF-ASMSKDYGLS 594

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
            +L++S      A  LDM         L   GH    V +   +++     D  +  ++L
Sbjct: 595 PRLEHS------ACVLDM---------LGRSGH----VEVAQEMLKDSACSDPVLWTSLL 635

Query: 557 NSCAAIGAYQRTKS 570
            SC   G  +R ++
Sbjct: 636 GSCRVHGDLERARA 649



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/612 (22%), Positives = 264/612 (43%), Gaps = 41/612 (6%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIV--SAAIQ 122
           HG I+     +D+++   L+ MY  CG+      VFD +  A +N+V+W+ ++  +A++ 
Sbjct: 74  HGQILY----HDVYVATALVGMYGSCGHSAAAREVFDAIPSATKNIVTWSAMLGTNASVW 129

Query: 123 NGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             +   G++++     +G +  ++    +V+ +C ++    F    H  AL+     +P 
Sbjct: 130 RQQ---GMELFWSFLNDGSLRVDKVVFITVLGLCSNLTQGCF---CHSCALEAGFAADPA 183

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +++  Y + G    A +VF  +   DV  W +MI          E L +   ML EG
Sbjct: 184 VCHALIVTYGRCGSSPLARQVFSEMVRKDVVSWTSMI----KAADADECLLLFRQMLLEG 239

Query: 242 ITMDKYTFINALQGCSLVAD----FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           +  ++ T   AL  CSL  D    F +G+ +H        E  + +  +LI+MY K + +
Sbjct: 240 VAPNELTLAEALHSCSLAPDLPATFALGQCVHACARELGYETDVVVGTSLINMYAKCAAL 299

Query: 298 DYAFKVFERMAD---KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             A  +F  +A     + + W  +    ++     Q   L+ +  L G  PN V+F   L
Sbjct: 300 PQAEAIFHLLATNARTNCVCWTAMITANAKAGEWKQAIRLYRQMQLQGIAPNRVSFIAAL 359

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C     L  G  +    +  G   +  V ++++ M+ +CG+ E A  +FD +  ++  
Sbjct: 360 SACSTPEFLATGKLVHSCTVERGLESDTMVANAVVSMYGKCGSTEDARKMFDGMKRRDSV 419

Query: 415 TWNELLSGYCF------NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           TW+ +L+             +   L  F ++   GV+    T   ++  C      +M  
Sbjct: 420 TWSAMLAAIALAGELDSRARNEQALLLFASMQLEGVKPTKVTLVSLLNCCSDLAAGRM-- 477

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNF----GQLDNSFEFSNGAERLDMASWGAMMSAL 524
            IH  ++       G +  +L  + VN     G LD++    +GA+  D  SW  M++A 
Sbjct: 478 -IHSRVLLDRRPDGGELEVALWNAVVNMYARCGSLDSAAREFHGAQARDFISWNGMITAS 536

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTE 583
                  +AV  F  + + G  PDE  + T+L +C   G  ++  +    + K  G +  
Sbjct: 537 AQHSRWSDAVAYFQEMQQEGVDPDEVTMVTLLFACNHAGFVEQGCNYFASMSKDYGLSPR 596

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           +  ++ V+D   + G ++ A+     S  S D +++ +L+ +   HG +  A     ++ 
Sbjct: 597 LEHSACVLDMLGRSGHVEVAQEMLKDSACS-DPVLWTSLLGSCRVHGDLERARAASGQIL 655

Query: 644 LANLQPSQATFV 655
             N   S A  V
Sbjct: 656 DVNPASSSAYVV 667



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 12/213 (5%)

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
           S+G+   D+ SW +++     +G   +A+ +   + + G  P+ +  G+IL +C  + A 
Sbjct: 3   SSGSTIPDVVSWTSLIWGYSQRGQWDQAMALLGRMQQEGVAPNSFTFGSILKACKDVEAG 62

Query: 566 QRTKSIHPFVIKLGFNT----EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
            R   IH F++++        +VYVA+A++  Y  CG    AR  FD   ++   IV  +
Sbjct: 63  AR---IHRFLLQVRHGQILYHDVYVATALVGMYGSCGHSAAAREVFDAIPSATKNIVTWS 119

Query: 622 LIMAYAHHGLVSEAMEIFDK-MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
            ++         + ME+F   +   +L+  +  F++V+  CS+   + +GC    S   +
Sbjct: 120 AMLGTNASVWRQQGMELFWSFLNDGSLRVDKVVFITVLGLCSN---LTQGCFC-HSCALE 175

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            G    P     L+    R G    A+ V   M
Sbjct: 176 AGFAADPAVCHALIVTYGRCGSSPLARQVFSEM 208


>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
          Length = 674

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 173/577 (29%), Positives = 297/577 (51%), Gaps = 21/577 (3%)

Query: 185 SVLNFYA-----KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           S+LN YA     +   V    R+F ++   +V  WN + G Y   G   EAL +   ML 
Sbjct: 17  SLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLE 76

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGM 297
           +G      +F+N     ++  D     Q++GL+++  VE    + +V++ IDM+ +   +
Sbjct: 77  DGFRPTPVSFVNIFP-AAVADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDV 135

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQ 356
             A +VF+R A K+   WNT+  G+ +N    +   LF K + S   P + VTF   L  
Sbjct: 136 QSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTA 195

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             +  D+ LG QL    +  G      V   ++L+ M+ RCG V+ A  +FD +  K+I 
Sbjct: 196 ASQSQDVSLGQQLHGYLIK-GMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIV 254

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           TWN +++ +  N  D + L     + +SG   +  T   V+     + + Q+  Q HG +
Sbjct: 255 TWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYL 314

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNH 531
           I+ G    G + S LI  Y   G+++ +   F+    A+R D  +W AM++     G   
Sbjct: 315 IRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKR-DEVTWNAMIAGYTQSGQPE 372

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA-YQRTKSIHPFVIKLGFNTEVYVASAV 590
           +A+ +F +++EAG +P    L ++L +C  +G      K IH F ++   +T V+V +A+
Sbjct: 373 KAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTAL 432

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y+KCG+I  A   F         + Y T+I     HG   +A+ +F+ M+   L+P 
Sbjct: 433 IDMYSKCGEITTAENVFG-GMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPD 491

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF+S +SAC++ GLVD+G  L++SMDS +G+  +P  + C+ D+L++ G +E+A   I
Sbjct: 492 AVTFLSAISACNYSGLVDEGLALYRSMDS-FGISATPQHHCCVADLLAKAGRVEEAYEFI 550

Query: 711 EIMPFQPS-PTVYRSLLSGCRIHGNKELGEWASEKLL 746
           E +  + +   ++ SLL+ C+  G +EL +  ++KLL
Sbjct: 551 EGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLL 587



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 256/537 (47%), Gaps = 18/537 (3%)

Query: 81  LQNNLIAMYSKCGYFGWGL-----RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           L+N+L+ +Y+    +         R+FD M +RN+VSW  +    ++ G     L+++V 
Sbjct: 14  LRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVR 73

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKL 193
           M  +GF P   +  ++    V+   S + + ++   +K  +E   + FV  S ++ +++ 
Sbjct: 74  MLEDGFRPTPVSFVNIFPAAVADDPS-WPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEF 132

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINA 252
           GDV +A RVF   +  +   WN MI GY   G   EA+++ S +L    + +D  TF++A
Sbjct: 133 GDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSA 192

Query: 253 LQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           L   S   D  +G+Q+HG +I+       + + NAL+ MY +   +  AF +F+R+ +KD
Sbjct: 193 LTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKD 252

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           +++WNT+   F +N    +   L ++   SG   + VT + +L       DL +G Q   
Sbjct: 253 IVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHG 312

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI----TTWNELLSGYCFNC 427
             +  G ++ E + S LI M+ + G VEMA  VFD  S+KN      TWN +++GY  + 
Sbjct: 313 YLIRHG-IEGEGLESYLIDMYAKSGRVEMAQRVFD--SFKNAKRDEVTWNAMIAGYTQSG 369

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSCGYIC 486
                +  F  + E+G+E    T   V+  C         G QIH   ++    +  ++ 
Sbjct: 370 QPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVG 429

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++LI  Y   G++  +     G       ++  M+S L   G   +A+ +F+S+ E G K
Sbjct: 430 TALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 489

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           PD     + +++C   G      +++  +   G +        V D  AK G ++ A
Sbjct: 490 PDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEA 546



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 231/489 (47%), Gaps = 14/489 (2%)

Query: 65  QVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q++G +VK G  + ND+F+ ++ I M+S+ G      RVFD  A++N   W  +++  +Q
Sbjct: 103 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 162

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFALKIRIEKN 179
           NG+F   + ++  +  +  +P    V + +    +   S+    G  +H + +K      
Sbjct: 163 NGQFSEAIDLFSKILGSREVP--LDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTL 220

Query: 180 PFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           P + G +++  Y++ G+V  A  +F  +   D+  WN M+  +    +  E L +V  M 
Sbjct: 221 PVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQ 280

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G   D  T    L   S   D  IG+Q HG +IR  +E    + + LIDMY KS  ++
Sbjct: 281 KSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVE 339

Query: 299 YAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
            A +VF+  + A +D ++WN +  G++++  P +   +F   + +G  P  VT + +L  
Sbjct: 340 MAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPA 399

Query: 357 CGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
           C  +   +  G Q+ C A+         V ++LI M+ +CG +  A +VF  ++ K+  T
Sbjct: 400 CDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVT 459

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +  ++SG   +      L  F ++ E G++ +  TF   +  C  S        ++ ++ 
Sbjct: 460 YTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMD 519

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEA 533
             G S+       +       G+++ ++EF    G E   +A WG+++++   QG    A
Sbjct: 520 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 579

Query: 534 VTIFHSLVE 542
             +   L++
Sbjct: 580 KLVTKKLLD 588



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 9/386 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
           D +    +L+ +   +   LG Q+HG+++K +  T  + L N L+ MYS+CG       +
Sbjct: 185 DVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDL 244

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           FD + E+++V+W  +V+A IQN +FD+ GL +  +M+ +GF  +   + +V+    + G 
Sbjct: 245 FDRLPEKDIVTWNTMVTAFIQN-DFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGD 303

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
            + G   H + ++  IE    +   +++ YAK G V  A+RVF S   +  D   WNAMI
Sbjct: 304 LQIGKQAHGYLIRHGIEGEG-LESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMI 362

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADFDIGRQIHGLIIRSEV 277
            GY   G   +A+ V  +ML  G+     T  + L  C  V      G+QIH   +R  +
Sbjct: 363 AGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCL 422

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ +  ALIDMY K   +  A  VF  M  K  +++ T+  G  ++    +  +LF+ 
Sbjct: 423 DTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNS 482

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +P+ VTF   +  C     +D GL L       G          +  +  + G 
Sbjct: 483 MQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKAGR 542

Query: 398 VEMAHSVFDNVSYKN--ITTWNELLS 421
           VE A+   + +  +   +  W  LL+
Sbjct: 543 VEEAYEFIEGLGEEGNFVAIWGSLLA 568



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 160/327 (48%), Gaps = 20/327 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L   LS S N     +G Q HG++++ G   +  L++ LI MY+K G      RVF
Sbjct: 287 DSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGE-GLESYLIDMYAKSGRVEMAQRVF 345

Query: 103 DEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           D    A+R+ V+W  +++   Q+G+ +  + ++  M   G  P    + SV+  C  +G 
Sbjct: 346 DSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGG 405

Query: 161 SEF-GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IHCFA++  ++ N FVG ++++ Y+K G++  AE VF  ++      +  MI 
Sbjct: 406 GVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMIS 465

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH------GLII 273
           G    G+G +AL + +SM  +G+  D  TF++A+  C+     D G  ++      G+  
Sbjct: 466 GLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISA 525

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD--VISWNTLFGGFSENKNPGQT 331
             +  C ++      D+  K+  ++ A++  E + ++   V  W +L     + +   + 
Sbjct: 526 TPQHHCCVA------DLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLAS-CKAQGKQEL 578

Query: 332 ASLFHKFILSGSRP-NHVTFSILLRQC 357
           A L  K +L   +   H  +S+LL Q 
Sbjct: 579 AKLVTKKLLDIEKQYGHAGYSVLLSQV 605


>gi|255550217|ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223544645|gb|EEF46161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1439

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 171/621 (27%), Positives = 306/621 (49%), Gaps = 32/621 (5%)

Query: 66   VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
            VHG+ VK+G   D+F+   L+ +YSK G       +FD M ER++V W +++ A ++ G 
Sbjct: 832  VHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYVEMGL 891

Query: 126  FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI-HCFALKIRIEKNPFVGC 184
                L  +     +G  P++ ++      CV  G SE GY     +  +I+         
Sbjct: 892  VKEALSFFSQFHQSGLRPDDASM-----RCVVSGISEVGYDTGRRYIEQIQ--------- 937

Query: 185  SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-IT 243
                        A A ++F+   + DV  WN  +  Y   G  + A++   +ML    + 
Sbjct: 938  ------------AYATKLFFCDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVK 985

Query: 244  MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
             D  T +  L   +   D  +G+ IHG+ ++S  +  +S+ N+LI+MY K   +  A  V
Sbjct: 986  YDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTV 1045

Query: 304  FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD- 362
            F  M + D+ISWN++   +++N    ++ +L    +  G +P+H T + +L+ C  L + 
Sbjct: 1046 FTGMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEG 1105

Query: 363  LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            L L  Q+         + E  V+++LI ++ R G +  A  +F+N +  ++  WN ++ G
Sbjct: 1106 LFLSKQIHVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAWNAMMFG 1165

Query: 423  YCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y   C D D  LK F  + E G   +  T     + C      +   QIH   IK G +S
Sbjct: 1166 YII-CGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNS 1224

Query: 482  CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              ++ S ++  Y+  G +++     +     D  +W  M+S  V  G    A++++  + 
Sbjct: 1225 DLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSVYRQMR 1284

Query: 542  EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
             +G  PDEY   T++ + + + A ++ + IH  VIKL   ++ +V +++ID YAKCG I+
Sbjct: 1285 LSGILPDEYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIE 1344

Query: 602  GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
             A   F +  +  +++V+N ++++ A HG   EA+ +F  M+  +++P + TF+ V+SAC
Sbjct: 1345 DAYCLF-RRMDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDKVTFIGVLSAC 1403

Query: 662  SHKGLVDKGCLLFKSMDSQYG 682
            SH G V +    F SM   YG
Sbjct: 1404 SHSGHVSEAYGHFHSMHKDYG 1424



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 179/683 (26%), Positives = 327/683 (47%), Gaps = 37/683 (5%)

Query: 62   LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            LG  +H +I+  G T+D FL NNLI MYSKCG      ++FD   +R+LV+W  ++SA  
Sbjct: 722  LGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDRDLVTWNAVLSAYA 781

Query: 122  QNGEFDM-----GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
            ++ E +      G  ++  ++      ++  +  ++K+C+  G      ++H +A+KI +
Sbjct: 782  RSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKLCLLSGYVCASQAVHGYAVKIGL 841

Query: 177  EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
            E + FV  +++N Y+K G V  A  +F  +   DV  WN M+  Y   G   EAL+  S 
Sbjct: 842  ELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKAYVEMGLVKEALSFFSQ 901

Query: 237  MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
                G+  D  +    + G S V  +D GR+             I  + A          
Sbjct: 902  FHQSGLRPDDASMRCVVSGISEVG-YDTGRRY------------IEQIQA---------- 938

Query: 297  MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLR 355
              YA K+F    + DV+ WN     + +          F   + S   + ++VT  ++L 
Sbjct: 939  --YATKLFFCDDNTDVVMWNKKLSEYLQAGAFWAAVDCFINMLTSSHVKYDNVTLVVVLA 996

Query: 356  QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
                  DL LG  +  + L  GF    +V +SLI M+ + G V +AH+VF  ++  ++ +
Sbjct: 997  AATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLIS 1056

Query: 416  WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR-SENQQMVGQIHGAI 474
            WN ++S Y  N    + +     +   G++ +  T   V++ C   +E   +  QIH  +
Sbjct: 1057 WNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYV 1116

Query: 475  IKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
             KT   +  ++ ++LI  Y   G + +  F F N   + D+A+W AMM   +  G + + 
Sbjct: 1117 TKTSIIAENFVSTALIDVYSRSGLMAEAEFIFEN-KNKFDLAAWNAMMFGYIICGDHDKG 1175

Query: 534  VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
            + +F  + E GE  DEY L T   +C ++   ++ K IH   IK G N++++++S ++D 
Sbjct: 1176 LKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIKFGLNSDLFLSSGILDM 1235

Query: 594  YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
            Y KCG+++   + FD     +DV  +  +I     +G    A+ ++ +M+L+ + P + T
Sbjct: 1236 YIKCGNMEDGHLLFDNIPVPDDV-AWTIMISGCVENGDEDRALSVYRQMRLSGILPDEYT 1294

Query: 654  FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            F +++ A S    +++G  +  ++  +      P     L+DM ++ G +EDA  +   M
Sbjct: 1295 FATLIKASSCLTALEQGRQIHANV-IKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRRM 1353

Query: 714  PFQPSPTVYRSLLSGCRIHGNKE 736
              + +  V+ ++L     HG+ E
Sbjct: 1354 DVR-NIVVWNAMLVSLAQHGHGE 1375



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 213/427 (49%), Gaps = 1/427 (0%)

Query: 36   SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
            + S ++ D + L   L+ +      +LG  +HG  +K GF + + + N+LI MYSK G+ 
Sbjct: 980  TSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFV 1039

Query: 96   GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
                 VF  M E +L+SW  ++S   QNG     + + V +  +G  P+ F + SV+K C
Sbjct: 1040 SLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVLKAC 1099

Query: 156  VSMGASEF-GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
             S+    F    IH +  K  I    FV  ++++ Y++ G +A AE +F + +  D+  W
Sbjct: 1100 SSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENKNKFDLAAW 1159

Query: 215  NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            NAM+ GY  CG   + L + + M  +G + D+YT   A + C  +   + G+QIH L I+
Sbjct: 1160 NAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQIHALAIK 1219

Query: 275  SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
              +   + + + ++DMYIK   M+    +F+ +   D ++W  +  G  EN +  +  S+
Sbjct: 1220 FGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISGCVENGDEDRALSV 1279

Query: 335  FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
            + +  LSG  P+  TF+ L++    L  L+ G Q+    +      +  V +SLI M+ +
Sbjct: 1280 YRQMRLSGILPDEYTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAK 1339

Query: 395  CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            CG +E A+ +F  +  +NI  WN +L     +    + L  F  +    ++ +  TF  V
Sbjct: 1340 CGIIEDAYCLFRRMDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIKPDKVTFIGV 1399

Query: 455  VETCCRS 461
            +  C  S
Sbjct: 1400 LSACSHS 1406



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 140/618 (22%), Positives = 268/618 (43%), Gaps = 53/618 (8%)

Query: 150  SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
            S+++  VS      G  IH   +   +  + F+  +++  Y+K G V++A ++F      
Sbjct: 709  SLLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDR 768

Query: 210  DVGCWNAMIGGYA--------HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
            D+  WNA++  YA        H   GF    ++       ++  K T    L+ C L   
Sbjct: 769  DLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERF---VSTSKLTLAPMLKLCLLSGY 825

Query: 262  FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
                + +HG  ++  +E  + +  AL+++Y K   +  A  +F+ M ++DV+ WN +   
Sbjct: 826  VCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLWNVMLKA 885

Query: 322  FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL----QLQCLALHCG 377
            + E     +  S F +F  SG RP+  +   ++    + +  D G     Q+Q  A    
Sbjct: 886  YVEMGLVKEALSFFSQFHQSGLRPDDASMRCVVSGISE-VGYDTGRRYIEQIQAYATKLF 944

Query: 378  FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
            F D                         DN    ++  WN+ LS Y         +  F 
Sbjct: 945  FCD-------------------------DNT---DVVMWNKKLSEYLQAGAFWAAVDCFI 976

Query: 438  NIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            N+  S  V+ +  T   V+     + +  +   IHG  +K+GF S   + +SLI  Y   
Sbjct: 977  NMLTSSHVKYDNVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKM 1036

Query: 497  GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
            G +  +     G   LD+ SW +M+S     G   E+V +   L+  G +PD + L ++L
Sbjct: 1037 GFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQPDHFTLASVL 1096

Query: 557  NSCAAI--GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
             +C+++  G +  +K IH +V K     E +V++A+ID Y++ G +  A   F+   N  
Sbjct: 1097 KACSSLTEGLF-LSKQIHVYVTKTSIIAENFVSTALIDVYSRSGLMAEAEFIFENK-NKF 1154

Query: 615  DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            D+  +N ++  Y   G   + +++F  M        + T  +   AC     +++G  + 
Sbjct: 1155 DLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVRLEQGKQI- 1213

Query: 675  KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             ++  ++G+         ++DM  + G +ED   + + +P  P    +  ++SGC  +G+
Sbjct: 1214 HALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPV-PDDVAWTIMISGCVENGD 1272

Query: 735  KE--LGEWASEKLLLLLP 750
            ++  L  +   +L  +LP
Sbjct: 1273 EDRALSVYRQMRLSGILP 1290


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 161/552 (29%), Positives = 280/552 (50%), Gaps = 6/552 (1%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN MI    + G+  + LN+ SSM   G+  +  T+   L+ C+ +     G  +HG ++
Sbjct: 14  WNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHVL 73

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           +   +    +  AL+DMY K S +  A +VF+ M  + V+SWN +   +S   +  Q  S
Sbjct: 74  KLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALS 133

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLD---LGLQLQCLALHCGFLD-EENVTSSLI 389
           L  +  + G  P   TF  +L     L   +   LG  + C  +  G +  E ++ +SL+
Sbjct: 134 LLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLM 193

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +   ++ A  VFD +  K+I +W  ++ GY       +    F  +    V ++  
Sbjct: 194 GMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFV 253

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
            F  ++  C +  +  +   +H  ++K G +    + + LI  Y   G L ++    +  
Sbjct: 254 VFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLI 313

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
               M SW +M++  VH GH  EA+ +F  ++    +P+   L T++++CA +G+    +
Sbjct: 314 IEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQ 373

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            I  ++   G  ++  V +++I  Y+KCG I  AR  F++     D+ V+ ++I +YA H
Sbjct: 374 EIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFER-VTDKDLTVWTSMINSYAIH 432

Query: 630 GLVSEAMEIFDKMKLAN-LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           G+ +EA+ +F KM  A  + P    + SV  ACSH GLV++G   FKSM   +G+ P+ +
Sbjct: 433 GMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVE 492

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
              CL+D+L R G L+ A + I+ MP      V+  LLS CRIHGN ELGE A+ +LL  
Sbjct: 493 HCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDS 552

Query: 749 LPKNDAAHVLLS 760
            P +  ++VL++
Sbjct: 553 SPGSSGSYVLMA 564



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 230/475 (48%), Gaps = 7/475 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL S   GT +HGH++KLGF  D F+Q  L+ MYSKC +     +VFDEM +R++VSW  
Sbjct: 58  NLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNA 117

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFAL 172
           +VSA  +    D  L +  +M   GF P      S++    ++ + EF   G SIHC  +
Sbjct: 118 MVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLI 177

Query: 173 KIRIEK-NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           K+ I      +  S++  Y +   +  A +VF  +    +  W  MIGGY   G+  EA 
Sbjct: 178 KLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAY 237

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +   M  + + +D   F+N + GC  V D  +   +H L+++        + N LI MY
Sbjct: 238 GLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMY 297

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A ++F+ + +K ++SW ++  G+    +PG+   LF + I +  RPN  T +
Sbjct: 298 AKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLA 357

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            ++  C  L  L +G +++      G   ++ V +SLI+M+ +CG++  A  VF+ V+ K
Sbjct: 358 TVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDK 417

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++T W  +++ Y  +    + +  F  +  + G+  +   +  V   C  S   +   + 
Sbjct: 418 DLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKY 477

Query: 471 HGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSA 523
             ++ K  G +     C+ LI      GQLD +     G    +    WG ++SA
Sbjct: 478 FKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSA 532



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 267/580 (46%), Gaps = 7/580 (1%)

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R+L +W L++  +  NG F   L +Y  M  +G   N      ++K C ++ + + G  
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H   LK+  + + FV  ++++ Y+K   VA+A +VF  +    V  WNAM+  Y+    
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLIIR-SEVECSIS 282
             +AL+++  M   G      TF++ L G S +  F+   +G+ IH  +I+   V   +S
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+L+ MY++   MD A KVF+ M +K +ISW T+ GG+ +  +  +   LF++     
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              + V F  L+  C ++ DL L   +  L L CG  +++ V + LI M+ +CG +  A 
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +FD +  K++ +W  +++GY       + L  F  +  + +  NG T   VV  C    
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLG 367

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           +  +  +I   I   G  S   + +SLI  Y   G +  + E        D+  W +M++
Sbjct: 368 SLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMIN 427

Query: 523 ALVHQGHNHEAVTIFHSLVEA-GEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGF 580
           +    G  +EA+++FH +  A G  PD  +  ++  +C+  G  +   K         G 
Sbjct: 428 SYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGI 487

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
              V   + +ID   + G +  A  A           V+  L+ A   HG V E  E+  
Sbjct: 488 TPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNV-ELGELAT 546

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
              L +   S  ++V + +  +  G   +  ++  SMD +
Sbjct: 547 VRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGK 586



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 1/126 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +   LA  +S   +L S  +G ++  +I   G  +D  +Q +LI MYSKCG      
Sbjct: 349 IRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAR 408

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSM 158
            VF+ + +++L  WT ++++   +G  +  + ++  M T  G MP+     SV   C   
Sbjct: 409 EVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHS 468

Query: 159 GASEFG 164
           G  E G
Sbjct: 469 GLVEEG 474


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 177/581 (30%), Positives = 285/581 (49%), Gaps = 24/581 (4%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +A A +VF  I + D   +NA+I  Y+  G    A+++  SML   +  +KYTF   L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + CS + D   GR IH     + +   + +  ALID+YI+ +    A  VF +M  +DV+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFIL--------SGSRPNHVTFSILLRQCGKLLDLDL 365
           +WN +  G++ +        ++H  I          G RPN  T   LL    +   L  
Sbjct: 168 AWNAMLAGYANH-------GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 366 GLQLQCLALH-CGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           G  +    L  C   +EE V   ++L+ M+ +C  +  A  VF  +  +N  TW+ L+ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 423 YCFNCCD--ADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +    CD   +    F ++   G+  ++  +    +  C    +  M  Q+H  I K+G 
Sbjct: 281 FVL--CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            +     +SL+  Y   G ++ +  F +     D  S+GA++S  V  G   EA  +F  
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKK 398

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +     +PD   + +++ +C+ + A Q  K  H  VI  G   E  + +++ID YAKCG 
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGK 458

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  +R  FD+   + DV+ +NT+I  Y  HGL  EA  +F  MK     P   TF+ +++
Sbjct: 459 IDLSRQVFDK-MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLV +G   F +M  +YG+ P  + Y C+VD+L+R G L++A   I+ MP +   
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ +LL  CRIH N +LG+  S  +  L P+     VLLS
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 19/463 (4%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           G   D+F+   LI +Y +C  FG    VF +M  R++V+W  +++    +G +   +   
Sbjct: 130 GLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHL 189

Query: 134 VDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP---FVGCSVLNF 189
           +DM+ + G  PN   + S++ +    GA   G SIH + L+  +E+N     +G ++L+ 
Sbjct: 190 LDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDM 249

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK   +  A RVF+ +   +   W+A+IGG+  C    EA N+   ML EG+     T 
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 250 I-NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + +AL+ C+ +AD  +G Q+H LI +S +   ++  N+L+ MY K+  ++ A   F+ +A
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            KD IS+  L  G  +N    +   +F K       P+  T   L+  C  L  L  G  
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKC 429

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
                +  G   E ++ +SLI M+ +CG ++++  VFD +  +++ +WN +++GY  +  
Sbjct: 430 SHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGL 489

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---HGAIIKTGFSS 481
             +    F  +   G   +  TF  ++  C  S    E +     +   +G + +     
Sbjct: 490 GKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEH-- 547

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
             YIC  ++      G LD +++F      + D+  WGA++ A
Sbjct: 548 --YIC--MVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 208/476 (43%), Gaps = 5/476 (1%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G      +VFD +   +  ++  ++ A    G F   + +Y  M      PN++    V+
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++     G +IH  A    +  + FV  ++++ Y +      A  VF  +   DV 
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            WNAM+ GYA+ G    A+  +  M    G+  +  T ++ L   +       G  IH  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 272 IIRS---EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
            +R+   + E  + I  AL+DMY K   + YA +VF  M  ++ ++W+ L GGF      
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 329 GQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            +  +LF   ++ G    +  + +  LR C  L DL +G QL  L    G   +   ++S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ + G +  A   FD ++ K+  ++  LLSG   N    +    F  +    +E +
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C      Q     HG++I  G +    IC+SLI  Y   G++D S +  +
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                D+ SW  M++     G   EA T+F  +   G  PD+     ++ +C+  G
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 8/416 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND---IFLQNNLIAMYSKCGYFG 96
           LR +   L   L L     +   GT +H + ++     +   + +   L+ MY+KC    
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVC 155
           +  RVF  M  RN V+W+ ++   +          ++ DM   G    +  +V S ++VC
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC 317

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S+     G  +H    K  I  +     S+L+ YAK G +  A   F  I+  D   + 
Sbjct: 318 ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYG 377

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           A++ G    G   EA  V   M    +  D  T ++ +  CS +A    G+  HG +I  
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +    SI N+LIDMY K   +D + +VF++M  +DV+SWNT+  G+  +    +  +LF
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
                 G  P+ VTF  L+  C     +  G      +    G L        ++ +  R
Sbjct: 498 LGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 557

Query: 395 CGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNG 448
            G ++ A+    ++  K ++  W  LL G C    + D+ K    I +  G E  G
Sbjct: 558 GGLLDEAYQFIQSMPLKADVRVWGALL-GACRIHKNIDLGKQVSRIIQKLGPEGTG 612


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 175/626 (27%), Positives = 309/626 (49%), Gaps = 20/626 (3%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF-----VGCSVLNFYAKLGDVAA 198
           NE +V   +K  V   A +    I    ++  + K+ F     +  + L+FY KLG +  
Sbjct: 47  NEVSVVLWVKFAVGTRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYY 106

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+ +F  +   DV  WNA+I GY+  GY ++AL V   ML EG    + T +  +  C  
Sbjct: 107 AQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGR 166

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
                 G+ IHG  I+S ++    + NAL  MY K + +  A  +FE + +K  +SWNT+
Sbjct: 167 PDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTM 226

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
            G + +N    +   +F +        N+VT   LL     L          C  +  GF
Sbjct: 227 IGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHLDST------HCYVIKTGF 280

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             + +V +SL+  +  CG +E A  +++ +  +N+ +   ++SGY        V++ F  
Sbjct: 281 ATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQ 340

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGAIIKTGFSSCGYICSSLIKSYVN 495
           + +  ++ +      ++       +   +G    IH   +KTG  +   + + LI  Y  
Sbjct: 341 MLQLKMKPDAVAMVSILHG---FTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSK 397

Query: 496 FGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
           FG ++  F  FS   E+  + SW +++SA +  G   +A+ +F  +   G  PD   + +
Sbjct: 398 FGDIETVFSLFSEMGEK-QLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIAS 456

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +L  C+ +G  Q  + +H +V++   + E ++ +A++D Y KCG ++ A   F +S    
Sbjct: 457 LLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVF-KSIKEP 515

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
            +  +NT+I  Y   G    A+  + +M+   L+P + TF+ V+SAC+H GLV +G   F
Sbjct: 516 CLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYF 575

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           +SM   +GM P      C+VD+LSR G+LE+A   ++ M  +P   ++ +LL+ C IH  
Sbjct: 576 RSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQE 635

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLS 760
            +LGE  +++LLLL   +   +VL+S
Sbjct: 636 LKLGECLAKRLLLLDYYSGGLYVLMS 661



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 224/502 (44%), Gaps = 6/502 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           +++   Q+  H+ K GF   ++L    +  Y K G   +   +F+EM  R++VSW  ++ 
Sbjct: 68  TKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALIC 127

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              +NG     L+++V M   GF P +  +  ++  C        G +IH F +K  ++ 
Sbjct: 128 GYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDL 187

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  V  ++ + YAK  D+ AAE +F  I       WN MIG Y   G   EA+ V   M 
Sbjct: 188 DCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQ 247

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            E + ++  T I+ L   S  A  D     H  +I++      S++ +L+  Y     ++
Sbjct: 248 KERVEVNYVTIISLL---SANAHLD---STHCYVIKTGFATDASVITSLVCSYAGCGNIE 301

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A  ++  M  ++++S   +  G++E  N G     F + +    +P+ V    +L    
Sbjct: 302 SAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFT 361

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
               +  GL +    L  G   +  V + LI M+ + G +E   S+F  +  K + +WN 
Sbjct: 362 DPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNS 421

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++S        +D ++ FC +   G   +  T   ++  C      Q   ++H  +++  
Sbjct: 422 VISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNN 481

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                ++ ++L+  Y+  G+L+++       +   +A+W  M+S     GH H A++ + 
Sbjct: 482 LDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYS 541

Query: 539 SLVEAGEKPDEYILGTILNSCA 560
            + E G KPD      +L++C 
Sbjct: 542 EMQEQGLKPDRITFLGVLSACT 563



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 213/497 (42%), Gaps = 39/497 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG  +K G   D  ++N L +MY+KC        +F+E+ E+  VSW  ++ A  Q
Sbjct: 173 GKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQ 232

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG FD  + ++  M+      N   + S++     +       S HC+ +K     +  V
Sbjct: 233 NGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHLD------STHCYVIKTGFATDASV 286

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  YA  G++ +A  ++  +   ++    AMI GYA  G     +   + ML   +
Sbjct: 287 ITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKM 346

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D    ++ L G +       G  IH   +++ +     +VN LI MY K   ++  F 
Sbjct: 347 KPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFS 406

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M +K +ISWN++     +         LF +  + G  P+ +T + LL  C ++  
Sbjct: 407 LFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGF 466

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G +L    L      E+ + ++L+ M+ +CG +E A  VF ++    + TWN ++SG
Sbjct: 467 LQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISG 526

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +  +   L  +  + E G++ +  TF  V+  C            HG ++  G    
Sbjct: 527 YGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSAC-----------THGGLVWEG---- 571

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
                   K Y  F  +   F    G +        A M  L+ +    E   IF   +E
Sbjct: 572 --------KRY--FRSMREDFGMIPGLQH------NACMVDLLSRAGFLEEAVIFVKNME 615

Query: 543 AGEKPDEYILGTILNSC 559
              +PD  I G +L SC
Sbjct: 616 V--EPDSAIWGALLTSC 630



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I +A  L+    +     G ++H ++++     + FL+  L+ MY KCG      RVF
Sbjct: 450 DAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVF 509

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             + E  L +W  ++S    +G     L  Y +M+  G  P+      V+  C   G
Sbjct: 510 KSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGG 566


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 162/589 (27%), Positives = 304/589 (51%), Gaps = 9/589 (1%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E   F    +++FY+K  D+ +A  VF  +   +   WN ++  +   G   EAL +   
Sbjct: 59  ESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKK 118

Query: 237 MLFEGITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           M   G+  D +TF    +   SL +D  +G+ +H   ++      +   N +I++Y +  
Sbjct: 119 MRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCG 178

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            + Y   +F+ M+ +D++SW ++  G+    N      LF+K  L    PN VT  ++L+
Sbjct: 179 CVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLE-MEPNSVTLIVMLK 237

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    +   G QL C  +  G L   +V +S++ M+   G+ +   S+F  +  +++ +
Sbjct: 238 GCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVIS 297

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN L+  Y     DA+ +    N     V ++  T   V+    +  N     ++H   I
Sbjct: 298 WNTLIGFYALRG-DAEEMVCGFNQMRGEVALSSETLTLVISVFAKIGNLVEGEKLHSFSI 356

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G      + +SL+  Y   G+L NS +          ++W  MMS  +  G+  EA+ 
Sbjct: 357 KVGLCD-DVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIH 415

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF----NTEVYVASAVI 591
           +F  +  +G +    ILG+++++C+ +G+ Q  K IH ++ +  F       +++ ++++
Sbjct: 416 LFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSIL 475

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           + Y +CG I  AR  F++   + D I + ++I  Y  HG+  EA+++F++M +  + P++
Sbjct: 476 NMYIRCGSISSAREYFNRMV-AKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNR 534

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF+S++SACSH GL+ +GC LF SM   +GM+P  D Y C+VD+L R G +++A  +I 
Sbjct: 535 VTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMII 594

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            M       ++ +L++ CR+HG+K++GE+A+++LL +   N   + LLS
Sbjct: 595 RMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTLLS 643



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/603 (22%), Positives = 274/603 (45%), Gaps = 13/603 (2%)

Query: 65  QVHGHI-VKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q+H  + V  GF   I F    LI+ YSK       + VF  + E N +SW LI+   + 
Sbjct: 46  QIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLD 105

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-FGYSIHCFALKIRIEKNPF 181
            G     L +Y  M+ +G   + F   ++ +  +S+ +    G  +HC A+K+    + +
Sbjct: 106 FGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLGFGYDLY 165

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              +++  YA+ G V     +F  +S  D+  W +MI GY   G  F A  + + M  E 
Sbjct: 166 FCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFNKMRLE- 224

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T I  L+GC    +F  GRQ+H  II++ +    S+ N+++ MY  +       
Sbjct: 225 MEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVE 284

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F  +  +DVISWNTL G ++   +  +    F++     +  +  T ++++    K+ 
Sbjct: 285 SLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSE-TLTLVISVFAKIG 343

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           +L  G +L   ++  G  D+  + +SL+  + +CG +  +  +F  +  ++ +TW  ++S
Sbjct: 344 NLVEGEKLHSFSIKVGLCDDV-LLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMS 402

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G   N    + +  F  +  SGV++       +V+ C    + Q+  +IHG + +  F  
Sbjct: 403 GCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYI 462

Query: 482 CG----YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
                 ++ +S++  Y+  G + ++ E+ N     D  +W +M+      G   EA+ +F
Sbjct: 463 LEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLF 522

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH-PFVIKLGFNTEVYVASAVIDAYAK 596
           + ++     P+     ++L++C+  G  ++   +        G   ++   + ++D   +
Sbjct: 523 NQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGR 582

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG IK A     +     D  ++  L+ +   HG   + +  F   +L  ++     + +
Sbjct: 583 CGKIKEALAMIIRMVVVADSRIWGALVASCRVHG--DKKVGEFAAQRLLEMESDNVGYYT 640

Query: 657 VMS 659
           ++S
Sbjct: 641 LLS 643



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 192/421 (45%), Gaps = 28/421 (6%)

Query: 56  NLKSRVL-GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           +LKS VL G  VH   +KLGF  D++  N +I +Y++CG   +G  +FDEM+ R+LVSWT
Sbjct: 140 SLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWT 199

Query: 115 LIVSAAIQNGE----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            ++S  +  G     F++  KM ++M+     PN   +  ++K C +      G  +HC+
Sbjct: 200 SMISGYVSEGNVFSAFELFNKMRLEME-----PNSVTLIVMLKGCYAYDNFSEGRQLHCY 254

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K  +     V  S+L  Y+  G     E +F  I   DV  WN +IG YA  G   E 
Sbjct: 255 IIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEM 314

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           +   + M  E + +   T    +   + + +   G ++H   I+  + C   ++ +L+D 
Sbjct: 315 VCGFNQMRGE-VALSSETLTLVISVFAKIGNLVEGEKLHSFSIKVGL-CDDVLLASLLDF 372

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  + ++F  +  +   +W  +  G  +N    +   LF +   SG +      
Sbjct: 373 YAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQIL 432

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFL----------DEENVTSSLIYMFCRCGAVEM 400
             L+  C  L  L L     C  +H G+L          D  ++ +S++ M+ RCG++  
Sbjct: 433 GSLVDACSHLGSLQL-----CKEIH-GYLTRNFFYILEGDNIHLGTSILNMYIRCGSISS 486

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   F+ +  K+  TW  ++ GY  +    + LK F  +    V  N  TF  ++  C  
Sbjct: 487 AREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSH 546

Query: 461 S 461
           S
Sbjct: 547 S 547



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLGFT----NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           +L S  L  ++HG++ +  F     ++I L  +++ MY +CG        F+ M  ++ +
Sbjct: 441 HLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNI 500

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +WT ++     +G     LK++  M     +PN     S++  C   G
Sbjct: 501 TWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSG 548


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 177/581 (30%), Positives = 285/581 (49%), Gaps = 24/581 (4%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +A A +VF  I + D   +NA+I  Y+  G    A+++  SML   +  +KYTF   L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + CS + D   GR IH     + +   + +  ALID+YI+ +    A  VF +M  +DV+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFIL--------SGSRPNHVTFSILLRQCGKLLDLDL 365
           +WN +  G++ +        ++H  I          G RPN  T   LL    +   L  
Sbjct: 168 AWNAMLAGYANH-------GMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 366 GLQLQCLALH-CGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           G  +    L  C   +EE V   ++L+ M+ +C  +  A  VF  +  +N  TW+ L+ G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 423 YCFNCCD--ADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +    CD   +    F ++   G+  ++  +    +  C    +  M  Q+H  I K+G 
Sbjct: 281 FVL--CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
            +     +SL+  Y   G ++ +  F +     D  S+GA++S  V  G   EA  +F  
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKK 398

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +     +PD   + +++ +C+ + A Q  K  H  VI  G   E  + +++ID YAKCG 
Sbjct: 399 MQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGK 458

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           I  +R  FD+   + DV+ +NT+I  Y  HGL  EA  +F  MK     P   TF+ +++
Sbjct: 459 IDLSRQVFDK-MPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIA 517

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACSH GLV +G   F +M  +YG+ P  + Y C+VD+L+R G L++A   I+ MP +   
Sbjct: 518 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADV 577

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            V+ +LL  CRIH N +LG+  S  +  L P+     VLLS
Sbjct: 578 RVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLS 618



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 237/491 (48%), Gaps = 22/491 (4%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F+ K+ S   +L++   G  +H H    G   D+F+   LI +Y +C  FG    VF +M
Sbjct: 105 FVLKACSALVDLRA---GRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFG 164
             R++V+W  +++    +G +   +   +DM+ + G  PN   + S++ +    GA   G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221

Query: 165 YSIHCFALKIRIEKNP---FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
            SIH + L+  +E+N     +G ++L+ YAK   +  A RVF+ +   +   W+A+IGG+
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFI-NALQGCSLVADFDIGRQIHGLIIRSEVECS 280
             C    EA N+   ML EG+     T + +AL+ C+ +AD  +G Q+H LI +S +   
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHAD 341

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           ++  N+L+ MY K+  ++ A   F+ +A KD IS+  L  G  +N    +   +F K   
Sbjct: 342 LTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQA 401

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               P+  T   L+  C  L  L  G       +  G   E ++ +SLI M+ +CG +++
Sbjct: 402 CNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDL 461

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +  VFD +  +++ +WN +++GY  +    +    F  +   G   +  TF  ++  C  
Sbjct: 462 SRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSH 521

Query: 461 S----ENQQMVGQI---HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RL 512
           S    E +     +   +G + +       YIC  ++      G LD +++F      + 
Sbjct: 522 SGLVTEGKHWFDTMTHKYGILPRMEH----YIC--MVDLLARGGLLDEAYQFIQSMPLKA 575

Query: 513 DMASWGAMMSA 523
           D+  WGA++ A
Sbjct: 576 DVRVWGALLGA 586



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 208/476 (43%), Gaps = 5/476 (1%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G      +VFD +   +  ++  ++ A    G F   + +Y  M      PN++    V+
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C ++     G +IH  A    +  + FV  ++++ Y +      A  VF  +   DV 
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            WNAM+ GYA+ G    A+  +  M    G+  +  T ++ L   +       G  IH  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 272 IIRS---EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
            +R+   + E  + I  AL+DMY K   + YA +VF  M  ++ ++W+ L GGF      
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287

Query: 329 GQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
            +  +LF   ++ G    +  + +  LR C  L DL +G QL  L    G   +   ++S
Sbjct: 288 TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNS 347

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           L+ M+ + G +  A   FD ++ K+  ++  LLSG   N    +    F  +    +E +
Sbjct: 348 LLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPD 407

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T   ++  C      Q     HG++I  G +    IC+SLI  Y   G++D S +  +
Sbjct: 408 IATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFD 467

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                D+ SW  M++     G   EA T+F  +   G  PD+     ++ +C+  G
Sbjct: 468 KMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 177/416 (42%), Gaps = 8/416 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND---IFLQNNLIAMYSKCGYFG 96
           LR +   L   L L     +   GT +H + ++     +   + +   L+ MY+KC    
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV 257

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVC 155
           +  RVF  M  RN V+W+ ++   +          ++ DM   G    +  +V S ++VC
Sbjct: 258 YACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVC 317

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S+     G  +H    K  I  +     S+L+ YAK G +  A   F  I+  D   + 
Sbjct: 318 ASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYG 377

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           A++ G    G   EA  V   M    +  D  T ++ +  CS +A    G+  HG +I  
Sbjct: 378 ALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIR 437

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            +    SI N+LIDMY K   +D + +VF++M  +DV+SWNT+  G+  +    +  +LF
Sbjct: 438 GLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLF 497

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCR 394
                 G  P+ VTF  L+  C     +  G      +    G L        ++ +  R
Sbjct: 498 LGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLAR 557

Query: 395 CGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNG 448
            G ++ A+    ++  K ++  W  LL G C    + D+ K    I +  G E  G
Sbjct: 558 GGLLDEAYQFIQSMPLKADVRVWGALL-GACRIHKNIDLGKQVSRIIQKLGPEGTG 612


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 271/512 (52%), Gaps = 11/512 (2%)

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEV---ECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +L+ C+ ++     +QIH  ++R+ +     S S + A   ++  S  + YA  VF ++ 
Sbjct: 46  SLEKCTTMSQL---KQIHAQMLRTCLFVDPFSASKIVAFCALH-DSGSLPYARLVFNQIP 101

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           +    + N++  G++    P Q    +   +L G  P+  TF  L + CG L +   G Q
Sbjct: 102 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQ 158

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           L C +   GF  +  + ++L+ M+  CG +  A  VFD +  K++ +W  ++  Y     
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + +K F  +  + V+ N  T   V+  C RS + +   Q+H  I +TG      + S+
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G    + +  N     ++  W  M++  V      EA+++F+ +  +G K D
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
           +  + ++L +C  +GA +  K +H ++ K     +V + +A++D YAKCG I+ A   F 
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF- 397

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
           Q     DV+ +  LI+  A  G   +A+E+F +M+++ ++P   TFV V++ACSH GLV+
Sbjct: 398 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 457

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           +G   F SM ++YG+QPS + YGC+VDML R G + +A+ +I+ MP  P   V   LLS 
Sbjct: 458 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 517

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CRIHGN  + E A+++L+ L PKN   +VLLS
Sbjct: 518 CRIHGNLVVAERAAQQLIELDPKNGGTYVLLS 549



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 152/295 (51%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H H  KLGF +D ++QN L+ MYS CG      +VFD+M  +++VSW  ++ A  Q
Sbjct: 156 GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQ 215

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  +K++  M+     PNE  + +V+  C      E    +H +  +  I  +  +
Sbjct: 216 WDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVL 275

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y K G    A  +F  +   ++ CWN MI G+       EAL++ + M   G+
Sbjct: 276 TSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGV 335

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             DK T  + L  C+ +   ++G+ +H  I + ++E  +++  AL+DMY K   ++ A +
Sbjct: 336 KGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMR 395

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           VF+ M +KDV++W  L  G +      +   LFH+  +S  +P+ +TF  +L  C
Sbjct: 396 VFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/507 (22%), Positives = 214/507 (42%), Gaps = 50/507 (9%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYS--KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           Q+H  +++     D F  + ++A  +    G   +   VF+++      +   I+     
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
                  +  Y  M   G  P+ F   S+ K C   G    G  +HC + K+    + ++
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYI 174

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++N Y+  G + +A +VF  + +  V  W  MIG YA      EA+ +   M    +
Sbjct: 175 QNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASV 234

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ T +N L  C+   D +  +Q+H  I  + +     + +AL+D+Y K      A  
Sbjct: 235 KPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARD 294

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F +M +K++  WN +  G  E+ +  +  SLF++  LSG + + VT + LL  C  L  
Sbjct: 295 LFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGA 354

Query: 363 LDLGLQLQCLALHCGFLDEENVT------SSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           L+LG  L        ++++E +       ++L+ M+ +CG++E A  VF  +  K++ TW
Sbjct: 355 LELGKWLHV------YIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTW 408

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             L+ G          L+ F  +  S V+ +  TF  V+  C            H  ++ 
Sbjct: 409 TALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS-----------HAGLVN 457

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G +               F  + N +      E      +G M+  L   G   EA  +
Sbjct: 458 EGIAY--------------FNSMPNKYGIQPSIEH-----YGCMVDMLGRAGRIAEAEDL 498

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIG 563
             ++  A   PD ++L  +L++C   G
Sbjct: 499 IQNMPMA---PDYFVLVGLLSACRIHG 522



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 111/202 (54%), Gaps = 2/202 (0%)

Query: 58  KSRVLGT--QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +SR L T  QVH +I + G      L + L+ +Y KCG +     +F++M E+NL  W +
Sbjct: 250 RSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNI 309

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +++  +++ +++  L ++ +M+ +G   ++  + S++  C  +GA E G  +H +  K +
Sbjct: 310 MINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEK 369

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           IE +  +G ++++ YAK G + +A RVF  +   DV  W A+I G A CG G +AL +  
Sbjct: 370 IEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFH 429

Query: 236 SMLFEGITMDKYTFINALQGCS 257
            M    +  D  TF+  L  CS
Sbjct: 430 EMQMSEVKPDAITFVGVLAACS 451



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 9/175 (5%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D + +A  L    +L +  LG  +H +I K     D+ L   L+ MY+KCG    
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-- 155
            +RVF EM E+++++WT ++      G+    L+++ +M+ +   P+      V+  C  
Sbjct: 393 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSH 452

Query: 156 ---VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
              V+ G + F    + + ++  IE     GC V +   + G +A AE +  ++ 
Sbjct: 453 AGLVNEGIAYFNSMPNKYGIQPSIEH---YGCMV-DMLGRAGRIAEAEDLIQNMP 503


>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 288/585 (49%), Gaps = 33/585 (5%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           I  + F+   ++  Y+ LG +  A +VF  I        NAM+ GY       + + ++ 
Sbjct: 85  IYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLK 144

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M    +  D YT   AL+ C  + D+++G ++ GL +   +             ++ SS
Sbjct: 145 MMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGG---------RFLGSS 195

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +++                  L G F E  N      LF   + +   P+ VT   L++
Sbjct: 196 ILNF------------------LEGLFREGYN------LFLDMLYNKIEPSAVTMISLIQ 231

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            CG++ +L  G  +    L  G   +  V ++LI M+C+ G VE A  +F+N+  +N+ +
Sbjct: 232 SCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVS 291

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN ++SGY  N    + L+ F  +    V  +  T   +++ C R+ +      +HG I 
Sbjct: 292 WNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIY 351

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + G      + ++++  Y   G L  +       +  ++ SW AM+  L   GH  +A+ 
Sbjct: 352 RRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALK 411

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +       +   L +++  C  +G  +  +S+H  + +  F +EV V +A+ID YA
Sbjct: 412 LFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYA 471

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KC  I  A M F       DVI+YN++I  Y  HGL  +A+ ++ +M    LQP+++TFV
Sbjct: 472 KCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFV 531

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
           S++SACSH GLV++G  LF++M   +   P+   Y C+VD+LSR G L  A+ +I  MPF
Sbjct: 532 SLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPF 591

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            P+  +  +LL+GC +H + ELG   +++LL L  +N + ++ LS
Sbjct: 592 TPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLS 636



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 165/339 (48%), Gaps = 1/339 (0%)

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G F  G  +++DM  N   P+   + S+++ C  M    FG  +H F L   + ++  V 
Sbjct: 202 GLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVL 261

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++++ Y K GDV +A  +F ++ S ++  WN MI GY   G   E L +   ++ + + 
Sbjct: 262 TTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVG 321

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T ++ +Q CS  AD D G+ +HG I R  ++ ++ +  A++D+Y K   + YA  V
Sbjct: 322 FDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSV 381

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FERM +K+VISW  +  G ++N +      LF +        N +T   L+  C  L  L
Sbjct: 382 FERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLL 441

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD-NVSYKNITTWNELLSG 422
             G  +        F  E  V ++LI M+ +C  +  A  VF   ++ K++  +N ++SG
Sbjct: 442 REGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISG 501

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           Y  +      L  +  +   G++ N  TF  ++  C  S
Sbjct: 502 YGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 540



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/576 (21%), Positives = 247/576 (42%), Gaps = 36/576 (6%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D FL   L+A YS  G      +VFDE+ +   V    +V+  +QN  ++  +++   M 
Sbjct: 88  DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
                 + +     +K C+ +   E G  +   A+   +    F+G S+LNF        
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLE------ 201

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
                                      G   E  N+   ML+  I     T I+ +Q C 
Sbjct: 202 ---------------------------GLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 234

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            + +   G+ +HG ++   +     ++  LIDMY KS  ++ A  +FE M  ++++SWN 
Sbjct: 235 EMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 294

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  G+ +N    +T  LF K I+     +  T   L++ C +  DLD G  L       G
Sbjct: 295 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRG 354

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                 + ++++ ++ +CG++  A SVF+ +  KN+ +W  +L G   N    D LK F 
Sbjct: 355 LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFD 414

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +    V  N  T   +V  C      +    +H  + +  F+S   + ++LI  Y    
Sbjct: 415 QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCS 474

Query: 498 QLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +++++   F  G    D+  + +M+S     G  H+A+ ++H +   G +P+E    ++L
Sbjct: 475 KINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLL 534

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEV-YVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           ++C+  G  +   ++   ++K    T    + + ++D  ++ G ++ A    +Q   +  
Sbjct: 535 SACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPT 594

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPS 650
             +  TL+     H  +   +++ D+ + L +  PS
Sbjct: 595 SGILETLLNGCLLHKDIELGVKLADRLLSLESRNPS 630



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 178/376 (47%), Gaps = 12/376 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +++   G  +HG ++  G + D  +   LI MY K G       +F+ M  RNLVSW ++
Sbjct: 236 MRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVM 295

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S  +QNG     L+++  +  +    +   V S++++C      + G  +H F  +  +
Sbjct: 296 ISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGL 355

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N  +  ++++ YAK G +A A  VF  + + +V  W AM+ G A  G+  +AL +   
Sbjct: 356 DLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQ 415

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  E +T +  T ++ +  C+L+     GR +H  + R      + ++ ALIDMY K S 
Sbjct: 416 MQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSK 475

Query: 297 MDYAFKVFER-MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           ++ A  VF+  +  KDVI +N++  G+  +    +   ++H+    G +PN  TF  LL 
Sbjct: 476 INSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLS 535

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSS------LIYMFCRCGAVEMAHSVFDNVS 409
            C        GL  + +AL    + + N T +      ++ +  R G +  A  + + + 
Sbjct: 536 ACSH-----SGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMP 590

Query: 410 YKNITTWNELLSGYCF 425
           +   +   E L   C 
Sbjct: 591 FTPTSGILETLLNGCL 606


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 186/802 (23%), Positives = 349/802 (43%), Gaps = 88/802 (10%)

Query: 19  HATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           H TR       G       +FL          L  S    +   G   H  ++  GF   
Sbjct: 6   HITRSLSPGCPGRPTPAQAAFLATATFSHVYQLCASAGHSALATGQAAHARMLVSGFVPT 65

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY----- 133
           +F+ N L+ MY++CG       VFD M  R+ VSW  +++A    G+  M   +      
Sbjct: 66  MFVSNCLLQMYARCGGAAHAHGVFDTMPHRDTVSWNTMLTAYAHMGDTGMATSLLCVMPD 125

Query: 134 --------------------------VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
                                     ++M   G  P+   +  ++K C  +     G  I
Sbjct: 126 PDVVSWNALLSGYCQRGMFRDLVGLSIEMARCGVAPDRTTLAVLLKACGGLDDLALGVQI 185

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H  A+K  +E +   G ++++ Y K   +  A   F+ +   +   W A+I G   C   
Sbjct: 186 HALAVKTGLEMDVRAGSALVDMYGKCRSLEDALHFFHGMGERNSVSWGAVIAG---C--- 239

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
                V +     G+ +        L  C  +      RQ+H   I+++      +  A+
Sbjct: 240 -----VQNEQYMRGLEL--------LCRCKAITCLSTARQLHAHAIKNKFSSDRVVGTAI 286

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +D+Y K+  +  A + F  + +  V + N +  G        +   LF     SG     
Sbjct: 287 VDVYAKADSLVDARRAFFGLPNHTVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGIGFGV 346

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           V+ S +   C ++   D+ +        C       V ++++ ++ +C A+  A+ VF  
Sbjct: 347 VSLSGVFSACAEVKGFDVDV--------C-------VRNAILDLYGKCKALVEAYLVFQE 391

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  ++  +WN +++    N C  D +     +  SG+E +  T+  V++ C   ++ +  
Sbjct: 392 MEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRSGMEADDFTYGSVLKACAGLQSLEYG 451

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
             +HG  IK+G     ++ S+++  Y   G +  + +  +     ++ SW ++++     
Sbjct: 452 LVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEALKLHDRIGGQELVSWNSIIAGFSLN 511

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
             + EA   F  +++ G KPD +   T+L+SCA +   +  K IH  +IK     + +++
Sbjct: 512 KQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANLATIELGKQIHGQIIKQEMLGDEFIS 571

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           S ++D YAKCG++  +++ F++     D + +N +I  YA HG   EA+E+F++ + AN+
Sbjct: 572 STLVDMYAKCGNMPDSQLMFEK-VQKLDFVSWNAMICGYALHGQGFEALEMFERTQKANV 630

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P+ ATFV+V+ ACSH GL+D GC  F  M S+Y ++P  + + C+          ++A 
Sbjct: 631 APNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYKLEPQLEHFACMGP--------QEAL 682

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK------ 761
             I  MP +    ++++LLS C+I  + E+ E A+  +L L P + + ++LLS       
Sbjct: 683 KFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESG 742

Query: 762 --------RKRQREGNLLDHEG 775
                   R+  R+G L    G
Sbjct: 743 KWVDVSRTRRLMRQGRLKKEPG 764


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 164/578 (28%), Positives = 295/578 (51%), Gaps = 7/578 (1%)

Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           WN+      + G+   AL +   M   GIT +  TF   L+ C+ ++     + IH  ++
Sbjct: 21  WNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVL 80

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           +S  + +I +  A +DMY+K   ++ A  VF  M  +D+ SWN +  GF+++    + + 
Sbjct: 81  KSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSC 140

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L     LSG RP+ VT  +L+    ++  L     +    +  G   + +V ++LI  + 
Sbjct: 141 LLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYS 200

Query: 394 RCGAVEMAHSVFD--NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           +CG +  A ++FD  N   +++ +WN +++ Y         +  +  + + G   +  T 
Sbjct: 201 KCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTI 260

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             ++ +C + +       +H   +K G  S   + ++LI  Y   G + ++    NG   
Sbjct: 261 LNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSD 320

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
               SW  M+SA   +G+  EA+T+F+++  AGEKPD   +  +++ C   GA +  K I
Sbjct: 321 KTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWI 380

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
             + I  G    V V +A+ID YAKCG    A+  F  +  +  V+ + T+I A A +G 
Sbjct: 381 DNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELF-YTMANRTVVSWTTMITACALNGD 439

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
           V +A+E+F  M    ++P+  TF++V+ AC+H GLV++G   F  M  +YG+ P  D Y 
Sbjct: 440 VKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYS 499

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C+VD+L R G+L +A  +I+ MPF+P   ++ +LLS C++HG  E+G++ SE+L  L P+
Sbjct: 500 CMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQ 559

Query: 752 NDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLK 789
               +V ++      E      EGV  +   +K + ++
Sbjct: 560 VAVPYVEMANIYASAEM----WEGVAAIRRNMKYLQVR 593



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 252/562 (44%), Gaps = 52/562 (9%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L     LS    S++    +H H++K  F ++IF+Q   + MY KCG       VF 
Sbjct: 57  PFVLKACAKLSHLRNSQI----IHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFV 112

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV----GSVMKV--CVS 157
           EM  R++ SW  ++    Q+G  D    +   M+ +G  P+   V     S+++V    S
Sbjct: 113 EMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTS 172

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWN 215
           +GA      ++ F ++I +  +  V  +++  Y+K G++ +AE +F  I+S    V  WN
Sbjct: 173 LGA------VYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWN 226

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           +MI  YA+     +A+N    ML  G + D  T +N L  C        G  +H   ++ 
Sbjct: 227 SMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKL 286

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             +  + +VN LI MY K   +  A  +F  M+DK  +SW  +   ++E     +  +LF
Sbjct: 287 GCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLF 346

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
           +    +G +P+ VT   L+  CG+   L+LG  +   +++ G  D   V ++LI M+ +C
Sbjct: 347 NAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKC 406

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G    A  +F  ++ + + +W  +++    N    D L+ F  + E G++ N  TF  V+
Sbjct: 407 GGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVL 466

Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
           + C            HG +++ G                 F  +   +  + G +     
Sbjct: 467 QACA-----------HGGLVERGLEC--------------FNMMTQKYGINPGIDH---- 497

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
            +  M+  L  +GH  EA+ I  S+     +PD  I   +L++C   G  +  K +   +
Sbjct: 498 -YSCMVDLLGRKGHLREALEIIKSM---PFEPDSGIWSALLSACKLHGKMEMGKYVSEQL 553

Query: 576 IKLGFNTEV-YVASAVIDAYAK 596
            +L     V YV  A I A A+
Sbjct: 554 FELEPQVAVPYVEMANIYASAE 575



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/548 (22%), Positives = 226/548 (41%), Gaps = 5/548 (0%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            L +W       +  G     L ++  MK +G  PN      V+K C  +        IH
Sbjct: 17  TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIH 76

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              LK   + N FV  + ++ Y K G +  A  VF  +   D+  WNAM+ G+A  G+  
Sbjct: 77  AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
               ++  M   GI  D  T +  +     V        ++   IR  V   +S+ N LI
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196

Query: 289 DMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
             Y K   +  A  +F+ +    + V+SWN++   ++  +   +  + +   +  G  P+
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T   LL  C +   L  GL +    +  G   +  V ++LI M+ +CG V  A  +F+
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +S K   +W  ++S Y      ++ +  F  +  +G + +  T   ++  C ++   ++
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              I    I  G      +C++LI  Y   G  +++ E         + SW  M++A   
Sbjct: 377 GKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACAL 436

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVY 585
            G   +A+ +F  ++E G KP+      +L +CA  G  +R  +  +    K G N  + 
Sbjct: 437 NGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGID 496

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             S ++D   + G ++ A           D  +++ L+ A   HG +   M  +   +L 
Sbjct: 497 HYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKME--MGKYVSEQLF 554

Query: 646 NLQPSQAT 653
            L+P  A 
Sbjct: 555 ELEPQVAV 562



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 170/361 (47%), Gaps = 16/361 (4%)

Query: 10  FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
           F D+ SC       R  RL G         L  D I   KSL+         LG  V+  
Sbjct: 134 FLDRLSCLL-----RHMRLSGIRPDAVTVLLLIDSILRVKSLT--------SLGA-VYSF 179

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSAAIQNGEFD 127
            +++G   D+ + N LIA YSKCG       +FDE+    R++VSW  +++A     +  
Sbjct: 180 GIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHV 239

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
             +  Y  M   GF P+   + +++  C+   A   G  +H   +K+  + +  V  +++
Sbjct: 240 KAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLI 299

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
             Y+K GDV +A  +F  +S      W  MI  YA  GY  EA+ + ++M   G   D  
Sbjct: 300 CMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLV 359

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T +  + GC      ++G+ I    I + ++ ++ + NALIDMY K  G + A ++F  M
Sbjct: 360 TVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTM 419

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
           A++ V+SW T+    + N +      LF   +  G +PNH+TF  +L+ C     ++ GL
Sbjct: 420 ANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGL 479

Query: 368 Q 368
           +
Sbjct: 480 E 480


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/536 (29%), Positives = 277/536 (51%), Gaps = 13/536 (2%)

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +ML EG  +    ++  L  C  +      R +HG + ++     + +  +L++ Y++  
Sbjct: 68  TMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCG 127

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A ++F+ M +++V++W  L  G++ N  P     +F + +  G  P+H T    L 
Sbjct: 128 AARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLN 187

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    D+DLG Q+   A+  G     ++ +SL  ++ + G+++ A   F  +  KN+ T
Sbjct: 188 ACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVIT 247

Query: 416 WNELLSGYCFNC-CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           W  ++S    +  C    L  F ++   GV  N  T   V+  C    +  +  Q+    
Sbjct: 248 WTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFS 307

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA----------- 523
            K G  +   + +S +  Y+  G+ D +       E   + +W AM+S            
Sbjct: 308 FKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDD 367

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
           L  +    +A+TIF  L  +  KPD +   +IL+ C+A+ A ++ + IH   IK GF ++
Sbjct: 368 LQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSD 427

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           V V SA+++ Y KCG I+ A  AF +   +   + + ++I  Y+ HG   EA+++F++M+
Sbjct: 428 VVVNSALVNMYNKCGCIQDANKAFLE-MPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           LA ++P++ TFVS++SACS+ GLV++    F  M  +Y ++P  D YGC++DM  R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           EDA   I+   F+P+  ++ SL++GCR HGN EL  +A++KLL L PK    ++LL
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILL 602



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 208/405 (51%), Gaps = 12/405 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHGH+ K G   D+F+  +L+  Y +CG      R+FD M ERN+V+WT +V+    N +
Sbjct: 100 VHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQ 159

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             +GL+++V+M   G  P+ + +G+ +  C++    + G  +H +A+K   E    +G S
Sbjct: 160 PALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNS 219

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE-ALNVVSSMLFEGITM 244
           + + YAKLG + +A R F+ I   +V  W  MI   A      E  L++   ML +G+  
Sbjct: 220 LCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMP 279

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  + +  C    D ++G+Q+     +   E ++ + N+ + +Y++    D A ++F
Sbjct: 280 NEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLF 339

Query: 305 ERMADKDVISWNTLFGGFSENKNPG-----------QTASLFHKFILSGSRPNHVTFSIL 353
           E+M D  +I+WN +  G+++  +             Q  ++F     S  +P+  TFS +
Sbjct: 340 EQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSI 399

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  ++ L+ G Q+    +  GFL +  V S+L+ M+ +CG ++ A+  F  +  +  
Sbjct: 400 LSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTF 459

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            TW  ++SGY  +    + ++ F  +  +GV  N  TF  ++  C
Sbjct: 460 VTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSAC 504



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 142/524 (27%), Positives = 241/524 (45%), Gaps = 26/524 (4%)

Query: 147 AVGSVMKV-----CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
           AV S M V     CV MG+     ++H    K     + FV  S++N Y + G    A R
Sbjct: 75  AVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARR 134

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           +F  +   +V  W A++ GY         L V   ML  G     YT    L  C    D
Sbjct: 135 LFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCD 194

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
            D+G+Q+HG  I+   E   S+ N+L  +Y K   +D A + F R+ +K+VI+W T+   
Sbjct: 195 VDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISA 254

Query: 322 FSENKNPGQTA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            +E++   +   SLF   ++ G  PN  T + ++  CG  LDL+LG Q+Q  +   G   
Sbjct: 255 CAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCET 314

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADV------ 432
              V +S +Y++ R G  + A  +F+ +   +I TWN ++SGY    +    D+      
Sbjct: 315 NLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRG 374

Query: 433 ---LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L  F ++  S ++ +  TF  ++  C      +   QIH   IK+GF S   + S+L
Sbjct: 375 FQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSAL 434

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G + ++ +           +W +M+S     G   EA+ +F  +  AG +P+E
Sbjct: 435 VNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNE 494

Query: 550 YILGTILNSCAAIGAYQRTKSIHPF-VIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMA 606
               ++L++C+  G  +  +  H F ++K  +  E  V     +ID + + G ++ A   
Sbjct: 495 ITFVSLLSACSYAGLVEEAE--HYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSF 552

Query: 607 FDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
             ++ F  N+ I +++L+     HG +  A    D  KL  L+P
Sbjct: 553 IKRTGFEPNEAI-WSSLVAGCRSHGNMELAFYAAD--KLLELKP 593



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 189/384 (49%), Gaps = 32/384 (8%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG+ +K G  +   + N+L ++Y+K G     LR F  + E+N+++WT ++SA  
Sbjct: 197 LGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACA 256

Query: 122 QNGE-FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++ E  ++GL +++DM  +G MPNEF + SVM +C +      G  +  F+ KI  E N 
Sbjct: 257 EDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNL 316

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFE 229
            V  S +  Y + G+   A R+F  +    +  WNAMI GYA               GF+
Sbjct: 317 PVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQ 376

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +   +    +  D +TF + L  CS +   + G QIH   I+S     + + +AL++
Sbjct: 377 ALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVN 436

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  A K F  M  +  ++W ++  G+S++  P +   LF +  L+G RPN +T
Sbjct: 437 MYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEIT 496

Query: 350 FSILLRQC--GKLLD-----LDLGLQLQCLAL---HCGFLDEENVTSSLIYMFCRCGAVE 399
           F  LL  C    L++      D+  +  C+     H G          +I MF R G VE
Sbjct: 497 FVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG---------CMIDMFVRLGRVE 547

Query: 400 MAHSVFDNVSYK-NITTWNELLSG 422
            A S      ++ N   W+ L++G
Sbjct: 548 DAFSFIKRTGFEPNEAIWSSLVAG 571



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 14/191 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+   + +   G Q+H   +K GF +D+ + + L+ MY+KCG    
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R  V+WT ++S   Q+G+    ++++ +M+  G  PNE    S++  C  
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 158 MGASEFGYSIHCF-ALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS----SD 209
            G  E   + H F  +K      P V   GC +++ + +LG V   E  F  I       
Sbjct: 507 AGLVE--EAEHYFDMMKKEYCIEPVVDHYGC-MIDMFVRLGRV---EDAFSFIKRTGFEP 560

Query: 210 DVGCWNAMIGG 220
           +   W++++ G
Sbjct: 561 NEAIWSSLVAG 571


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 178/619 (28%), Positives = 299/619 (48%), Gaps = 14/619 (2%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAK---LGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           +H   ++  +  +P V   ++   A      D+  A +VF  ++      WN MI GY  
Sbjct: 37  LHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYNS 96

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLIIRSEVECS 280
           C    +AL +  +M   G++ D YT     Q  +  A +     G  +H L+ R      
Sbjct: 97  CHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASD 156

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +++ LI+ Y  S  ++ A KVFE M ++DV+SW  +   F++            +   
Sbjct: 157 LFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLDEMQS 216

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G++PN +T   LL  CG++  +D GL +       G   + ++ ++LI M+ +CG +  
Sbjct: 217 EGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCMSD 276

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   F  +  +N  +WN L+ G+  N    + L  F  +   GV  +  T   V+ T  +
Sbjct: 277 AWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQ 336

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYIC-SSLIKSYVNFGQLDNS-FEFSNGAERLDMASWG 518
             + Q    +H   IK     C  I  +SLI  Y   G +  +   F N A R D+ SW 
Sbjct: 337 LGDLQQGRYLHN-YIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARR-DIVSWT 394

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           AM+   V       A  +F  +        E  L ++L++C+ +GA  + + IH ++ + 
Sbjct: 395 AMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHSYIKEK 454

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
              T++++ SA++D YAKCG I  A   F +       + +N +I   A  G   EA+ +
Sbjct: 455 SVRTDMWLESALVDMYAKCGCIDAAAEIFSR-MRHKQTLAWNAMIGGLASQGQGKEAVAL 513

Query: 639 FDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           F+++ KL + +P   T   V+ AC+H G+VD+G   F  M +  G+ P  + YGC+VD+L
Sbjct: 514 FEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDNEHYGCIVDLL 572

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            R G L++A + I+ MP QP+P ++ SLL+ CR+H   ELG+   + ++ L P +  AHV
Sbjct: 573 GRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIIDLAPNDVGAHV 632

Query: 758 LLSKRKRQREGNLLDHEGV 776
           L+S    + EG   D E V
Sbjct: 633 LISNLHAE-EGQWDDVEQV 650



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/585 (23%), Positives = 251/585 (42%), Gaps = 16/585 (2%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAERNLVSWTL 115
           SR    ++HG +V+    +D  +   L+ + +         +  +VFD MA+   + W  
Sbjct: 30  SRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNC 89

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA---SEFGYSIHCFAL 172
           ++            L+++  M+ +G  P+ + + +V +   +  +      G ++H    
Sbjct: 90  MIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQ 149

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +I    + FV   ++NFY     V  A +VF  +   DV  W  MI  +A CG     L 
Sbjct: 150 RIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLR 209

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
            +  M  EG   +K T I+ L  C  V   D G  ++  +    +E  + I NALI MY+
Sbjct: 210 SLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYV 269

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   M  A+K F+ M  ++  SWNTL  GF +N    +  ++F + +  G  P+ +T   
Sbjct: 270 KCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVS 329

Query: 353 LLRQCGKLLDLDLGLQLQCL----ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +L    +L DL  G  L        +HC  +    + +SLI M+ +CG +  A  +F+N+
Sbjct: 330 VLSTYAQLGDLQQGRYLHNYIKDHEIHCDII----LQNSLINMYAKCGDMAAAEIIFENM 385

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
           + ++I +W  ++ GY            F ++    V  +      ++  C +        
Sbjct: 386 ARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGR 445

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           +IH  I +    +  ++ S+L+  Y   G +D + E  +        +W AM+  L  QG
Sbjct: 446 EIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQG 505

Query: 529 HNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
              EAV +F  L++  + KPD   L  +L +C  +G           ++ LG   +    
Sbjct: 506 QGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLTLGIVPDNEHY 565

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHHGL 631
             ++D   + G +  A     +     + +++ +L+ A   HH +
Sbjct: 566 GCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRM 610



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 187/376 (49%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A+S +   + K R  G  VH  + ++GF +D+F+ + LI  Y          +VF+EM 
Sbjct: 125 VAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMH 184

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ER++VSWTL++SA  Q G++D  L+   +M++ G  PN+  + S++  C  + A + G  
Sbjct: 185 ERDVVSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLW 244

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           ++    +  IE +  +  +++  Y K G ++ A + F  +   +   WN +I G+   G 
Sbjct: 245 VYARVDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGK 304

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL +   ML +G+  D  T ++ L   + + D   GR +H  I   E+ C I + N+
Sbjct: 305 HKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNS 364

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LI+MY K   M  A  +FE MA +D++SW  +  G+ +        +LF    +     +
Sbjct: 365 LINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMAS 424

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +    LL  C +L  LD G ++           +  + S+L+ M+ +CG ++ A  +F 
Sbjct: 425 EMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFS 484

Query: 407 NVSYKNITTWNELLSG 422
            + +K    WN ++ G
Sbjct: 485 RMRHKQTLAWNAMIGG 500



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/496 (23%), Positives = 228/496 (45%), Gaps = 12/496 (2%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMY---IKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
           ++HG ++R+ +     +   L+ +    +    M YA KVF+RMA    I WN +  G++
Sbjct: 36  ELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMIRGYN 95

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD---LGLQLQCLALHCGFLD 380
               P     LF     SG  P++ T + + +             G  +  L    GF  
Sbjct: 96  SCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFAS 155

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNI 439
           +  V S LI  +    +VE A  VF+ +  +++ +W  ++S +   C   D VL++   +
Sbjct: 156 DLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFA-QCGQWDNVLRSLDEM 214

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              G + N  T   ++  C +         ++  + + G  +   I ++LI  YV  G +
Sbjct: 215 QSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYVKCGCM 274

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            ++++   G    +  SW  ++   V  G + EA+T+F  ++  G  PD   L ++L++ 
Sbjct: 275 SDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVSVLSTY 334

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A +G  Q+ + +H ++     + ++ + +++I+ YAKCGD+  A + F ++    D++ +
Sbjct: 335 AQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF-ENMARRDIVSW 393

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             ++  Y        A  +FD MK+ ++  S+   VS++SACS  G +DKG  +  S   
Sbjct: 394 TAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREI-HSYIK 452

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           +  ++        LVDM ++ G ++ A  +   M  + +   + +++ G    G  +   
Sbjct: 453 EKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQT-LAWNAMIGGLASQGQGKEAV 511

Query: 740 WASEKLLLLL-PKNDA 754
              E+LL L  PK DA
Sbjct: 512 ALFEQLLKLRDPKPDA 527



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 134/292 (45%), Gaps = 3/292 (1%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
            +  SD  +  D I L   LS    L     G  +H +I       DI LQN+LI MY+K
Sbjct: 313 EEMLSDGVI-PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAK 371

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG       +F+ MA R++VSWT +V   ++  +F     ++ DMK    M +E A+ S+
Sbjct: 372 CGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSL 431

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  +GA + G  IH +  +  +  + ++  ++++ YAK G + AA  +F  +     
Sbjct: 432 LSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQT 491

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
             WNAMIGG A  G G EA+ +   +L       D  T    L  C+ V   D G     
Sbjct: 492 LAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFN 551

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           L++   +         ++D+  ++  +D A+   ++M    + + W +L   
Sbjct: 552 LMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAA 603


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 173/658 (26%), Positives = 308/658 (46%), Gaps = 65/658 (9%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH   +   +  +P +   VL F   + ++  A ++       +   WN ++      G 
Sbjct: 54  IHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGC 113

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             E L     M+ +G+ +D  TF   +  C    D  +G ++HG I++     + S+ N 
Sbjct: 114 PQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNN 173

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+ +Y K   +    ++FE+M  +DVISWNT+   +       +   LF + ++SG  P+
Sbjct: 174 LMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQ----------------CLA---LHCGFLDEEN---- 383
            +T   L+  C KL DL++G +L                 CL      CG +DE +    
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293

Query: 384 ----------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
                     + ++L+  + +   ++ A  +FD ++ +++ +W  ++SGY       + L
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  +    V  +      V+  C   E+  +   +H  I+  G    G++ ++L+  Y
Sbjct: 354 ELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLY 413

Query: 494 VNFGQLDNSF-------------------------------EFSNGAERLDMASWGAMMS 522
              G+LD +                                +F N     D+ SW  M++
Sbjct: 414 AKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVN 473

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
           A V     +E+  IF  +  +  KPD+  L ++L+SCA +GA      ++ ++ K     
Sbjct: 474 AYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGI 533

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +  + +A+ID Y KCG ++ A   F Q    N V V+  ++ AYA  G   EA++++ +M
Sbjct: 534 DAMLGTALIDMYGKCGCVEMAYEIFTQIIEKN-VFVWTAMMAAYAMEGQALEAIDLYLEM 592

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +   ++P   TF+++++ACSH GLVD+G   F  + S Y + P+   YGC+VD+L R G+
Sbjct: 593 EERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGH 652

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LE+    IE MP +P  +++ SL+  CR H N EL E A ++L+ + P N+ AHVLLS
Sbjct: 653 LEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLS 710



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 143/697 (20%), Positives = 285/697 (40%), Gaps = 76/697 (10%)

Query: 14  PSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL 73
           P+  F +    IH+    N   S S LR  P ++   L    N++     + +H H++  
Sbjct: 7   PNIFFSSLSPSIHKPPTLNPKTSHSVLR--PHWIIDLLKSCSNIRE---FSPIHAHLITA 61

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
              +D  + + ++A            ++     E   + W  ++   ++ G     L+ Y
Sbjct: 62  NLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECY 121

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             M T G + +      ++  C      + G  +H   LK    +N  +  +++  Y+K 
Sbjct: 122 YHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKC 181

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +    ++F  ++  DV  WN MI  Y   G   EAL++   ML  G+  D+ T ++ +
Sbjct: 182 GKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLV 241

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM----------------------- 290
             C+ + D ++G+++H  I+ +++    S++N L+DM                       
Sbjct: 242 STCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVD 301

Query: 291 ----------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
                     Y+KS+ +D A ++F++M ++ ++SW T+  G+ +     ++  LF +   
Sbjct: 302 VVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRF 361

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQC-------------------LALHCGFLDE 381
               P+ V    +L  C  L D DLG  +                     L   CG LDE
Sbjct: 362 ENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDE 421

Query: 382 ENVT------------SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              T            +S++  FCR G V+ A   F+ +  K+I +WN +++ Y  +   
Sbjct: 422 ALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLF 481

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            +  + FC +  S V+ +  T   ++ +C +         ++  I K        + ++L
Sbjct: 482 NESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTAL 541

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           I  Y   G ++ ++E        ++  W AMM+A   +G   EA+ ++  + E G KPD 
Sbjct: 542 IDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDH 601

Query: 550 YILGTILNSCAAIG----AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
                +L +C+  G     Y+    +  F         ++    ++D   + G ++    
Sbjct: 602 VTFIALLAACSHGGLVDEGYKYFNKLRSF---YNIIPTIHHYGCMVDLLGRVGHLEETVK 658

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
             ++     DV ++++L+ A   H  V  A + F ++
Sbjct: 659 FIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQL 695



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 120/255 (47%), Gaps = 4/255 (1%)

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           ++++      N +    IH  +I         I S ++   ++   LD + +  + +   
Sbjct: 37  WIIDLLKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEP 96

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
           +   W  ++   + +G   E +  ++ +V  G   D      ++++C      +    +H
Sbjct: 97  ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             ++K GF     + + ++  Y+KCG +K     F++     DVI +NT+I  Y   G+ 
Sbjct: 157 GRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEK-MTHRDVISWNTMISCYVLKGMY 215

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL-FKSMDSQYGMQPSPDCYG 691
            EA+++FD+M ++ + P + T VS++S C+    ++ G  L    +D++  ++ S     
Sbjct: 216 REALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGS--LLN 273

Query: 692 CLVDMLSRNGYLEDA 706
           CLVDM S+ G +++A
Sbjct: 274 CLVDMYSKCGKMDEA 288


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 161/570 (28%), Positives = 289/570 (50%), Gaps = 8/570 (1%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AAA RVF  I   D   WN+++  +   G    A  ++ +M  +G+  + +   ++L+ 
Sbjct: 41  LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSSLRS 100

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            +      +G Q+  L  +S +  ++   +AL+ MY K   +  A +VF+ M +++ +SW
Sbjct: 101 AAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSW 160

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L  G+ E+    Q   LF         P+  TF+ LL       +  L  QL    + 
Sbjct: 161 NALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFDDS-NYFLMHQLHGKIVK 219

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLK 434
            G      V+++ I  + +CGA+  +  +FD +   +++ +WN +L  Y ++  D D + 
Sbjct: 220 YGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMG 279

Query: 435 TFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
            F   I ESGV+++  +F  ++ TC   ++ Q    IHG +IK G      +C++LI  Y
Sbjct: 280 FFVRMIRESGVQLDMYSFTSIISTCPEHDDHQGRA-IHGLVIKNGLEGATPVCNALIAMY 338

Query: 494 VNFG---QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
                   ++++ +  +     D  SW +M++       + +A+  F  +  A  + DEY
Sbjct: 339 TRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEY 398

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
                L SC+ +   Q  + IH  +I  GF +  +V+S++I  Y+K G +  A+ +F+++
Sbjct: 399 AFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEA 458

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            +    + +N++I  YA HG       +F++M    +     TFV ++++CSH GLVD+G
Sbjct: 459 -DKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEG 517

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
             +  +M+++YG+    + Y C VD+  R G LE AK +I+ MPF+P   V+ +LL  CR
Sbjct: 518 SEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACR 577

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           IHGN EL    +  LL+  PK  + ++LLS
Sbjct: 578 IHGNMELASEVASHLLVSEPKQHSTYILLS 607



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 155/618 (25%), Positives = 280/618 (45%), Gaps = 23/618 (3%)

Query: 83  NNLIAMYSKCGY-FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF 141
           N L+  YS          RVFDE+   +  SW  +++A +  G       +   M   G 
Sbjct: 28  NQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGV 87

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
             N FA+GS ++   +      G  +   A K  +  N F   ++L+ YAK G V  A R
Sbjct: 88  AANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARR 147

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           VF  +   +   WNA+I GY   G   +AL +  +M  E +  D+ TF       +L+  
Sbjct: 148 VFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATF------AALLTA 201

Query: 262 FD-----IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISW 315
           FD     +  Q+HG I++      +++ NA I  Y +   +  + ++F+++ D +D+ISW
Sbjct: 202 FDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISW 261

Query: 316 NTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           N + G ++ +         F + I  SG + +  +F+ ++  C +  D   G  +  L +
Sbjct: 262 NAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLVI 320

Query: 375 HCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             G      V ++LI M+ R      +E A   FD++  K+  +WN +L+GY  +   AD
Sbjct: 321 KNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSAD 380

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+ F  +  + +  +   F   + +C      Q+  QIHG+II +GF+S  ++ SSLI 
Sbjct: 381 ALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIF 440

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G LD++ +    A++     W +M+      GH H   ++F+ +VE     D   
Sbjct: 441 MYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVT 500

Query: 552 LGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
              ++ SC+  G       I +    + G    +   +  +D Y + G ++ A+   D  
Sbjct: 501 FVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSM 560

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDK 669
               D +V+ TL+ A   HG +  A E+   + ++  +P Q +T++ + S  S  G+   
Sbjct: 561 PFEPDAMVWMTLLGACRIHGNMELASEVASHLLVS--EPKQHSTYILLSSMYSGLGMWSD 618

Query: 670 GCLLFKSMDSQYGMQPSP 687
             ++ + M ++ G+   P
Sbjct: 619 RAIVQREMKNR-GLSKVP 635



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/524 (27%), Positives = 254/524 (48%), Gaps = 30/524 (5%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  SL  +   +   LG Q+     K G  +++F  + L+ MY+KCG      RVFD M 
Sbjct: 94  LGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMP 153

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN VSW  +++  +++G+    L+++++M+T   +P+E    +++    +   S + + 
Sbjct: 154 ERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALL---TAFDDSNY-FL 209

Query: 167 IHCFALKIRIEKNPFVGCSVLN----FYAKLGDVAAAERVFYSI-SSDDVGCWNAMIGGY 221
           +H    KI ++    +G +V N     Y++ G +A + R+F  I  S D+  WNAM+G Y
Sbjct: 210 MHQLHGKI-VKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAY 268

Query: 222 AHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
            + G  ++A+     M+ E G+ +D Y+F + +  C    D   GR IHGL+I++ +E +
Sbjct: 269 TYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDDHQ-GRAIHGLVIKNGLEGA 327

Query: 281 ISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             + NALI MY + SG   M+ A K F+ +  KD +SWN++  G+S++         F  
Sbjct: 328 TPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRC 387

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              +  R +   FS  LR C +L  L LG Q+    +H GF     V+SSLI+M+ + G 
Sbjct: 388 MQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGI 447

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A   F+     +   WN ++ GY  +     V   F  + E  V ++  TF  ++ +
Sbjct: 448 LDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITS 507

Query: 458 CCRS----ENQQMVGQI---HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           C  +    E  +++  +   +G  ++    +CG      +  Y   GQL+ + E  +   
Sbjct: 508 CSHAGLVDEGSEILNAMETRYGIPLRMEHYACG------VDLYGRAGQLEKAKELIDSMP 561

Query: 511 -RLDMASWGAMMSALVHQGHNHEAVTIF-HSLVEAGEKPDEYIL 552
              D   W  ++ A    G+   A  +  H LV   ++   YIL
Sbjct: 562 FEPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYIL 605



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 219/479 (45%), Gaps = 20/479 (4%)

Query: 269 HGLIIRSEVECSISIV--NALIDMYIKSS-GMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           H  +++S   C IS    N L+  Y  S  G+  A +VF+ +   D  SWN+L       
Sbjct: 13  HATLLKS---CIISPTRWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSA 69

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
                   L       G   N       LR         LG QLQ LA   G  D     
Sbjct: 70  GAHPAAWCLLRAMHAQGVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAA 129

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           S+L++M+ +CG V  A  VFD +  +N  +WN L++GY  +      L+ F N+    + 
Sbjct: 130 SALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLV 189

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE- 504
            +  TF  ++ T     N  ++ Q+HG I+K G +    + ++ I +Y   G L  S   
Sbjct: 190 PDEATFAALL-TAFDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRI 248

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYILGTILNSCAAIG 563
           F    +  D+ SW AM+ A  + G +++A+  F  ++ E+G + D Y   +I+++C    
Sbjct: 249 FDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHD 308

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD--QSFNS---NDVIV 618
            +Q  ++IH  VIK G      V +A+I  Y +   I G  M  D  + F+S    D + 
Sbjct: 309 DHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTR---ISGNCMMEDACKCFDSLLIKDTVS 364

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +N+++  Y+ H L ++A+  F  M+ AN++  +  F + + +CS   ++  G  +  S+ 
Sbjct: 365 WNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSI- 423

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
              G   +      L+ M S++G L+DAK   E    + S   + S++ G   HG+  +
Sbjct: 424 IHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEAD-KGSSVPWNSMIFGYAQHGHAHI 481



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 10/187 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D    + +L     L    LG Q+HG I+  GF ++ F+ ++LI MYSK G      
Sbjct: 393 IRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAK 452

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + F+E  + + V W  ++    Q+G   +   ++ +M       +      ++  C   G
Sbjct: 453 KSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAG 512

Query: 160 ASEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
             + G  I       + + +R+E      C V + Y + G +  A+ +  S+    D   
Sbjct: 513 LVDEGSEILNAMETRYGIPLRMEH---YACGV-DLYGRAGQLEKAKELIDSMPFEPDAMV 568

Query: 214 WNAMIGG 220
           W  ++G 
Sbjct: 569 WMTLLGA 575


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 268/530 (50%), Gaps = 36/530 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFS 323
           +Q HG +IR+         + L  M   SS   ++YA KVF+ +   +  +WNTL   ++
Sbjct: 47  KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106

Query: 324 ENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
              +P  +   F   +  S   PN  TF  L++   ++  L LG  L  +A+      + 
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V +SLI+ +  CG ++ A  VF  +  K++ +WN +++G+         L+ F  +   
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYI--- 485
            V+ +  T   V+  C +  N +   Q+   I +                ++ CG I   
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286

Query: 486 --------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
                          ++++  Y      + + E  N   + D+ +W A++SA    G  +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346

Query: 532 EAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA+ +FH L ++   K ++  L + L++CA +GA +  + IH ++ K G     +V SA+
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I  Y+KCGD++ +R  F+ S    DV V++ +I   A HG  +EA+++F KM+ AN++P+
Sbjct: 407 IHMYSKCGDLEKSREVFN-SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF +V  ACSH GLVD+   LF  M+S YG+ P    Y C+VD+L R+GYLE A   I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E MP  PS +V+ +LL  C+IH N  L E A  +LL L P+ND AHVLLS
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 139/589 (23%), Positives = 267/589 (45%), Gaps = 52/589 (8%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY--FGWGLRVFDEM 105
           ++ +SL E   S     Q HGH+++ G  +D +  + L AM +   +    +  +VFDE+
Sbjct: 31  SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFG 164
            + N  +W  ++ A     +  + +  ++DM +     PN++    ++K    + +   G
Sbjct: 91  PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+H  A+K  +  + FV  S+++ Y   GD+ +A +VF +I   DV  WN+MI G+   
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL +   M  E +     T +  L  C+ + + + GRQ+   I  + V  ++++ 
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD-------------------------------KDVI 313
           NA++DMY K   ++ A ++F+ M +                               KD++
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +WN L   + +N  P +   +FH+  L  + + N +T    L  C ++  L+LG  +   
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
               G     +VTS+LI+M+ +CG +E +  VF++V  +++  W+ ++ G   + C  + 
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---HGAIIKTGFSSCGYI 485
           +  F  + E+ V+ NG TF  V   C  +    E + +  Q+   +G + +    +C  I
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC--I 508

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-WGAMMSALVHQGHNHEAVTIFHSLVEAG 544
              L +S    G L+ + +F          S WGA++ A     + + A      L+E  
Sbjct: 509 VDVLGRS----GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564

Query: 545 EKPD-EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            + D  ++L  + N  A +G ++    +   +   G   E   +S  ID
Sbjct: 565 PRNDGAHVL--LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 189/413 (45%), Gaps = 38/413 (9%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           FL K+   +  + S  LG  +HG  VK    +D+F+ N+LI  Y  CG      +VF  +
Sbjct: 136 FLIKA---AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
            E+++VSW  +++  +Q G  D  L+++  M++     +   +  V+  C  +   EFG 
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----------------YSISS 208
            +  +  + R+  N  +  ++L+ Y K G +  A+R+F                 Y+IS 
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312

Query: 209 D--------------DVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINAL 253
           D              D+  WNA+I  Y   G   EAL V   + L + + +++ T ++ L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C+ V   ++GR IH  I +  +  +  + +ALI MY K   ++ + +VF  +  +DV 
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCL 372
            W+ + GG + +    +   +F+K   +  +PN VTF+ +   C     +D    L   +
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT-WNELLSGYC 424
             + G + EE   + ++ +  R G +E A    + +     T+ W  LL G C
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL-GAC 544



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/310 (22%), Positives = 153/310 (49%), Gaps = 12/310 (3%)

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSL--IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           + + Q HG +I+TG  S  Y  S L  + +  +F  L+ + +  +   + +  +W  ++ 
Sbjct: 44  RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103

Query: 523 ALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           A         ++  F  +V   +  P++Y    ++ + A + +    +S+H   +K    
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V+VA+++I  Y  CGD+  A   F  +    DV+ +N++I  +   G   +A+E+F K
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVF-TTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+  +++ S  T V V+SAC+    ++ G  +   ++    +  +      ++DM ++ G
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR-VNVNLTLANAMLDMYTKCG 281

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND--AAHVLL 759
            +EDAK + + M  + + T + ++L G  I  + E    A+ ++L  +P+ D  A + L+
Sbjct: 282 SIEDAKRLFDAMEEKDNVT-WTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALI 336

Query: 760 SKRKRQREGN 769
           S  ++  + N
Sbjct: 337 SAYEQNGKPN 346



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 55/120 (45%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + I L  +LS    + +  LG  +H +I K G   +  + + LI MYSKCG      
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +R++  W+ ++     +G  +  + M+  M+     PN     +V   C   G
Sbjct: 421 EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480


>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 270/514 (52%), Gaps = 5/514 (0%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +IN L+  +  ++F  G  IH   I+  +  ++ + N L++MYIK   +  A ++F+ M 
Sbjct: 8   YINLLRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMP 67

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGL 367
           +++V+SW+++  G   N       SLF      G  +PN  TF   L+ C    ++    
Sbjct: 68  ERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAY 127

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FN 426
           Q+  L +  G      + ++ +    R G +  A  +F+    ++  TWN ++ GY  F+
Sbjct: 128 QIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFS 187

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
                V   + N    GV+ +  TF   +       + +M  Q+H  ++++G+     + 
Sbjct: 188 SEQIPVFWRYMN--REGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVG 245

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +SL+  Y+   +L+  F+  +     D+ SW  M    +  G    A+ +   + + G K
Sbjct: 246 NSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVK 305

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           P+++ L T LN+CA + + +  K  H   IKLG + +V V +A++D YAKCG +  A   
Sbjct: 306 PNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTV 365

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           F +S NS  V+ + T+IMA A +G   EA++IFD+MK  +++P+  TF+ V+ ACS  G 
Sbjct: 366 F-RSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGF 424

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
           VD+G     SMD  YG+ P  D Y C+V +L R G +++AK +I  MPF P   V+++LL
Sbjct: 425 VDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLL 484

Query: 727 SGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           S C+IHG+ E G+ A+E  +     + +++VLLS
Sbjct: 485 SACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLS 518



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 202/400 (50%), Gaps = 4/400 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GT +H + +K      +FLQN+L+ MY KC      L++FDEM ERN+VSW+ +++  + 
Sbjct: 24  GTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVH 83

Query: 123 NGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           NG     L ++  M   GF+ PNEF   S ++ C         Y I+   ++  +E N F
Sbjct: 84  NGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVF 143

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV-SSMLFE 240
           +  + L    + G +  A ++F +    D   WN M+GGY    +  E + V    M  E
Sbjct: 144 LLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNRE 201

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D++TF +AL G + ++   +G Q+H  ++RS     I + N+L+DMY+K+  ++  
Sbjct: 202 GVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEG 261

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           FK F+ +  KDV SW  +  G  +   P    ++  K    G +PN  T +  L  C  L
Sbjct: 262 FKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACL 321

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++ G Q   L +  G   +  V ++L+ M+ +CG ++ A +VF + + +++ +W  ++
Sbjct: 322 ASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMI 381

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
                N    + L+ F  + E+ VE N  TF  V+  C +
Sbjct: 382 MACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQ 421



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 6/376 (1%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           ++ SLSEN+       Q++  +V+ G   ++FL N  +    + G     L++F+    R
Sbjct: 115 QACSLSENVTQ---AYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIR 171

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           + V+W  ++   ++     + +  +  M   G  P+EF   S +    ++ + + G  +H
Sbjct: 172 DTVTWNTMMGGYLEFSSEQIPV-FWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVH 230

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              ++     +  VG S+++ Y K   +    + F  I   DV  W  M  G    G   
Sbjct: 231 AQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPR 290

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            AL V++ M   G+  +K+T   AL  C+ +A  + G+Q HGL I+   +  + + NAL+
Sbjct: 291 MALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALL 350

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K   MD A+ VF     + V+SW T+    ++N  PG+   +F +   +   PN++
Sbjct: 351 DMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYI 410

Query: 349 TFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           TF  +L  C +   +D G + L  +    G +  E+    ++ +  R G ++ A  +   
Sbjct: 411 TFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILR 470

Query: 408 VSY-KNITTWNELLSG 422
           + +   +  W  LLS 
Sbjct: 471 MPFHPGVRVWQTLLSA 486



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 107/218 (49%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D    A +L+    + S  +G QVH  +V+ G+ +DI + N+L+ MY K      G 
Sbjct: 203 VKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGF 262

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           + FDE+  +++ SWT +    +Q GE  M L +   MK  G  PN+F + + +  C  + 
Sbjct: 263 KAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLA 322

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + E G   H   +K+  + +  V  ++L+ YAK G + +A  VF S +S  V  W  MI 
Sbjct: 323 SMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIM 382

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
             A  G   EAL +   M    +  +  TFI  L  CS
Sbjct: 383 ACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACS 420



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 62/126 (49%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +   LA +L+    L S   G Q HG  +KLG   D+ + N L+ MY+KCG      
Sbjct: 304 VKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAW 363

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF     R++VSWT ++ A  QNG+    L+++ +MK     PN      V+  C   G
Sbjct: 364 TVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGG 423

Query: 160 ASEFGY 165
             + G+
Sbjct: 424 FVDEGW 429


>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 179/607 (29%), Positives = 299/607 (49%), Gaps = 47/607 (7%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK   +  A ++F  +    V  WN MI  Y+  G   EAL +V SM    + + + TF
Sbjct: 82  YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTF 141

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY------------------ 291
            + L  C+ +     G+ IH L+++S  E    + +AL+  Y                  
Sbjct: 142 SSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVR 201

Query: 292 -------------IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP-GQTASLFHK 337
                        +  + MD A  VF +M  +DV++W TL  GFS+N +  G+   +F  
Sbjct: 202 RNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRL 261

Query: 338 FILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            + SG + PN  TF  ++R CG+L  L +G  +  L + CG   + ++  +L+  +C C 
Sbjct: 262 MMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECE 321

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A++ A  V   V    +   N L+ G          L +   I ++ +  NG T    V 
Sbjct: 322 AIDDALRVCKGVVNPCLNALNSLIEG----------LISMGRIEDAELVFNGMTEMNPVS 371

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSS--LIKSYVNFGQLDNSFE-FSNGAERLD 513
                +   + GQ+  +        C  I SS  +I  Y   G++D + E F       D
Sbjct: 372 YNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKD 431

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
             +W +M+S  +H G   EA+ ++ ++     +        + ++C+ +G+ Q+ + +H 
Sbjct: 432 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHA 491

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            +IK  F + VYV +++ID Y+KCG I  A+ +F   F+ N V  +  LI  +A+HGL S
Sbjct: 492 HLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPN-VAAWTALINGHAYHGLGS 550

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           EA+ +FD M    L P+ ATFV V+SACS  GLV++G  +F SM+  Y + P+ + Y C+
Sbjct: 551 EAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACV 610

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R+G++ +A+  I+ MP +    V+ +LLS C    + E+GE  +EK+    PK  
Sbjct: 611 VDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPI 670

Query: 754 AAHVLLS 760
           +++V+LS
Sbjct: 671 SSYVILS 677



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 136/590 (23%), Positives = 255/590 (43%), Gaps = 55/590 (9%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           ++I   N  I+ Y+K        ++FD+M +R +VSW  ++S+  ++G F   L +   M
Sbjct: 70  SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
             +    +E    SV+ VC  +     G  IHC  LK   E    VG ++L FYA   ++
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 189

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM----------LFEGI---- 242
             A RVF  +   +   W+ M+ GY  C    +AL+V   M          L  G     
Sbjct: 190 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 249

Query: 243 -------------------TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                              T +++TF   ++ C  +    +GR +HGL+++  +E   SI
Sbjct: 250 DGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 309

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             AL++ Y +   +D A +V + + +  + + N+L  G            +F+      +
Sbjct: 310 GGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM----T 365

Query: 344 RPNHVTFSILLR--QCGKLLDLDLGL--QLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             N V+++++++    G  +D    L  ++ C  +          ++++I ++ R G ++
Sbjct: 366 EMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFS--------SNTMISVYSRNGEID 417

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  +F+   + K+  TWN ++SGY  +    + LK +  +    ++    TF  +   C
Sbjct: 418 KALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHAC 477

Query: 459 -CRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C    QQ  GQ +H  +IKT F S  Y+ +SLI  Y   G +  +          ++A+
Sbjct: 478 SCLGSLQQ--GQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAA 535

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFV 575
           W A+++   + G   EA+++F  ++E G  P+      +L++C+  G      K  H   
Sbjct: 536 WTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSME 595

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
                   +   + V+D   + G I+ A     +     D +V+  L+ A
Sbjct: 596 RCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 645



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 155/388 (39%), Gaps = 40/388 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG ++K G   D  +   L+  Y +C      LRV   +    L +   ++   I
Sbjct: 290 VGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLI 349

Query: 122 QNGEFDMGLKMYVDMK-----TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
             G  +    ++  M      +   M   +AVG  M                    K   
Sbjct: 350 SMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDS-----------------KRLF 392

Query: 177 EKNP----FVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEAL 231
           EK P    F   ++++ Y++ G++  A  +F    ++ D   WN+MI GY H G   EAL
Sbjct: 393 EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEAL 452

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +  +M    I   + TF      CS +     G+ +H  +I++  E ++ +  +LIDMY
Sbjct: 453 KLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMY 512

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A   F  +   +V +W  L  G + +    +  SLF   I  G  PN  TF 
Sbjct: 513 SKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFV 572

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVF 405
            +L  C +   ++ G+++      C      +VT +L +  C      R G +  A    
Sbjct: 573 GVLSACSRAGLVNEGMKIFHSMERC-----YSVTPTLEHYACVVDLLGRSGHIREAEEFI 627

Query: 406 DNVSYK-NITTWNELLSGYCFNCCDADV 432
             +  + +   W  LLS  C+   D +V
Sbjct: 628 KKMPLEADGVVWGALLSA-CWFWMDLEV 654



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/434 (19%), Positives = 174/434 (40%), Gaps = 80/434 (18%)

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
           H   L E   T+  I  + +   +++A  +FD +  + + +WN ++S Y  +   ++ L 
Sbjct: 65  HQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALF 124

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FS 480
              ++  S ++++  TF  V+  C R    +    IH  ++K+G              ++
Sbjct: 125 LVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYA 184

Query: 481 SCGYI-----------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           SC  I                  S ++  YV    +D++        R D+ +W  ++S 
Sbjct: 185 SCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISG 244

Query: 524 LVHQGHN-HEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
               G    +A+ +F  ++ +GE  P+E+    ++ +C  +G     +++H  ++K G  
Sbjct: 245 FSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLE 304

Query: 582 TEVYVASAVIDAYAKC-------------------------------GDIKGARMAFDQS 610
            +  +  A+++ Y +C                               G I+ A + F+  
Sbjct: 305 YDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM 364

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS--VMSACSHKGLVD 668
              N V  YN +I  YA  G + ++  +F+KM      P +  F S  ++S  S  G +D
Sbjct: 365 TEMNPV-SYNLMIKGYAVGGQMDDSKRLFEKM------PCRTIFSSNTMISVYSRNGEID 417

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM---PFQPSPTVYRSL 725
           K   LF+   +    +  P  +  ++     +G  E+A  +   M     Q + + + +L
Sbjct: 418 KALELFEETKN----EKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSAL 473

Query: 726 LSGCRIHGNKELGE 739
              C   G+ + G+
Sbjct: 474 FHACSCLGSLQQGQ 487



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +QR K    +       +E+   +  I  YAK   +  AR  FDQ      V+ +NT+I 
Sbjct: 53  HQRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQ-MPQRTVVSWNTMIS 111

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQ 680
           +Y+ HG  SEA+ +   M  ++++ S++TF SV+S C+    +  G    CL+ KS    
Sbjct: 112 SYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSES 171

Query: 681 YGMQPSPDCY 690
           + +  S   Y
Sbjct: 172 FELVGSALLY 181


>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
 gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
          Length = 660

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 172/660 (26%), Positives = 318/660 (48%), Gaps = 22/660 (3%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA---SEFGY 165
           N+V+W   + A   + +    L+ +  +   G +P+     +V  +  S GA    E  Y
Sbjct: 6   NVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPD-----TVTFINASQGAKTPPEAKY 60

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
              C   +  ++ +  +G +++N +        A RVF +  + ++  WNAM+  Y+  G
Sbjct: 61  LETCRQ-ESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNG 119

Query: 226 YGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           +  E + +   M   + +  DK TF + L  C+ + +   G+  H   + + +E ++ + 
Sbjct: 120 HFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVA 179

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
             LI MY K   ++ A  +F R    DV++W  +   +++N  P +  +LF +  +    
Sbjct: 180 ATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVP--- 236

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ V F+  L  C    +L+ G  ++   +  G   E  V ++++ ++ +C  +     +
Sbjct: 237 PDGVAFATALGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEI 296

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV---EVN-GCTFFYVVETCCR 460
           F  +  ++  +WN +++ Y      A  L  F  +   GV   EV+   +F  V+ +C  
Sbjct: 297 FGRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCAN 356

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
            EN +     H A ++ G      + ++LI+ Y     L+ + +  + +   D+ +W  M
Sbjct: 357 LENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVM 416

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +SA    G   EA+ +F  +      PD     T L +CA     +    +   +++LG 
Sbjct: 417 ISAYAQNGRPQEAIALFFRITV---PPDGVGFATALEACARAENLE-AGVVRAKIVELGL 472

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + E  VA AV+D Y KC +I      FD+     D + +NT++ AYA  G  + ++  F 
Sbjct: 473 DAERAVADAVLDLYGKCAEIVETAEIFDR-MRQRDRVSWNTMVAAYARAGHTAGSLWCFR 531

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M+L  + PS+ + VSV+S  SH GLV++GC  F S+ S YGM PS +  GC+VD+L R 
Sbjct: 532 AMQLEGVCPSEVSLVSVLSTYSHAGLVEQGCQCFASIASDYGMVPSREQQGCVVDLLGRA 591

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G       +  + P   S  +++++LS CRIH + ELG+ A+  +L + P +D+AH++LS
Sbjct: 592 GSWIAEDLIRVVAPSTSSSELWKAVLSSCRIHSDVELGDCAAACVLEMDPGSDSAHIILS 651



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 217/490 (44%), Gaps = 12/490 (2%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           G   DI L N LI M+          RVFD    +N+VSW  ++SA  QNG F+  + ++
Sbjct: 69  GVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALF 128

Query: 134 VDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
             M  T    P++    SV+  C ++     G   H  A++  +E    V  +++  Y+K
Sbjct: 129 KQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSK 188

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINA 252
              +  A  +F    S DV  W  MI  YA  G   EA+ +   M    +  D   F  A
Sbjct: 189 CHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMT---VPPDGVAFATA 245

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  C+   + + GR +   I+   ++   ++ NA++D+Y K + +    ++F RM  +D 
Sbjct: 246 LGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDR 305

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV----TFSILLRQCGKLLDLDLGLQ 368
           +SWNT+   ++   +   +   F    L G  P+ V    +F+ +L  C  L +L  G  
Sbjct: 306 VSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKL 365

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
               A+  G      V ++LI M+ +C  +E A  +F      ++  W  ++S Y  N  
Sbjct: 366 AHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGR 425

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + +  F  I    V  +G  F   +E C R+EN +  G +   I++ G  +   +  +
Sbjct: 426 PQEAIALFFRI---TVPPDGVGFATALEACARAENLE-AGVVRAKIVELGLDAERAVADA 481

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           ++  Y    ++  + E  +   + D  SW  M++A    GH   ++  F ++   G  P 
Sbjct: 482 VLDLYGKCAEIVETAEIFDRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPS 541

Query: 549 EYILGTILNS 558
           E  L ++L++
Sbjct: 542 EVSLVSVLST 551



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/396 (22%), Positives = 177/396 (44%), Gaps = 11/396 (2%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
            Q  S   ++ D +  A  LS   NL++   G   H   V+ G    + +   LI MYSK
Sbjct: 129 KQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSK 188

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        +F      ++V+WT+++SA  QNG     + ++  M      P+  A  + 
Sbjct: 189 CHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVP---PDGVAFATA 245

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C S    E G  +    +++ ++    V  +VL+ Y K  ++     +F  +   D 
Sbjct: 246 LGACASAENLEAGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDR 305

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY----TFINALQGCSLVADFDIGRQ 267
             WN M+  YA  G+   +L    +M  EG+   +     +F + L  C+ + +   G+ 
Sbjct: 306 VSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKL 365

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
            H   + + +E ++ +   LI MY K   ++ A  +F R    DV++W  +   +++N  
Sbjct: 366 AHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGR 425

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
           P +  +LF +  +    P+ V F+  L  C +  +L+ G+ ++   +  G   E  V  +
Sbjct: 426 PQEAIALFFRITVP---PDGVGFATALEACARAENLEAGV-VRAKIVELGLDAERAVADA 481

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           ++ ++ +C  +     +FD +  ++  +WN +++ Y
Sbjct: 482 VLDLYGKCAEIVETAEIFDRMRQRDRVSWNTMVAAY 517



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 96/206 (46%), Gaps = 6/206 (2%)

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           ++ ++ +W A + AL        A+  F SL+  G  PD     T +N+          K
Sbjct: 3   DKTNVVTWNAFIRALASSRDASGALQTFRSLLLQGLVPDTV---TFINASQGAKTPPEAK 59

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +     + G   ++ + +A+I+ +        AR  FD + N N ++ +N ++ AY+ +
Sbjct: 60  YLETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKN-IVSWNAMLSAYSQN 118

Query: 630 GLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           G   E + +F +M     ++P + TF SV+S+C++   + +G L   +   + G++ +  
Sbjct: 119 GHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAA-VEAGLEFAVP 177

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMP 714
               L+ M S+   LE+A+ +    P
Sbjct: 178 VAATLIQMYSKCHCLEEARDIFSRSP 203



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           +ENL++ V    V   IV+LG   +  + + ++ +Y KC        +FD M +R+ VSW
Sbjct: 455 AENLEAGV----VRAKIVELGLDAERAVADAVLDLYGKCAEIVETAEIFDRMRQRDRVSW 510

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
             +V+A  + G     L  +  M+  G  P+E ++ SV+      G  E G    CFA
Sbjct: 511 NTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSVLSTYSHAGLVEQG--CQCFA 566


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 164/596 (27%), Positives = 299/596 (50%), Gaps = 11/596 (1%)

Query: 174 IRIEKNP--FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           IR    P  F+  ++L  Y +  D  +A  +F  +   DV  WN +I GYA  G    AL
Sbjct: 2   IRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSAL 61

Query: 232 NVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
                   +G + +D++T+   L  C    D+  GR  HGL + S +  +  + N++IDM
Sbjct: 62  GAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDM 121

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +D     F+R  ++D +SWN L   +     P   A++      SG   +    
Sbjct: 122 YAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFAL 181

Query: 351 SILLRQCGKLLDL-DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
             +L+ C +L D  D+   L    +  G   +  V S+++ M+ + G +E A  VF ++ 
Sbjct: 182 GGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIP 241

Query: 410 YKNITTWNELLSGYCFNCCDA------DVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
            +N+  +N +++G+     D       + ++ + N++   +  +  TF  V+E C  +  
Sbjct: 242 SQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNA 301

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            +   QIH  +I  GF    +I ++LI  Y     +D+S    +   + ++ +W +M++A
Sbjct: 302 VRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITA 361

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            V   H+ +A+ +F  L   G +PD++ + +++N+CA +      + IH + +K GF+  
Sbjct: 362 FVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRF 421

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
               ++ I+ Y   GD+K A+  F++   S D   ++ +I++YA HG   EA+ +F KM+
Sbjct: 422 TLCGNSQIEMYRCTGDLKAAKKTFER-IPSLDTFSWSQMILSYAVHGHEREALLLFKKMR 480

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
             ++  ++  F++V+ ACSH+GL+D+G   ++SM S Y   P      C+VD+L   G +
Sbjct: 481 DCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKV 540

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            DA+  I     +    ++ +LL  CRIHG+K+ G    EKL+ L P   +++V+L
Sbjct: 541 ADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYVML 596



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/593 (23%), Positives = 258/593 (43%), Gaps = 11/593 (1%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
           +++ G+   +FL NNL+A Y +C        +FD M  R++V+W  +++     G     
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGMPRRDVVTWNTLIAGYATQGSARSA 60

Query: 130 LKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
           L  + D + +G +  + F   +V+  C   G    G + H  A+   + +  FV  SV++
Sbjct: 61  LGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVID 120

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            YAK   +      F      D   WN ++  Y   G+   A NV+  M   G+ +D + 
Sbjct: 121 MYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFA 180

Query: 249 FINALQGCSLVADF-DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
               L+ CS + D  D+ R +HG +I+  ++  + + + ++DMY K+ G++ A KVF  +
Sbjct: 181 LGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSI 240

Query: 308 ADKDVISWNTLFGGFSENKNPG------QTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             ++V+ +NT+  GF+   N        +   ++        RP+  TF  +L  C    
Sbjct: 241 PSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTN 300

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +    Q+    +  GF D+E + ++LI ++ +   V+ +   F     + I TW  +++
Sbjct: 301 AVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMIT 360

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            +  N      L  F  +  +GVE +  T   V+  C          QIH   +K+GF  
Sbjct: 361 AFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDR 420

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
                +S I+ Y   G L  + +       LD  SW  M+ +    GH  EA+ +F  + 
Sbjct: 421 FTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMR 480

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +     +E+    +L +C+  G      +     V    F  +V   + ++D     G +
Sbjct: 481 DCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKV 540

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
             A    + S   ND ++++TL+ A   HG     ++  +  KL  L+P  A+
Sbjct: 541 ADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGE--KLMTLEPFAAS 591



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 202/429 (47%), Gaps = 28/429 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   HG  V  G     F+ N++I MY+KC         FD   ER+ VSW L++SA ++
Sbjct: 96  GRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDEVRLAFDRAEERDEVSWNLLLSAYVR 155

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE-FGYSIHCFALKIRIEKNPF 181
            G  ++   + V M  +G   + FA+G ++K C  +  SE     +H   +K+ ++ + F
Sbjct: 156 MGWPEVAANVLVWMHRSGVELDAFALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVF 215

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG------YGFEALNVVS 235
           VG ++++ YAK G +  A +VF SI S +V  +N MI G+A  G         EA+ + S
Sbjct: 216 VGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYS 275

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +M    I   K+TF + L+ C+L       RQIH  +I    E    I NALI++Y K+ 
Sbjct: 276 NMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKAR 335

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D + + F R   +++ +W ++   F  N++  +  +LF     +G  P+  T S ++ 
Sbjct: 336 LVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMN 395

Query: 356 QCGKLLDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
            C      DL + + C  +HC     GF       +S I M+   G ++ A   F+ +  
Sbjct: 396 ACA-----DLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPS 450

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            +  +W++++  Y  +  + + L  F  + +  V +N   F  V+  C            
Sbjct: 451 LDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACS----------- 499

Query: 471 HGAIIKTGF 479
           H  +I  GF
Sbjct: 500 HQGLIDEGF 508



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 24/268 (8%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H H++  GF +D F+ N LI +YSK       LR F    ++ + +WT +++A ++N 
Sbjct: 307 QIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNE 366

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             D  L ++  ++  G  P++F + SVM  C  +        IHC+A+K   ++    G 
Sbjct: 367 HSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGN 426

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S +  Y   GD+ AA++ F  I S D   W+ MI  YA  G+  EAL +   M    + +
Sbjct: 427 SQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVII 486

Query: 245 DKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDM------------Y 291
           +++ F+  L  CS     D G R    ++        +  +  ++D+            +
Sbjct: 487 NEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDF 546

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLF 319
           I SSG+           + D + W+TL 
Sbjct: 547 INSSGL-----------ENDSVLWHTLL 563



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 169/375 (45%), Gaps = 8/375 (2%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           SE   S  +   +HG ++K+G   D+F+ + ++ MY+K G     ++VF  +  +N+V +
Sbjct: 189 SELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAKNGGLEEAIKVFGSIPSQNVVIY 248

Query: 114 TLIVSAAIQNG-----EFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
             +++   + G     E  M  +++Y +M      P++F   SV++VC    A      I
Sbjct: 249 NTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQI 308

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   +    E + F+G +++N Y+K   V  + R F+     ++  W +MI  +    + 
Sbjct: 309 HAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFTWTSMITAFVRNEHS 368

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            +ALN+   + + G+  D++T  + +  C+ ++      QIH   ++S  +      N+ 
Sbjct: 369 DKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQ 428

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           I+MY  +  +  A K FER+   D  SW+ +   ++ + +  +   LF K        N 
Sbjct: 429 IEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINE 488

Query: 348 VTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             F  +L  C     +D G +  + +     F+ +    + ++ +    G V  A    +
Sbjct: 489 FAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLLGHVGKVADAEDFIN 548

Query: 407 NVSYKNITT-WNELL 420
           +   +N +  W+ LL
Sbjct: 549 SSGLENDSVLWHTLL 563



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/288 (20%), Positives = 118/288 (40%), Gaps = 42/288 (14%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D   ++  ++   +L   +   Q+H + VK GF       N+ I MY   G      
Sbjct: 383 VEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQIEMYRCTGDLKAAK 442

Query: 100 RVFDEMAERNLVSWT-LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + F+ +   +  SW+ +I+S A+   E +  L ++  M+    + NEFA  +V+  C   
Sbjct: 443 KTFERIPSLDTFSWSQMILSYAVHGHERE-ALLLFKKMRDCSVIINEFAFLAVLVACSHQ 501

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G  + G+  +                S+++ Y+ + DV              + C   ++
Sbjct: 502 GLIDEGFRHY---------------ESMVSDYSFVPDV------------KHIACMVDLL 534

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G   H G   +A + ++S    G+  D   +   L+ C +  D D G +    ++  E  
Sbjct: 535 G---HVGKVADAEDFINS---SGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPF 588

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISWNTLFGG 321
            + S V  L ++Y+ +  +  A +   +M ++ +     +SW   FGG
Sbjct: 589 AASSYV-MLYNLYMDAGKISLAMRTRGQMRERGMTKESGVSWAE-FGG 634


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 301/629 (47%), Gaps = 82/629 (13%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           GSV+++C  + +   G  +H       +  +  +G  +++FYA  GD+    RVF ++  
Sbjct: 103 GSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEK 162

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  WN M+  YA  G                                   DF      
Sbjct: 163 KNVYLWNFMVSEYAKIG-----------------------------------DF------ 181

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
                    + SI +   +++  I+    + A ++F+++ D+DVISWN++  G+  N   
Sbjct: 182 ---------KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   ++ + +  G   +  T   +L  C     L LG  +  LA+   F    N +++L
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ +CG ++ A  VF+ +  +N+ +W  +++GY  +      +     + + GV+++ 
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDV 352

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
                ++  C RS +      +H  I     +S  ++C++L+  Y   G ++ +    + 
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 412

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D+ SW  M+  L                     KPD   +  IL +CA++ A +R 
Sbjct: 413 MVVKDIISWNTMVGEL---------------------KPDSRTMACILPACASLSALERG 451

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K IH ++++ G++++ +VA+A++D Y KCG +  AR+ FD    S D++ +  +I  Y  
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMIAGYGM 510

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG  +EA+  F++M+ A ++P + +F+S++ ACSH GL+++G   F  M + + ++P  +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C+VD+LSR G L  A   IE +P  P  T++ +LL GCRI+ + EL E  +E++  L
Sbjct: 571 HYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 630

Query: 749 LPKNDAAHVLLS-------KR---KRQRE 767
            P+N   +VLL+       KR   KR RE
Sbjct: 631 EPENTGYYVLLANIYAEAEKREEVKRMRE 659



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 237/540 (43%), Gaps = 75/540 (13%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGL--------------------RVFDEMAERNLVSWTLIV 117
           +++L N +++ Y+K G F   +                     +FD++ +R+++SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + NG  + GL +Y  M   G   +   + SV+  C + G    G ++H  A+K   E
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +      ++L+ Y+K GD+  A RVF  +   +V  W +MI GY   G+   A+ ++  M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQM 343

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG+ +D     + L  C+     D G+ +H  I  + +  ++ + NAL+DMY K   M
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSM 403

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  VF  M  KD+ISWNT+ G                       +P+  T + +L  C
Sbjct: 404 EGANSVFSTMVVKDIISWNTMVGEL---------------------KPDSRTMACILPAC 442

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L+ G ++    L  G+  + +V ++L+ ++ +CG + +A  +FD +  K++ +W 
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++GY  +    + + TF  + ++G+E +  +F  ++  C            H  +++ 
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQ 551

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+                F  + N F      E      +  M+  L   G+  +A    
Sbjct: 552 GWRF--------------FYIMKNDFNIEPKLEH-----YACMVDLLSRTGNLSKAYKFI 592

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAK 596
            +L  A   PD  I G +L  C      +  + +   V +L   NT  YV  A I A A+
Sbjct: 593 ETLPIA---PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 25/364 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VH   +K  F   I   N L+ MYSKCG     LRVF++M ERN+VSWT +++   
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++G  D  + +   M+  G   +  A+ S++  C   G+ + G  +H +     +  N F
Sbjct: 329 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 388

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G +  A  VF ++   D+  WN M+G                      
Sbjct: 389 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------------E 427

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T    L  C+ ++  + G++IHG I+R+       + NAL+D+Y+K   +  A 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ +  KD++SW  +  G+  +    +  + F++   +G  P+ V+F  +L  C    
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 362 DLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNE 418
            L+ G +   + +   F  E  +   + ++ +  R G +  A+   + +    + T W  
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGA 606

Query: 419 LLSG 422
           LL G
Sbjct: 607 LLCG 610



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 14/189 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   +A  L    +L +   G ++HG+I++ G+++D  + N L+ +Y KCG  G   
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++LVSWT++++    +G  +  +  + +M+  G  P+E +  S++  C   G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA-------KLGDVAAAERVFYSIS-SDDV 211
             E G+          I KN F     L  YA       + G+++ A +   ++  + D 
Sbjct: 548 LLEQGWRF------FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 601

Query: 212 GCWNAMIGG 220
             W A++ G
Sbjct: 602 TIWGALLCG 610


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 275/548 (50%), Gaps = 10/548 (1%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N+++  Y   G   EAL V S+M       D  TF  A + C+ +     GR +H   + 
Sbjct: 81  NSLLRSYTGLGCHREALAVYSAMR----AFDHLTFPFAAKACAGLRLGRHGRAVHCRALA 136

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           +       + NALI MY+    +  A  VF  M ++ V+SWN +  G  +N    +   +
Sbjct: 137 AGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEV 196

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G   +  T   +L  C +  DL+ G  +  L    G  D   V ++LI M+ +
Sbjct: 197 FGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGK 256

Query: 395 CGAVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE-VNGCTFF 452
           C ++E A  VFD+  + K++ +W  ++  Y  N    + +   C +  SG    NG T  
Sbjct: 257 CRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMV 316

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD-NSFEFSNGAER 511
           Y++  C    + +     H   I+ G  S   + ++LI +Y   G++         G+ R
Sbjct: 317 YLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR 376

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            +  +W A +S     G   +A+ +F  ++    +PD   + +IL + A     +  K+I
Sbjct: 377 AE--TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNI 434

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H F++ LGF     +A+ +ID Y+K GD+  A   F Q     DV+ + T+I  Y+ HG 
Sbjct: 435 HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALF-QWLPEKDVVAWTTIIAGYSIHGH 493

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
              A+ ++D+M  +  +P+  T  +++ ACSH G++D+G  +FK M + +G+ P+ + Y 
Sbjct: 494 ARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS 553

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           CLVDML R G +E+A  +I+ MPF+PS +V+ +LL  C +H N E GE A+++L  L P+
Sbjct: 554 CLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613

Query: 752 NDAAHVLL 759
           N  ++VLL
Sbjct: 614 NTGSYVLL 621



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 267/593 (45%), Gaps = 31/593 (5%)

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT-LIVSAAIQNGEF 126
           GH+++    + +F+      +Y  CG       +  +M +   VS++  ++ +    G  
Sbjct: 40  GHLLRYHGLHPLFM------VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCH 93

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
              L +Y  M+    +   FA     K C  +     G ++HC AL      + +V  ++
Sbjct: 94  REALAVYSAMRAFDHLTFPFAA----KACAGLRLGRHGRAVHCRALAAGFGGDTYVQNAL 149

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           ++ Y   GDV AAE VF ++ +  V  WNA+I G    GY   AL V   M  +G+ +D+
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            T ++ L  C+   D + GR +H L+    +   +++ NALIDMY K   ++ A +VF+ 
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH 269

Query: 307 MA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLDLD 364
              DKDV+SW  + G +  N    +  SL  + ++SG+  PN VT   LL  C  +    
Sbjct: 270 CKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGK 329

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
                  L +  G   +  V ++LI  + RCG +++     +  S++   TWN  LSGY 
Sbjct: 330 HAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYT 388

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +  +   ++ F  +    V  +  T   ++     S + +    IH  ++  GF     
Sbjct: 389 VSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTE 448

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I + LI  Y   G LD ++         D+ +W  +++     GH   A+ ++  +VE+G
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESG 508

Query: 545 EKPDEYILGTILNSCA-------AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            KP+   + T+L +C+        I  ++  +++H  +     N E Y  S ++D   + 
Sbjct: 509 GKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMP----NGEHY--SCLVDMLGRA 562

Query: 598 GDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           G I+ A R+  D  F  +   V+  L+ A   H  V E  E+  K +L  L P
Sbjct: 563 GRIEEAHRLIQDMPFEPS-TSVWGALLGACVLHKNV-EFGEVAAK-RLFQLDP 612



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 3/398 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   +  GF  D ++QN LI+MY  CG  G    VF  M  R +VSW  +++  ++
Sbjct: 127 GRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVK 186

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L+++ +M  +G   +   V SV+  C        G ++H       +     V
Sbjct: 187 NGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAV 246

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             ++++ Y K   +  A RVF     D DV  W AMIG Y      FEA+++   ML  G
Sbjct: 247 KNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSG 306

Query: 242 ITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               +  T +  L  C+ +      +  H L IR  ++  I++  ALID Y +   M   
Sbjct: 307 AAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLM 366

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
               ER + +   +WN    G++ +    +   LF + I    RP+  T + +L    + 
Sbjct: 367 RLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAES 425

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            DL  G  + C  L  GFL    + + LI ++ + G ++ A ++F  +  K++  W  ++
Sbjct: 426 ADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTII 485

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +GY  +      +  +  + ESG + N  T   ++  C
Sbjct: 486 AGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYAC 523



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 6/277 (2%)

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTW-NELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           L  ++C CG    AH++   +      ++ N LL  Y    C  + L  +  +       
Sbjct: 51  LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM----RAF 106

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  TF +  + C      +    +H   +  GF    Y+ ++LI  Y++ G +  +    
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                  + SW A+++  V  G+   A+ +F  +   G   D   + ++L +CA      
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             +++H  V   G    V V +A+ID Y KC  ++ AR  FD   +  DV+ +  +I AY
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAY 286

Query: 627 AHHGLVSEAMEIFDKMKLANLQ-PSQATFVSVMSACS 662
             +    EA+ +  +M ++    P+  T V ++SAC+
Sbjct: 287 VLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACA 323



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 6/131 (4%)

Query: 40  LRKDPIFLAKSLSL---SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +R D   +A  L     S +LK    G  +H  ++ LGF     +   LI +YSK G   
Sbjct: 408 VRPDSATMASILPAYAESADLKE---GKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLD 464

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F  + E+++V+WT I++    +G     + +Y  M  +G  PN   + +++  C 
Sbjct: 465 AAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACS 524

Query: 157 SMGASEFGYSI 167
             G  + G  +
Sbjct: 525 HAGMIDEGIKV 535


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/621 (25%), Positives = 312/621 (50%), Gaps = 9/621 (1%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNP---FVGCSVLNFYAKLGDVAAAER 201
           A  +++  C  + A   G  +H   ++  +  ++ P    +   V+  Y + G    A  
Sbjct: 12  ACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALD 71

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS-LVA 260
           VF  +   +V  W ++I  +   G+  +A+ +   ML  G++ D+ TF + L   S    
Sbjct: 72  VFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRER 131

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           + D G+++H  I+++  E    ++N +++MY K   ++ A  VF+ + D +V SW  +  
Sbjct: 132 NLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIA 191

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            +++N +  +   L  +   +G +P+  TF+ +L  C  +  L+    L    +    LD
Sbjct: 192 AYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLD 251

Query: 381 EEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V ++LI ++ +CGA+E A  VF  +  K+I +W+ +++ +  +      ++    +
Sbjct: 252 RDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
              GV  N  TF  V+E     +  Q   +IH  I++ G+S    + S+L+K Y N+G +
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWV 371

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           + +      +   D+ SW +M++          A+++F  +   G +P+     + +++C
Sbjct: 372 ETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDAC 431

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A +GA +R   +H  V  LG + +V VA+A+++ Y KCG ++ A   F       +++ +
Sbjct: 432 AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF-LGMKKKNLLTW 490

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
            ++ MAY  +G  S ++++   M+L  ++P    FV+++ +C++ G + KG   +  M  
Sbjct: 491 TSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQ 550

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
            +G+ P+ +  GC+VD+L R G LE A+ +I  M F+ S   +  LL+ C+ H +     
Sbjct: 551 DFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAA 609

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
            A+EK+  L PKN   +VLLS
Sbjct: 610 RAAEKIFQLEPKNATPYVLLS 630



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/624 (26%), Positives = 291/624 (46%), Gaps = 17/624 (2%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTND-----IFLQNNLIAMYSKCGYFGWGLRVF 102
           A  L+   +L++   G +VHG +++     D       L+N +I MY +CG     L VF
Sbjct: 14  AAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVF 73

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV-MKVCVSMGAS 161
           D M ++N+V+WT ++SA    G F   + ++  M  +G  P+     S+ +K        
Sbjct: 74  DRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNL 133

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           + G  +H   ++   E +  V   V+  Y K GDV  A  VF SI   +V  W  +I  Y
Sbjct: 134 DEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECS 280
           A  G+  E L ++S M   G+  D YTF   L  C+ V   +  + +H   I S  ++  
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            ++  ALI++Y K   ++ AF VF ++ +KD++SW+++   F+++        L     L
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G RPN+VTF  +L     L     G ++    +  G+ D+  +TS+L+ M+C  G VE 
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A S+F++   +++ +W+ +++GY  N   A  L  F  +   GV+ N  TF   ++ C  
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   Q+H  +   G      + ++L+  Y   G+L+ +     G ++ ++ +W ++
Sbjct: 434 VGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSI 493

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---K 577
             A    GH   ++ + H +   G KPD  +   IL SC   G  Q +K +H + +    
Sbjct: 494 AMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAG--QMSKGLHYYNLMTQD 551

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAM 636
            G    V     ++D   + G ++ A    +   F S+  + +  L+ A   H   + A 
Sbjct: 552 FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESS--LAWMMLLTACKAHNDTARAA 609

Query: 637 EIFDKMKLANLQPSQATFVSVMSA 660
              +  K+  L+P  AT   ++S+
Sbjct: 610 RAAE--KIFQLEPKNATPYVLLSS 631



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 145/317 (45%), Gaps = 5/317 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + +     L    +LK+   G ++H  IV+ G+++D+ L + L+ MY   G+     
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETAR 375

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+   ER++VSW+ +++   QN      L ++ +M+ +G  PN     S +  C  +G
Sbjct: 376 SIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVG 435

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  +H     + ++K+  V  +++N Y K G +  AE VF  +   ++  W ++  
Sbjct: 436 ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVE 278
            Y   G+G  +L ++  M  +G+  D   F+  L  C+       G   + L+ +   + 
Sbjct: 496 AYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIA 555

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK- 337
            ++     ++D+  ++  ++ A ++   M  +  ++W  L      + +  + A    K 
Sbjct: 556 PAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKI 615

Query: 338 FILSGSRPNHVTFSILL 354
           F L    P + T  +LL
Sbjct: 616 FQLE---PKNATPYVLL 629


>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 178/607 (29%), Positives = 300/607 (49%), Gaps = 47/607 (7%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           YAK   +  A ++F  +    V  WN MI  Y+  G   EAL +V SM    + + + TF
Sbjct: 42  YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTF 101

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY------------------ 291
            + L  C+ +     G+ IH L+++S  E    + +AL+  Y                  
Sbjct: 102 SSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVR 161

Query: 292 -------------IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP-GQTASLFHK 337
                        +  + MD A  VF +M  +DV++W TL  GFS+N +  G+   +F  
Sbjct: 162 RNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRL 221

Query: 338 FILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            + SG + PN  TF  ++R CG+L  L +G  +  L + CG   + ++  +L+  +C C 
Sbjct: 222 MMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECE 281

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A++ A  V   V    +   N L+ G          L +   I ++ +  NG T    V 
Sbjct: 282 AIDDALRVCKGVVNPCLNALNSLIEG----------LISMGRIEDAELVFNGMTEMNPVS 331

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSS--LIKSYVNFGQLDNSFE-FSNGAERLD 513
                +   + GQ+  +        C  I SS  +I  Y   G++D + E F       D
Sbjct: 332 YNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKD 391

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
             +W +M+S  +H G   EA+ ++ ++     +  +     + ++C+ +G+  + + +H 
Sbjct: 392 PVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHA 451

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            +IK  F + VYV +++ID Y+KCG I  A+ +F   F+ N V  +  LI  +A+HGL S
Sbjct: 452 HLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPN-VAAWTALINGHAYHGLGS 510

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           EA+ +FD+M    L P+ ATFV V+SACS  GLV++G  +F SM+  Y + P+ + Y C+
Sbjct: 511 EAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACV 570

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+L R+G++ +A+  I+ MP +    V+ +LLS C    + E+GE  +EK+    PK  
Sbjct: 571 VDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPI 630

Query: 754 AAHVLLS 760
           +++V+LS
Sbjct: 631 SSYVILS 637



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/590 (22%), Positives = 255/590 (43%), Gaps = 55/590 (9%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
           ++I   N  I+ Y+K        ++FD+M +R +VSW  ++S+  ++G F   L +   M
Sbjct: 30  SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
             +    +E    SV+ VC  +     G  IHC  LK   E    VG ++L FYA   ++
Sbjct: 90  HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 149

Query: 197 AAAER-------------------------------VFYSISSDDVGCWNAMIGGYAHCG 225
             A R                               VF  +   DV  W  +I G++  G
Sbjct: 150 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 209

Query: 226 YGF-EALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G  +AL +   M+  G  T +++TF   ++ C  +    +GR +HGL+++  +E   SI
Sbjct: 210 DGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 269

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
             AL++ Y +   +D A +V + + +  + + N+L  G            +F+      +
Sbjct: 270 GGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGM----T 325

Query: 344 RPNHVTFSILLR--QCGKLLDLDLGL--QLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             N V+++++++    G  +D    L  ++ C  +          ++++I ++ R G ++
Sbjct: 326 EMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFS--------SNTMISVYSRNGEID 377

Query: 400 MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  +F+   + K+  TWN ++SGY  +    + LK +  +    ++    TF  +   C
Sbjct: 378 KALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHAC 437

Query: 459 -CRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C     Q  GQ +H  +IKT F S  Y+ +SLI  Y   G +  +          ++A+
Sbjct: 438 SCLGSLHQ--GQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAA 495

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFV 575
           W A+++   + G   EA+++F  ++E G  P+      +L++C+  G      K  H   
Sbjct: 496 WTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSME 555

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
                   +   + V+D   + G I+ A     +     D +V+  L+ A
Sbjct: 556 RCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSA 605



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 156/388 (40%), Gaps = 40/388 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  VHG ++K G   D  +   L+  Y +C      LRV   +    L +   ++   I
Sbjct: 250 VGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLI 309

Query: 122 QNGEFDMGLKMYVDMK-----TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
             G  +    ++  M      +   M   +AVG  M                    K   
Sbjct: 310 SMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDS-----------------KRLF 352

Query: 177 EKNP----FVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEAL 231
           EK P    F   ++++ Y++ G++  A  +F    ++ D   WN+MI GY H G   EAL
Sbjct: 353 EKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEAL 412

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +  +M    I   + TF      CS +     G+ +H  +I++  E ++ +  +LIDMY
Sbjct: 413 KLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMY 472

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A   F  +   +V +W  L  G + +    +  SLF + I  G  PN  TF 
Sbjct: 473 SKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFV 532

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVF 405
            +L  C +   ++ G+++      C      +VT +L +  C      R G +  A    
Sbjct: 533 GVLSACSRAGLVNEGMKIFHSMERC-----YSVTPTLEHYACVVDLLGRSGHIREAEEFI 587

Query: 406 DNVSYK-NITTWNELLSGYCFNCCDADV 432
             +  + +   W  LLS  C+   D +V
Sbjct: 588 KKMPLEADGVVWGALLSA-CWFWMDLEV 614



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/441 (19%), Positives = 175/441 (39%), Gaps = 80/441 (18%)

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           + +    H   L E   T+  I  + +   +++A  +FD +  + + +WN ++S Y  + 
Sbjct: 18  EFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHG 77

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------- 478
             ++ L    ++  S ++++  TF  V+  C R    +    IH  ++K+G         
Sbjct: 78  RFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGS 137

Query: 479 -----FSSCGYI-----------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                ++SC  I                  S ++  YV    +D++        R D+ +
Sbjct: 138 ALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVA 197

Query: 517 WGAMMSALVHQGHN-HEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           W  ++S     G    +A+ IF  ++ +GE  P+E+    ++ +C  +G     +++H  
Sbjct: 198 WTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGL 257

Query: 575 VIKLGFNTEVYVASAVIDAYAKC-------------------------------GDIKGA 603
           ++K G   +  +  A+++ Y +C                               G I+ A
Sbjct: 258 LMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDA 317

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS--VMSAC 661
            + F+     N V  YN +I  YA  G + ++  +F+KM      P +  F S  ++S  
Sbjct: 318 ELVFNGMTEMNPV-SYNLMIKGYAVGGQMDDSKRLFEKM------PCRTIFSSNTMISVY 370

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM---PFQPS 718
           S  G +DK   LF+   +    +  P  +  ++     +G  E+A  +   M     Q +
Sbjct: 371 SRNGEIDKALELFEETKN----EKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQT 426

Query: 719 PTVYRSLLSGCRIHGNKELGE 739
            + + +L   C   G+   G+
Sbjct: 427 QSTFSALFHACSCLGSLHQGQ 447



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 5/130 (3%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +QR K    +       +E+   +  I  YAK   +  AR  FDQ      V+ +NT+I 
Sbjct: 13  HQRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQ-MPQRTVVSWNTMIS 71

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQ 680
           +Y+ HG  SEA+ +   M  ++++ S++TF SV+S C+    +  G    CL+ KS    
Sbjct: 72  SYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSES 131

Query: 681 YGMQPSPDCY 690
           + +  S   Y
Sbjct: 132 FELVGSALLY 141


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 295/612 (48%), Gaps = 72/612 (11%)

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           GSV+++C  + +   G  +H       +  +  +G  +++FYA  GD+    RVF ++  
Sbjct: 103 GSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEK 162

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            +V  WN M+  YA  G                                   DF      
Sbjct: 163 KNVYLWNFMVSEYAKIG-----------------------------------DF------ 181

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
                    + SI +   +++  I+    + AF++F+++ D+DVISWN++  G+  N   
Sbjct: 182 ---------KESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            +   ++ + +  G   +  T   +L  C     L LG  +  LA+   F    N +++L
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ +CG ++ A  VF+ +  +N+ +W  +++GY  +      +K    + + GV+++ 
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDV 352

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
                ++  C RS +      +H  I      S  ++C++L+  Y   G ++ +    + 
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFST 412

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D+ SW  M+  L                     KPD   +  +L +CA++ A +R 
Sbjct: 413 MVVKDIISWNTMIGEL---------------------KPDSRTMACVLPACASLSALERG 451

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           K IH ++++ G++++ +VA+A++D Y KCG +  AR+ FD    S D++ +  +I  Y  
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMIAGYGM 510

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG  +EA+  F++M+ A ++P + +F+S++ ACSH GL+++G   F  M + + ++P  +
Sbjct: 511 HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C+VD+LSR G L  A   +E +P  P  T++ +LL GCR + + EL E  +E++  L
Sbjct: 571 HYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFEL 630

Query: 749 LPKNDAAHVLLS 760
            P+N   +VLL+
Sbjct: 631 EPENTGYYVLLA 642



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/540 (24%), Positives = 237/540 (43%), Gaps = 75/540 (13%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGL--------------------RVFDEMAERNLVSWTLIV 117
           +++L N +++ Y+K G F   +                     +FD++ +R+++SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + NG  + GL +Y  M   G   +   + SV+  C + G    G ++H  A+K   E
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +      ++L+ Y+K GD+  A RVF  +   +V  W +MI GY   G    A+ ++  M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG+ +D     + L  C+     D G+ +H  I  + +E ++ + NAL+DMY K   M
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  VF  M  KD+ISWNT+ G                       +P+  T + +L  C
Sbjct: 404 EAANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACVLPAC 442

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L+ G ++    L  G+  + +V ++L+ ++ +CG + +A  +FD +  K++ +W 
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++GY  +    + + TF  + ++G+E +  +F  ++  C            H  +++ 
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQ 551

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+                F  + N F      E      +  M+  L   G+  +A    
Sbjct: 552 GWRF--------------FYIMKNDFNIEPKLEH-----YACMVDLLSRTGNLSKAYEFM 592

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAK 596
            +L  A   PD  I G +L  C      +  + +   V +L   NT  YV  A I A A+
Sbjct: 593 ETLPIA---PDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 201/442 (45%), Gaps = 34/442 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VH   +K  F   I   N L+ MYSKCG     LRVF++M ERN+VSWT +++   
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++G  D  +K+   M+  G   +  A+ S++  C   G+ + G  +H +     +E N F
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G + AA  VF ++   D+  WN MIG                      
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------------E 427

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T    L  C+ ++  + G++IHG I+R+       + NAL+D+Y+K   +  A 
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ +  KD++SW  +  G+  +    +  + F++   +G  P+ V+F  +L  C    
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 362 DLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNE 418
            L+ G +   + +   F  E  +   + ++ +  R G +  A+   + +    + T W  
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGA 606

Query: 419 LLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           LL G C N  D ++ +     ++E   E  G  +  +      +E  + V ++   I K 
Sbjct: 607 LLCG-CRNYHDIELAEKVAERVFELEPENTG-YYVLLANIYAEAEKWEEVKRLREKIGKQ 664

Query: 478 GFSS---CGYICSSLIKSYVNF 496
           G      C +I    IK  VN 
Sbjct: 665 GLRKNPGCSWI---EIKGKVNL 683



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   +A  L    +L +   G ++HG+I++ G+++D  + N L+ +Y KCG  G   
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++LVSWT++++    +G  +  +  + +M+  G  P+E +  S++  C   G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA-------KLGDVAAAERVFYSIS-SDDV 211
             E G+          I KN F     L  YA       + G+++ A     ++  + D 
Sbjct: 548 LLEQGWRF------FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDA 601

Query: 212 GCWNAMIGG 220
             W A++ G
Sbjct: 602 TIWGALLCG 610


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 306/640 (47%), Gaps = 65/640 (10%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITM 244
           +LN Y KLG ++ A  +F  + + DV  WN ++ GY        +L    SM   G  + 
Sbjct: 77  MLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSP 136

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM-------------- 290
           + +TF  A++ C  + +  +  Q+ G++ +   +    +  AL+DM              
Sbjct: 137 NAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLF 196

Query: 291 -----------------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
                            Y+K+ G+D+A ++F+ M ++DV+SWN +    S++    +   
Sbjct: 197 VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +       G R +  T++  L  C +L  L  G QL    +      +  V S+L+ ++ 
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYA 316

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG  + A  VF+++  +N   W  L++G+  + C  + ++ F  +    + ++      
Sbjct: 317 KCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALAT 376

Query: 454 VVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYICS------------ 487
           ++  CC   +  +  Q+H   +K+G              ++ C  + S            
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKD 436

Query: 488 -----SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV- 541
                S+I ++   G +  + EF +G    ++ +W AM+ A +  G   + + +++ ++ 
Sbjct: 437 IVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLS 496

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E   +PD     T+   CA +GA +    I    +K+G   +  VA+AVI  Y+KCG I 
Sbjct: 497 EKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRIL 556

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD   N  D++ +N +I  Y+ HG+  +A+EIFD +     +P   ++V+V+S C
Sbjct: 557 EARKVFD-FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGC 615

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLV +G   F  M   + + P  + + C+VD+L R G+L +AK +I+ MP +P+  V
Sbjct: 616 SHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEV 675

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           + +LLS C+IHGN EL E A++ +  L   +  +++L++K
Sbjct: 676 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 157/718 (21%), Positives = 292/718 (40%), Gaps = 99/718 (13%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCG---------------------------YFGWG- 98
           HG +V +G  + +FLQN L+  Y  CG                           Y   G 
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86

Query: 99  ----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMK 153
               + +F  M  R++ SW  ++S   Q+ ++   L+ +V M  +G   PN F     MK
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--------- 204
            C ++G       +     K   + +  V  ++++ + + G V  A R+F          
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206

Query: 205 ----------------------SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
                                 S+   DV  WN M+   +  G   EAL++V  M  +G+
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T+ ++L  C+ ++    G+Q+H  +IR+       + +AL+++Y K      A  
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKG 326

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  + D++ ++W  L  GF ++    ++  LF++        +    + L+  C   +D
Sbjct: 327 VFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV------------------ 404
           L LG QL  L L  G +    V++SLI M+ +C  ++ A S+                  
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446

Query: 405 -------------FDNVSYKNITTWNELLSGYCFNCCDADVLKTF-CNIWESGVEVNGCT 450
                        FD +S KN+ TWN +L  Y  +  + D L+ +   + E  V  +  T
Sbjct: 447 HSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVT 506

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  + + C      ++  QI G  +K G      + +++I  Y   G++  + +  +   
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW AM++     G   +A+ IF  +++ G KPD      +L+ C+  G  Q  KS
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS 626

Query: 571 IHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
               + ++   +  +   S ++D   + G +  A+   D+        V+  L+ A   H
Sbjct: 627 YFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIH 686

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           G  +E  E+  K       P   +++ +    +  G  D    + K M  + G++ +P
Sbjct: 687 G-NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK-GIKKNP 742



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 190/433 (43%), Gaps = 66/433 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + L+ +Y+KCG F    
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAK 325

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +RN V+WT++++  +Q+G F   ++++  M+      ++FA+ +++  C S  
Sbjct: 326 GVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 385

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK--------------------------- 192
               G  +H   LK    +   V  S+++ YAK                           
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMIT 445

Query: 193 ----LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
               +G++A A   F  +S+ +V  WNAM+G Y   G   + L + + ML E  +  D  
Sbjct: 446 AHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWV 505

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  ++  +    S+ NA+I MY K   +  A KVF+ +
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFL 565

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             KD++SWN +  G+S++    Q   +F   +  G++P+++++  +L  C          
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS--------- 616

Query: 368 QLQCLALHCGFLDE-----------ENVTSSLIYMFC------RCGAVEMAHSVFDNVSY 410
                  H G + E            N++  L +  C      R G +  A  + D +  
Sbjct: 617 -------HSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPM 669

Query: 411 KNIT-TWNELLSG 422
           K     W  LLS 
Sbjct: 670 KPTAEVWGALLSA 682



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 65/135 (48%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N   S+  +R D +          +L +  LG Q+ G  VK+G   D  + N +I MYSK
Sbjct: 492 NVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSK 551

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG      +VFD +  +++VSW  +++   Q+G     ++++ D+   G  P+  +  +V
Sbjct: 552 CGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAV 611

Query: 152 MKVCVSMGASEFGYS 166
           +  C   G  + G S
Sbjct: 612 LSGCSHSGLVQEGKS 626



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 34/205 (16%)

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L SC A GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR          +
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPN 70

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMK--------------------LANLQ------- 648
           VI +N ++  Y   G +S+A+E+F +M                     LA+L+       
Sbjct: 71  VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130

Query: 649 -----PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
                P+  TF   M +C   G       L   M  ++G Q   D    LVDM  R G +
Sbjct: 131 SGDSSPNAFTFAYAMKSCGALGERSLALQLL-GMVQKFGSQDDSDVAAALVDMFVRCGTV 189

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSG 728
           + A  +  +   +P+     S+L G
Sbjct: 190 DLASRLF-VRIKEPTIFCRNSMLVG 213


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 183/663 (27%), Positives = 307/663 (46%), Gaps = 66/663 (9%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGC--WNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           +++ Y  LG ++ A  +       D G   WN++I  Y + G   + L+    M     T
Sbjct: 65  LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D YTF    + C  ++    G   H L   +    ++ + NAL+ MY +   +  A KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLD 362
           F+ M   DV+SWN++   +++   P     +F K     G RP+ +T   +L  C  +  
Sbjct: 185 FDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGT 244

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
             LG Q    A+    +    V + L+ M+ + G ++ A++VF N+  K++ +WN +++G
Sbjct: 245 RSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAG 304

Query: 423 YCFNCCDADVLKTFCNIWE-----------------------------------SGVEVN 447
           Y       D ++ F  + E                                   SG++ N
Sbjct: 305 YSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIK-------TGFSSCGYICSSLIKSYVNFGQLD 500
             T   V+  C          +IH   IK        G      + + LI  Y    ++D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVD 424

Query: 501 NS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG--EKPDEYILGTI 555
            +   F+  +  ER D+ +W  M+      G  ++A+ +   + E     +P+ + +   
Sbjct: 425 IARAMFDSLSPKER-DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +CA++ A    K IH + ++   N   ++V++ +ID YAKCGDI  AR+ FD     N
Sbjct: 484 LVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKN 543

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           +V  + +L+  Y  HG   EA+ IF++M+    +    T + V+ ACSH G++D+G   F
Sbjct: 544 EV-TWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             M + +G+ P P+ Y CLVD+L R G L  A  +IE MP +P P V+ +LLS CRIHG 
Sbjct: 603 NRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGK 662

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEGV-----CNVND 781
            ELGE+A++K+  L   ND ++ LLS         +   R  +L+ H+G+     C+  +
Sbjct: 663 VELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVE 722

Query: 782 GIK 784
           GIK
Sbjct: 723 GIK 725



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 168/708 (23%), Positives = 291/708 (41%), Gaps = 67/708 (9%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S S L   P F+ K  ++S+          +H  ++  G    + L ++LI+ Y   G  
Sbjct: 24  STSALEITPPFIHKCKTISQV-------KLIHQKLLSFGILT-LNLTSHLISTYISLGCL 75

Query: 96  GWG---LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
                 LR F   ++  +  W  ++ +   NG  +  L  +  M +  + P+ +    V 
Sbjct: 76  SHAVSLLRRFPP-SDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVF 134

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
           K C  + +   G S H  +       N FVG +++  Y++ G ++ A +VF  +   DV 
Sbjct: 135 KACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVV 194

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            WN++I  YA  G    AL + S M  E G   D  T +N L  C+ V    +G+Q HG 
Sbjct: 195 SWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGF 254

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            + SE+  ++ + N L+DMY K   MD A  VF  M  KDV+SWN +  G+S+       
Sbjct: 255 AVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDA 314

Query: 332 ASLF-----------------------------------HKFILSGSRPNHVTFSILLRQ 356
             LF                                    + + SG +PN VT   +L  
Sbjct: 315 VRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSG 374

Query: 357 CGKLLDLDLGLQLQCLALHC-------GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           C  +  L  G ++ C A+         G  DE  V + LI M+ +C  V++A ++FD++S
Sbjct: 375 CASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLS 434

Query: 410 YK--NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQ 465
            K  ++ TW  ++ GY  +      L+    ++E   +   N  T    +  C       
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALS 494

Query: 466 MVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSA 523
           +  QIH   ++   ++   ++ + LI  Y   G + D    F N  E+ +  +W ++M+ 
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEK-NEVTWTSLMTG 553

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY-QRTKSIHPFVIKLGFNT 582
               G+  EA+ IF  +   G K D   L  +L +C+  G   Q  +  +      G + 
Sbjct: 554 YGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSP 613

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
                + ++D   + G +  A    ++       +V+  L+     HG V        K+
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKI 673

Query: 643 -KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            +LA+      T +S M A + +    K     +S+    G++  P C
Sbjct: 674 TELASNNDGSYTLLSNMYANAGRW---KDVTRIRSLMRHKGIKKRPGC 718


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 274/548 (50%), Gaps = 10/548 (1%)

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N+++  Y   G   EAL V S+M       D  TF  A + C+ +     GR +H   + 
Sbjct: 81  NSLLRSYTGLGCHREALAVYSAMR----AFDHLTFPFAAKACAGLRLGRHGRAVHCRALA 136

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           +       + NALI MY+    +  A  VF  M ++ V+SWN +  G  +N    +   +
Sbjct: 137 AGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEV 196

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F +    G   +  T   +L  C +  DL+ G  +  L    G  D   V ++LI M+ +
Sbjct: 197 FGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGK 256

Query: 395 CGAVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE-VNGCTFF 452
           C ++E A  VFD+  + K++ +W  ++  Y  N    + +   C +  SG    NG T  
Sbjct: 257 CRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMV 316

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD-NSFEFSNGAER 511
           Y++  C    + +     H   I+ G  S   + ++LI +Y   G++         G+ R
Sbjct: 317 YLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR 376

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            +  +W A +S     G   +A+ +F  ++    +PD   + +IL + A     +  K+I
Sbjct: 377 AE--TWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNI 434

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H F++ LGF     +A+ +ID Y+K GD+  A   F Q     DV+ + T+I  Y  HG 
Sbjct: 435 HCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALF-QWLPEKDVVAWTTIIAGYGIHGH 493

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
              A+ ++D+M  +  +P+  T  +++ ACSH G++D+G  +FK M + +G+ P+ + Y 
Sbjct: 494 ARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS 553

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           CLVDML R G +E+A  +I+ MPF+PS +V+ +LL  C +H N E GE A+++L  L P+
Sbjct: 554 CLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAKRLFQLDPE 613

Query: 752 NDAAHVLL 759
           N  ++VLL
Sbjct: 614 NTGSYVLL 621



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 152/593 (25%), Positives = 267/593 (45%), Gaps = 31/593 (5%)

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT-LIVSAAIQNGEF 126
           GH+++    + +F+      +Y  CG       +  +M +   VS++  ++ +    G  
Sbjct: 40  GHLLRYHGLHPLFM------VYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCH 93

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
              L +Y  M+    +   FA     K C  +     G ++HC AL      + +V  ++
Sbjct: 94  REALAVYSAMRAFDHLTFPFAA----KACAGLRLGRHGRAVHCRALAAGFGGDTYVQNAL 149

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           ++ Y   GDV AAE VF ++ +  V  WNA+I G    GY   AL V   M  +G+ +D+
Sbjct: 150 ISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDR 209

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            T ++ L  C+   D + GR +H L+    +   +++ NALIDMY K   ++ A +VF+ 
Sbjct: 210 ATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH 269

Query: 307 MA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKLLDLD 364
              DKDV+SW  + G +  N    +  SL  + ++SG+  PN VT   LL  C  +    
Sbjct: 270 CKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGK 329

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
                  L +  G   +  V ++LI  + RCG +++     +  S++   TWN  LSGY 
Sbjct: 330 HAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYT 388

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +  +   ++ F  +    V  +  T   ++     S + +    IH  ++  GF     
Sbjct: 389 VSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTE 448

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I + LI  Y   G LD ++         D+ +W  +++     GH   A+ ++  +VE+G
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESG 508

Query: 545 EKPDEYILGTILNSCA-------AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
            KP+   + T+L +C+        I  ++  +++H  +     N E Y  S ++D   + 
Sbjct: 509 GKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMP----NGEHY--SCLVDMLGRA 562

Query: 598 GDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           G I+ A R+  D  F  +   V+  L+ A   H  V E  E+  K +L  L P
Sbjct: 563 GRIEEAHRLIQDMPFEPS-TSVWGALLGACVLHKNV-EFGEVAAK-RLFQLDP 612



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 3/398 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   +  GF  D ++QN LI+MY  CG  G    VF  M  R +VSW  +++  ++
Sbjct: 127 GRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVK 186

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  +  L+++ +M  +G   +   V SV+  C        G ++H       +     V
Sbjct: 187 NGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAV 246

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
             ++++ Y K   +  A RVF     D DV  W AMIG Y      FEA+++   ML  G
Sbjct: 247 KNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSG 306

Query: 242 ITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               +  T +  L  C+ +      +  H L IR  ++  I++  ALID Y +   M   
Sbjct: 307 AAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLM 366

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
               ER + +   +WN    G++ +    +   LF + I    RP+  T + +L    + 
Sbjct: 367 RLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAES 425

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            DL  G  + C  L  GFL    + + LI ++ + G ++ A ++F  +  K++  W  ++
Sbjct: 426 ADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTII 485

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +GY  +      +  +  + ESG + N  T   ++  C
Sbjct: 486 AGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYAC 523



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 120/277 (43%), Gaps = 6/277 (2%)

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTW-NELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           L  ++C CG    AH++   +      ++ N LL  Y    C  + L  +  +       
Sbjct: 51  LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAM----RAF 106

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  TF +  + C      +    +H   +  GF    Y+ ++LI  Y++ G +  +    
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                  + SW A+++  V  G+   A+ +F  +   G   D   + ++L +CA      
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             +++H  V   G    V V +A+ID Y KC  ++ AR  FD   +  DV+ +  +I AY
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAY 286

Query: 627 AHHGLVSEAMEIFDKMKLANLQ-PSQATFVSVMSACS 662
             +    EA+ +  +M ++    P+  T V ++SAC+
Sbjct: 287 VLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACA 323



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 55/128 (42%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +A  L           G  +H  ++ LGF     +   LI +YSK G      
Sbjct: 408 VRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAW 467

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  + E+++V+WT I++    +G     + +Y  M  +G  PN   + +++  C   G
Sbjct: 468 ALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAG 527

Query: 160 ASEFGYSI 167
             + G  +
Sbjct: 528 MIDEGIKV 535


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 165/579 (28%), Positives = 291/579 (50%), Gaps = 19/579 (3%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           GD  AA   F ++   ++  W  ++  +A  G   E L  +  M  +G+  D  TFI AL
Sbjct: 9   GDAKAA---FDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 65

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDV 312
             C        G +IH +++ S +E    + NAL++MY K   + +A +VF +M   ++V
Sbjct: 66  GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 125

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ-C 371
           ISW+ + G  + + N  +    F   +L G +        +L  C     +  G  +  C
Sbjct: 126 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSC 185

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD--NVSYKNITTWNELLSGYCFNCCD 429
           +AL  GF  E  V ++++ M+ RCGAVE A  VFD  + + +++ +WN +LS Y  N   
Sbjct: 186 IAL-SGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRG 244

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
            D ++ +  +    +  +  T+  ++  C  +E+  +   +H  I+         + ++L
Sbjct: 245 KDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNAL 301

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE---- 545
           +  Y   G    +    +  E+  + SW  ++SA V +    EA  +F  ++E  +    
Sbjct: 302 VSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSS 361

Query: 546 ---KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KPD     TILN+CA + A ++ K +       G +++  V +AV++ Y KCG+I+ 
Sbjct: 362 QRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEE 421

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD   +  DV ++N +I  YA  G   EA+++F +M++  ++P   +FVS++ ACS
Sbjct: 422 ARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACS 481

Query: 663 HKGLVDKGCLLFKSMDSQY-GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           H GL D+G   F SM ++Y  +  +   +GC+ D+L R G L++A+  +E +P +P    
Sbjct: 482 HTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVA 541

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + SLL+ CR H + +  +  + KLL L P+    +V LS
Sbjct: 542 WTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALS 580



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 258/579 (44%), Gaps = 18/579 (3%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+ C   G     FD + +RNL SWT +V+A   +G+    L+    M+ +G  P+   
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
             + +  C    +   G  IH   +  R+E +P V  ++LN Y K G ++ A+RVF  + 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 208 -SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
            + +V  W+ M G +A  G  +EAL     ML  GI   K   +  L  CS  A    GR
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSE 324
            IH  I  S  E  + + NA++ MY +   ++ A KVF+ M  A +DV+SWN +   +  
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N        L+ +  L   RP+ VT+  LL  C    D+ LG  L    ++        V
Sbjct: 241 NDRGKDAIQLYQRMQL---RPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE--- 441
            ++L+ M+ +CG+   A +VFD +  ++I +W  ++S Y      A+    F  + E   
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357

Query: 442 ----SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
                 V+ +   F  ++  C      +    +       G SS   + ++++  Y   G
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCG 417

Query: 498 QLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +++ +   F     R D+  W AM++     G +HEA+ +F  +   G +PD +   +IL
Sbjct: 418 EIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 477

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSN 614
            +C+  G   + KS    +     N    +     V D   + G +K A    ++     
Sbjct: 478 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 537

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           D + + +L+ A  +H  +  A E+ +  KL  L+P  AT
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVAN--KLLRLEPRCAT 574



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 201/431 (46%), Gaps = 16/431 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +    +L    + +S   G ++H  +V      D  + N L+ MY KCG      
Sbjct: 54  VRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAK 113

Query: 100 RVFDEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           RVF +M   RN++SW+++  A   +G     L+ +  M   G    + A+ +++  C S 
Sbjct: 114 RVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 173

Query: 159 GASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWN 215
              + G  IH C AL    E    V  +V+  Y + G V  A +VF ++     DV  WN
Sbjct: 174 ALVQDGRMIHSCIALS-GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWN 232

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            M+  Y H   G +A+ +   M       DK T+++ L  CS   D  +GR +H  I+  
Sbjct: 233 IMLSTYVHNDRGKDAIQLYQRMQLRP---DKVTYVSLLSACSSAEDVGLGRVLHKQIVND 289

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           E+E ++ + NAL+ MY K      A  VF++M  + +ISW T+   +   +   +   LF
Sbjct: 290 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 349

Query: 336 HKFI---LSGS----RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
            + +    +GS    +P+ + F  +L  C  +  L+ G  +   A  CG   ++ V +++
Sbjct: 350 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 409

Query: 389 IYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           + ++ +CG +E A  +FD V S  ++  WN +++ Y       + LK F  +   GV  +
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 469

Query: 448 GCTFFYVVETC 458
             +F  ++  C
Sbjct: 470 SFSFVSILLAC 480



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 11/311 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D +     LS   + +   LG  +H  IV      ++ + N L++MY+KCG      
Sbjct: 256 LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEAR 315

Query: 100 RVFDEMAERNLVSWTLIVSAAIQN---GEFDMGLKMYVDMKTNG----FMPNEFAVGSVM 152
            VFD+M +R+++SWT I+SA ++     E     +  ++++ NG      P+  A  +++
Sbjct: 316 AVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTIL 375

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDV 211
             C  + A E G  +   A    +  +  VG +V+N Y K G++  A R+F ++ S  DV
Sbjct: 376 NACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDV 435

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI  YA  G   EAL +   M  EG+  D ++F++ L  CS     D G+     
Sbjct: 436 QLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTS 495

Query: 272 IIRS--EVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNP 328
           +      V  +I     + D+  +   +  A +  E++  K D ++W +L      +++ 
Sbjct: 496 MTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDL 555

Query: 329 GQTASLFHKFI 339
            +   + +K +
Sbjct: 556 KRAKEVANKLL 566



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 169/394 (42%), Gaps = 27/394 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIVSAA 120
           G  +H  I   GF +++ + N ++ MY +CG      +VFD M E  R++VSW +++S  
Sbjct: 179 GRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTY 238

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + N      +++Y  M+     P++    S++  C S      G  +H   +   +EKN 
Sbjct: 239 VHNDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNV 295

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-- 238
            VG ++++ YAK G    A  VF  +    +  W  +I  Y       EA ++   ML  
Sbjct: 296 IVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLEL 355

Query: 239 -----FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
                 + +  D   F+  L  C+ V+  + G+ +        +    ++  A++++Y K
Sbjct: 356 EKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGK 415

Query: 294 SSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
              ++ A ++F+ +  + DV  WN +   +++     +   LF +  + G RP+  +F  
Sbjct: 416 CGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVS 475

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFC------RCGAVEMAHSVF 405
           +L  C        GL+ Q  +       E  NVT ++ +  C      R G ++ A    
Sbjct: 476 ILLACSH-----TGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFL 530

Query: 406 DNVSYK-NITTWNELLSGYCFNCCDADVLKTFCN 438
           + +  K +   W  LL+  C N  D    K   N
Sbjct: 531 EKLPVKPDAVAWTSLLAA-CRNHRDLKRAKEVAN 563



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 1/132 (0%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S   ++ D +     L+   ++ +   G  V       G ++D  +   ++ +Y KCG  
Sbjct: 360 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEI 419

Query: 96  GWGLRVFDEMAERNLVS-WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
               R+FD +  R  V  W  +++   Q G+    LK++  M+  G  P+ F+  S++  
Sbjct: 420 EEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLA 479

Query: 155 CVSMGASEFGYS 166
           C   G  + G S
Sbjct: 480 CSHTGLEDQGKS 491


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 282/520 (54%), Gaps = 14/520 (2%)

Query: 247 YTFINALQGCSLVADFDIGRQIHG--LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +T+    Q C+  +    G+ +H    +     + ++ + N +++MY K   +DYA ++F
Sbjct: 64  HTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMF 123

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M +K+++SW  L  G++++    +   +F + +L   +P    F+ ++  CG   D +
Sbjct: 124 DEMPEKNIVSWTALVSGYAQHGRSNECFRVF-RGMLIWHQPTEFAFASVISACGG--DDN 180

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCR-CGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            G Q+  LAL   F     V ++LI M+C+ CG  + A +V++ + ++N+ +WN +++G+
Sbjct: 181 CGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGF 240

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC-RSENQQMVGQIHGAIIKTGFSSC 482
               C    L+ F  +   G+  +  T   +    C   +  +   Q+    IKTGF   
Sbjct: 241 QVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILK 300

Query: 483 GYICSSLIKSYVNFG-QLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
             + ++L+K+Y + G ++ + +  F     R D+ SW  +++A   +    +A+ IF   
Sbjct: 301 IEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERDPK-KALVIFRQF 359

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +     PD ++   +L +CA +   +   ++   V+K+GF  ++ +A+A+I A A+CG +
Sbjct: 360 LRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSV 419

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             ++  FD+   S D + +N+++ AYA HG   EA+ +F +M   + QP  ATFV+++SA
Sbjct: 420 ALSKQVFDK-MGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSA 475

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH G+ ++G  +F++M + +G+ P  D Y C+VD+L R G + +AK +I+ MP +P   
Sbjct: 476 CSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSV 535

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+ +LL  CR HG  +L + A+ KL  L P N   +VL+S
Sbjct: 536 VWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVLMS 575



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 197/402 (49%), Gaps = 13/402 (3%)

Query: 63  GTQVHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  +H H+      +D  +FL N+++ MY+KCG   +  ++FDEM E+N+VSWT +VS  
Sbjct: 82  GQALHRHMFLHNPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGY 141

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q+G  +   +++  M      P EFA  SV+  C   G    G  +H  ALK   +   
Sbjct: 142 AQHGRSNECFRVFRGMLI-WHQPTEFAFASVISAC--GGDDNCGRQVHALALKTSFDSCV 198

Query: 181 FVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           +VG +++  Y K  G    A  V+ ++   ++  WN+MI G+  CG G  AL + S M  
Sbjct: 199 YVGNALIMMYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHV 258

Query: 240 EGITMDKYTFINALQG-CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG-M 297
            GI  D+ T ++     C +    +   Q+  L I++     I +  AL+  Y    G +
Sbjct: 259 GGIRFDRATLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEV 318

Query: 298 DYAFKVF-ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
              +++F E    +DV+SW  +   F+E ++P +   +F +F+     P+   FSI+L+ 
Sbjct: 319 SDCYRIFLELDGRQDVVSWTGIIAAFAE-RDPKKALVIFRQFLRECLAPDRHMFSIVLKA 377

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L      L +Q   L  GF D+  + ++LI+   RCG+V ++  VFD +  ++  +W
Sbjct: 378 CAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSW 437

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           N +L  Y  +    + L  F  +     + +G TF  ++  C
Sbjct: 438 NSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSAC 476


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 294/611 (48%), Gaps = 72/611 (11%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+++C  + +   G  +H       +  +  +G  +++FYA  GD+    RVF ++   
Sbjct: 104 SVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKK 163

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +V  WN M+  YA  G                                   DF       
Sbjct: 164 NVYLWNFMVSEYAKIG-----------------------------------DF------- 181

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
                   + SI +   +++  I+    + AF++F+++ D+DVISWN++  G+  N    
Sbjct: 182 --------KESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTE 233

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   ++ + +  G   +  T   +L  C     L LG  +  LA+   F    N +++L+
Sbjct: 234 RGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLL 293

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG ++ A  VF+ +  +N+ +W  +++GY  +      +K    + + GV+++  
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVV 353

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
               ++  C RS +      +H  I      S  ++C++L+  Y   G ++ +    +  
Sbjct: 354 AITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTM 413

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  M+  L                     KPD   +  +L +CA++ A +R K
Sbjct: 414 VVKDIISWNTMIGEL---------------------KPDSRTMACVLPACASLSALERGK 452

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH ++++ G++++ +VA+A++D Y KCG +  AR+ FD    S D++ +  +I  Y  H
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMIAGYGMH 511

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G  +EA+  F++M+ A ++P + +F+S++ ACSH GL+++G   F  M + + ++P  + 
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEH 571

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+LSR G L  A   IE +P  P  T++ +LL GCR + + EL E  +E++  L 
Sbjct: 572 YACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELE 631

Query: 750 PKNDAAHVLLS 760
           P+N   +VLL+
Sbjct: 632 PENSGYYVLLA 642



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 194/404 (48%), Gaps = 41/404 (10%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGL--------------------RVFDEMAERNLVSWTLIV 117
           +++L N +++ Y+K G F   +                     +FD++ +R+++SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMI 223

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + NG  + GL +Y  M   G   +   + SV+  C + G    G ++H  A+K   E
Sbjct: 224 SGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE 283

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +      ++L+ Y+K GD+  A RVF  +   +V  W +MI GY   G    A+ ++  M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG+ +D     + L  C+     D G+ +H  I  + +E ++ + NAL+DMY K   M
Sbjct: 344 EKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSM 403

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  VF  M  KD+ISWNT+ G                       +P+  T + +L  C
Sbjct: 404 EAANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACVLPAC 442

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L+ G ++    L  G+  + +V ++L+ ++ +CG + +A  +FD +  K++ +W 
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            +++GY  +    + + TF  + ++G+E +  +F  ++  C  S
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 202/442 (45%), Gaps = 34/442 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG  VH   +K  F   I   N L+ MYSKCG     LRVF++M ERN+VSWT +++   
Sbjct: 269 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 328

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++G  D  +K+   M+  G   +  A+ S++  C   G+ + G  +H +     +E N F
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLF 388

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G + AA  VF ++   D+  WN MIG                      
Sbjct: 389 VCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG---------------------E 427

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D  T    L  C+ ++  + G++IHG I+R+       + NAL+D+Y+K   +  A 
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+ +  KD++SW  +  G+  +    +  + F++   +G  P+ V+F  +L  C    
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 362 DLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNE 418
            L+ G +   + +   F  E  +   + ++ +  R G +  A+   + +    + T W  
Sbjct: 548 LLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGA 606

Query: 419 LLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           LL G C N  D ++ +     ++E   E +G  +  +      +E  + V ++   I K 
Sbjct: 607 LLCG-CRNYHDIELAEKVAERVFELEPENSG-YYVLLANIYAEAEKWEEVKRLREKIGKQ 664

Query: 478 GFSS---CGYICSSLIKSYVNF 496
           G      C +I    IK  VN 
Sbjct: 665 GLRKNPGCSWI---EIKGKVNL 683



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   +A  L    +L +   G ++HG+I++ G+++D  + N L+ +Y KCG  G   
Sbjct: 428 LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 487

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++LVSWT++++    +G  +  +  + +M+  G  P+E +  S++  C   G
Sbjct: 488 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 547

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA-------KLGDVAAAERVFYSIS-SDDV 211
             E G+          I KN F     L  YA       + G+++ A     ++  + D 
Sbjct: 548 LLEQGWRF------FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDA 601

Query: 212 GCWNAMIGG 220
             W A++ G
Sbjct: 602 TIWGALLCG 610


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 278/575 (48%), Gaps = 2/575 (0%)

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMD 245
           L    K   +  A  +F  +   D   W  +I GY +     EAL + S M  +  + +D
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            +     L+ C L  ++  G  +HG  +++ +  S+ + +AL+DMY+K   +  + KVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  ++ ++W  +  G           + F     S    +   ++I L+       L+ 
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +    L  GF +   V +SL  M+ +CG ++     F  +   ++ +W  +++ Y  
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
              +   L+ F  +  S V  N  TF  V+  C      +   Q+H  ++  GF +   +
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSV 355

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +S++  Y   G+L +  +     +  D+ +W  +++A    G+  EA      +   G 
Sbjct: 356 ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP 415

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KP+E+ L ++L+ C ++   ++ K +H  V+ +G      V SA+I  YAKCG I  A  
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F  S+  +D+I +  +I  YA HG   EA+E+F+ ++   L+P   TF+ V++ACSH G
Sbjct: 476 IFMDSWK-DDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           +VD G   F SM   Y + PS + YGC++D+L R G L DA+ +I  MP Q    V+ +L
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  CRIHG+ + G+ A+ ++L L P     H+ L+
Sbjct: 595 LRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLA 629



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 267/600 (44%), Gaps = 31/600 (5%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           AK+     +L ++ L   ++ H     F+N  D+   NN + +  K  +      +FD++
Sbjct: 21  AKTNDNPRHLYTKPLSLTLNAH-----FSNKVDLAEANNQLKILVKTNHLKDARDLFDQL 75

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFG 164
            +R+ VSWT I+S  + + +    L+++  M+    +  + F +   +K C       +G
Sbjct: 76  PQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYG 135

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            ++H F++K  +  + FVG ++L+ Y K+G++  + +VF  + + +   W A+I G    
Sbjct: 136 TNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY    L   S M    +  D Y +  AL+  +     + GR IH   ++   + +  + 
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L  MY K   +DY    F +M   DV+SW T+   + +          F +   S   
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TFS ++  C     L  G QL    L  GF++  +V +S++ ++ +CG +     V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++ +++I TW+ +++ Y       +  +    +   G + N      V+  C      
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +   Q+H  ++  G      +CS+LI  Y   G +  + +    + + D+ SW AM+S  
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF---- 580
              GH+ EA+ +F ++ + G +PD      +L +C+           H  ++ LGF    
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFN 544

Query: 581 --NTEVYVASA------VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             + + ++  +      +ID   + G +  A           D +V++TL+ A   HG V
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 237/544 (43%), Gaps = 33/544 (6%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR DP  L+  L       + + GT +HG  VK G  N +F+ + L+ MY K G  G 
Sbjct: 110 SELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGR 169

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             +VFDEM  RN V+WT +++  ++ G  + GL  +  M  +    + +A    +K    
Sbjct: 170 SCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASAD 229

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            GA   G SIH   LK   ++N FV  S+   Y K G +      F  + + DV  W  +
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTI 289

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +  Y   G     L     M    +  ++YTF   +  C+  A    G Q+H  ++    
Sbjct: 290 VTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             ++S+ N+++ +Y K   +    KVF  M  +D+I+W+T+   +S+     +      +
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +PN    + +L  CG +  L+ G QL    L  G      V S+LI M+ +CG+
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGS 469

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A  +F +    +I +W  ++SGY  +    + ++ F NI + G+  +  TF  V+  
Sbjct: 470 IAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTA 529

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C            H  ++  GF    Y  +S+ K Y     +  S E            +
Sbjct: 530 CS-----------HAGMVDLGF----YYFNSMSKDY----HITPSKEH-----------Y 559

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G M+  L   G  H+A T+  S+     + D+ +  T+L +C   G     +     V+K
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616

Query: 578 LGFN 581
           L  N
Sbjct: 617 LDPN 620



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 205/428 (47%), Gaps = 11/428 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   +K GF  + F+ N+L  MY+KCG   +GL  F +M   ++VSWT IV+A IQ
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+ D GL+ +  M+ +  +PNE+   +V+  C +    ++G  +H   L +       V
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSV 355

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  Y+K G++A+  +VF S+   D+  W+ +I  Y+  GYG EA   +S M  EG 
Sbjct: 356 ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP 415

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +++   + L  C  +A  + G+Q+H  ++   +E +  + +ALI MY K   +  A K
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F      D+ISW  +  G++E+ +  +   LF      G RP+ VTF  +L  C     
Sbjct: 476 IFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGM 535

Query: 363 LDLGL-QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           +DLG      ++        +     +I + CR G +  A ++  ++  + +   W+ LL
Sbjct: 536 VDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595

Query: 421 SG-------YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
                     C     A+VLK   N   +G  +     F        + N +M+ +  G 
Sbjct: 596 RACRIHGDVDCGQRAAAEVLKLDPNC--AGTHITLANIFAAKGKWKEAANIRMLMKSKGV 653

Query: 474 IIKTGFSS 481
           + + G+SS
Sbjct: 654 VKEPGWSS 661


>gi|302766669|ref|XP_002966755.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
 gi|300166175|gb|EFJ32782.1| hypothetical protein SELMODRAFT_85926 [Selaginella moellendorffii]
          Length = 811

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 166/614 (27%), Positives = 292/614 (47%), Gaps = 16/614 (2%)

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGF 228
           A+ +  E++  V  ++++ Y+K G +  A RVF  YS+ S  +  W AM+ GYA  G+  
Sbjct: 51  AVAVAGEEDDLVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSR 110

Query: 229 EALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           +AL +    L       D    ++A+  CS     D GR IH  I   E++    + N L
Sbjct: 111 QALELYQRFLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGL 170

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ++MY +   +  A K FE++  K+++SWN + G +++  + G    LF +    G   + 
Sbjct: 171 VNMYGRCKELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADA 230

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
           VTF  +L  CG +       ++       G   +  V SSL+  + +CG +  A  VFD 
Sbjct: 231 VTFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDT 290

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +  KN  T   +L+ Y  +    + L+ +  +   G + +  TF   ++ C         
Sbjct: 291 MPLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQG 350

Query: 468 GQIHGAIIKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
             IH  ++ +G      +   ++L+  Y   G LD +    +G    +  +W A+M +  
Sbjct: 351 RAIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYA 410

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G+  EA+ ++HS+     +P+      +L +C+ +GA  + ++ H  +   GF  EV 
Sbjct: 411 QWGYGKEALNLYHSM---DAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVE 467

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           V  A+++ Y KCG ++ A   F +      V+ +   ++A AHHG   E + +F +M+L 
Sbjct: 468 VGVALVNMYGKCGSLEDALGTFAK-LERKTVVTWTVAMLALAHHGEFRETLRLFTEMELD 526

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            + P     ++ + ACSH G + +G   F +M   YG+ P+   Y C+VD+L R G L  
Sbjct: 527 GVAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGR 586

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGN-KELGEWASEKLLLLLPKNDAAHVLLS---- 760
           A+ +I+ MPF+PS   + +LL+ CR H    +  + A++K L   P N   +  LS    
Sbjct: 587 AEELIDSMPFEPSAVTWTTLLAACRTHSTLYDKAKVAADKALETEPHNAGIYFALSYMYS 646

Query: 761 --KRKRQREGNLLD 772
             +  RQ   N+ D
Sbjct: 647 GVRTYRQERLNVSD 660



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/582 (23%), Positives = 257/582 (44%), Gaps = 17/582 (2%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDM 128
           V +    D  +   L+ MYSKCG      RVFD+ +   + +  WT +VS    +G    
Sbjct: 52  VAVAGEEDDLVATALVDMYSKCGSLDDARRVFDDYSVDSKRMALWTAMVSGYALHGHSRQ 111

Query: 129 GLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
            L++Y   +  +   P+   + S +  C S    + G +IH       ++ +  +G  ++
Sbjct: 112 ALELYQRFLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLV 171

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           N Y +  ++  A + F  I++ ++  WN +IG YA  G+   A+ +   M  EG+  D  
Sbjct: 172 NMYGRCKELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAV 231

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           TF++ L  C  V      R+IH  +  S +E  + + ++L++ Y K   +  A +VF+ M
Sbjct: 232 TFLHVLDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTM 291

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             K+ ++  ++   ++++    +   ++ +    G + + VTF   L  C  +  L  G 
Sbjct: 292 PLKNTVTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGR 351

Query: 368 QLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
            +    L  G + + +V   ++L+ M+ RCG ++ A S+FD ++ KN  TWN L+  Y  
Sbjct: 352 AIHSRLLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQ 411

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGY 484
                + L  + ++     + N  TF  ++ T C +    + G+  H  +   GF     
Sbjct: 412 WGYGKEALNLYHSM---DAQPNSLTFLAML-TACSTVGALLQGRAAHARLAPAGFEKEVE 467

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           +  +L+  Y   G L+++       ER  + +W   M AL H G   E + +F  +   G
Sbjct: 468 VGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDG 527

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGA 603
             PD   L   L +C+  G  +  +S    +I+  G +  +     V+D   + G +  A
Sbjct: 528 VAPDSVALLAALFACSHSGKLKEGRSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRA 587

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
               D        + + TL+ A   H        ++DK K+A
Sbjct: 588 EELIDSMPFEPSAVTWTTLLAACRTHS------TLYDKAKVA 623



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 195/432 (45%), Gaps = 5/432 (1%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
            +F S S    D + L  +++   + +    G  +H  I      +   L N L+ MY +
Sbjct: 117 QRFLSVSSEPPDTVMLLSAITACSSAEFLDDGRAIHAQISSRELDHHTHLGNGLVNMYGR 176

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C       + F+++  +NLVSW +I+ A  Q G     ++++  M   G   +      V
Sbjct: 177 CKELHRARKAFEKITAKNLVSWNVIIGAYAQEGHRGHAMELFQRMDPEGVAADAVTFLHV 236

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C  + A+     IH       +E + FV  S++N Y K G +A A+RVF ++   + 
Sbjct: 237 LDACGGVEAAGDVRRIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNT 296

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
               +M+  YA  G G EAL +   M  +G   D+ TFI+AL  CS +     GR IH  
Sbjct: 297 VTMTSMLAAYAQHGLGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSR 356

Query: 272 IIRSEV--ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           ++ S +  +  + +  AL++MY +   +D A  +F+ MADK+ I+WN L G +++     
Sbjct: 357 LLVSGIIQQPDVVLGTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGK 416

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +  +L+H      ++PN +TF  +L  C  +  L  G          GF  E  V  +L+
Sbjct: 417 EALNLYHSM---DAQPNSLTFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALV 473

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG++E A   F  +  K + TW   +     +    + L+ F  +   GV  +  
Sbjct: 474 NMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSV 533

Query: 450 TFFYVVETCCRS 461
                +  C  S
Sbjct: 534 ALLAALFACSHS 545



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 174/367 (47%), Gaps = 17/367 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  +   G   D+F+ ++L+  Y KCG      RVFD M  +N V+ T +++A  Q+G
Sbjct: 251 RIHKKLELSGLEWDVFVASSLVNAYGKCGCLAEAKRVFDTMPLKNTVTMTSMLAAYAQHG 310

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-- 182
             +  L++Y +M++ G   +     S +  C S+GA   G +IH   L   I + P V  
Sbjct: 311 LGEEALEIYREMESQGRKADRVTFISALDACSSIGALSQGRAIHSRLLVSGIIQQPDVVL 370

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++LN Y + G + AA+ +F  ++  +   WNA++G YA  GYG EALN+  SM  +  
Sbjct: 371 GTALLNMYGRCGVLDAAKSLFDGMADKNTITWNALMGSYAQWGYGKEALNLYHSMDAQPN 430

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
           ++   TF+  L  CS V     GR  H  +  +  E  + +  AL++MY K   ++ A  
Sbjct: 431 SL---TFLAMLTACSTVGALLQGRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALG 487

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            F ++  K V++W       + +    +T  LF +  L G  P+ V     L  C     
Sbjct: 488 TFAKLERKTVVTWTVAMLALAHHGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGK 547

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIY------MFCRCGAVEMAHSVFDNVSYK-NITT 415
           L  G      +     + +  V+ +L +      + CR G +  A  + D++ ++ +  T
Sbjct: 548 LKEG-----RSYFTNMIQDYGVSPTLAHYDCVVDLLCRTGLLGRAEELIDSMPFEPSAVT 602

Query: 416 WNELLSG 422
           W  LL+ 
Sbjct: 603 WTTLLAA 609



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 52/104 (50%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  +   GF  ++ +   L+ MY KCG     L  F ++  + +V+WT+ + A   
Sbjct: 450 GRAAHARLAPAGFEKEVEVGVALVNMYGKCGSLEDALGTFAKLERKTVVTWTVAMLALAH 509

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +GEF   L+++ +M+ +G  P+  A+ + +  C   G  + G S
Sbjct: 510 HGEFRETLRLFTEMELDGVAPDSVALLAALFACSHSGKLKEGRS 553


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 279/535 (52%), Gaps = 2/535 (0%)

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
           GF   N    + F G    +    +AL  C      ++GR+ H  +++  +     +  +
Sbjct: 94  GFFTRNETPHVEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTS 153

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           LIDMY K   +D A +V+++M   D  + N L   ++ N    Q   +F +    G+RPN
Sbjct: 154 LIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPN 213

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           H T+S +L  CG +  +  G QL    +   +L E  V ++L+ ++ +CG +E A  VF+
Sbjct: 214 HYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFE 273

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           ++  +NI +W   ++G+  +      LK F  + ESG+E N  TF  V+ +C   ++   
Sbjct: 274 SLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFID 333

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALV 525
               H  +IK G +S  ++ +++I  Y   G++D +  +F          SW A+++  V
Sbjct: 334 GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYV 393

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
                 +A+  F  +V+     +E+    I  +C++  +   T  IH  +IK    + ++
Sbjct: 394 LNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLH 453

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           VAS++I+AY +CG ++ A   F Q  +  DV+ +N++I AY+ +G   +A+ +  KM   
Sbjct: 454 VASSLIEAYTQCGSLENAVQVFTQ-ISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEE 512

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
             +P+  TF++V+SACSH GLV +G   FKSM   Y +QP      C+VD+L R G LE+
Sbjct: 513 GNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLEN 572

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           A   I+ +  +P+ +++R LL+ CR + N ++ E+ +EK+L L P +   +V LS
Sbjct: 573 ALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLS 627



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 248/496 (50%), Gaps = 32/496 (6%)

Query: 265  GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            GR +H  ++   +         L+  Y +   +  A K+F+++ + ++  W  L G  + 
Sbjct: 822  GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACAR 881

Query: 325  NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
                 +  S F +    G RPN      +L+ CG L D   G  +  + L   F  +  +
Sbjct: 882  RGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYI 941

Query: 385  TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
             S+LIYM+ +CG VE A  VFD +  K++   N ++SGY  +    + L     + ++GV
Sbjct: 942  ISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV 1001

Query: 445  EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
            + N  ++  ++    +  ++ MV ++   +                              
Sbjct: 1002 KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMT----------------------------- 1032

Query: 505  FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +NG E  D+ SW +++S  V   HNHE    F  +++ G  P    + ++L +C  +  
Sbjct: 1033 -ANGVEP-DVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVAN 1090

Query: 565  YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
             +  K IH + + +G   +VYV SA++D YAKCG I  A++ F      N V  +N+LI 
Sbjct: 1091 LRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV-TWNSLIF 1149

Query: 625  AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
             YA+HG  +EA+E+F++M+ ++ +    TF +V++ACSH G+V+ G  LF  M  +Y ++
Sbjct: 1150 GYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIE 1209

Query: 685  PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
            P  + Y C+VD+L R G L +A  +I+ MP +P   V+ +LL  CR HGN EL E A+E 
Sbjct: 1210 PRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEH 1269

Query: 745  LLLLLPKNDAAHVLLS 760
            L  L P++  + +LLS
Sbjct: 1270 LFELEPESPGSSLLLS 1285



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 241/523 (46%), Gaps = 6/523 (1%)

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           G  P+   V S +  C   G  E G   HCF +KI +  + FV  S+++ YAK G+V +A
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            RV+  ++S D    N +I  YA  G+  +A  V   +   G   + YT+   L  C  +
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           +    G+Q+H  +++ +     ++ NAL+ +Y K   M+ A  VFE +  +++ISW    
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            GF ++ +  +    F     SG  PN  TFSI+L  CG + D   G       +  G  
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMA 347

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTWNELLSGYCFNCCDADVLKTFC 437
               V +++I M+   G ++ A   F  +  +  N+ +WN L++GY  N      ++ FC
Sbjct: 348 SGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNV-SWNALIAGYVLNEKIEKAMEAFC 406

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            + +  V  N  T+  + + C    +     QIH  +IK+   S  ++ SSLI++Y   G
Sbjct: 407 RMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCG 466

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            L+N+ +        D+ SW +++ A    G   +A+ +   ++E G KP      T+L+
Sbjct: 467 SLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLS 526

Query: 558 SCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           +C+  G  Q  +     +++      E    S ++D   + G ++ A     +       
Sbjct: 527 ACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTA 586

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            ++  L+ A  ++  +  A  + +  K+ +L+P+ AT    +S
Sbjct: 587 SIWRPLLAACRYNSNLQMAEYVAE--KILDLEPNDATVYVTLS 627



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 233/507 (45%), Gaps = 4/507 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG + H  +VK+G  +D F+  +LI MY+KCG     +RV+D+M   +  +   ++SA  
Sbjct: 131 LGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYA 190

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG F    ++++ +   G  PN +   +++ VC ++ A + G  +H   +K++      
Sbjct: 191 RNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETA 250

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++L  Y+K G +  AE VF S+   ++  W A I G+   G   +AL   S M   G
Sbjct: 251 VGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESG 310

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  +++TF   L  C  V DF  GR  H  +I+  +   + +  A+IDMY     MD A 
Sbjct: 311 IEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAE 370

Query: 302 KVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           K F++M      +SWN L  G+  N+   +    F + +      N  T+S + + C   
Sbjct: 371 KQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSF 430

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L   +Q+    +        +V SSLI  + +CG++E A  VF  +S  ++ +WN ++
Sbjct: 431 PSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSII 490

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GF 479
             Y  N      +     + E G +    TF  V+  C  S   Q   +   ++++    
Sbjct: 491 KAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSI 550

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-WGAMMSALVHQGHNHEAVTIFH 538
                 CS ++      GQL+N+ +F         AS W  +++A  +  +   A  +  
Sbjct: 551 QPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAE 610

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAY 565
            +++  E  D  +  T+ N  A +G +
Sbjct: 611 KILDL-EPNDATVYVTLSNMYAEVGRW 636



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/512 (23%), Positives = 223/512 (43%), Gaps = 64/512 (12%)

Query: 48   AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
            AK++ +    ++   G  +H H+V +G     +    L++ Y++CG      ++FD++  
Sbjct: 807  AKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPN 866

Query: 108  RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
             N+  W ++  A  + G ++  L  + +M+  G  PN+F + S++K C  +     G ++
Sbjct: 867  TNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENM 926

Query: 168  HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
            H   LK   E + ++  +++  Y+K G V  A RVF  I   D+   NAM+ GYA  G+ 
Sbjct: 927  HTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFV 986

Query: 228  FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             EALB+V  M   G+  +  ++   + G S V D  +  ++  L+  + VE         
Sbjct: 987  HEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVE--------- 1037

Query: 288  IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
                                   DV+SW ++  GF +N +  +    F + +  G  P+ 
Sbjct: 1038 ----------------------PDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSS 1075

Query: 348  VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            VT S LL  C  + +L  G ++   A+  G   +  V S+L+ M+ +CG +  A  +F  
Sbjct: 1076 VTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYM 1135

Query: 408  VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
            +  +N  TWN L+ GY  +    + ++ F  + ES  +++  TF  V+  C         
Sbjct: 1136 MPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACS-------- 1187

Query: 468  GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
               H  +++ G S               F ++   +      E      +  M+  L   
Sbjct: 1188 ---HAGMVELGESL--------------FXKMQEKYRIEPRLEH-----YACMVDLLGRA 1225

Query: 528  GHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            G   EA  +  ++     +PD+++ G +L +C
Sbjct: 1226 GKLSEAYDLIKAM---PVEPDKFVWGALLGAC 1254



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 152/334 (45%), Gaps = 39/334 (11%)

Query: 40   LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            LR +   L   L    +L  R  G  +H  I+K  F +D ++ + LI MYSKCG+     
Sbjct: 900  LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 959

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            RVFD + +++LV    +VS   Q+G     L +   M+  G  PN  +  +++       
Sbjct: 960  RVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIA------ 1013

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD----DVGCWN 215
                G+S                         ++GD +    VF  ++++    DV  W 
Sbjct: 1014 ----GFS-------------------------QVGDKSMVSEVFRLMTANGVEPDVVSWT 1044

Query: 216  AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            ++I G+    +  E  +    ML +G      T  + L  C+ VA+   G++IHG  +  
Sbjct: 1045 SVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVI 1104

Query: 276  EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             VE  + + +AL+DMY K   +  A  +F  M +++ ++WN+L  G++ +    +   LF
Sbjct: 1105 GVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELF 1164

Query: 336  HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            ++   S ++ +H+TF+ +L  C     ++LG  L
Sbjct: 1165 NQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 1198



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 125/262 (47%), Gaps = 6/262 (2%)

Query: 72   KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA----ERNLVSWTLIVSAAIQNGEFD 127
            + G   ++   N LIA +S+ G       VF  M     E ++VSWT ++S  +QN    
Sbjct: 998  QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNH 1057

Query: 128  MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
             G   + +M   GF P+   + S++  C ++     G  IH +A+ I +EK+ +V  +++
Sbjct: 1058 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALV 1117

Query: 188  NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
            + YAK G ++ A+ +FY +   +   WN++I GYA+ GY  EA+ + + M      +D  
Sbjct: 1118 DMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHL 1177

Query: 248  TFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            TF   L  CS     ++G  +   +  +  +E  +     ++D+  ++  +  A+ + + 
Sbjct: 1178 TFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKA 1237

Query: 307  MA-DKDVISWNTLFGGFSENKN 327
            M  + D   W  L G    + N
Sbjct: 1238 MPVEPDKFVWGALLGACRNHGN 1259



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 19/320 (5%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RNLVSWTL 115
           +K  + G   H  ++K G  + +F+   +I MYS  G      + F +M    + VSW  
Sbjct: 328 VKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNA 387

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           +++  + N + +  ++ +  M       NEF   ++ K C S  +      IH   +K  
Sbjct: 388 LIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSN 447

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +E N  V  S++  Y + G +  A +VF  IS  DV  WN++I  Y+  G  ++A+ ++ 
Sbjct: 448 VESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLR 507

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR------SEVECSISIVNALID 289
            M+ EG      TF+  L  CS       G++    +++       E  CS      ++D
Sbjct: 508 KMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCS-----CMVD 562

Query: 290 MYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSRPN-- 346
           +  ++  ++ A    +++  K   S W  L      N N  Q A    + IL    PN  
Sbjct: 563 ILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNL-QMAEYVAEKILD-LEPNDA 620

Query: 347 --HVTFSILLRQCGKLLDLD 364
             +VT S +  + G+  D +
Sbjct: 621 TVYVTLSNMYAEVGRWADAE 640



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 17/177 (9%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  R +++H  ++ +G     Y A+ ++  Y +CG +  AR  FD+  N+N +  +  L 
Sbjct: 818 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTN-IRRWIVLT 876

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG-----CLLFKSMD 678
            A A  G   EA+  F +M+   L+P+Q    S++ AC H      G      +L  S +
Sbjct: 877 GACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFE 936

Query: 679 SQYGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           S        D Y    L+ M S+ G++E A  V + +       V  +++SG   HG
Sbjct: 937 S--------DAYIISALIYMYSKCGHVEKACRVFDWI-VDKDLVVMNAMVSGYAQHG 984


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/480 (32%), Positives = 258/480 (53%), Gaps = 5/480 (1%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N LIDMY K      A+KVF+ M +++V+SW+ L  G   N +   + SLF +    G  
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TFS  L+ CG L  L+ GLQ+    L  GF     V +SL+ M+ +CG +  A  V
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF-FYVVETCCRSEN 463
           F  +  +++ +WN +++G+      +  L TF  + E+ ++     F    +   C S  
Sbjct: 536 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTG 595

Query: 464 QQMVG-QIHGAIIKTGF--SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               G QIHG ++++GF   S   I  SL+  YV  G L ++ +  +  +   M SW ++
Sbjct: 596 MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSL 655

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +     +G   EA+ +F  L E   + D + L +I+   A     ++ K +    +KL  
Sbjct: 656 ILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPS 715

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             E  V ++V+D Y KCG +  A   F +     DVI +  +I  Y  HGL  +++ IF 
Sbjct: 716 GLETSVLNSVVDMYLKCGLVDEAEKCFAE-MQLKDVISWTVVITGYGKHGLGKKSVRIFY 774

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           +M   N++P +  +++V+SACSH G++ +G  LF  +   +G++P  + Y C+VD+L R 
Sbjct: 775 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 834

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G L++AKH+I+ MP +P+  ++++LLS CR+HG+ ELG+   + LL +  KN A +V++S
Sbjct: 835 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 894



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 198/388 (51%), Gaps = 4/388 (1%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           ++   N LI MY KC       +VFD M ERN+VSW+ ++S  + NG+    L ++ +M 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G  PNEF   + +K C  + A E G  IH F LKI  E    VG S+++ Y+K G + 
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT--MDKYTFINALQG 255
            AE+VF  I    +  WNAMI G+ H GYG +AL+    M    I    D++T  + L+ 
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 256 CSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           CS       G+QIHG ++RS   C  S +I  +L+D+Y+K   +  A K F+++ +K +I
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMI 650

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SW++L  G+++     +   LF +     S+ +    S ++        L  G Q+Q LA
Sbjct: 651 SWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALA 710

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +      E +V +S++ M+ +CG V+ A   F  +  K++ +W  +++GY  +      +
Sbjct: 711 VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 770

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRS 461
           + F  +    +E +   +  V+  C  S
Sbjct: 771 RIFYEMLRHNIEPDEVCYLAVLSACSHS 798



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 177/369 (47%), Gaps = 14/369 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG  +K+GF   + + N+L+ MYSKCG      +VF  + +R+L+SW  +++  + 
Sbjct: 497 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 556

Query: 123 NGEFDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEK 178
            G     L  +  M+       P+EF + S++K C S G    G  IH F ++       
Sbjct: 557 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 616

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  S+++ Y K G + +A + F  I    +  W+++I GYA  G   EA+ +   + 
Sbjct: 617 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 676

Query: 239 FEGITMDKYTFINALQGCSLVADFDI---GRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
                +D +   + +    + ADF +   G+Q+  L ++       S++N+++DMY+K  
Sbjct: 677 ELNSQIDSFALSSII---GVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 733

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            +D A K F  M  KDVISW  +  G+ ++    ++  +F++ +     P+ V +  +L 
Sbjct: 734 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 793

Query: 356 QCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-N 412
            C     +  G +L  + L  H G        + ++ +  R G ++ A  + D +  K N
Sbjct: 794 ACSHSGMIKEGEELFSKLLETH-GIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPN 852

Query: 413 ITTWNELLS 421
           +  W  LLS
Sbjct: 853 VGIWQTLLS 861


>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 170/626 (27%), Positives = 298/626 (47%), Gaps = 43/626 (6%)

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           +N  + + F +  ++++C +  A   G  +H   +   ++ +PF+   ++  YA  GD+ 
Sbjct: 16  SNPNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLG 75

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +A+ +F  +S  +V  W A++G Y+  G   E +   S M  +G+  DKY F    + C 
Sbjct: 76  SAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACG 135

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            +   ++G Q+H  ++    E  + + N+LIDMY KS  +    +VF+ M ++DV+SWN+
Sbjct: 136 QLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNS 195

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  G+  N     +  L     + G  P+ VT++ ++                       
Sbjct: 196 MISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDA--------------------- 234

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
                         +CR G  + A  +F+ +   NI +   L+SGY         L  F 
Sbjct: 235 --------------YCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFR 280

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYIC--SSLIKSYV 494
            +    V          V   CR     + GQ IHG  I++  SS  Y    ++L+  YV
Sbjct: 281 EMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYV 340

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
              ++ ++       +R D+ +W AM+   V     H A+  F  +  +G   ++  + T
Sbjct: 341 KCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITIST 400

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +L +C      +  K +H ++ K  F++ + V +A+I  Y+KCG I  A   F     S 
Sbjct: 401 VLPAC----DLKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMI-SR 455

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D++ +NT+I  +  HGL   A+++   M  +++ P+  TF S +SACSH GLVD+G  LF
Sbjct: 456 DLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELF 515

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            +M   +G  P  + + C+VD+L+R   LEDA   IE MP +PS  ++ +LL+ CR   N
Sbjct: 516 HTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQN 575

Query: 735 KELGEWASEKLLLLLPKNDAAHVLLS 760
             + + A+E+L  L P++   +V LS
Sbjct: 576 VSVAKLAAEQLFQLEPEHAGNYVTLS 601



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/647 (23%), Positives = 283/647 (43%), Gaps = 58/647 (8%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L  N K+   G Q+H HI+  G  +  F+   L+ MY+ CG  G    +FD++++ N+
Sbjct: 30  LQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNV 89

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +WT I+    +NG  D  ++ Y +MK  G +P+++    V + C  +   E G  +H  
Sbjct: 90  FAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKD 149

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +    E +  V  S+++ Y+K GDV +  RVF  +   DV  WN+MI GY   G+   +
Sbjct: 150 VVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFS 209

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + +++SM   G   D  T+                                   N ++D 
Sbjct: 210 VELLASMRIRGFEPDMVTW-----------------------------------NTVMDA 234

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR----PN 346
           Y +    D A+++FE++ + ++IS  TL  G+S   N  ++  +F + +   SR    P+
Sbjct: 235 YCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMM---SRRVAFPD 291

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE----ENVTSSLIYMFCRCGAVEMAH 402
             + S +L  C  L  L  G ++    +    +D     ++  ++L+ M+ +C  ++ A 
Sbjct: 292 LDSLSSVLVSCRHLGALVCGQEIHGYGIRS--VDSSSFYKSAGAALLTMYVKCKRIQDAL 349

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
           +VF+ +   ++ TWN ++ G+         L+ F  +  SG+  N  T   V+  C    
Sbjct: 350 NVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACDLKS 409

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMM 521
            +    Q+H  I K  FSS   + ++LI  Y   G +  ++  FSN   R D+ SW  M+
Sbjct: 410 GK----QVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISR-DLVSWNTMI 464

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGF 580
                 G    A+ +   +  +   P+     + L++C+  G       + H      GF
Sbjct: 465 GGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGF 524

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
              +   S V+D  A+   ++ A    ++        +++ L+ A      VS A     
Sbjct: 525 TPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAK--LA 582

Query: 641 KMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             +L  L+P  A  +V++ +  +  G  D    + K M+ +  ++PS
Sbjct: 583 AEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGLVKPS 629



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 126/285 (44%), Gaps = 8/285 (2%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN--LIAMYSKCGYFGWGLRVFDE 104
           L+  L    +L + V G ++HG+ ++   ++  +      L+ MY KC      L VF+ 
Sbjct: 295 LSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFEL 354

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M   ++V+W  ++   +      + L+ +  M+ +G M N+  + +V+  C      + G
Sbjct: 355 MDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPAC----DLKSG 410

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +H +  K        V  ++++ Y+K G +  A  +F ++ S D+  WN MIGG+   
Sbjct: 411 KQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMH 470

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISI 283
           G G  AL ++  M    +  +  TF +AL  CS     D G ++   + R       +  
Sbjct: 471 GLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEH 530

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKN 327
            + ++D+  ++  ++ A    E+M  K     W+ L       +N
Sbjct: 531 FSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQN 575


>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 731

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 186/679 (27%), Positives = 334/679 (49%), Gaps = 50/679 (7%)

Query: 117 VSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++A  ++GE    LK++ D+ +     P++++V   +     +  + FG  +HC+A++  
Sbjct: 22  LTALTRSGENRNALKLFADVHRCITLRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSG 81

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSI----------------------------- 206
           +  +  V  ++L+ YA+LG++A+ +R F  I                             
Sbjct: 82  LLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFD 141

Query: 207 ---SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
                DDV  WNAMI G    GY   ++ +   M   G+  DK+ F   L  C      D
Sbjct: 142 KMPERDDVAVWNAMITGCKESGYHGTSIELFREMHKLGVRHDKFGFATVLSMC-YYGSLD 200

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGG 321
            G+Q+H L+I++    + S+VNALI MY     +  A  VFE   +A +D +++N +  G
Sbjct: 201 FGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDG 260

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
            +  K   ++  +F + + +G RP  +TF  ++  C       +G Q+  L++  G+ + 
Sbjct: 261 LAGFKRE-ESLLVFRQMVEAGLRPTDLTFVSVMSSCSCE---TMGHQVHGLSIKTGYEEY 316

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V++S + M+        AH VF+++  K++ TWN ++SGY         L  +  +  
Sbjct: 317 TLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQANLGQSALLLYKRMHG 376

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV+ +  TF  ++ +    +  +MV      +IK G SS   I ++LI +Y   G++  
Sbjct: 377 IGVKPDEFTFGSLLASSLDLDALEMV---QACVIKFGLSSKIEISNALISAYSKHGKITK 433

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK--PDEYILGTILNSC 559
           +      + + ++ SW A++S   H G + E +  F  L+EA     PD Y L  +L+ C
Sbjct: 434 ADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAEVLIIPDAYTLSILLSIC 493

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
             I +    +  H + ++ G   E  + +A I+ Y++CG ++ +   F Q  +  D + +
Sbjct: 494 VDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQ-MSDKDTVSW 552

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           N+LI AYA HG    A+  +  M+    + P  AT  +V+SAC H GLV +G  +F SM 
Sbjct: 553 NSLISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACGHAGLVKEGLEIFNSMV 612

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI--MPFQPSPTVYRSLLSGCRIHGNKE 736
             +G+ P+ D + CLVD+L R G+L++A+ +++I          V+ +L S C  HG+ +
Sbjct: 613 EFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK 672

Query: 737 LGEWASEKLLLLLPKNDAA 755
           LG+  + +LL+   KND +
Sbjct: 673 LGKMVA-RLLMEKEKNDPS 690



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 155/639 (24%), Positives = 284/639 (44%), Gaps = 64/639 (10%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D   ++ +++ + +L+  + G QVH + ++ G      + N L+++Y++ G      
Sbjct: 47  LRPDQYSVSLAITAAGHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLK 106

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFD-------------------------------- 127
           R F+E+ E ++ SWT ++SA+ + G+ +                                
Sbjct: 107 RKFEEIIEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHG 166

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
             ++++ +M   G   ++F   +V+ +C   G+ +FG  +H   +K       FV  SV+
Sbjct: 167 TSIELFREMHKLGVRHDKFGFATVLSMCY-YGSLDFGKQVHSLVIKAGF----FVASSVV 221

Query: 188 N----FYAKLGDVAAAERVFYS--ISSDDVGCWNAMIGGYAHCGYGF---EALNVVSSML 238
           N     Y     V  A  VF    ++  D   +N +I G A    GF   E+L V   M+
Sbjct: 222 NALITMYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDGLA----GFKREESLLVFRQMV 277

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G+     TF++ +  CS      +G Q+HGL I++  E    + N+ + MY       
Sbjct: 278 EAGLRPTDLTFVSVMSSCSCET---MGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFG 334

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQC 357
            A KVFE + +KD+I+WNT+  G+++  N GQ+A L +K +   G +P+  TF  LL   
Sbjct: 335 AAHKVFESLEEKDLITWNTMISGYNQ-ANLGQSALLLYKRMHGIGVKPDEFTFGSLLASS 393

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
              LDLD    +Q   +  G   +  ++++LI  + + G +  A  +F++   KN+ +WN
Sbjct: 394 ---LDLDALEMVQACVIKFGLSSKIEISNALISAYSKHGKITKADLIFESSPKKNLISWN 450

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAII 475
            ++SG+  N    + L+ F  + E+ V +  +  T   ++  C    +  +  Q H   +
Sbjct: 451 AIISGFYHNGFSFEGLERFSCLLEAEVLIIPDAYTLSILLSICVDISSLMLGEQTHAYAL 510

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + G      I ++ I  Y   G L  S    +     D  SW +++SA    G    AV 
Sbjct: 511 RHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVL 570

Query: 536 IFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDA 593
            + ++ + G+  PD   L  +L++C   G  +    I   +++  G    V   S ++D 
Sbjct: 571 TYKTMQDEGKVDPDAATLSAVLSACGHAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDL 630

Query: 594 YAKCGDIKGAR--MAFDQSFNSNDVIVYNTLIMAYAHHG 630
             + G +  A   +   +    + V V+  L  A A HG
Sbjct: 631 LGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 669



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 227/534 (42%), Gaps = 33/534 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE--MAERNLVSWTLIVSAA 120
           G QVH  ++K GF     + N LI MY  C        VF+E  +A R+ V++ +++   
Sbjct: 202 GKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVAVRDQVTFNVVID-G 260

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +   + +  L ++  M   G  P +    SVM  C        G+ +H  ++K   E+  
Sbjct: 261 LAGFKREESLLVFRQMVEAGLRPTDLTFVSVMSSC---SCETMGHQVHGLSIKTGYEEYT 317

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  S +  Y+   D  AA +VF S+   D+  WN MI GY     G  AL +   M   
Sbjct: 318 LVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQANLGQSALLLYKRMHGI 377

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D++TF  +L   SL  D D    +   +I+  +   I I NALI  Y K   +  A
Sbjct: 378 GVKPDEFTF-GSLLASSL--DLDALEMVQACVIKFGLSSKIEISNALISAYSKHGKITKA 434

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR--PNHVTFSILLRQCG 358
             +FE    K++ISWN +  GF  N    +    F   + +     P+  T SILL  C 
Sbjct: 435 DLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAEVLIIPDAYTLSILLSICV 494

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            +  L LG Q    AL  G   E  + ++ I M+ +CG ++ + +VF  +S K+  +WN 
Sbjct: 495 DISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNS 554

Query: 419 LLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRS-------ENQQMVGQI 470
           L+S Y  +      + T+  + + G V+ +  T   V+  C  +       E    + + 
Sbjct: 555 LISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACGHAGLVKEGLEIFNSMVEF 614

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-----RLDMASWGAMMSALV 525
           HG I      SC      L+      G LD +      +E     R+D+  W A+ SA  
Sbjct: 615 HGLIPNVDHFSC------LVDLLGRAGHLDEAESLVKISEKTIGSRVDV--WWALFSACA 666

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
             G       +   L+E  EK D  +   + N  A  G ++  +     +  +G
Sbjct: 667 AHGDLKLGKMVARLLMEK-EKNDPSVYVQLSNIYAGAGLWKEAEETRKAINMIG 719


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  268 bits (686), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 166/604 (27%), Positives = 306/604 (50%), Gaps = 8/604 (1%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G ++H   L      +  +  S++N YAK    + A  VF SI++ DV  WN +I  ++ 
Sbjct: 29  GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQ 88

Query: 224 CGYGFEALNVVS-----SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
                 +L+V+       M  + I  + +T        S ++D   GRQ H L +++   
Sbjct: 89  QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH-- 336
             +   ++L++MY K+  +  A  +F+ M +++ +SW T+  G++  +   +   LF   
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLM 208

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +    G   N   F+ +L      + ++ G Q+  LA+  G +   +V ++L+ M+ +CG
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCG 268

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           ++E A   F+    KN  TW+ +++G+         LK F ++ +SG   +  T   V+ 
Sbjct: 269 SLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVIN 328

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C  +       Q+HG  +K G+    Y+ S+L+  Y   G + ++ +     ++ D+  
Sbjct: 329 ACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVL 388

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W ++++  V  G    A+ ++  +   G  P++  + ++L +C+ + A  + K +H  +I
Sbjct: 389 WTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGII 448

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K  F+ E+ + SA+   YAKCG +      F     + DVI +N +I   + +G  +E +
Sbjct: 449 KYNFSLEIPIGSALSAMYAKCGSLDDGYRIF-WRMPARDVISWNAMISGLSQNGRGNEGL 507

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           E+F+KM L   +P   TFV+++SACSH GLVD+G + FK M  ++ + P+ + Y C+VD+
Sbjct: 508 ELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDI 567

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           LSR G L +AK  IE         ++R LL+  + H + +LG +A EKL+ L     +A+
Sbjct: 568 LSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAY 627

Query: 757 VLLS 760
           VLLS
Sbjct: 628 VLLS 631



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/580 (25%), Positives = 258/580 (44%), Gaps = 18/580 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+  G  +   + N+LI +Y+KC +F     VFD +  +++VSW  +++A  Q
Sbjct: 29  GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQ 88

Query: 123 NGEFD-----MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
                     M L   + M     +PN   +  V     ++  S  G   H  A+K    
Sbjct: 89  QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + F   S+LN Y K G V  A  +F  +   +   W  MI GYA      EA  +   M
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLM 208

Query: 238 LFE--GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
             E  G   +++ F + L   +     + GRQ+H L +++ + C +S+ NAL+ MY+K  
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCG 268

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A K FE   +K+ I+W+ +  GF++  +  +   LF+    SG  P+  T   ++ 
Sbjct: 269 SLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVIN 328

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C     +  G Q+   +L  G+  +  V S+L+ M+ +CG++  A   F+ +   ++  
Sbjct: 329 ACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVL 388

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           W  +++GY  N      L  +  +   GV  N  T   V++ C          Q+H  II
Sbjct: 389 WTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGII 448

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K  FS    I S+L   Y   G LD+ +         D+ SW AM+S L   G  +E + 
Sbjct: 449 KYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLE 508

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV----- 590
           +F  +   G KPD      +L++C+ +G   R         K+ F+ E  +A  V     
Sbjct: 509 LFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGW----VYFKMMFD-EFNIAPTVEHYAC 563

Query: 591 -IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +D  ++ G +  A+   + +   + + ++  L+ A  +H
Sbjct: 564 MVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNH 603



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 26/519 (5%)

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           + AL  C+       GR +H  I+ +    S  I N+LI++Y K S    A  VF+ + +
Sbjct: 14  LRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINN 73

Query: 310 KDVISWNTLFGGFSENKNPGQT---ASLFHKFILSGSR--PNHVTFSILLRQCGKLLDLD 364
           KDV+SWN L   FS+ +    +     LF + +++     PN  T + +      L D  
Sbjct: 74  KDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSR 133

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q   LA+      +    SSL+ M+C+ G V  A  +FD +  +N  +W  ++SGY 
Sbjct: 134 AGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYA 193

Query: 425 FNCCDADVLKTF--CNIWESGVEVNGCTFFYVVE--TCCRSENQQMVGQIHGAIIKTGFS 480
                 +  + F      E G   N   F  V+   TC    N     Q+H   +K G  
Sbjct: 194 SQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGR--QVHSLAMKNGLV 251

Query: 481 SCGYICSSLIKSYVNFGQLDN---SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
               + ++L+  YV  G L++   +FE S     +   +W AM++     G + +A+ +F
Sbjct: 252 CIVSVANALVTMYVKCGSLEDALKTFELSGNKNSI---TWSAMVTGFAQFGDSDKALKLF 308

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           + + ++GE P E+ L  ++N+C+   A    + +H + +KLG+  ++YV SA++D YAKC
Sbjct: 309 YDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKC 368

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G I  AR  F +     DV+++ ++I  Y  +G    A+ ++ KM+L  + P+  T  SV
Sbjct: 369 GSIVDARKGF-ECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASV 427

Query: 658 MSACSHKGLVDKGCLLFKSMDS---QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
           + ACS+   +D+G    K M +   +Y           L  M ++ G L+D   +   MP
Sbjct: 428 LKACSNLAALDQG----KQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP 483

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
            +   + + +++SG   +G    G    EK+ L   K D
Sbjct: 484 ARDVIS-WNAMISGLSQNGRGNEGLELFEKMCLEGTKPD 521



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 112/205 (54%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V G Q+HG+ +KLG+   +++ + L+ MY+KCG      + F+ + + ++V WT I++  
Sbjct: 337 VEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGY 396

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +QNG+++  L +Y  M+  G +PN+  + SV+K C ++ A + G  +H   +K       
Sbjct: 397 VQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEI 456

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +G ++   YAK G +    R+F+ + + DV  WNAMI G +  G G E L +   M  E
Sbjct: 457 PIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLE 516

Query: 241 GITMDKYTFINALQGCSLVADFDIG 265
           G   D  TF+N L  CS +   D G
Sbjct: 517 GTKPDNVTFVNLLSACSHMGLVDRG 541



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/399 (23%), Positives = 174/399 (43%), Gaps = 12/399 (3%)

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
            H+     L  C +   L  G  L    L  G      + +SLI ++ +C     A+ VF
Sbjct: 9   QHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVF 68

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTF-----CNIWESGVEVNGCTFFYVVETCCR 460
           D+++ K++ +WN L++ +      A  L          +    +  N  T   V      
Sbjct: 69  DSINNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAST 128

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
             + +   Q H   +KT  S   +  SSL+  Y   G +  + +  +     +  SW  M
Sbjct: 129 LSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATM 188

Query: 521 MSALVHQGHNHEAVTIFHSLV--EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +S    Q    EA  +F  +   E G+  +E++  ++L++          + +H   +K 
Sbjct: 189 ISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN 248

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           G    V VA+A++  Y KCG ++ A   F+ S N N  I ++ ++  +A  G   +A+++
Sbjct: 249 GLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNS-ITWSAMVTGFAQFGDSDKALKL 307

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK-SMDSQYGMQPSPDCYGCLVDML 697
           F  M  +   PS+ T V V++ACS    + +G  +   S+   Y +Q        LVDM 
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLY--VLSALVDMY 365

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           ++ G + DA+   E +  QP   ++ S+++G   +G+ E
Sbjct: 366 AKCGSIVDARKGFECIQ-QPDVVLWTSIITGYVQNGDYE 403



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + +A  L    NL +   G Q+H  I+K  F+ +I + + L AMY+KCG    G R+F
Sbjct: 420 NDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIF 479

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R+++SW  ++S   QNG  + GL+++  M   G  P+     +++  C  MG  +
Sbjct: 480 WRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVD 539

Query: 163 FGY 165
            G+
Sbjct: 540 RGW 542


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 296/601 (49%), Gaps = 16/601 (2%)

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           C  L+   K G +  A  +F  +   +V  W   I G    G    A  + + ML  G+ 
Sbjct: 74  CKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVA 133

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + +    AL  C+      +G Q+H L +R+       I + LI++Y +   +  A +V
Sbjct: 134 PNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEV 193

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F RM   DV+ + +L      N    +   +  +    G +PN  T + +L +C +    
Sbjct: 194 FRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR---- 249

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            +G Q+    L          +++LI  + R G    A +VF+N+  KN+ +W  ++   
Sbjct: 250 GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLC 309

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +    D L+ F  +   GV+ N   F   +  C    +  +  QIH + IK    +  
Sbjct: 310 IRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDI 366

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y   G +          E  D+ SW A +SA    G + +AV +   +   
Sbjct: 367 RVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSE 426

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  P++Y   + L+SCA +    + + +H   +KLG + +V   +A+I+ Y+KCG I  A
Sbjct: 427 GFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSA 486

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R+AFD   +++DV+ +N+LI   A HG  + A+E F +M  ++ +P  +TF+SV+  C+H
Sbjct: 487 RLAFD-VMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNH 545

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            GLV +G   F+ M  +YG+ P+P  Y C++DML RNG   +A  +IE MPF+P   +++
Sbjct: 546 AGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWK 605

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEG 775
           +LL+ C++H N ++G+ A++KL+ L  ++ A++VL+S         R  +R    +D  G
Sbjct: 606 TLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIG 665

Query: 776 V 776
           V
Sbjct: 666 V 666



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 222/495 (44%), Gaps = 40/495 (8%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH   V+ GF  D ++ + LI +YS+CG       VF  M   ++V +T +VSA  +NG
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E    + +   M   G  PNE  + S++  C        G  IH + LK+   ++ +   
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGEQIHGYMLKVMGSQSVYAST 272

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++FY++ GD   A+ VF ++ S +V  W +M+      G   +AL V S M+ EG+  
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQP 332

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++ F  AL  C  V    +GRQIH   I+ ++   I + NAL+ MY +S  +     V 
Sbjct: 333 NEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVL 389

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            ++ + D++SW        +N    +  +L  +    G  PN   FS  L  C  L  L 
Sbjct: 390 GKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLH 449

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G QL CLAL  G   +    ++LI M+ +CG +  A   FD +   ++ +WN L+ G  
Sbjct: 450 QGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLA 509

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +      L+TF  +  S    +  TF  V           +VG  H  ++K G +    
Sbjct: 510 QHGDANLALETFSEMCSSDWRPDDSTFLSV-----------LVGCNHAGLVKEGETF--- 555

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
                      F Q+ + +  +        + +  M+  L   G   EA+ +  ++    
Sbjct: 556 -----------FRQMTDRYGLTPTP-----SHYACMIDMLGRNGRFAEALRMIENM---P 596

Query: 545 EKPDEYILGTILNSC 559
            +PD  I  T+L SC
Sbjct: 597 FEPDVLIWKTLLASC 611



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 245/557 (43%), Gaps = 16/557 (2%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+ L    +    K G  G  L +FD M  +N+V+WT  +S   +NG  +    M+ DM 
Sbjct: 69  DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
            +G  PN+FA  + +  C + GA   G  +H  A++     + ++G  ++  Y++ G + 
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           AAE VF  + + DV  + +++      G    A++V+  M  +G+  +++T  + L  C 
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
                 IG QIHG +++     S+    ALID Y +      A  VFE +  K+V+SW +
Sbjct: 249 R----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCS 304

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +      +        +F + I  G +PN   FSI L  CG +    LG Q+ C A+   
Sbjct: 305 MMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRD 361

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
            + +  V+++L+ M+ R G V    +V   +   ++ +W   +S    N      +    
Sbjct: 362 LMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLL 421

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICS--SLIKSYV 494
            +   G   N   F   + +C          Q+H   +K G   C + +C+  +LI  Y 
Sbjct: 422 QMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLG---CDFKVCTGNALINMYS 478

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G++ ++    +  +  D+ SW +++  L   G  + A+  F  +  +  +PD+    +
Sbjct: 479 KCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLS 538

Query: 555 ILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFN 612
           +L  C   G  +  ++       + G        + +ID   + G    A RM  +  F 
Sbjct: 539 VLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFE 598

Query: 613 SNDVIVYNTLIMAYAHH 629
             DV+++ TL+ +   H
Sbjct: 599 P-DVLIWKTLLASCKLH 614



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 5/364 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R +G Q+HG+++K+  +  ++    LI  YS+ G FG    VF+ +  +N+VSW  ++  
Sbjct: 249 RGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQL 308

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            I++G  D  L+++ +M + G  PNEFA    +  C   G+   G  IHC A+K  +  +
Sbjct: 309 CIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTD 365

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++L+ Y + G V+  E V   I + D+  W A I      G+  +A+ ++  M  
Sbjct: 366 IRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHS 425

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG T + Y F + L  C+ +A    GRQ+H L ++   +  +   NALI+MY K   +  
Sbjct: 426 EGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGS 485

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+ M   DV+SWN+L  G +++ +       F +   S  RP+  TF  +L  C  
Sbjct: 486 ARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNH 545

Query: 360 LLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWN 417
              +  G    + +    G     +  + +I M  R G    A  + +N+ ++ ++  W 
Sbjct: 546 AGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWK 605

Query: 418 ELLS 421
            LL+
Sbjct: 606 TLLA 609



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G+      V  ++   +LVSWT  +SA  
Sbjct: 349 LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANF 408

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + + + M + GF PN++A  S +  C  +     G  +HC ALK+  +    
Sbjct: 409 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVC 468

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G A  G    AL   S M    
Sbjct: 469 TGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSD 528

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D  TF++ L GC+       G      +  R  +  + S    +IDM  ++     A
Sbjct: 529 WRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEA 588

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++ E M  + DV+ W TL      ++N
Sbjct: 589 LRMIENMPFEPDVLIWKTLLASCKLHRN 616


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  268 bits (685), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 277/575 (48%), Gaps = 2/575 (0%)

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMD 245
           L    K   +  A  +F  +   D   W  +I GY +     EAL + S M  +  + +D
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            +     L+ C L  ++  G  +HG  ++  +  S+ + +AL+DMY+K   +  + KVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            M  ++ ++W  +  G           + F     S    +   ++I L+       L+ 
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +    L  GF +   V +SL  M+ +CG ++     F  +   ++ +W  +++ Y  
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
              +   L+ F  +  S V  N  TF  V+  C      +   Q+H  ++  GF +   +
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSV 355

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            +S++  Y   G+L +  +     +  D+ +W  +++A    G+  EA      +   G 
Sbjct: 356 ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP 415

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KP+E+ L ++L+ C ++   ++ K +H  V+ +G      V SA+I  YAKCG I  A  
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F  S+  +D+I +  +I  YA HG   EA+E+F+ ++   L+P   TF+ V++ACSH G
Sbjct: 476 IFMDSWK-DDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           +VD G   F SM   Y + PS + YGC++D+L R G L DA+ +I  MP Q    V+ +L
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTL 594

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  CRIHG+ + G+ A+ ++L L P     H+ L+
Sbjct: 595 LRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLA 629



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/600 (23%), Positives = 267/600 (44%), Gaps = 31/600 (5%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           AK+     +L ++ L   ++ H     F+N  D+   NN + +  K  +      +FD++
Sbjct: 21  AKTNDNPRHLYTKPLSLTLNAH-----FSNKVDLAEANNQLKILVKTNHLKDARDLFDQL 75

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFG 164
            +R+ VSWT I+S  + + +    L+++  M+    +  + F +   +K C       +G
Sbjct: 76  PQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYG 135

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            ++H F++K  +  + FVG ++L+ Y K+G++  + +VF  + + +   W A+I G    
Sbjct: 136 TNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA 195

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           GY    L   S M    +  D Y +  AL+  +     + GR IH   ++   + +  + 
Sbjct: 196 GYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVA 255

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L  MY K   +DY    F +M   DV+SW T+   + +          F +   S   
Sbjct: 256 NSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVI 315

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN  TFS ++  C     L  G QL    L  GF++  +V +S++ ++ +CG +     V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++ +++I TW+ +++ Y       +  +    +   G + N      V+  C      
Sbjct: 376 FCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAIL 435

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +   Q+H  ++  G      +CS+LI  Y   G +  + +    + + D+ SW AM+S  
Sbjct: 436 EQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGY 495

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF---- 580
              GH+ EA+ +F ++ + G +PD      +L +C+           H  ++ LGF    
Sbjct: 496 AEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS-----------HAGMVDLGFYYFN 544

Query: 581 --NTEVYVASA------VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
             + + ++  +      +ID   + G +  A           D +V++TL+ A   HG V
Sbjct: 545 SMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDV 604



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 237/544 (43%), Gaps = 33/544 (6%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S LR DP  L+  L       + + GT +HG  VK G  N +F+ + L+ MY K G  G 
Sbjct: 110 SELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGR 169

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             +VFDEM  RN V+WT +++  ++ G  + GL  +  M  +    + +A    +K    
Sbjct: 170 SCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASAD 229

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            GA   G SIH   LK   ++N FV  S+   Y K G +      F  + + DV  W  +
Sbjct: 230 SGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTI 289

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +  Y   G     L     M    +  ++YTF   +  C+  A    G Q+H  ++    
Sbjct: 290 VTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             ++S+ N+++ +Y K   +    KVF  M  +D+I+W+T+   +S+     +      +
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G +PN    + +L  CG +  L+ G QL    L  G      V S+LI M+ +CG+
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGS 469

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A  +F +    +I +W  ++SGY  +    + ++ F NI + G+  +  TF  V+  
Sbjct: 470 IAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTA 529

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C            H  ++  GF    Y  +S+ K Y     +  S E            +
Sbjct: 530 CS-----------HAGMVDLGF----YYFNSMSKDY----HITPSKEH-----------Y 559

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G M+  L   G  H+A T+  S+     + D+ +  T+L +C   G     +     V+K
Sbjct: 560 GCMIDLLCRAGRLHDAETLIRSM---PIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLK 616

Query: 578 LGFN 581
           L  N
Sbjct: 617 LDPN 620



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 205/428 (47%), Gaps = 11/428 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   +K GF  + F+ N+L  MY+KCG   +GL  F +M   ++VSWT IV+A IQ
Sbjct: 236 GRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQ 295

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G+ D GL+ +  M+ +  +PNE+   +V+  C +    ++G  +H   L +       V
Sbjct: 296 MGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSV 355

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  Y+K G++A+  +VF S+   D+  W+ +I  Y+  GYG EA   +S M  EG 
Sbjct: 356 ANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGP 415

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +++   + L  C  +A  + G+Q+H  ++   +E +  + +ALI MY K   +  A K
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F      D+ISW  +  G++E+ +  +   LF      G RP+ VTF  +L  C     
Sbjct: 476 IFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGM 535

Query: 363 LDLGL-QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
           +DLG      ++        +     +I + CR G +  A ++  ++  + +   W+ LL
Sbjct: 536 VDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLL 595

Query: 421 SG-------YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
                     C     A+VLK   N   +G  +     F        + N +M+ +  G 
Sbjct: 596 RACRIHGDVDCGQRAAAEVLKLDPNC--AGTHITLANIFAAKGKWKEAANIRMLMKSKGV 653

Query: 474 IIKTGFSS 481
           + + G+SS
Sbjct: 654 VKEPGWSS 661


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 150/494 (30%), Positives = 262/494 (53%), Gaps = 16/494 (3%)

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M  ++++SW  +  G S+N    +    F    + G  P    FS  +R C  L  +++G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            Q+ CLAL  G   E  V S+L  M+ +CGA+  A  VF+ +  K+  +W  ++ GY   
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + L  F  + +  V ++       +  C   +  +    +H +++K GF S  ++ 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 487 SSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           ++L   Y   G ++++   F   +E  ++ S+  ++   V      + +++F  L   G 
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           +P+E+   +++ +CA   A ++   +H  V+K+ F+ + +V+S ++D Y KCG ++ A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
           AFD+  +  + I +N+L+  +  HGL  +A++IF++M    ++P+  TF+S+++ CSH G
Sbjct: 301 AFDEIGDPTE-IAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           LV++G   F SMD  YG+ P  + Y C++D+L R G L++AK  I  MPF+P+   + S 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNLL 771
           L  CRIHG+KE+G+ A+EKL+ L PKN  A VLLS               R R R+GN+ 
Sbjct: 420 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 479

Query: 772 DHEGVCNVNDGIKT 785
              G   V+ G KT
Sbjct: 480 KLPGYSWVDVGYKT 493



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 183/355 (51%), Gaps = 1/355 (0%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +RNLVSWT ++S   QN +F   ++ +  M+  G +P +FA  S ++ C S+G+ E G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             +HC ALK  I    FVG ++ + Y+K G +  A +VF  +   D   W AMI GY+  
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EAL     M+ E +T+D++   + L  C  +     GR +H  +++   E  I + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 285 NALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           NAL DMY K+  M+ A  VF   ++ ++V+S+  L  G+ E +   +  S+F +    G 
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            PN  TFS L++ C     L+ G QL    +   F ++  V+S L+ M+ +CG +E A  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            FD +       WN L+S +  +    D +K F  + + GV+ N  TF  ++  C
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGC 355



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 195/404 (48%), Gaps = 19/404 (4%)

Query: 27  RLCGN--NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN 84
           R+CG    QF   S +R              +L S  +G Q+H   +K G  +++F+ +N
Sbjct: 33  RICGEVPTQFAFSSAIRA-----------CASLGSIEMGKQMHCLALKFGIGSELFVGSN 81

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           L  MYSKCG      +VF+EM  ++ VSWT ++    + GEF+  L  +  M       +
Sbjct: 82  LEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTID 141

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           +  + S +  C ++ A +FG S+H   +K+  E + FVG ++ + Y+K GD+ +A  VF 
Sbjct: 142 QHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF- 200

Query: 205 SISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
            I S+  +V  +  +I GY       + L+V   +  +GI  +++TF + ++ C+  A  
Sbjct: 201 GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAAL 260

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           + G Q+H  +++   +    + + L+DMY K   ++ A + F+ + D   I+WN+L   F
Sbjct: 261 EQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVF 320

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDE 381
            ++        +F + +  G +PN +TF  LL  C     ++ GL     +    G +  
Sbjct: 321 GQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPG 380

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYC 424
           E   S +I +  R G ++ A    + + ++ N   W   L G C
Sbjct: 381 EEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GAC 423


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 284/576 (49%), Gaps = 6/576 (1%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYT 248
           YAKLGDVA A RVF  +   +   WNA+I G    G   EAL +   M+ +G + +D +T
Sbjct: 93  YAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFT 152

Query: 249 FINALQGCSLVADFDIGRQIHGL----IIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +   ++ C+ +     GR++  +    I       ++ +  AL+DM+ K   +D A  VF
Sbjct: 153 YPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVF 212

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E M  +D+ +W  + GG   + N  +   LF+     G   + +  + ++  CG+  +L 
Sbjct: 213 ESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQ 272

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G  L   A+  G   +  V+++L+ M+C+CG VEMA  +F + + K++ +W+ L+ GY 
Sbjct: 273 VGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYS 332

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      +  FC +   G+  N  T   ++      +  +   +IH   I+ G     +
Sbjct: 333 QNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEF 392

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + S+LI  Y   G +  +          D+A W +M++     G++  A      L + G
Sbjct: 393 VVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVG 452

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPD   + ++L  C       + K +H +VIK   N+   V +A++D Y KCG ++ A+
Sbjct: 453 LKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAK 512

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F Q     + + YN LI ++  H    +A+  FD MK   + P + TFV+++S CSH 
Sbjct: 513 EVF-QLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHA 571

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GL+DKG  L+ SM   Y + P  + Y C+VD+ SR G L++A   +  M  +P   V   
Sbjct: 572 GLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGG 631

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL+ CR+H   ++ E   +++    P +   H+LLS
Sbjct: 632 LLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLS 667



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 247/545 (45%), Gaps = 6/545 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++  G  +   L   L+  Y+K G     LRVFD M  RN  +W  ++   +  G
Sbjct: 69  RLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAG 128

Query: 125 EFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSI----HCFALKIRIEKN 179
            F   L+M+  M  +G +  + F    V+K C ++GA   G  +               N
Sbjct: 129 RFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPN 188

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FV C++++ +AK G +  A  VF S+   D+  W AMIGG  H G   E +++ + M  
Sbjct: 189 VFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRS 248

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG  +D       +  C    +  +G  +HG  ++S     I + NAL+DMY K   ++ 
Sbjct: 249 EGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEM 308

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F     KDV+SW++L  G+S+N     + SLF + I  G  PN  T + +L     
Sbjct: 309 ADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSV 368

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  +  G ++ C ++  G    E V S+LI ++ + G + +A ++F     K++  WN +
Sbjct: 369 LKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSM 428

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N            + + G++ +  T   V+  C +        ++H  +IK   
Sbjct: 429 VAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCI 488

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +S   + ++L+  Y   G L+ + E        +  ++  ++S+     H  +A++ F  
Sbjct: 489 NSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDL 548

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +   G  PD+     +L+ C+  G   +   + H  +     + E    S ++D Y++CG
Sbjct: 549 MKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCG 608

Query: 599 DIKGA 603
            +  A
Sbjct: 609 KLDEA 613



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 183/368 (49%), Gaps = 1/368 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A  +S         +GT +HG  VK G + DI++ N L+ MY KCG       +F
Sbjct: 254 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 313

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
                +++VSW+ ++    QNG  ++ + ++ +M + G  PN   + S++     +    
Sbjct: 314 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 373

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IHCF+++  +E++ FV  ++++ Y+K G +  AE +F+     D+  WN+M+ GYA
Sbjct: 374 SGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYA 433

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             GY   A   +  +   G+  D  T ++ L  C+       G+++H  +I+  +    S
Sbjct: 434 VNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCS 493

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+DMY K   ++ A +VF+ M +++ +++N L   F ++ +  Q  S F      G
Sbjct: 494 VNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG 553

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMFCRCGAVEMA 401
             P+ VTF  LL  C     +D GL L    LH      E+   S ++ ++ RCG ++ A
Sbjct: 554 IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 613

Query: 402 HSVFDNVS 409
                N++
Sbjct: 614 WCFMSNMA 621



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 233/486 (47%), Gaps = 10/486 (2%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  +    +L    + R +   V   I       ++F+Q  L+ M++KCG       VF+
Sbjct: 154 PPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFE 213

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M  R+L +WT ++   + +G +   + ++  M++ GF  +     +V+  C   G  + 
Sbjct: 214 SMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQV 273

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G ++H  A+K     + +V  ++++ Y K G V  A+ +F+S +S DV  W+++I GY+ 
Sbjct: 274 GTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQ 333

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G    ++++   M+  GI  +  T  + L   S++     G++IH   IR  +E S  +
Sbjct: 334 NGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFV 393

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL--- 340
           V+ALID+Y K   +  A  +F    DKD+  WN++  G++ N   G + S F    L   
Sbjct: 394 VSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN---GYSDSAFCALRLLQK 450

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+HVT   +L  C +   L  G +L    +        +V ++L+ M+C+CG +E+
Sbjct: 451 VGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEV 510

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A  VF  ++ +N  T+N L+S +  +  +   L  F  +   G+  +  TF  ++ +CC 
Sbjct: 511 AKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALL-SCCS 569

Query: 461 SEN--QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASW 517
                 + +   H  +     S      S ++  Y   G+LD ++ F SN AE  ++   
Sbjct: 570 HAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVL 629

Query: 518 GAMMSA 523
           G +++A
Sbjct: 630 GGLLAA 635



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 31  NNQFCSDSFLRK-----DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           ++ FC+   L+K     D + +   L L       + G ++H +++K    +   + N L
Sbjct: 439 DSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNAL 498

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           + MY KCG+      VF  M ERN V++ +++S+  ++   D  L  +  MK +G  P++
Sbjct: 499 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDK 558

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFAL---KIRIEKNPFVGCSVLNFYAKLGDVAAA 199
               +++  C   G  + G  ++   L    I  EK  +    +++ Y++ G +  A
Sbjct: 559 VTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY--SCIVDLYSRCGKLDEA 613



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +Q  + +H  V+  G      + + ++ AYAK GD+  A   FD     N    +N +I 
Sbjct: 64  FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS-FAWNAVIK 122

Query: 625 AYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG- 682
                G  SEA+E+F  M    ++     T+  V+ AC+  G V +G  +++ +++    
Sbjct: 123 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIAS 182

Query: 683 --MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
              +P+      LVDM ++ G L++A++V E M  +     + +++ G    GN
Sbjct: 183 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVR-DLAAWTAMIGGTVHSGN 235


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 173/621 (27%), Positives = 305/621 (49%), Gaps = 23/621 (3%)

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           C  L+   K G +  A  +F  +   +V  W   I G    G    A  + + ML  G+ 
Sbjct: 74  CKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVA 133

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            + +    AL  C+      +G Q+H L +R+       I + LI++Y +   +  A +V
Sbjct: 134 PNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEV 193

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F RM   DV+ + +L      N    +   +  +    G +PN  T + +L +C +    
Sbjct: 194 FRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR---- 249

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            +G Q+    L          +++LI  + R G    A +VF+N+  KN+ +W  ++   
Sbjct: 250 GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLC 309

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC---CRSENQQMVGQIHGAIIKTGFS 480
             +    D L+ F  +   GV+ N   F   +  C   C      +  QIH + IK    
Sbjct: 310 IRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVC------LGRQIHCSAIKRDLM 363

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   + ++L+  Y   G +          E  D+ SW A +SA    G + +AV +   +
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 423

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G  P++Y   + L+SCA +    + + +H   +KLG + +V   +A+I+ Y+KCG I
Sbjct: 424 HSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRI 483

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             AR+AFD   +++DV+ +N+LI   A HG  + A+E F +M  ++ +P  +TF+SV+  
Sbjct: 484 GSARLAFD-VMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVG 542

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           C+H GLV +G   F+ M  +YG+ P+P  Y C++DML RNG   +A  +IE MPF+P   
Sbjct: 543 CNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVL 602

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLD 772
           ++++LL+ C++H N ++G+ A++KL+ L  ++ A++VL+S         R  +R    +D
Sbjct: 603 IWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMD 662

Query: 773 HEGVCNVNDGIKTVDLKLELK 793
             GV   + G   +++K E++
Sbjct: 663 EIGV-KKDAGWSWIEVKNEVE 682



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 221/495 (44%), Gaps = 40/495 (8%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH   V+ GF  D ++ + LI +YS+CG       VF  M   ++V +T +VSA  +NG
Sbjct: 157 QVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNG 216

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           E    + +   M   G  PNE  + S++  C        G  IH + LK+   ++ +   
Sbjct: 217 ELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGEQIHGYMLKVMGSQSVYAST 272

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++FY++ GD   A+ VF ++ S +V  W +M+      G   +AL V S M+ EG+  
Sbjct: 273 ALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQP 332

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++ F  AL  C  V    +GRQIH   I+ ++   I + NAL+ MY +S  +     V 
Sbjct: 333 NEFAFSIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVL 389

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            ++ + D++SW        +N    +  +L  +    G  PN   FS  L  C  L  L 
Sbjct: 390 GKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLH 449

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G QL CLAL  G   +    ++LI M+ +CG +  A   FD +   ++ +WN L+ G  
Sbjct: 450 QGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLA 509

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +      L+TF  +  S    +  TF  V           +VG  H  ++K G      
Sbjct: 510 QHGDANLALETFSEMCSSDWRPDDSTFLSV-----------LVGCNHAGLVKEG------ 552

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
                      F Q+ + +  +        + +  M+  L   G   EA+ +  ++    
Sbjct: 553 --------ETFFRQMTDRYGLTPTP-----SHYACMIDMLGRNGRFAEALRMIENM---P 596

Query: 545 EKPDEYILGTILNSC 559
            +PD  I  T+L SC
Sbjct: 597 FEPDVLIWKTLLASC 611



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 133/557 (23%), Positives = 245/557 (43%), Gaps = 16/557 (2%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+ L    +    K G  G  L +FD M  +N+V+WT  +S   +NG  +    M+ DM 
Sbjct: 69  DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
            +G  PN+FA  + +  C + GA   G  +H  A++     + ++G  ++  Y++ G + 
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           AAE VF  + + DV  + +++      G    A++V+  M  +G+  +++T  + L  C 
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
                 IG QIHG +++     S+    ALID Y +      A  VFE +  K+V+SW +
Sbjct: 249 R----GIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCS 304

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +      +        +F + I  G +PN   FSI L  CG +    LG Q+ C A+   
Sbjct: 305 MMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVC---LGRQIHCSAIKRD 361

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
            + +  V+++L+ M+ R G V    +V   +   ++ +W   +S    N      +    
Sbjct: 362 LMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLL 421

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY-ICS--SLIKSYV 494
            +   G   N   F   + +C          Q+H   +K G   C + +C+  +LI  Y 
Sbjct: 422 QMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLG---CDFKVCTGNALINMYS 478

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G++ ++    +  +  D+ SW +++  L   G  + A+  F  +  +  +PD+    +
Sbjct: 479 KCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLS 538

Query: 555 ILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFN 612
           +L  C   G  +  ++       + G        + +ID   + G    A RM  +  F 
Sbjct: 539 VLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFE 598

Query: 613 SNDVIVYNTLIMAYAHH 629
             DV+++ TL+ +   H
Sbjct: 599 P-DVLIWKTLLASCKLH 614



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 5/364 (1%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA 119
           R +G Q+HG+++K+  +  ++    LI  YS+ G FG    VF+ +  +N+VSW  ++  
Sbjct: 249 RGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQL 308

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
            I++G  D  L+++ +M + G  PNEFA    +  C   G+   G  IHC A+K  +  +
Sbjct: 309 CIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTD 365

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             V  ++L+ Y + G V+  E V   I + D+  W A I      G+  +A+ ++  M  
Sbjct: 366 IRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHS 425

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG T + Y F + L  C+ +A    GRQ+H L ++   +  +   NALI+MY K   +  
Sbjct: 426 EGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGS 485

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+ M   DV+SWN+L  G +++ +       F +   S  RP+  TF  +L  C  
Sbjct: 486 ARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNH 545

Query: 360 LLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWN 417
              +  G    + +    G     +  + +I M  R G    A  + +N+ ++ ++  W 
Sbjct: 546 AGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWK 605

Query: 418 ELLS 421
            LL+
Sbjct: 606 TLLA 609



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G+      V  ++   +LVSWT  +SA  
Sbjct: 349 LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANF 408

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + + + M + GF PN++A  S +  C  +     G  +HC ALK+  +    
Sbjct: 409 QNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVC 468

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G A  G    AL   S M    
Sbjct: 469 TGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSD 528

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
              D  TF++ L GC+       G      +  R  +  + S    +IDM  ++     A
Sbjct: 529 WRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEA 588

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++ E M  + DV+ W TL      ++N
Sbjct: 589 LRMIENMPFEPDVLIWKTLLASCKLHRN 616


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/576 (28%), Positives = 284/576 (49%), Gaps = 6/576 (1%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYT 248
           YAKLGDVA A RVF  +   +   WNA+I G    G   EAL +   M+ +G + +D +T
Sbjct: 98  YAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFT 157

Query: 249 FINALQGCSLVADFDIGRQIHGL----IIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +   ++ C+ +     GR++  +    I       ++ +  AL+DM+ K   +D A  VF
Sbjct: 158 YPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVF 217

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E M  +D+ +W  + GG   + N  +   LF+     G   + +  + ++  CG+  +L 
Sbjct: 218 ESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQ 277

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G  L   A+  G   +  V+++L+ M+C+CG VEMA  +F + + K++ +W+ L+ GY 
Sbjct: 278 VGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYS 337

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      +  FC +   G+  N  T   ++      +  +   +IH   I+ G     +
Sbjct: 338 QNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEF 397

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + S+LI  Y   G +  +          D+A W +M++     G++  A      L + G
Sbjct: 398 VVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVG 457

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            KPD   + ++L  C       + K +H +VIK   N+   V +A++D Y KCG ++ A+
Sbjct: 458 LKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAK 517

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             F Q     + + YN LI ++  H    +A+  FD MK   + P + TFV+++S CSH 
Sbjct: 518 EVF-QLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHA 576

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           GL+DKG  L+ SM   Y + P  + Y C+VD+ SR G L++A   +  M  +P   V   
Sbjct: 577 GLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGG 636

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LL+ CR+H   ++ E   +++    P +   H+LLS
Sbjct: 637 LLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLS 672



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 247/545 (45%), Gaps = 6/545 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++  G  +   L   L+  Y+K G     LRVFD M  RN  +W  ++   +  G
Sbjct: 74  RLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAG 133

Query: 125 EFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSI----HCFALKIRIEKN 179
            F   L+M+  M  +G +  + F    V+K C ++GA   G  +               N
Sbjct: 134 RFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPN 193

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            FV C++++ +AK G +  A  VF S+   D+  W AMIGG  H G   E +++ + M  
Sbjct: 194 VFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRS 253

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           EG  +D       +  C    +  +G  +HG  ++S     I + NAL+DMY K   ++ 
Sbjct: 254 EGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEM 313

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F     KDV+SW++L  G+S+N     + SLF + I  G  PN  T + +L     
Sbjct: 314 ADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSV 373

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  +  G ++ C ++  G    E V S+LI ++ + G + +A ++F     K++  WN +
Sbjct: 374 LKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSM 433

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++GY  N            + + G++ +  T   V+  C +        ++H  +IK   
Sbjct: 434 VAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCI 493

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +S   + ++L+  Y   G L+ + E        +  ++  ++S+     H  +A++ F  
Sbjct: 494 NSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDL 553

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +   G  PD+     +L+ C+  G   +   + H  +     + E    S ++D Y++CG
Sbjct: 554 MKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCG 613

Query: 599 DIKGA 603
            +  A
Sbjct: 614 KLDEA 618



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 183/368 (49%), Gaps = 1/368 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A  +S         +GT +HG  VK G + DI++ N L+ MY KCG       +F
Sbjct: 259 DSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLF 318

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
                +++VSW+ ++    QNG  ++ + ++ +M + G  PN   + S++     +    
Sbjct: 319 WSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIR 378

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IHCF+++  +E++ FV  ++++ Y+K G +  AE +F+     D+  WN+M+ GYA
Sbjct: 379 SGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYA 438

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             GY   A   +  +   G+  D  T ++ L  C+       G+++H  +I+  +    S
Sbjct: 439 VNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCS 498

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+DMY K   ++ A +VF+ M +++ +++N L   F ++ +  Q  S F      G
Sbjct: 499 VNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG 558

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMFCRCGAVEMA 401
             P+ VTF  LL  C     +D GL L    LH      E+   S ++ ++ RCG ++ A
Sbjct: 559 IAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 618

Query: 402 HSVFDNVS 409
                N++
Sbjct: 619 WCFMSNMA 626



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 10/177 (5%)

Query: 31  NNQFCSDSFLRK-----DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNL 85
           ++ FC+   L+K     D + +   L L       + G ++H +++K    +   + N L
Sbjct: 444 DSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNAL 503

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNE 145
           + MY KCG+      VF  M ERN V++ +++S+  ++   D  L  +  MK +G  P++
Sbjct: 504 LDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDK 563

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFAL---KIRIEKNPFVGCSVLNFYAKLGDVAAA 199
               +++  C   G  + G  ++   L    I  EK  +    +++ Y++ G +  A
Sbjct: 564 VTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY--SCIVDLYSRCGKLDEA 618



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 6/174 (3%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +Q  + +H  V+  G      + + ++ AYAK GD+  A   FD     N    +N +I 
Sbjct: 69  FQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNS-FAWNAVIK 127

Query: 625 AYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG- 682
                G  SEA+E+F  M    ++     T+  V+ AC+  G V +G  +++ +++    
Sbjct: 128 GLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIAS 187

Query: 683 --MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
              +P+      LVDM ++ G L++A++V E M  +     + +++ G    GN
Sbjct: 188 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVR-DLAAWTAMIGGTVHSGN 240


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 174/701 (24%), Positives = 342/701 (48%), Gaps = 6/701 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           TQ+H H+V     N+      L+  YS+ G       VF      +   +++++   + N
Sbjct: 18  TQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWN 77

Query: 124 GEFDMGLKMY---VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             F   L ++   + M +       F   SV++    +G    G  +H   LK    ++ 
Sbjct: 78  HLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDR 137

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +G S++  Y +L  +  A++VF  +   D+  W+++I  Y   G   E L +  SM+ E
Sbjct: 138 VIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICE 197

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D    ++  + C  +    + + +HG ++R  +    S+ N+LI MY +   +  A
Sbjct: 198 GIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRA 257

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++FE + D+    W ++   +++N+   +   +F K   S   PN VT   +L  C +L
Sbjct: 258 KRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARL 317

Query: 361 LDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             L  G  + C  L     +   ++  +LI  +  C  +     +  ++  +NI +WN L
Sbjct: 318 GRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTL 377

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y     + + +  F  +   G+  +  +    +     S + Q   QIHG ++K GF
Sbjct: 378 ISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF 437

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               ++ +SL+  Y   G   +++   N  +   + +W  M+      G + EA+++F  
Sbjct: 438 FD-EFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDE 496

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + +   + ++    + + +C+ +G   + K IH  +I  G   ++Y+ +A++D YAKCGD
Sbjct: 497 MFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGD 556

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           ++ A+  FD S     V+ ++T+I A+  HG ++ A  +F KM L+N++P++ TF++++S
Sbjct: 557 LQTAQKVFD-SIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILS 615

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H G V +G   F +M   YG+ P+ + +  +VD+LSR G +  A  +I+ +    + 
Sbjct: 616 ACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAA 675

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +++ +LL+GCRI+G  ++ E+ +E+L  +   +   + LLS
Sbjct: 676 SIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLS 716



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/602 (25%), Positives = 283/602 (47%), Gaps = 8/602 (1%)

Query: 7   AFLFADKPSCHF--HATRKRIHRLCGNNQFCSDSFLRKDPIFLAKS-LSLSENLKSRVLG 63
           +F+F+    CH   H  R+ +     N+     S L ++  FL  S +     +   ++G
Sbjct: 64  SFMFSVLIKCHLWNHLFREVLSLF--NHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVG 121

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
            ++HG I+K GF  D  +  +L+ MY +  +     +VFDEM  R+LV W+ I+S  ++N
Sbjct: 122 RKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVEN 181

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G +  GL+M+  M   G  P+   + SV + C  +G      S+H + ++  +  +  + 
Sbjct: 182 GVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLS 241

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            S++  Y++ G +  A+R+F  I      CW +MI  Y       EAL+V   M    + 
Sbjct: 242 NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVE 301

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFK 302
            +  T I+ L  C+ +     G+ +H  ++R+ +  + + +  ALID Y     M    K
Sbjct: 302 PNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEK 361

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +   + +++++SWNTL   ++      +  + F   +  G  P+  + +  +        
Sbjct: 362 LLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGS 421

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           +  G Q+    +  GF D E V +SL+ M+ +CG    A+++F+ + +K+I  WN ++ G
Sbjct: 422 IQFGQQIHGHVMKRGFFD-EFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICG 480

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           +  N    + L  F  ++++ +E+N  TF   ++ C           IH  II TG  + 
Sbjct: 481 FSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQND 540

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            YI ++L+  Y   G L  + +  +      + SW  M++A    G  + A ++FH +V 
Sbjct: 541 LYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVL 600

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTK-SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           +  KP+E     IL++C   G+ +  K   +      G    V   ++++D  ++ GDI 
Sbjct: 601 SNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDIN 660

Query: 602 GA 603
           GA
Sbjct: 661 GA 662



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 185/390 (47%), Gaps = 6/390 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK--LGFTNDIFLQNNLIAMYSKCGY 94
           DS +  + + +   L+    L     G  VH  +++  +G T  + L   LI  YS C  
Sbjct: 297 DSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTG-LDLGPALIDFYSACWK 355

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
                ++   +   N+VSW  ++S   + G  D  +  +  M   G MP+ F++ S +  
Sbjct: 356 MSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISA 415

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
             S G+ +FG  IH   +K R   + FV  S+++ Y+K G  ++A  +F  I    +  W
Sbjct: 416 SASSGSIQFGQQIHGHVMK-RGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAW 474

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N MI G++  G   EAL++   M    + ++K TF++A+Q CS +   D G+ IH  II 
Sbjct: 475 NCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIV 534

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           +  +  + I  AL+DMY K   +  A KVF+ + +K V+SW+T+      +       SL
Sbjct: 535 TGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSL 594

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFC 393
           FHK +LS  +PN VTF  +L  C     +  G      +  + G +      +S++ +  
Sbjct: 595 FHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLS 654

Query: 394 RCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
           R G +  A+ +  ++      + W  LL+G
Sbjct: 655 RAGDINGAYEIIKSIRTPVAASIWGALLNG 684


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 252/478 (52%), Gaps = 3/478 (0%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N LID+Y K    D A  VF  +  K+V SW  +   F+EN++  +    F   +L G  
Sbjct: 14  NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P  V  SI L  C    ++ +G  +Q   L  G  +E  V ++L+ ++ + G    A SV
Sbjct: 74  PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASV 133

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +S++++  W+ +++ Y  N    + L  F  +   GV  N  T    ++ C    + 
Sbjct: 134 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 193

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +    +H  +   G  S   + ++L+  Y   G+++ + E        ++ +W A+ +A 
Sbjct: 194 RSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAY 253

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP--FVIKLGFNT 582
                N +A+ + H +   G  P+     ++L++CAAI A ++ + IH    V+  G  +
Sbjct: 254 ARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLES 313

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
           +VYV +A+++ Y+KCG++  A   FD+     D++++N+LI   A HG   +A+E+F++M
Sbjct: 314 DVYVLTALVNMYSKCGNLALAGNMFDK-IAHLDLVLWNSLIATNAQHGQTEKALELFERM 372

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           +L  LQP+  TF SV+ ACSH G++D+G   F S    +G+ P  + +GC+VD+L R G+
Sbjct: 373 RLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGW 432

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + D++ ++  MPF+P P  + + L  CR + N +   WA+E L  L P+  A +VLLS
Sbjct: 433 IVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYVLLS 490



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 189/389 (48%), Gaps = 2/389 (0%)

Query: 72  KLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
           +LG+  + FL N LI +Y+KC  F   L VF  +  +N+ SWT++++A  +N +FD    
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
            +  M   G  P E  +   +  C        G SI    L   IE+   V  ++++ Y 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           KLG    A  VF  +S  DV  W+AM+  YA  G+  EAL +   M  +G+  +K T ++
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C+ + D   G  +H  +    ++  + +  AL+++Y K   ++ A + F ++ +K+
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-- 369
           V++W+ +   ++ N        + H+  L G  PN  TF  +L  C  +  L  G ++  
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
           +   L  G   +  V ++L+ M+ +CG + +A ++FD +++ ++  WN L++    +   
Sbjct: 303 RIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQT 362

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETC 458
              L+ F  +   G++    TF  V+  C
Sbjct: 363 EKALELFERMRLEGLQPTIITFTSVLFAC 391



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   + +   +G  +   I+  G   +  +Q  L+++Y K G+      VF  M+ R++
Sbjct: 83  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRDV 142

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+W+ +V+A  +NG     L ++  M  +G  PN+  + S +  C S+G    G  +H  
Sbjct: 143 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 202

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                I+    VG +++N Y K G + AA   F  I   +V  W+A+   YA      +A
Sbjct: 203 VEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDA 262

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI--IRSEVECSISIVNALI 288
           + V+  M  EG+  +  TF++ L  C+ +A    GR+IH  I  +   +E  + ++ AL+
Sbjct: 263 IRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALV 322

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY K   +  A  +F+++A  D++ WN+L    +++    +   LF +  L G +P  +
Sbjct: 323 NMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 382

Query: 349 TFSILLRQCGKLLDLDLG 366
           TF+ +L  C     LD G
Sbjct: 383 TFTSVLFACSHAGMLDQG 400



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 2/207 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +   G  + + +   L+ +Y KCG        F ++ E+N+V+W+ I +A  +
Sbjct: 196 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYAR 255

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH--CFALKIRIEKNP 180
           N      +++   M   G  PN     SV+  C ++ A + G  IH     L   +E + 
Sbjct: 256 NDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDV 315

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  +++N Y+K G++A A  +F  I+  D+  WN++I   A  G   +AL +   M  E
Sbjct: 316 YVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 375

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQ 267
           G+     TF + L  CS     D GR+
Sbjct: 376 GLQPTIITFTSVLFACSHAGMLDQGRK 402



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 2/229 (0%)

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+    ++C+ LI  Y    + D++    +G +  ++ SW  M++A             F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             ++  G  P E  +   L++C         +SI   ++  G   E  V +A++  Y K 
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL 124

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G    A   F +  +  DV+ ++ ++ AYA +G   EA+ +F +M L  + P++ T VS 
Sbjct: 125 GHCTDAASVFLR-MSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSG 183

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           + AC+  G +  G L+ + +++Q G+Q        LV++  + G +E A
Sbjct: 184 LDACASLGDLRSGALMHQRVEAQ-GIQSGVVVGTALVNLYGKCGRIEAA 231


>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 164/537 (30%), Positives = 275/537 (51%), Gaps = 15/537 (2%)

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           H L I+S    SI   N +I  Y K   +  A K+F   + +D +SWNT+  GF    N 
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                        G   +  +F  +L+    +  +++G Q+  + +  G+       S+L
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVN 447
           + M+ +C  VE A  VF +++ +N  TWN L+SGY     D        +  E  GVE++
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA-QVGDRGTAFWLLDCMELEGVEID 200

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             TF  ++      +  ++  Q+H  I+K G +S   +C+++I +Y   G ++++    +
Sbjct: 201 DGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFD 260

Query: 508 GA---ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
           GA     LD  SW ++++     G + +A+  F ++       D Y    +L SC+ +  
Sbjct: 261 GAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLAT 320

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            Q  + +H  V+K GF    +VAS++I  Y+KCG I+ AR +FD +   +  I +N+LI 
Sbjct: 321 LQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDAT-PKDSSIAWNSLIF 379

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            YA HG    A+++F  MK   ++    TFV+V++ACSH GLV++G    KSM+S YG+ 
Sbjct: 380 GYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIP 439

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
           P  + Y C++D+L R G L++AK +IE MPF+P   V+++LL  CR  G+ EL    +  
Sbjct: 440 PRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASH 499

Query: 745 LLLLLPKNDAAHVLLS------KRKRQREG--NLLDHEGVCNVNDGIKTVDLKLELK 793
           LL L P+    +VLLS      +R  ++     L+   GV  V  G   +++K E++
Sbjct: 500 LLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKV-PGWSWIEVKNEVR 555



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 232/512 (45%), Gaps = 38/512 (7%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGL 130
           +K G T  I+  NN+I+ Y+KCG      ++F E ++R+ VSW  +++  +  G F+  L
Sbjct: 26  IKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETAL 85

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           +    MK  GF  + ++ GS++K    +G  E G  +H   +K+  E N F G ++L+ Y
Sbjct: 86  EFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY 145

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           AK   V  A  VF SI+  +   WNA+I GYA  G    A  ++  M  EG+ +D  TF 
Sbjct: 146 AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFA 205

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE---RM 307
             L          +  Q+H  I++  +    ++ NA+I  Y +   ++ A +VF+     
Sbjct: 206 PLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIET 265

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            D D +SWN++  GFS++         F          +H  FS +LR C  L  L LG 
Sbjct: 266 RDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 325

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           Q+  L L  GF     V SSLI+M+ +CG +E A   FD     +   WN L+ GY  + 
Sbjct: 326 QVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHG 385

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                L  F  + +  V+++  TF  V+  C            H  +++ G+        
Sbjct: 386 RGKIALDLFFLMKDRRVKLDHITFVAVLTACS-----------HIGLVEEGW-------- 426

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-K 546
           S +KS      +++ +          M  +  M+  L   G   EA     +L+EA   +
Sbjct: 427 SFLKS------MESDYGIPP-----RMEHYACMIDLLGRAGRLDEA----KALIEAMPFE 471

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           PD  +  T+L +C   G  +    +   +++L
Sbjct: 472 PDAMVWKTLLGACRTCGDIELASQVASHLLEL 503



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 182/378 (48%), Gaps = 10/378 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVH  +VK+G+  ++F  + L+ MY+KC        VF  +  RN V+W  ++S   
Sbjct: 118 VGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYA 177

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+      +   M+  G   ++     ++ +       +    +H   +K  +  +  
Sbjct: 178 QVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTT 237

Query: 182 VGCSVLNFYAKLGDVAAAERVFY-SISSDDVG--CWNAMIGGYAHCGYGFEALNVVSSML 238
           V  +++  Y++ G +  AERVF  +I + D+    WN+++ G++  G   +AL    +M 
Sbjct: 238 VCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMR 297

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            + + +D Y F   L+ CS +A   +G+Q+H L+++S  E +  + ++LI MY K   ++
Sbjct: 298 SQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIE 357

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP--NHVTFSILLRQ 356
            A K F+       I+WN+L  G++++        LF  F++   R   +H+TF  +L  
Sbjct: 358 DARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLF--FLMKDRRVKLDHITFVAVLTA 415

Query: 357 CGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NIT 414
           C  +  ++ G   L+ +    G        + +I +  R G ++ A ++ + + ++ +  
Sbjct: 416 CSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAM 475

Query: 415 TWNELLSGYCFNCCDADV 432
            W  LL G C  C D ++
Sbjct: 476 VWKTLL-GACRTCGDIEL 492



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 3/183 (1%)

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           S ++  A  R    H   IK G    +Y A+ +I  YAKCG+I+ A   F ++ +  D +
Sbjct: 8   SQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGET-SQRDAV 66

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +NT+I  + + G    A+E    MK         +F S++   +  G V+ G  +  SM
Sbjct: 67  SWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQV-HSM 125

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
             + G + +      L+DM ++   +EDA  V + +  + S T + +L+SG    G++  
Sbjct: 126 MVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVT-WNALISGYAQVGDRGT 184

Query: 738 GEW 740
             W
Sbjct: 185 AFW 187


>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
 gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
 gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 737

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 187/679 (27%), Positives = 336/679 (49%), Gaps = 50/679 (7%)

Query: 117 VSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++   ++GE    LK++ D+ +     P++++V   +     +  + FG  +HC+A++  
Sbjct: 28  LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--------------------------- 208
           +  +  V  ++L+ Y +LG++A+ ++ F  I                             
Sbjct: 88  LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147

Query: 209 -----DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
                DDV  WNAMI G    GY   ++ +   M   G+  DK+ F   L  C      D
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLD 206

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGG 321
            G+Q+H L+I++    + S+VNALI MY     +  A  VFE   +A +D +++N +  G
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
            +  K   ++  +F K + +  RP  +TF  ++  C       +G Q+  LA+  G+   
Sbjct: 267 LAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKY 322

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V+++ + M+        AH VF+++  K++ TWN ++S Y         +  +  +  
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV+ +  TF  ++ T    +  +MV      IIK G SS   I ++LI +Y   GQ++ 
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMV---QACIIKFGLSSKIEISNALISAYSKNGQIEK 439

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK--PDEYILGTILNSC 559
           +      + R ++ SW A++S   H G   E +  F  L+E+  +  PD Y L T+L+ C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
            +  +       H +V++ G   E  + +A+I+ Y++CG I+ +   F+Q  +  DV+ +
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ-MSEKDVVSW 558

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           N+LI AY+ HG    A+  +  M+    + P  ATF +V+SACSH GLV++G  +F SM 
Sbjct: 559 NSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV 618

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI--MPFQPSPTVYRSLLSGCRIHGNKE 736
             +G+  + D + CLVD+L R G+L++A+ +++I          V+ +L S C  HG+ +
Sbjct: 619 EFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK 678

Query: 737 LGEWASEKLLLLLPKNDAA 755
           LG+  + KLL+   K+D +
Sbjct: 679 LGKMVA-KLLMEKEKDDPS 696



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 153/638 (23%), Positives = 286/638 (44%), Gaps = 62/638 (9%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG------ 93
           LR D   ++ +++ + +L+  + G QVH + ++ G      + N L+++Y + G      
Sbjct: 53  LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK 112

Query: 94  ----------YFGW---------------GLRVFDEMAERNLVS-WTLIVSAAIQNGEFD 127
                      + W                  VFD+M ER+ V+ W  +++   ++G  +
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHE 172

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
             ++++ +M   G   ++F   +++ +C   G+ +FG  +H   +K       F+  SV+
Sbjct: 173 TSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGF----FIASSVV 227

Query: 188 N----FYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGF---EALNVVSSML 238
           N     Y     V  A  VF    ++  D   +N +I G A    GF   E+L V   ML
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA----GFKRDESLLVFRKML 283

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
              +     TF++ +  CS  A   +G Q+HGL I++  E    + NA + MY       
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A KVFE + +KD+++WNT+   +++ K      S++ +  + G +P+  TF  LL    
Sbjct: 341 AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS- 399

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
             LDLD+   +Q   +  G   +  ++++LI  + + G +E A  +F+    KN+ +WN 
Sbjct: 400 --LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           ++SG+  N    + L+ F  + ES V +  +  T   ++  C  + +  +  Q H  +++
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G      I ++LI  Y   G + NS E  N     D+ SW +++SA    G    AV  
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577

Query: 537 FHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAY 594
           + ++ + G+  PD      +L++C+  G  +    I   +++  G    V   S ++D  
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637

Query: 595 AKCGDIKGAR--MAFDQSFNSNDVIVYNTLIMAYAHHG 630
            + G +  A   +   +    + V V+  L  A A HG
Sbjct: 638 GRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 242/557 (43%), Gaps = 34/557 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D    A  LS+  +  S   G QVH  ++K GF     + N LI MY  C       
Sbjct: 186 VRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDAC 244

Query: 100 RVFDE--MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            VF+E  +A R+ V++ +++   +   + D  L ++  M      P +    SVM  C  
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC-- 301

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
              +  G+ +H  A+K   EK   V  + +  Y+   D  AA +VF S+   D+  WN M
Sbjct: 302 -SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTM 360

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  Y     G  A++V   M   G+  D++TF  +L   SL  D D+   +   II+  +
Sbjct: 361 ISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATSL--DLDVLEMVQACIIKFGL 417

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              I I NALI  Y K+  ++ A  +FER   K++ISWN +  GF  N  P +    F  
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477

Query: 338 FILSGSR--PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            + S  R  P+  T S LL  C     L LG Q     L  G   E  + ++LI M+ +C
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYV 454
           G ++ +  VF+ +S K++ +WN L+S Y  +    + + T+  + + G V  +  TF  V
Sbjct: 538 GTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAV 597

Query: 455 VETCCRS-------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
           +  C  +       E    + + HG I      SC      L+      G LD +     
Sbjct: 598 LSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC------LVDLLGRAGHLDEAESLVK 651

Query: 508 GAE-----RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +E     R+D+  W A+ SA    G       +   L+E  EK D  +   + N  A  
Sbjct: 652 ISEKTIGSRVDV--WWALFSACAAHGDLKLGKMVAKLLMEK-EKDDPSVYVQLSNIYAGA 708

Query: 563 GAYQRTKSIHPFVIKLG 579
           G ++  +     +  +G
Sbjct: 709 GMWKEAEETRRAINMIG 725


>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
          Length = 805

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 174/712 (24%), Positives = 335/712 (47%), Gaps = 17/712 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  ++ LG   D+ L + ++  Y+  G        F      +L  W  ++    + G
Sbjct: 64  KLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNNDLAEWNSVMVDIFRAG 123

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +  + +Y  +K      +E  V   +K C+ +     G  +H  ++K+ + ++ FVG 
Sbjct: 124 YPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKGMHADSVKLGLSRDKFVGS 183

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC--GYGFEALNVVSSMLFEGI 242
           S++  Y+KL  +  +++ F  I   D+  + +MI GY+       + A  +VS M +  +
Sbjct: 184 SLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSENMDSTSWNAFKIVSDMSWSNL 243

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAF 301
            +++ T ++ LQ    +     G+ +H   IR ++  S  ++  +L+ MY++      A 
Sbjct: 244 EVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGACQLAS 303

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLF------HKFILSGSRPNHVTFSILLR 355
            V +  A + V SWN +  G       G            HK +     P+ VT++ ++ 
Sbjct: 304 AVLKNSA-QSVASWNAMLAGLVRTGQSGNAIHYLYIMLYEHKVV-----PDSVTYANVIS 357

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C +L +      +    +      +  + ++LI ++ +C  + ++  +F+ +  K+  +
Sbjct: 358 ACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQLVVKDTVS 417

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           +N ++ GY  N    + +     +    V  N  T   ++      ++      IHG  I
Sbjct: 418 YNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARGRWIHGFSI 477

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           + GF S   I + +I+ Y   G++ ++       E  ++ SW  MM   +  GH  + V 
Sbjct: 478 RHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVE 537

Query: 536 IFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
           +F  L++  + KPD   + T + + +  G  +  K +H FV +     +    +++I AY
Sbjct: 538 LFQLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAY 597

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
           AKCG +  +   F  S    D+  +N++I AY  HG  ++ +E+F  M+  N+ P   TF
Sbjct: 598 AKCGRLDLSVSLF-LSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEGNINPDGLTF 656

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
            SV+SACSH GL+ +G  +F+SM S Y ++P  + YGC VD++SR G+LE+    I++  
Sbjct: 657 SSVLSACSHAGLIKEGLHIFQSMTSMYSVRPQEEHYGCFVDLMSRAGHLEEGYKFIKLST 716

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQR 766
                +V  +LLS CR +GN  LG+  S +LL +  +N   + L+S+   Q+
Sbjct: 717 LNDKSSVLCALLSACRTYGNTMLGQVISNELLEVGQQNPGTYALISEVFAQK 768



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/523 (23%), Positives = 244/523 (46%), Gaps = 8/523 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L++ +LG  +H   VKLG + D F+ ++L+ +YSK        + F+E+ ++++VS+T +
Sbjct: 157 LRNLLLGKGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSM 216

Query: 117 VSAAIQNGEFDM--GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           ++   +N +       K+  DM  +    N   + S+++V  ++GA   G S+HC++++ 
Sbjct: 217 ITGYSENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRR 276

Query: 175 RIE-KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
            I   +  +  S+++ Y + G    A  V  + S+  V  WNAM+ G    G    A++ 
Sbjct: 277 DIGISDEVLETSLVHMYMQCGACQLASAVLKN-SAQSVASWNAMLAGLVRTGQSGNAIHY 335

Query: 234 VSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +  ML+E  +  D  T+ N +  C+ + +      +H  IIR  +   + +  ALI +Y+
Sbjct: 336 LYIMLYEHKVVPDSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYL 395

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K + +  + ++F ++  KD +S+N +  G+ +N    +  +L  + +     PN VT   
Sbjct: 396 KCTRITISKRLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILS 455

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           LL       D   G  +   ++  GF    ++ + +I M+  CG +  A  VF +   KN
Sbjct: 456 LLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKN 515

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           + +W  ++ G  F       ++ F  + +    + +       ++      + + V Q+H
Sbjct: 516 LISWTTMMMGCLFCGHGGQTVELFQLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVH 575

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             + +          +SLI +Y   G+LD S       E  D+ SW +M+SA    G   
Sbjct: 576 CFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYT 635

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
           + + +F  + E    PD     ++L++C+  G  +  + +H F
Sbjct: 636 KVLEMFKLMEEGNINPDGLTFSSVLSACSHAGLIK--EGLHIF 676



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 139/316 (43%), Gaps = 1/316 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  A  +S    L +      VH +I++     D+ L   LI +Y KC       R+F
Sbjct: 348 DSVTYANVISACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLF 407

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           +++  ++ VS+  ++   +QNG  +  + +  +M T    PN   + S++          
Sbjct: 408 NQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFA 467

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH F+++     N  +   ++  Y+  G +A+A  VF S  + ++  W  M+ G  
Sbjct: 468 RGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMMGCL 527

Query: 223 HCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
            CG+G + + +   ++ +     D    + A+Q  S        +Q+H  + R+ +E   
Sbjct: 528 FCGHGGQTVELFQLLMQQHDNKPDSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDT 587

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
             +N+LI  Y K   +D +  +F  +  +D+ SWN++   +  +    +   +F      
Sbjct: 588 KTMNSLITAYAKCGRLDLSVSLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEEG 647

Query: 342 GSRPNHVTFSILLRQC 357
              P+ +TFS +L  C
Sbjct: 648 NINPDGLTFSSVLSAC 663


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/644 (26%), Positives = 309/644 (47%), Gaps = 30/644 (4%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR----------IEKN 179
           + ++ D+  +   PN F +   ++   +        S + F L++           +++ 
Sbjct: 33  ITIFRDLLRSSLTPNHFTMSIFLQATTT--------SFNSFKLQVEQVQTHLTKSGLDRF 84

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            +V  S+LN Y K G V +A+ +F  +   D   WNA+I GY+  GY  +A  +   ML 
Sbjct: 85  VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G +    T +N L  C        GR +HG+  +S +E    + NALI  Y K + +  
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F  M DK  +SWNT+ G +S++    +  ++F          + VT          
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII-------N 257

Query: 360 LLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           LL   +  + L CL + CG +++ +V +SL+  + RCG +  A  ++ +    +I     
Sbjct: 258 LLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317

Query: 419 LLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           ++S Y     D D+ +  F    +  ++++      ++  C +S +  +   +HG  IK+
Sbjct: 318 IVSCYAEKG-DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G  +   + + LI  Y  F  ++         +   + SW +++S  V  G    A  +F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436

Query: 538 HSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           H + +  G  PD   + ++L  C+ +      K +H + ++  F  E +V +A+ID YAK
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
           CG+   A   F +S  +     +N++I  Y+  GL   A+  + +M+   L+P + TF+ 
Sbjct: 497 CGNEVQAESVF-KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLG 555

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SAC+H G VD+G + F++M  ++G+ P+   Y  +V +L R     +A ++I  M  +
Sbjct: 556 VLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIK 615

Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P   V+ +LLS C IH   E+GE+ + K+ +L  KN   +VL+S
Sbjct: 616 PDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMS 659



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/516 (22%), Positives = 232/516 (44%), Gaps = 9/516 (1%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           IFL  + +   + K +V   QV  H+ K G    ++++ +L+ +Y K G       +FDE
Sbjct: 53  IFLQATTTSFNSFKLQV--EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDE 110

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M ER+ V W  ++    +NG      K+++ M   GF P+   + +++  C   G    G
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+H  A K  +E +  V  ++++FY+K  ++ +AE +F  +       WN MIG Y+  
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   EA+ V  +M  + + +   T IN      L++       +H L+++  +   IS+V
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIIN------LLSAHVSHEPLHCLVVKCGMVNDISVV 284

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            +L+  Y +   +  A +++       ++   ++   ++E  +       F K      +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            + V    +L  C K   +D+G+ L   A+  G   +  V + LI M+ +   VE    +
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSEN 463
           F+ +    + +WN ++SG   +   +   + F  +    G+  +  T   ++  C +   
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
             +  ++HG  ++  F +  ++C++LI  Y   G    +       +    A+W +M+S 
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
               G  H A++ +  + E G KPDE     +L++C
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 53/116 (45%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D I +A  L+    L    LG ++HG+ ++  F N+ F+   LI MY+KCG      
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
            VF  +      +W  ++S    +G     L  Y++M+  G  P+E     V+  C
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 268/527 (50%), Gaps = 5/527 (0%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T  + +Q  +   + + G+Q+H ++IR     +  + N  +++Y K   +DY  K+F
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M+ ++++SW ++  GF+ N    +  S F +  + G        S +L+ C  L  + 
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+ CL + CGF  E  V S+L  M+ +CG +  A   F+ +  K+   W  ++ G+ 
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      L  +  +    V ++       +  C   +       +H  I+K GF    +
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313

Query: 485 ICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           I ++L   Y   G +   S  F   ++ + + S  A++   V      +A++ F  L   
Sbjct: 314 IGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRR 373

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G +P+E+   +++ +CA     +    +H  V+K  F  + +V+S ++D Y KCG    +
Sbjct: 374 GIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHS 433

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD+  N  D I +NTL+  ++ HGL   A+E F+ M    L+P+  TFV+++  CSH
Sbjct: 434 IQLFDEIENP-DEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH 492

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G+V+ G   F SM+  YG+ P  + Y C++D+L R G L++A+  I  MPF+P+   + 
Sbjct: 493 AGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWC 552

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK---RKRQRE 767
           S L  C+IHG+ E  ++A++KL+ L P+N  AHVLLS    +++Q E
Sbjct: 553 SFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWE 599



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 202/397 (50%), Gaps = 1/397 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  +++ G   + FL N+ + +YSKCG   + +++FD+M++RN+VSWT I++    
Sbjct: 94  GKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAH 153

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N  F   L  +  M+  G +  +FA+ SV++ C S+GA +FG  +HC  +K       FV
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++ + Y+K G+++ A + F  +   D   W +MI G+   G   +AL     M+ + +
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D++   + L  CS +     G+ +H  I++   E    I NAL DMY KS  M  A  
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 303 VFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           VF+  +D   ++S   +  G+ E     +  S F      G  PN  TF+ L++ C    
Sbjct: 334 VFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQA 393

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L+ G QL    +   F  +  V+S+L+ M+ +CG  + +  +FD +   +   WN L+ 
Sbjct: 394 KLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVG 453

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +  +    + ++TF  +   G++ N  TF  +++ C
Sbjct: 454 VFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGC 490



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 197/382 (51%), Gaps = 6/382 (1%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+  L    +L +   GTQVH  +VK GF  ++F+ +NL  MYSKCG      + F+EM 
Sbjct: 179 LSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP 238

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ V WT ++   ++NG+F   L  Y+ M T+    ++  + S +  C ++ AS FG S
Sbjct: 239 CKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKS 298

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHC 224
           +H   LK+  E   F+G ++ + Y+K GD+ +A  VF  I SD   +    A+I GY   
Sbjct: 299 LHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEM 357

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +AL+    +   GI  +++TF + ++ C+  A  + G Q+HG +++   +    + 
Sbjct: 358 DQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVS 417

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           + L+DMY K    D++ ++F+ + + D I+WNTL G FS++         F+  I  G +
Sbjct: 418 STLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLK 477

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           PN VTF  LL+ C     ++ GL     +    G + +E   S +I +  R G ++ A  
Sbjct: 478 PNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAED 537

Query: 404 VFDNVSYK-NITTWNELLSGYC 424
             +N+ ++ N+  W   L G C
Sbjct: 538 FINNMPFEPNVFGWCSFL-GAC 558



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 15/288 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L  +LS    LK+   G  +H  I+KLGF  + F+ N L  MYSK G       VF
Sbjct: 276 DQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF 335

Query: 103 DEMAE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
              ++  ++VS T I+   ++  + +  L  +VD++  G  PNEF   S++K C +    
Sbjct: 336 QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKL 395

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  +H   +K   +++PFV  ++++ Y K G    + ++F  I + D   WN ++G +
Sbjct: 396 EHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVF 455

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS---LVAD----FDIGRQIHGLIIR 274
           +  G G  A+   + M+  G+  +  TF+N L+GCS   +V D    F    +I+G++ +
Sbjct: 456 SQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPK 515

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
            E        + +ID+  ++  +  A      M  + +V  W +  G 
Sbjct: 516 EEH------YSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGA 557


>gi|302813108|ref|XP_002988240.1| hypothetical protein SELMODRAFT_127736 [Selaginella moellendorffii]
 gi|300143972|gb|EFJ10659.1| hypothetical protein SELMODRAFT_127736 [Selaginella moellendorffii]
          Length = 655

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 166/612 (27%), Positives = 306/612 (50%), Gaps = 23/612 (3%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  A ++ ++++  +  ++++ Y + G +  A +VF ++   DV  W AMI  YA 
Sbjct: 30  GKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMITAYAR 89

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSIS 282
            G   + + ++ +ML +G+  +K T + AL     V +    R IH ++ + S +E  +S
Sbjct: 90  NGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVE---ARSIHRILAVESGLEWDVS 146

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  A++ MY +   ++ A   FE+M  K+V++W+    G  E   P     +F   +L G
Sbjct: 147 VGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLLEG 206

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN----VTSSLIYMFCRCGAV 398
           +  + +T   LL  C    D+ +G ++    L   F +E      V ++L+ ++ + G +
Sbjct: 207 AAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNVIVGTALVNLYAKGGDL 266

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD--VLKTFCNIWESGVEVNGCTFFYVVE 456
           E A  VF  +  +N+ TW  L++ +C  CC+ D   L+ F  +   GV  N   F  V+ 
Sbjct: 267 ERACGVFSRMKNRNVVTWTALITAHC--CCNRDEQALEIFRQMQLEGVRPNAVVFVNVLN 324

Query: 457 TCCRSENQQMVGQ------IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
            CC   +    G+      +HG ++ +G +    + ++L+  Y      ++        E
Sbjct: 325 ACC---SMPAAGRTVLELLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEME 381

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
                SW AM++       N EA+ ++  +   G + D     TIL +C+++ A    +S
Sbjct: 382 EHTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALPEVRS 441

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV--YNTLIMAYAH 628
           IH  V + GF+    V++ ++ AY KCG ++ A   F  S ++N +    ++++I   A 
Sbjct: 442 IHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIATSAR 501

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
           HG  +EA+ IF  M+    +    T + V++ACSH G+  K    F SM   Y +  + D
Sbjct: 502 HGCAAEAVAIFHLMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDYKVGRTGD 561

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
              C+ D+L RNG LEDA+ +I  MPFQ + +V+ +LL  CR HG+    + AS+++  +
Sbjct: 562 HCSCMADLLGRNGRLEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRAKEASDQVSGI 621

Query: 749 LPKNDAAHVLLS 760
            P++  ++++LS
Sbjct: 622 NPEHAQSYIVLS 633



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 151/614 (24%), Positives = 275/614 (44%), Gaps = 33/614 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    +LG   D  L  N++ MY +CG      +VFD + +R+++ WT +++A  +
Sbjct: 30  GKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMITAYAR 89

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV--CVSMGASEFGYSIH-CFALKIRIEKN 179
           NG+F  G+ +   M  +G  PN+  + + +    CV         SIH   A++  +E +
Sbjct: 90  NGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVE-----ARSIHRILAVESGLEWD 144

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG ++++ Y + G +  A   F  +   +V  W+  + G          L +   ML 
Sbjct: 145 VSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLL 204

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQI--HGLIIR--SEVECSISIVNALIDMYIKSS 295
           EG  +DK T +  L  CS   D  +G +I    L+ R   E+E ++ +  AL+++Y K  
Sbjct: 205 EGAAVDKITLVTLLDLCSSCEDVVVGGEILPDDLLERFGEEIETNVIVGTALVNLYAKGG 264

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A  VF RM +++V++W  L           Q   +F +  L G RPN V F  +L 
Sbjct: 265 DLERACGVFSRMKNRNVVTWTALITAHCCCNRDEQALEIFRQMQLEGVRPNAVVFVNVLN 324

Query: 356 QC------GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            C      G+ +   L L L  + +  G   +  V ++L+ ++ R    E  H VF  + 
Sbjct: 325 ACCSMPAAGRTV---LELLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEME 381

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
                +W  +++ +  N  +A+ L  +  +   G   +  TF  ++  C        V  
Sbjct: 382 EHTTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALPEVRS 441

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVH 526
           IH  + ++GF     + ++L+ +Y   G L+++   F  S+    L+ + W +M++    
Sbjct: 442 IHSCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIATSAR 501

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-----IKLGFN 581
            G   EAV IFH + + G + D+  L  +L +C+  G     K++  FV      K+G  
Sbjct: 502 HGCAAEAVAIFHLMQQEGARADDVTLLCVLAACSHGG--MTAKAVEFFVSMIHDYKVGRT 559

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            +    S + D   + G ++ A     +        V+ TL+ A   HG +  A E  D+
Sbjct: 560 GD--HCSCMADLLGRNGRLEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRAKEASDQ 617

Query: 642 MKLANLQPSQATFV 655
           +   N + +Q+  V
Sbjct: 618 VSGINPEHAQSYIV 631



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 127/310 (40%), Gaps = 29/310 (9%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           VL   +HG +V  G   D+ +   L+ +Y++      G RVF EM E   VSWT +++  
Sbjct: 336 VLELLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEEHTTVSWTAMIACF 395

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QN      L +Y  M   G   +     +++  C S+ A     SIH    +     N 
Sbjct: 396 AQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALPEVRSIHSCVHESGFHIND 455

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSD---DVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            V  ++++ Y K G +  A R+F   SS    +   W++MI   A  G   EA+ +   M
Sbjct: 456 AVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIATSARHGCAAEAVAIFHLM 515

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV------------N 285
             EG   D  T +  L  CS           HG +    VE  +S++            +
Sbjct: 516 QQEGARADDVTLLCVLAACS-----------HGGMTAKAVEFFVSMIHDYKVGRTGDHCS 564

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNPGQTASLFHKFILSGSR 344
            + D+  ++  ++ A ++  +M  +   S W TL G    + +  +      +  +SG  
Sbjct: 565 CMADLLGRNGRLEDAEELIRKMPFQAAASVWMTLLGACRTHGDLPRAKEASDQ--VSGIN 622

Query: 345 PNHVTFSILL 354
           P H    I+L
Sbjct: 623 PEHAQSYIVL 632



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  + K +H    +LG + +  +A  ++  Y +CG I GAR  FD + +  DVI++  +I
Sbjct: 26  ALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFD-NLHDRDVILWTAMI 84

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            AYA +G   + M +   M L  + P++   +++++A      V +   + + +  + G+
Sbjct: 85  TAYARNGDFQQGMALLRAMLLDGVAPNK---ITILAALGTTDCVVEARSIHRILAVESGL 141

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           +        +V M  R G LEDA    E MP +   T +   ++GC+     ELG
Sbjct: 142 EWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVT-WSVAMAGCKELHRPELG 195


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 184/689 (26%), Positives = 316/689 (45%), Gaps = 90/689 (13%)

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           MK C S+ +      +H   + + ++ + F+   +LN Y+  G ++ A RVF  I   +V
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 70

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSM-----LFEGITMDKYTFINALQGCSLVADFDIGR 266
             WN MI G+A  G   EA  +   M     +     M  Y F N     ++ A   +G 
Sbjct: 71  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGY-FHNGELEATIKASGSLGY 129

Query: 267 -----QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF----------------- 304
                Q+HG   + +      +  +++DMYIK   MD+A KVF                 
Sbjct: 130 LKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYG 189

Query: 305 --------------ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
                          +M ++D +SWNT+    S++    +T + F +    G RPN +T+
Sbjct: 190 YSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTY 249

Query: 351 SILLRQCGKLLDLDLGLQLQ--------CLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           + +L  C  + DL+ G  L         CL ++ G          LI M+ +CG +E A 
Sbjct: 250 ASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAG--------CGLIDMYAKCGRLESAR 301

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            VFD ++  N  +W  L+ G        + L  F  + E  V  +  T   V+  C   +
Sbjct: 302 QVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQK 361

Query: 463 NQQMVGQIHGAIIKTGFSS--------------CGYIC-----------------SSLIK 491
           +  +  Q+H   I  G  S              CG +                  +++I 
Sbjct: 362 DISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
           ++   G ++ + E+ +     ++ SW +M++  + +G+  E + ++  ++  G K D   
Sbjct: 422 AFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWIT 481

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
             T +++CA +        I     KLGF++ V VA++V+  Y++CG I+ A+  F  S 
Sbjct: 482 FSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFS-SI 540

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              +++ +N ++  YA +G   + +EIF+KM      P Q ++VSV+S CSH G V +G 
Sbjct: 541 VMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQ 600

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
             F SM   +G+ P  + + C+VD+L R G LE AK++I  MPF+P+  ++ +LL+ CRI
Sbjct: 601 YYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRI 660

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           HGN +L E A + LL L  +   ++ LL+
Sbjct: 661 HGNTKLAELAVKNLLELDAEGPGSYCLLA 689



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 167/741 (22%), Positives = 301/741 (40%), Gaps = 92/741 (12%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           +S+    +L+S  +  ++H  ++ +G  + IFLQN+L+ MYS CG      RVF  +   
Sbjct: 9   ESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP 68

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKT------NGFMPNEFAVG---SVMKVCVSMG 159
           N+ SW  ++S    +G+     K++  M        N  M   F  G   + +K   S+G
Sbjct: 69  NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGSLG 128

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             +    +H FA K     +  V  SVL+ Y K G +  A++VF    +  + CWN+MI 
Sbjct: 129 YLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIY 188

Query: 220 GY-------------------------------AHCGYGFEALNVVSSMLFEGITMDKYT 248
           GY                               +  G+G E LN    M  +G   +  T
Sbjct: 189 GYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMT 248

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + + L  C+ + D + G  +H  I+R E    +     LIDMY K   ++ A +VF+ + 
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLT 308

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           + + +SW +L GG ++     +   LF++        +  T + +L  C    D+ +G Q
Sbjct: 309 EHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQ 368

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRC-------------------------------GA 397
           L    +  G      V ++L+ M+ +C                               G 
Sbjct: 369 LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGD 428

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           VE A   FD +  +N+ +WN +L+ Y       + LK +  +   GV+ +  TF   +  
Sbjct: 429 VEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISA 488

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C       +  QI     K GFSS   + +S++  Y   GQ++ + +  +     ++ SW
Sbjct: 489 CADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSW 548

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----------AYQR 567
            AMM+     G   + + IF  ++  G  PD+    ++L+ C+  G          +  +
Sbjct: 549 NAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTK 608

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
              I P        +E +V   ++D   + G ++ A+   +Q     +  ++  L+ A  
Sbjct: 609 DHGISPM-------SEHFV--CMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACR 659

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            HG    A E+  K  L        ++  + +  S  G + +G    + +    G++ +P
Sbjct: 660 IHGNTKLA-ELAVKNLLELDAEGPGSYCLLANIYSESGKI-QGVTNVRKLMRDKGVRKNP 717

Query: 688 DCYGCLVDMLSRNGYLEDAKH 708
            C    VD       ++D  H
Sbjct: 718 GCSWIEVDNRVHVFTVDDTNH 738



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 209/470 (44%), Gaps = 47/470 (10%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           F  +++ C+ +    I R++H  +I   ++ SI + N L++MY     +  A++VF  + 
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKF----------ILSGSRPNHVTFSILLRQCG 358
             +V SWNT+  GF+++    +   LF K           ++SG   N       ++  G
Sbjct: 67  FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG-ELEATIKASG 125

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
            L  L L LQL   A    F  +  V +S++ M+ +CGA++ A  VF      ++  WN 
Sbjct: 126 SLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNS 185

Query: 419 LLSGY----------------------CFNCC---------DADVLKTFCNIWESGVEVN 447
           ++ GY                       +N            A+ L TF  +W  G   N
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPN 245

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
             T+  V+  C    + +    +H  I++       Y    LI  Y   G+L+++ +  +
Sbjct: 246 SMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFD 305

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
           G    +  SW +++  +   G   EA+ +F+ + E     D++ L T+L  C +      
Sbjct: 306 GLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISI 365

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            + +H   I  G ++ V VA+A++  YAKCGD+  A  AF+      D+I +  +I A++
Sbjct: 366 GEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFEL-MPIRDIISWTAMITAFS 424

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
             G V +A E FDKM   N+     ++ S+++    +G  ++G  ++  M
Sbjct: 425 QAGDVEKAREYFDKMPERNV----ISWNSMLATYMQRGYWEEGLKVYIQM 470



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 186/432 (43%), Gaps = 65/432 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            R + +  A  LS   ++     G  +H  IV++    D++    LI MY+KCG      
Sbjct: 242 FRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESAR 301

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VFD + E N VSWT ++    Q G  +  L ++  M+      ++F + +V+ VC+S  
Sbjct: 302 QVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQK 361

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF---------------- 203
               G  +H   +   ++ +  V  +++  YAK GDV  A   F                
Sbjct: 362 DISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421

Query: 204 -YSISSD--------------DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            +S + D              +V  WN+M+  Y   GY  E L V   ML EG+  D  T
Sbjct: 422 AFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWIT 481

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           F  ++  C+ +A   +G QI     +     ++S+ N+++ MY +   ++ A K+F  + 
Sbjct: 482 FSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIV 541

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            K+++SWN +  G+++N    +   +F K +  G+ P+ +++  +L  C           
Sbjct: 542 MKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCS---------- 591

Query: 369 LQCLALHCGFLDEE-----NVTSS------------LIYMFCRCGAVEMAHSVFDNVSYK 411
                 H GF+ E      ++T              ++ +  R G +E A ++ + + +K
Sbjct: 592 ------HSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFK 645

Query: 412 -NITTWNELLSG 422
            N   W  LL+ 
Sbjct: 646 PNAAIWGALLAA 657



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 137/327 (41%), Gaps = 45/327 (13%)

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F+  ++ C    +  +  ++H  +I  G  S  ++ + L+  Y N G + +++    G  
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIM 66

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI---------LGTILNSCAA 561
             ++ SW  M+S     G   EA  +F  + E        +         L   + +  +
Sbjct: 67  FPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKASGS 126

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN------- 614
           +G  +    +H F  K  F  +  V ++V+D Y KCG +  A+  F ++ N +       
Sbjct: 127 LGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSM 186

Query: 615 -----------------------DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
                                  D + +NT+I   + HG  +E +  F +M     +P+ 
Sbjct: 187 IYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNS 246

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY-GC-LVDMLSRNGYLEDAKHV 709
            T+ SV+SAC+    ++ G  L   +     M+P  D Y GC L+DM ++ G LE A+ V
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARI---VRMEPCLDVYAGCGLIDMYAKCGRLESARQV 303

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKE 736
            + +  + +   + SL+ G    G +E
Sbjct: 304 FDGLT-EHNAVSWTSLIGGVAQAGFQE 329


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 181/678 (26%), Positives = 325/678 (47%), Gaps = 20/678 (2%)

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQN---GEFDMGLKMYVDMKTN-GFMP-----NEF 146
           GW LR  +    R L+  TL    A        +   L+   D  T+   +P     + F
Sbjct: 5   GWMLRPLN----RGLLLPTLSCPVAPHRRGFAAYAAALQWLEDELTSLAILPSVPGVDSF 60

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKI----RIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           A    ++ C++ G +  G ++H   ++     R++   F    +LN Y KLG +A+A R+
Sbjct: 61  ACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDL--FCANVLLNMYGKLGPLASARRL 118

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  +   ++  +  ++  +A  G    A  +   + +EG  ++++     L+    +   
Sbjct: 119 FDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAA 178

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +   +H    +   + +  + + LID Y   S +  A  VF  +  KD + W  +   +
Sbjct: 179 GLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCY 238

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           SEN  P     +F K  +SG +PN    + +L+    L  + LG  +   A+      E 
Sbjct: 239 SENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEP 298

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           +V  +L+ M+ +CG ++ A   F+ + Y ++   + ++S Y  +  +    + F  +  S
Sbjct: 299 HVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 358

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            V  N  +   V++ C          QIH   IK G  S  ++ ++L+  Y     +D+S
Sbjct: 359 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 418

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +     +  SW  ++      G   EA+++F  +  A     +    ++L +CA+ 
Sbjct: 419 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 478

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
            + +    IH  + K  FN +  + +++ID YAKCG I+ A   F Q     D+I +N +
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF-QHLMERDIISWNAI 537

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  YA HG  ++A+E+FD+M  +N++ +  TFV+++S CS  GLV+ G  LF SM   +G
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHG 597

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           ++PS + Y C+V +L R G L DA   I  +P  PS  V+R+LLS C IH N  LG +++
Sbjct: 598 IKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSA 657

Query: 743 EKLLLLLPKNDAAHVLLS 760
           EK+L + P+++  +VLLS
Sbjct: 658 EKILEIEPQDETTYVLLS 675



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/601 (24%), Positives = 282/601 (46%), Gaps = 7/601 (1%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  VHGH+V+ G     D+F  N L+ MY K G      R+FD M ERN+VS+  +V A 
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G+F+    ++  ++  G   N+F + +++K+ ++M A+     +H  A K+  + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG  +++ Y+    V+ AE VF  I   D   W AM+  Y+       A  V S M   
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +   + L+    +    +G+ IHG  I++  +    +  AL+DMY K   +  A
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
              FE +   DVI  + +   ++++    Q   LF + + S   PN  + S +L+ C  +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           + LD G Q+   A+  G   +  V ++L+  + +C  ++ +  +F ++   N  +WN ++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G+  +    + L  FC +  + +     T+  V+  C  + + +  GQIH +I K+ F+
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   I +SLI +Y   G + ++ + F +  ER D+ SW A++S     G   +A+ +F  
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADALELFDR 556

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           + ++  + ++     +L+ C++ G      S+     I  G    +   + ++    + G
Sbjct: 557 MNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAG 616

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A        ++   +V+  L+ +   H  V  A+  F   K+  ++P   T   ++
Sbjct: 617 RLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV--ALGRFSAEKILEIEPQDETTYVLL 674

Query: 659 S 659
           S
Sbjct: 675 S 675



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   L L+  + +  L   VH    KLG  ++ F+ + LI  YS C        VF+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ V WT +VS   +N   +   +++  M+ +G  PN FA+ SV+K  V + +   G  
Sbjct: 225 RKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH  A+K   +  P VG ++L+ YAK GD+  A   F  I  DDV   + MI  YA    
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQ 344

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A  +   ++   +  ++Y+  + LQ C+ +   D G+QIH   I+   E  + + NA
Sbjct: 345 NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNA 404

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+D Y K + MD + K+F  + D + +SWNT+  GFS++    +  S+F +   +     
Sbjct: 405 LMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCT 464

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT+S +LR C     +    Q+ C      F ++  + +SLI  + +CG +  A  VF 
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++  ++I +WN ++SGY  +   AD L+ F  + +S VE N  TF  ++  C
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVC 576



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 186/383 (48%), Gaps = 2/383 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + +P  L   L  +  L S VLG  +HG  +K     +  +   L+ MY+KCG       
Sbjct: 260 KPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARL 319

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F+ +   +++  + ++S   Q+ + +   ++++ +  +  +PNE+++ SV++ C +M  
Sbjct: 320 AFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQ 379

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +FG  IH  A+KI  E + FVG ++++FYAK  D+ ++ ++F S+   +   WN ++ G
Sbjct: 380 LDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVG 439

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           ++  G G EAL+V   M    +   + T+ + L+ C+  A      QIH  I +S     
Sbjct: 440 FSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNND 499

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             I N+LID Y K   +  A KVF+ + ++D+ISWN +  G++ +        LF +   
Sbjct: 500 TVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK 559

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
           S    N +TF  LL  C     ++ GL L   + +  G        + ++ +  R G + 
Sbjct: 560 SNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLN 619

Query: 400 MAHSVFDNV-SYKNITTWNELLS 421
            A     ++ S  +   W  LLS
Sbjct: 620 DALQFIGDIPSAPSAMVWRALLS 642


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/618 (26%), Positives = 315/618 (50%), Gaps = 10/618 (1%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRI---EKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           S+++ C ++ +      +H   L        ++PFV  ++L+ YA+ G +  +  VF  +
Sbjct: 15  SLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKM 74

Query: 207 SSDDVGCWNAMIGGY--AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
               +  +NA++  Y  A   +   AL + + M+  G+     TF + LQ  SL+  +  
Sbjct: 75  PRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWF 134

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G  +H    +  +   I +  +L++MY     +  A  VF  M D+D ++WN+L  G+ +
Sbjct: 135 GSSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLK 193

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N    +   LF K +  G  P   T+ ++L  C +L D   G  +    +      + ++
Sbjct: 194 NNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHL 253

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+C  G ++ A+ +F  +   ++ +WN +++GY  N      +  F  + E   
Sbjct: 254 QNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCF 313

Query: 445 -EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            + +  T+  ++       +      +H  +IKTGF    ++ S+L+  Y    + D ++
Sbjct: 314 PKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAW 373

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
                    D+  W  M++          A+  F  +V  G + D+Y+L  ++N+CA + 
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             ++ + IH + +KLG++ E+ V+ ++ID YAK G ++ A + F Q  +  D+  +N+++
Sbjct: 434 VLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQ-VSEPDLKCWNSML 492

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y+HHG+V EA+++F+++    L P Q TF+S++SACSH  LV++G  L+  M+S  G+
Sbjct: 493 GGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNS-IGL 551

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRSLLSGCRIHGNKELGEWAS 742
            P    Y C+V + SR   LE+A+ +I   P+ + +  ++R+LLS C I+ N ++G  A+
Sbjct: 552 IPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAA 611

Query: 743 EKLLLLLPKNDAAHVLLS 760
           E++L L  ++    VLLS
Sbjct: 612 EEVLRLKAEDGPTLVLLS 629



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 276/569 (48%), Gaps = 10/569 (1%)

Query: 65  QVHGHIVKL--GFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-- 119
           Q+H  I+     FT+   F+ NN+++MY++CG       VFD+M  R +VS+  +++A  
Sbjct: 31  QLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYS 90

Query: 120 -AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
            A  N      L++Y  M TNG  P+     S+++    +    FG S+H    K+ +  
Sbjct: 91  RASPNHAIS-ALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGL-N 148

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  S+LN Y+  GD+++AE VF+ +   D   WN++I GY       E + +   M+
Sbjct: 149 DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMM 208

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             G    ++T+   L  CS + D+  GR IH  +I   V   + + NAL+DMY  +  M 
Sbjct: 209 SVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQ 268

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQC 357
            A+++F RM + D++SWN++  G+SEN++  +  +LF +   +   +P+  T++ ++   
Sbjct: 269 TAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISAT 328

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
           G       G  L    +  GF     V S+L+ M+ +    + A  VF ++S K++  W 
Sbjct: 329 GVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWT 388

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
           E+++GY         ++ F  +   G EV+      VV  C      +    IH   +K 
Sbjct: 389 EMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKL 448

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+     +  SLI  Y   G L+ ++   +     D+  W +M+    H G   EA+ +F
Sbjct: 449 GYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVF 508

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +++ G  PD+    ++L++C+     ++ K +  ++  +G    +   S ++  +++ 
Sbjct: 509 EEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRA 568

Query: 598 GDIKGARMAFDQS-FNSNDVIVYNTLIMA 625
             ++ A    ++S +  +++ ++ TL+ A
Sbjct: 569 ALLEEAEEIINKSPYIEDNLELWRTLLSA 597



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 18/496 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR         L  S  L+    G+ +H    KLG  NDI LQ +L+ MYS CG      
Sbjct: 112 LRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKLGL-NDICLQTSLLNMYSNCGDLSSAE 170

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF +M +R+ V+W  ++   ++N + + G+ +++ M + GF P +F    V+  C  + 
Sbjct: 171 LVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLK 230

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH   +   +  +  +  ++++ Y   G++  A R+F  + + D+  WN+MI 
Sbjct: 231 DYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIA 290

Query: 220 GYAHCGYGFEALNV---VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           GY+    G +A+N+   +  M F     D YT+   +    +      G+ +H  +I++ 
Sbjct: 291 GYSENEDGEKAMNLFVQLQEMCFP--KPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTG 348

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            E S+ + + L+ MY K+   D A++VF  ++ KDV+ W  +  G+S+  +       F 
Sbjct: 349 FERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFF 408

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + +  G   +    S ++  C  L  L  G  + C A+  G+  E +V+ SLI M+ + G
Sbjct: 409 QMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNG 468

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           ++E A+ VF  VS  ++  WN +L GY  +    + L+ F  I + G+  +  TF  ++ 
Sbjct: 469 SLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLS 528

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYIC-----SSLIKSYVNFGQLDNSFEFSNGAER 511
            C  S   ++V Q  G  +    +S G I      S ++  +     L+ + E  N +  
Sbjct: 529 ACSHS---RLVEQ--GKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPY 583

Query: 512 LD--MASWGAMMSALV 525
           ++  +  W  ++SA V
Sbjct: 584 IEDNLELWRTLLSACV 599



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 178/373 (47%), Gaps = 3/373 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK    G  +H H++    + D+ LQN L+ MY   G      R+F  M   +LVSW  +
Sbjct: 229 LKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSM 288

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++   +N + +  + ++V ++   F  P+++    ++       +S +G S+H   +K  
Sbjct: 289 IAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTG 348

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E++ FVG ++++ Y K  +  AA RVF SIS  DV  W  MI GY+    G  A+    
Sbjct: 349 FERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFF 408

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+ EG  +D Y     +  C+ +A    G  IH   ++   +  +S+  +LIDMY K+ 
Sbjct: 409 QMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNG 468

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A+ VF ++++ D+  WN++ GG+S +    +   +F + +  G  P+ VTF  LL 
Sbjct: 469 SLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLS 528

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY--KNI 413
            C     ++ G  L       G +      S ++ +F R   +E A  + +   Y   N+
Sbjct: 529 ACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNL 588

Query: 414 TTWNELLSGYCFN 426
             W  LLS    N
Sbjct: 589 ELWRTLLSACVIN 601



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 131/526 (24%), Positives = 234/526 (44%), Gaps = 14/526 (2%)

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSE---VECSISIVNALIDMYIKSSGMDYAFKVFER 306
           ++ LQ CS V      RQ+H LI+ +       S  + N ++ MY +   +  +  VF++
Sbjct: 14  LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73

Query: 307 MADKDVISWNTLFGGFSENKNPGQTAS---LFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           M  + ++S+N L   +S   +P    S   L+ + + +G RP+  TF+ LL+    L   
Sbjct: 74  MPRRTIVSYNALLAAYSR-ASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHW 132

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  L       G L++  + +SL+ M+  CG +  A  VF ++  ++   WN L+ GY
Sbjct: 133 WFGSSLHAKGFKLG-LNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGY 191

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    + +  F  +   G      T+  V+ +C R ++ +    IH  +I    S   
Sbjct: 192 LKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDL 251

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ ++L+  Y N G +  ++   +  E  D+ SW +M++         +A+ +F  L E 
Sbjct: 252 HLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEM 311

Query: 544 G-EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              KPD+Y    I+++     +    KS+H  VIK GF   V+V S ++  Y K  +   
Sbjct: 312 CFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDA 371

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F  S +  DV+++  +I  Y+       A+  F +M     +        V++AC+
Sbjct: 372 AWRVF-CSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACA 430

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           +  ++ +G ++      + G        G L+DM ++NG LE A  V   +  +P    +
Sbjct: 431 NLAVLRQGEII-HCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVS-EPDLKCW 488

Query: 723 RSLLSGCRIHGNKELGEWASEKLLL--LLPKNDAAHVLLSKRKRQR 766
            S+L G   HG  E      E++L   L+P       LLS     R
Sbjct: 489 NSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSR 534



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 144/291 (49%), Gaps = 2/291 (0%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F + D    A  +S +    S   G  +H  ++K GF   +F+ + L++MY K       
Sbjct: 313 FPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAA 372

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            RVF  ++ +++V WT +++   +  +    ++ +  M   G   +++ +  V+  C ++
Sbjct: 373 WRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANL 432

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  IHC+A+K+  +    V  S+++ YAK G + AA  VF  +S  D+ CWN+M+
Sbjct: 433 AVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSML 492

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           GGY+H G   EAL V   +L +G+  D+ TF++ L  CS     + G+ +   +    + 
Sbjct: 493 GGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLI 552

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKN 327
             +   + ++ ++ +++ ++ A ++  +    + ++  W TL      NKN
Sbjct: 553 PGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKN 603


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 306/621 (49%), Gaps = 7/621 (1%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKI----RIEKNPFVGCSVLNFYAKLGDVAAA 199
           + FA    ++ C++ G +  G ++H   ++     R++   F    +LN Y KLG +A+A
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDL--FCANVLLNMYGKLGPLASA 115

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            R+F  +   ++  +  ++  +A  G    A  +   + +EG  ++++     L+    +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
               +   +H    +   + +  + + LID Y   S +  A  VF  +  KD + W  + 
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             +SEN  P     +F K  +SG +PN    + +L+    L  + LG  +   A+     
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            E +V  +L+ M+ +CG ++ A   F+ + Y ++   + ++S Y  +  +    + F  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             S V  N  +   V++ C          QIH   IK G  S  ++ ++L+  Y     +
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D+S +  +     +  SW  ++      G   EA+++F  +  A     +    ++L +C
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A+  + +    IH  + K  FN +  + +++ID YAKCG I+ A   F Q     D+I +
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF-QHLMERDIISW 534

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           N +I  YA HG  ++A+E+FD+M  +N++ +  TFV+++S CS  GLV+ G  LF SM  
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
            +G++PS + Y C+V +L R G L DA   I  +P  PS  V+R+LLS C IH N  LG 
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
           +++EK+L + P+++  +VLLS
Sbjct: 655 FSAEKILEIEPQDETTYVLLS 675



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 298/630 (47%), Gaps = 9/630 (1%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  VHGH+V+ G     D+F  N L+ MY K G      R+FD M ERN+VS+  +V A 
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G+F+    ++  ++  G   N+F + +++K+ ++M A+     +H  A K+  + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG  +++ Y+    V+ AE VF  I   D   W AM+  Y+       A  V S M   
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +   + L+    +    +G+ IHG  I++  +    +  AL+DMY K   +  A
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
              FE +   DVI  + +   ++++    Q   LF + + S   PN  + S +L+ C  +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           + LD G Q+   A+  G   +  V ++L+  + +C  ++ +  +F ++   N  +WN ++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G+  +    + L  FC +  + +     T+  V+  C  + + +  GQIH +I K+ F+
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   I +SLI +Y   G + ++ + F +  ER D+ SW A++S     G   +A+ +F  
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADALELFDR 556

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           + ++  + ++     +L+ C++ G      S+     I  G    +   + ++    + G
Sbjct: 557 MNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAG 616

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSV 657
            +  A        ++   +V+  L+ +   H  V  A+  F   K+  ++P  + T+V +
Sbjct: 617 RLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV--ALGRFSAEKILEIEPQDETTYVLL 674

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +  +  G +D+  LL KSM    G++  P
Sbjct: 675 SNMYAAAGSLDQVALLRKSM-RNIGVRKVP 703



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   L L+  + +  L   VH    KLG  ++ F+ + LI  YS C        VF+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ V WT +VS   +N   +   +++  M+ +G  PN FA+ SV+K  V + +   G  
Sbjct: 225 RKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH  A+K   +  P VG ++L+ YAK GD+  A   F  I  DDV   + MI  YA    
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQ 344

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A  +   ++   +  ++Y+  + LQ C+ +   D G+QIH   I+   E  + + NA
Sbjct: 345 NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNA 404

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+D Y K + MD + K+F  + D + +SWNT+  GFS++    +  S+F +   +     
Sbjct: 405 LMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCT 464

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT+S +LR C     +    Q+ C      F ++  + +SLI  + +CG +  A  VF 
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++  ++I +WN ++SGY  +   AD L+ F  + +S VE N  TF  ++  C
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVC 576



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 229/502 (45%), Gaps = 23/502 (4%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI--VNALIDMYIKSSGMDYAF 301
           +D +     LQGC    D   GR +HG ++R      + +   N L++MY K   +  A 
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+RM +++++S+ TL    ++  +    A+LF +    G   N    + +L+    + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
              L   +   A   G      V S LI  +  C  V  A  VF+ +  K+   W  ++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  N C  +  + F  +  SG + N      V++      +  +   IHG  IKT   +
Sbjct: 237 CYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDT 296

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++  +L+  Y   G + ++          D+     M+S       N +A  +F  L+
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            +   P+EY L ++L +C  +      K IH   IK+G  ++++V +A++D YAKC D+ 
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            +   F    ++N+V  +NT+++ ++  GL  EA+ +F +M+ A +  +Q T+ SV+ AC
Sbjct: 417 SSLKIFSSLRDANEV-SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 662 S------HKGLVDKGCLLFKSM---DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           +      H G +   C + KS    D+  G          L+D  ++ GY+ DA  V + 
Sbjct: 476 ASTASIRHAGQIH--CSIEKSTFNNDTVIG--------NSLIDTYAKCGYIRDALKVFQH 525

Query: 713 MPFQPSPTVYRSLLSGCRIHGN 734
           +  +     + +++SG  +HG 
Sbjct: 526 L-MERDIISWNAIISGYALHGQ 546



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 7/400 (1%)

Query: 29  CGNNQFCSDSFLR-----KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           C  N F   S +R      +P  L   L  +  L S VLG  +HG  +K     +  +  
Sbjct: 243 CPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGG 302

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            L+ MY+KCG        F+ +   +++  + ++S   Q+ + +   ++++ +  +  +P
Sbjct: 303 ALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP 362

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           NE+++ SV++ C +M   +FG  IH  A+KI  E + FVG ++++FYAK  D+ ++ ++F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            S+   +   WN ++ G++  G G EAL+V   M    +   + T+ + L+ C+  A   
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
              QIH  I +S       I N+LID Y K   +  A KVF+ + ++D+ISWN +  G++
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEE 382
            +        LF +   S    N +TF  LL  C     ++ GL L   + +  G     
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLS 421
              + ++ +  R G +  A     ++ S  +   W  LLS
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 189/737 (25%), Positives = 331/737 (44%), Gaps = 80/737 (10%)

Query: 66   VHGHIVKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
             H  ++KL    ++ F+   LI  Y + G FG+   VF     RN VSW   +  A   G
Sbjct: 443  THARMMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPRNQVSWRDFLEKAEDFG 502

Query: 125  -EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK-NPFV 182
             E    L+ +V ++  G   +E  +  V ++C  +     G++IH   +K  ++  +  V
Sbjct: 503  VEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRV 562

Query: 183  GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ FY +   +  A ++F  +   D   WN ++      G   +A+ +   M F G 
Sbjct: 563  VSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGA 622

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                 T +  LQ CS    F  GRQIHG ++R   E ++S+ N+LI MY ++  ++ + K
Sbjct: 623  KAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRK 682

Query: 303  VFERMADK-----------------------------------DVISWNTLFGGFSENKN 327
            VF  M D+                                   D+++WN+L  G++    
Sbjct: 683  VFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKAL 742

Query: 328  PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                 ++  +  ++G +PN  + S LL+   +   + LG  +    +      +  V ++
Sbjct: 743  SRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETT 802

Query: 388  LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
            LI M+ + G +  A  VFD +  KNI  WN L+SG  +                      
Sbjct: 803  LIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSY---------------------- 840

Query: 448  GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-- 505
                     T    E + ++ ++     K G  S     +SL+  Y  +G+ + +     
Sbjct: 841  ---------TGLLKEAEALISRME----KEGIKSNAVTWNSLVSGYATWGKTEKALAVVG 887

Query: 506  ---SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
                NG E  ++ SW A++S     G+    + IF  + E G  P+   + ++L     +
Sbjct: 888  KMKKNGVEP-NVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCL 946

Query: 563  GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                  K +H F +K     + +VA+A++D YAK GD++ A   F     +  +  +N +
Sbjct: 947  SLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIF-WGIKNKPLASWNCM 1005

Query: 623  IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
            IM YA      E + +F+ M  A ++P   TF SV+S C + GLV +G   F  M S YG
Sbjct: 1006 IMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYG 1065

Query: 683  MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
            + P+ +   C+V++L R+GYL++A   I  MP +P  T++ + LS C+IH + EL E A 
Sbjct: 1066 VIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAW 1125

Query: 743  EKLLLLLPKNDAAHVLL 759
            ++L +L P N A ++++
Sbjct: 1126 KRLQVLEPHNSANYMMM 1142



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/561 (22%), Positives = 244/561 (43%), Gaps = 75/561 (13%)

Query: 43   DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRV 101
            D + LA    +   L  R LG  +HG ++K G  N D  + + L+  Y +C       ++
Sbjct: 523  DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKI 582

Query: 102  FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
            FDEM +R+ ++W  IV   +Q+G ++  +K++  M+ +G    +  +  +++VC +    
Sbjct: 583  FDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGF 642

Query: 162  EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
              G  IH + L++  E N  +  S++  Y++ G + ++ +VF S+   ++  WN+++  Y
Sbjct: 643  AQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSY 702

Query: 222  AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS------------------------ 257
               GY  +A+ ++  M   G+  D  T+ + L G +                        
Sbjct: 703  TRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNT 762

Query: 258  ------LVADFD-----IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
                  L A ++     +G+ IHG +IR+++   + +   LIDMYIK+  + YA  VF+ 
Sbjct: 763  SSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 822

Query: 307  MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
            M +K++++WN+L  G S      +  +L  +    G + N VT+                
Sbjct: 823  MDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTW---------------- 866

Query: 367  LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF----DNVSYKNITTWNELLSG 422
                               +SL+  +   G  E A +V      N    N+ +W  +LSG
Sbjct: 867  -------------------NSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSG 907

Query: 423  YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
               N    + LK F  + E GV  N  T   ++             ++H   +K   +  
Sbjct: 908  CSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRD 967

Query: 483  GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             ++ ++L+  Y   G L ++ E   G +   +ASW  M+          E + +F++++E
Sbjct: 968  AHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLE 1027

Query: 543  AGEKPDEYILGTILNSCAAIG 563
            AG +PD     ++L+ C   G
Sbjct: 1028 AGIEPDAITFTSVLSVCKNSG 1048



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 234/517 (45%), Gaps = 74/517 (14%)

Query: 47   LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
            + K L +  N +    G Q+HG++++LGF +++ + N+LI MYS+ G      +VF+ M 
Sbjct: 629  MVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMV 688

Query: 107  ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT---------------------------- 138
            +RNL SW  IVS+  + G  D  + +  +M+T                            
Sbjct: 689  DRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIA 748

Query: 139  -------NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
                    G  PN  ++ S+++     G  + G +IH + ++ ++  + +V  ++++ Y 
Sbjct: 749  VLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYI 808

Query: 192  KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
            K G +  A  VF  +   ++  WN++I G ++ G   EA  ++S M  EGI        N
Sbjct: 809  KTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKS------N 862

Query: 252  ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            A+   SLV+         G     + E ++++V  +     K +G+           + +
Sbjct: 863  AVTWNSLVS---------GYATWGKTEKALAVVGKM-----KKNGV-----------EPN 897

Query: 312  VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            V+SW  +  G S+N N G    +F K    G  PN  T S LLR  G L  L  G ++  
Sbjct: 898  VVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHS 957

Query: 372  LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
              L      + +V ++L+ M+ + G ++ A  +F  +  K + +WN ++ GY       +
Sbjct: 958  FCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEE 1017

Query: 432  VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV--GQIHGAIIKTGFSSCGYI--CS 487
             +  F  + E+G+E +  TF  V+  C   +N  +V  G  +  ++++ +     I  CS
Sbjct: 1018 GIAVFNAMLEAGIEPDAITFTSVLSVC---KNSGLVREGWKYFDLMRSHYGVIPTIEHCS 1074

Query: 488  SLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
             +++     G LD +++F      + D   WGA +S+
Sbjct: 1075 CMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSS 1111


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 168/621 (27%), Positives = 306/621 (49%), Gaps = 7/621 (1%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKI----RIEKNPFVGCSVLNFYAKLGDVAAA 199
           + FA    ++ C++ G +  G ++H   ++     R++   F    +LN Y KLG +A+A
Sbjct: 58  DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDL--FCANVLLNMYGKLGPLASA 115

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            R+F  +   ++  +  ++  +A  G    A  +   + +EG  ++++     L+    +
Sbjct: 116 RRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAM 175

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
               +   +H    +   + +  + + LID Y   S +  A  VF  +  KD + W  + 
Sbjct: 176 DAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMV 235

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             +SEN  P     +F K  +SG +PN    + +L+    L  + LG  +   A+     
Sbjct: 236 SCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLND 295

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            E +V  +L+ M+ +CG ++ A   F+ + Y ++   + ++S Y  +  +    + F  +
Sbjct: 296 TEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRL 355

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             S V  N  +   V++ C          QIH   IK G  S  ++ ++L+  Y     +
Sbjct: 356 MRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM 415

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           D+S +  +     +  SW  ++      G   EA+++F  +  A     +    ++L +C
Sbjct: 416 DSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A+  + +    IH  + K  FN +  + +++ID YAKCG I+ A   F Q     D+I +
Sbjct: 476 ASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVF-QHLMERDIISW 534

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           N +I  YA HG  ++A+E+FD+M  +N++ +  TFV+++S CS  GLV+ G  LF SM  
Sbjct: 535 NAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
            +G++PS + Y C+V +L R G L DA   I  +P  PS  V+R+LLS C IH N  LG 
Sbjct: 595 DHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGR 654

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
           +++EK+L + P+++  +VLLS
Sbjct: 655 FSAEKILEIEPQDETTYVLLS 675



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 157/630 (24%), Positives = 298/630 (47%), Gaps = 9/630 (1%)

Query: 63  GTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           G  VHGH+V+ G     D+F  N L+ MY K G      R+FD M ERN+VS+  +V A 
Sbjct: 78  GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAH 137

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            Q G+F+    ++  ++  G   N+F + +++K+ ++M A+     +H  A K+  + N 
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNA 197

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG  +++ Y+    V+ AE VF  I   D   W AM+  Y+       A  V S M   
Sbjct: 198 FVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVS 257

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   + +   + L+    +    +G+ IHG  I++  +    +  AL+DMY K   +  A
Sbjct: 258 GCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDA 317

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
              FE +   DVI  + +   ++++    Q   LF + + S   PN  + S +L+ C  +
Sbjct: 318 RLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM 377

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           + LD G Q+   A+  G   +  V ++L+  + +C  ++ +  +F ++   N  +WN ++
Sbjct: 378 VQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIV 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            G+  +    + L  FC +  + +     T+  V+  C  + + +  GQIH +I K+ F+
Sbjct: 438 VGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFN 497

Query: 481 SCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   I +SLI +Y   G + ++ + F +  ER D+ SW A++S     G   +A+ +F  
Sbjct: 498 NDTVIGNSLIDTYAKCGYIRDALKVFQHLMER-DIISWNAIISGYALHGQAADALELFDR 556

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           + ++  + ++     +L+ C++ G      S+     I  G    +   + ++    + G
Sbjct: 557 MNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAG 616

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSV 657
            +  A        ++   +V+  L+ +   H  V  A+  F   K+  ++P  + T+V +
Sbjct: 617 RLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNV--ALGRFSAEKILEIEPQDETTYVLL 674

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +  +  G +D+  LL KSM    G++  P
Sbjct: 675 SNMYAAAGSLDQVALLRKSM-RNIGVRKVP 703



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L   L L+  + +  L   VH    KLG  ++ F+ + LI  YS C        VF+ + 
Sbjct: 165 LTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIV 224

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            ++ V WT +VS   +N   +   +++  M+ +G  PN FA+ SV+K  V + +   G  
Sbjct: 225 RKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKG 284

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH  A+K   +  P VG ++L+ YAK GD+  A   F  I  DDV   + MI  YA    
Sbjct: 285 IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQ 344

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A  +   ++   +  ++Y+  + LQ C+ +   D G+QIH   I+   E  + + NA
Sbjct: 345 NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNA 404

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+D Y K + MD + K+F  + D + +SWNT+  GFS++    +  S+F +   +     
Sbjct: 405 LMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCT 464

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            VT+S +LR C     +    Q+ C      F ++  + +SLI  + +CG +  A  VF 
Sbjct: 465 QVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQ 524

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           ++  ++I +WN ++SGY  +   AD L+ F  + +S VE N  TF  ++  C
Sbjct: 525 HLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVC 576



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 124/502 (24%), Positives = 229/502 (45%), Gaps = 23/502 (4%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI--VNALIDMYIKSSGMDYAF 301
           +D +     LQGC    D   GR +HG ++R      + +   N L++MY K   +  A 
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+RM +++++S+ TL    ++  +    A+LF +    G   N    + +L+    + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
              L   +   A   G      V S LI  +  C  V  A  VF+ +  K+   W  ++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
            Y  N C  +  + F  +  SG + N      V++      +  +   IHG  IKT   +
Sbjct: 237 CYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDT 296

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             ++  +L+  Y   G + ++          D+     M+S       N +A  +F  L+
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            +   P+EY L ++L +C  +      K IH   IK+G  ++++V +A++D YAKC D+ 
Sbjct: 357 RSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMD 416

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            +   F    ++N+V  +NT+++ ++  GL  EA+ +F +M+ A +  +Q T+ SV+ AC
Sbjct: 417 SSLKIFSSLRDANEV-SWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRAC 475

Query: 662 S------HKGLVDKGCLLFKSM---DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           +      H G +   C + KS    D+  G          L+D  ++ GY+ DA  V + 
Sbjct: 476 ASTASIRHAGQIH--CSIEKSTFNNDTVIG--------NSLIDTYAKCGYIRDALKVFQH 525

Query: 713 MPFQPSPTVYRSLLSGCRIHGN 734
           +  +     + +++SG  +HG 
Sbjct: 526 L-MERDIISWNAIISGYALHGQ 546



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 7/400 (1%)

Query: 29  CGNNQFCSDSFLR-----KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           C  N F   S +R      +P  L   L  +  L S VLG  +HG  +K     +  +  
Sbjct: 243 CPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGG 302

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            L+ MY+KCG        F+ +   +++  + ++S   Q+ + +   ++++ +  +  +P
Sbjct: 303 ALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLP 362

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
           NE+++ SV++ C +M   +FG  IH  A+KI  E + FVG ++++FYAK  D+ ++ ++F
Sbjct: 363 NEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIF 422

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            S+   +   WN ++ G++  G G EAL+V   M    +   + T+ + L+ C+  A   
Sbjct: 423 SSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIR 482

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
              QIH  I +S       I N+LID Y K   +  A KVF+ + ++D+ISWN +  G++
Sbjct: 483 HAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEE 382
            +        LF +   S    N +TF  LL  C     ++ GL L   + +  G     
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLS 421
              + ++ +  R G +  A     ++ S  +   W  LLS
Sbjct: 603 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/551 (29%), Positives = 264/551 (47%), Gaps = 37/551 (6%)

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI--KSSGMDYA 300
            + ++  +  L  C  +  F   +QIH  II++ +  ++  ++ LI+     +S  + YA
Sbjct: 26  VLQEHPSLKLLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F  + + ++  WN++  G S + +P      F + I SG  PN  TF  LL+ C KL
Sbjct: 83  ISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKL 142

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV---------------------- 398
                G Q+    L  GF+ +  + +SLI M+ + G +                      
Sbjct: 143 ASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALI 202

Query: 399 ---------EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
                    + A  +FD +  K++ +WN +++GY       + L  F ++ ++ V  N  
Sbjct: 203 AGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNES 262

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C +S    +   +   I   G  S   + ++LI  Y   G L  + E  +  
Sbjct: 263 TIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM 322

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  M+    H     EA+ +F  ++ +G +P E    +IL SCA +GA    K
Sbjct: 323 LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGK 382

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH ++ K   +    +++++ID YAKCG+I  AR  FD       +  +N +I   A H
Sbjct: 383 WIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFD-GMKIKSLASWNAMICGLAMH 441

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   +A E+F KM    ++P++ TFV ++SAC H GLVD G   F SM   Y + P    
Sbjct: 442 GQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQH 501

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           YGC++D+L R G  E+A+ +++ M  +P   ++ SLL  CR HG  ELGE  +E+L  L 
Sbjct: 502 YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELE 561

Query: 750 PKNDAAHVLLS 760
           P N  A+VLLS
Sbjct: 562 PDNPGAYVLLS 572



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/543 (24%), Positives = 239/543 (44%), Gaps = 66/543 (12%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI--AMYSKCGYFGWGLRVFDEMAE 107
           SL L    +S     Q+H HI+K G  N +F  + LI  +  S+ G   + + +F+ + E
Sbjct: 32  SLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEE 91

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            NL  W  ++     +    + L  +V M  +G  PN +    ++K C  + ++  G  I
Sbjct: 92  PNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQI 151

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY- 226
           H   LK+    + F+  S++N YA+ G++  A+ VF   +  D   + A+I GYA  GY 
Sbjct: 152 HAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYM 211

Query: 227 -----------------------GF-------EALNVVSSMLFEGITMDKYTFINALQGC 256
                                  G+       EAL +   M    +  ++ T ++ L  C
Sbjct: 212 DRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           +     D+G  +   I    +  ++ +VNALIDMY K   +  A ++F+ M ++DVISWN
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            + GG++   +  +  +LF + + SG  P  +TF  +L  C  L  +DLG  +       
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
                 ++++SLI ++ +CG +  A  VFD +  K++ +WN ++ G   +       + F
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
             +   G+E N  TF  ++  C            H  ++  G        SS+++ Y   
Sbjct: 452 SKMSSDGIEPNEITFVGILSACK-----------HAGLVDLG----QQFFSSMVQDY--- 493

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
                  + S  ++      +G M+  L   G   EA ++  ++     KPD  I G++L
Sbjct: 494 -------KISPKSQH-----YGCMIDLLGRAGLFEEAESLLQNM---EVKPDGAIWGSLL 538

Query: 557 NSC 559
            +C
Sbjct: 539 GAC 541



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 157/656 (23%), Positives = 271/656 (41%), Gaps = 86/656 (13%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYA--KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           IH   +K  +    F    ++ F A  + GD++ A  +F SI   ++  WN+MI G +  
Sbjct: 48  IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMS 107

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
                AL     M++ G+  + YTF   L+ C+ +A    G+QIH  +++      + I 
Sbjct: 108 LSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIH 167

Query: 285 NALIDMYIKSSGM-------------------------------DYAFKVFERMADKDVI 313
            +LI+MY +S  M                               D A ++F+ M  KDV+
Sbjct: 168 TSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVV 227

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SWN +  G+++     +   LF     +   PN  T   +L  C +   LDLG  ++   
Sbjct: 228 SWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWI 287

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
              G      + ++LI M+ +CG ++ A  +FD++  +++ +WN ++ GY   C   + L
Sbjct: 288 EDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEAL 347

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
             F  +  SGVE    TF  ++ +C       +   IH  I K   S    + +SLI  Y
Sbjct: 348 ALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLY 407

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G +  + +  +G +   +ASW AM+  L   G   +A  +F  +   G +P+E    
Sbjct: 408 AKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFV 467

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
            IL++C            H  ++ LG   + + +S V D              +  S  S
Sbjct: 468 GILSACK-----------HAGLVDLG---QQFFSSMVQD--------------YKISPKS 499

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
                Y  +I      GL  EA  +   M+   ++P  A + S++ AC   G V+ G L+
Sbjct: 500 QH---YGCMIDLLGRAGLFEEAESLLQNME---VKPDGAIWGSLLGACRDHGRVELGELV 553

Query: 674 FKSMDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAKHVIEI-----MPFQPSPT------V 721
            + +   + ++P +P  Y  L ++ +  G  +D   +        M   P  T      V
Sbjct: 554 AERL---FELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNV 610

Query: 722 YRSLLSGCRIHGNKE----LGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDH 773
               L G ++H   E    + E   E+L +     D + VL    +  +EG L  H
Sbjct: 611 VHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHH 666


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 253/470 (53%), Gaps = 16/470 (3%)

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F+R    DV SWN+L    +   +  ++   F        +PN  TF   ++ C  L 
Sbjct: 40  KYFDRT---DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           DL+ G Q    AL  GF  +  V+S+LI M+ +CG +  A  +FD +  +NI TW  L++
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 422 GYCFNCCDADVLKTF---------CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           GY  N    + L  F          N  E G  V+      V+  C R  N+ +   +HG
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNH 531
             IK G      + ++L+ +Y   G++  S + F + AE+ D+ SW +M++     G + 
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEK-DVVSWNSMIAVYAQNGLST 275

Query: 532 EAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           +A  +FH +++AG  K +E  L T+L +CA  GA +    +H  VIK+G+   V +A+++
Sbjct: 276 DAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSI 335

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y KCG  + AR AFD      +V  +  +I  Y  HG   EA+++F +M  A ++P+
Sbjct: 336 IDMYCKCGQAEMARNAFD-GMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPN 394

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF+SV++ACSH G +++G   F +M  +Y ++P  + YGC+VD+L R GY+++A ++I
Sbjct: 395 YITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLI 454

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + M  +    ++ SLL+ CRIH + EL E ++ +L  L P N   +VLL+
Sbjct: 455 KSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLA 504



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 215/470 (45%), Gaps = 44/470 (9%)

Query: 101 VFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +F++  +R ++ SW  +++   + G+    L+ +  M+     PN       +K C ++ 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G   H  AL    E + FV  ++++ Y+K G ++ A  +F  I   ++  W ++I 
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156

Query: 220 GYAHCGYGFEALNVVSSMLFE---------GITMDKYTFINALQGCSLVADFDIGRQIHG 270
           GY       EAL V    LFE         G ++D    I+ L  CS V++  +   +HG
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           + I+  ++  + + N L+D Y K   +  + KVF+ MA+KDV+SWN++   +++N     
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276

Query: 331 TASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
              +FH  + + G + N VT S LL  C     L +G+ L    +  G+++   + +S+I
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+C+CG  EMA + FD +  KN+ +W  +++GY  +    + L  F  +  +GV+ N  
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  V+  C            H   ++ G+                F  + + +    G 
Sbjct: 397 TFISVLAACS-----------HAGFLEEGWRW--------------FNAMSHEYNVEPGV 431

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           E      +G M+  L   G+  EA  +  S+     + D  + G++L +C
Sbjct: 432 EH-----YGCMVDLLGRAGYIKEAYNLIKSM---KVRRDFVLWGSLLAAC 473



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 179/377 (47%), Gaps = 22/377 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q H   +  GF +D+F+ + LI MYSKCG       +FDE+  RN+V+WT +++  +Q
Sbjct: 101 GKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQ 160

Query: 123 NGEFDMGLKMYVDM---------KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           N +    L ++ +          +  G   +  A+ SV+  C  +        +H  A+K
Sbjct: 161 NDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIK 220

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           + ++K   V  ++L+ YAK G+V+ + +VF  ++  DV  WN+MI  YA  G   +A  V
Sbjct: 221 VGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEV 280

Query: 234 VSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
              ML   G   ++ T    L  C+      +G  +H  +I+     ++ +  ++IDMY 
Sbjct: 281 FHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYC 340

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K    + A   F+ M +K+V SW  +  G+  +    +   +F++ I +G +PN++TF  
Sbjct: 341 KCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFIS 400

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFD 406
           +L  C     L+ G +      H     E NV   + +  C      R G ++ A+++  
Sbjct: 401 VLAACSHAGFLEEGWRWFNAMSH-----EYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455

Query: 407 NVSY-KNITTWNELLSG 422
           ++   ++   W  LL+ 
Sbjct: 456 SMKVRRDFVLWGSLLAA 472



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 213/465 (45%), Gaps = 21/465 (4%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           DV  WN++I   A  G   E+L   S M    I  ++ TF  A++ CS + D + G+Q H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              +    E  + + +ALIDMY K   +  A  +F+ +  +++++W +L  G+ +N +  
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165

Query: 330 QTASLFHKFILSGSRPN---------HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           +   +F +F+   S  N          V    +L  C ++ +  +   +  +A+  G   
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V ++L+  + +CG V ++  VFD+++ K++ +WN +++ Y  N    D  + F  + 
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
           ++G           +   C  E    VG  +H  +IK G+ +   + +S+I  Y   GQ 
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQA 345

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           + +    +G +  ++ SW AM++     G   EA+ +F+ ++ AG KP+     ++L +C
Sbjct: 346 EMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAAC 405

Query: 560 AAIGAYQR-----TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +  G  +          H + ++ G   E Y    ++D   + G IK A           
Sbjct: 406 SHAGFLEEGWRWFNAMSHEYNVEPG--VEHY--GCMVDLLGRAGYIKEAYNLIKSMKVRR 461

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           D +++ +L+ A   H  V E  EI  + +L  L PS   +  +++
Sbjct: 462 DFVLWGSLLAACRIHKDV-ELAEISAR-ELFKLDPSNCGYYVLLA 504



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 3/282 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +   LS    + ++ +   VHG  +K+G    + ++N L+  Y+KCG      +VF
Sbjct: 191 DSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVF 250

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
           D+MAE+++VSW  +++   QNG      +++  M K  G   NE  + +++  C   GA 
Sbjct: 251 DDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGAL 310

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  +H   +K+    N  +  S+++ Y K G    A   F  +   +V  W AMI GY
Sbjct: 311 RVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGY 370

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECS 280
              G+  EAL+V   M++ G+  +  TFI+ L  CS     + G R  + +     VE  
Sbjct: 371 GMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPG 430

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFGG 321
           +     ++D+  ++  +  A+ + + M   +D + W +L   
Sbjct: 431 VEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 292/589 (49%), Gaps = 7/589 (1%)

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           LK  I++  +V  ++++FY KLG    A ++F  + S DV  WN +I GY+  G+  +AL
Sbjct: 70  LKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDAL 129

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            +   ML E    ++ T  + L  C     F  GR +H   I++ +     + NAL  MY
Sbjct: 130 QLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMY 189

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   ++ +  +F+ M +K+VISWNT+ G + +N    +    F + +  G +P+ VT  
Sbjct: 190 AKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMM 249

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            L+          +   + C  + CGF  + +V +SL+ ++ + G  +MA  +++    K
Sbjct: 250 NLMSANA------VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTK 303

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +   ++S Y         ++ F    +  ++ +      V+       +  +    H
Sbjct: 304 DLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFH 363

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G  +K G ++   + + LI  Y  F ++  +           + +W +M+S  V  G + 
Sbjct: 364 GYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSS 423

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           +A+ +F  +   G+KPD   + ++L+ C  +G  +  +++H ++++     E +  +A+I
Sbjct: 424 DAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALI 483

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG +  A   F  S N   ++ +N++I  Y+ +GL  +A   F K++   L+P +
Sbjct: 484 DMYTKCGRLDYAEKIF-YSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDK 542

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF+ V++AC+H GLV  G   F+ M  +YG+ P+   Y C+V +L R G  ++A  +I 
Sbjct: 543 ITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIIN 602

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            M  +P   V+ +LLS C I    +LGE  ++ L LL  KN   +V LS
Sbjct: 603 NMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLS 651



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 139/613 (22%), Positives = 260/613 (42%), Gaps = 40/613 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+   ++K G    +++   LI  Y K G+     ++F+++   ++VSW +++    Q+G
Sbjct: 64  QIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHG 123

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                L+++V M    F PN+  + S++  C        G S+H F +K  +  +P +  
Sbjct: 124 HPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSN 183

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++ + YAK  D+ A++ +F  +   +V  WN MIG Y   G+  +A+     ML EG   
Sbjct: 184 ALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQP 243

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
              T +N      L++   +   +H  II+       S+V +L+ +Y K    D A  ++
Sbjct: 244 SPVTMMN------LMSANAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLY 297

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           E    KD+IS   +   +SE          F + +    +P+ V    +L          
Sbjct: 298 ECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFA 357

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G       L  G  ++  V + LI  + R   +  A S+F + S K + TWN ++SG  
Sbjct: 358 IGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCV 417

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                +D ++ FC +   G + +  T   ++  CC+    ++   +HG I++       +
Sbjct: 418 QAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDF 477

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
             ++LI  Y   G+LD + +         + +W +++S     G  H+A   F  L E G
Sbjct: 478 TGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQG 537

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            +PD+     +L +C            H  ++  G              Y +    +   
Sbjct: 538 LEPDKITFLGVLAACT-----------HGGLVYAGME------------YFRIMRKEYGL 574

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           M   Q         Y  ++      GL  EA+EI + M+   ++P  A + +++SAC  +
Sbjct: 575 MPTLQH--------YACIVGLLGRAGLFKEAIEIINNME---IRPDSAVWGALLSACWIQ 623

Query: 665 GLVDKGCLLFKSM 677
             V  G  L K++
Sbjct: 624 QEVKLGECLAKNL 636



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 204/474 (43%), Gaps = 30/474 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   +K G   D  L N L +MY+KC        +F EM E+N++SW  ++ A  Q
Sbjct: 163 GRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQ 222

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  D  +  + +M   G+ P+   + ++M       A+    ++HC+ +K     +  V
Sbjct: 223 NGFEDKAVLCFKEMLKEGWQPSPVTMMNLMS------ANAVPETVHCYIIKCGFTGDASV 276

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  YAK G    A+ ++    + D+     +I  Y+  G    A+      L   I
Sbjct: 277 VTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDI 336

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D    I+ L G S  + F IG   HG  +++ +     + N LI  Y +   +  A  
Sbjct: 337 KPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALS 396

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F   ++K +I+WN++  G  +         LF +  + G +P+ +T + LL  C +L  
Sbjct: 397 LFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGY 456

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G  L    L      E+   ++LI M+ +CG ++ A  +F +++   + TWN ++SG
Sbjct: 457 LRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISG 516

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS-- 480
           Y     +      F  + E G+E +  TF  V+  C            HG ++  G    
Sbjct: 517 YSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAAC-----------THGGLVYAGMEYF 565

Query: 481 ---SCGYICSSLIKSYV-------NFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
                 Y     ++ Y          G    + E  N  E R D A WGA++SA
Sbjct: 566 RIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSA 619



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 112/218 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   L    +     +G   HG+ +K G TND  + N LI+ YS+       L
Sbjct: 336 IKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAAL 395

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F + +E+ L++W  ++S  +Q G+    ++++  M   G  P+   + S++  C  +G
Sbjct: 396 SLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLG 455

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G ++H + L+  ++   F G ++++ Y K G +  AE++FYSI+   +  WN++I 
Sbjct: 456 YLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIIS 515

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GY+  G   +A    S +  +G+  DK TF+  L  C+
Sbjct: 516 GYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACT 553



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 154/348 (44%), Gaps = 18/348 (5%)

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL---------QLQCLALHCGFLDEENV 384
           +F + + S + PNH+TFS+L++ C                   Q+Q   L  G      V
Sbjct: 21  IFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQFLYV 80

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++LI  + + G    A  +F+++   ++ +WN L+ GY  +    D L+ F ++     
Sbjct: 81  NTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESF 140

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-F 503
             N  T   ++ +C R E       +H   IK G      + ++L   Y     L+ S  
Sbjct: 141 RPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQL 200

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
            F    E+ ++ SW  M+ A    G   +AV  F  +++ G +P    +  ++++ A   
Sbjct: 201 LFQEMGEK-NVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANAV-- 257

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
                +++H ++IK GF  +  V ++++  YAK G    A++ + + + + D+I    +I
Sbjct: 258 ----PETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLY-ECYPTKDLISLTGII 312

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
            +Y+  G V  A+E F +    +++P     +SV+   S       GC
Sbjct: 313 SSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGC 360



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 52/119 (43%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D I +A  LS    L    +G  +HG+I++     + F    LI MY+KCG   +  +
Sbjct: 438 KPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEK 497

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +F  + +  LV+W  I+S     G        +  ++  G  P++     V+  C   G
Sbjct: 498 IFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGG 556


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/611 (25%), Positives = 292/611 (47%), Gaps = 72/611 (11%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           SV+++C    +   G  +H       +  +  +G  +++ YA  GD+    RVF ++   
Sbjct: 104 SVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKK 163

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           +V  WN M+  YA  G                                   DF       
Sbjct: 164 NVYLWNFMVSEYAKIG-----------------------------------DF------- 181

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
                   + SI +   +++  I+    + A ++F+++ D+DVISWN++  G+  N    
Sbjct: 182 --------KESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTE 233

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
           +   ++ + +  G   +  T   +L  C     L LG  +  LA+   F    N +++L+
Sbjct: 234 RGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLL 293

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG ++ A  VF+ +  +N+ +W  +++GY  +      ++    + + GV+++  
Sbjct: 294 DMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVV 353

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
               ++  C RS +      +H  I      S  ++C++L+  Y   G +D +    +  
Sbjct: 354 ATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTM 413

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              D+ SW  M+  L                     KPD   +  IL +CA++ A +R K
Sbjct: 414 VVKDIISWNTMIGEL---------------------KPDSRTMACILPACASLSALERGK 452

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH ++++ G++++ +VA+A++D Y KCG +  AR+ FD    S D++ +  +I  Y  H
Sbjct: 453 EIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM-IPSKDLVSWTVMISGYGMH 511

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G  +EA+  F++M+ A ++P + +F+S++ ACSH GL+++G   F  M + + ++P  + 
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEH 571

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+LSR G L  A   IE +P  P  T++ +LL GCRI+ + EL E  +E++  L 
Sbjct: 572 YACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELE 631

Query: 750 PKNDAAHVLLS 760
           P+N   +VLL+
Sbjct: 632 PENTGYYVLLA 642



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 242/549 (44%), Gaps = 76/549 (13%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGL--------------------RVFDEMAERNLVSWTLIV 117
           +++L N +++ Y+K G F   +                     +FD++ +R+++SW  ++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + NG  + GL++Y  M   G   +   + SV+  C + G    G ++H  A+K   E
Sbjct: 224 SGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFE 283

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           +      ++L+ Y+K GD+  A RVF  +   +V  W +MI GY   G    A+ ++  M
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQM 343

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
             EG+ +D     + L  C+     D G+ +H  I  + +E ++ + NAL+DMY K   M
Sbjct: 344 EKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSM 403

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A  VF  M  KD+ISWNT+ G                       +P+  T + +L  C
Sbjct: 404 DGANSVFSTMVVKDIISWNTMIGEL---------------------KPDSRTMACILPAC 442

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L  L+ G ++    L  G+  + +V ++L+ ++ +CG + +A  +FD +  K++ +W 
Sbjct: 443 ASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++SGY  +    + + TF  + ++G+E +  +F  ++  C            H  +++ 
Sbjct: 503 VMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------HSGLLEQ 551

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G+                F  + N F      E      +  M+  L   G+  +A    
Sbjct: 552 GWRF--------------FYIMKNDFNIEPKLEH-----YACMVDLLSRTGNLSKAYEFI 592

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYA- 595
            +L  A   PD  I G +L  C      +  + +   V +L   NT  YV  A I A A 
Sbjct: 593 ETLPIA---PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649

Query: 596 KCGDIKGAR 604
           K  ++K  R
Sbjct: 650 KWEEVKRMR 658


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 166/604 (27%), Positives = 294/604 (48%), Gaps = 7/604 (1%)

Query: 157  SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            S+ A+     I    +K  I++  +V  ++L+ Y KLG V+ A   F  +   DV  WNA
Sbjct: 454  SLDANTEAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNA 513

Query: 217  MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
            +I GY+  GY F AL +   ML  G    + T +  L  C  +     G+ IHG  I+S 
Sbjct: 514  LICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSG 573

Query: 277  VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
            +     + NAL  MY K   ++ A  +FE M DK V+SWNT+ G + +N    +   +F 
Sbjct: 574  LHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFK 633

Query: 337  KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            + I +G   + VT   L               + C  +  G  D+ +V +SLI M+ R G
Sbjct: 634  RMIGAGVEVSQVTIMSLPSANAN------PESIHCYTIKVGLADDASVVTSLICMYARYG 687

Query: 397  AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            + + A  ++ ++  KN+ +   +++ Y        V+++F  + +  ++ +      ++ 
Sbjct: 688  STDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILH 747

Query: 457  TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                  +  +    HG  IK+G  +   + + LI  Y  F  ++  F   +G     + S
Sbjct: 748  GIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLIS 807

Query: 517  WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
            W +++S  V  G    A+ +F  +   G  PD   + ++L+ C+ +G  Q  + +H +++
Sbjct: 808  WNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYIL 867

Query: 577  KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
            +     E +V +A+I  Y KCG I  A   F +S     +  +N +I  Y+ +G   +A+
Sbjct: 868  RNKLEMEDFVGTALIHMYTKCGSIVHAERVF-KSIGKPCLATWNAMISGYSCYGFEHKAL 926

Query: 637  EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
              + +M+   ++P + TF+ V++AC+H GL+ +G   F+ M   Y M P+     C+V +
Sbjct: 927  TCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGL 986

Query: 697  LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
            L+R G  E+A   I+ M  +P   V+ + LS C IH   +LGE+ ++KL LL  +N   +
Sbjct: 987  LARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLY 1046

Query: 757  VLLS 760
            VL+S
Sbjct: 1047 VLMS 1050



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 220/479 (45%), Gaps = 31/479 (6%)

Query: 63   GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            G  +HG  +K G   D  ++N L +MY+KCG       +F+EM ++++VSW  ++ A  Q
Sbjct: 562  GKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQ 621

Query: 123  NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            NG FD  + ++  M   G    E +  ++M +  +    E   SIHC+ +K+ +  +  V
Sbjct: 622  NGFFDEAMFVFKRMIGAGV---EVSQVTIMSLPSANANPE---SIHCYTIKVGLADDASV 675

Query: 183  GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              S++  YA+ G    AE +++S+   ++    A+I  YA  G     +   S M    +
Sbjct: 676  VTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNM 735

Query: 243  TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
              D    ++ L G +      IG   HG  I+S ++    + N LI MY K + ++  F 
Sbjct: 736  KPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFG 795

Query: 303  VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            +F  M +K +ISWN++  G  +         LF +  + G  P+ +T + LL  C +L  
Sbjct: 796  LFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGY 855

Query: 363  LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
            L  G +L    L      E+ V ++LI+M+ +CG++  A  VF ++    + TWN ++SG
Sbjct: 856  LQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISG 915

Query: 423  YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG---F 479
            Y     +   L  +  + E GVE +  TF  V+  C            HG +I  G   F
Sbjct: 916  YSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACT-----------HGGLIHEGRRYF 964

Query: 480  SSCGYI---------CSSLIKSYVNFGQLDNSFEFSNGAER-LDMASWGAMMSA-LVHQ 527
                 +         C+ ++      G  + +  F    E+  D A WGA +SA  +HQ
Sbjct: 965  QIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQ 1023



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 227/510 (44%), Gaps = 6/510 (1%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           S +L +     Q+  H++K G    +++   L+ +Y K G   +    FD M  R++VSW
Sbjct: 452 SNSLDANTEAIQIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSW 511

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
             ++    +NG     L+++V M   GF P +  +  ++  C  +     G SIH F +K
Sbjct: 512 NALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIK 571

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             +  +P V  ++ + YAK GD+ AAE +F  +    V  WN MIG Y   G+  EA+ V
Sbjct: 572 SGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFV 631

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              M+  G+ + + T +      SL +       IH   I+  +    S+V +LI MY +
Sbjct: 632 FKRMIGAGVEVSQVTIM------SLPSANANPESIHCYTIKVGLADDASVVTSLICMYAR 685

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
               D+A  ++  +  K+++S   +   ++E  N G     F +      +P+ V    +
Sbjct: 686 YGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSI 745

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L      + + +G      A+  G      VT+ LI M+ +   VE    +F  +  K +
Sbjct: 746 LHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPL 805

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +WN ++SG       +  ++ FC +   G   +  T   ++  C +    Q   ++H  
Sbjct: 806 ISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSY 865

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           I++       ++ ++LI  Y   G + ++        +  +A+W AM+S     G  H+A
Sbjct: 866 ILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKA 925

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +T +  + E G +PD+     +L +C   G
Sbjct: 926 LTCYSEMQEQGVEPDKITFLGVLAACTHGG 955



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 51/118 (43%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
            D I +A  LS    L     G ++H +I++     + F+   LI MY+KCG      RV
Sbjct: 838 PDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERV 897

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           F  + +  L +W  ++S     G     L  Y +M+  G  P++     V+  C   G
Sbjct: 898 FKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGG 955


>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/507 (31%), Positives = 262/507 (51%), Gaps = 3/507 (0%)

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+     D G Q+H  II+     +  I  AL+DMY K   +  A KVF+ M+   V++W
Sbjct: 78  CTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTW 137

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N+L  G+ +   P    SLF + +  G  P   + S  L  C +L   DLG QL  ++L 
Sbjct: 138 NSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLK 197

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
             F     V + LI M+ +C  ++ +  VFD +  KN+ TW  ++SGY  N    + +  
Sbjct: 198 LRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXL 257

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +    +E NG T+  ++ +     +     QIH  II  G+ S  YI  +L+ +Y  
Sbjct: 258 MREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSE 317

Query: 496 F-GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G L++  +  +     D  SW A+++   + G   EA+  F  +       D +   +
Sbjct: 318 CCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTS 377

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           I  +     A +  K IH  V K G+   + V + ++  YA+ G I+ ++M F    N +
Sbjct: 378 IFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSM-MNEH 436

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D+I +N+L+   A+HG   EA+++F+KM+   ++P   +F++V++ACSH GL+DKG   F
Sbjct: 437 DLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYF 496

Query: 675 KSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           K M +S+    P  + Y  LVD+  R G L +A+  IE +P +P  ++Y++LLS C IHG
Sbjct: 497 KLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHG 556

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
           NK++    ++KLL L P + A +++LS
Sbjct: 557 NKDIAIRTAKKLLELYPYDPATYIMLS 583



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 259/585 (44%), Gaps = 36/585 (6%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           ++  V +  +G  P    +   + +C      +FG  +H   +K+    NP++  ++++ 
Sbjct: 53  IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K   ++ A +VF  +S   V  WN+++ GY   GY   A+++   ML +GI    ++ 
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              L GCS +   D+G Q+H + ++     ++ +   LIDMY K   +  + +VF+ M +
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLN 232

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           K+V +W ++  G++ N+ P +   L  + +     PN +T++ LL         D   Q+
Sbjct: 233 KNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQI 292

Query: 370 QCLALHCGFLDEENVTSSLIYMFCR-CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
            C  +  G+     +  +L+  +   CG++E    V  N+   +  +WN +++G+     
Sbjct: 293 HCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGI 352

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + L+ F  +     +V+  TF  + +    +   +   QIHG + KTG++    + + 
Sbjct: 353 GEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNG 412

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G + +S    +     D+ SW +++S   + G   EA+ +F  +     KPD
Sbjct: 413 LVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPD 472

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                 +L +C+ +G     K +  F  KL  N+E+ V    ++ YA             
Sbjct: 473 NTSFLAVLTACSHVGLLD--KGLEYF--KLMRNSEL-VEPPKLEHYA------------- 514

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                       TL+  +   G + EA    + +    ++P  + + +++SAC   G  D
Sbjct: 515 ------------TLVDLFGRAGKLYEAEAFIESIP---IEPGISIYKALLSACLIHGNKD 559

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
                 K +   Y   P+   Y  L + L R+GY +DA  +  +M
Sbjct: 560 IAIRTAKKLLELYPYDPA--TYIMLSNALGRDGYWDDAASIRRLM 602



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 210/455 (46%), Gaps = 12/455 (2%)

Query: 15  SCHF-HATRKRIHRLCGNNQFCSDSFLRK--------DPIFLAKSLSLSENLKSRVLGTQ 65
           SCH+ H+    I  L   +      FL +         P  L K++S+         G Q
Sbjct: 30  SCHYTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQ 89

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH  I+KLGF+ + ++   L+ MY KC       +VFDEM+  ++V+W  +V+  +Q G 
Sbjct: 90  VHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGY 149

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             M + ++++M   G  P  F++   +  C  +   + G  +H  +LK+R   N  VG  
Sbjct: 150 PLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTG 209

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K  ++  + RVF  + + +V  W +MI GYA      EA+ ++  ML   +  +
Sbjct: 210 LIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEPN 269

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM--DYAFKV 303
             T+ + L   S    FD  +QIH  II    E +  I   L+  Y +  G   DY  KV
Sbjct: 270 GMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYR-KV 328

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
              +   D ISWN +  GF+      +    F +        +  TF+ + +  G    L
Sbjct: 329 CSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G Q+  L    G+    +V + L+ M+ R GA+  +  VF  ++  ++ +WN LLSG 
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            ++ C  + +  F  +  + ++ +  +F  V+  C
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTAC 483



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           Q+H  I+  G+ ++ ++   L+  YS+C G      +V   +   + +SW  +++     
Sbjct: 291 QIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNL 350

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G  +  L+ ++ M+   F  + F   S+ K      A E G  IH    K     N  V 
Sbjct: 351 GIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQ 410

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
             +++ YA+ G +  ++ VF  ++  D+  WN+++ G A+ G G EA+++   M    I 
Sbjct: 411 NGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 470

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
            D  +F+  L  CS V   D G +   L+  SE+
Sbjct: 471 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSEL 504



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 2/146 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG + K G+T ++ +QN L++MY++ G       VF  M E +L+SW  ++S    
Sbjct: 391 GKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAY 450

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G  +  + ++  M+     P+  +  +V+  C  +G  + G           + + P +
Sbjct: 451 HGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKL 510

Query: 183 G--CSVLNFYAKLGDVAAAERVFYSI 206
               ++++ + + G +  AE    SI
Sbjct: 511 EHYATLVDLFGRAGKLYEAEAFIESI 536


>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 644

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/542 (30%), Positives = 268/542 (49%), Gaps = 22/542 (4%)

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           NAL+  +  A    G+Q+H  +I+      +S+ N ++ +Y+K +  D A K+FE ++ +
Sbjct: 55  NALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELSVR 114

Query: 311 DVISWNTLFGGF-------SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           +V+SWN L  G          + N  Q  S F + +L    P+  TF+ L   C K  D+
Sbjct: 115 NVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDI 174

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           D+G QL C A+  G   +  V S L+ ++ +CG VE A  VF  V ++++  WN ++S Y
Sbjct: 175 DMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCY 234

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             NC   +    F  +   G   +  TF  ++  C   E      Q+HG I++  F S  
Sbjct: 235 ALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDV 294

Query: 484 YICSSLIKSYV-NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            + S+LI  Y  N   +D    F N   R ++ +W  ++    ++   +E + +   ++ 
Sbjct: 295 LVASALINMYAKNENIVDAHRLFDNMVIR-NVVAWNTIIVGYGNRREGNEVMKLLREMLR 353

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PDE  + + ++ C  + A   T   H F +K  F   + VA+++I AY+KCG I  
Sbjct: 354 EGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITS 413

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F  +    D++ + +LI AYA HGL  EA E+F+KM    + P Q +F+ V+SACS
Sbjct: 414 ACKCFRLT-REPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACS 472

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLV KG   F  M S Y + P    Y CLVD+L R G + +A   +  MP +      
Sbjct: 473 HCGLVTKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTL 532

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS------------KRKRQREGNL 770
            + ++ C +H N  L +WA+EKL  + P+ +  + ++S            +R R+  GN 
Sbjct: 533 GAFVASCNLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNK 592

Query: 771 LD 772
            D
Sbjct: 593 CD 594



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 234/480 (48%), Gaps = 20/480 (4%)

Query: 42  KDP----IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           +DP    +F A +L +S        G Q+H H++K GF + + LQN ++ +Y KC     
Sbjct: 44  RDPHTVHLFCANALKVSAKRALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADD 103

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG-------LKMYVDMKTNGFMPNEFAVGS 150
             ++F+E++ RN+VSW +++   +  G+ +            +  M     +P+      
Sbjct: 104 AEKLFEELSVRNVVSWNILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNG 163

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +  VCV     + G+ +HCFA+K+ ++ + FVG  +++ YA+ G V  A RVF  +   D
Sbjct: 164 LFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRD 223

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           +  WN MI  YA      EA  + + M ++G   D++TF N L  C  +  +D G+Q+HG
Sbjct: 224 LVVWNVMISCYALNCLPEEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHG 283

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I+R   +  + + +ALI+MY K+  +  A ++F+ M  ++V++WNT+  G+   +   +
Sbjct: 284 HILRLSFDSDVLVASALINMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNE 343

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              L  + +  G  P+ +T S  +  CG +  +   +Q    A+   F +  +V +SLI 
Sbjct: 344 VMKLLREMLREGFSPDELTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLIS 403

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
            + +CG++  A   F      ++ +W  L++ Y F+    +  + F  +   G+  +  +
Sbjct: 404 AYSKCGSITSACKCFRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQIS 463

Query: 451 FFYVVETCCRSENQQMVGQIH-----GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
           F  V+  C  S    +   +H      ++ K    S  Y C  L+     +G ++ +FEF
Sbjct: 464 FLGVLSAC--SHCGLVTKGLHYFNLMTSVYKIVPDSGHYTC--LVDLLGRYGLINEAFEF 519


>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 661

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/576 (27%), Positives = 293/576 (50%), Gaps = 16/576 (2%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD   ++++V    ++    +N      + ++V +  +  + +   +  V+K C  +  
Sbjct: 52  VFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACLSC 111

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            +FG  +H + +K    ++  VG S+++ Y K   V   +RVF  +   +V  W +++ G
Sbjct: 112 KKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVG 171

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTF---INALQGCSLVADFDIGRQIHGLIIRSEV 277
           YAH G   EAL     M    I  + +TF   + AL     +A  D G QIH ++I++  
Sbjct: 172 YAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIA--DKGVQIHTMVIKNGF 229

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E +I + N+LI+MY KS  +  A  VF+ M  +D ISWN++  G+  N    +   +F+ 
Sbjct: 230 EATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYH 289

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             L+G +  +  FS +++ C  + +L    QL    L  GF  + N+ ++L+  + +   
Sbjct: 290 LRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGRE 349

Query: 398 VEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           ++ A  +F  +   +N+ +W  ++SG+  N      +  FC +   GV  N  TF  ++ 
Sbjct: 350 IDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILA 409

Query: 457 TCCRSENQQMVG--QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
                  Q +V   ++H  +IK+ +     + ++L+ +YV  G L+ + +     +  D+
Sbjct: 410 A------QPVVSPFEVHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDI 463

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA-IGAYQRTKSIHP 573
            +W AM++     G    AV I   + + G +P+EY   +++N+C A   A ++ K  H 
Sbjct: 464 VAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHA 523

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           + IK  FN  + V+SA++  YAK G+I+ A   F +     D++ +N+++  YA HG   
Sbjct: 524 WSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQ-GVRDLVSWNSMVSGYAQHGHAR 582

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +A+E+F +M+  NL+    TF+ V+SAC+H GLVD+
Sbjct: 583 KALEVFKEMQDQNLELDGVTFIGVISACTHAGLVDE 618



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 244/510 (47%), Gaps = 7/510 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L  +  G QVH + VK GF  DI +  +L+ MY K  Y   G RVFDEM ERN+VSWT +
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSL 168

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV-SMGASEFGYSIHCFALKIR 175
           +     NG     L+ + +M+     PN F   +V+     S   ++ G  IH   +K  
Sbjct: 169 LVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNG 228

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            E   FV  S++N Y+K G V  A+ VF ++ + D   WN+M+ GY   G   EA+ +  
Sbjct: 229 FEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFY 288

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +   G+ +  + F + ++ C+ + +    RQ+HG +++   E   +I  AL+  Y K  
Sbjct: 289 HLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGR 348

Query: 296 GMDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            +D AFK+F  M   ++V+SW  +  G  +N    Q  +LF +    G RPN  TFS +L
Sbjct: 349 EIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTIL 408

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
                +   ++  Q+    +   +    +V ++L+  + + G +  A  VF+ +  K+I 
Sbjct: 409 AAQPVVSPFEVHAQV----IKSDYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIV 464

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIHGA 473
            W+ +++GY         +K    + + GVE N  TF  V+  C         G Q H  
Sbjct: 465 AWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAW 524

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            IK+ F+    + S+L+  Y   G+++++ E        D+ SW +M+S     GH  +A
Sbjct: 525 SIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKA 584

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           + +F  + +   + D      ++++C   G
Sbjct: 585 LEVFKEMQDQNLELDGVTFIGVISACTHAG 614



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 138/541 (25%), Positives = 268/541 (49%), Gaps = 14/541 (2%)

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+ VF      DV   N ++  Y+      E +N+  ++    +  D  T    L+ C+ 
Sbjct: 49  AQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACAC 108

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           ++    G Q+H   ++S     IS+  +L+DMY+KS  ++   +VF+ M +++V+SW +L
Sbjct: 109 LSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSL 168

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD----LDLGLQLQCLAL 374
             G++ N    +    F +      +PN  TF+ +L   G L D     D G+Q+  + +
Sbjct: 169 LVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVL---GALADSKAIADKGVQIHTMVI 225

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             GF     V +SLI M+ + G V+ A +VFDN+  ++  +WN +++GY  N    + ++
Sbjct: 226 KNGFEATIFVCNSLINMYSKSGMVKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIE 285

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F ++  +GV++    F  V+++C   +      Q+HG ++K GF     I ++L+ +Y 
Sbjct: 286 MFYHLRLAGVKLTNFIFSSVIKSCANIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYN 345

Query: 495 NFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              ++D++F+ FS      ++ SW A++S  +  G   +AV +F  +   G +P++Y   
Sbjct: 346 KGREIDDAFKIFSMMYGIRNVVSWTAIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFS 405

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           TIL +   +  ++    +H  VIK  +     V +A++DAY K G++  A   F++  + 
Sbjct: 406 TILAAQPVVSPFE----VHAQVIKSDYEKSPSVGTALLDAYVKLGNLNEASKVFER-IDD 460

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLL 673
            D++ ++ ++  YA  G    A++I  +M    ++P++ TF SV++AC+      +    
Sbjct: 461 KDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQ 520

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F +   +     +      LV M ++ G +E A  V      +   + + S++SG   HG
Sbjct: 521 FHAWSIKSRFNDALCVSSALVTMYAKRGEIESANEVFRRQGVRDLVS-WNSMVSGYAQHG 579

Query: 734 N 734
           +
Sbjct: 580 H 580



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 165/329 (50%), Gaps = 22/329 (6%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM-AERNLVSWT 114
           N+K      Q+HG ++K GF  D  ++  L+  Y+K        ++F  M   RN+VSWT
Sbjct: 311 NIKELGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWT 370

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            I+S  +QNG  +  + ++ +M   G  PN++   +++     +      + +H   +K 
Sbjct: 371 AIISGHLQNGLAEQAVNLFCEMSREGVRPNDYTFSTILAAQPVVSP----FEVHAQVIKS 426

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             EK+P VG ++L+ Y KLG++  A +VF  I   D+  W+AM+ GYA  G    A+ ++
Sbjct: 427 DYEKSPSVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKIL 486

Query: 235 SSMLFEGITMDKYTFINALQGCSL-VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             M  +G+  ++YTF + +  C+   A  + G+Q H   I+S    ++ + +AL+ MY K
Sbjct: 487 IQMAKKGVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAK 546

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              ++ A +VF R   +D++SWN++  G++++ +  +   +F +        + VTF  +
Sbjct: 547 RGEIESANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLELDGVTFIGV 606

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           +  C                 H G +DEE
Sbjct: 607 ISAC----------------THAGLVDEE 619



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 2/265 (0%)

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           +A +VFD    +++   N LL  Y  N    +V+  F  I  S +  +G T   V++ C 
Sbjct: 48  IAQNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACA 107

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
               ++   Q+H   +K+GF     + +SL+  Y+    ++      +  E  ++ SW +
Sbjct: 108 CLSCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTS 167

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY-QRTKSIHPFVIKL 578
           ++    H G N EA+  F  +     KP+ +   T+L + A   A   +   IH  VIK 
Sbjct: 168 LLVGYAHNGLNMEALECFFEMQAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKN 227

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF   ++V +++I+ Y+K G +K A+  FD +  + D I +N+++  Y  +GL  EA+E+
Sbjct: 228 GFEATIFVCNSLINMYSKSGMVKNAKAVFD-NMVTRDAISWNSMVAGYVANGLYLEAIEM 286

Query: 639 FDKMKLANLQPSQATFVSVMSACSH 663
           F  ++LA ++ +   F SV+ +C++
Sbjct: 287 FYHLRLAGVKLTNFIFSSVIKSCAN 311


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 315/644 (48%), Gaps = 24/644 (3%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG--CWNAMIGGY 221
           G ++H   LK     + +V  + LN YAK   ++ A  +F SI+ +D     WN++I  +
Sbjct: 30  GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 222 AHCGYGFEALNVVS----SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +       +   +S     M    +  + +T        S ++D   G+Q H + +++  
Sbjct: 90  SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGC 149

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              + + ++L++MY K+  +  A K+F+RM +++ +SW T+  G++ +    +   +F  
Sbjct: 150 SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFEL 209

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
                   N    + +L      + +  G Q+  LA+  G L   +V ++L+ M+ +CG+
Sbjct: 210 MRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGS 269

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV-- 455
           ++ A   F+    KN  TW+ +++GY         LK F  +  SGV  +  T   V+  
Sbjct: 270 LDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINA 329

Query: 456 --ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
             + C   E +QM    H    K GF    Y+ S+++  Y   G L ++ +     ++ D
Sbjct: 330 CSDLCAVVEGKQM----HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD 385

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           +  W ++++  V  G     + ++  +      P+E  + ++L +C+++ A  + K +H 
Sbjct: 386 VVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHA 445

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            +IK GF  EV + SA+   Y KCG +    + F     S DVI +N +I   + +G  +
Sbjct: 446 RIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIF-WRMPSRDVISWNAMISGLSQNGHGN 504

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           +A+E+F+KM L  ++P   TFV+++SACSH GLVD+G   FK M  ++ + P  + Y C+
Sbjct: 505 KALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACM 564

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           VD+LSR G L +AK  IE         ++R LL  C+ H N ELG +A EKL+ L     
Sbjct: 565 VDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPES 624

Query: 754 AAHVLLS--------KRKRQREGNLLDHEGVCNVNDGIKTVDLK 789
           +A+VLLS        +   +R   ++   GV N   G   ++LK
Sbjct: 625 SAYVLLSSIYTALGDRENVERVRRIMKARGV-NKEPGCSWIELK 667



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 160/645 (24%), Positives = 289/645 (44%), Gaps = 21/645 (3%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTL 115
           K+ + G  +H  I+K G  + I++ N  + +Y+K  +    L +FD + +  ++ VSW  
Sbjct: 25  KNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNS 84

Query: 116 IVSAAIQN-----GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +++A  QN       F + L   + M+ N  +PN   +  V     ++     G   H  
Sbjct: 85  LINAFSQNHSSSSSSFAISLFRRM-MRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSV 143

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           A+K     + +VG S+LN Y K G V  A ++F  +   +   W  MI GYA      +A
Sbjct: 144 AVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKA 203

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           + V   M  E    +++   + L   +       GRQ+H L I++ +   +S+ NAL+ M
Sbjct: 204 VEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTM 263

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +D A + FE   DK+ I+W+ +  G+++  +  +   LF+K   SG  P+  T 
Sbjct: 264 YAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTL 323

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             ++  C  L  +  G Q+   A   GF  +  V S+++ M+ +CG++  A   F+ V  
Sbjct: 324 VGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQ 383

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
            ++  W  +++GY  N      L  +  +    V  N  T   V+  C          Q+
Sbjct: 384 PDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQM 443

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  IIK GF     I S+L   Y   G LD+ +         D+ SW AM+S L   GH 
Sbjct: 444 HARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHG 503

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--S 588
           ++A+ +F  ++  G KPD      +L++C+ +G   R       +    FN    V   +
Sbjct: 504 NKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFD-EFNIAPMVEHYA 562

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL- 647
            ++D  ++ G +  A+   + +   + + ++  L+ A  +H   +  + ++   KL  L 
Sbjct: 563 CMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHR--NYELGVYAGEKLVELG 620

Query: 648 QPSQATFV---SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            P  + +V   S+ +A   +  V++   + K+     G+   P C
Sbjct: 621 SPESSAYVLLSSIYTALGDRENVERVRRIMKA----RGVNKEPGC 661



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 202/412 (49%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           LA   S + NL   V G Q H   VK G + D+++ ++L+ MY K G+     ++FD M 
Sbjct: 121 LAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP 180

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ERN VSW  ++S    +   D  ++++  M+    + NEFA+ SV+    S      G  
Sbjct: 181 ERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQ 240

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H  A+K  +     V  +++  YAK G +  A R F      +   W+AM+ GYA  G 
Sbjct: 241 VHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGD 300

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +AL + + M   G+   ++T +  +  CS +     G+Q+H    +      + +++A
Sbjct: 301 SDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSA 360

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++DMY K   +  A K FE +   DV+ W ++  G+ +N +     +L+ K  +    PN
Sbjct: 361 VVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPN 420

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +T + +LR C  L  LD G Q+    +  GF  E  + S+L  M+ +CG+++  + +F 
Sbjct: 421 ELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFW 480

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +  +++ +WN ++SG   N      L+ F  +   G++ +  TF  ++  C
Sbjct: 481 RMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSAC 532



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 63/123 (51%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + +A  L    +L +   G Q+H  I+K GF  ++ + + L AMY+KCG    G  +F
Sbjct: 420 NELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIF 479

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M  R+++SW  ++S   QNG  +  L+++  M   G  P+     +++  C  MG  +
Sbjct: 480 WRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVD 539

Query: 163 FGY 165
            G+
Sbjct: 540 RGW 542


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 145/523 (27%), Positives = 261/523 (49%), Gaps = 51/523 (9%)

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ++  +KS  +  A  +F+RM  K+V++W ++  G + N  P    ++F   + SG  PN 
Sbjct: 55  LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
              +  L  C  L  L  G Q+  LA+  GF  +  + S LI M+ RCG++  A  VFD 
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +   ++  +  L+S +C N       +    + + G++ N  T   ++  C R   QQ+ 
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234

Query: 468 G--------------------------------------------------QIHGAIIKT 477
           G                                                  Q+H + IK 
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKH 294

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
              +   + ++L+  Y   G ++      N  E  D+ SW   +SA    G   +A+ + 
Sbjct: 295 DLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALL 354

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +   G  P+ Y   ++L+SCA + +  +    H   +KLG ++E+   +A+I+ Y+KC
Sbjct: 355 CQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKC 414

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G +  AR+AFD   +++DV  +N+LI  +A HG  ++A+E+F KM+   ++P  +TF+ V
Sbjct: 415 GQMGSARLAFD-VMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGV 473

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           +  C+H G+V++G L F+ M  QY   P+P  Y C++DML RNG  ++A  +I  MPF+P
Sbjct: 474 LMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEP 533

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              ++++LL+ C++H N ++G+ A+++L+ L  ++ A++VL+S
Sbjct: 534 DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMS 576



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 192/437 (43%), Gaps = 58/437 (13%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           + D+ L+   +    K G     L +FD M  +N+V+WT ++S   +NG  +  L M+ D
Sbjct: 45  SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFAD 104

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M  +G  PN+FA  + +  C  +GA   G  +H  A++     + ++G  ++  Y++ G 
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGS 164

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + AA+ VF  + S DV  + ++I  +   G    A   +  ML +G+  +++T    L  
Sbjct: 165 LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTA 224

Query: 256 CSLVADFDIGRQIHGLIIRS---------------------------------------- 275
           C  V    +G+QIHG +I+                                         
Sbjct: 225 CPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGS 280

Query: 276 -----EVECS---------ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
                ++ CS         I + NAL+ MY ++  ++    +  ++ + D++SW T    
Sbjct: 281 IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISA 340

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
             +N    +  +L  +    G  PN   FS +L  C  +  LD G+Q  CLAL  G   E
Sbjct: 341 NFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSE 400

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
               ++LI M+ +CG +  A   FD +   ++T+WN L+ G+  +      L+ F  +  
Sbjct: 401 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 460

Query: 442 SGVEVNGCTFFYVVETC 458
           +G++ +  TF  V+  C
Sbjct: 461 NGIKPDDSTFLGVLMGC 477



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 179/414 (43%), Gaps = 58/414 (14%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G QVH   V+ GF  D ++ + LI MYS+CG       VFD M   ++V +T ++SA  +
Sbjct: 133 GEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCR 192

Query: 123 NGEFDMGLKMYVDM---------------------------------------------- 136
           NGEF++  +  + M                                              
Sbjct: 193 NGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSST 252

Query: 137 -------KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
                  +  G  PNEFA+  V+  C S+G    G  +HC A+K  +  +  V  ++L+ 
Sbjct: 253 ALIDFYSRNEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSM 309

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y + G V   E +   I + D+  W   I      G+G +A+ ++  M  EG T + Y F
Sbjct: 310 YGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAF 369

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
            + L  C+ VA  D G Q H L ++   +  I   NALI+MY K   M  A   F+ M  
Sbjct: 370 SSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHT 429

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG-LQ 368
            DV SWN+L  G +++ +  +   +F K   +G +P+  TF  +L  C     ++ G L 
Sbjct: 430 HDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELF 489

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLS 421
            + +     F    +  + +I M  R G  + A  + +++ ++ +   W  LL+
Sbjct: 490 FRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 543



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 2/268 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H   +K     DI + N L++MY + G       + +++   +LVSWT  +SA  
Sbjct: 283 LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANF 342

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  + +   M + GF PN +A  SV+  C  + + + G   HC ALK+  +    
Sbjct: 343 QNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEIC 402

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G +++N Y+K G + +A   F  + + DV  WN++I G+A  G   +AL V S M   G
Sbjct: 403 TGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG 462

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVNALIDMYIKSSGMDYA 300
           I  D  TF+  L GC+     + G     L+I +     + S    +IDM  ++   D A
Sbjct: 463 IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEA 522

Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKN 327
            ++   M  + D + W TL      ++N
Sbjct: 523 LRMINDMPFEPDALIWKTLLASCKLHRN 550



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   ++ S   G Q H   +KLG  ++I   N LI MYSKCG  G     FD M   ++
Sbjct: 373 LSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDV 432

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            SW  ++    Q+G+ +  L+++  M++NG  P++     V+  C   G  E G      
Sbjct: 433 TSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE----L 488

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             ++ I++  F      + YA                     C   M+G     G   EA
Sbjct: 489 FFRLMIDQYSFT--PAPSHYA---------------------CMIDMLG---RNGRFDEA 522

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +++ M FE    D   +   L  C L  + DIG+     ++      S S V  + ++
Sbjct: 523 LRMINDMPFEP---DALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYV-LMSNI 578

Query: 291 YIKSSGMDYAFKVFERMADKDV 312
           Y      + A KV  RM +  V
Sbjct: 579 YAMHGEWEDARKVRRRMDETGV 600


>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
          Length = 518

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 233/471 (49%), Gaps = 36/471 (7%)

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   MD A KVFE +    ++SWN L  GF +  +  +   +      +G  PN VT
Sbjct: 1   MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           +S LL  C K  D                                   V  A ++FD +S
Sbjct: 61  YSNLLASCIKARD-----------------------------------VHSARAMFDKIS 85

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
             ++TTWN LLSGYC      D ++ F  +    V+ +  T   ++ +C +        Q
Sbjct: 86  RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQ 145

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H A ++    +  ++ S L+  Y   GQ+  +    N     D+  W +++S L     
Sbjct: 146 VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL 205

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           N EA   F  + E G  P E    +++NSC+ + +    + IH  V+K G++  VYV SA
Sbjct: 206 NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 265

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCG++  AR+ FD     N ++ +N +I  YA +GL  +A+E+F+ M     +P
Sbjct: 266 LIDMYAKCGNMDDARLFFDTMMMKN-IVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKP 324

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TF++V++ CSH GLVDK    F SM++ YG+ P  + Y CL+D L R G   + + +
Sbjct: 325 DAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEAL 384

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           I  MP +  P ++  LL+ C +H N ELG+ A+E L  + PKN + +VLLS
Sbjct: 385 IHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLS 435



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 162/374 (43%), Gaps = 35/374 (9%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY+KC      ++VF+ +    +VSW ++++   Q G     +++   M+  GF PNE  
Sbjct: 1   MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
             +++  C+                                   K  DV +A  +F  IS
Sbjct: 61  YSNLLASCI-----------------------------------KARDVHSARAMFDKIS 85

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
              V  WN ++ GY       + + +   M  + +  D+ T    L  CS +   D GRQ
Sbjct: 86  RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQ 145

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H   +R  +   + + + L+DMY K   +  A  +F +M ++DV+ WN++  G + +  
Sbjct: 146 VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL 205

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             +    F +   +G  P   +++ ++  C +L  +  G Q+    +  G+     V S+
Sbjct: 206 NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 265

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI M+ +CG ++ A   FD +  KNI  WNE++ GY  N      ++ F  +  +  + +
Sbjct: 266 LIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPD 325

Query: 448 GCTFFYVVETCCRS 461
             TF  V+  C  S
Sbjct: 326 AVTFIAVLTGCSHS 339



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 190/443 (42%), Gaps = 37/443 (8%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y K  ++  A +VF S+ S  +  WN +I G+   G   +A+ V+S M   G   ++ T
Sbjct: 1   MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           + N L  C                                   IK+  +  A  +F++++
Sbjct: 61  YSNLLASC-----------------------------------IKARDVHSARAMFDKIS 85

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
              V +WNTL  G+ + +    T  LF +      +P+  T +++L  C KL  LD G Q
Sbjct: 86  RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQ 145

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +   ++     ++  V S L+ M+ +CG + +A S+F+ ++ +++  WN ++SG   +  
Sbjct: 146 VHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSL 205

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           + +    F  + E+G+     ++  ++ +C R  +     QIH  ++K G+    Y+ S+
Sbjct: 206 NKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSA 265

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           LI  Y   G +D++  F +     ++ +W  M+      G   +AV +F  ++   +KPD
Sbjct: 266 LIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPD 325

Query: 549 EYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
                 +L  C+  G   +  +  +      G        + +IDA  + G         
Sbjct: 326 AVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALI 385

Query: 608 DQSFNSNDVIVYNTLIMA-YAHH 629
            +    +D I++  L+ A   HH
Sbjct: 386 HKMPCKDDPIIWEVLLAACVVHH 408



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 140/284 (49%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF  +    +NL+A   K         +FD+++  ++ +W  ++S   Q  +    ++++
Sbjct: 53  GFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELF 112

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             M+     P+   +  ++  C  +G  +FG  +H  +++  +  + FV   +++ Y+K 
Sbjct: 113 RRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKC 172

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +  A  +F  ++  DV CWN++I G        EA +    M   GI   + ++ + +
Sbjct: 173 GQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMI 232

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             CS ++    GRQIH  +++   + ++ + +ALIDMY K   MD A   F+ M  K+++
Sbjct: 233 NSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIV 292

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           +WN +  G+++N    +   LF   + +  +P+ VTF  +L  C
Sbjct: 293 AWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGC 336



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 109/218 (50%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D   LA  LS    L     G QVH   V+    ND+F+ + L+ MYSKCG  G   
Sbjct: 120 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 179

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F++M ER++V W  I+S    +         +  M+ NG MP E +  S++  C  + 
Sbjct: 180 SIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLS 239

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           +   G  IH   +K   ++N +VG ++++ YAK G++  A   F ++   ++  WN MI 
Sbjct: 240 SIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIH 299

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GYA  G G +A+ +   ML      D  TFI  L GCS
Sbjct: 300 GYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCS 337



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L S   G Q+H  ++K G+  ++++ + LI MY+KCG        FD M  +N+V+W  +
Sbjct: 238 LSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEM 297

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +    QNG  D  ++++  M T    P+     +V+  C   G
Sbjct: 298 IHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSG 340


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 170/649 (26%), Positives = 318/649 (48%), Gaps = 4/649 (0%)

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           S+  +VS     G     L+ Y+ M+      + +   S+ K C ++     G S+H   
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +   +  + ++G S+++FYAK G +    +VF ++   +V  W  +IG Y+  G    A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M   GI     T ++ L G   ++   +   +H LII    E  +++ N++++MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A ++FE +  +D++SWN+L   +S+     +   L     +   +P+  TF 
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
             L       DL LG  +  L L  G   +++V S+L+ ++ RC  ++ A+ VF + + K
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++  W  ++SG   N C    L  F  + ES V+ +  T    +  C +     +   IH
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G +++ G        +SL+  Y    +L  S    N     D+ SW A+++     G+  
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           + +  F+ + ++  +PD   + ++L +C + GA  + K IH FV++      +   +A++
Sbjct: 433 KGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALV 492

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG+++ A+  FD      D++ ++TLI+ Y  +G    A+  + +     ++P+ 
Sbjct: 493 DMYFKCGNLENAQKCFDCMLQ-RDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             F+SV+SACSH GL+ KG  +++SM   + M P+ +   C+VD+LSR G +++A    +
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +M  +PS  V   LL  CR++G  ELG+  +  +  L P +    V L+
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/573 (23%), Positives = 280/573 (48%), Gaps = 8/573 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +V  G ++D ++ ++LI+ Y+K G    G +VFD M +RN+V WT I+ +  +
Sbjct: 68  GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSR 127

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR--IEKNP 180
            G+ D+   M+  M+ +G  P    + S++      G S+    +    L I    E + 
Sbjct: 128 EGDIDIAFSMFKQMRESGIQPTSVTLLSLLP-----GISKLPLLLCLHCLIILHGFESDL 182

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S++N Y K G +A A R+F SI   D+  WN+++  Y+  G   E L ++ +M  E
Sbjct: 183 ALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIE 242

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I  DK TF +AL   ++  D  +G+ +HGL+++  +     + +AL+ +Y++   +D A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +KVF+   +KDV+ W  +  G  +N    +   +F++ I S  +P+  T +  L  C +L
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              D+G  +    L  G + +    +SL+ M+ +C  ++ + S+F+ +  K++ +WN ++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G+  N   +  +  F  + +S +  +  T   +++ C  +        IH  ++++   
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            C    ++L+  Y   G L+N+ +  +   + D+ +W  ++      G    A+  +   
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
           +  G +P+  I  ++L++C+  G   +  SI+  + K    +  +   + V+D  ++ G 
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGK 602

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
           +  A   +   F    ++V   L+ A   +G V
Sbjct: 603 VDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRV 635



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 219/498 (43%), Gaps = 33/498 (6%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF +D+ L N+++ MY KCG      R+F+ +  R++VSW  ++SA  + G  +  L++ 
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             MK     P++    S +      G    G  +H   LK  +  +  V  +++  Y + 
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
             +  A +VF S +  DV  W AMI G        +AL V   M+   +     T  + L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C+ +   DIG  IHG ++R  +   I   N+L+ MY K + +  +  +F +M +KD++
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SWN +  G ++N    +    F++   S  RP+ +T + LL+ CG    L  G  +    
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           L    +      ++L+ M+ +CG +E A   FD +  +++  W+ L+ GY FN      L
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + +     +G+E N   F  V+  C            HG +I  G S    I  S+ K +
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACS-----------HGGLISKGLS----IYESMTKDF 581

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
                L++                  ++  L   G   EA + +  +    ++P   +LG
Sbjct: 582 RMSPNLEHR---------------ACVVDLLSRAGKVDEAYSFYKMMF---KEPSIVVLG 623

Query: 554 TILNSCAAIGAYQRTKSI 571
            +L++C   G  +  K I
Sbjct: 624 MLLDACRVNGRVELGKVI 641



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 11/372 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D      +LS S       LG  VHG ++K G   D  +++ L+ +Y +C       
Sbjct: 244 IKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAY 303

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF    E+++V WT ++S  +QN   D  L ++  M  +   P+   + S +  C  +G
Sbjct: 304 KVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLG 363

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G SIH + L+  I  +     S++  YAK   +  +  +F  +   D+  WNA++ 
Sbjct: 364 CCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVA 423

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+A  GY  + +   + M    +  D  T  + LQ C        G+ IH  ++RS +  
Sbjct: 424 GHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIP 483

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            I    AL+DMY K   ++ A K F+ M  +D+++W+TL  G+  N         + +F+
Sbjct: 484 CIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFL 543

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------ 393
            +G  PNHV F  +L  C        GL  + L+++     +  ++ +L +  C      
Sbjct: 544 GTGMEPNHVIFISVLSACSH-----GGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLS 598

Query: 394 RCGAVEMAHSVF 405
           R G V+ A+S +
Sbjct: 599 RAGKVDEAYSFY 610



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 132/272 (48%), Gaps = 1/272 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++     LA  L+    L    +G  +HG++++ G   DI  QN+L+ MY+KC    
Sbjct: 342 ESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQ 401

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F++M E++LVSW  IV+   +NG    G+  + +M+ +   P+   V S+++ C 
Sbjct: 402 QSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACG 461

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S GA   G  IH F L+  +        ++++ Y K G++  A++ F  +   D+  W+ 
Sbjct: 462 SAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWST 521

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS- 275
           +I GY   G G  AL   S  L  G+  +   FI+ L  CS       G  I+  + +  
Sbjct: 522 LIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDF 581

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
            +  ++     ++D+  ++  +D A+  ++ M
Sbjct: 582 RMSPNLEHRACVVDLLSRAGKVDEAYSFYKMM 613



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 25/211 (11%)

Query: 521 MSALVH--------------------QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           MS L+H                    QG +H+ +  + S+ +   + D Y   ++  +C 
Sbjct: 1   MSGLIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACT 60

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            +  +    S+H  V+  G + + Y+ S++I  YAK G I   R  FD     N V+ + 
Sbjct: 61  NLNLFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRN-VVPWT 119

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           T+I +Y+  G +  A  +F +M+ + +QP+  T +S++   S   L+         +   
Sbjct: 120 TIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC----LHCLIIL 175

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           +G +        +V+M  + G + DA+ + E
Sbjct: 176 HGFESDLALSNSMVNMYGKCGRIADARRLFE 206


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/516 (29%), Positives = 260/516 (50%), Gaps = 11/516 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +H L + S       + +AL  +Y   S  + A KVF+ +   D + WNTL  G S +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202

Query: 326 KNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
               +    F +   +GS RP+  T + +L    ++ +  +G  +      CG    E+V
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            + LI ++ +CG +E A  +FD +   ++ T+N L+SGY  N      ++ F  +   G+
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   ++       ++ + G +H  ++K G  +   + ++L   Y  F  +D++  
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARR 378

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +      M SW AM+S     G    AV +F  +     +P+   + + L++CA +GA
Sbjct: 379 AFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGA 438

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
               K +H  +        VYV +A+ID Y KCG I  AR  FD S ++ +V+ +N +I 
Sbjct: 439 LSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFD-SMDNKNVVSWNVMIS 497

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            Y  HG  +EA++++  M  A+L P+ +TF+SV+ ACSH GLV +G  +F+SM S YG+ 
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP-SPTVYRSLLSGCRIHGNKELGEWASE 743
           P  +   C+VD+L R G L++A  +I   P     P ++ +LL  C +H + +L + AS+
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQ 617

Query: 744 KLLLLLPKNDAAHVLLS----KRKRQREGNLLDHEG 775
           KL  L P+N   +VLLS     +K+  E  ++  E 
Sbjct: 618 KLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEA 653



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 148/318 (46%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA  L  +  + +  +G  VH    K G      +   LI++Y+KCG      
Sbjct: 217 VRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECAR 276

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD M   +LV++  ++S    NG     ++++ ++   G  P+   + +++ V    G
Sbjct: 277 HLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFG 336

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  +H   +K  ++ N  V  ++   Y +  D+ +A R F ++    +  WNAMI 
Sbjct: 337 HEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMIS 396

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G    A+ +   M    +  +  T  +AL  C+ +    +G+ +H +I   ++E 
Sbjct: 397 GYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLEL 456

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ ++ ALIDMY+K   +  A  +F+ M +K+V+SWN +  G+  +    +   L+   +
Sbjct: 457 NVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMM 516

Query: 340 LSGSRPNHVTFSILLRQC 357
            +   P   TF  +L  C
Sbjct: 517 DAHLHPTSSTFLSVLYAC 534



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/466 (22%), Positives = 189/466 (40%), Gaps = 12/466 (2%)

Query: 146 FAVGSVMKVCVSMG------ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           FA  S+   C   G      AS     +H  A+      + FV  ++   Y  L     A
Sbjct: 118 FAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDA 177

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSL 258
            +VF ++ S D   WN ++ G +    G EAL     M   G +  D  T  + L   + 
Sbjct: 178 RKVFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAE 233

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           VA+  +GR +H    +  +     +V  LI +Y K   M+ A  +F+RM   D++++N L
Sbjct: 234 VANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNAL 293

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G+S N   G +  LF + +  G RP+  T   L+          L   L    +  G 
Sbjct: 294 ISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGL 353

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                V+++L  ++CR   ++ A   FD +  K + +WN ++SGY  N      +  F  
Sbjct: 354 DANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQ 413

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +    V  N  T    +  C +     +   +H  I         Y+ ++LI  YV  G 
Sbjct: 414 MQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGS 473

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +  +    +  +  ++ SW  M+S     G   EA+ ++  +++A   P      ++L +
Sbjct: 474 IAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYA 533

Query: 559 CAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           C+  G  +   ++        G    +   + ++D   + G +K A
Sbjct: 534 CSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEA 579



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 92/192 (47%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H H+VK G   +  +   L  +Y +        R FD M E+ + SW  ++S   QNG 
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGL 403

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            +M + ++  M+     PN   + S +  C  +GA   G  +H      ++E N +V  +
Sbjct: 404 TEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTA 463

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y K G +A A  +F S+ + +V  WN MI GY   G G EAL +   M+   +   
Sbjct: 464 LIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPT 523

Query: 246 KYTFINALQGCS 257
             TF++ L  CS
Sbjct: 524 SSTFLSVLYACS 535



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 13/189 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +P+ ++ +LS    L +  LG  VH  I       ++++   LI MY KCG      
Sbjct: 419 VRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEAR 478

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC---- 155
            +FD M  +N+VSW +++S    +G+    LK+Y DM      P      SV+  C    
Sbjct: 479 CIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGG 538

Query: 156 -VSMGASEFGYSIHCFALKIRIEKNPFVGCS-VLNFYAKLGDVAAAERVFYSISSDDV-- 211
            V  G + F      + +   IE      C+ +++   + G +  A  +        V  
Sbjct: 539 LVKEGTTVFRSMTSDYGITPGIEH-----CTCMVDLLGRAGQLKEAFELISEFPKSAVGP 593

Query: 212 GCWNAMIGG 220
           G W A++G 
Sbjct: 594 GIWGALLGA 602


>gi|255541017|ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550688|gb|EEF52175.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 954

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 171/641 (26%), Positives = 313/641 (48%), Gaps = 7/641 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS    L++  LG QV+    K GF ++  ++  +I + ++ G FG  LRVF +++  N+
Sbjct: 158 LSACAALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENV 217

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W  I+S A+++GE+ + L ++  M     +PN F   S++  C S+   E G  I  +
Sbjct: 218 VCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLEEVELGKGIQGW 277

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K    K+ FVG +++N YAK GD+  A + F  +   +V  W A++ G+        A
Sbjct: 278 VIKC-CAKDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVSGFIKRDDSISA 336

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L     M       +K+T    +  C+         QIH  I+++       +  ALI+M
Sbjct: 337 LKFFKEMRKMKEETNKFTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINM 396

Query: 291 YIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           Y K   +  +  VF  M   K+   W  +   F++N++      L  K +  G RP+   
Sbjct: 397 YAKLHAISSSEMVFREMEGVKNPGIWTIMISSFAKNQDSQSAIDLLLKLLQQGLRPDKFC 456

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            S +L     L    LG ++ C  L  GF+ + +V SSL  M+ +CG++  ++ VF+ + 
Sbjct: 457 LSSVLSVIDSLY---LGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQIP 513

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            K+  +W  ++SG+  +       +    +     + +  TF  ++       + Q   +
Sbjct: 514 VKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHSLQKGKE 573

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           IHG   +        +  +L+  Y   G L+++ +  +     D  S  +++S     G 
Sbjct: 574 IHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFDLLAVKDQVSCSSLVSGYAQNGW 633

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             EA+ +FH ++ +    D + + ++L + A +        +H  ++KLG +++V V S+
Sbjct: 634 LEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDSDVSVGSS 693

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++  Y+KCG I+    AF+Q  +  D+I + T+I + A HG   EA++I+++M+   ++P
Sbjct: 694 LVTVYSKCGSIEDCWKAFNQ-IDDADLISWTTMIASCAQHGKGVEALKIYEQMRREGIRP 752

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP-DC 689
              TFV V+SACSH  LV++G   F SM   +G++P+  DC
Sbjct: 753 DSVTFVGVLSACSHANLVEEGYFHFNSMTKDFGLEPNNLDC 793



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/670 (24%), Positives = 311/670 (46%), Gaps = 9/670 (1%)

Query: 66  VHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           +H H++K   F ++  + N+L+  Y K G   + L+VFD +  +N++SW +I+S   +N 
Sbjct: 71  IHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISWNVIISGYNRNS 130

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F+   + +  M  +GF PN+   G V+  C ++     G  ++  A K     N  V  
Sbjct: 131 LFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVYSLATKNGFYSNGHVRA 190

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            +++  A+ G    A RVFY +S ++V CWN++I G    G  + AL++   M    +  
Sbjct: 191 GMIDLLARNGRFGDALRVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVP 250

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           + +TF + L  C+ + + ++G+ I G +I+   +  I +  A+++MY K   +  A K F
Sbjct: 251 NSFTFSSILTACASLEEVELGKGIQGWVIKCCAK-DIFVGTAIVNMYAKCGDIVDAVKEF 309

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            RM  ++V+SW  +  GF +  +       F +        N  T + ++  C K   + 
Sbjct: 310 SRMPVRNVVSWTAIVSGFIKRDDSISALKFFKEMRKMKEETNKFTVTTVISACAKPHFIK 369

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGY 423
             +Q+ C  L  G+  +  V ++LI M+ +  A+  +  VF  +   KN   W  ++S +
Sbjct: 370 EAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFREMEGVKNPGIWTIMISSF 429

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      +     + + G+  +      V+      ++  +  +IH  I+KTGF    
Sbjct: 430 AKNQDSQSAIDLLLKLLQQGLRPDKFCLSSVLSVI---DSLYLGREIHCYILKTGFVLDL 486

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + SSL   Y   G + +S++        D  SW +M+S     GH ++A  +   ++  
Sbjct: 487 SVGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTE 546

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
             KPD+     IL++ ++I + Q+ K IH +  +     E  V  A+++ Y+KCG ++ A
Sbjct: 547 RSKPDQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESA 606

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  FD      D +  ++L+  YA +G + EA+ +F +M ++N         SV+ A + 
Sbjct: 607 RKMFDL-LAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAG 665

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
              +D G  L   +  + G+         LV + S+ G +ED       +        + 
Sbjct: 666 LNRLDFGTQLHAHL-VKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQID-DADLISWT 723

Query: 724 SLLSGCRIHG 733
           ++++ C  HG
Sbjct: 724 TMIASCAQHG 733



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 182/362 (50%), Gaps = 17/362 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   L+  LS+ ++L    LG ++H +I+K GF  D+ + ++L  MYSKCG  G   +
Sbjct: 451 RPDKFCLSSVLSVIDSL---YLGREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYK 507

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+++  ++ +SWT ++S   ++G      ++   M T    P++    +++    S+ +
Sbjct: 508 VFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKPDQTTFSAILSAASSIHS 567

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIG 219
            + G  IH +A + R+     VG +++N Y+K G + +A ++F  ++  D V C ++++ 
Sbjct: 568 LQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMFDLLAVKDQVSC-SSLVS 626

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G+  EAL +   ML    T+D +   + L   + +   D G Q+H  +++  ++ 
Sbjct: 627 GYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLNRLDFGTQLHAHLVKLGLDS 686

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +S+ ++L+ +Y K   ++  +K F ++ D D+ISW T+    +++    +   ++ +  
Sbjct: 687 DVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIASCAQHGKGVEALKIYEQMR 746

Query: 340 LSGSRPNHVTFSILLRQCGKL------------LDLDLGLQLQCLALHCGFLDEENVTSS 387
             G RP+ VTF  +L  C               +  D GL+   L   C   +  N T  
Sbjct: 747 REGIRPDSVTFVGVLSACSHANLVEEGYFHFNSMTKDFGLEPNNLDCACRRSEAHNSTKE 806

Query: 388 LI 389
           ++
Sbjct: 807 IV 808



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 3/145 (2%)

Query: 566 QRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           + TK IH  +IK   FN+   VA++++D Y K G +  A   FD   N N VI +N +I 
Sbjct: 66  EETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKN-VISWNVIIS 124

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            Y  + L  ++   F  M  +   P+  T+  V+SAC+     + G  ++ S+ ++ G  
Sbjct: 125 GYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACAALETPNLGEQVY-SLATKNGFY 183

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHV 709
            +      ++D+L+RNG   DA  V
Sbjct: 184 SNGHVRAGMIDLLARNGRFGDALRV 208


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 270/495 (54%), Gaps = 3/495 (0%)

Query: 267 QIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           QIH LI+ + +  +  + +  LI  Y + + +  A  VFE+M  + + +WN++   +S  
Sbjct: 3   QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
             P +  +L+++ I  G +P+  TF++ L+ C  L+DLD+G  +   A+  G+  +  V 
Sbjct: 63  NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVV 122

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           SS++ ++ + G ++ A  VFD +  +++ +W  +++G+  +    D +  +  + +   E
Sbjct: 123 SSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTE 182

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF 505
            +G     +++ C    + +    +HG +++   +    + +SLI  Y   G+L+ +   
Sbjct: 183 GDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRV 242

Query: 506 SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
             G     + SWGA++S     G  ++ +     +  +G KPD   L + L++CA +G  
Sbjct: 243 FEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNL 302

Query: 566 QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
           +  KS+H  ++K  +  +V   +A+ID YAKCG +  AR  FDQ     D+I++N +I +
Sbjct: 303 KVGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFARALFDQ-IEPRDLILWNAMISS 360

Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
           Y  HG   EA+ +F KMK  N+ P  ATF S++SACSH GLV++G   F  +  +  +QP
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
           S   Y C+VD+LSR G +E+A  +IE M  +P   ++ +LLSGC  H N  +GE  ++K+
Sbjct: 421 SEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKI 480

Query: 746 LLLLPKNDAAHVLLS 760
           L   P +   +VL+S
Sbjct: 481 LESNPDDLGIYVLVS 495



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 195/399 (48%), Gaps = 2/399 (0%)

Query: 64  TQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           TQ+H  I+  G F ND      LIA Y +         VF++M +R++ +W  ++ A  +
Sbjct: 2   TQIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSR 61

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
               D  L +Y  M + G  P+       +K C S+   + G  I   A+      + FV
Sbjct: 62  TNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFV 121

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             SVLN YAK G +  A+ VF  +   DV  W  MI G+A  G   +A+++  +M  E  
Sbjct: 122 VSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERT 181

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D    +  +Q C+ + D   G  +HG ++R E+     +  +LIDMY K+  ++ A +
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASR 241

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFE +  K VISW  L  GF++N    +T +   +   SG +P+ V+    L  C ++ +
Sbjct: 242 VFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGN 301

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G  L    +   +LD+ + T +LI M+ +CGA+  A ++FD +  +++  WN ++S 
Sbjct: 302 LKVGKSLHGHIVKRLYLDKVSGT-ALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           Y  +    + L  F  + E+ +  +  TF  ++  C  S
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHS 399



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 182/367 (49%), Gaps = 4/367 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +    V  G+  D+F+ ++++ +Y+K G       VFD+M +R++VSWT +++   
Sbjct: 102 MGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFA 161

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G     + +Y  M+      +   +  +++ C S+G S+FG S+H   ++  +  +  
Sbjct: 162 QSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNV 221

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S+++ YAK G +  A RVF  I    V  W A+I G+A  G+  + L  +  M   G
Sbjct: 222 LQTSLIDMYAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSG 281

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  + I++L  C+ V +  +G+ +HG I++      +S   ALIDMY K   + +A 
Sbjct: 282 FKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFAR 340

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +F+++  +D+I WN +   +  + +  +  SLF K   +   P+H TF+ LL  C    
Sbjct: 341 ALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSG 400

Query: 362 DLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNEL 419
            ++ G      L         E   + ++ +  R G VE A+ + +++  K  +  W  L
Sbjct: 401 LVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVAL 460

Query: 420 LSGYCFN 426
           LSG C N
Sbjct: 461 LSG-CLN 466



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 89/186 (47%), Gaps = 3/186 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S  + D + L  SLS    + +  +G  +HGHIVK  + + +     LI MY+KCG   
Sbjct: 279 NSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALT 337

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +   +FD++  R+L+ W  ++S+   +G+    L +++ MK     P+     S++  C 
Sbjct: 338 FARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACS 397

Query: 157 SMGASEFG-YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCW 214
             G  E G Y  H    K +I+ +      +++  ++ G V  A ++  S+     +  W
Sbjct: 398 HSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIW 457

Query: 215 NAMIGG 220
            A++ G
Sbjct: 458 VALLSG 463


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/481 (29%), Positives = 256/481 (53%), Gaps = 9/481 (1%)

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR--PNHVTFS 351
           S G+ YA+ VF    + DV++WN++   F  +  P +    + + +L  SR  P+  TF 
Sbjct: 25  SLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTE-MLERSRNVPDRFTFP 83

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            LL+ C  LL+  +G  L    +      +  + ++L+ M+  CG ++ A  +F+ + ++
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           N   W  ++SGY  N C  + L  +  + E G   +  T   +V  C   ++  +  ++H
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I +     C  + S+L+  Y   G L  + +  +     D+ +W A++   V    + 
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRST 263

Query: 532 EAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA+ +F  +      +P+E  +  ++++CA +G  +  + +H ++ +      V + +++
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID ++KCGDI  A+  FD S +  D+I +N+++  +A HGL  EA+  F  M+  +LQP 
Sbjct: 324 IDMFSKCGDIDAAKRIFD-SMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPD 382

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + TF+ V++ACSH GLV +G  LF  +++ YG++   + YGC+VD+L R G L +A+  I
Sbjct: 383 EITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFI 442

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS----KRKRQR 766
            +MP QP   ++ S+L  CR++ N ELGE A+  LL L P ND  ++LLS    KRK   
Sbjct: 443 RVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWN 502

Query: 767 E 767
           E
Sbjct: 503 E 503



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 224/464 (48%), Gaps = 14/464 (3%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGL--RVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           +V  GF +     N LIA     G  G G    VF    E ++++W  ++ A + +    
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60

Query: 128 MGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
             L+ Y +M + +  +P+ F   S++K C  +   + G  +H   +K  +  + ++  ++
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           LN YA  GD+ +A  +F  +   +   W +MI GY       EAL +   M  +G + D+
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            T    +  C+ + D  +G ++H  I   +++    + +AL++MY K   +  A +VF++
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLD 364
           ++DKDV +W+ L  G+ +N    +   LF + +  GS  RPN VT   ++  C +L DL+
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFRE-VAGGSNMRPNEVTILAVISACAQLGDLE 299

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +             ++ +SLI MF +CG ++ A  +FD++SYK++ +WN +++G+ 
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFA 359

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAIIKTGFS 480
            +    + L  F  +  + ++ +  TF  V+  C  +    E +++  +I  A+      
Sbjct: 360 LHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIE-ALYGVRLK 418

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           S  Y C  ++      G L  + EF      + D A WG+M+ A
Sbjct: 419 SEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/522 (23%), Positives = 233/522 (44%), Gaps = 17/522 (3%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQ 254
           V  A  VF      DV  WN+M+  + +      AL   + ML     + D++TF + L+
Sbjct: 28  VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           GC+L+ +F +G+ +HG +++  +   + I   L++MY     +  A  +FERM  ++ + 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W ++  G+ +N  P +   L+ K    G  P+ VT + L+  C +L DL +G++L     
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS--- 204

Query: 375 HCGFLDEE---NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           H   +D +    + S+L+ M+ +CG ++ A  VFD +S K++  W+ L+ GY  N    +
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 432 VLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
            L+ F  +   S +  N  T   V+  C +  + +    +H  I +T       + +SLI
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             +   G +D +    +     D+ SW +M++     G   EA+  F  +     +PDE 
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEI 384

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
               +L +C+  G  Q  K +   +  L G   +      ++D   + G +  AR     
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444

Query: 610 SFNSNDVIVYNTLIMA---YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
                D  ++ +++ A   Y +  L  EA        L  L+P+      ++S    K  
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARF-----LLKLEPTNDGVYILLSNIYAKRK 499

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           +       + + ++ G+Q +P C   ++D ++ +    D  H
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSH 541



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 178/344 (51%), Gaps = 4/344 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +HG +VK    +D++++  L+ MY+ CG       +F+ M  RN V WT ++S  +
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N   +  L +Y  M+ +GF P+E  + +++  C  +     G  +H    ++ ++    
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FE 240
           +G +++N YAK GD+  A +VF  +S  DV  W+A+I GY       EAL +   +    
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  ++ T +  +  C+ + D + GR +H  I R++   S+S+ N+LIDM+ K   +D A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F+ M+ KD+ISWN++  GF+ +    +  + F     +  +P+ +TF  +L  C   
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396

Query: 361 LDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             +  G +L  +  AL+   L  E+    ++ + CR G +  A 
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHY-GCMVDLLCRAGLLAEAR 439



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 127/242 (52%), Gaps = 8/242 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +A  +S    LK   +G ++H HI ++       L + L+ MY+KCG      +VF
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGAS 161
           D+++++++ +W+ ++   ++N      L+++ ++     M PNE  + +V+  C  +G  
Sbjct: 239 DKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDL 298

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  +H +  + +   +  +  S+++ ++K GD+ AA+R+F S+S  D+  WN+M+ G+
Sbjct: 299 ETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGF 358

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-------IHGLIIR 274
           A  G G EAL     M    +  D+ TFI  L  CS       G++       ++G+ ++
Sbjct: 359 ALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK 418

Query: 275 SE 276
           SE
Sbjct: 419 SE 420



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 129/336 (38%), Gaps = 61/336 (18%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R + + +   +S    L     G  VH +I +    + + L N+LI M+SKCG    
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             R+FD M+ ++L+SW  +V+    +G     L  +  M+T    P+E     V+  C  
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSH 395

Query: 158 MGASEFG----YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVG 212
            G  + G    Y I      +R+ K+   GC V +   + G +A A      +    D  
Sbjct: 396 AGLVQEGKKLFYEIEAL-YGVRL-KSEHYGCMV-DLLCRAGLLAEAREFIRVMPLQPDGA 452

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            W +M+G                                    C +  + ++G +    +
Sbjct: 453 IWGSMLG-----------------------------------ACRVYNNLELGEEAARFL 477

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           ++ E   +  +   L ++Y K    +   KV E M +K +             K PG ++
Sbjct: 478 LKLE-PTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGI------------QKTPGCSS 524

Query: 333 ----SLFHKFILSG-SRPNHVTFSILLRQCGKLLDL 363
               ++ H F+    S P     SI+LRQ  + L L
Sbjct: 525 VVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKL 560


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 260/499 (52%), Gaps = 11/499 (2%)

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + +AL  +Y   S +D+A KVF+ +   D + WNTL  G S +    +    F + +  G
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMVCDG 206

Query: 343 S-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           S RP+  T + +L    ++ D+ +G  +   A  CG  + E+V + LI ++ +CG VE A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +FD +   ++  +N L+SGY  N      +  F  +   G+  N  T   ++      
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            +  +   +HG ++K+GF++   + +++   +     ++++ +  +      M SW AM+
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           S     G    AV +F  +V+   +P+   + + L++CA +GA    K +H  + +    
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             VYV +A+ID YAKCG I  AR  F+   N N V+ +N +I  Y  HG  +EA++++  
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKN-VVSWNAMIAGYGLHGQGAEALKLYKD 505

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M  A+L P+ ATF+SV+ ACSH GLV++G  +F+SM   Y + P  +   C+VD+L R G
Sbjct: 506 MLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAG 565

Query: 702 YLEDAKHVIEIMPFQP-SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            L++A  +I   P     P V+ +LL  C +H + +L + AS+KL  L P+N   +VLLS
Sbjct: 566 QLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLS 625

Query: 761 ----KRKRQREGNLLDHEG 775
                +K+  E  ++  E 
Sbjct: 626 NLHTSKKQYSEAAVVRQEA 644



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/466 (22%), Positives = 210/466 (45%), Gaps = 29/466 (6%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
            D F+ + L  +Y          +VFD +   + V W  +++    +   +   +M  D 
Sbjct: 147 ADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVESFARMVCD- 205

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
                 P+   + SV+     +     G  +H FA K  + ++  V   +++ Y+K GDV
Sbjct: 206 --GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            +A  +F  +   D+  +NA+I GY+  G    ++N+ + ++  G+  +  T +  +   
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           S      + + +HG +++S    +  +  A+  ++ + + M+ A K F+ M +K + SWN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
            +  G+++N       +LF + +    RPN +T S  L  C +L  L LG  L  +    
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
                  V ++LI M+ +CG++  A  +F+ +  KN+ +WN +++GY  +   A+ LK +
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI----------- 485
            ++ ++ +     TF  V+  C            HG +++ G+     +           
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACS-----------HGGLVEEGWKVFRSMTDDYAINPGIE 552

Query: 486 -CSSLIKSYVNFGQLDNSFEFSNGAERLDMAS--WGAMMSA-LVHQ 527
            C+ ++      GQL  +FE  +   +  +    WGA++ A +VH+
Sbjct: 553 HCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHK 598



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 148/321 (46%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           D  +R D   LA  L  +  +    +G  VH    K G      +   LI++YSKCG   
Sbjct: 205 DGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVE 264

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +FD M + +LV++  ++S    NG     + ++ ++ T G  PN   + +++ V  
Sbjct: 265 SARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHS 324

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G       +H F LK     N  V  ++   + +L D+ +A + F ++    +  WNA
Sbjct: 325 PFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNA 384

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           MI GYA  G    A+ +   M+   +  +  T  + L  C+ +    +G+ +H +I   +
Sbjct: 385 MISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEED 444

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           +E ++ ++ ALIDMY K   +  A ++F  M +K+V+SWN +  G+  +    +   L+ 
Sbjct: 445 LEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYK 504

Query: 337 KFILSGSRPNHVTFSILLRQC 357
             + +   P   TF  +L  C
Sbjct: 505 DMLDAHLLPTSATFLSVLYAC 525



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 180/425 (42%), Gaps = 6/425 (1%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FV  ++   Y  L  V  A +VF ++ S D   WN ++ G +    G EA+   + M+ +
Sbjct: 150 FVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS----GSEAVESFARMVCD 205

Query: 241 G-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           G +  D  T  + L   + VAD  +GR +H    +  +     ++  LI +Y K   ++ 
Sbjct: 206 GSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVES 265

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  +F+ M   D++++N L  G+S N   G + +LF + +  G  PN  T   L+     
Sbjct: 266 ARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSP 325

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                L   L    L  GF     V++++  + CR   +E A   FD +  K + +WN +
Sbjct: 326 FGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAM 385

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +SGY  N      +  F  + +  V  N  T    +  C +     +   +H  I +   
Sbjct: 386 ISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDL 445

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               Y+ ++LI  Y   G +  +    N  +  ++ SW AM++     G   EA+ ++  
Sbjct: 446 EPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKD 505

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
           +++A   P      ++L +C+  G  +   K           N  +   + ++D   + G
Sbjct: 506 MLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAG 565

Query: 599 DIKGA 603
            +K A
Sbjct: 566 QLKEA 570



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 3/264 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +L   +HG ++K GFT +  +   +  ++ +        + FD M E+ + SW  ++S  
Sbjct: 330 LLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGY 389

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG  +M + ++  M      PN   + S +  C  +GA   G  +H    +  +E N 
Sbjct: 390 AQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNV 449

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  ++++ YAK G ++ A R+F ++ + +V  WNAMI GY   G G EAL +   ML  
Sbjct: 450 YVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDA 509

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            +     TF++ L  CS     + G ++   +     +   I     ++D+  ++  +  
Sbjct: 510 HLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKE 569

Query: 300 AFKVFERMADKDVIS--WNTLFGG 321
           AF++        V    W  L G 
Sbjct: 570 AFELISEFPKSAVGPGVWGALLGA 593



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 13/189 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +PI ++ +LS    L +  LG  +H  I +     ++++   LI MY+KCG      
Sbjct: 410 VRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEAR 469

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F+ M  +N+VSW  +++    +G+    LK+Y DM     +P      SV+  C   G
Sbjct: 470 RIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGG 529

Query: 160 ASEFGYSI-----HCFALKIRIEKNPFVGCS-VLNFYAKLGDVAAAERVFYSISSDDV-- 211
             E G+ +       +A+   IE      C+ +++   + G +  A  +        V  
Sbjct: 530 LVEEGWKVFRSMTDDYAINPGIEH-----CTCMVDLLGRAGQLKEAFELISEFPKSAVGP 584

Query: 212 GCWNAMIGG 220
           G W A++G 
Sbjct: 585 GVWGALLGA 593


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 185/647 (28%), Positives = 314/647 (48%), Gaps = 56/647 (8%)

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           SE    +H  ++K     N F+  +++N Y ++GD+ +A+++F  +S+ ++  W  +I G
Sbjct: 115 SEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISG 174

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEVE 278
           Y   G   EA      M+  G   + Y F +AL+ C  S  +   +G QIHGLI ++   
Sbjct: 175 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 234

Query: 279 CSISIVNALIDMYIKSSGMDYA---FKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
             + + N LI MY   S +D A     VF+ +  ++ ISWN++   +S   +      LF
Sbjct: 235 SDVVVCNVLISMY--GSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLF 292

Query: 336 HKFILSGS----RPNHV--TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSL 388
                 G     +PN     FS+L     K      G ++    +  G  D +  + + L
Sbjct: 293 SSMQKEGLGFSFKPNDAFSEFSVLEEGRRK------GREVHAHVIRTGLNDNKVAIGNGL 346

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV---------------- 432
           + M+ + GA+  A SVF+ +  K+  +WN L+SG   N C  D                 
Sbjct: 347 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWN 406

Query: 433 ----------------LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
                           +K F  +   G  ++  TF  ++         ++  QIH  ++K
Sbjct: 407 SVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLK 466

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
              S    I ++L+  Y   G+++   + F+  +E  D  SW +M+S  +H    H+A+ 
Sbjct: 467 YCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMD 526

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +   +++ G++ D +   TIL++CA++   +R   +H   I+    ++V V SA++D Y+
Sbjct: 527 LVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYS 586

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG I  A   F+      +V  +N++I  YA HG   +A+++F +M L    P   TFV
Sbjct: 587 KCGRIDYASRFFEL-MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFV 645

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+SACSH G V++G   FKSM   Y + P  + + C+VD+L R G L++    I  MP 
Sbjct: 646 GVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPM 705

Query: 716 QPSPTVYRSLLSG-CRIHG-NKELGEWASEKLLLLLPKNDAAHVLLS 760
           +P+  ++R++L   CR +G N ELG  A+E LL L P+N   +VLL+
Sbjct: 706 KPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLA 752



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 150/587 (25%), Positives = 266/587 (45%), Gaps = 53/587 (9%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H   +K GF  ++FL N LI +Y + G  G   ++FDEM+ RNLV+W  ++S   QNG
Sbjct: 120 ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 179

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS--EFGYSIHCFALKIRIEKNPFV 182
           + D     + DM   GF+PN +A GS ++ C   G S  + G  IH    K R   +  V
Sbjct: 180 KPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVV 239

Query: 183 GCSVLNFYAKLGDVA-AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              +++ Y    D A  A  VF  I   +   WN++I  Y+  G    A ++ SSM  EG
Sbjct: 240 CNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEG 299

Query: 242 ITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEV-ECSISIVNALIDMYIKSSGMDY 299
           +    +   +A    S++ +    GR++H  +IR+ + +  ++I N L++MY KS  +  
Sbjct: 300 LGFS-FKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 358

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH----------------------- 336
           A  VFE M +KD +SWN+L  G  +N+     A +F                        
Sbjct: 359 ACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEAS 418

Query: 337 -----KFILSGSRP----NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
                K+ L   R     + VTF  +L     L   ++  Q+  L L     D+  + ++
Sbjct: 419 VSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNA 478

Query: 388 LIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           L+  + +CG +     +F  +S  ++  +WN ++SGY  N      +     + + G  +
Sbjct: 479 LLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRL 538

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +  TF  ++  C      +   ++H   I+    S   + S+L+  Y   G++D +  F 
Sbjct: 539 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 598

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--- 563
                 ++ SW +M+S     GH  +A+ +F  ++  G+ PD      +L++C+ +G   
Sbjct: 599 ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVE 658

Query: 564 -AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             ++  KS+          +EVY  S  ++ ++   D+ G     D+
Sbjct: 659 EGFEHFKSM----------SEVYRLSPRVEHFSCMVDLLGRAGKLDE 695



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 194/410 (47%), Gaps = 40/410 (9%)

Query: 58  KSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           + R  G +VH H+++ G   N + + N L+ MY+K G       VF+ M E++ VSW  +
Sbjct: 318 EGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSL 377

Query: 117 VSAAIQN-------------GEFDM-------------------GLKMYVDMKTNGFMPN 144
           +S   QN              E+D                     +K ++ M   G+  +
Sbjct: 378 ISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLS 437

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
                +++    S+   E  + IH   LK  +  +  +G ++L+ Y K G++   E++F 
Sbjct: 438 RVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFA 497

Query: 205 SIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            +S + D   WN+MI GY H     +A+++V  M+ +G  +D +TF   L  C+ VA  +
Sbjct: 498 RMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLE 557

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G ++H   IR+ +E  + + +AL+DMY K   +DYA + FE M  ++V SWN++  G++
Sbjct: 558 RGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYA 617

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEE 382
            + +  +   LF + +L G  P+HVTF  +L  C  +  ++ G +  + ++         
Sbjct: 618 RHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRV 677

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDAD 431
              S ++ +  R G ++      +++  K N+  W  +L      CC A+
Sbjct: 678 EHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA----CCRAN 723



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 197/437 (45%), Gaps = 45/437 (10%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR-VFDEMAERNLVSWTLIVSAA 120
           LG Q+HG I K  + +D+ + N LI+MY  C       R VFD +  RN +SW  I+S  
Sbjct: 220 LGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 279

Query: 121 IQNGEFDMGLKMYVDMKTNG----FMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
            + G+      ++  M+  G    F PN+ F+  SV++          G  +H   ++  
Sbjct: 280 SRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLE-----EGRRKGREVHAHVIRTG 334

Query: 176 IEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG-------------- 220
           +  N   +G  ++N YAK G +A A  VF  +   D   WN++I G              
Sbjct: 335 LNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMF 394

Query: 221 -----YAHCGYG-------------FEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
                Y    +               +A+     M+  G  + + TFIN L   S ++  
Sbjct: 395 SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLH 454

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGG 321
           ++  QIH L+++  +    +I NAL+  Y K   M+   K+F RM++ +D +SWN++  G
Sbjct: 455 EVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 514

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +  N+   +   L    +  G R +  TF+ +L  C  +  L+ G+++    +      +
Sbjct: 515 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESD 574

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V S+L+ M+ +CG ++ A   F+ +  +N+ +WN ++SGY  +      LK F  +  
Sbjct: 575 VVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMML 634

Query: 442 SGVEVNGCTFFYVVETC 458
            G   +  TF  V+  C
Sbjct: 635 DGQPPDHVTFVGVLSAC 651



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 3/274 (1%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-RN 109
           LS   +L    +  Q+H  ++K   ++D  + N L++ Y KCG      ++F  M+E R+
Sbjct: 445 LSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRD 504

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
            VSW  ++S  I N      + +   M   G   + F   +++  C S+   E G  +H 
Sbjct: 505 EVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHA 564

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             ++  +E +  VG ++++ Y+K G +  A R F  +   +V  WN+MI GYA  G+G +
Sbjct: 565 CGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEK 624

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALI 288
           AL + + M+ +G   D  TF+  L  CS V   + G      +     +   +   + ++
Sbjct: 625 ALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMV 684

Query: 289 DMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG 321
           D+  ++  +D        M  K +V+ W T+ G 
Sbjct: 685 DLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGA 718



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 61/125 (48%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    A  LS   ++ +   G +VH   ++    +D+ + + L+ MYSKCG   +  R
Sbjct: 537 RLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASR 596

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F+ M  RN+ SW  ++S   ++G  +  LK++  M  +G  P+      V+  C  +G 
Sbjct: 597 FFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGF 656

Query: 161 SEFGY 165
            E G+
Sbjct: 657 VEEGF 661


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 147/494 (29%), Positives = 260/494 (52%), Gaps = 2/494 (0%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QIH  ++ S +  S  +V   ++       + YA KVF+   +  V  WN +  G+S + 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
             G    ++ +   SG  P+  T   +L+ C  +  L++G ++       GF  +  V +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            L+ ++ +CG VE A  VF+ +  +NI +W  ++SGY  N    + L+ F  + +  V+ 
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +      V+      E+ +    IHG ++K G      +  SL   Y   GQ+  +  F 
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  E  ++  W AM+S     G+ +EAV +F  ++    + D   + + + +CA +G+  
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K +  ++ K  +  +V+V +A+ID +AKCG +  AR  FD++ +  DV+V++ +I+ Y
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD-KDVVVWSAMIVGY 447

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             HG   +A+++F  MK A + P+  TFV +++AC+H GLV++G  LF SM   YG++  
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEAR 506

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
              Y C+VD+L R+G+L +A   I  MP +P  +V+ +LL  C+I+ +  LGE+A+E+L 
Sbjct: 507 HQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLF 566

Query: 747 LLLPKNDAAHVLLS 760
            L P N   +V LS
Sbjct: 567 SLDPFNTGHYVQLS 580



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 2/364 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G +VHG I +LGF +D+F+QN L+A+Y+KCG       VF+ + +RN+VSWT ++S   
Sbjct: 187 VGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYG 246

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG     L+++  M+     P+  A+ SV++    +   E G SIH   +K+ +E  P 
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S+   YAK G V  A   F  +   +V  WNAMI GYA  GY  EA+ +   M+ + 
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  T  +A+  C+ V   D+ + +   I ++E    + +  ALIDM+ K   +D A 
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAR 426

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VF+R  DKDV+ W+ +  G+  +        LF+    +G  PN VTF  LL  C    
Sbjct: 427 EVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSG 486

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELL 420
            ++ G +L     + G        + ++ +  R G +  A+     +  +  ++ W  LL
Sbjct: 487 LVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546

Query: 421 SGYC 424
            G C
Sbjct: 547 -GAC 549



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 210/460 (45%), Gaps = 1/460 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  +V  G     FL    +      G  G+  +VFDE  E ++  W  I+     + 
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F   ++MY  M+ +G  P+ F +  V+K C  +   E G  +H    ++  E + FV  
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            ++  YAK G V  A  VF  +   ++  W +MI GY   G   EAL +   M    +  
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D    ++ L+  + V D + G+ IHG +++  +E    ++ +L  MY K   +  A   F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           ++M   +V+ WN +  G+++N    +   LF + I    R + +T    +  C ++  LD
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           L   +        + ++  V ++LI MF +CG+V++A  VFD    K++  W+ ++ GY 
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    D +  F  + ++GV  N  TF  ++  C  S   +   ++  ++   G  +   
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQ 508

Query: 485 ICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
             + ++      G L+ +++F +       ++ WGA++ A
Sbjct: 509 HYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 193/423 (45%)

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+    +N    +G++  A +VF       V  WNA+I GY+   +  +A+ + S M   
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D +T    L+ CS V   ++G+++HG I R   E  + + N L+ +Y K   ++ A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             VFE + D++++SW ++  G+ +N  P +   +F +      +P+ +    +LR    +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            DL+ G  +    +  G   E ++  SL  M+ +CG V +A S FD +   N+  WN ++
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMI 343

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SGY  N    + +  F  +    +  +  T    +  C +  +  +   +   I KT + 
Sbjct: 344 SGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYR 403

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +  ++ ++LI  +   G +D + E  +     D+  W AM+      G   +A+ +F+++
Sbjct: 404 NDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAM 463

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            +AG  P++     +L +C   G  +    +   +   G        + V+D   + G +
Sbjct: 464 KQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHL 523

Query: 601 KGA 603
             A
Sbjct: 524 NEA 526



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 140/278 (50%), Gaps = 13/278 (4%)

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
           S +++ + QIH  ++ +G    G++ +  + +  N G++  + +  +      +  W A+
Sbjct: 81  SVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAI 140

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +          +A+ ++  +  +G  PD + L  +L +C+ +   +  K +H  + +LGF
Sbjct: 141 IRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGF 200

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            ++V+V + ++  YAKCG ++ AR+ F +  +  +++ + ++I  Y  +GL  EA+ IF 
Sbjct: 201 ESDVFVQNGLVALYAKCGRVEQARIVF-EGLDDRNIVSWTSMISGYGQNGLPMEALRIFG 259

Query: 641 KMKLANLQPSQATFVSVMSACS-----HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
           +M+  N++P     VSV+ A +      +G    GC++      + G++  PD    L  
Sbjct: 260 QMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV------KMGLEFEPDLLISLTA 313

Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           M ++ G +  A+   + M   P+  ++ +++SG   +G
Sbjct: 314 MYAKCGQVMVARSFFDQMEI-PNVMMWNAMISGYAKNG 350



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 1/283 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I L   L    +++    G  +HG +VK+G   +  L  +L AMY+KCG      
Sbjct: 266 VKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVAR 325

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             FD+M   N++ W  ++S   +NG  +  + ++ +M +     +   V S +  C  +G
Sbjct: 326 SFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + +    +  +  K     + FV  ++++ +AK G V  A  VF      DV  W+AMI 
Sbjct: 386 SLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIV 445

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G G +A+++  +M   G+  +  TF+  L  C+     + G ++   +    +E 
Sbjct: 446 GYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEA 505

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGG 321
                  ++D+  +S  ++ A+     M  +  +S W  L G 
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548


>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 276/543 (50%), Gaps = 9/543 (1%)

Query: 232 NVVSSMLFEGI-TMDKYTFI-----NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           N V  + FE + T+D ++F        LQ C+   D   G  +H  +++  +   I I N
Sbjct: 39  NPVEGIPFEKLETIDDHSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWN 98

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG-FSENKNPGQTASLFHKFILSGSR 344
            L+ +Y+K   + +A ++F+ M  +DV+S+NT+       N +      L+ K      +
Sbjct: 99  KLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVK 158

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PNH+TF+ L+  C  L+ L L        + CG    E V SSL+  + +   +E A   
Sbjct: 159 PNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKA 218

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+ +   ++ +WN ++ G   N      ++ F  + +  V V+G T   +++TC +  + 
Sbjct: 219 FNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDL 278

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSA 523
           +   Q HG+ IK G +    I ++LI  Y    + + +  +        ++ SW AM+S 
Sbjct: 279 KHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISG 338

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            +    N EA+ +F  ++  G + +++   +IL     +   ++ K IH  +IK  F  +
Sbjct: 339 FMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLD 398

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           + V +A+ID Y+KCG ++ A + F      +DV+   T+IM+Y  HG   EA+EI  +MK
Sbjct: 399 LSVNNALIDMYSKCGSLEDAHLVF-MKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMK 457

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
              L P   TF+  + ACSH GLV++G  +FK M   + ++P  + + C+VDML R G L
Sbjct: 458 SEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRL 517

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRK 763
            +A++ I+ M  +    V+ +LL  CR+HG   LGE +++K++ L P     +VLL+   
Sbjct: 518 NEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIY 577

Query: 764 RQR 766
            +R
Sbjct: 578 AER 580



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 198/418 (47%), Gaps = 13/418 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH ++VKL     I + N L+++Y K G+     ++FD M  R++VS+  ++SA+++
Sbjct: 78  GMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVR 137

Query: 123 NGEFDMGL-KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           N    + L  +Y  MK     PN      ++  C  + A       H   ++  +  N F
Sbjct: 138 NNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEF 197

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG S+++ YAK   +  A + F  I   D+  WN MI G A       A+ + S ML   
Sbjct: 198 VGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGN 257

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK-SSGMDYA 300
           + +D +T  + ++ CS   D   G Q HG  I+  +     I NALI MY K   G+   
Sbjct: 258 VRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASP 317

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F  +++ ++ISW  +  GF +N+   +   LF + +  G R N  +FS +L   G L
Sbjct: 318 VKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNL 377

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +L+ G Q+    +   F  + +V ++LI M+ +CG++E AH VF  +   ++ +   ++
Sbjct: 378 ANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMI 437

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
             Y  +    + L+    +   G+  +G TF   +  C            HG +++ G
Sbjct: 438 MSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACS-----------HGGLVEEG 484



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 136/600 (22%), Positives = 264/600 (44%), Gaps = 29/600 (4%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W L   +++ N    +  +    +  + F  ++F+   +++ C   G    G S+H + +
Sbjct: 29  WCLRTISSLANPVEGIPFEKLETIDDHSFKFHQFS--QILQECTDAGDLRTGMSVHTYLV 86

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           K+ I     +   +L+ Y K G +  A ++F ++   DV  +N MI       Y  +AL+
Sbjct: 87  KLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNY--DALD 144

Query: 233 VV---SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS----IVN 285
           +V   S M  E +  +  TF   +  C    D  I  ++ G+     V C +S    + +
Sbjct: 145 LVGLYSKMKKEDVKPNHITFAGLIGAC----DGLIALRLRGIFHAHTVRCGLSSNEFVGS 200

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +L+D Y K   ++ A K F  + + D++SWN +  G + N +      +F + +    R 
Sbjct: 201 SLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRV 260

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC-GAVEMAHSV 404
           +  T + +++ C K  DL  G+Q    A+  G   E  + ++LI M+ +C   V     +
Sbjct: 261 DGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKI 320

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F ++S  NI +W  ++SG+  N  + + +  F  +   GV  N  +F  ++       N 
Sbjct: 321 FGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANL 380

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +   QIH  IIK+ F     + ++LI  Y   G L+++        + D+ S   M+ + 
Sbjct: 381 EQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSY 440

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFN 581
              G   EA+ I   +   G  PD       L +C+  G  +    +   +I+   L   
Sbjct: 441 GQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPK 500

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
            E +  + V+D   + G +  A    D+    +DV+V+ TL+ A   HG     M + +K
Sbjct: 501 REHF--ACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHG----EMVLGEK 554

Query: 642 --MKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
              K+  LQP +   +V + +  + +G  +   ++ + + S +G++    C    ++ +S
Sbjct: 555 SAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLVS-HGLKKQVGCSWVALETMS 613



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 175/361 (48%), Gaps = 4/361 (1%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H H V+ G +++ F+ ++L+  Y+K       ++ F+E+ E +LVSW +++    +N   
Sbjct: 184 HAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNNSK 243

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
           +  ++M+  M       + F + S++K C   G  + G   H  A+K+ +     +  ++
Sbjct: 244 EHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNAL 303

Query: 187 LNFYAKLGD-VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +  Y+K    VA+  ++F SIS  ++  W AMI G+       EA+ +   ML  G+  +
Sbjct: 304 ITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVREN 363

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
            ++F + L     +A+ + G+QIH  II+S     +S+ NALIDMY K   ++ A  VF 
Sbjct: 364 DFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFM 423

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           +M   DV+S  T+   + ++    +   +  +    G  P+ VTF   L  C     ++ 
Sbjct: 424 KMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEE 483

Query: 366 GLQLQCLALHCGFLDEENVT-SSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGY 423
           G+++  + +    L  +    + ++ M  R G +  A +  D +  + ++  W  LL G 
Sbjct: 484 GVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVWETLL-GA 542

Query: 424 C 424
           C
Sbjct: 543 C 543



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 11/306 (3%)

Query: 19  HATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           HA R     L GN +   D F     I   K+ S   +LK    G Q HG  +KLG  ++
Sbjct: 245 HAVRMFSQMLKGNVRV--DGFTLTSII---KTCSKPGDLKH---GMQFHGSAIKLGLAHE 296

Query: 79  IFLQNNLIAMYSKCGY-FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
             + N LI MYSKC       +++F  ++E N++SWT ++S  +QN + +  + ++ +M 
Sbjct: 297 TPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEML 356

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G   N+F+  S++ V  ++   E G  IH   +K     +  V  ++++ Y+K G + 
Sbjct: 357 RLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLE 416

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  VF  +   DV     MI  Y   G G EAL +++ M  EG+  D  TF+  L  CS
Sbjct: 417 DAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACS 476

Query: 258 LVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISW 315
                + G ++  ++I    ++        ++DM  ++  ++ A    + M  + DV+ W
Sbjct: 477 HGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVLVW 536

Query: 316 NTLFGG 321
            TL G 
Sbjct: 537 ETLLGA 542


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 302/585 (51%), Gaps = 10/585 (1%)

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N F+G  ++  Y K G VA+A   F +I+  +   W +M+  YA  G+   AL++   M 
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM- 115

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGM 297
              +  +   +   L  C+ +   + G+ IH  I  ++ ++  + + N+L+ MY K   +
Sbjct: 116 --DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSL 173

Query: 298 DYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           + A ++FERM+  + V SWN +   ++++ +  +   L+    +    P+  TF+ +L  
Sbjct: 174 EDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSA 230

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  LD G ++  L    G   + ++ ++L+ M+ RC  ++ A  +F  +  +++ +W
Sbjct: 231 CSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSW 290

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           + +++ +       + ++ +  +   GV  N  TF  V+  C    + +    +H  I+ 
Sbjct: 291 SAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILG 350

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G+       ++L+  Y ++G LD +    +  E  D   W  ++     QGH    + +
Sbjct: 351 NGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLEL 410

Query: 537 FHSLVEAGEKPDEYILGT-ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +  +    + P   I+ + ++++CA++GA+   +  H  +   G  ++  +A+++++ Y+
Sbjct: 411 YREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYS 470

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           + G+++ AR  FD+  +S D + + TLI  YA HG    A+ ++ +M+L   +PS+ TF+
Sbjct: 471 RWGNLESARQVFDK-MSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFM 529

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+ ACSH GL ++G  LF S+ S Y M P+   Y C++D+LSR G L DA+ +I  MP 
Sbjct: 530 VVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPV 589

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +P+   + SLL   RIH + +    A+ ++  L P + A++VLLS
Sbjct: 590 EPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLS 634



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 156/605 (25%), Positives = 274/605 (45%), Gaps = 16/605 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H  I      N +FL N ++  Y KCG        FD +A +N  SW  +++A  QNG
Sbjct: 45  QIHDRISGAASAN-VFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNG 103

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPFVG 183
            +   L +Y  M      PN     +V+  C S+ A E G +IH      + ++ +  + 
Sbjct: 104 HYRAALDLYKRMD---LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILE 160

Query: 184 CSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
            S+L  YAK G +  A+R+F  +S    V  WNAMI  YA  G+  EA+ +   M  E  
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPS 220

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
                TF + L  CS +   D GR+IH LI     E  +S+ NAL+ MY +   +D A K
Sbjct: 221 VR---TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAK 277

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+R+  +DV+SW+ +   F+E     +    + K  L G RPN+ TF+ +L  C  + D
Sbjct: 278 IFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGD 337

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +    L  G+       ++L+ ++   G+++ A S+FD +  ++   W  L+ G
Sbjct: 338 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGG 397

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFY--VVETCCRSENQQMVGQIHGAIIKTGFS 480
           Y        VL+ +  + ++  +V      Y  V+  C          Q H  I   G  
Sbjct: 398 YSKQGHRTGVLELYREM-KNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMI 456

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + +SL+  Y  +G L+++ +  +     D  +W  +++     G +  A+ ++  +
Sbjct: 457 SDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEM 516

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCG 598
              G +P E     +L +C+  G  ++ K +    I+  +     +A  S +ID  ++ G
Sbjct: 517 ELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-ISIQSDYAMHPNIAHYSCIIDLLSRAG 575

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSV 657
            +  A    +      + + +++L+ A   H  V  A     ++ KL  + P+    +S 
Sbjct: 576 RLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSN 635

Query: 658 MSACS 662
           + A +
Sbjct: 636 VHAVT 640



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 203/434 (46%), Gaps = 6/434 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWG 98
           L+ +P+     L    ++++   G  +H  I    G   D+ L+N+L+ MY+KCG     
Sbjct: 117 LQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDA 176

Query: 99  LRVFDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            R+F+ M+  R++ SW  +++A  Q+G F+  +++Y DM      P+     SV+  C +
Sbjct: 177 KRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVLSACSN 233

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           +G  + G  IH        E +  +  ++L  YA+   +  A ++F  +   DV  W+AM
Sbjct: 234 LGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAM 293

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  +A      EA+   S M  EG+  + YTF + L  C+ V D   GR +H  I+ +  
Sbjct: 294 IAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGY 353

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++    AL+D+Y     +D A  +F+++ ++D   W  L GG+S+  +      L+ +
Sbjct: 354 KITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYRE 413

Query: 338 FILSGSRP-NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
              +   P   + +S ++  C  L       Q        G + +  + +SL+ M+ R G
Sbjct: 414 MKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWG 473

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            +E A  VFD +S ++   W  L++GY  +      L  +  +   G E +  TF  V+ 
Sbjct: 474 NLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLY 533

Query: 457 TCCRSENQQMVGQI 470
            C  +  Q+   Q+
Sbjct: 534 ACSHAGLQEQGKQL 547


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 148/476 (31%), Positives = 253/476 (53%), Gaps = 1/476 (0%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +A++  Y K S +  A KVF+ M ++D + WNT+  G  +N    +   +F   +  G  
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
            +  T + +L    +L DL LG+ +QCLA+  GF     V + L  ++ +CG +E A  +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +   ++ ++N ++SGY  N      ++ F  +  SG +VN  +   ++       + 
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
            +   IHG   K+G  S   + ++L   Y    +++++    + +    +ASW AM+S  
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G   +A+++F  + +   +P+   + +IL++CA +GA    K +H  + +  F + +
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNI 444

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           +V++A+ID YAKCG I  A+  F      N V  +N +I  Y  HG   EA+ +F++M  
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNAV-TWNAMISGYGLHGYGHEALNLFNEMLH 503

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           + + P+  TF+SV+ ACSH GLV +G  +F+SM   +G +P P+ Y C+VD+L R G L+
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            A   I  MP +P P V+ +LL  C IH +  L   AS+KL  L P+N   +VLLS
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLS 619



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 211/460 (45%), Gaps = 3/460 (0%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF +D+F+ + ++A Y K        +VFD M ER+ V W  +VS  ++N  FD  + ++
Sbjct: 136 GFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIF 195

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
            DM   G   +   V +V+     +     G  I C A+K+    + +V   +   Y+K 
Sbjct: 196 GDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKC 255

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G++  A  +F  I   D+  +NAMI GY        ++ +   +L  G  ++  + +  +
Sbjct: 256 GEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLI 315

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
                     + R IHG   +S V  + S+  AL  +Y + + ++ A  +F+  ++K + 
Sbjct: 316 PVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLA 375

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SWN +  G+++N    +  SLF +      RPN VT + +L  C +L  L LG  +  L 
Sbjct: 376 SWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
               F     V+++LI M+ +CG++  A  +F  +  KN  TWN ++SGY  +    + L
Sbjct: 436 NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEAL 495

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKS 492
             F  +  S V   G TF  V+  C  +   +   +I  +++   GF       + ++  
Sbjct: 496 NLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDL 555

Query: 493 YVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQGHN 530
               G LD + +F            WGA++ A ++H+  N
Sbjct: 556 LGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/541 (21%), Positives = 222/541 (41%), Gaps = 5/541 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H  I+  G  ND+     L    S          +F  +   +L  + +++ A   N 
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
                + +Y  + K+    P+ F    V+    S+G     ++    A       + FVG
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVA---GFGSDLFVG 144

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            +++  Y K   VAAA +VF  +   D   WN M+ G        EA+ +   M+  GI 
Sbjct: 145 SAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIG 204

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D  T    L G + + D  +G  I  L ++        ++  L  +Y K   ++ A  +
Sbjct: 205 FDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLL 264

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F ++   D++S+N +  G++ N     +  LF + ++SG + N  +   L+        L
Sbjct: 265 FGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL 324

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            L   +       G +   +V+++L  ++ R   +E A  +FD  S K++ +WN ++SGY
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      +  F  + +  V  N  T   ++  C +     +   +H  I +  F S  
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNI 444

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           ++ ++LI  Y   G +  +    +     +  +W AM+S     G+ HEA+ +F+ ++ +
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHS 504

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              P      ++L +C+  G  +    I    V   GF       + ++D   + G++  
Sbjct: 505 RVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDK 564

Query: 603 A 603
           A
Sbjct: 565 A 565



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 150/315 (47%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   +A  L     L+   LG  +    +K+GF +  ++   L  +YSKCG       +F
Sbjct: 206 DSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLF 265

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            ++ + +LVS+  ++S    N E +  ++++ ++  +G   N  ++  ++ V    G   
Sbjct: 266 GQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLH 325

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               IH F  K  +  N  V  ++   Y++L ++ +A  +F   S   +  WNAMI GYA
Sbjct: 326 LTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYA 385

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   +A+++   M    +  +  T  + L  C+ +    +G+ +H LI R   E +I 
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  ALIDMY K   +  A ++F  M +K+ ++WN +  G+  +    +  +LF++ + S 
Sbjct: 446 VSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505

Query: 343 SRPNHVTFSILLRQC 357
             P  VTF  +L  C
Sbjct: 506 VSPTGVTFLSVLYAC 520



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 59/128 (46%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R +P+ +   LS    L +  LG  VH  I +  F ++IF+   LI MY+KCG      
Sbjct: 405 VRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQ 464

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+F  M E+N V+W  ++S    +G     L ++ +M  +   P      SV+  C   G
Sbjct: 465 RLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAG 524

Query: 160 ASEFGYSI 167
               G  I
Sbjct: 525 LVREGDEI 532


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 170/623 (27%), Positives = 305/623 (48%), Gaps = 28/623 (4%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           +E +  V  S+L  Y+K   VAAA  VF    +   D+  W AM    +  G   EAL +
Sbjct: 80  LETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRL 139

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDI-GRQIHGLIIRSEV-ECSISIVNALIDMY 291
               L EG+  + +T   A Q C     F + G  + GL+ +       +S+  ALIDM+
Sbjct: 140 FGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTDVSVGCALIDMF 199

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K+  +    +VF+ + ++ V+ W  L   ++++    +   LF   + +G +P+  T S
Sbjct: 200 AKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLS 259

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNV 408
            +L  C +L    LG QL  LAL  G   +  V+  L+ M+ +     ++  A  VF+ +
Sbjct: 260 SMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRM 319

Query: 409 SYKNITTWNELLSGYCFNCC-DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
              N+  W  LLSGY      D  V+  FC +   G+  N  T+  +++ C    +Q   
Sbjct: 320 PKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSG 379

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
            QIH   +K+  +    + ++L+  Y   G ++ +    +     +M S+   +      
Sbjct: 380 RQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG---D 436

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G ++         +E G     +  G+++++ A++G   + + +H   +K GF ++  + 
Sbjct: 437 GRSNTYQDYQIERMELG--ISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIG 494

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           ++++  Y++CG +  A   FD+  N ++VI + ++I   A HG  + A+E+F  M  A +
Sbjct: 495 NSLVSMYSRCGYLVDACQVFDE-MNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGV 553

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P+  T+++V+SACSH GLV +G   F+ M   +G+ P  + Y C+VD+L R+G +EDA 
Sbjct: 554 KPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDAL 613

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK------ 761
             I  MP Q    V+++LL  C+ H N ++GE A+  ++ L P++ A +VLLS       
Sbjct: 614 DFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAG 673

Query: 762 --------RKRQREGNLLDHEGV 776
                   R   R+ NL+  +G+
Sbjct: 674 LWDQVARIRSLMRDKNLMKEKGL 696



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 164/584 (28%), Positives = 277/584 (47%), Gaps = 26/584 (4%)

Query: 62  LGTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--RNLVSWTLIV 117
           LG  + GH+++ G     D  + N+L+ +YSKC        VFD M    R+LVSWT + 
Sbjct: 65  LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF----GYSIHCFALK 173
           S   +NG     L+++ +    G +PN F + +  + C    ASE     G ++     K
Sbjct: 125 SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACF---ASELFHLAGGAVLGLVFK 181

Query: 174 IRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +     +  VGC++++ +AK GD+ A  RVF  +    V  W  +I  YA  GY  EA+ 
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   ML  G   D+YT  + L  C+ +  F +G+Q+H L +R  +E    +   L+DMY 
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301

Query: 293 KS---SGMDYAFKVFERMADKDVISWNTLFGGFSEN-KNPGQTASLFHKFILSGSRPNHV 348
           KS     +  A +VF RM   +V++W  L  G+ +      Q   LF K +  G RPNH+
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T+S +L+ C  L D D G Q+    +     D   V ++L+ M+   G++E A   FD +
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQL 421

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF-FYVVETCCRSENQQMV 467
             KN+ +++  L G   +        T+ +     +E+   TF F  + +   S      
Sbjct: 422 YEKNMVSFSGNLDGDGRS-------NTYQDYQIERMELGISTFTFGSLISAAASVGMLTK 474

Query: 468 GQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           GQ +H   +K GF S   I +SL+  Y   G L ++ +  +     ++ SW +M+S L  
Sbjct: 475 GQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAK 534

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVY 585
            G+   A+ +FH ++ AG KP++     +L++C+  G  +  K     + K  G    + 
Sbjct: 535 HGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRME 594

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
             + ++D   + G ++ A    ++     D +V+ TL+ A   H
Sbjct: 595 HYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTH 638



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 137/529 (25%), Positives = 257/529 (48%), Gaps = 31/529 (5%)

Query: 63  GTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  V G + KLGF   D+ +   LI M++K G      RVFD + ER +V WTL+++   
Sbjct: 172 GGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYA 231

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G  D  +++++DM  NGF P+++ + S++  C  +G+   G  +H  AL++ +E +  
Sbjct: 232 QSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSC 291

Query: 182 VGCSVLNFYAKLGD---VAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSM 237
           V C +++ YAK  +   +  A  VF  +   +V  W A++ GY   G    + + +   M
Sbjct: 292 VSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKM 351

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           L EGI  +  T+ + L+ C+ + D D GRQIH   ++S +     + NAL+ MY +S  +
Sbjct: 352 LNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSI 411

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI--LLR 355
           + A   F+++ +K+++S       FS N +    ++ +  + +        TF+   L+ 
Sbjct: 412 EEARHAFDQLYEKNMVS-------FSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLIS 464

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
               +  L  G +L  L+L  GF  +  + +SL+ M+ RCG +  A  VFD ++  N+ +
Sbjct: 465 AAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVIS 524

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS-------ENQQMVG 468
           W  ++SG   +   A  L+ F ++  +GV+ N  T+  V+  C  +       E+ +M+ 
Sbjct: 525 WTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQ 584

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSAL-VH 526
           + HG I +    +C      ++      G ++++ +F N    ++D   W  ++ A   H
Sbjct: 585 KHHGLIPRMEHYAC------MVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTH 638

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
              +   +   H +    + P  Y+L  + N  A  G + +   I   +
Sbjct: 639 NNMDIGEIAANHVIQLEPQDPAPYVL--LSNLYAEAGLWDQVARIRSLM 685



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 187/409 (45%), Gaps = 22/409 (5%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL- 99
           + D   L+  LS    L S  LG Q+H   ++LG  +D  +   L+ MY+K  + G  L 
Sbjct: 252 QPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK-SHNGQSLH 310

Query: 100 ---RVFDEMAERNLVSWTLIVSAAIQNGEFD-MGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               VF+ M + N+++WT ++S  +Q G  D   + ++  M   G  PN     S++K C
Sbjct: 311 NAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKAC 370

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            ++G  + G  IH   +K  +     VG ++++ YA+ G +  A   F  +   ++  ++
Sbjct: 371 ANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFS 430

Query: 216 AMIGGYAHCG----YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             + G         Y  E + +       GI+   +TF + +   + V     G+++H L
Sbjct: 431 GNLDGDGRSNTYQDYQIERMEL-------GIS--TFTFGSLISAAASVGMLTKGQRLHAL 481

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            +++      +I N+L+ MY +   +  A +VF+ M D +VISW ++  G +++    + 
Sbjct: 482 SLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARA 541

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIY 390
             LFH  I +G +PN VT+  +L  C     +  G +  + +  H G +      + ++ 
Sbjct: 542 LELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVD 601

Query: 391 MFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCN 438
           +  R G VE A    + +  + +   W  LL G C    + D+ +   N
Sbjct: 602 LLGRSGLVEDALDFINEMPCQVDALVWKTLL-GACKTHNNMDIGEIAAN 649



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 142/320 (44%), Gaps = 31/320 (9%)

Query: 25  IHRLCGNNQ----FCS--DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           + R   +NQ    FC   +  +R + I  +  L    NL  +  G Q+H H VK    + 
Sbjct: 335 VQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADL 394

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
             + N L++MY++ G        FD++ E+N+VS++        N + D     Y D + 
Sbjct: 395 NVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFS-------GNLDGDGRSNTYQDYQI 447

Query: 139 NGFM--PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
                  + F  GS++    S+G    G  +H  +LK     +  +G S+++ Y++ G +
Sbjct: 448 ERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYL 507

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A +VF  ++  +V  W +MI G A  GY   AL +   M+  G+  +  T+I  L  C
Sbjct: 508 VDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSAC 567

Query: 257 S---LVAD----FDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           S   LV +    F + ++ HGLI R E   C       ++D+  +S  ++ A      M 
Sbjct: 568 SHAGLVKEGKEHFRMMQKHHGLIPRMEHYAC-------MVDLLGRSGLVEDALDFINEMP 620

Query: 309 -DKDVISWNTLFGGFSENKN 327
              D + W TL G    + N
Sbjct: 621 CQVDALVWKTLLGACKTHNN 640


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 167/621 (26%), Positives = 318/621 (51%), Gaps = 12/621 (1%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SS 208
           ++K C+    +  G  +H       +  +  +  S++  Y+K  D   A  +F S+  S 
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQ 267
            DV  ++++I  +A+     +A+ +   +L + G+  ++Y F   ++ C     F  G  
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 268 IHGLIIRS-EVECSISIVNALIDMYIKS---SGMDYAFKVFERMADKDVISWNTLFGGFS 323
           + G ++++   +  + +   LIDM++K    + ++ A KVF++M +K+V++W  +    +
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 324 ENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           +     +   LF + ++S G  P+  T + L+  C ++  L LG +L    +  G + + 
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC--CDADVLKTFCN-I 439
            V  SL+ M+ +CG V+ A  VFD +   N+ +W  L++GY       + + ++ F N +
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            + GV  N  TF  V++ C    +     Q+HG  IK G S+   + + L+  Y   G++
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRM 417

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +++ +  +     ++ S   +    V   + +    +   +   G     +   ++L+  
Sbjct: 418 ESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGA 477

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           A IG   + + IH  V+K+GF T++ V +A+I  Y+KCG+ + A   F+   + N VI +
Sbjct: 478 ACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCN-VITW 536

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
            ++I  +A HG  S+A+E+F  M    ++P+  T+++V+SACSH GL+D+    F SM  
Sbjct: 537 TSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRD 596

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
            +G+ P  + Y C+VD+L R+G L +A   I  MPF     V+R+ L  CR+H N +LGE
Sbjct: 597 NHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGE 656

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
            A++ +L   P + A ++LLS
Sbjct: 657 HAAKMILEREPHDPATYILLS 677



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 201/366 (54%), Gaps = 10/366 (2%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSM 158
           +VFD+M E+N+V+WTL+++   Q G  D  + ++++M  ++G++P+ F +  ++ VC  +
Sbjct: 216 KVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEI 275

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
                G  +H + ++  +  +  VGCS+++ YAK G V  A +VF  +   +V  W A++
Sbjct: 276 QFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALV 335

Query: 219 GGYAHCGYGF--EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIR- 274
            GY   G G+  EA+ + S+ML + G+  + +TF   L+ C+ + DFD G Q+HG  I+ 
Sbjct: 336 NGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKL 395

Query: 275 --SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
             S ++C   + N L+ +Y KS  M+ A K F+ + +K+++S   +     ++ N     
Sbjct: 396 GLSAIDC---VGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ 452

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
            L  +    GS  +  T++ LL     +  +  G Q+  + +  GF  + +V ++LI M+
Sbjct: 453 DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMY 512

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            +CG  E A  VF+++   N+ TW  +++G+  +   +  L+ F N+ E+GV+ N  T+ 
Sbjct: 513 SKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYI 572

Query: 453 YVVETC 458
            V+  C
Sbjct: 573 AVLSAC 578



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 253/554 (45%), Gaps = 41/554 (7%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           NN+  + S L K  I            K+  LG  +H  +       D  L N+LI +YS
Sbjct: 49  NNKLITSSLLLKQCI----------RTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYS 98

Query: 91  KCGYFGWGLRVFDEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFA 147
           K         +F  M  ++R++VS++ I+S    N      ++M+  +   +G  PNE+ 
Sbjct: 99  KSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYC 158

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK---LGDVAAAERVF 203
             +V++ C+  G  + G  +  F LK    + +  VGC +++ + K   L D+ +A +VF
Sbjct: 159 FTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVF 218

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF-EGITMDKYTFINALQGCSLVADF 262
             +   +V  W  MI   A  GY  EA+++   ML   G   D++T    +  C+ +   
Sbjct: 219 DKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFL 278

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
            +G+++H  +IRS +   + +  +L+DMY K   +  A KVF+ M + +V+SW  L  G+
Sbjct: 279 SLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGY 338

Query: 323 SENKN--PGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
                    +   +F   +L G   PN  TFS +L+ C  L D D G Q+    +  G  
Sbjct: 339 VRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLS 398

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC--FNCCDADVLKTFC 437
             + V + L+ ++ + G +E A   FD +  KN+ +   +       FN      L    
Sbjct: 399 AIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREV 458

Query: 438 NIWESGVEVNGCTFFYV--------VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
               SGV     +F Y         + T  + E      QIH  ++K GF +   + ++L
Sbjct: 459 EYVGSGVS----SFTYASLLSGAACIGTIGKGE------QIHAMVVKIGFRTDLSVNNAL 508

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           I  Y   G  + + +  N  E  ++ +W ++++     G   +A+ +F++++E G KP++
Sbjct: 509 ISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPND 568

Query: 550 YILGTILNSCAAIG 563
                +L++C+ +G
Sbjct: 569 VTYIAVLSACSHVG 582



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 21/303 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVHG  +KLG +    + N L+++Y+K G      + FD + E+NLVS T++    +
Sbjct: 384 FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++   +    +  +++  G   + F   S++     +G    G  IH   +KI    +  
Sbjct: 444 KDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLS 503

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ Y+K G+  AA +VF  +   +V  W ++I G+A  G+  +AL +  +ML  G
Sbjct: 504 VNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETG 563

Query: 242 ITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSE-VECSISIVNALIDMYIK 293
           +  +  T+I  L  CS V   D         R  HG++ R E   C       ++D+  +
Sbjct: 564 VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYAC-------MVDLLGR 616

Query: 294 SSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNP--GQTASLFHKFILSGSRPNHVTF 350
           S  +  A +    M  D D + W T  G    ++N   G+ A+   K IL     +  T+
Sbjct: 617 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAA---KMILEREPHDPATY 673

Query: 351 SIL 353
            +L
Sbjct: 674 ILL 676


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 286/538 (53%), Gaps = 18/538 (3%)

Query: 236 SMLFEGITMDKYTFINALQGC---SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           S + EG  ++   ++  LQ C    LV+D    ++IH  I+++       ++  L+++Y 
Sbjct: 59  SFIREGTKVESAFYVPILQECIDKKLVSD---AQKIHAHIVKTGAHKDAFLMTFLVNVYA 115

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   M+ A KVF+ +  ++V+SW TL  G+  +  P     +F + + +G+ P + T   
Sbjct: 116 KCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGT 175

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            L     L   +LG Q+   ++      + ++ +SL  ++ +CG++E A   F  +  KN
Sbjct: 176 ALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKN 235

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W  ++S +  N   A  L+ F  +    VE N  T    +  CC  ++  +  QIH 
Sbjct: 236 VISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHS 295

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA--------- 523
             IK GF S   I +S++  Y+  G +  + +  +  E + + +W AM++          
Sbjct: 296 LTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAK 355

Query: 524 --LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
             L       EA++IF  L  +G KPD +   ++L+ C+++ A ++ + +H   IK GF 
Sbjct: 356 DDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFL 415

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++V V +A+++ Y KCG I+ A  AF +  +   +I + ++I  YA +G   +A+ +F+ 
Sbjct: 416 SDVVVGTALVNMYNKCGSIERASKAFVE-MSIRTLISWTSMITGYAQNGQPQQALLLFED 474

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M+LA ++P++ TFV V+SACSH G+VD+    F+ M ++Y + P  D Y CL+DM  R G
Sbjct: 475 MRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLG 534

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            L++A   I+ M  +P+  ++  L++GCR  G  ELG +A+E+LL L PK+   + LL
Sbjct: 535 RLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLL 592



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 232/458 (50%), Gaps = 22/458 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H HIVK G   D FL   L+ +Y+KCG      +VFDE+  RN+VSWT +++  + + 
Sbjct: 90  KIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDS 149

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           + ++ ++++ +M   G  P  + +G+ +     + + E G  IH +++K RIE +  +G 
Sbjct: 150 KPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGN 209

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+ + Y+K G +  A + F  I   +V  W  +I  +   G     L     ML E +  
Sbjct: 210 SLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEP 269

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  +AL  C ++   DIG QIH L I+   E ++ I N+++ +Y+K   +  A K+F
Sbjct: 270 NEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLF 329

Query: 305 ERMADKDVISWNTLFGG-----------FSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
           + M    +++WN +  G            + ++   +  S+F K   SG +P+  TFS +
Sbjct: 330 DEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSV 389

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  L+ L+ G Q+    +  GFL +  V ++L+ M+ +CG++E A   F  +S + +
Sbjct: 390 LSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTL 449

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI--H 471
            +W  +++GY  N      L  F ++  +GV  N  TF  V+  C  +    MV +   +
Sbjct: 450 ISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHA---GMVDEALDY 506

Query: 472 GAIIKTGFSSCG----YICSSLIKSYVNFGQLDNSFEF 505
             ++K  +        Y C  LI  +V  G+LD +F+F
Sbjct: 507 FQMMKNEYKITPVMDHYAC--LIDMFVRLGRLDEAFDF 542



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 136/575 (23%), Positives = 250/575 (43%), Gaps = 49/575 (8%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C+          IH   +K    K+ F+   ++N YAK G +  A +VF  +   +
Sbjct: 75  ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRN 134

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W  ++ GY H      A+ V   ML  G     YT   AL   S +   ++G+QIHG
Sbjct: 135 VVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHG 194

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
             I+  +E   SI N+L  +Y K   ++ A K F R+ DK+VISW T+   + +N     
Sbjct: 195 YSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAAT 254

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F + +     PN  T +  L  C  +  LD+G Q+  L +  GF     + +S++Y
Sbjct: 255 GLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNLPIKNSIMY 314

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY-----------CFNCCDADVLKTFCNI 439
           ++ +CG +  A  +FD +   ++ TWN +++G+             + C  + L  F  +
Sbjct: 315 LYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKL 374

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             SG++ +  TF  V+  C      +   Q+H   IKTGF S   + ++L+  Y   G +
Sbjct: 375 NRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSI 434

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           + + +         + SW +M++     G   +A+ +F  +  AG +P++     +L++C
Sbjct: 435 ERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSAC 494

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +  G           +         Y  + V+D YA                        
Sbjct: 495 SHAGMVDEALDYFQMM------KNEYKITPVMDHYA------------------------ 524

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             LI  +   G + EA   FD +K  +L+P++  +  +++ C  +G ++ G   F + + 
Sbjct: 525 -CLIDMFVRLGRLDEA---FDFIKEMDLEPNEFIWSILIAGCRSQGKLELG---FYAAEQ 577

Query: 680 QYGMQPS-PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
              ++P   + Y  L++M    G  ++   V ++M
Sbjct: 578 LLNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMM 612



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 197/391 (50%), Gaps = 17/391 (4%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L  +LS S +L S+ LG Q+HG+ +K     D  + N+L ++YSKCG     ++ F  + 
Sbjct: 173 LGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIR 232

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           ++N++SWT ++SA   NGE   GL+ +V+M +    PNEF + S + +C  M + + G  
Sbjct: 233 DKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQ 292

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA---- 222
           IH   +K+  E N  +  S++  Y K G +  A+++F  + +  +  WNAMI G+A    
Sbjct: 293 IHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMD 352

Query: 223 ---------HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
                     CG   EAL++   +   G+  D +TF + L  CS +   + G Q+H   I
Sbjct: 353 FAKDDLAAHQCGT--EALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTI 410

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           ++     + +  AL++MY K   ++ A K F  M+ + +ISW ++  G+++N  P Q   
Sbjct: 411 KTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALL 470

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMF 392
           LF    L+G RPN +TF  +L  C     +D  L   Q +          +  + LI MF
Sbjct: 471 LFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMF 530

Query: 393 CRCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
            R G ++ A      +  + N   W+ L++G
Sbjct: 531 VRLGRLDEAFDFIKEMDLEPNEFIWSILIAG 561


>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  266 bits (679), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 169/575 (29%), Positives = 290/575 (50%), Gaps = 18/575 (3%)

Query: 185 SVLNFYA-----KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           S+LN YA     + G V    R+F ++   +V  WN + G Y   G   EAL + + ML 
Sbjct: 142 SLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLE 201

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGM 297
           +G+     +F+N         D      ++GL+I+  VE    + +V++ I M+ + S +
Sbjct: 202 DGVRPTPVSFVNVFPAAG-SGDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDV 260

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV-TFSILLRQ 356
             A  VF+R   K++  WNT+  G+ +N    Q   LF + + S   P+ V TF   +  
Sbjct: 261 QSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTA 320

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             +  D+ LG QL    L  G      V   ++L+ M+ RCG V+ A  +FD +  K+I 
Sbjct: 321 ASQSQDVRLGQQLHGY-LMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIV 379

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN +++ +  N  D + L     + +SG   +  T   V+     + + Q+  Q HG +
Sbjct: 380 SWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYL 439

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSALVHQGHNHEA 533
           I+ G    G + S LI  Y   G++D +    +G     D  +W AM++     G   +A
Sbjct: 440 IRHGIEGEG-LESYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQA 498

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ-RTKSIHPFVIKLGFNTEVYVASAVID 592
           V  F +++EAG +P    L ++L +C  +G      K IH F ++   +T V+V +A++D
Sbjct: 499 VLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVD 558

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG+I  A   F         + Y T+I     HG    A+ +F  M+   L+P   
Sbjct: 559 MYSKCGEISAAENVFG-GMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAV 617

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF++ +SAC++ GLVD+G  L++SM++ +G+  +P  + C+VD+L++ G +++A   +E 
Sbjct: 618 TFLAAISACNYSGLVDEGLSLYRSMET-FGLAATPQHHCCIVDLLAKAGRVDEAYDFVES 676

Query: 713 MPFQPS-PTVYRSLLSGCRIHGNKELGEWASEKLL 746
           +    +   ++ SLL+ C+  G  EL  WA+EK+L
Sbjct: 677 LGEDGNFIAIWGSLLASCKAQGKMELAAWATEKVL 711



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/552 (24%), Positives = 260/552 (47%), Gaps = 17/552 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWG-----LRVFDEMAERNLVSWTLIVS 118
           VH H+++      +   L+N+L+ +Y+ C     G      R+FD M ++N+VSW  +  
Sbjct: 122 VHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFG 181

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE- 177
             ++ G  D  L+M+  M  +G  P   +  +V     S G   + + ++   +K  +E 
Sbjct: 182 WYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGS-GDPSWPFLLYGLLIKHGVEY 240

Query: 178 -KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             + FV  S +  ++++ DV +A  VF      ++  WN MI GY   G   +A+++   
Sbjct: 241 VNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQ 300

Query: 237 ML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV--NALIDMYIK 293
           +L  + +  D  TF++A+   S   D  +G+Q+HG +++  +  ++ ++  NAL+ MY +
Sbjct: 301 ILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKG-MHSTLPVILGNALVVMYSR 359

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  AF++F+R+ +KD++SWNT+   F +N    +   L ++   SG  P+ VT + +
Sbjct: 360 CGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAV 419

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KN 412
           L       DL +G Q     +  G ++ E + S LI M+ + G ++MA  VFD     ++
Sbjct: 420 LSAASNTGDLQIGKQSHGYLIRHG-IEGEGLESYLIDMYSKSGRIDMAQRVFDGYGNDRD 478

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG-QIH 471
             TWN +++GY  +      +  F  + E+GVE    T   V+  C         G QIH
Sbjct: 479 EVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIH 538

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
              ++    +  ++ ++L+  Y   G++  +     G       ++  M+S L   G   
Sbjct: 539 SFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGE 598

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            A+++F+S+ + G KPD       +++C   G      S++  +   G          ++
Sbjct: 599 RALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATPQHHCCIV 658

Query: 592 DAYAKCGDIKGA 603
           D  AK G +  A
Sbjct: 659 DLLAKAGRVDEA 670



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 225/473 (47%), Gaps = 13/473 (2%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           ++G ++K G  + ND+F+ ++ I M+S+         VFD   ++N+  W  +++  +QN
Sbjct: 229 LYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQN 288

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFALKIRIEKNP 180
           G+F   + +++ +  +  +P++  V + +    +   S+    G  +H + +K      P
Sbjct: 289 GQFSQAMDLFIQILGSKEVPSD--VVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLP 346

Query: 181 FV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
            + G +++  Y++ G+V  A  +F  +   D+  WN MI  +    +  E L +V  M  
Sbjct: 347 VILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQK 406

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            G   D  T    L   S   D  IG+Q HG +IR  +E    + + LIDMY KS  +D 
Sbjct: 407 SGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLIDMYSKSGRIDM 465

Query: 300 AFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
           A +VF+    D+D ++WN +  G++++  P Q    F   I +G  P  VT + +L  C 
Sbjct: 466 AQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACD 525

Query: 359 KL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +   +  G Q+   AL         V ++L+ M+ +CG +  A +VF  ++ K+  T+ 
Sbjct: 526 PVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYT 585

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            ++SG   +      L  F ++ + G++ +  TF   +  C  S        ++ ++   
Sbjct: 586 TMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETF 645

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEF--SNGAERLDMASWGAMMSALVHQG 528
           G ++       ++      G++D +++F  S G +   +A WG+++++   QG
Sbjct: 646 GLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLASCKAQG 698



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 194/401 (48%), Gaps = 14/401 (3%)

Query: 27  RLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNL 85
           ++ G+ +  SD        FL+   + S++   R LG Q+HG+++K +  T  + L N L
Sbjct: 300 QILGSKEVPSDVV-----TFLSAVTAASQSQDVR-LGQQLHGYLMKGMHSTLPVILGNAL 353

Query: 86  IAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPN 144
           + MYS+CG       +FD + E+++VSW  +++A +QN +FD+ GL +   M+ +GF+P+
Sbjct: 354 VVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQN-DFDLEGLLLVYQMQKSGFIPD 412

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
              + +V+    + G  + G   H + ++  IE    +   +++ Y+K G +  A+RVF 
Sbjct: 413 TVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEG-LESYLIDMYSKSGRIDMAQRVFD 471

Query: 205 SISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADF 262
              +D D   WNAMI GY   G   +A+    +M+  G+     T  + L  C  V    
Sbjct: 472 GYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGV 531

Query: 263 DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
             G+QIH   +R  ++ ++ +  AL+DMY K   +  A  VF  M +K  +++ T+  G 
Sbjct: 532 CAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGL 591

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            ++    +  SLF+     G +P+ VTF   +  C     +D GL L       G     
Sbjct: 592 GQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATP 651

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKN--ITTWNELLS 421
                ++ +  + G V+ A+   +++      I  W  LL+
Sbjct: 652 QHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLA 692



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 151/325 (46%), Gaps = 17/325 (5%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
            D + L   LS + N     +G Q HG++++ G   +  L++ LI MYSK G      RV
Sbjct: 411 PDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLIDMYSKSGRIDMAQRV 469

Query: 102 FDEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           FD    +R+ V+W  +++   Q+G+ +  +  +  M   G  P    + SV+  C  +G 
Sbjct: 470 FDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGG 529

Query: 161 SE-FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH FAL+  ++ N FVG ++++ Y+K G+++AAE VF  ++      +  MI 
Sbjct: 530 GVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMIS 589

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH------GLII 273
           G    G+G  AL++  SM  +G+  D  TF+ A+  C+     D G  ++      GL  
Sbjct: 590 GLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAA 649

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVIS-WNTLFGGFSENKNPGQT 331
             +  C I      +D+  K+  +D A+   E +  D + I+ W +L             
Sbjct: 650 TPQHHCCI------VDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLASCKAQGKMELA 703

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQ 356
           A    K +    +  H  +++LL Q
Sbjct: 704 AWATEKVLNIEKQYGHAGYNVLLSQ 728



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 187/422 (44%), Gaps = 29/422 (6%)

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG--FLDEENVTSSLIY 390
           +L +       R +H T+S  L  C +   L LG  +    L       D   + +SL+ 
Sbjct: 86  ALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLN 145

Query: 391 MFCRC-----GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++  C     G V++   +FD +  KN+ +WN L   Y       + L+ F  + E GV 
Sbjct: 146 LYASCARHRRGGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVR 205

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG--YICSSLIKSYVNFGQLDNSF 503
               +F  V      S +      ++G +IK G       ++ SS I  +     + ++ 
Sbjct: 206 PTPVSFVNVFPAAG-SGDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSAR 264

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              + A + ++  W  M++  V  G   +A+ +F  ++ + E P + +  T L++  A  
Sbjct: 265 MVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVV--TFLSAVTAAS 322

Query: 564 AYQRTK---SIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
             Q  +    +H +++K   +T  V + +A++  Y++CG+++ A   FD+     D++ +
Sbjct: 323 QSQDVRLGQQLHGYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDR-LPEKDIVSW 381

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-----KGCLLF 674
           NT+I A+  +    E + +  +M+ +   P   T  +V+SA S+ G +       G L+ 
Sbjct: 382 NTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIR 441

Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
             ++ + G++        L+DM S++G ++ A+ V +          + ++++G    G 
Sbjct: 442 HGIEGE-GLE------SYLIDMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQ 494

Query: 735 KE 736
            E
Sbjct: 495 PE 496


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 255/496 (51%), Gaps = 5/496 (1%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSE 324
           QIH  ++ +    S++ +N L+ +Y K   + +   +F        +V++W TL    S 
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           +  P Q  + F++   +G  PNH TFS +L  C     L  G Q+  L     FL++  V
Sbjct: 178 SNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++L+ M+ +CG++ +A +VFD + ++N+ +WN ++ G+  N      +  F  +   G 
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGP 297

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           +    +   V+  C          Q+HG+I+K G     Y+ +SL+  Y   G  +++ +
Sbjct: 298 D--QVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATK 355

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G    D+ +W  M+       +  +A T F +++  G +PDE    ++ ++ A+I A
Sbjct: 356 LFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAA 415

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
             +   IH  V+K G      ++S+++  Y KCG +  A   F ++   ++V+ +  +I 
Sbjct: 416 LTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRET-KEHNVVCWTAMIT 474

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            +  HG  +EA+++F++M    + P   TFVSV+SACSH G +D G   F SM + + ++
Sbjct: 475 VFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIK 534

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
           P  + Y C+VD+L R G LE+A   IE MPF+P   V+ +LL  C  H N E+G   +E+
Sbjct: 535 PGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAER 594

Query: 745 LLLLLPKNDAAHVLLS 760
           L  L P N   ++LLS
Sbjct: 595 LFKLEPDNPGNYMLLS 610



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/530 (24%), Positives = 224/530 (42%), Gaps = 37/530 (6%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--R 108
           L+ +  LKS    TQ+H  +V       +   N L+ +Y+KCG     L +F+       
Sbjct: 104 LNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPST 163

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           N+V+WT +++   ++ +    L  +  M+T G  PN F   +++  C        G  IH
Sbjct: 164 NVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIH 223

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
               K     +PFV  ++L+ YAK G +  AE VF  +   ++  WN+MI G+       
Sbjct: 224 ALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYG 283

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
            A+ V   +L  G   D+ +  + L  C+ + + D G+Q+HG I++  +   + + N+L+
Sbjct: 284 RAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLV 341

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K    + A K+F    D+DV++WN +  G    +N  Q  + F   I  G  P+  
Sbjct: 342 DMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEA 401

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           ++S L      +  L  G  +    L  G +    ++SSL+ M+ +CG++  A+ VF   
Sbjct: 402 SYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRET 461

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
              N+  W  +++ +  + C  + +K F  +   GV     TF  V+  C          
Sbjct: 462 KEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACS--------- 512

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
             H   I  GF                F  + N      G E      +  M+  L   G
Sbjct: 513 --HTGKIDDGFKY--------------FNSMANVHNIKPGLEH-----YACMVDLLGRVG 551

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
              EA     S+     +PD  + G +L +C      +  + +   + KL
Sbjct: 552 RLEEACRFIESM---PFEPDSLVWGALLGACGKHANVEMGREVAERLFKL 598



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 2/290 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D + ++  LS    L     G QVHG IVK G    ++++N+L+ MY KCG F    
Sbjct: 295 LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDAT 354

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F    +R++V+W +++    +   F+     +  M   G  P+E +  S+     S+ 
Sbjct: 355 KLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIA 414

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A   G  IH   LK    KN  +  S++  Y K G +  A +VF      +V CW AMI 
Sbjct: 415 ALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMIT 474

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVE 278
            +   G   EA+ +   ML EG+  +  TF++ L  CS     D G +  + +     ++
Sbjct: 475 VFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIK 534

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
             +     ++D+  +   ++ A +  E M  + D + W  L G   ++ N
Sbjct: 535 PGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHAN 584



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 84/171 (49%), Gaps = 5/171 (2%)

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
           PD   L  +LN+ A + + +    IH  ++    +  +   + ++  YAKCG I    + 
Sbjct: 98  PD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154

Query: 607 FDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
           F+     S +V+ + TLI   +      +A+  F++M+   + P+  TF +++ AC+H  
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           L+ +G  +  ++  ++     P     L+DM ++ G +  A++V + MP +
Sbjct: 215 LLSEGQQI-HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHR 264


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 164/589 (27%), Positives = 292/589 (49%), Gaps = 34/589 (5%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           KN F    +L+ Y+  GD+ AA+ +F S    +   W  M+  +A  G   +AL++  +M
Sbjct: 286 KNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAM 345

Query: 238 LFEGITMDKYTFINALQ--GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           L EG+  D+ T    L   GC++ +       +H   I+  ++  + + N L+D Y K  
Sbjct: 346 LGEGVIPDRVTVTTVLNLPGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHG 398

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG--SRPNHV-TFSI 352
            +  A +VF  M DKD +++N +  G S+     Q   LF     +G    P H+  +S 
Sbjct: 399 LLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSH 458

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
              +   +L++                    V +SL+  + +C  ++    +FD +  ++
Sbjct: 459 SRSRSTSVLNV-------------------FVNNSLLDFYSKCDCLDDMRRLFDEMPERD 499

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             ++N +++ Y +N C A VL+ F  + + G +     +  ++       +  +  QIH 
Sbjct: 500 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 559

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNH 531
            ++  G +S   + ++LI  Y   G LD +   FSN +E+    SW A+++  V  G + 
Sbjct: 560 QLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEK-SAISWTALITGYVQNGQHE 618

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           EA+ +F  +  AG +PD     +I+ + +++      + +H ++I+ G+ + V+  S ++
Sbjct: 619 EALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLV 678

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D YAKCG +  A   FD+    N  I +N +I AYAH+G    A+++F+ M      P  
Sbjct: 679 DMYAKCGCLDEALRTFDEMPERNS-ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 737

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            TF+SV++ACSH GL D+    F  M  QY + P  + Y C++D L R G     + ++ 
Sbjct: 738 VTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLV 797

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            MPF+  P ++ S+L  CRIHGN+EL   A++KL  + P +   +V+LS
Sbjct: 798 EMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILS 846



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 157/643 (24%), Positives = 286/643 (44%), Gaps = 52/643 (8%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTN----DIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           L+   NL  R L +  H H  +  F      +IF  N +++ YS  G       +F    
Sbjct: 256 LTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSP 315

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV--CVSMGASEFG 164
            RN  +WT+++ A    G     L ++  M   G +P+   V +V+ +  C         
Sbjct: 316 HRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVP------ 369

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            S+H FA+K  ++ + FV  ++L+ Y K G +AAA RVF  +   D   +NAM+ G +  
Sbjct: 370 -SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKE 428

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +AL + ++M   G +      +      S                RS    ++ + 
Sbjct: 429 GLHTQALQLFAAMRRAGYSRHPLHLLQYSHSRS----------------RSTSVLNVFVN 472

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L+D Y K   +D   ++F+ M ++D +S+N +   ++ N+       LF +    G  
Sbjct: 473 NSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFD 532

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
              + ++ +L   G L D+ +G Q+    +  G   E+ + ++LI M+ +CG ++ A S 
Sbjct: 533 RQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 592

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F N S K+  +W  L++GY  N    + L+ F ++  +G+  +  TF  +++    S + 
Sbjct: 593 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKA---SSSL 649

Query: 465 QMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
            M+G   Q+H  +I++G+ S  +  S L+  Y   G LD +    +     +  SW A++
Sbjct: 650 AMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVI 709

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGF 580
           SA  H G    A+ +F  ++  G  PD     ++L +C+  G A +  K  H    +   
Sbjct: 710 SAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSI 769

Query: 581 NTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
           +      + VID   + G      +M  +  F + D I++ +++ +   HG    A    
Sbjct: 770 SPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA-DPIIWTSILHSCRIHGNQELARVAA 828

Query: 640 DKMKLANLQPSQATFVSVMS------------ACSHKGLVDKG 670
           D  KL  ++P+ AT   ++S            AC  K + D+G
Sbjct: 829 D--KLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRG 869



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 108/210 (51%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A  LS++ +L    +G Q+H  +V LG  ++  L N LI MYSKCG        F   +E
Sbjct: 539 ATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSE 598

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           ++ +SWT +++  +QNG+ +  L+++ DM+  G  P+     S++K   S+     G  +
Sbjct: 599 KSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQL 658

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H + ++   + + F G  +++ YAK G +  A R F  +   +   WNA+I  YAH G  
Sbjct: 659 HSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEA 718

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCS 257
             A+ +   ML  G   D  TF++ L  CS
Sbjct: 719 KNAIKMFEGMLHCGFNPDSVTFLSVLAACS 748



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 65/123 (52%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR D    +  +  S +L    LG Q+H ++++ G+ + +F  + L+ MY+KCG     L
Sbjct: 632 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 691

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R FDEM ERN +SW  ++SA    GE    +KM+  M   GF P+     SV+  C   G
Sbjct: 692 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 751

Query: 160 ASE 162
            ++
Sbjct: 752 LAD 754


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 182/616 (29%), Positives = 307/616 (49%), Gaps = 22/616 (3%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           A+   +K   ++  +    +IH  AL+  +    +P V  ++L  YA+ G +AAA  VF 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 205 SIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS----L 258
           SIS  + D   +N++I           AL  + +ML  G  +  +T ++ L+  S     
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 259 VADFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADK--DVIS 314
            A   +GR+ H   +++ +         NAL+ MY +   +  A ++F        DV++
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WNT+     ++    +     +  +  G RP+ VTF+  L  C +L  LD+G ++    +
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 375 HCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTWNELLSGYCFNCCDAD 431
               L   + V S+L+ M+     V  A  VFD V  S K +  WN ++ GY     D +
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358

Query: 432 VLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
            L+ F  +  E+G      T   V+  C RSE       +HG ++K G +   ++ ++L+
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 418

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI---FHSLVEAGEKP 547
             Y   G+ D +       +  D+ SW  +++  V QGH  +A  +      L E G  P
Sbjct: 419 DMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 478

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +   L T+L  CA + A  R K IH + ++   +T+V V SA++D YAKCG +  +R  F
Sbjct: 479 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 538

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGL 666
           D+     + I +N LIMAY  HGL  EA  +FD+M  +   +P++ TF++ ++ACSH G+
Sbjct: 539 DR-LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 597

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRSL 725
           VD+G  LF +M+  +G++P+PD   C+VD+L R G L++A  ++  M   +   + + ++
Sbjct: 598 VDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTM 657

Query: 726 LSGCRIHGNKELGEWA 741
           L  CR+H N  LGE A
Sbjct: 658 LGACRLHRNVHLGEIA 673



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 15/477 (3%)

Query: 62  LGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIV 117
           LG + H   +K G  +    F  N L++MY++ G      R+F        ++V+W  +V
Sbjct: 184 LGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 243

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRI 176
           S  +Q+G FD  ++   DM   G  P+     S +  C  +   + G  +H + +K   +
Sbjct: 244 SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 303

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             N FV  ++++ YA    V  A +VF  +  S   +G WNAMI GYA  G   EAL + 
Sbjct: 304 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 363

Query: 235 SSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           + M  E G    + T  + L  C+    F     +HG +++  +  +  + NAL+DMY +
Sbjct: 364 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 423

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTASLFHKFILSGSRPNHVTF 350
               D A ++F  +   DV+SWNTL  G        +  Q A    +    G  PN +T 
Sbjct: 424 LGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 483

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             LL  C  L     G ++   A+      +  V S+L+ M+ +CG + ++ +VFD +  
Sbjct: 484 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPR 543

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQ 469
           +N  TWN L+  Y  +    +    F  +  SG    N  TF   +  C  S       Q
Sbjct: 544 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 603

Query: 470 IHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE--RLDMASWGAMMSA 523
           +  A+ +  G      I + ++      G+LD ++      E     +++W  M+ A
Sbjct: 604 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGA 660



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 193/396 (48%), Gaps = 12/396 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D +  A +L     L+   +G ++H +++K      + F+ + L+ MY+     G  
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 99  LRVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVC 155
            +VFD + +  + L  W  ++    Q G  +  L+++  M+   GF+P E  + SV+  C
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
               A     ++H + +K  +  N FV  ++++ YA+LG    A R+F  +   DV  WN
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 446

Query: 216 AMIGG---YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            +I G     H    F+    +  +   G+  +  T +  L GC+++A    G++IHG  
Sbjct: 447 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +R  ++  +++ +AL+DMY K   +  +  VF+R+  ++ I+WN L   +  +   G+  
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566

Query: 333 SLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
            LF +   SG +RPN VTF   L  C     +D GLQL   +    G     ++ + ++ 
Sbjct: 567 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVD 626

Query: 391 MFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYC 424
           +  R G ++ A+++  ++    + ++ W+ +L G C
Sbjct: 627 ILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML-GAC 661


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 183/743 (24%), Positives = 341/743 (45%), Gaps = 20/743 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L   L++   G +VH HI +     + F+ N+L+ MY+  G  G   R+FD +   N+
Sbjct: 70  LQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNI 129

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +S+T I+ A +  G+ D  LK+    +   F  +   +   ++          G   H  
Sbjct: 130 LSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDT 189

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAA----ERVFYSISSDDVGCWNAMIGG-YAHCG 225
             +   + +  V  S++  Y+  G++ AA    +R F    S DV  W  ++     H  
Sbjct: 190 IRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRD 249

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           Y   AL++   M  +G+  D+  F+  L     + D   G++IH +++  E+E    I  
Sbjct: 250 Y-IGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGT 308

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           A++ MY +   +  A + F+R+    V +W  L G +    +      +  +    G +P
Sbjct: 309 AVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKP 368

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLA--LHCGFLDEE-NVTSSLIYMFCRCGAVEMAH 402
           N VTF  +L  C K L L+ G ++Q LA       LD    + +++I MF R  ++ +A 
Sbjct: 369 NEVTFITILDTC-KNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAR 427

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
             FD +S K++  +  +++GY  N    + L  F  +    V  +       +  C    
Sbjct: 428 EAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIP 487

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           + +    +H + +  G      + ++L+  Y   G ++++       ER D  +W AM++
Sbjct: 488 DLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIA 547

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFN 581
           AL   G    AV +   + + G +P    +  +L +CA  G  +   + +H  ++  GF+
Sbjct: 548 ALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFD 607

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG---LVSEAMEI 638
           ++  V  AV+  YAK G I+ A  AFD+  N  DV  + T++ AY   G       A+++
Sbjct: 608 SDPEVKFAVMRMYAKVGSIQEACNAFDKIENP-DVKAWTTMLEAYCRLGKYNASDRALKL 666

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
              M+   + P + TFV +++AC++ G + +    FK M   YG+ P  + Y  LVD ++
Sbjct: 667 ARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVA 726

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL----LLLPKNDA 754
           R GYL++A+ +I ++P Q +  ++ +LL  C+   +    +   E ++     L P    
Sbjct: 727 RKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTG 786

Query: 755 AHVLLSK-RKRQREGNLLDHEGV 776
           AH + ++  + +R   L+   G+
Sbjct: 787 AHRVAARWEEAKRVRKLMTDRGI 809



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/575 (23%), Positives = 263/575 (45%), Gaps = 13/575 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + DP  LA ++  +   +   LG   H  I + G+  D  +  +LI MYS CG     ++
Sbjct: 161 KADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQ 220

Query: 101 VFDEMAER----NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
            FD    R    ++VSWT I++A  ++ ++   L ++  M+  G +P+     +V+   +
Sbjct: 221 AFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVI 280

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
            +G    G  IH   L   +E++  +G +V+  YA++G +  A R F  I    V  W  
Sbjct: 281 GLGDIAQGKRIHSMVLDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTV 340

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +IG Y   G     + ++  M  EG+  ++ TFI  L  C  +A  + G++I  L    +
Sbjct: 341 LIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQQ 399

Query: 277 ---VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
              ++ S  I  A+I M+ + S M  A + F++++ K V ++  +  G++ NK P +  +
Sbjct: 400 QRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALA 459

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +F + I      +++  ++ +  C  + DL+ G  L C A+  G   ++ V ++L+ M+ 
Sbjct: 460 IFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYS 519

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           RCG++E A +VF  +   +   W+ +++    +      +     + + G    G T   
Sbjct: 520 RCGSMEDASAVFGEIERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVG 579

Query: 454 VVETCCRSE-NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           V+  C  +   ++   ++H  ++  GF S   +  ++++ Y   G +  +    +  E  
Sbjct: 580 VLAACAHAGMMEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENP 639

Query: 513 DMASWGAMMSALVHQGH---NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT- 568
           D+ +W  M+ A    G    +  A+ +   + + G  PD+     IL +CA  G  Q   
Sbjct: 640 DVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAG 699

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           +         G   E+    A++D  A+ G ++ A
Sbjct: 700 RYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEA 734



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/606 (21%), Positives = 275/606 (45%), Gaps = 16/606 (2%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V+++C  + A   G  +H    + R+E   FVG  ++  YA  G+   A R+F  + S +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           +  + A++  Y   G   EAL ++     +    D      A++   +  D  +GR  H 
Sbjct: 129 ILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHD 188

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE----RMADKDVISWNTLFGGFSENK 326
            I R   +    +  +LI MY     ++ A + F+    R    DV+SW  +    +E++
Sbjct: 189 TIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHR 248

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +      LF +    G  P+ + F  +L     L D+  G ++  + L      +  + +
Sbjct: 249 DYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMIGT 308

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +++ M+ R G+++ A   FD +    +  W  L+  YC       V++    +   GV+ 
Sbjct: 309 AVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKP 368

Query: 447 NGCTFFYVVETC--CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           N  TF  +++TC     E+ + +  +     +    +   I +++I  +  F  +  + E
Sbjct: 369 NEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILARE 428

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +   +  +A++ AM++   +     EA+ IF  ++      D  +L   +++CA+I  
Sbjct: 429 AFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPD 488

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +  K++H   + LG + +  V +A++D Y++CG ++ A   F +     D I ++ +I 
Sbjct: 489 LEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE-IERPDTIAWSAMIA 547

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           A   HG    A+ +  +M+    +P+ AT V V++AC+H G++++      S+    G  
Sbjct: 548 ALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFD 607

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG-CRIHGNKELGEW-AS 742
             P+    ++ M ++ G +++A +  + +   P    + ++L   CR      LG++ AS
Sbjct: 608 SDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR------LGKYNAS 660

Query: 743 EKLLLL 748
           ++ L L
Sbjct: 661 DRALKL 666



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 217/504 (43%), Gaps = 17/504 (3%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           E   +D Y  +  LQ C+ +     G ++H  I RS +E    + N L+ MY        
Sbjct: 59  EPFDVDSYQHV--LQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGE 116

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++F+ +   +++S+  +   +    +P +   + H   L   + +    ++ +   G 
Sbjct: 117 ARRIFDGLGSHNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGM 176

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK----NITT 415
             DL LG         CG+  +  V  SLI M+  CG +E A   FD    +    ++ +
Sbjct: 177 KRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVS 236

Query: 416 WNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           W ++L+  C    D    L  F  + E GV  +   F  V+++     +     +IH  +
Sbjct: 237 WTKILAA-CNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMV 295

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +         I ++++K Y   G + ++    +  ++  +A+W  ++ A    G  +  +
Sbjct: 296 LDRELERDSMIGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVM 355

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCA--AIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            I   +   G KP+E    TIL++C   A+   ++ +++     +   +    + +AVI 
Sbjct: 356 QILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIG 415

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            +++   +  AR AFD+  +   V  Y  +I  YA++    EA+ IF +M    +     
Sbjct: 416 MFSRFSSMILAREAFDK-ISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNL 474

Query: 653 TFVSVMSACSHKGLVDKGCLLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI- 710
                +SAC+    +++G  L   +MD   G+         LVDM SR G +EDA  V  
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMD--LGLHRDDVVRTALVDMYSRCGSMEDASAVFG 532

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGN 734
           EI   +P    + ++++    HG+
Sbjct: 533 EIE--RPDTIAWSAMIAALGRHGD 554


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/666 (25%), Positives = 313/666 (46%), Gaps = 31/666 (4%)

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGL--KMYVDMKTNGFMPNEFAVGS--VMKVCV 156
           +F       LV +  I+ A +   EF   L  K Y+   +    P+  A+ +  +   C+
Sbjct: 24  LFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCL 83

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
             G ++F   IH             V  S+++ Y KLG  + A  +F  +S  DV  WN 
Sbjct: 84  KRGVNQF---IH-------------VHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNV 127

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I GY+  GY + A+ +   ML E    ++ T ++ L  C        GR IHG  I++ 
Sbjct: 128 LICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAG 187

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
                 + NAL+ MY K   ++ +  +F+ M +K V+SWNT+ G + +N    +    F 
Sbjct: 188 FGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFK 247

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           + +  G  P+ VT   L+              + C  + CGF ++ +V +SL+ ++ + G
Sbjct: 248 EMLKEGFHPSSVTIMNLVSANA------FPENVHCYVVKCGFTNDASVVTSLVCLYAKQG 301

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
               A  ++     K++ T   ++S Y         ++ F    +  ++ +      V+ 
Sbjct: 302 FTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH 361

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                 +  +    HG  +K+G S+   + + LI  Y  F +++ +           + +
Sbjct: 362 GITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLIT 421

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           W +M+S  V  G + +A+ +F  +   G+KPD   + ++L+ C  +G  +  +++H +++
Sbjct: 422 WNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYIL 481

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND--VIVYNTLIMAYAHHGLVSE 634
           +     E ++ +A+ID Y+KCG +  A   F   +N  D  +  +N +I  Y+ +GL   
Sbjct: 482 RNNVRVEDFIGTALIDMYSKCGRLDYAEKVF---YNIKDPCLATWNAIISGYSLYGLEHT 538

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A   + K++   L+P + TF+ V++AC+H GLV  G   F  M  +YG+ PS   Y C+V
Sbjct: 539 AFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIV 598

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
            +L + G  ++A   I  M  QP   V+ +LL+ C I    +LGE  ++KL LL  KN  
Sbjct: 599 ALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGG 658

Query: 755 AHVLLS 760
            +VL+S
Sbjct: 659 FYVLMS 664



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 216/474 (45%), Gaps = 30/474 (6%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +HG  +K GF  D  L N L++MY+KC        +FDEM E+++VSW  ++    Q
Sbjct: 176 GRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQ 235

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG FD  +  + +M   GF P+   + +++       A+ F  ++HC+ +K     +  V
Sbjct: 236 NGLFDKAILYFKEMLKEGFHPSSVTIMNLVS------ANAFPENVHCYVVKCGFTNDASV 289

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++  YAK G    A++++    + D+    A+I  Y+  G    A+      +   I
Sbjct: 290 VTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDI 349

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D    I  L G +  + F IG   HG  ++S +     + N LI +Y +   ++ A  
Sbjct: 350 KPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALS 409

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F  M +K +I+WN++  G  +         LF +  + G +P+ +T + LL  C +L +
Sbjct: 410 LFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGN 469

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G  L    L      E+ + ++LI M+ +CG ++ A  VF N+    + TWN ++SG
Sbjct: 470 LRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISG 529

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y     +      +  + E G++ +  TF  V+  C            HG ++  G    
Sbjct: 530 YSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAAC-----------THGGLVYLGLEYF 578

Query: 483 GYICSS--LIKSYVNF----------GQLDNSFEFSNGAE-RLDMASWGAMMSA 523
             +     L+ S  ++          G    + EF N  E + D A WGA+++A
Sbjct: 579 NIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNA 632



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 145/618 (23%), Positives = 265/618 (42%), Gaps = 50/618 (8%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+    +K G    I +  +LI +Y K G+      +FD+M+ R++VSW +++    QNG
Sbjct: 77  QIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNG 136

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                ++++VDM    F PN+  + S++  C        G SIH F +K     +  +  
Sbjct: 137 YLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN 196

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK  D+ A++ +F  +    V  WN MIG Y   G   +A+     ML EG   
Sbjct: 197 ALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHP 256

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
              T +N      LV+       +H  +++       S+V +L+ +Y K    + A +++
Sbjct: 257 SSVTIMN------LVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLY 310

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           +    KD+I+   +   +SE  +       F + I    +P+ V    +L          
Sbjct: 311 KYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFA 370

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G       +  G  ++  V + LI ++ R   +E A S+F ++  K + TWN ++SG  
Sbjct: 371 IGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCV 430

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
                +D ++ F  +   G + +  T   ++  CC+  N ++   +H  I++       +
Sbjct: 431 QAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF 490

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           I ++LI  Y   G+LD + +     +   +A+W A++S     G  H A   +  L E G
Sbjct: 491 IGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQG 550

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG---FN--TEVYVASAVIDAYAKCGD 599
            KPD+     +L +C            H  ++ LG   FN  T+ Y     +  YA    
Sbjct: 551 LKPDKITFLGVLAACT-----------HGGLVYLGLEYFNIMTKEYGLMPSLQHYA---- 595

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
                                 ++      GL  EA+E  +KM+   +QP  A + ++++
Sbjct: 596 ---------------------CIVALLGKEGLFKEAIEFINKME---IQPDSAVWGALLN 631

Query: 660 ACSHKGLVDKGCLLFKSM 677
           AC  +  V  G  L K +
Sbjct: 632 ACCIQREVKLGECLAKKL 649



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 148/312 (47%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F   S+++   + +      VH ++VK GFTND  +  +L+ +Y+K G+     +++   
Sbjct: 254 FHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYY 313

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             ++L++ T I+S+  + G+ +  ++ ++        P+  A+  V+    +      G 
Sbjct: 314 PTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGC 373

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           + H + +K  +  +  V   +++ Y++  ++ AA  +FY +    +  WN+MI G    G
Sbjct: 374 TFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAG 433

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
              +A+ + S M   G   D  T  + L GC  + +  IG  +H  I+R+ V     I  
Sbjct: 434 KSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGT 493

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ALIDMY K   +DYA KVF  + D  + +WN +  G+S           + K    G +P
Sbjct: 494 ALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKP 553

Query: 346 NHVTFSILLRQC 357
           + +TF  +L  C
Sbjct: 554 DKITFLGVLAAC 565



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 113/218 (51%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   L    N     +G   HG+ VK G +ND  + N LI++YS+       L
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F +M E+ L++W  ++S  +Q G+    ++++ +M   G  P+   + S++  C  +G
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLG 468

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G ++H + L+  +    F+G ++++ Y+K G +  AE+VFY+I    +  WNA+I 
Sbjct: 469 NLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIIS 528

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           GY+  G    A    S +  +G+  DK TF+  L  C+
Sbjct: 529 GYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT 566



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 53/124 (42%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D I +A  LS    L +  +G  +H +I++     + F+   LI MYSKCG   +  +
Sbjct: 451 KPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEK 510

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF  + +  L +W  I+S     G        Y  ++  G  P++     V+  C   G 
Sbjct: 511 VFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGL 570

Query: 161 SEFG 164
              G
Sbjct: 571 VYLG 574


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 182/616 (29%), Positives = 307/616 (49%), Gaps = 22/616 (3%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           A+   +K   ++  +    +IH  AL+  +    +P V  ++L  YA+ G +AAA  VF 
Sbjct: 59  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 118

Query: 205 SIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS----L 258
           SIS  + D   +N++I           AL  + +ML  G  +  +T ++ L+  S     
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 259 VADFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADK--DVIS 314
            A   +GR+ H   +++ +         NAL+ MY +   +  A ++F        DV++
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WNT+     ++    +     +  +  G RP+ VTF+  L  C +L  LD+G ++    +
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 375 HCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTWNELLSGYCFNCCDAD 431
               L   + V S+L+ M+     V  A  VFD V  S K +  WN ++ GY     D +
Sbjct: 299 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 358

Query: 432 VLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
            L+ F  +  E+G      T   V+  C RSE       +HG ++K G +   ++ ++L+
Sbjct: 359 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 418

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI---FHSLVEAGEKP 547
             Y   G+ D +       +  D+ SW  +++  V QGH  +A  +      L E G  P
Sbjct: 419 DMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 478

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +   L T+L  CA + A  R K IH + ++   +T+V V SA++D YAKCG +  +R  F
Sbjct: 479 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 538

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGL 666
           D+     + I +N LIMAY  HGL  EA  +FD+M  +   +P++ TF++ ++ACSH G+
Sbjct: 539 DR-LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 597

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRSL 725
           VD+G  LF +M+  +G++P+PD   C+VD+L R G L++A  ++  M   +   + + ++
Sbjct: 598 VDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTM 657

Query: 726 LSGCRIHGNKELGEWA 741
           L  CR+H N  LGE A
Sbjct: 658 LGACRLHRNVHLGEIA 673



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 15/477 (3%)

Query: 62  LGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIV 117
           LG + H   +K G  +    F  N L++MY++ G      R+F        ++V+W  +V
Sbjct: 184 LGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 243

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRI 176
           S  +Q+G FD  ++   DM   G  P+     S +  C  +   + G  +H + +K   +
Sbjct: 244 SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 303

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             N FV  ++++ YA    V  A +VF  +  S   +G WNAMI GYA  G   EAL + 
Sbjct: 304 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 363

Query: 235 SSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           + M  E G    + T  + L  C+    F     +HG +++  +  +  + NAL+DMY +
Sbjct: 364 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 423

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTASLFHKFILSGSRPNHVTF 350
               D A ++F  +   DV+SWNTL  G        +  Q A    +    G  PN +T 
Sbjct: 424 LGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 483

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             LL  C  L     G ++   A+      +  V S+L+ M+ +CG + ++ +VFD +  
Sbjct: 484 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPR 543

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQ 469
           +N  TWN L+  Y  +    +    F  +  SG    N  TF   +  C  S       Q
Sbjct: 544 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 603

Query: 470 IHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE--RLDMASWGAMMSA 523
           +  A+ +  G      I + ++      G+LD ++      E     +++W  M+ A
Sbjct: 604 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 660



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 193/396 (48%), Gaps = 12/396 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D +  A +L     L+   +G ++H +++K      + F+ + L+ MY+     G  
Sbjct: 267 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 326

Query: 99  LRVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVC 155
            +VFD + +  + L  W  ++    Q G  +  L+++  M+   GF+P E  + SV+  C
Sbjct: 327 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 386

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
               A     ++H + +K  +  N FV  ++++ YA+LG    A R+F  +   DV  WN
Sbjct: 387 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 446

Query: 216 AMIGG---YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            +I G     H    F+    +  +   G+  +  T +  L GC+++A    G++IHG  
Sbjct: 447 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 506

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +R  ++  +++ +AL+DMY K   +  +  VF+R+  ++ I+WN L   +  +   G+  
Sbjct: 507 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 566

Query: 333 SLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
            LF +   SG +RPN VTF   L  C     +D GLQL   +    G     ++ + ++ 
Sbjct: 567 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVD 626

Query: 391 MFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYC 424
           +  R G ++ A+++  ++    + ++ W+ +L G C
Sbjct: 627 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTML-GAC 661


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 182/743 (24%), Positives = 341/743 (45%), Gaps = 20/743 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L L   L++   G +VH HI +     + F+ N+L+ MY+  G  G   R+FD +   N+
Sbjct: 70  LQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHNV 129

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           +S+T I+ A +  G+ D  LK+    +   F  +   +   ++          G   H  
Sbjct: 130 LSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDT 189

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAA----ERVFYSISSDDVGCWNAMIGG-YAHCG 225
             +   + +  V  S++  Y+  G++ AA    +R F    S DV  W  ++     H  
Sbjct: 190 IRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRD 249

Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
           Y   AL++   M  +G+  D+  F+  L     + D   G++IH +++  E+E    +  
Sbjct: 250 Y-IGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGT 308

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           A++ MY +   +  A + F+R+    V +W  L G +    +      +  +    G +P
Sbjct: 309 AVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKP 368

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLA--LHCGFLDEE-NVTSSLIYMFCRCGAVEMAH 402
           N VTF  +L  C K L L+ G ++Q LA       LD    + +++I MF R  ++ +A 
Sbjct: 369 NEVTFITILDTC-KNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAR 427

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
             FD +S K++  +  +++GY  N    + L  F  +    V  +       +  C    
Sbjct: 428 EAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIP 487

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           + +    +H + +  G      + ++L+  Y   G ++++       ER D  +W AM++
Sbjct: 488 DLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIA 547

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT-KSIHPFVIKLGFN 581
           AL   G    AV +   + + G +P    +  +L +CA  G  +   + +H  ++  GF+
Sbjct: 548 ALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFD 607

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG---LVSEAMEI 638
           ++  V  AV+  YAK G I+ A  AFD+  N  DV  + T++ AY   G       A+++
Sbjct: 608 SDPEVKFAVMRMYAKVGSIQEACNAFDKIENP-DVKAWTTMLEAYCRLGKYNASDRALKL 666

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
              M+   + P + TFV +++AC++ G + +    FK M   YG+ P  + Y  LVD ++
Sbjct: 667 ARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVA 726

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL----LLLPKNDA 754
           R GYL++A+ +I ++P Q +  ++ +LL  C+   +    +   E ++     L P    
Sbjct: 727 RKGYLQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDPLGTG 786

Query: 755 AHVLLSK-RKRQREGNLLDHEGV 776
           AH + ++  + +R   L+   G+
Sbjct: 787 AHRVAARWEEAKRVRKLMTDRGI 809



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/576 (23%), Positives = 264/576 (45%), Gaps = 13/576 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + DP  LA ++  +   +   LG   H  I + G+  D  +  +LI MYS CG     +
Sbjct: 160 FKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAV 219

Query: 100 RVFDEMAER----NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           + FD    R    ++VSWT I++A  ++ ++   L ++  M+  G +P+     +V+   
Sbjct: 220 QAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSV 279

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
           + +G    G  IH   L   +E++  VG +V+  YA++G +  A R F  I    V  W 
Sbjct: 280 IGLGDIAQGKRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWT 339

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
            ++G Y   G     + ++  M  EG+  ++ TFI  L  C  +A  + G++I  L    
Sbjct: 340 VLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNLA-LEDGKKIQALASEQ 398

Query: 276 E---VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +   ++ S  I  A+I M+ + S M  A + F++++ K V ++  +  G++ NK P +  
Sbjct: 399 QQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREAL 458

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
           ++F + I      +++  ++ +  C  + DL+ G  L C A+  G   ++ V ++L+ M+
Sbjct: 459 AIFQEMIRRRVAADNLVLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMY 518

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
            RCG++E A +VF  +   +   W+ +++    +      +     + + G   +G T  
Sbjct: 519 SRCGSMEDASAVFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMV 578

Query: 453 YVVETCCRSEN-QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
            V+  C  +   ++   ++H  ++  GF S   +  ++++ Y   G +  +    +  E 
Sbjct: 579 GVLAACAHAGMIEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIEN 638

Query: 512 LDMASWGAMMSALVHQGH---NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
            D+ +W  M+ A    G    +  A+ +   + + G  PD+     IL +CA  G  Q  
Sbjct: 639 PDVKAWTTMLEAYCRLGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEA 698

Query: 569 -KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
            +         G   E+    A++D  A+ G ++ A
Sbjct: 699 GRYFKDMKFDYGLVPEMEHYVALVDTVARKGYLQEA 734



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 135/606 (22%), Positives = 275/606 (45%), Gaps = 16/606 (2%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V+++C  + A   G  +H    + R+E   FVG  ++  YA  G+   A R+F  + S +
Sbjct: 69  VLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGLGSHN 128

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  + A++  Y   G   EAL ++     +    D      A++   +  D  +GR  H 
Sbjct: 129 VLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHD 188

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE----RMADKDVISWNTLFGGFSENK 326
            I R   +    +  +LI MY     ++ A + F+    R    DV+SW  +    +E++
Sbjct: 189 TIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHR 248

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +      LF +    G  P+ + F  +L     L D+  G ++  + L      +  V +
Sbjct: 249 DYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDRELERDSMVGT 308

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
           +++ M+ R G+++ A   FD +    +  W  L+  YC       V++    +   GV+ 
Sbjct: 309 AVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKP 368

Query: 447 NGCTFFYVVETC--CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
           N  TF  +++TC     E+ + +  +     +    +   I +++I  +  F  +  + E
Sbjct: 369 NEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILARE 428

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +   +  +A++ AM++   +     EA+ IF  ++      D  +L   +++CA+I  
Sbjct: 429 AFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISACASIPD 488

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +  K++H   + LG + +  V +A++D Y++CG ++ A   F +     D + ++ +I 
Sbjct: 489 LEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGE-IERPDTVAWSAMIA 547

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           A   HG    A+ +  +M+    +PS AT V V++AC+H G++++      S+    G  
Sbjct: 548 ALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFD 607

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG-CRIHGNKELGEW-AS 742
             P+    ++ M ++ G +++A +  + +   P    + ++L   CR      LG++ AS
Sbjct: 608 SDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR------LGKYNAS 660

Query: 743 EKLLLL 748
           ++ L L
Sbjct: 661 DRALKL 666



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/504 (22%), Positives = 217/504 (43%), Gaps = 17/504 (3%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           E   +D Y  +  LQ C+ +     G ++H  I RS +E    + N L+ MY        
Sbjct: 59  EPFDVDSYQHV--LQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGE 116

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A ++F+ +   +V+S+  +   +    +P +   + H   L   + +    ++ +   G 
Sbjct: 117 ARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGM 176

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK----NITT 415
             DL LG         CG+  +  V  SLI M+  CG +E A   FD    +    ++ +
Sbjct: 177 KRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVS 236

Query: 416 WNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           W ++L+  C    D    L  F  + E GV  +   F  V+++     +     +IH  +
Sbjct: 237 WTKILAA-CNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMV 295

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +         + ++++K Y   G + ++    +  ++  +A+W  ++ A    G  +  +
Sbjct: 296 LDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVM 355

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCA--AIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
            I   +   G KP+E    TIL++C   A+   ++ +++     +   +    + +AVI 
Sbjct: 356 QILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVIG 415

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            +++   +  AR AFD+  +   V  Y  +I  YA++    EA+ IF +M    +     
Sbjct: 416 MFSRFSSMILAREAFDK-ISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNL 474

Query: 653 TFVSVMSACSHKGLVDKGCLLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI- 710
                +SAC+    +++G  L   +MD   G+         LVDM SR G +EDA  V  
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMD--LGLHRDDVVRTALVDMYSRCGSMEDASAVFG 532

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGN 734
           EI   +P    + ++++    HG+
Sbjct: 533 EIE--RPDTVAWSAMIAALGRHGD 554


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 182/616 (29%), Positives = 307/616 (49%), Gaps = 22/616 (3%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           A+   +K   ++  +    +IH  AL+  +    +P V  ++L  YA+ G +AAA  VF 
Sbjct: 61  ALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFG 120

Query: 205 SIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS----L 258
           SIS  + D   +N++I           AL  + +ML  G  +  +T ++ L+  S     
Sbjct: 121 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 180

Query: 259 VADFDIGRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADK--DVIS 314
            A   +GR+ H   +++ +         NAL+ MY +   +  A ++F        DV++
Sbjct: 181 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 240

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WNT+     ++    +     +  +  G RP+ VTF+  L  C +L  LD+G ++    +
Sbjct: 241 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 300

Query: 375 HCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNV--SYKNITTWNELLSGYCFNCCDAD 431
               L   + V S+L+ M+     V  A  VFD V  S K +  WN ++ GY     D +
Sbjct: 301 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 360

Query: 432 VLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
            L+ F  +  E+G      T   V+  C RSE       +HG ++K G +   ++ ++L+
Sbjct: 361 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 420

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI---FHSLVEAGEKP 547
             Y   G+ D +       +  D+ SW  +++  V QGH  +A  +      L E G  P
Sbjct: 421 DMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 480

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +   L T+L  CA + A  R K IH + ++   +T+V V SA++D YAKCG +  +R  F
Sbjct: 481 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 540

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA-NLQPSQATFVSVMSACSHKGL 666
           D+     + I +N LIMAY  HGL  EA  +FD+M  +   +P++ TF++ ++ACSH G+
Sbjct: 541 DR-LPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 599

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRSL 725
           VD+G  LF +M+  +G++P+PD   C+VD+L R G L++A  ++  M   +   + + ++
Sbjct: 600 VDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTM 659

Query: 726 LSGCRIHGNKELGEWA 741
           L  CR+H N  LGE A
Sbjct: 660 LGACRLHRNVHLGEIA 675



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 209/477 (43%), Gaps = 15/477 (3%)

Query: 62  LGTQVHGHIVKLGFTN--DIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIV 117
           LG + H   +K G  +    F  N L++MY++ G      R+F        ++V+W  +V
Sbjct: 186 LGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMV 245

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IRI 176
           S  +Q+G FD  ++   DM   G  P+     S +  C  +   + G  +H + +K   +
Sbjct: 246 SVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDEL 305

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             N FV  ++++ YA    V  A +VF  +  S   +G WNAMI GYA  G   EAL + 
Sbjct: 306 AANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLF 365

Query: 235 SSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           + M  E G    + T  + L  C+    F     +HG +++  +  +  + NAL+DMY +
Sbjct: 366 ARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYAR 425

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTASLFHKFILSGSRPNHVTF 350
               D A ++F  +   DV+SWNTL  G        +  Q A    +    G  PN +T 
Sbjct: 426 LGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 485

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             LL  C  L     G ++   A+      +  V S+L+ M+ +CG + ++ +VFD +  
Sbjct: 486 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPR 545

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQ 469
           +N  TWN L+  Y  +    +    F  +  SG    N  TF   +  C  S       Q
Sbjct: 546 RNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQ 605

Query: 470 IHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE--RLDMASWGAMMSA 523
           +  A+ +  G      I + ++      G+LD ++      E     +++W  M+ A
Sbjct: 606 LFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGA 662



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/396 (25%), Positives = 193/396 (48%), Gaps = 12/396 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D +  A +L     L+   +G ++H +++K      + F+ + L+ MY+     G  
Sbjct: 269 VRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKA 328

Query: 99  LRVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVC 155
            +VFD + +  + L  W  ++    Q G  +  L+++  M+   GF+P E  + SV+  C
Sbjct: 329 RQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPAC 388

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
               A     ++H + +K  +  N FV  ++++ YA+LG    A R+F  +   DV  WN
Sbjct: 389 ARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWN 448

Query: 216 AMIGG---YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
            +I G     H    F+    +  +   G+  +  T +  L GC+++A    G++IHG  
Sbjct: 449 TLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYA 508

Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
           +R  ++  +++ +AL+DMY K   +  +  VF+R+  ++ I+WN L   +  +   G+  
Sbjct: 509 VRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEAT 568

Query: 333 SLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIY 390
            LF +   SG +RPN VTF   L  C     +D GLQL   +    G     ++ + ++ 
Sbjct: 569 VLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVD 628

Query: 391 MFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYC 424
           +  R G ++ A+++  ++    + ++ W+ +L G C
Sbjct: 629 ILGRAGRLDEAYAMVTSMETGEQQVSAWSTML-GAC 663


>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 293/588 (49%), Gaps = 6/588 (1%)

Query: 177 EKNPFVGCSVLN-FYAKLGDVAA--AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           ++N F+  S  + +Y  + +  A   E V +    D+V  W + I           A+ +
Sbjct: 17  QRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVGL 76

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
              ML      +  T ++ ++  S +   D+ R I G +I+   E  +S+  ALI  Y  
Sbjct: 77  FKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFY-S 135

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              M   +K+F +   KD++ W+ +     ++   G+   +F      G  PNHV+   +
Sbjct: 136 DYDMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSI 195

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  +  L  G ++   ++   F    NV +SL+ M+ +C   + +  VFD +  K++
Sbjct: 196 LPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDL 255

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            +W  ++ G   N C  +  K F  +  S    +      ++    +++  +     HG 
Sbjct: 256 ISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGF 315

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
           ++K G  +   I ++L++ Y  FG+L+++    +   + D  SW AM+S   H  H + A
Sbjct: 316 LLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNA 375

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           +  F  +    E+P+E    ++L +C+ IGA +  +SI     K G+ +  +++SA+ID 
Sbjct: 376 LETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDL 435

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           Y K G I   R  F++   + D++ ++++I  Y  +G   EA+E F  M    ++P++  
Sbjct: 436 YCKFGRINQGRAIFNE-IPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVV 494

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F+SV+SACSH GL  +G   F SM+ +YG+ P    Y C+VD++SR G +E A   +  M
Sbjct: 495 FISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 554

Query: 714 PFQPSPTVYRSLLSGCR-IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P +P   ++ +LL+GCR  HG+ E+ E  +E+L+ L P+N + +V+LS
Sbjct: 555 PMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILS 602



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 226/464 (48%), Gaps = 15/464 (3%)

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           G ++KLGF +++ +   LI  YS     G   ++F++   ++LV W+ +VSA +++G++ 
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
              +++  M+ +G  PN  ++ S++  C ++GA  FG  IH F++K        V  S++
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           + YAK  +  A+  VF  I   D+  W  +I G        EA    S M F     D+ 
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADET 291

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
              + +       +   G   HG ++++ +   +SI  AL+ MY K   ++ A  VF+++
Sbjct: 292 IVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQL 351

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             KD ISW+ +    + +++P      F +   +  RPN +TF  LL+ C  +   +LG 
Sbjct: 352 NKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGE 411

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +Q  A   G+L    ++S+LI ++C+ G +    ++F+ +  K++  W+ +++GY  N 
Sbjct: 412 SIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNG 471

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETC--CRSENQ-----QMVGQIHGAIIKTGFS 480
           C  + L+TF N+   GV+ N   F  V+  C  C  E++       + Q +G I K    
Sbjct: 472 CGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHY 531

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           +C      ++      G ++ + +F N      D   WGA+++ 
Sbjct: 532 AC------MVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAG 569



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/590 (21%), Positives = 270/590 (45%), Gaps = 12/590 (2%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-----RNLVSWTLIVSAAIQNGEFDMGLK 131
            ++F++N+  ++Y +  +  +    ++E  E      N++SWT  +S+ ++  + ++ + 
Sbjct: 18  RNVFIRNSAYSLYYRSMFNTYAY--YEEPVEFHGEKDNVISWTSKISSLVKQNQSELAVG 75

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           ++  M      PN   V SV++    +G  +    I    +K+  E    V  +++ FY+
Sbjct: 76  LFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYS 135

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
              D+    ++F      D+  W+AM+      G   EA  +  +M ++G+  +  + ++
Sbjct: 136 DY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVS 194

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  C+ V     G++IHG  I+       ++ N+L+DMY K      +  VF+++ +KD
Sbjct: 195 ILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKD 254

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           +ISW T+  G  EN  P +    F +   S    +      L+    +  +   G+    
Sbjct: 255 LISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHG 314

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             L  G L   ++ ++L+ M+ + G +E A  VFD ++ K+  +W+ ++S +  +    +
Sbjct: 315 FLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYN 374

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+TF  +  +    N  TF  +++ C     Q++   I     K G+ S  ++ S+LI 
Sbjct: 375 ALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALID 434

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y  FG+++      N     D+  W +M++     G   EA+  F +++  G KP+E +
Sbjct: 435 LYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVV 494

Query: 552 LGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
             ++L++C+  G      S       K G   ++   + ++D  ++ G+I+GA    ++ 
Sbjct: 495 FISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKM 554

Query: 611 FNSNDVIVYNTLIMA-YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
               D  ++  L+    + HG +  A  + +  +L  L P   ++  ++S
Sbjct: 555 PMEPDKRIWGALLAGCRSTHGSIEIAELVAE--RLIGLDPQNTSYYVILS 602



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 150/302 (49%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N+ + + G ++HG  +K  F     + N+L+ MY+KC  F   + VFD++ E++L+SWT 
Sbjct: 201 NVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTT 260

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I+   I+N       K +  M+ + F  +E  V  ++   +     +FG + H F LK  
Sbjct: 261 IIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNG 320

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +     +G ++L  YAK G++ +A  VF  ++  D   W+AMI  +AH  + + AL    
Sbjct: 321 LLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFK 380

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M       ++ TF++ LQ CSL+   ++G  I     ++    +  + +ALID+Y K  
Sbjct: 381 QMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFG 440

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++    +F  +  KD++ W+++  G+  N    +    F   +  G +PN V F  +L 
Sbjct: 441 RINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLS 500

Query: 356 QC 357
            C
Sbjct: 501 AC 502



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 13/300 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G   HG ++K G    + +   L+ MY+K G     + VFD++ +++ +SW+ ++S   
Sbjct: 308 FGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHA 367

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +      L+ +  M++    PNE    S+++ C  +GA E G SI   A K     N F
Sbjct: 368 HSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAF 427

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G +     +F  I + D+ CW++MI GY   G G EAL   S+ML  G
Sbjct: 428 LSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACG 487

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL------IDMYIKSS 295
           +  ++  FI+ L  CS       G +  G    S +E    I+  L      +D+  +  
Sbjct: 488 VKPNEVVFISVLSACS-----HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRG 542

Query: 296 GMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            ++ A +   +M  + D   W  L  G        + A L  + ++ G  P + ++ ++L
Sbjct: 543 NIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLI-GLDPQNTSYYVIL 601



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R + I     L     + ++ LG  +  H  K G+ ++ FL + LI +Y K G    G  
Sbjct: 388 RPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRA 447

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F+E+  ++LV W+ +++    NG  D  L+ + +M   G  PNE    SV+  C   G 
Sbjct: 448 IFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGL 507

Query: 161 SEFGYSIHCFALKIR----IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWN 215
              G+S  CF+   +    I K P   C V +  ++ G++  A +    +  + D   W 
Sbjct: 508 EHEGWS--CFSSMEQKYGIIPKLPHYACMV-DLISRRGNIEGALQFVNKMPMEPDKRIWG 564

Query: 216 AMIGG 220
           A++ G
Sbjct: 565 ALLAG 569


>gi|147853495|emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
          Length = 954

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 174/659 (26%), Positives = 309/659 (46%), Gaps = 46/659 (6%)

Query: 76  TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           T  IFL NNLI++Y   G       VF EM +RN+VS+  I+    +NG  +    ++ +
Sbjct: 85  TQPIFLYNNLISLYVLQGELSTAREVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSE 144

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLG 194
           ++  GF P +     ++  C S+  S+ G+ +    +K  +   +P+ G ++L+ + + G
Sbjct: 145 LRRYGFEPTQHTFAGLLS-CASLKLSQ-GFQLQAQMVKSGLFHADPYAGTALLSLFRRNG 202

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +      F  +   ++  WN +I  + + G+  E++ +   ++  G  + + +F+  L 
Sbjct: 203 CIDEVVCAFEEMPLKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLS 262

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           G +   D ++G Q+H L+I++  +  +S++N+LI+MY+K S +  A K+FE    +DV+S
Sbjct: 263 GFASEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVS 322

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WNT+ G  ++++ P +   LF K  L G  PN  TF  ++  C  L  L  G  +    +
Sbjct: 323 WNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVI 382

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC-CDADVL 433
                    V S+L+  + +C  +E AH  FD +  KN+  WN L+ GY   C     +L
Sbjct: 383 RNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCFSSVSLL 442

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           K    + + G   N  +F   +++    E QQ+    H  I++ G+    Y+ S+LI SY
Sbjct: 443 K---RMLQLGYXPNEXSFSAALKSSLVFELQQL----HCLIMRMGYQQNEYVSSALITSY 495

Query: 494 VNFGQLDNSFEFSNGA--------------------------------ERLDMASWGAMM 521
              G + ++  F   +                                E  D+ SW  ++
Sbjct: 496 AKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLFSLLEEPDIVSWNILI 555

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
           +A    G   E   +F  +  A   PD Y + ++L+ C  +       SIH F+IK  F 
Sbjct: 556 AACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFK 615

Query: 582 -TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
             + +V + +ID Y KCG I+ +   F++    N +I +  LI A   +G  +EA+++F 
Sbjct: 616 FCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRN-IITWTALISALGVNGYANEALKLFR 674

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           +M+    +P     V+V SAC H GL+     L +  +      P P C+    DM+ R
Sbjct: 675 EMESLGFKPDGVALVAVFSACRHGGLIFLAGRLPEHTNFGGPCGPRPTCFQSR-DMIPR 732



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/532 (25%), Positives = 244/532 (45%), Gaps = 42/532 (7%)

Query: 63  GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+   +VK G F  D +    L++++ + G     +  F+EM  +NLV+W  ++S   
Sbjct: 171 GFQLQAQMVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVISLFG 230

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             G  +  + ++ ++   G   +E +   V+    S    E G  +H   +K   +    
Sbjct: 231 NYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDXEVS 290

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S++N Y K   +  AE++F      DV  WN MIG  A      + L +   M  +G
Sbjct: 291 VLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDG 350

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  ++ TF++ +  C+ +     G  IH  +IR+++E ++ + +AL+D Y K   ++ A 
Sbjct: 351 VLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAH 410

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
             F+ + +K+V+ WN L  G+S NK    + SL  + +  G  PN  +FS  L+     L
Sbjct: 411 CCFDEIDEKNVVCWNALILGYS-NKC-FSSVSLLKRMLQLGYXPNEXSFSAALKSS---L 465

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK---------- 411
             +L  QL CL +  G+   E V+S+LI  + + G +  A  +FD  S K          
Sbjct: 466 VFELQ-QLHCLIMRMGYQQNEYVSSALITSYAKNGIISDA-LIFDAASNKPLLVGPSNAI 523

Query: 412 -----------------------NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
                                  +I +WN L++    N    +V + F ++  + +  + 
Sbjct: 524 AGVYNKIGQYHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDN 583

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC-GYICSSLIKSYVNFGQLDNSFEFSN 507
            T   ++  C +  N  +   IHG IIKT F  C  ++ + LI  Y   G +++S +  N
Sbjct: 584 YTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFN 643

Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
                ++ +W A++SAL   G+ +EA+ +F  +   G KPD   L  + ++C
Sbjct: 644 KIIXRNIITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSAC 695



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 206/431 (47%), Gaps = 41/431 (9%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVH  ++K GF  ++ + N+LI MY KC       ++F+    R++VSW  ++ A  
Sbjct: 272 LGEQVHDLLIKNGFDXEVSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALA 331

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++      L++++ M  +G +PNE    SV+  C ++    FG  IH   ++ +IE N F
Sbjct: 332 KSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVF 391

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH-CGYGFEALNVVSSMLFE 240
           VG ++++FYAK  ++ +A   F  I   +V CWNA+I GY++ C   F +++++  ML  
Sbjct: 392 VGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKC---FSSVSLLKRMLQL 448

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   ++ +F  AL+  SLV +    +Q+H LI+R   + +  + +ALI  Y K+  +  A
Sbjct: 449 GYXPNEXSFSAALKS-SLVFEL---QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDA 504

Query: 301 F--------------------------------KVFERMADKDVISWNTLFGGFSENKNP 328
                                             +F  + + D++SWN L    + N + 
Sbjct: 505 LIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLFSLLEEPDIVSWNILIAACARNGDY 564

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSS 387
            +   LF    ++   P++ T   LL  C KL +L LG  +    +   F   +  V + 
Sbjct: 565 KEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNV 624

Query: 388 LIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVN 447
           LI M+ +CG +E +  +F+ +  +NI TW  L+S    N    + LK F  +   G + +
Sbjct: 625 LIDMYGKCGCIESSLKIFNKIIXRNIITWTALISALGVNGYANEALKLFREMESLGFKPD 684

Query: 448 GCTFFYVVETC 458
           G     V   C
Sbjct: 685 GVALVAVFSAC 695



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/335 (22%), Positives = 144/335 (42%), Gaps = 39/335 (11%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NL+  V G  +H  +++    +++F+ + L+  Y+KC         FDE+ E+N+V W  
Sbjct: 367 NLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNA 426

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++     N  F   + +   M   G+ PNE +  + +K  +     +    +HC  +++ 
Sbjct: 427 LI-LGYSNKCFS-SVSLLKRMLQLGYXPNEXSFSAALKSSLVFELQQ----LHCLIMRMG 480

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAA--------------------------------ERVF 203
            ++N +V  +++  YAK G ++ A                                + +F
Sbjct: 481 YQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHXTQDLF 540

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   D+  WN +I   A  G   E   +   M    I  D YT ++ L  C+ + +  
Sbjct: 541 SLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLA 600

Query: 264 IGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           +G  IHG II+++ + C   + N LIDMY K   ++ + K+F ++  +++I+W  L    
Sbjct: 601 LGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRNIITWTALISAL 660

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             N    +   LF +    G +P+ V    +   C
Sbjct: 661 GVNGYANEALKLFREMESLGFKPDGVALVAVFSAC 695



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
           LS+   L +  LG+ +HG I+K  F   D F+ N LI MY KCG     L++F+++  RN
Sbjct: 590 LSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRN 649

Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           +++WT ++SA   NG  +  LK++ +M++ GF P+  A+ +V   C
Sbjct: 650 IITWTALISALGVNGYANEALKLFREMESLGFKPDGVALVAVFSAC 695


>gi|413937111|gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 183/713 (25%), Positives = 331/713 (46%), Gaps = 33/713 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           +R D    + +L     + S  LG Q+HG + KLG+   D+F+ N L+ MYS C      
Sbjct: 111 VRPDAFVFSVALRACAAVGSLRLGRQLHGAVAKLGYVGVDLFVANGLVTMYSSCQSLPCA 170

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VF  +A  +LVSWT ++SA  +NG     L ++++M   G   + F +   ++   S+
Sbjct: 171 EKVFGSIASPDLVSWTSMLSAYTENGRDAEALVLFMEMARGGVACDAFTLSVALRAASSL 230

Query: 159 G--ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           G      G+ +HC  +K+ +    F+   ++ FY + G++     VF  ++  D+  WN 
Sbjct: 231 GHVGVGLGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNT 290

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           +I  YA      EA     +M+FE    D++T  + LQ  +    F  G +IHG +IR+ 
Sbjct: 291 VIQCYAENLCHEEASAHFRAMMFEFAECDEFTLGSILQVVTRTGAFGHGMEIHGYLIRAG 350

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
           ++    +++AL+DMY+  + +    +V      K  +   T+ G   +            
Sbjct: 351 LDSDKHVMSALMDMYVNWASLGKTHRVIPLRMLKYYL---TIQGKLDQ------------ 395

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            FI++ S          L+ C   LDL  G  L    L      +  VTSSL+ M+ +CG
Sbjct: 396 -FIVASS----------LKSCASGLDLLAGRMLHACILKSDMNPDSFVTSSLLDMYAKCG 444

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A+E ++ +F          W+  +SG C N      ++ F  +    V+ N  T+  ++ 
Sbjct: 445 ALEESNLLFSRTKNPGTAEWSAAISGNCLNGQYGRAVQLFRRMQSEHVQPNEFTYTAILT 504

Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
            C    +     +IH   I+ G+ +   +  SLI  Y+  G+   + +        D+ S
Sbjct: 505 ACMALGDTASGVEIHSNSIRNGYGTNASVLKSLIAFYLRQGRYHQALKLCLALSNRDV-S 563

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
           WG ++ +L    H+   V + H +   G   D +    IL+SC  +G  +     H ++ 
Sbjct: 564 WGTLVESLSQVDHHVGIVNLLHVIQRCGANLDCHTARLILSSCGKLGLLEEGLQAHAYMT 623

Query: 577 KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAM 636
           K G  +     S +ID Y+  G ++ A  AF+    + D   + +++ A   +G    A+
Sbjct: 624 KRGLASSACTNSYLIDMYSSVGSLRHASDAFNY-MPAKDASSWASIVAANVENGCPETAI 682

Query: 637 EIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            +F +M+    +P+   F+SV+ AC+  GLV +    F SM   Y +QPS + Y  ++ +
Sbjct: 683 RLFSQME-EKCRPTPEAFLSVLKACARTGLVSEAFRFFVSMTEVYKIQPSEEHYSHMIQV 741

Query: 697 LSRNGYLEDAKHVIE-IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
           LSR G  ++A+H I+ ++P +   + +  L +  + +GN +  + A ++L  L
Sbjct: 742 LSRAGMFKEAEHFIDSVVPSESGTSAWSLLSAAAQQNGNDKTVKLAGDRLARL 794



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 233/503 (46%), Gaps = 33/503 (6%)

Query: 190 YAKLGDVAAAERVFYSIS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           +A+ G +  A  VF ++      +  W  ++ GYA  G   EAL ++  ML   +  D +
Sbjct: 57  HARAGRMQPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEALELLLCMLGLLVRPDAF 116

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            F  AL+ C+ V    +GRQ+HG + +   V   + + N L+ MY     +  A KVF  
Sbjct: 117 VFSVALRACAAVGSLRLGRQLHGAVAKLGYVGVDLFVANGLVTMYSSCQSLPCAEKVFGS 176

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL--LDLD 364
           +A  D++SW ++   ++EN    +   LF +    G   +  T S+ LR    L  + + 
Sbjct: 177 IASPDLVSWTSMLSAYTENGRDAEALVLFMEMARGGVACDAFTLSVALRAASSLGHVGVG 236

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG QL C  +  G + +E + + LI  + R G +++  +VFD ++ K++ +WN ++  Y 
Sbjct: 237 LGHQLHCCMIKMGLVGKEFLDNCLIGFYGRSGELQLMRNVFDEMNGKDLVSWNTVIQCYA 296

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N C  +    F  +     E +  T   +++   R+       +IHG +I+ G  S  +
Sbjct: 297 ENLCHEEASAHFRAMMFEFAECDEFTLGSILQVVTRTGAFGHGMEIHGYLIRAGLDSDKH 356

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + S+L+  YVN+  L  +                          H    + +    +   
Sbjct: 357 VMSALMDMYVNWASLGKT--------------------------HRVIPLRMLKYYLTIQ 390

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
            K D++I+ + L SCA+       + +H  ++K   N + +V S+++D YAKCG ++ + 
Sbjct: 391 GKLDQFIVASSLKSCASGLDLLAGRMLHACILKSDMNPDSFVTSSLLDMYAKCGALEESN 450

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
           + F ++ N      ++  I     +G    A+++F +M+  ++QP++ T+ ++++AC   
Sbjct: 451 LLFSRTKNPGTA-EWSAAISGNCLNGQYGRAVQLFRRMQSEHVQPNEFTYTAILTACMAL 509

Query: 665 GLVDKGCLLFK-SMDSQYGMQPS 686
           G    G  +   S+ + YG   S
Sbjct: 510 GDTASGVEIHSNSIRNGYGTNAS 532



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 13/207 (6%)

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           + +W  +MS     G   EA+ +   ++    +PD ++    L +CAA+G+ +  + +H 
Sbjct: 80  LVAWTTLMSGYATHGPASEALELLLCMLGLLVRPDAFVFSVALRACAAVGSLRLGRQLHG 139

Query: 574 FVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
            V KLG+   +++VA+ ++  Y+ C  +  A   F  S  S D++ + +++ AY  +G  
Sbjct: 140 AVAKLGYVGVDLFVANGLVTMYSSCQSLPCAEKVFG-SIASPDLVSWTSMLSAYTENGRD 198

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG------CLLFKSMDSQYGMQPS 686
           +EA+ +F +M    +     T    + A S  G V  G      C + K      G+   
Sbjct: 199 AEALVLFMEMARGGVACDAFTLSVALRAASSLGHVGVGLGHQLHCCMIK-----MGLVGK 253

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
                CL+    R+G L+  ++V + M
Sbjct: 254 EFLDNCLIGFYGRSGELQLMRNVFDEM 280


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 150/498 (30%), Positives = 255/498 (51%), Gaps = 34/498 (6%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G+ YA  VFE + + +++ WNT+F G + + +P     L+   I  G  PN  TF  LL+
Sbjct: 12  GLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLK 71

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY----- 410
            C KL     GLQ+    L  G+  +  V +SLI M+ +   +E AH VFD  S+     
Sbjct: 72  SCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131

Query: 411 --------------------------KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
                                     K++ +WN ++SGY       + L+ F  + ++ V
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   V+    RS + ++  Q+H  I   GF S   I ++LI  Y   G+++ +  
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G    D+ SW  ++    H     EA+ +F  ++ +GE P++  + +IL++CA +GA
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311

Query: 565 YQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
               + IH ++ K   G      + +++ID Y+KCGDI+ A   F+   + + +  +N +
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKS-LPAWNAM 370

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  +A HG  + A +IF +M+   ++P   TFV ++SACSH G++D G  +F+SM   Y 
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYK 430

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           + P  + YGC++D+L  +G  ++A+ +I  M  +P   ++ SLL  C++HGN ELGE  +
Sbjct: 431 ITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFA 490

Query: 743 EKLLLLLPKNDAAHVLLS 760
           + L  + P N  ++VLLS
Sbjct: 491 QNLFKIEPNNPGSYVLLS 508



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 219/500 (43%), Gaps = 66/500 (13%)

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           + + VF+ + E NL+ W  +      + +    LK+YV M + G +PN +    ++K C 
Sbjct: 15  YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY-------------------------- 190
            + AS+ G  IH   LK+  E + +V  S+++ Y                          
Sbjct: 75  KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTA 134

Query: 191 -----AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
                A  G + +A  +F  I   DV  WNAMI GY   G   EAL +   M+   +  D
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPD 194

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T +  +   +     ++GRQ+H  I       ++ IVNALID Y K   M+ A  +F 
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            ++ KDVISWN L GG++      +   LF + + SG  PN VT   +L  C  L  +D+
Sbjct: 255 GLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDI 314

Query: 366 GLQLQCL--ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           G  +         G  +  ++ +SLI M+ +CG +E AH VF+++ +K++  WN ++ G+
Sbjct: 315 GRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGF 374

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +         F  + ++ ++ +  TF  ++  C            H  ++  G     
Sbjct: 375 AMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACS-----------HAGMLDLG----R 419

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           +I  S+  +Y    +L++               +G M+  L H G   EA  +  ++   
Sbjct: 420 HIFRSMTHNYKITPKLEH---------------YGCMIDLLGHSGLFKEAEEMISTMT-- 462

Query: 544 GEKPDEYILGTILNSCAAIG 563
             +PD  I  ++L +C   G
Sbjct: 463 -MEPDGVIWCSLLKACKMHG 481



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 169/357 (47%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMY---------------- 89
           FL KS +    LK+   G Q+HGH++KLG+  D+++  +LI+MY                
Sbjct: 68  FLLKSCA---KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRS 124

Query: 90  ---------------SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                          +  GY      +FDE+  +++VSW  ++S  ++ G +   L+++ 
Sbjct: 125 SHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFK 184

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + +V+      G+ E G  +H +        N  +  ++++FY+K G
Sbjct: 185 EMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCG 244

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           ++  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G + +  T ++ L 
Sbjct: 245 EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILH 304

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    V  + S+  +LIDMY K   ++ A +VF  M  K +
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            +WN +  GF+ +        +F +   +  +P+ +TF  LL  C     LDLG  +
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHI 421



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 144/642 (22%), Positives = 256/642 (39%), Gaps = 88/642 (13%)

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
           VF +I   ++  WN M  G+A       AL +   M+  G+  + YTF   L+ C+ +  
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD------------ 309
              G QIHG +++   E  + +  +LI MY+++  ++ A KVF+R +             
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 310 -------------------KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
                              KDV+SWN +  G+ E  N  +   LF + + +  RP+  T 
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             ++    +   ++LG Q+       GF     + ++LI  + +CG +E A  +F  +SY
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           K++ +WN L+ GY       + L  F  +  SG   N  T   ++  C       +   I
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318

Query: 471 HGAIIK--TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
           H  I K   G ++   + +SLI  Y   G ++ + +  N      + +W AM+      G
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
             + A  IF  + +   KPD+     +L++C+  G     + I   +      T  Y  +
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSM------THNYKIT 432

Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
             ++ Y    D+ G                         H GL  EA E+   M    ++
Sbjct: 433 PKLEHYGCMIDLLG-------------------------HSGLFKEAEEMISTM---TME 464

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAK 707
           P    + S++ AC   G V+ G    K   + + ++P +P  Y  L ++ +  G   +  
Sbjct: 465 PDGVIWCSLLKACKMHGNVELG---EKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVA 521

Query: 708 HVIEIMP---FQPSP--------TVYRSLLSGCRIHG-NKELGEWASEKLLLLLPKN--- 752
            +  ++     +  P        +V    + G + H  N+E+     E  +LL       
Sbjct: 522 RIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVP 581

Query: 753 DAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLELKL 794
           D + VL    +  +EG L  H     +  G+  +  K E KL
Sbjct: 582 DTSEVLQEMEEEFKEGALRHHSEKLAIAFGL--ISTKPETKL 621



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   +S S    S  LG QVH  I   GF +++ + N LI  YSKCG      
Sbjct: 191 VRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETAC 250

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  ++ ++++SW +++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 251 GLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLG 310

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +     +  S+++ Y+K GD+ AA +VF S+    +  WNAM
Sbjct: 311 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAM 370

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           I G+A  G    A ++ S M    I  D  TF+  L  CS     D+GR I
Sbjct: 371 IFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHI 421


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/565 (28%), Positives = 282/565 (49%), Gaps = 21/565 (3%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML +G T+    ++  L  C         R +HG ++++     + +  +L+++Y++ + 
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
              A ++F+ M DK+V++W  L  G + N  P     +F + +  G  P+H T   +L  
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C     +DLG Q+   ++  G     ++ +SL  ++C+ G +E     F     KN+ TW
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITW 246

Query: 417 NELLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
             ++S    +    D+ L  F ++ E GV  N  T   V+  C    +  +  Q+     
Sbjct: 247 TTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCY 306

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH--------- 526
           K G  +   + +S +  Y+  G+ D +       +   + +W AM+S             
Sbjct: 307 KVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDL 366

Query: 527 --QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
             +    +A+ +F  LV +  KPD +   +IL+ C+A+ A ++ + IH   IK G  ++V
Sbjct: 367 HARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDV 426

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            V SA+++ Y KCG I+ A  AF +   +   + + ++I  Y+ HG   +A+++F+ M L
Sbjct: 427 VVNSALVNMYNKCGSIECATKAFVE-MPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVL 485

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
           +  +P++ TFVS++SACS+ GLV++    F  M ++Y ++P  D YGC+VDM  R G L+
Sbjct: 486 SGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLD 545

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--- 761
           DA   I+   F+P+  ++ SL++GCR HGN EL  +A+++LL L PK    +VLL     
Sbjct: 546 DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMYI 605

Query: 762 -----RKRQREGNLLDHEGVCNVND 781
                R   R   L  HE V  + D
Sbjct: 606 STGRWRDVARVRKLAKHEDVGVLRD 630



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 240/523 (45%), Gaps = 31/523 (5%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HGH+VK G   D+F+  +L+ +Y +C       R+FD M ++N+V+WT +++    N E
Sbjct: 98  LHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSE 157

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             + L+++V+M   G  P+ + +G ++  C +    + G  +H +++K   +    +G S
Sbjct: 158 PALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNS 217

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-GYGFEALNVVSSMLFEGITM 244
           +   Y K GD+ +  R F      +V  W  MI   A    Y    L++   ML  G+  
Sbjct: 218 LCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMP 277

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  + +  C    D  +G+Q+     +   E ++ + N+ + +Y++    D A ++F
Sbjct: 278 NEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLF 337

Query: 305 ERMADKDVISWNTLFGGFSENKNPG-----------QTASLFHKFILSGSRPNHVTFSIL 353
           E M    +I+WN +  G+++  +             Q   LF   + S  +P+  TFS +
Sbjct: 338 EEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSI 397

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  ++ L+ G Q+    +  G L +  V S+L+ M+ +CG++E A   F  +  +  
Sbjct: 398 LSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTP 457

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW  ++SGY  +    D ++ F ++  SG   N  TF  ++  C         G +  A
Sbjct: 458 VTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSAC------SYAGLVEEA 511

Query: 474 IIKTGFSSCGYICSSLIKSY-------VNFGQLDNSFEF--SNGAERLDMASWGAMMSAL 524
                     Y    L+  Y       V  G+LD++F F    G E  + A W ++++  
Sbjct: 512 ERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEP-NEAIWSSLVAGC 570

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDE-YILGTILNSCAAIGAYQ 566
              G+   A      L+E   K  E Y+L  +LN   + G ++
Sbjct: 571 RSHGNMELAFYAADRLLELKPKVIETYVL--LLNMYISTGRWR 611



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 184/377 (48%), Gaps = 18/377 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG+ +K G      + N+L  +Y K G    GLR F    ++N+++WT ++S+  
Sbjct: 195 LGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCA 254

Query: 122 QNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++  + D+GL +++DM   G MPNEF + SVM +C +      G  +  F  K+  E N 
Sbjct: 255 EDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANL 314

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFE 229
            V  S +  Y + G+   A R+F  + S  +  WNAMI GYA               GF+
Sbjct: 315 PVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQ 374

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +   ++   +  D +TF + L  CS +   + G QIH   I++     + + +AL++
Sbjct: 375 ALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVN 434

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ A K F  M  +  ++W ++  G+S++        LF   +LSG+RPN +T
Sbjct: 435 MYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEIT 494

Query: 350 FSILLRQC---GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
           F  LL  C   G + + +    +     H   L +      ++ MF R G ++ A S   
Sbjct: 495 FVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDH--YGCMVDMFVRLGRLDDAFSFIK 552

Query: 407 NVSYK-NITTWNELLSG 422
              ++ N   W+ L++G
Sbjct: 553 RTGFEPNEAIWSSLVAG 569



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 247/569 (43%), Gaps = 42/569 (7%)

Query: 111 VSWTLIVSAAIQNG--EFDMGLKMYVDMKTNGFMPNEFAVGSVMKV-----CVSMGASEF 163
            S+    + A++NG  E +   +     +  G + +   V S M V     CV  G    
Sbjct: 35  TSYQRSSAQALENGRLEHESPPRPLDAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGA 94

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
             ++H   +K     + FV  S++N Y +      A R+F  +   +V  W A+I G+  
Sbjct: 95  ARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITGHTL 154

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 AL V   ML  G     YT    L  CS     D+G+Q+HG  I+   +   S+
Sbjct: 155 NSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSM 214

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSG 342
            N+L  +Y KS  ++   + F+   DK+VI+W T+    +E++N      SLF   +  G
Sbjct: 215 GNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGG 274

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             PN  T + ++  CG  LD+ LG Q+Q      G      V +S +Y++ R G  + A 
Sbjct: 275 VMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAM 334

Query: 403 SVFDNVSYKNITTWNELLSGYC--FNCCDADV---------LKTFCNIWESGVEVNGCTF 451
            +F+ +   +I TWN ++SGY    +    D+         LK F ++  S ++ +  TF
Sbjct: 335 RLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTF 394

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             ++  C      +   QIH   IKTG  S   + S+L+  Y   G ++ + +       
Sbjct: 395 SSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPT 454

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS- 570
               +W +M+S     G + +A+ +F  +V +G +P+E    ++L++C+  G  +  +  
Sbjct: 455 RTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERY 514

Query: 571 ---------IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS-FNSNDVIVYN 620
                    I P V   G          ++D + + G +  A     ++ F  N+ I ++
Sbjct: 515 FDMMRNEYHIEPLVDHYG---------CMVDMFVRLGRLDDAFSFIKRTGFEPNEAI-WS 564

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +L+     HG +  A    D  +L  L+P
Sbjct: 565 SLVAGCRSHGNMELAFYAAD--RLLELKP 591



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 63/125 (50%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S L+ D    +  LS+   + +   G Q+H + +K G  +D+ + + L+ MY+KCG    
Sbjct: 385 SELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIEC 444

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R  V+WT ++S   Q+G     ++++ DM  +G  PNE    S++  C  
Sbjct: 445 ATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSY 504

Query: 158 MGASE 162
            G  E
Sbjct: 505 AGLVE 509


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 185/703 (26%), Positives = 311/703 (44%), Gaps = 64/703 (9%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  I K GF  +  L + LI +Y   G     +++FD++   N+  W  ++S  +   
Sbjct: 31  KLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKK 90

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNPFV 182
                L ++  M T    P+E    SV++ C S G + F  +  IH   +      +P V
Sbjct: 91  LASQVLGLFSLMITENVTPDESTFASVLRAC-SGGKAPFQVTEQIHAKIIHHGFGSSPLV 149

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
              +++ Y+K G V  A+ VF  +   D   W AMI G +  G   EA+ +   M    +
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAV 209

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
               Y F + L  C+ +  F +G Q+HG I++  +     + NAL+ +Y +   +  A +
Sbjct: 210 IPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQ 269

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F +M  +D IS+N+L  G ++     +   LF K  L   +P+ VT + LL  C  +  
Sbjct: 270 IFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGA 329

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G QL    +  G   +  +  SL+ ++ +C  +E AH  F     +N+  WN +L  
Sbjct: 330 GYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVA 389

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y      ++    F  +   G+  N  T+  ++ TC       +  QIH  +IK+GF   
Sbjct: 390 YGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFN 449

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+CS LI  Y   G+LD +          D+ SW AM++         EA+ +F  +  
Sbjct: 450 VYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMEN 509

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA-----VIDAYAKC 597
            G + D     + +++CA I A  + + IH      G++ ++ + +A     +I  Y+KC
Sbjct: 510 QGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKC 569

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G I+ A+  F +    N V+ +N +I  Y+ HG  SEA+ +F++MK   L P+  TFV  
Sbjct: 570 GSIEDAKREFFEMPEKN-VVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGE 628

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           M                            PD                             
Sbjct: 629 MPI-------------------------EPDA---------------------------- 635

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
              ++R+LLS C +H N E+GE+A+  LL L P++ A +VLLS
Sbjct: 636 --MIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLS 676



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 245/473 (51%), Gaps = 3/473 (0%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
            GI  +  T++   +GC         +++H  I +S  +    + + LID+Y+    +D 
Sbjct: 4   RGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDN 63

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC-G 358
           A K+F+ +   +V  WN +  G    K   Q   LF   I     P+  TF+ +LR C G
Sbjct: 64  AIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSG 123

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
                 +  Q+    +H GF     V + LI ++ + G V++A  VF+ +  K+  +W  
Sbjct: 124 GKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVA 183

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           ++SG   N  + + +  FC + +S V      F  V+  C + E  ++  Q+HG I+K G
Sbjct: 184 MISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG 243

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            SS  ++C++L+  Y  +G L  + +  +   R D  S+ +++S L  +G +  A+ +F 
Sbjct: 244 LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFE 303

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +     KPD   + ++L++CA++GA  + K +H +VIK+G ++++ +  +++D Y KC 
Sbjct: 304 KMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF 363

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
           DI+ A   F  +   N V+++N +++AY   G +SE+  IF +M++  L P+Q T+ S++
Sbjct: 364 DIETAHEYFLTTETEN-VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSIL 422

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             C+  G +D G  +   +  + G Q +      L+DM +++G L+ A+ +++
Sbjct: 423 RTCTSLGALDLGEQIHTQV-IKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 217/413 (52%), Gaps = 5/413 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P   +  LS    ++   LG Q+HG IVK G +++ F+ N L+ +YS+ G      ++F 
Sbjct: 213 PYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS 272

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +M  R+ +S+  ++S   Q G  D  L+++  M+ +   P+   V S++  C S+GA   
Sbjct: 273 KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H + +K+ +  +  +  S+L+ Y K  D+  A   F +  +++V  WN M+  Y  
Sbjct: 333 GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQ 392

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   E+  +   M  EG+  ++YT+ + L+ C+ +   D+G QIH  +I+S  + ++ +
Sbjct: 393 LGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYV 452

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            + LIDMY K   +D A  + +R+ ++DV+SW  +  G++++    +   LF +    G 
Sbjct: 453 CSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGI 512

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV-----TSSLIYMFCRCGAV 398
           R +++ FS  +  C  +  L+ G Q+   +   G+ ++ ++     ++ LI ++ +CG++
Sbjct: 513 RSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSI 572

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
           E A   F  +  KN+ +WN +++GY  +   ++ +  F  + + G+  N  TF
Sbjct: 573 EDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTF 625



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 161/316 (50%), Gaps = 5/316 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + +A  LS   ++ +   G Q+H +++K+G ++D+ ++ +L+ +Y KC       
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             F      N+V W +++ A  Q G       +++ M+  G MPN++   S+++ C S+G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           A + G  IH   +K   + N +V   +++ YAK G++  A  +   +  +DV  W AMI 
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       EAL +   M  +GI  D   F +A+  C+ +   + G+QIH     S    
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549

Query: 280 SISIVNA-----LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
            +SI NA     LI +Y K   ++ A + F  M +K+V+SWN +  G+S++    +  SL
Sbjct: 550 DLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 609

Query: 335 FHKFILSGSRPNHVTF 350
           F +    G  PNHVTF
Sbjct: 610 FEEMKQLGLMPNHVTF 625



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 150/318 (47%), Gaps = 4/318 (1%)

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           E G+  N  T+ ++ E C  S +     ++H  I K+GF     + S LI  Y+  G++D
Sbjct: 3   ERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVD 62

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           N+ +  +     +++ W  ++S L+ +    + + +F  ++     PDE    ++L +C+
Sbjct: 63  NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122

Query: 561 AIGA-YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
              A +Q T+ IH  +I  GF +   V + +ID Y+K G +  A++ F++ F   D + +
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLF-LKDSVSW 181

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
             +I   + +G   EA+ +F +M  + + P+   F SV+SAC+   L   G  L   +  
Sbjct: 182 VAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI-V 240

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
           ++G+         LV + SR G L  A+ +   M  +     Y SL+SG    G  +   
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRGFSDRAL 299

Query: 740 WASEKLLLLLPKNDAAHV 757
              EK+ L   K D   V
Sbjct: 300 QLFEKMQLDCMKPDCVTV 317


>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 659

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 151/593 (25%), Positives = 286/593 (48%), Gaps = 34/593 (5%)

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
           C A  I + + P      +    ++ +  AA  +F  +   D+  W A+I GY      F
Sbjct: 15  CTAASISLLEKP------VEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSF 68

Query: 229 EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           EALN+ S++LF+  ++ D      AL+ C   ++   G  +H    ++ +  S+ +   L
Sbjct: 69  EALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNL 128

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           ++MY+++  +D   ++F  M  ++ ++W  +  G  E     +  + F +   S    + 
Sbjct: 129 LNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDD 188

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
             F+  L+ C +L  +  G ++    +  G      V +SLI M+  CG +     +F++
Sbjct: 189 FAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFES 248

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
           +S +++ +W  L+  Y     +   + TF  I E     +  T+F + ++          
Sbjct: 249 MSERDVFSWTTLIDAYSQMGQEEKAVATFLKI-EIFRRTSQWTYFCLGDSLS-------- 299

Query: 468 GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ 527
                            + +S++K Y   G+LD++     G  R D+ +W  ++      
Sbjct: 300 -----------------VSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYSQA 342

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           G   E    F  + +AG KP +  L ++L+    +   ++ + +H   + LG      + 
Sbjct: 343 GLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNSTIR 402

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA+I+ Y+KCG I+ A   F+++ +++D++    +I  YA HG   EA+++F+K     L
Sbjct: 403 SALINMYSKCGSIEEASKIFEET-DTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVGL 461

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +P   TF+SV++ACSH G +D G   F  M  +Y ++P  + YGC+VD+L R G L DA+
Sbjct: 462 RPDTVTFISVLTACSHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAE 521

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +I  MP++    V+ +LL+ C+  G+ E G  A+E++L L P ++ A V L+
Sbjct: 522 KMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTSETAFVTLA 574



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 127/546 (23%), Positives = 231/546 (42%), Gaps = 70/546 (12%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H +  K      +F+  NL+ MY + G    G R+F EM  RN V+WT IVS  ++
Sbjct: 106 GESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVE 165

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G    GL  + +M  +  + ++FA  + +K C  +   ++G  IH   +    + +  V
Sbjct: 166 AGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCV 225

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S++N Y + G++     +F S+S  DV  W  +I  Y+  G   +A+           
Sbjct: 226 VNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVAT--------- 276

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
               +  I   +  S    F +G              S+S+ N+++ MY     +D A  
Sbjct: 277 ----FLKIEIFRRTSQWTYFCLGD-------------SLSVSNSMMKMYSTCGKLDSASV 319

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M  +D+I+W+T+ GG+S+     +    F     +G +P     + LL   G +  
Sbjct: 320 LFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAV 379

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+  LAL+ G      + S+LI M+ +CG++E A  +F+     +I +   +++G
Sbjct: 380 LEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIVSLTAMING 439

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + +  F    + G+  +  TF  V+  C  S                     
Sbjct: 440 YAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHS--------------------- 478

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAE-----RLDMASWGAMMSALVHQGHNHEAVTIF 537
                         GQLD  F + N  +     R     +G M+  L   G   +A  + 
Sbjct: 479 --------------GQLDLGFRYFNLMQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMI 524

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
           +   E   K D+ +  T+LN+C A G  +R +     +++L   +E    + + + Y+  
Sbjct: 525 N---EMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTSETAFVT-LANIYSST 580

Query: 598 GDIKGA 603
           G ++ A
Sbjct: 581 GKLEEA 586



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/597 (22%), Positives = 252/597 (42%), Gaps = 49/597 (8%)

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV-MKV 154
           G    +FD+M  R++VSWT I++  +        L ++  +  +  +  + +V SV +K 
Sbjct: 37  GAARHLFDQMPHRDIVSWTAIINGYVTAANSFEALNLFSALLFDPAVSPDTSVLSVALKA 96

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C       +G S+H +A K  +  + FVG ++LN Y + G +    R+F  +   +   W
Sbjct: 97  CGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQFRNTVTW 156

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            A++ G    G   E L   S M       D + F  AL+ C+ +     G++IH  +I 
Sbjct: 157 TAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHVIV 216

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
              + S+ +VN+LI+MY +   M     +FE M+++DV SW TL   +S+     +  + 
Sbjct: 217 RGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVAT 276

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F K               + R+  +     LG             D  +V++S++ M+  
Sbjct: 277 FLKI-------------EIFRRTSQWTYFCLG-------------DSLSVSNSMMKMYST 310

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
           CG ++ A  +F  +  ++I TW+ ++ GY       +V   F  + ++G +        +
Sbjct: 311 CGKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASL 370

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +         +   Q+H   +  G      I S+LI  Y   G ++ + +     +  D+
Sbjct: 371 LSVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDI 430

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY--------- 565
            S  AM++     G+  EA+ +F   ++ G +PD     ++L +C+  G           
Sbjct: 431 VSLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNL 490

Query: 566 -QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            Q   +I P     G          ++D   + G +  A    ++     D +V+ TL+ 
Sbjct: 491 MQDEYNIRPVKEHYG---------CMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLN 541

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQP-SQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           A    G         +  ++  L P S+  FV++ +  S  G +++   + K+M S+
Sbjct: 542 ACKAKGDTERGRRAAE--RILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSK 596



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 177/395 (44%), Gaps = 43/395 (10%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A +L     L+    G ++H H++  G    + + N+LI MY++CG    G+ +F
Sbjct: 187 DDFAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLF 246

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M+ER++ SWT ++ A  Q G+                   E AV + +K+ +    S+
Sbjct: 247 ESMSERDVFSWTTLIDAYSQMGQ------------------EEKAVATFLKIEIFRRTSQ 288

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           + Y   C    + +        S++  Y+  G + +A  +F  +   D+  W+ +IGGY+
Sbjct: 289 WTY--FCLGDSLSVSN------SMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGGYS 340

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G G E     S M   G         + L     +A  + GRQ+H L +   +E + +
Sbjct: 341 QAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQNST 400

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           I +ALI+MY K   ++ A K+FE     D++S   +  G++E+ N  +   LF K +  G
Sbjct: 401 IRSALINMYSKCGSIEEASKIFEETDTDDIVSLTAMINGYAEHGNTKEAIDLFEKSLKVG 460

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS------LIYMFCRCG 396
            RP+ VTF  +L  C     LDLG +   L       DE N+         ++ + CR G
Sbjct: 461 LRPDTVTFISVLTACSHSGQLDLGFRYFNL-----MQDEYNIRPVKEHYGCMVDLLCRAG 515

Query: 397 AVEMAHSVFDNVSY-KNITTWNELLSGYCFNCCDA 430
            +  A  + + + + K+   W  LL     N C A
Sbjct: 516 RLSDAEKMINEMPWKKDDVVWTTLL-----NACKA 545



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/468 (20%), Positives = 197/468 (42%), Gaps = 30/468 (6%)

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
           G I R     SIS++   ++  ++ S    A  +F++M  +D++SW  +  G+    N  
Sbjct: 9   GTIQRFCTAASISLLEKPVEKIVRISNQGAARHLFDQMPHRDIVSWTAIINGYVTAANSF 68

Query: 330 QTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
           +  +LF   +   +  P+    S+ L+ CG+  ++  G  L   A     L    V ++L
Sbjct: 69  EALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNL 128

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + M+ R G ++    +F  + ++N  TW  ++SG        + L  F  +  S    + 
Sbjct: 129 LNMYMRTGKIDKGCRIFTEMQFRNTVTWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDD 188

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
             F   ++ C R    +   +IH  +I  G  +   + +SLI  Y   G++ +       
Sbjct: 189 FAFATALKACARLRQVKYGKEIHTHVIVRGSDASLCVVNSLINMYTECGEMHDGVHLFES 248

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D+ SW  ++ A    G   +AV  F                        I  ++RT
Sbjct: 249 MSERDVFSWTTLIDAYSQMGQEEKAVATF----------------------LKIEIFRRT 286

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
                F +       + V+++++  Y+ CG +  A + F Q     D+I ++T+I  Y+ 
Sbjct: 287 SQWTYFCL----GDSLSVSNSMMKMYSTCGKLDSASVLF-QGMRRRDIITWSTIIGGYSQ 341

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
            GL  E    F  M+ A  +P+     S++S      ++++G  +  ++    G++ +  
Sbjct: 342 AGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQV-HALALYLGLEQNST 400

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
               L++M S+ G +E+A  + E        ++  ++++G   HGN +
Sbjct: 401 IRSALINMYSKCGSIEEASKIFEETDTDDIVSL-TAMINGYAEHGNTK 447


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 146/509 (28%), Positives = 277/509 (54%), Gaps = 5/509 (0%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  C+ +  F  G  +H   +++ +   I + N +I++Y K   + +A ++F+ M+D+++
Sbjct: 10  LHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNL 69

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           +SW+ +  G+ +   P    +LF +  +    PN   F+ ++  C  L  L  GLQ+   
Sbjct: 70  VSWSAIISGYDQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVHAQ 126

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           +L  G +    V+++LI M+ +CG    A  V + +S  N  ++N L++G+  N      
Sbjct: 127 SLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKG 186

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           ++ F  + + G   +  TF  ++  C   ++     Q+H  +IK       +I + +I  
Sbjct: 187 IEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITM 246

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG-EKPDEYI 551
           Y  F  ++ + +     +  D+ SW  +++A      +  A+ +F  +++    KPD++ 
Sbjct: 247 YSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFT 306

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
              +L +CA + + +  K IH  +I+     +V V++A+++ YAKCG IK +   F ++ 
Sbjct: 307 FAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTS 366

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           + N ++ +NT+I A+ +HGL + A+E F+KMK   + P   TFV +++AC+H GLV++G 
Sbjct: 367 DRN-LVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQ 425

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           + F SM+  YG+ P+ + + CL+D+L R G L++A+  +E +PF   P +  SLLS CR+
Sbjct: 426 VYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRL 485

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           HG+  +GE  + +LL L P   + +VLLS
Sbjct: 486 HGDMVIGEHLATQLLKLQPVTTSPYVLLS 514



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 208/403 (51%), Gaps = 4/403 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           +K+ + G  +H   +K G  +DI + N++I +YSKCG   +  R+FDEM++RNLVSW+ I
Sbjct: 16  IKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAI 75

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S   Q G+  + L ++  M+    +PNE+   SV+  C S+ A   G  +H  +LK+  
Sbjct: 76  ISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGC 132

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
               FV  ++++ Y K G    A  V   +S  +   +NA+I G+       + +     
Sbjct: 133 VSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKV 192

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  +G   D++TF   L  C+   DF  G Q+H  +I+  +E S  I N +I MY K + 
Sbjct: 193 MRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNL 252

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLR 355
           ++ A KVF  + +KD+ISWNTL       K+  +   +F   + +   +P+  TF+ +L 
Sbjct: 253 IEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLA 312

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L  +  G Q+    +      +  V+++L+ M+ +CG+++ ++ VF   S +N+ +
Sbjct: 313 ACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVS 372

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           WN +++ +  +   A  L+ F  +   G+  +  TF  ++  C
Sbjct: 373 WNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTAC 415



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 236/510 (46%), Gaps = 17/510 (3%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
           A+GS++  C  + A   G S+H  ALK  +  +  V   V+N Y+K G+V  A R+F  +
Sbjct: 5   AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
           S  ++  W+A+I GY   G    ALN+ S M    I  ++Y F + +  C+ +     G 
Sbjct: 65  SDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGL 121

Query: 267 QIHGLIIRSEVEC-SISIV-NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           Q+H   ++  + C S+S V NALI MY+K      A  V   M++ + +S+N L  GF E
Sbjct: 122 QVHAQSLK--LGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVE 179

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N+ P +    F      G  P+  TFS LL  C    D   G+QL C  +     D   +
Sbjct: 180 NQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFI 239

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD-VLKTFCNIWESG 443
            + +I M+ +   +E A  VF  +  K++ +WN L++  CF C D +  L+ F ++ +  
Sbjct: 240 GNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCF-CKDHERALRVFRDMLDVC 298

Query: 444 -VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
            V+ +  TF  V+  C    + +   QIHG +I+T       + ++L+  Y   G + NS
Sbjct: 299 FVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNS 358

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
           ++        ++ SW  +++A  + G    A+  F  +   G  PD      +L +C   
Sbjct: 359 YDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHA 418

Query: 563 GAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           G  +  +   +      G    +   S +ID   + G ++ A    ++    +D I+  +
Sbjct: 419 GLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGS 478

Query: 622 LIMAYAHHG--LVSEAMEIFDKMKLANLQP 649
           L+ A   HG  ++ E +      +L  LQP
Sbjct: 479 LLSACRLHGDMVIGEHL----ATQLLKLQP 504



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 27/380 (7%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N F     +  + +F A  +S   +L +   G QVH   +KLG  +  F+ N LI+MY K
Sbjct: 90  NLFSQMRIVPNEYVF-ASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMK 148

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           CG     L V + M+E N VS+  +++  ++N + + G++ +  M+  GF P+ F    +
Sbjct: 149 CGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGL 208

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           + +C S      G  +HC  +K+ +E + F+G  ++  Y+K   +  AE+VF  I   D+
Sbjct: 209 LGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDL 268

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
             WN ++     C     AL V   ML    +  D +TF   L  C+ +A    G+QIHG
Sbjct: 269 ISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHG 328

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +IR+     + + NAL++MY K   +  ++ VF R +D++++SWNT+   F  +    +
Sbjct: 329 HLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGAR 388

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F K    G  P+ VTF  LL  C                 H G ++E  V  +   
Sbjct: 389 ALEHFEKMKTVGIHPDSVTFVGLLTACN----------------HAGLVEEGQVYFN--- 429

Query: 391 MFCRCGAVEMAHSVFDNVSY 410
                 ++E A+ +F N+ +
Sbjct: 430 ------SMEEAYGIFPNIEH 443


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 169/649 (26%), Positives = 318/649 (48%), Gaps = 4/649 (0%)

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           S+  +VS     G     L+ Y+ M+      + +   S+ K C ++     G S+H   
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           +   +  + ++G S+++FYAK G +    +VF ++   +V  W  +IG Y+  G    A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++   M   GI     T ++ L G   ++   +   +H LII    E  +++ N++++MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
            K   +  A ++F+ +  +D++SWN+L   +S+     +   L     +   +P+  TF 
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
             L       DL LG  +  L L  G   +++V S+L+ ++ RC  ++ A+ VF + + K
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++  W  ++SG   N C    L  F  + ES V+ +  T    +  C +     +   IH
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G +++ G        +SL+  Y    +L  S    N     D+ SW A+++     G+  
Sbjct: 373 GYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLS 432

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           + +  F+ + ++  +PD   + ++L +C + GA  + K IH FV++      +   +A++
Sbjct: 433 KGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALV 492

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D Y KCG+++ A+  FD      D++ ++TLI+ Y  +G    A+  + +     ++P+ 
Sbjct: 493 DMYFKCGNLENAQKCFDCMLQ-RDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNH 551

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             F+SV+SACSH GL+ KG  +++SM   + M P+ +   C+VD+LSR G +++A    +
Sbjct: 552 VIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYK 611

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +M  +PS  V   LL  CR++G  ELG+  +  +  L P +    V L+
Sbjct: 612 MMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/573 (23%), Positives = 280/573 (48%), Gaps = 8/573 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +V  G ++D ++ ++LI+ Y+K G    G +VFD M +RN+V WT I+ +  +
Sbjct: 68  GLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSR 127

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR--IEKNP 180
            G+ D+   M+  M+ +G  P    + S++      G S+    +    L I    E + 
Sbjct: 128 EGDIDIAFSMFKQMRESGIQPTSVTLLSLLP-----GISKLPLLLCLHCLIILHGFESDL 182

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S++N Y K G +A A R+F SI   D+  WN+++  Y+  G   E L ++ +M  E
Sbjct: 183 ALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIE 242

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            I  DK TF +AL   ++  D  +G+ +HGL+++  +     + +AL+ +Y++   +D A
Sbjct: 243 DIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPA 302

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           +KVF+   +KDV+ W  +  G  +N    +   +F++ I S  +P+  T +  L  C +L
Sbjct: 303 YKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQL 362

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
              D+G  +    L  G + +    +SL+ M+ +C  ++ + S+F+ +  K++ +WN ++
Sbjct: 363 GCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIV 422

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +G+  N   +  +  F  + +S +  +  T   +++ C  +        IH  ++++   
Sbjct: 423 AGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLI 482

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
            C    ++L+  Y   G L+N+ +  +   + D+ +W  ++      G    A+  +   
Sbjct: 483 PCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEF 542

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGD 599
           +  G +P+  I  ++L++C+  G   +  SI+  + K    +  +   + V+D  ++ G 
Sbjct: 543 LGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGK 602

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
           +  A   +   F    ++V   L+ A   +G V
Sbjct: 603 VDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRV 635



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 218/498 (43%), Gaps = 33/498 (6%)

Query: 74  GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
           GF +D+ L N+++ MY KCG      R+F  +  R++VSW  ++SA  + G  +  L++ 
Sbjct: 177 GFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLL 236

Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
             MK     P++    S +      G    G  +H   LK  +  +  V  +++  Y + 
Sbjct: 237 QAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRC 296

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
             +  A +VF S +  DV  W AMI G        +AL V   M+   +     T  + L
Sbjct: 297 RCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGL 356

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C+ +   DIG  IHG ++R  +   I   N+L+ MY K + +  +  +F +M +KD++
Sbjct: 357 AACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLV 416

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           SWN +  G ++N    +    F++   S  RP+ +T + LL+ CG    L  G  +    
Sbjct: 417 SWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFV 476

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           L    +      ++L+ M+ +CG +E A   FD +  +++  W+ L+ GY FN      L
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + +     +G+E N   F  V+  C            HG +I  G S    I  S+ K +
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACS-----------HGGLISKGLS----IYESMTKDF 581

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
                L++                  ++  L   G   EA + +  +    ++P   +LG
Sbjct: 582 RMSPNLEHR---------------ACVVDLLSRAGKVDEAYSFYKMMF---KEPSIVVLG 623

Query: 554 TILNSCAAIGAYQRTKSI 571
            +L++C   G  +  K I
Sbjct: 624 MLLDACRVNGRVELGKVI 641



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 172/372 (46%), Gaps = 11/372 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D      +LS S       LG  VHG ++K G   D  +++ L+ +Y +C       
Sbjct: 244 IKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAY 303

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF    E+++V WT ++S  +QN   D  L ++  M  +   P+   + S +  C  +G
Sbjct: 304 KVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLG 363

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G SIH + L+  I  +     S++  YAK   +  +  +F  +   D+  WNA++ 
Sbjct: 364 CCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVA 423

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G+A  GY  + +   + M    +  D  T  + LQ C        G+ IH  ++RS +  
Sbjct: 424 GHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIP 483

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            I    AL+DMY K   ++ A K F+ M  +D+++W+TL  G+  N         + +F+
Sbjct: 484 CIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFL 543

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------ 393
            +G  PNHV F  +L  C        GL  + L+++     +  ++ +L +  C      
Sbjct: 544 GTGMEPNHVIFISVLSACSH-----GGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLS 598

Query: 394 RCGAVEMAHSVF 405
           R G V+ A+S +
Sbjct: 599 RAGKVDEAYSFY 610



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 132/272 (48%), Gaps = 1/272 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S ++     LA  L+    L    +G  +HG++++ G   DI  QN+L+ MY+KC    
Sbjct: 342 ESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQ 401

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
               +F++M E++LVSW  IV+   +NG    G+  + +M+ +   P+   V S+++ C 
Sbjct: 402 QSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACG 461

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S GA   G  IH F L+  +        ++++ Y K G++  A++ F  +   D+  W+ 
Sbjct: 462 SAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWST 521

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS- 275
           +I GY   G G  AL   S  L  G+  +   FI+ L  CS       G  I+  + +  
Sbjct: 522 LIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDF 581

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
            +  ++     ++D+  ++  +D A+  ++ M
Sbjct: 582 RMSPNLEHRACVVDLLSRAGKVDEAYSFYKMM 613


>gi|302766239|ref|XP_002966540.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
 gi|300165960|gb|EFJ32567.1| hypothetical protein SELMODRAFT_61257 [Selaginella moellendorffii]
          Length = 630

 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 151/592 (25%), Positives = 289/592 (48%), Gaps = 12/592 (2%)

Query: 178 KNPFVGCSVLNFYAKLG---DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           ++  +G  ++  Y K G    +A A  VF  +   DV  W+ +I  Y   G+  EA+N+ 
Sbjct: 32  RSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSWSCIIAAYGQAGHCREAINLF 91

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  E    ++   ++ L  CS   D  +G  IH  I+  ++  S+ +  AL++MY K 
Sbjct: 92  QRMDVEP---NEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKC 148

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             ++ A  VF+++  KDV+SW  +   F++  +  Q        I +  +PN VTF   +
Sbjct: 149 GAIEQARAVFDQIPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAI 208

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C     LD G ++    +  G   +  + ++L+ M+ +  + E A SVF  +  +N  
Sbjct: 209 TACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRV 268

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN +++ +  +      +  F  +   G++ +  +F  V+  C  +   +   +IH  +
Sbjct: 269 SWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQL 328

Query: 475 IKTGFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
                 S   +   +SL+ +Y   G L+ +          ++ SW AM++A    G+  +
Sbjct: 329 ELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSK 388

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+ ++  +V    +PD  +L  ++ + + +G     + +H  V    F  ++ + +A+I+
Sbjct: 389 ALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALIN 448

Query: 593 AYAKCGDIKGARMAFD----QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
            Y +CG ++ AR  FD    ++  + D + +++L+  YAHHG    A+ ++  M L  +Q
Sbjct: 449 MYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQ 508

Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           P   T+VS++++CSH GL+ +    F SM   + +   PD + C+VD+L R G++  A+ 
Sbjct: 509 PDSVTYVSILNSCSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAED 568

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           V+  MPFQP    + +LL  C++HG+   G  A+   + + P    + VLLS
Sbjct: 569 VVRNMPFQPDVVAWNTLLGCCKVHGDARRGAVAARNAVGISPGFAGSTVLLS 620



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 274/593 (46%), Gaps = 31/593 (5%)

Query: 58  KSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCG---YFGWGLRVFDEMAERNLVSW 113
           +S   G +VH HI+  G F   + L N LI MY KCG          VFD+M ++++VSW
Sbjct: 12  RSLADGRRVHDHILATGHFLRSVHLGNLLIQMYRKCGGTSSLADARAVFDQMPKKDVVSW 71

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           + I++A  Q G     + ++  M      PNE  + S +  C        G +IH   L 
Sbjct: 72  SCIIAAYGQAGHCREAINLFQRMDVE---PNEMVIVSTLAACSGAKDLALGMAIHARILS 128

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
             + K+ FVG ++LN YAK G +  A  VF  I   DV  W AMI  +A  G   +AL  
Sbjct: 129 PDLRKSVFVGTALLNMYAKCGAIEQARAVFDQIPHKDVVSWTAMITAFAQMGDCRQALET 188

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           +  M+   +  +  TF+ A+  CS     D GR+IH  +I   +   I+I NAL+ MY K
Sbjct: 189 LEGMIQARVQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAK 248

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
            S  + A  VF+RM D++ +SWN++   F+ +        LFH   L G +P+ V+F  +
Sbjct: 249 GSSAEEALSVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGV 308

Query: 354 LRQCGKLLDL----DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
           L  C     L     +  QL+  A+H     + +V +SL+  + +CG +E A  +F  + 
Sbjct: 309 LSACSSTRCLRSCKRIHSQLELAAVHSP--PDLSVENSLVTAYAKCGDLEAAERIFQRIP 366

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            KN+ +W  +L+ Y F+   +  L+ +  +    ++ +      V+       +  +  +
Sbjct: 367 GKNVVSWTAMLTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARK 426

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER-----LDMASWGAMMSAL 524
           +H  +  + F     I ++LI  Y   G L+ +    +G ER      D  +W ++++  
Sbjct: 427 LHARVASSSFMLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGY 486

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
            H GH   A+ ++  +   G +PD     +ILNSC+  G   + +  H FV  +    E 
Sbjct: 487 AHHGHAEYAILLYRDMHLEGVQPDSVTYVSILNSCSHAGLLAQAR--HFFVSMV----ED 540

Query: 585 YVASA-------VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           +  +A       ++D   + G +  A           DV+ +NTL+     HG
Sbjct: 541 HCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLLGCCKVHG 593



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 195/426 (45%), Gaps = 7/426 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  + + +  +L+     K   LG  +H  I+       +F+   L+ MY+KCG      
Sbjct: 96  VEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYAKCGAIEQAR 155

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VFD++  +++VSWT +++A  Q G+    L+    M      PN     + +  C S  
Sbjct: 156 AVFDQIPHKDVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTFVAAITACSSRE 215

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH   + + +  +  +  ++++ YAK      A  VF  +   +   WN+MI 
Sbjct: 216 FLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDRNRVSWNSMIA 275

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            +A       A+ +   M  EGI  D  +F+  L  CS        ++IH  +  + V  
Sbjct: 276 AFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTRCLRSCKRIHSQLELAAVHS 335

Query: 280 S--ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
              +S+ N+L+  Y K   ++ A ++F+R+  K+V+SW  +   ++ + N  +   L+ K
Sbjct: 336 PPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDK 395

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            +    +P+ V    ++     + D+ L  +L        F+ +  + ++LI M+ RCG+
Sbjct: 396 MVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQNALINMYTRCGS 455

Query: 398 VEMAHSVFDNVSYKNI-----TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
           +E A  VFD +  KN+      TW+ L++GY  +      +  + ++   GV+ +  T+ 
Sbjct: 456 LEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQPDSVTYV 515

Query: 453 YVVETC 458
            ++ +C
Sbjct: 516 SILNSC 521



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 184/403 (45%), Gaps = 24/403 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +P+    +++   + +    G ++H  ++ LG   DI +QN L++MY+K       L
Sbjct: 197 VQPNPVTFVAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEAL 256

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF  M +RN VSW  +++A   + +    + ++  M   G  P++ +   V+  C S  
Sbjct: 257 SVFQRMEDRNRVSWNSMIAAFAASAQSCAAMGLFHGMNLEGIKPDDVSFLGVLSACSSTR 316

Query: 160 ASEFGYSIHCFALKIRIEKNP--FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                  IH       +   P   V  S++  YAK GD+ AAER+F  I   +V  W AM
Sbjct: 317 CLRSCKRIHSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAM 376

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           +  Y   G G +AL +   M+ + I  D    +N +   SLV D  + R++H  +  S  
Sbjct: 377 LTAYTFHGNGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSF 436

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFE-----RMADKDVISWNTLFGGFSENKNPGQTA 332
              I I NALI+MY +   ++ A +VF+      +  +D ++W++L  G++ + +     
Sbjct: 437 MLKIQIQNALINMYTRCGSLEEARRVFDGIERKNLVARDTVTWSSLVAGYAHHGHAEYAI 496

Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS------ 386
            L+    L G +P+ VT+  +L  C        GL  Q        +++  + +      
Sbjct: 497 LLYRDMHLEGVQPDSVTYVSILNSCSH-----AGLLAQARHFFVSMVEDHCLAAWPDHWK 551

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCC 428
            ++ +  R G V  A  V  N+ ++ ++  WN LL      CC
Sbjct: 552 CMVDVLGRAGFVGRAEDVVRNMPFQPDVVAWNTLL-----GCC 589


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 182/618 (29%), Positives = 294/618 (47%), Gaps = 52/618 (8%)

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           +VF ++   DV  WN M+  Y       EA+     M+  GI     +F+N     S V 
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114

Query: 261 DFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           DF     ++G++++  +E    + +V++ I MY +   +D   KVF+   +K    WNT+
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNH-----VTFSILLRQCGKLLDLDLGLQLQCLA 373
            GG  +N +  +   LF    L   +  H     VTF   L    +L  L LG Q+    
Sbjct: 175 IGGHIQNNSFLEGVYLF----LQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFT 230

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           +    +    V ++++ M+ RC +V+ +  VF+ +  K++ +WN ++SG+  N  D + L
Sbjct: 231 MKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGL 290

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
                + + G   +  T   ++       N+++  Q H  +I+ G    G + S LI  Y
Sbjct: 291 MLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMY 349

Query: 494 VNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
              G +  S   FE +N   R D A+W A+++     G   +A   F  ++E   +P+  
Sbjct: 350 AKSGLIRISQRVFENNNIQNR-DQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAV 408

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            L +IL +C+++G+    K +H   I+   +  ++V +A++D Y+K G I  A   F QS
Sbjct: 409 TLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQS 468

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
              N V  Y T+I+ Y  HG+   A+ +F  MK + +QP   TFV+V+SACS+ GLVD+G
Sbjct: 469 SERNSV-TYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEG 527

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA----------KHVIEIMPFQPSPT 720
             +F+SM   + +QPS   Y C+ DML R G + +A           HVIEI        
Sbjct: 528 LRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEI-------- 579

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA--HVLLSK--------------RKR 764
            + SLL  CR+HG+ ELGE  S +LL +   +  A   VLLS               RK 
Sbjct: 580 -WGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKS 638

Query: 765 QREGNLLDHEGVCNVNDG 782
            RE  L    G   ++ G
Sbjct: 639 MREKGLRKEVGCSWIDTG 656



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 148/619 (23%), Positives = 287/619 (46%), Gaps = 25/619 (4%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF  M +R++++W  +VS  ++   +   ++ +  M   G  P+  +  +V     S+G
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114

Query: 160 ASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
             +    ++   LK+  E   + FV  S ++ YA+LG +    +VF S        WN M
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174

Query: 218 IGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
           IGG+       E + + + +M  E   +D  TF++AL   S +    +G+Q+H   +++ 
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
              S++++NA++ MY + + +  +F+VFE+M +KDV+SWNT+  GF +N    +   L +
Sbjct: 235 TVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVY 294

Query: 337 KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
           +    G   + VT + LL     L + ++G Q     +  G +  + + S LI M+ + G
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHG-IKFDGMDSYLIDMYAKSG 353

Query: 397 AVEMAHSVFD--NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            + ++  VF+  N+  ++  TWN +++GY  N        TF  + E  +  N  T   +
Sbjct: 354 LIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASI 413

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLD 513
           +  C    +  +  Q+HG  I+       ++ ++L+  Y   G ++ +   F+  +ER +
Sbjct: 414 LPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSER-N 472

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
             ++  M+      G    A+++FHS+ ++G +PD      +L++C+  G       I  
Sbjct: 473 SVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFE 532

Query: 574 FVIKLGFNTEVYVAS--AVIDAYAKCGDIKGARMAFDQSFNSNDVI-VYNTLIMAYAHHG 630
             +K  F  +   A    V D   + G +  A     Q      VI ++ +L+ A   HG
Sbjct: 533 -SMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHG 591

Query: 631 LVSEAMEIFDKMKLAN----LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
            +    E+ +++   N    L   Q    ++ +  ++   VDK   L KSM  + G++  
Sbjct: 592 HIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDK---LRKSMREK-GLRKE 647

Query: 687 PDCY-----GCLVDMLSRN 700
             C      G LV  +S++
Sbjct: 648 VGCSWIDTGGLLVRFVSKD 666



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 238/511 (46%), Gaps = 26/511 (5%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           ++G ++KLG  + ND+F+ ++ I+MY++ G      +VFD   E++   W  ++   IQN
Sbjct: 122 LYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQN 181

Query: 124 GEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
             F  G+ +++  MKT   + ++    S +     +     G  +H F +K     +  V
Sbjct: 182 NSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTV 241

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++L  Y++   V  +  VF  +   DV  WN MI G+   G   E L +V  M  +G 
Sbjct: 242 LNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGF 301

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D  T  + L   S + + +IG+Q H  +IR  ++    + + LIDMY KS  +  + +
Sbjct: 302 IADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQR 360

Query: 303 VFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           VFE   + ++D  +WN +  G+++N    Q    F   +    RPN VT + +L  C  L
Sbjct: 361 VFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSL 420

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++LG QL  +++         V ++L+ M+ + GA+  A SVF   S +N  T+  ++
Sbjct: 421 GSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMI 480

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS---ENQQMVGQIHGAIIKT 477
            GY  +    + L  F ++ +SG++ +  TF  V+  C  +   +    + +      K 
Sbjct: 481 LGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKI 540

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVT 535
             S+  Y C + +   V  G++  ++EF    G E   +  WG+++ A    GH      
Sbjct: 541 QPSTAHYCCVADMLGRV--GRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGH------ 592

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
                +E GE+    +L   +NS   +  YQ
Sbjct: 593 -----IELGEEVSNRLLE--MNSVDRLAGYQ 616



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 172/329 (52%), Gaps = 3/329 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +    +L+    L+   LG Q+H   +K      + + N ++ MYS+C        VF
Sbjct: 203 DDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVF 262

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           ++M E+++VSW  ++S  IQNG  + GL +  +M+  GF+ +   V S++    ++   E
Sbjct: 263 EKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNRE 322

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYS--ISSDDVGCWNAMIGG 220
            G   H + ++  I K   +   +++ YAK G +  ++RVF +  I + D   WNA+I G
Sbjct: 323 IGKQTHAYLIRHGI-KFDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAG 381

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y   G   +A      ML + +  +  T  + L  CS +   ++G+Q+HG+ IR  ++ +
Sbjct: 382 YTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQN 441

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           I +  AL+DMY KS  ++YA  VF + ++++ +++ T+  G+ ++       SLFH    
Sbjct: 442 IFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKK 501

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           SG +P+ +TF  +L  C     +D GL++
Sbjct: 502 SGIQPDAITFVAVLSACSYAGLVDEGLRI 530



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 10/213 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           LR + + LA  L    +L S  LG Q+HG  ++     +IF++  L+ MYSK G   +  
Sbjct: 403 LRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAE 462

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF + +ERN V++T ++    Q+G  +  L ++  MK +G  P+     +V+  C   G
Sbjct: 463 SVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAG 522

Query: 160 ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD--VGCWNA 216
             + G  I        +I+ +    C V +   ++G V  A      +  +   +  W +
Sbjct: 523 LVDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGS 582

Query: 217 MIGG---YAHCGYGFEALNVVSSMLFEGITMDK 246
           ++G    + H   G E    VS+ L E  ++D+
Sbjct: 583 LLGACRLHGHIELGEE----VSNRLLEMNSVDR 611



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 70/336 (20%), Positives = 140/336 (41%), Gaps = 36/336 (10%)

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           R     + H VF  +  +++  WN ++S Y       + ++ F  + + G++ +  +F  
Sbjct: 46  RSRLSRLLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVN 105

Query: 454 VVETCCRSENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           V        + +    ++G ++K G  +++  ++ SS I  Y   G LD   +  +    
Sbjct: 106 VFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLE 165

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG--TILNSCAAIGAYQ--- 566
                W  M+   +      E V +F   +    K +  IL   T L++  A+   Q   
Sbjct: 166 KSAEVWNTMIGGHIQNNSFLEGVYLFLQAM----KTEHTILDDVTFLSALTAVSQLQCLG 221

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             + +H F +K      V V +A++  Y++C  ++ +   F++     DV+ +NT+I  +
Sbjct: 222 LGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEK-MPEKDVVSWNTMISGF 280

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS-----------HKGLVDKGCLLFK 675
             +GL  E + +  +M+         T  S++SA S           H  L+  G + F 
Sbjct: 281 IQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHG-IKFD 339

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            MDS             L+DM +++G +  ++ V E
Sbjct: 340 GMDS------------YLIDMYAKSGLIRISQRVFE 363


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 276/536 (51%), Gaps = 7/536 (1%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           +A  + + M      +D +   + L+ C L+  F +G+++HG ++++     + + NALI
Sbjct: 107 DAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALI 166

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
            MY +   +  A  +F+++ +KDV+SW+T+   +  +    +   L     +   +P+ +
Sbjct: 167 MMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEI 226

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFD 406
               +     +L DL LG  +    +  G   +  V   ++LI M+ +C  +  A  VFD
Sbjct: 227 GMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFD 286

Query: 407 NVSYKNITTWNELLSGY--CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
            +S  +I +W  +++ Y  C N  +   ++ F  +   G+  N  T   +V+ C  +   
Sbjct: 287 GLSKASIISWTAMIAAYIHCNNLNEG--VRLFVKMLGEGMFPNEITMLSLVKECGTAGAL 344

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           ++   +H   ++ GF+    + ++ I  Y   G + ++    +  +  D+  W AM+S+ 
Sbjct: 345 ELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSY 404

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
                  EA  IF  +   G +P+E  + ++L  CA  G+ +  K IH ++ K G   ++
Sbjct: 405 AQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            + ++ +D YA CGDI  A   F ++    D+ ++N +I  +A HG    A+E+F++M+ 
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEA-TDRDISMWNAMISGFAMHGHGEAALELFEEMEA 523

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             + P+  TF+  + ACSH GL+ +G  LF  M  ++G  P  + YGC+VD+L R G L+
Sbjct: 524 LGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLD 583

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +A  +I+ MP +P+  V+ S L+ C++H N +LGEWA+++ L L P     +VL+S
Sbjct: 584 EAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMS 639



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/598 (24%), Positives = 264/598 (44%), Gaps = 22/598 (3%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+HGH +K                 S C Y    L   +  +    +   LI S    N 
Sbjct: 61  QLHGHFIKTS---------------SNCSY-RVPLAALESYSSNAAIHSFLITSYIKNNC 104

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             D   K+Y  M+      + F + SV+K C  + +   G  +H F +K     + FV  
Sbjct: 105 PADAA-KIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCN 163

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           +++  Y+++G +A A  +F  I + DV  W+ MI  Y   G   EAL+++  M    +  
Sbjct: 164 ALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKP 223

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEV--ECSISIVNALIDMYIKSSGMDYAFK 302
            +   I+     + +AD  +G+ +H  ++R+    +  + +  ALIDMY+K   + YA +
Sbjct: 224 SEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARR 283

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF+ ++   +ISW  +   +    N  +   LF K +  G  PN +T   L+++CG    
Sbjct: 284 VFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGA 343

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+LG  L    L  GF     + ++ I M+ +CG V  A SVFD+   K++  W+ ++S 
Sbjct: 344 LELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISS 403

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N C  +    F ++   G+  N  T   ++  C ++ + +M   IH  I K G    
Sbjct: 404 YAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGD 463

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + +S +  Y N G +D +      A   D++ W AM+S     GH   A+ +F  +  
Sbjct: 464 MILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEA 523

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
            G  P++      L++C+  G  Q  K + H  V + GF  +V     ++D   + G + 
Sbjct: 524 LGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLD 583

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
            A           ++ V+ + + A   H  +   +  +   +  +L+P ++ +  +MS
Sbjct: 584 EAHELIKSMPMRPNIAVFGSFLAACKLHKNIK--LGEWAAKQFLSLEPHKSGYNVLMS 639



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 225/471 (47%), Gaps = 4/471 (0%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           + S +LG +VHG +VK GF  D+F+ N LI MYS+ G       +FD++  +++VSW+ +
Sbjct: 137 IPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTM 196

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-R 175
           + +  ++G  D  L +  DM      P+E  + S+  V   +   + G ++H + ++  +
Sbjct: 197 IRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGK 256

Query: 176 IEKNPFVGCSVL-NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             K+    C+ L + Y K  ++A A RVF  +S   +  W AMI  Y HC    E + + 
Sbjct: 257 CGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLF 316

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML EG+  ++ T ++ ++ C      ++G+ +H   +R+    S+ +  A IDMY K 
Sbjct: 317 VKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKC 376

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  A  VF+    KD++ W+ +   +++N    +   +F      G RPN  T   LL
Sbjct: 377 GDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLL 436

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C K   L++G  +       G   +  + +S + M+  CG ++ AH +F   + ++I+
Sbjct: 437 MICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS 496

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI-HGA 473
            WN ++SG+  +      L+ F  +   GV  N  TF   +  C  S   Q   ++ H  
Sbjct: 497 MWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKM 556

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           + + GF+        ++      G LD + E       R ++A +G+ ++A
Sbjct: 557 VHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA 607



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/475 (22%), Positives = 227/475 (47%), Gaps = 26/475 (5%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           +Q+HG  I++   CS  +  A ++ Y  ++ + ++F                L   + +N
Sbjct: 60  QQLHGHFIKTSSNCSYRVPLAALESYSSNAAI-HSF----------------LITSYIKN 102

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
             P   A ++     + +  ++     +L+ C  +    LG ++    +  GF  +  V 
Sbjct: 103 NCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVC 162

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           ++LI M+   G++ +A  +FD +  K++ +W+ ++  Y  +    + L    ++    V+
Sbjct: 163 NALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVK 222

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY----ICSSLIKSYVNFGQLDN 501
            +      +        + ++   +H  +++ G   CG     +C++LI  YV    L  
Sbjct: 223 PSEIGMISITHVLAELADLKLGKAMHAYVMRNG--KCGKSGVPLCTALIDMYVKCENLAY 280

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +    +G  +  + SW AM++A +H  + +E V +F  ++  G  P+E  + +++  C  
Sbjct: 281 ARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGT 340

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
            GA +  K +H F ++ GF   + +A+A ID Y KCGD++ AR  FD SF S D+++++ 
Sbjct: 341 AGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD-SFKSKDLMMWSA 399

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I +YA +  + EA +IF  M    ++P++ T VS++  C+  G ++ G  +   +D Q 
Sbjct: 400 MISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ- 458

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           G++         VDM +  G + D  H +         +++ +++SG  +HG+ E
Sbjct: 459 GIKGDMILKTSFVDMYANCGDI-DTAHRLFAEATDRDISMWNAMISGFAMHGHGE 512


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/578 (26%), Positives = 277/578 (47%), Gaps = 5/578 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI--- 242
           +L+ YA LGD+A+A  VF      D   + AM+          +A+ +   M        
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +    AL+ C   A++  GR +H   I+        ++N+L+DMY K+  ++ A K
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADGF-VMNSLVDMYAKAEDLECARK 221

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFER+ D++V+SW ++  G  +N        LF+K       P+  T + ++  C  L  
Sbjct: 222 VFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFG 281

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +    +  G +    ++++L+ M+ +CG ++ A  VFD +SY ++  W  ++ G
Sbjct: 282 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVG 341

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    D L+ F +   + +  N  T   V+    +  +  +   IHG  +K G    
Sbjct: 342 YTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEY 401

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L+  Y     +  +          D+ +W +M+S         +A+ +F  +  
Sbjct: 402 NVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSL 461

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PD   +   L++   +G     KSIH + +K  F + +YV +A+++ Y KCGD+  
Sbjct: 462 QGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLS 521

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD+  N  + + +  +I  Y   G  + ++ +F +M    + P+   F S++S CS
Sbjct: 522 ARRVFDE-MNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCS 580

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G+V  G   F SM   + + PS   Y C+VD+L+R G LEDA   I+ MP Q   +V+
Sbjct: 581 HSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVW 640

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + L GC +H   +  E A +++++L P+    +VL+S
Sbjct: 641 GAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLIS 678



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/638 (23%), Positives = 284/638 (44%), Gaps = 10/638 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L  RVL  ++  H   L     +  +  L++ Y+  G       VFD     +  S+  +
Sbjct: 76  LSLRVLHARLLTHPQGL-LLGSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAM 134

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMP---NEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           +   +Q       + ++ DM+     P   ++F +   +K C+      +G S+HC A+K
Sbjct: 135 LWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIK 194

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
           +    + FV  S+++ YAK  D+  A +VF  I   +V  W +MI G    G+  + L +
Sbjct: 195 VG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLL 253

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
            + M  + +   +YT    +  CS +     GR +HG +I+  +  +  I  AL+DMY+K
Sbjct: 254 FNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVK 313

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +D+A  VF+ ++  D++ W T+  G+++N NP     LF     +   PN VT + +
Sbjct: 314 CGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATV 373

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L    +L DL LG  +  LA+  G ++   V ++L+ M+ +C AV  A  +F  +S K++
Sbjct: 374 LSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDV 433

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
             WN ++SGY  N    D L  F  +   G   +  +    +       +  +   IHG 
Sbjct: 434 VAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGY 493

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            +K  F S  Y+ ++L+  Y   G L ++    +     +  +W AM+     QG +  +
Sbjct: 494 AVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGS 553

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVID 592
           + +F  +++ G  P++    +IL++C+  G     K               +   + ++D
Sbjct: 554 IHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVD 613

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
             A+ G+++ A    D      D  V+   +     H  +  A E   +M +  L P + 
Sbjct: 614 VLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMV--LHPERP 671

Query: 653 T-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             +V + +  +  G+ DK   + + M  + G+   P C
Sbjct: 672 DLYVLISNLYTSNGMWDKSLAIRRWMQEK-GLVKLPGC 708



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 12/406 (2%)

Query: 29  CGNNQFCSDSFL-----RKDPI-----FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           C  N F SD  L     R+D +      +A  ++    L     G  +HG ++K G  ++
Sbjct: 241 CVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSN 300

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
            F+   L+ MY KCG       VFDE++  +LV WT ++    QNG     L++++D + 
Sbjct: 301 SFISAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRF 360

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
               PN     +V+     +     G SIH  A+K+ + +   VG ++++ YAK   V+ 
Sbjct: 361 ANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSE 420

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+R+F  IS+ DV  WN+MI GYA    G +AL +   M  +G + D  + +NAL     
Sbjct: 421 ADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVC 480

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D  IG+ IHG  ++     +I +  AL+++Y K   +  A +VF+ M D++ ++W  +
Sbjct: 481 LGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAM 540

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCG 377
            GG+    +   +  LF + +  G  PN + F+ +L  C     +  G +    +A H  
Sbjct: 541 IGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFN 600

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
                   + ++ +  R G +E A    DN+  + + + W   L G
Sbjct: 601 ITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHG 646


>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
 gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
 gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 794

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/696 (24%), Positives = 342/696 (49%), Gaps = 20/696 (2%)

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           +  NNLI+MY +C       +VFD+M +RN+V+    +SA  +     MG  ++  +   
Sbjct: 23  YANNNLISMYVRCSSLEQARKVFDKMPQRNIVT-LFGLSAVFE--YVSMGSSLHSQIIKL 79

Query: 140 G------FMP-NEFA--VGSVMKVCVSMGASEFGYSIHCFALKI---RIEKNPFVGCSVL 187
           G      FMP NE A  V  + + CVS+   +    IH   L        ++P+   +++
Sbjct: 80  GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEALNVVSSMLFEGITMDK 246
           + Y + G +  A +VF  +   +V  +NA+   Y+ +  +   A  + + M FE +  + 
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            TF + +Q C+++ D  +G  ++  II+     ++ +  +++ MY     ++ A ++F+ 
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           + ++D ++WNT+  G  +N         F   ++SG  P   T+SI+L  C KL    LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
             +    +    L +  + ++L+ M+C CG +  A  VF  +   N+ +WN ++SG   N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379

Query: 427 CCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
                 +  +  +   S    +  TF   +      E       +HG + K G+    ++
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++L+  Y    + +++ +  +  +  D+  W  M+      G++  AV  F  +     
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           + D + L +++ +C+ +   ++ +  H   I+ GF+  + V  A++D Y K G  + A  
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F  + N  D+  +N+++ AY+ HG+V +A+  F+++      P   T++S+++ACSH+G
Sbjct: 560 IFSLASNP-DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRG 618

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRS 724
              +G  L+  M  Q G++     Y C+V+++S+ G +++A  +IE  P       ++R+
Sbjct: 619 STLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRT 677

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS C    N ++G +A+E++L L P++ A H+LLS
Sbjct: 678 LLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 259/567 (45%), Gaps = 6/567 (1%)

Query: 65  QVHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           Q+H  ++  G    T   +  NNLI+MY +CG      +VFD+M  RN+VS+  + SA  
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174

Query: 122 QNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +N +F      +   M      PN     S+++VC  +     G S++   +K+    N 
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            V  SVL  Y+  GD+ +A R+F  +++ D   WN MI G        + L    +ML  
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+   ++T+   L GCS +  + +G+ IH  II S+    + + NAL+DMY     M  A
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGK 359
           F VF R+ + +++SWN++  G SEN    Q   ++ + + +S  RP+  TFS  +    +
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
                 G  L       G+     V ++L+ M+ +    E A  VFD +  +++  W E+
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           + G+         ++ F  ++      +G +   V+  C      +     H   I+TGF
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                +C +L+  Y   G+ + +    + A   D+  W +M+ A    G   +A++ F  
Sbjct: 535 DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           ++E G  PD     ++L +C+  G+  + K +   + + G        S +++  +K G 
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGL 654

Query: 600 IKGARMAFDQS-FNSNDVIVYNTLIMA 625
           +  A    +QS   +N   ++ TL+ A
Sbjct: 655 VDEALELIEQSPPGNNQAELWRTLLSA 681



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 225/482 (46%), Gaps = 21/482 (4%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+  ++G+ ++  I+KLG+++++ +Q +++ MYS CG      R+FD +  R+ V+W  +
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +  +++N + + GL  + +M  +G  P +F    V+  C  +G+   G  IH   +    
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  +  ++L+ Y   GD+  A  VF  I + ++  WN++I G +  G+G +A+ +   
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391

Query: 237 ML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +L       D+YTF  A+   +    F  G+ +HG + +   E S+ +   L+ MY K+ 
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
             + A KVF+ M ++DV+ W  +  G S   N       F +     +R +  + S ++ 
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG 511

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  +  L  G    CLA+  GF    +V  +L+ M+ + G  E A ++F   S  ++  
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIH 471
           WN +L  Y  +      L  F  I E+G   +  T+  ++  C       + + +  Q+ 
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-------SNGAERLDMASWGAMMSAL 524
              IK GF    Y C  ++      G +D + E        +N AE      W  ++SA 
Sbjct: 632 EQGIKAGFKH--YSC--MVNLVSKAGLVDEALELIEQSPPGNNQAEL-----WRTLLSAC 682

Query: 525 VH 526
           V+
Sbjct: 683 VN 684



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 3/318 (0%)

Query: 43  DPIFLAKSLSLS--ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           DP     S+ L+    L S  LG  +H  I+      D+ L N L+ MY  CG       
Sbjct: 297 DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY 356

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMG 159
           VF  +   NLVSW  I+S   +NG  +  + MY  + + +   P+E+   + +       
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  +H    K+  E++ FVG ++L+ Y K  +  +A++VF  +   DV  W  MI 
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G++  G    A+     M  E    D ++  + +  CS +A    G   H L IR+  +C
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            +S+  AL+DMY K+   + A  +F   ++ D+  WN++ G +S++    +  S F + +
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596

Query: 340 LSGSRPNHVTFSILLRQC 357
            +G  P+ VT+  LL  C
Sbjct: 597 ENGFMPDAVTYLSLLAAC 614



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 2/289 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D    + ++S +   +  V G  +HG + KLG+   +F+   L++MY K        +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFD M ER++V WT ++    + G  ++ ++ +++M       + F++ SV+  C  M  
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G   HC A++   +    V  ++++ Y K G    AE +F   S+ D+ CWN+M+G 
Sbjct: 519 LRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGA 578

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y+  G   +AL+    +L  G   D  T+++ L  CS       G+ +   +    ++  
Sbjct: 579 YSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAG 638

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSENKN 327
               + ++++  K+  +D A ++ E+    +     W TL       +N
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRN 687



 Score = 41.2 bits (95), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 7/143 (4%)

Query: 26  HRLCGNNQFCSDSFL-------RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           H   GN++     F+       R D   L+  +    ++     G   H   ++ GF   
Sbjct: 478 HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV 537

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           + +   L+ MY K G +     +F   +  +L  W  ++ A  Q+G  +  L  +  +  
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597

Query: 139 NGFMPNEFAVGSVMKVCVSMGAS 161
           NGFMP+     S++  C   G++
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGST 620


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 177/639 (27%), Positives = 308/639 (48%), Gaps = 25/639 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H  A+   +     V  S+   YAK G   +A  VF +  + DV  +N ++  +    
Sbjct: 53  ALHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPA 112

Query: 226 YGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
              EAL+  S ML  G +  D  T   AL   +   +  + RQ+H L  RS +   + + 
Sbjct: 113 ---EALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVG 169

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN-PGQTASLFHKFILSGS 343
           NAL+  Y +   +  A  VF+ M  +D++SWN L  G +++ + P +   +F + +  G 
Sbjct: 170 NALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGD 229

Query: 344 -RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            +P+ ++   ++  CG    L+LG Q+   A+  G     ++ + L+ M+ +CGA   A 
Sbjct: 230 VQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSAR 289

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC---C 459
            +FD +S +++ +W   +S         D L  F  +   GV  N  TF  ++      C
Sbjct: 290 RLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADC 344

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
            +   QMV   H A +K   S      +SLI  Y    ++D++    +   R ++ +W A
Sbjct: 345 PARGAQMV---HAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNA 401

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT--KSIHPFVIK 577
           ++S     G  ++A+ +F S+      P+E    ++L++  A+        +  H   + 
Sbjct: 402 VISGYAQNGRCNDALELFSSMARC-LTPNETTFASVLSAVTAVETVSMAYGQMYHSRALS 460

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
           +GF    YVA A+ID YAK G+++ +R AF ++     +I +  +I A A HG     M 
Sbjct: 461 MGFGDSEYVAGALIDMYAKRGNLEESRKAFHET-EQRSLIAWTAIISANARHGSYGAVMS 519

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F  M  + + P     ++V++AC + G+VD G  +F SM +  G++  P+ Y C+VDML
Sbjct: 520 LFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAADRGVELWPEHYSCVVDML 579

Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHV 757
            R G L +A+ ++  MP  PS +  +SLL  CRIHG+ E+GE  +  L    P    A+V
Sbjct: 580 GRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGERIARILTEKEPTESGAYV 639

Query: 758 LLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLELKLEF 796
           LLS        ++ D +GV  V   ++   +K E+   +
Sbjct: 640 LLSNIY----ADVGDWDGVAKVRRKMRDRGVKKEIGFSW 674



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/524 (25%), Positives = 229/524 (43%), Gaps = 18/524 (3%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R +PI  + ++  S+      L    H   V  G      + N+L A Y+K G F   + 
Sbjct: 33  RVNPIAFSAAVRASDPASLPAL----HAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVG 88

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGE-FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           VF     R++ S+  I+SA     E  D    M   +++    P+       + +    G
Sbjct: 89  VFAAARARDVSSYNTILSAFPDPAEALDFASWM---LRSGAVRPDAVTCTVALSLAAGRG 145

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  +H  A +  +  + FVG +++  Y++ G +  A  VF  + + D+  WNA+I 
Sbjct: 146 EGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALIC 205

Query: 220 GYAHCGY-GFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           G A  G    E + V   ML +G +  D+ +  + +  C      ++GRQ+HG  ++  V
Sbjct: 206 GLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGV 265

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           E  +SI N L+ MY K      A ++F+ M+++DV+SW T      E+       +LF+ 
Sbjct: 266 EGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDGED-----ALTLFNG 320

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
               G  PN VTF  L+              +    L      E   ++SLI M+ +   
Sbjct: 321 MRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARR 380

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A  VFD +  + I  WN ++SGY  N    D L+ F ++    +  N  TF  V+  
Sbjct: 381 MDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNETTFASVLSA 439

Query: 458 CCRSENQQMV-GQI-HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
               E   M  GQ+ H   +  GF    Y+  +LI  Y   G L+ S +  +  E+  + 
Sbjct: 440 VTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLI 499

Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +W A++SA    G     +++F  +  +G  PD  +L  +L +C
Sbjct: 500 AWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTAC 543



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 195/423 (46%), Gaps = 10/423 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D +    +LSL+       L  Q+H    + G   D+F+ N L+  YS+ G  G   
Sbjct: 127 VRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEAR 186

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMG-LKMYVDMKTNG-FMPNEFAVGSVMKVCVS 157
            VFD+M  R+LVSW  ++    Q+G+     + +++ M  +G   P+  +V SV+  C  
Sbjct: 187 SVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGG 246

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
            G  E G  +H FA+K+ +E    +G  ++  Y K G   +A R+F ++S  DV  W   
Sbjct: 247 EGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTA 306

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I        G +AL + + M  +G+  ++ TF+  +            + +H   +++ V
Sbjct: 307 I-----SMDGEDALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAV 361

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
               +  N+LI MY K+  MD A  VF+ M  +++I+WN +  G+++N        LF  
Sbjct: 362 SGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSS 421

Query: 338 FILSGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
                + PN  TF+ +L     +  + +  G      AL  GF D E V  +LI M+ + 
Sbjct: 422 MARCLT-PNETTFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKR 480

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +E +   F     +++  W  ++S    +     V+  F ++  SGV  +G     V+
Sbjct: 481 GNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVL 540

Query: 456 ETC 458
             C
Sbjct: 541 TAC 543



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 8/294 (2%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQ-VHGHIVKLGFTNDIFLQNNLIAMYS 90
           N    D     +  F+A   +L  +  +R  G Q VH   +K   + +    N+LI MY+
Sbjct: 319 NGMRRDGVPPNEVTFVALMSALPADCPAR--GAQMVHAACLKAAVSGEAAASNSLITMYA 376

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           K         VFD M  R +++W  ++S   QNG  +  L+++  M      PNE    S
Sbjct: 377 KARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFAS 435

Query: 151 VMK--VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
           V+     V   +  +G   H  AL +    + +V  ++++ YAK G++  + + F+    
Sbjct: 436 VLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQ 495

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
             +  W A+I   A  G     +++   M   G+  D    +  L  C      D GR I
Sbjct: 496 RSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDI 555

Query: 269 -HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM-ADKDVISWNTLFG 320
              +     VE      + ++DM  ++  +  A ++  RM A   V +  +L G
Sbjct: 556 FDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLG 609


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 176/585 (30%), Positives = 274/585 (46%), Gaps = 73/585 (12%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           ++T +N L   S  A     RQ H  I+++ +     +   L+  Y  +     A  V +
Sbjct: 15  QHTILNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            + + +V S++TL   FS+        S F + +  G  P++      ++ C  L  L  
Sbjct: 73  LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKP 132

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
             Q+  +A   GF  +  V SSL++M+ +C  +  AH VFD +   ++ +W+ L++ Y  
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192

Query: 426 NCCDADVLKTFCNIWESGVEVN-----------------------------------GCT 450
             C  +  + F  + +SGV+ N                                   G T
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTT 252

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN----------FGQLD 500
              V+      E+  M   IHG +IK G  S   + S+LI  Y            F Q+D
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312

Query: 501 -------NSFEFS---NG---------------AERLDMASWGAMMSALVHQGHNHEAVT 535
                  N+F F    NG                  L++ SW +M++     G + EA+ 
Sbjct: 313 HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALE 372

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +  AG KP+   +  +L +C  I A    K+ H F ++ G +T+VYV SA+ID YA
Sbjct: 373 LFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYA 432

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG I+ +R+ FD    + +++ +N +I  YA HG   EAMEIFD M+ +  +P   +F 
Sbjct: 433 KCGRIQASRICFD-GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+SACS  GL ++G   F SM S+YG++   + Y C+V +LSR G LE A  +I  MP 
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            P   V+ +LLS CR+H N  LGE A+EKL  L P N   ++LLS
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLS 596



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 197/467 (42%), Gaps = 70/467 (14%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H HI+K G  ND  L   L++ Y+    F     V D + E N+ S++ ++ A  +  
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           +F   L  +  M T G MP+   + S +K C  + A +    +H  A     + + FV  
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDV-------------GC------------------ 213
           S+++ Y K   +  A RVF  +   DV             GC                  
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 214 ----WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               WN MI G+ H G   EA+ +   M   G   D  T  + L     + D  +G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 270 GLIIRSEVECSISIVNALIDMYIKSS----------GMDY-------------------- 299
           G +I+  +     + +ALIDMY K S           MD+                    
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333

Query: 300 -AFKVFERMADK----DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            + ++F ++ D+    +V+SW ++    S+N    +   LF +  ++G +PN VT   LL
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLL 393

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             CG +  L  G    C +L  G   +  V S+LI M+ +CG ++ +   FD +  KN+ 
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            WN +++GY  +    + ++ F  +  SG + +  +F  V+  C +S
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 125/595 (21%), Positives = 243/595 (40%), Gaps = 77/595 (12%)

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H   LK  +  +  +   +L+ YA     A A  V   +   +V  ++ +I  ++     
Sbjct: 36  HAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQF 95

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
             AL+  S ML  G+  D     +A++ C+ ++     RQ+HG+   S  +    + ++L
Sbjct: 96  HHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSL 155

Query: 288 IDMYIKSSGMDYAFKVFERMADKDV----------------------------------- 312
           + MYIK + +  A +VF+RM + DV                                   
Sbjct: 156 VHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNL 215

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ISWN +  GF+ +    +   +F    L G  P+  T S +L   G L DL +G+ +   
Sbjct: 216 ISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGY 275

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
            +  G + ++ V+S+LI M+ +C        VFD + + ++ + N  + G   N      
Sbjct: 276 VIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESS 335

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM-------------------------- 466
           L+ F  + + G+E+N  ++  ++  CC    + M                          
Sbjct: 336 LRLFRQLKDQGMELNVVSWTSMI-ACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLP 394

Query: 467 -----VGQIHGAI-----IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
                   +HG       ++ G S+  Y+ S+LI  Y   G++  S    +G    ++  
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVC 454

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFV 575
           W A+++     G   EA+ IF  +  +G+KPD      +L++C+  G  +  +   +   
Sbjct: 455 WNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMS 514

Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
            K G    V   + ++   ++ G ++ A     +   + D  V+  L+ +   H  VS  
Sbjct: 515 SKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLG 574

Query: 636 MEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            E+  + KL  L+PS    ++ + +  + KG+ ++     + M    G++ +P C
Sbjct: 575 -EVAAE-KLFELEPSNPGNYILLSNIYASKGMWNE-VNRVRDMMKNKGLRKNPGC 626



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 37/316 (11%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
             D   ++  L    +L+  V+G  +HG+++K G  +D  + + LI MY KC       +
Sbjct: 247 EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQ 306

Query: 101 VFDEM-----------------------------------AERNLVSWTLIVSAAIQNGE 125
           VFD+M                                    E N+VSWT +++   QNG 
Sbjct: 307 VFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGR 366

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L+++ +M+  G  PN   +  ++  C ++ A   G + HCF+L+  I  + +VG +
Sbjct: 367 DMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YAK G + A+   F  I + ++ CWNA+I GYA  G   EA+ +   M   G   D
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486

Query: 246 KYTFINALQGCSLVADFDIGR-QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
             +F   L  CS     + G    + +  +  +E  +     ++ +  ++  ++ A+ + 
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546

Query: 305 ERMA-DKDVISWNTLF 319
            RM  + D   W  L 
Sbjct: 547 RRMPVNPDACVWGALL 562



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 175/454 (38%), Gaps = 72/454 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D   L  ++     L +     QVHG     GF +D F+Q++L+ MY KC       
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH 169

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFD--------MG---------------------- 129
           RVFD M E ++VSW+ +V+A  + G  D        MG                      
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229

Query: 130 -----LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                + M++DM   GF P+   + SV+     +     G  IH + +K  +  +  V  
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGC------------------------------- 213
           ++++ Y K    +   +VF  +   DVG                                
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349

Query: 214 ----WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               W +MI   +  G   EAL +   M   G+  +  T    L  C  +A    G+  H
Sbjct: 350 NVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH 409

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              +R  +   + + +ALIDMY K   +  +   F+ +  K+++ WN +  G++ +    
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAK 469

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKL-LDLDLGLQLQCLALHCGFLDEENVTSSL 388
           +   +F     SG +P+ ++F+ +L  C +  L  +       ++   G        + +
Sbjct: 470 EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACM 529

Query: 389 IYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLS 421
           + +  R G +E A+++   +    +   W  LLS
Sbjct: 530 VTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 176/659 (26%), Positives = 320/659 (48%), Gaps = 17/659 (2%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           +  R+L    L V+A  +  E D  +     + +N          S++ +C ++ +    
Sbjct: 6   LLHRHLQWRNLTVTALQRTPEIDRTIASIQSISSNPCF-------SLLGICKTVSSLR-- 56

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH   +   + ++      +++ Y   G V  A  +F  I + D+  W  MI  Y   
Sbjct: 57  -KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLN 115

Query: 225 GYGFEALNVVSSMLFEGIT-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
               E +   ++ L + +   D   F   L+ CS + + D GR++H  I++     S  +
Sbjct: 116 DSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPDSF-V 174

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           +  L+DMY K   ++ + +VF+ + D++V+ W ++  G+ +N    +   LF++      
Sbjct: 175 LTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLV 234

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
             N  T   L+  C KL  L  G  +    +  GF     + + L+ ++ +CG +  A S
Sbjct: 235 EGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFS 294

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD +S  ++ +W  ++ GY       + LK F +     +  N  T   V+  C ++ +
Sbjct: 295 VFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGS 354

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMS 522
             M   +H   IK G     +  ++L+  Y     + D  + F    ++ D+ +W +++S
Sbjct: 355 LNMGRSVHCLGIKLGSEDATFE-NALVDMYAKCHMIGDARYVFETVFDK-DVIAWNSIIS 412

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-N 581
                G+ +EA+ +F  +      PD   L ++L++CA++GAY+   S+H + IK G  +
Sbjct: 413 GYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLS 472

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             VYV +A+++ YAKCGD + AR+ FD+     + I ++ +I  Y   G  S ++E+F  
Sbjct: 473 GSVYVGTALLNFYAKCGDAESARVIFDE-MGEKNTITWSAMIGGYGIQGDCSRSLELFGD 531

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M    L+P++  F +++SACSH G++ +G   F +M   Y   PS   Y C+VD+L+R G
Sbjct: 532 MLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAG 591

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            LE+A   IE +P QP  ++  + L GCR+H   +LGE A  ++L L P     +VL+S
Sbjct: 592 RLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMS 650



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 246/539 (45%), Gaps = 43/539 (7%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D +  +  L     L+    G ++H  IVK+G + D F+   L+ MY+KC       RVF
Sbjct: 137 DNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVF 195

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DE+ +RN+V WT ++   +QN     GL ++  M+      N++ +GS++  C  +GA  
Sbjct: 196 DEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALH 255

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  +H + +K   + N F+   +L+ Y K GD+  A  VF  +S+ D+  W AMI GYA
Sbjct: 256 QGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYA 315

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             GY  EAL + +   ++ +  +  T  + L  C+     ++GR +H L I+   E   +
Sbjct: 316 QRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DAT 374

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
             NAL+DMY K   +  A  VFE + DKDVI+WN++  G+++N    +   LF +     
Sbjct: 375 FENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDS 434

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMA 401
             P+ +T   +L  C  +    +G  L   A+  G L     V ++L+  + +CG  E A
Sbjct: 435 VYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESA 494

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             +FD +  KN  TW+ ++ GY      +  L+ F ++ +  +E N   F  ++  C   
Sbjct: 495 RVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACS-- 552

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
                    H  ++  G+     +C   + ++V                   M  +  M+
Sbjct: 553 ---------HSGMLGEGWRYFNTMCQ--VYNFVP-----------------SMKHYACMV 584

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA-----IG--AYQRTKSIHP 573
             L   G   EA+     +     +PD  +LG  L+ C       +G  A +R   +HP
Sbjct: 585 DLLARAGRLEEALDFIEKI---PIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHP 640



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 151/654 (23%), Positives = 285/654 (43%), Gaps = 46/654 (7%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           ++H  +V  G + D+  +  L+++Y   G+      +FD +   +L SW +++     N 
Sbjct: 57  KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLND 116

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGS-VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
            +   ++ Y           +  V S V+K C  +  ++ G  +HC  +K+    + FV 
Sbjct: 117 SYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVL 175

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
             +++ YAK  +V  + RVF  I   +V CW +MI GY       E L + + M    + 
Sbjct: 176 TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVE 235

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            ++YT  + +  C+ +     G+ +HG +I+S  + +  +V  L+D+Y K   +  AF V
Sbjct: 236 GNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSV 295

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ ++  D++SW  +  G+++   P +   LF         PN VT S +L  C +   L
Sbjct: 296 FDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSL 355

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           ++G  + CL +  G  ++    ++L+ M+ +C  +  A  VF+ V  K++  WN ++SGY
Sbjct: 356 NMGRSVHCLGIKLGS-EDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGY 414

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSC 482
             N    + L+ F  +    V  +  T   V+  C      ++   +HG  IK G  S  
Sbjct: 415 TQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGS 474

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ ++L+  Y   G  +++    +     +  +W AM+     QG    ++ +F  +++
Sbjct: 475 VYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLK 534

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT--EVYVASAVIDAYAKCGDI 600
              +P+E I  TIL++C+  G                FNT  +VY     +  YA   D+
Sbjct: 535 EKLEPNEVIFTTILSACSHSGMLGEGWRY--------FNTMCQVYNFVPSMKHYACMVDL 586

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
                                     A  G + EA++  +K+    +QP  +   + +  
Sbjct: 587 -------------------------LARAGRLEEALDFIEKIP---IQPDVSLLGAFLHG 618

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV-DMLSRNGYLEDAKHVIEIM 713
           C      D G +  + M     + P   CY  L+ ++ +  G    A  V+E+M
Sbjct: 619 CRLHSRFDLGEVAVRRM---LELHPDKACYYVLMSNLYASEGRWSQANQVMELM 669



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 95/235 (40%), Gaps = 35/235 (14%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF-TNDIFLQNNLIAMYS 90
           +Q  SDS +  D I L   LS   ++ +  +G+ +HG+ +K G  +  +++   L+  Y+
Sbjct: 428 DQMRSDS-VYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYA 486

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG       +FDEM E+N ++W+ ++      G+    L+++ DM      PNE    +
Sbjct: 487 KCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTT 546

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++  C   G    G+            +     C V NF   +   A             
Sbjct: 547 ILSACSHSGMLGEGW------------RYFNTMCQVYNFVPSMKHYA------------- 581

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
                 M+   A  G   EAL+ +  +    I  D       L GC L + FD+G
Sbjct: 582 -----CMVDLLARAGRLEEALDFIEKI---PIQPDVSLLGAFLHGCRLHSRFDLG 628


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 291/571 (50%), Gaps = 10/571 (1%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +AAA R+F  I   D   WN+++  +   G    A  ++ +M   G+  + +   +AL+ 
Sbjct: 51  LAAARRLFDEIPRLDAASWNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRS 110

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
            + +    +G Q+H L +++ +  ++    AL+ MY K      A ++F+ M +++ +SW
Sbjct: 111 AAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSW 170

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N L  G+ E+        LF +    G  P+  TF+ LL          L  QL    + 
Sbjct: 171 NALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCF-LMHQLHGKIVK 229

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLK 434
            G      V ++ I  + +CGA+  +  +FD +  + ++ +WN +L  Y  +  + + ++
Sbjct: 230 YGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMR 289

Query: 435 TFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKS 492
            F ++   SGV+ +  +F  ++  C  +E++   G  IHG + K GF    ++C++LI  
Sbjct: 290 FFASMMRASGVQPDMYSFTSIISAC--AEHRDHGGTVIHGLVSKNGFEGVTHVCNALIAM 347

Query: 493 YVNFGQ---LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           Y  F +   ++++++  +     D  SW +M++     G + +A+  F  +       DE
Sbjct: 348 YTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDE 407

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           Y     L SC+ +   +  + IH  VI+ GF +  +V+S++I  Y+K G +  A  +F++
Sbjct: 408 YAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEE 467

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +  S+ V  +N+++  YA HG       +F++M    +     TFV +++ACSH GLVD+
Sbjct: 468 ADKSSSV-PWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDE 526

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           G  +  +M+S+YG+    + Y C +D+  R G L+ AK +I+ MPF+P   V+ +LL  C
Sbjct: 527 GSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGAC 586

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           R+HGN EL    +  LL   P+  + +VLLS
Sbjct: 587 RVHGNMELASDVASHLLEAEPRQHSTYVLLS 617



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 155/630 (24%), Positives = 283/630 (44%), Gaps = 16/630 (2%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  ++K G T+       L A            R+FDE+   +  SW  +++A +  G  
Sbjct: 23  HATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGAH 82

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
               ++   M   G   N FA+GS ++   +MG S  G  +H  A+K  +  N F   ++
Sbjct: 83  PAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATAL 142

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           L+ YAK G    A R+F  +   +   WNA++ GY   G    A+ +   M  EG   D+
Sbjct: 143 LHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDE 202

Query: 247 YTFINALQGCSLVADFD--IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
            TF   L   ++V D    +  Q+HG I++      + ++NA I  Y +   +  + ++F
Sbjct: 203 ATFAALL---TVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIF 259

Query: 305 ERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLD 362
           + + D+ D+ISWN + G ++ +    +    F   +  SG +P+  +F+ ++  C +  D
Sbjct: 260 DEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRD 319

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNITTWNEL 419
              G  +  L    GF    +V ++LI M+ R      +E A+  FD++  K+  +WN +
Sbjct: 320 HG-GTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSM 378

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L+GY  +   AD L+ F  +    +  +   F   + +C      ++  QIHG +I++GF
Sbjct: 379 LTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGF 438

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +S  ++ SSLI  Y   G LD++ +    A++     W +MM      G      ++F+ 
Sbjct: 439 ASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQ 498

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCG 598
           ++E     D      ++ +C+  G       I +    + G    +   +  ID Y + G
Sbjct: 499 MLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAG 558

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSV 657
            +  A+   D      D +V+ TL+ A   HG +  A ++     L   +P Q +T+V +
Sbjct: 559 QLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVAS--HLLEAEPRQHSTYVLL 616

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +  S  G+     ++ K M ++ G+   P
Sbjct: 617 SNMYSGLGMWSDRAIVQKEMKNK-GLSKVP 645



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 246/527 (46%), Gaps = 22/527 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  +   L  +L  +  +    LGTQ+H   VK G  +++F    L+ MY+KCG      
Sbjct: 97  LAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDAC 156

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R+FD M ERN VSW  +V+  +++G+    ++++V+M+  GF+P+E    +++ V V+  
Sbjct: 157 RLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTV-VNDS 215

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMI 218
                + +H   +K        V  + +  Y++ G +A + R+F  I    D+  WNAM+
Sbjct: 216 TCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAML 275

Query: 219 GGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           G YA  G   EA+   +SM+   G+  D Y+F + +  C+   D   G  IHGL+ ++  
Sbjct: 276 GAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACAEHRDHG-GTVIHGLVSKNGF 334

Query: 278 ECSISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           E    + NALI MY + S    M+ A+K F+ +  KD +SWN++  G+S++         
Sbjct: 335 EGVTHVCNALIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRF 394

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
           F          +   FS  LR C  L  L LG Q+  L +  GF     V+SSLI+M+ +
Sbjct: 395 FRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSK 454

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A   F+     +   WN ++ GY  +     V   F  + E  V ++  TF  +
Sbjct: 455 SGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGL 514

Query: 455 VETCCRS----ENQQMVGQI---HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
           +  C  +    E  +++  +   +G  ++    +CG      I  Y   GQLD + E  +
Sbjct: 515 ITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACG------IDLYGRAGQLDKAKELID 568

Query: 508 GAE-RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP-DEYIL 552
                 D   W  ++ A    G+   A  +   L+EA  +    Y+L
Sbjct: 569 SMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVL 615


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 165/576 (28%), Positives = 291/576 (50%), Gaps = 5/576 (0%)

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +   P    S++  +A  G +  A+    +  S D    N +I G A  G    AL   +
Sbjct: 38  VRPKPGGTKSLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYA 97

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKS 294
           +ML  G   D++TF   L+ C+ +   D GR  H   IR  V  + +   N+L+  Y + 
Sbjct: 98  AMLAAGARPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARL 157

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL- 353
             +D A +VF+ M  +DV++WN++  G+  N   G  A +  + +       H    I+ 
Sbjct: 158 GLVDDAERVFDGMPARDVVTWNSMVDGYVSN-GLGTLALVCFREMHEALEVQHDGVGIIA 216

Query: 354 -LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
            L  C     L  G ++    +  G   +  V +S++ M+C+CG +  A  VF  +  + 
Sbjct: 217 ALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRT 276

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + TWN ++ GY  N    +    F  +   G +V   T   ++  C ++E+      +HG
Sbjct: 277 VVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHG 336

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            I +  F     + ++L++ Y   G++ +S +         + SW  M++A +++    E
Sbjct: 337 YITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYME 396

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+T+F  L+     PD + +  ++ +   +G  ++ + +H ++I+LG+     + +A++ 
Sbjct: 397 AITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMH 456

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YA+CGD+  +R  FD+   + DVI +NT+IM YA HG    A+E+F +MK   L+P+++
Sbjct: 457 MYARCGDVLSSREIFDK-MAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNES 515

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TFVSV++ACS  GL D+G   F SM   YGM P  + YGC+ D+L R G L++    IE 
Sbjct: 516 TFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIEN 575

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
           MP  P+  V+ SLL+  R   + ++ E+A+E++  L
Sbjct: 576 MPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQL 611



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 197/403 (48%), Gaps = 12/403 (2%)

Query: 63  GTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G   H   ++LG    D++  N+L+A Y++ G      RVFD M  R++V+W  +V   +
Sbjct: 127 GRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYV 186

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            NG   + L  + +M     + ++   + + +  C    A   G  +H + ++  +E + 
Sbjct: 187 SNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDV 246

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG S+L+ Y K GD+A+AE VF ++ S  V  WN MIGGYA      EA +    M  E
Sbjct: 247 KVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAE 306

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G  ++  T IN L  C+       GR +HG I R +    + +  AL++MY K   +  +
Sbjct: 307 GHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSS 366

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF +M  K ++SWN +   +   +   +  +LF   +     P++ T S ++      
Sbjct: 367 EKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAF--- 423

Query: 361 LDLDLGLQLQCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
             + LGL  QC  +H      G+ +   + +++++M+ RCG V  +  +FD ++ K++ +
Sbjct: 424 --VLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVIS 481

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           WN ++ GY  +      L+ F  +  +G+  N  TF  V+  C
Sbjct: 482 WNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 197/424 (46%), Gaps = 4/424 (0%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAER 201
           P+ F    V+K C  +GA + G + H  A+++ +   + + G S+L FYA+LG V  AER
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM--DKYTFINALQGCSLV 259
           VF  + + DV  WN+M+ GY   G G  AL     M  E + +  D    I AL  C L 
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREM-HEALEVQHDGVGIIAALAACCLE 224

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
           +    GR++H  +IR  +E  + +  +++DMY K   +  A  VF  M  + V++WN + 
Sbjct: 225 SALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
           GG++ N+ P +    F +    G +   VT   LL  C +      G  +        FL
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               + ++L+ M+ + G V+ +  VF  ++ K + +WN +++ Y +     + +  F ++
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
               +  +  T   VV         +   Q+H  II+ G+     I ++++  Y   G +
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +S E  +     D+ SW  M+      G    A+ +F  +   G +P+E    ++L +C
Sbjct: 465 LSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524

Query: 560 AAIG 563
           +  G
Sbjct: 525 SVSG 528



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 15/285 (5%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+     +S + G  VHG+I +  F   + L+  L+ MYSK G      +VF +M  + L
Sbjct: 319 LAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTL 378

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  +++A +    +   + +++D+      P+ F + +V+   V +G       +H +
Sbjct: 379 VSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSY 438

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +++   +N  +  ++++ YA+ GDV ++  +F  +++ DV  WN MI GYA  G G  A
Sbjct: 439 IIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSA 498

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSEVECSISI 283
           L + S M   G+  ++ TF++ L  CS+    D G       ++ +G+I +      I  
Sbjct: 499 LEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQ------IEH 552

Query: 284 VNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
              + D+  ++  +    +  E M  D     W +L    S N+N
Sbjct: 553 YGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTA-SRNRN 596


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/539 (30%), Positives = 273/539 (50%), Gaps = 40/539 (7%)

Query: 262 FDIGRQIHGLIIRSEVECSISIVNALIDMYI---KSSGMDYAFKVFERMADKDVISWNTL 318
           F  G QIH   I + +   I  ++ LI  +       G+D++  +F ++   ++  WNT+
Sbjct: 22  FKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTM 81

Query: 319 FGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
             G+S + NP +   L+   I  G + PN+ TF  LL  C +L  L+ G ++    +  G
Sbjct: 82  IRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHG 141

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
           F  +  V ++LI+++   G + +A ++FD    +++ ++N ++ GY         L  F 
Sbjct: 142 FESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFG 201

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT----------------GFSS 481
            +  SG+  +  TF  +   C       +  QIH  + K                  ++ 
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261

Query: 482 CGYI------------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
           CG I                   SS++  Y   G+++ + +  N     D+ SW AM+S 
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISG 321

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-FNT 582
               G   EA+ +F  +   G KPDE  L  +L++CA +GA+   K ++   I+ G FN 
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
              + +AV+D YAKCG I  A   F +   N     V+N++I   A HGL   A+ +F +
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           +    L+P + TFV V+ AC H GL+++G  LF+SM + YG++P  + YGC+VD+L R G
Sbjct: 442 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 501

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            LE+A  +++ MPF+ +  ++R+LLS CR HGN ++GE A +KLL +  ++ A +VLLS
Sbjct: 502 CLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLS 560



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 211/465 (45%), Gaps = 47/465 (10%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---F 95
           FL ++P     SL L E+ KS   G Q+H   +  G  + IF  + LI+ +S  G     
Sbjct: 5   FLLENP----SSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGL 60

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKV 154
                +F ++   NL  W  ++    ++      + +Y+ M   G  P N F    ++  
Sbjct: 61  DHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNS 120

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C  + + E G+ +H   +K   E + FV  ++++ Y+  G++  A  +F      D+  +
Sbjct: 121 CARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSY 180

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
           N MI GYA       AL +   M   GI  D++TF+     CS++ + ++G+QIH  + +
Sbjct: 181 NTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYK 240

Query: 275 S--EVECSISIVNALIDMYIK--------------------------------SSGMDYA 300
           +   ++ +I + +A++DMY K                                   ++ A
Sbjct: 241 NLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVA 300

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F  M ++DVISW  +  G+S+     +   LF +    G +P+ VT   +L  C +L
Sbjct: 301 RKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARL 360

Query: 361 LDLDLGLQLQCLALHCGFLDEENV-TSSLIYMFCRCGAVEMAHSVFDNVSYKNITT---W 416
              DLG +L    +  G  ++  + T++++ M+ +CG+++ A  +F  V  KN+ T   +
Sbjct: 361 GAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVG-KNMKTGFVF 419

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           N +++G   +      +  F  +  +G++ +  TF  V+  C  S
Sbjct: 420 NSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHS 464



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 127/594 (21%), Positives = 256/594 (43%), Gaps = 83/594 (13%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD---VAAAERVFYSISSDDVGCWNAMIGG 220
           G  IH   +   +    F    +++F++ LG    +  +  +F  I   ++  WN MI G
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 221 YAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           Y+      EA+ +  SM+ +GI   + +TF   L  C+ ++  + G ++H  II+   E 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + + NALI +Y     ++ A  +F+    +D++S+NT+  G++E   P     LF +  
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQ 204

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC---------------------LALHCGF 378
            SG  P+  TF  L   C  L + ++G Q+                       +   CG 
Sbjct: 205 NSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGL 264

Query: 379 LD-EENV------------TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           ++  E V             SS++  + RCG + +A  +F+++  +++ +W  ++SGY  
Sbjct: 265 INIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQ 324

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-FSSCGY 484
               ++ L+ F  +   G++ +  T   V+  C R     +  +++   I+ G F+    
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384

Query: 485 ICSSLIKSYVNFGQLDNSFE-FSNGAERLDMA-SWGAMMSALVHQGHNHEAVTIFHSLVE 542
           + ++++  Y   G +D++ E F    + +     + +M++ L   G    A+T+F  L+ 
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G KPDE     +L +C   G  +  K +                 ++ +AY       G
Sbjct: 445 TGLKPDEVTFVGVLCACGHSGLIEEGKKLF---------------ESMFNAY-------G 482

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
            +   +          Y  ++     +G + EA ++  KM     + +   + +++SAC 
Sbjct: 483 IKPQMEH---------YGCMVDLLGRYGCLEEAYDLVQKMP---FEANSVIWRALLSACR 530

Query: 663 HKGLVDKGCLLFK---SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
             G V  G +  +    M++Q+G +     Y  L ++L+     E+A+ V ++M
Sbjct: 531 THGNVKIGEIAGQKLLEMEAQHGAR-----YVLLSNILADANQWEEARQVRKVM 579



 Score = 39.3 bits (90), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 27/128 (21%), Positives = 57/128 (44%), Gaps = 3/128 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
           ++ D + L   LS    L +  LG +++   ++ G F  +  L   ++ MY+KCG     
Sbjct: 343 IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA 402

Query: 99  LRVFDEMAERNLVSWTL--IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           L +F  + +     +    +++   Q+G  +  + ++ ++ + G  P+E     V+  C 
Sbjct: 403 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462

Query: 157 SMGASEFG 164
             G  E G
Sbjct: 463 HSGLIEEG 470


>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/507 (30%), Positives = 262/507 (51%), Gaps = 3/507 (0%)

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C+     D G Q+H  II+     +  I  AL+DMY K   +  A KVF+ M+   V++W
Sbjct: 78  CTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTW 137

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
           N+L  G+ +   P    SLF + +  G  P   + S  L  C +L   DLG QL  ++L 
Sbjct: 138 NSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLK 197

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
             F     V + LI M+ +C  ++ +  VFD +  KN+ TW  ++SGY  N    + +  
Sbjct: 198 LRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMIL 257

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
              +    ++ NG T+  ++ +     +     QIH  II  G+ S  YI  +L+ +Y  
Sbjct: 258 MREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSE 317

Query: 496 F-GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G L++  +  +     D  SW A+++   + G   EA+  F  +       D +   +
Sbjct: 318 CCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTS 377

Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           I  +     A +  K IH  V K G+   + V + ++  YA+ G I+ ++M F    N +
Sbjct: 378 IFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSM-MNEH 436

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
           D+I +N+L+   A+HG   EA+++F+KM+   ++P   +F++V++ACSH GL+DKG   F
Sbjct: 437 DLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYF 496

Query: 675 KSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           K M +S+    P  + Y  LVD+  R G L +A+  IE +P +P  ++Y++LLS C IHG
Sbjct: 497 KLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHG 556

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
           NK++    ++KLL L P + A +++LS
Sbjct: 557 NKDIAIRTAKKLLELYPYDPATYIMLS 583



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/585 (22%), Positives = 260/585 (44%), Gaps = 36/585 (6%)

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           ++  V +  +G  P    +   + +C      +FG  +H   +K+    NP++  ++++ 
Sbjct: 53  IQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDM 112

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K   ++ A +VF  +S   V  WN+++ GY   GY   A+++   ML +GI    ++ 
Sbjct: 113 YGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSL 172

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
              L GCS +   D+G Q+H + ++     ++ +   LIDMY K   +  + +VF+ M +
Sbjct: 173 SGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLN 232

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           K+V +W ++  G++ N+ P +   L  + +    +PN +T++ LL         D   Q+
Sbjct: 233 KNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQI 292

Query: 370 QCLALHCGFLDEENVTSSLIYMFCR-CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
            C  +  G+     +  +L+  +   CG++E    V  N+   +  +WN +++G+     
Sbjct: 293 HCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGI 352

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
             + L+ F  +     +V+  TF  + +    +   +   QIHG + KTG++    + + 
Sbjct: 353 GEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNG 412

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G + +S    +     D+ SW +++S   + G   EA+ +F  +     KPD
Sbjct: 413 LVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKPD 472

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
                 +L +C+ +G     K +  F  KL  N+E+ V    ++ YA             
Sbjct: 473 NTSFLAVLTACSHVGLLD--KGLEYF--KLMRNSEL-VEPPKLEHYA------------- 514

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                       TL+  +   G + EA    + +    ++P  + + +++SAC   G  D
Sbjct: 515 ------------TLVDLFGRAGKLYEAEAFIESIP---IEPGISIYKALLSACLIHGNKD 559

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
                 K +   Y   P+   Y  L + L R+GY +DA  +  +M
Sbjct: 560 IAIRTAKKLLELYPYDPA--TYIMLSNALGRDGYWDDAASIRRLM 602



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 210/455 (46%), Gaps = 12/455 (2%)

Query: 15  SCHF-HATRKRIHRLCGNNQFCSDSFLRK--------DPIFLAKSLSLSENLKSRVLGTQ 65
           SCH+ H+    I  L   +      FL +         P  L K++S+         G Q
Sbjct: 30  SCHYTHSEDVSIKPLLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQ 89

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH  I+KLGF+ + ++   L+ MY KC       +VFDEM+  ++V+W  +V+  +Q G 
Sbjct: 90  VHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGY 149

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             M + ++++M   G  P  F++   +  C  +   + G  +H  +LK+R   N  VG  
Sbjct: 150 PLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTG 209

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K  ++  + RVF  + + +V  W +MI GYA      EA+ ++  ML   +  +
Sbjct: 210 LIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYARNQLPHEAMILMREMLHLNLKPN 269

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM--DYAFKV 303
             T+ + L   S    FD  +QIH  II    E +  I   L+  Y +  G   DY  KV
Sbjct: 270 GMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYR-KV 328

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
              +   D ISWN +  GF+      +    F +        +  TF+ + +  G    L
Sbjct: 329 CSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           + G Q+  L    G+    +V + L+ M+ R GA+  +  VF  ++  ++ +WN LLSG 
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            ++ C  + +  F  +  + ++ +  +F  V+  C
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTAC 483



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           Q+H  I+  G+ ++ ++   L+  YS+C G      +V   +   + +SW  +++     
Sbjct: 291 QIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNL 350

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
           G  +  L+ ++ M+   F  + F   S+ K      A E G  IH    K     N  V 
Sbjct: 351 GIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQ 410

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
             +++ YA+ G +  ++ VF  ++  D+  WN+++ G A+ G G EA+++   M    I 
Sbjct: 411 NGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIK 470

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
            D  +F+  L  CS V   D G +   L+  SE+
Sbjct: 471 PDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSEL 504



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 2/146 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+HG + K G+T ++ +QN L++MY++ G       VF  M E +L+SW  ++S    
Sbjct: 391 GKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAY 450

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G  +  + ++  M+     P+  +  +V+  C  +G  + G           + + P +
Sbjct: 451 HGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPPKL 510

Query: 183 G--CSVLNFYAKLGDVAAAERVFYSI 206
               ++++ + + G +  AE    SI
Sbjct: 511 EHYATLVDLFGRAGKLYEAEAFIESI 536


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/513 (30%), Positives = 273/513 (53%), Gaps = 2/513 (0%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           ++  LQ C    D   G  IH  IIR+  + ++ +   LI  Y+K      A KVF+RM 
Sbjct: 40  YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
           +++V+SW     G+++N +      +F +   +G R N  T+  +LR C  L  L+ G+Q
Sbjct: 100 ERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQ 159

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +        F+    V S+L+ +  +CG +E A  +F+ +S +++ +WN ++ GY     
Sbjct: 160 IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDF 219

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
           + D  + F ++   GV  +  T   V++   R+ N   V QIHG II+ GF S   +  S
Sbjct: 220 NDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGS 279

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQ-GHNHEAVTIFHSLVEAGEKP 547
           LI +Y     + ++        + D+ S+ A+M+    +  ++ EA+ +F  +     + 
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           D+    T+LN CA I +    + IH   IK   + +V   +A++D YAK G+I+ A  AF
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAF 399

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +     +VI + +LI  Y  HG   EA+ ++ KM+   L+P+  TF+S++ ACSH GL 
Sbjct: 400 YE-MKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLT 458

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
            +G   F +M ++Y + P  + Y C++D+ +R G LE+A ++I  M  +P+ +++ ++L 
Sbjct: 459 GEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILG 518

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C I+G+  LGE A+  LL + P+N A +V+L+
Sbjct: 519 ACSIYGHMSLGEVAATHLLRMDPENSANYVVLA 551



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 233/482 (48%), Gaps = 12/482 (2%)

Query: 54  SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
           +E+LK    G  +H HI++ GF +++ L   LI  Y K G      +VFD M ERN+VSW
Sbjct: 50  TEDLKQ---GCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSW 106

Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
           T  +S   +NG +   L ++  M   G   N+F  GSV++ C  +   E G  IH    K
Sbjct: 107 TAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQK 166

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
            R   N FV  ++++ ++K G++  A  +F ++S  DV  WNA+IGGYA   +  ++  +
Sbjct: 167 NRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRM 226

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
             SM+ EG+T D +T  + L+  S   +     QIHG+II+      I +  +LID Y K
Sbjct: 227 FYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAK 286

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFSI 352
           S GM  A  +++ M  KDVIS+  +  G++   +  + A  LF          + VTF  
Sbjct: 287 SEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCT 346

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L  C  +  L +G Q+  LA+      +    ++L+ M+ + G +E A   F  +  KN
Sbjct: 347 MLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKN 406

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ--- 469
           + +W  L++GY  +    + +  +  +   G++ N  TF  ++  C  S    + G+   
Sbjct: 407 VISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHS---GLTGEGWE 463

Query: 470 -IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQ 527
             +  I K          S +I  +   GQL+ ++        + + + WGA++ A    
Sbjct: 464 CFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIY 523

Query: 528 GH 529
           GH
Sbjct: 524 GH 525



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 223/455 (49%), Gaps = 2/455 (0%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           ++++C+     + G  IH   ++   + N  +   ++ FY K G+   A +VF  +   +
Sbjct: 43  ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A I GYA  G+  +AL V S M   G+  +++T+ + L+ C+ +   + G QIHG
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            I ++    ++ + +AL+D++ K   M+ A  +FE M+++DV+SWN + GG++       
Sbjct: 163 CIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDD 222

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           +  +F+  +  G  P+  T   +L+   +  +L    Q+  + +  GF    ++  SLI 
Sbjct: 223 SFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLID 282

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC-DADVLKTFCNIWESGVEVNGC 449
            + +   ++ A +++ ++  K++ ++  +++GY   C    + L  F ++    +E++  
Sbjct: 283 AYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDV 342

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           TF  ++  C    +  +  QIH   IK   S      ++L+  Y   G+++++       
Sbjct: 343 TFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEM 402

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRT 568
           +  ++ SW ++++     G+ HEA+ ++  +   G KP++    ++L +C+  G   +  
Sbjct: 403 KEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGW 462

Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           +  +  + K          S +ID +A+ G ++ A
Sbjct: 463 ECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEA 497



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 135/284 (47%), Gaps = 3/284 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   L  S    + +   Q+HG I++LGF + I L  +LI  Y+K         ++
Sbjct: 238 DCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALY 297

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
             M +++++S+T I++   +   +    L ++ DM+      ++    +++ VC  + + 
Sbjct: 298 KSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASL 357

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
             G  IH  A+K +   +   G ++++ YAK G++  A R FY +   +V  W ++I GY
Sbjct: 358 SIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGY 417

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHGLIIRSEVECS 280
              GYG EA+ +   M +EG+  +  TF++ L  CS       G +  + +I +  +   
Sbjct: 418 GKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPR 477

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFS 323
               + +ID++ +   ++ A+ +  +M  K   S W  + G  S
Sbjct: 478 AEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACS 521



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 11/197 (5%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           F+  D +     L++  ++ S  +G Q+H   +K   + D+   N L+ MY+K G     
Sbjct: 336 FMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDA 395

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            R F EM E+N++SWT +++   ++G     + +Y  M+  G  PN+    S++  C   
Sbjct: 396 TRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHS 455

Query: 159 GASEFGYSIHCFALKIR----IEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGC 213
           G +  G+   CF   I     + +     C +++ +A+ G +  A  +   ++   +   
Sbjct: 456 GLTGEGWE--CFNNMITKYNILPRAEHYSC-MIDLFARGGQLEEAYNMICKMNIKPNSSL 512

Query: 214 WNAMIGG---YAHCGYG 227
           W A++G    Y H   G
Sbjct: 513 WGAILGACSIYGHMSLG 529


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 302/640 (47%), Gaps = 65/640 (10%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM- 244
           +LN YAKLG ++ A  +F  + + DV  WN ++ GY        +L    SM   G +  
Sbjct: 97  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 156

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM-------------- 290
           + +T   A++ C  +    +  Q+  ++ + + +    +  AL+DM              
Sbjct: 157 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 216

Query: 291 -----------------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
                            Y+K+ G+D+A ++F+ M ++DV+SWN +    S++    +   
Sbjct: 217 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 276

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +       G R +  T++  L  C +L  L  G QL    +      +  V S+L+ ++ 
Sbjct: 277 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 336

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + G  + A  VF+++  +N   W  L+SG+    C  + ++ F  +    + ++      
Sbjct: 337 KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 396

Query: 454 VVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYICS------------ 487
           ++  CC   +  +  Q+H   +K+G              ++ C  + S            
Sbjct: 397 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 456

Query: 488 -----SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV- 541
                S+I +Y   G +  + EF +G    ++ +W AM+ A +  G   + + ++  ++ 
Sbjct: 457 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 516

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E   +PD     T+   CA +GA +    I    +K+G   +  VA+AVI  Y+KCG I 
Sbjct: 517 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 576

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD   N  D++ +N +I  Y+ HG+  +A+EIFD +     +P   ++V+V+S C
Sbjct: 577 EARKVFD-FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGC 635

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLV +G   F  M   + + P  + + C+VD+L R G+L +AK +I+ MP +P+  V
Sbjct: 636 SHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV 695

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           + +LLS C+IHGN EL E A++ +  L   +  +++L++K
Sbjct: 696 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 735



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 158/719 (21%), Positives = 289/719 (40%), Gaps = 101/719 (14%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV------------------------- 101
           HG +V +G  + +FLQN L+  Y  CG      R+                         
Sbjct: 47  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106

Query: 102 -------FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMK 153
                  F  M  R++ SW  ++S   Q+ ++ + L+ ++ M  +G   PN F +   MK
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--------- 204
            C ++G       +     K   + +  V  ++++ + + G V  A R+F          
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226

Query: 205 ----------------------SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
                                 S+   DV  WN M+   +  G   EAL++V  M  +G+
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T+ ++L  C+ ++    G+Q+H  +IR+       + +AL+++Y KS     A  
Sbjct: 287 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  + D++ ++W  L  GF +     ++  LF++        +    + L+  C   +D
Sbjct: 347 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 406

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC--------------------------- 395
           L LG QL  L L  G +    V++SLI M+ +C                           
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466

Query: 396 ----GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF-CNIWESGVEVNGCT 450
               G V  A   FD +S KN+ TWN +L  Y  +  + D L+ +   + E  V  +  T
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 526

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  + + C      ++  QI G  +K G      + +++I  Y   G++  + +  +   
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW AM++     G   +A+ IF  +++ G KPD      +L+ C+  G  Q  K 
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK- 645

Query: 571 IHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
            +  ++K   N    +   S ++D   + G +  A+   D         V+  L+ A   
Sbjct: 646 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 705

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           HG  +E  E+  K       P   +++ +    +  G  D    + K M  + G++ +P
Sbjct: 706 HG-NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK-GIKKNP 762



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 187/433 (43%), Gaps = 66/433 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + L+ +Y+K G F    
Sbjct: 286 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 345

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +RN V+WT+++S  +Q G F   ++++  M+      ++FA+ +++  C S  
Sbjct: 346 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 405

Query: 160 ASEFGYSIHCFALK-------------------------------IRIEKNPFVGCSVLN 188
               G  +H   LK                                  EK+     S++ 
Sbjct: 406 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 465

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKY 247
            Y+++G+VA A   F  +S  +V  WNAM+G Y   G   + L +   ML E  +  D  
Sbjct: 466 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWV 525

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  ++  +    S+ NA+I MY K   +  A KVF+ +
Sbjct: 526 TYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL 585

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             KD++SWN +  G+S++    Q   +F   +  G++P+++++  +L  C          
Sbjct: 586 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS--------- 636

Query: 368 QLQCLALHCGFLDE-----------ENVTSSLIYMFC------RCGAVEMAHSVFDNVSY 410
                  H G + E            N++  L +  C      R G +  A  + D++  
Sbjct: 637 -------HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPM 689

Query: 411 KNIT-TWNELLSG 422
           K     W  LLS 
Sbjct: 690 KPTAEVWGALLSA 702



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S+ ++R D +          +L +  LG Q+ G  VK+G   D  + N +I MYSKCG  
Sbjct: 516 SEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 575

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VFD +  +++VSW  +++   Q+G     ++++ D+   G  P+  +  +V+  C
Sbjct: 576 LEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGC 635

Query: 156 VSMGASEFG 164
              G  + G
Sbjct: 636 SHSGLVQEG 644



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L SC A GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR          +
Sbjct: 31  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 90

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMK--------------------LANLQ------- 648
           VI +N ++  YA  G +S+A+E+F +M                     L +L+       
Sbjct: 91  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 649 -----PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
                P+  T    M +C   G       L  +M  ++  Q   +    LVDM  R G +
Sbjct: 151 SGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGAV 209

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSG 728
           + A  +  +   +P+     S+L+G
Sbjct: 210 DLASRLF-VRIKEPTMFCRNSMLAG 233


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 164/640 (25%), Positives = 302/640 (47%), Gaps = 65/640 (10%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM- 244
           +LN YAKLG ++ A  +F  + + DV  WN ++ GY        +L    SM   G +  
Sbjct: 77  MLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWP 136

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM-------------- 290
           + +T   A++ C  +    +  Q+  ++ + + +    +  AL+DM              
Sbjct: 137 NAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLF 196

Query: 291 -----------------YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
                            Y+K+ G+D+A ++F+ M ++DV+SWN +    S++    +   
Sbjct: 197 VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALD 256

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           +       G R +  T++  L  C +L  L  G QL    +      +  V S+L+ ++ 
Sbjct: 257 MVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYA 316

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           + G  + A  VF+++  +N   W  L+SG+    C  + ++ F  +    + ++      
Sbjct: 317 KSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALAT 376

Query: 454 VVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYICS------------ 487
           ++  CC   +  +  Q+H   +K+G              ++ C  + S            
Sbjct: 377 LISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKD 436

Query: 488 -----SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV- 541
                S+I +Y   G +  + EF +G    ++ +W AM+ A +  G   + + ++  ++ 
Sbjct: 437 IVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLS 496

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           E   +PD     T+   CA +GA +    I    +K+G   +  VA+AVI  Y+KCG I 
Sbjct: 497 EEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRIL 556

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD   N  D++ +N +I  Y+ HG+  +A+EIFD +     +P   ++V+V+S C
Sbjct: 557 EARKVFD-FLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGC 615

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           SH GLV +G   F  M   + + P  + + C+VD+L R G+L +AK +I+ MP +P+  V
Sbjct: 616 SHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEV 675

Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           + +LLS C+IHGN EL E A++ +  L   +  +++L++K
Sbjct: 676 WGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAK 715



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 158/719 (21%), Positives = 289/719 (40%), Gaps = 101/719 (14%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV------------------------- 101
           HG +V +G  + +FLQN L+  Y  CG      R+                         
Sbjct: 27  HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86

Query: 102 -------FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMK 153
                  F  M  R++ SW  ++S   Q+ ++ + L+ ++ M  +G   PN F +   MK
Sbjct: 87  LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146

Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--------- 204
            C ++G       +     K   + +  V  ++++ + + G V  A R+F          
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206

Query: 205 ----------------------SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
                                 S+   DV  WN M+   +  G   EAL++V  M  +G+
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
            +D  T+ ++L  C+ ++    G+Q+H  +IR+       + +AL+++Y KS     A  
Sbjct: 267 RLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  + D++ ++W  L  GF +     ++  LF++        +    + L+  C   +D
Sbjct: 327 VFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC--------------------------- 395
           L LG QL  L L  G +    V++SLI M+ +C                           
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446

Query: 396 ----GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF-CNIWESGVEVNGCT 450
               G V  A   FD +S KN+ TWN +L  Y  +  + D L+ +   + E  V  +  T
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVT 506

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           +  + + C      ++  QI G  +K G      + +++I  Y   G++  + +  +   
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
             D+ SW AM++     G   +A+ IF  +++ G KPD      +L+ C+  G  Q  K 
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK- 625

Query: 571 IHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
            +  ++K   N    +   S ++D   + G +  A+   D         V+  L+ A   
Sbjct: 626 FYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKI 685

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           HG  +E  E+  K       P   +++ +    +  G  D    + K M  + G++ +P
Sbjct: 686 HG-NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDK-GIKKNP 742



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 187/433 (43%), Gaps = 66/433 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + L+ +Y+K G F    
Sbjct: 266 VRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAK 325

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+ + +RN V+WT+++S  +Q G F   ++++  M+      ++FA+ +++  C S  
Sbjct: 326 GVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRM 385

Query: 160 ASEFGYSIHCFALK-------------------------------IRIEKNPFVGCSVLN 188
               G  +H   LK                                  EK+     S++ 
Sbjct: 386 DLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMIT 445

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKY 247
            Y+++G+VA A   F  +S  +V  WNAM+G Y   G   + L +   ML E  +  D  
Sbjct: 446 AYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWV 505

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  ++  +    S+ NA+I MY K   +  A KVF+ +
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFL 565

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             KD++SWN +  G+S++    Q   +F   +  G++P+++++  +L  C          
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCS--------- 616

Query: 368 QLQCLALHCGFLDE-----------ENVTSSLIYMFC------RCGAVEMAHSVFDNVSY 410
                  H G + E            N++  L +  C      R G +  A  + D++  
Sbjct: 617 -------HSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPM 669

Query: 411 KNIT-TWNELLSG 422
           K     W  LLS 
Sbjct: 670 KPTAEVWGALLSA 682



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S+ ++R D +          +L +  LG Q+ G  VK+G   D  + N +I MYSKCG  
Sbjct: 496 SEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 555

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               +VFD +  +++VSW  +++   Q+G     ++++ D+   G  P+  +  +V+  C
Sbjct: 556 LEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGC 615

Query: 156 VSMGASEFG 164
              G  + G
Sbjct: 616 SHSGLVQEG 624



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 34/205 (16%)

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           L SC A GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR          +
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 70

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMK--------------------LANLQ------- 648
           VI +N ++  YA  G +S+A+E+F +M                     L +L+       
Sbjct: 71  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 649 -----PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
                P+  T    M +C   G       L  +M  ++  Q   +    LVDM  R G +
Sbjct: 131 SGDSWPNAFTLACAMKSCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGAV 189

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSG 728
           + A  +  +   +P+     S+L+G
Sbjct: 190 DLASRLF-VRIKEPTMFCRNSMLAG 213


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/517 (29%), Positives = 270/517 (52%), Gaps = 13/517 (2%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF-ERMADKD 311
           LQ C+   + + G+Q+H L+I      S   + +LI+MY K   M  A  VF +   +++
Sbjct: 18  LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           V ++N +  GF  N    +    + K  L G  P+  TF  ++R C +++++    ++  
Sbjct: 78  VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHG 134

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             L  G   +  V S+L+  + + G++E A  VF  +S +++  WN +++GY    C  +
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L+ F  +   GV  +  T   ++       +      +HG ++K G+ S   + ++LI 
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y     + ++          D+ SW +++S     G +   + +F  ++ +G  PD   
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE--------VYVASAVIDAYAKCGDIKGA 603
           + T+L +C+ + A    + IH ++I  G   +        + V++AV+D YAKCG +  A
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              FD S +  DV  +N +IM Y  HG   EA+ +F +M  A  +P++ T V V+SAC+H
Sbjct: 375 LKIFD-SMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNH 433

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G V  G L    M+S +G+ P+ + Y C++DML R G+LEDA  +++ MP Q +P V+R
Sbjct: 434 AGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWR 493

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LL  CR+HGN EL E A+ ++L L P++  ++VL+S
Sbjct: 494 ALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMS 530



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 211/405 (52%), Gaps = 12/405 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF-DEMAERNLVSWTLIVSAAI 121
           G Q+H  ++  GF+       +LI MYSKCG  G  + VF D   ERN+ ++  I+S  +
Sbjct: 30  GKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIISGFV 89

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG    G + Y  M+  G MP+++    V++ C  +   +    IH   LK+ +E + F
Sbjct: 90  SNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHGCLLKMGLELDVF 146

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG +++N Y K G +  A++VF  +S  DV  WNAMI GYA  G   EAL V   M  +G
Sbjct: 147 VGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKG 206

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +   ++T    L   +   D D G+ +HG++++   +  +S+ NALIDMY K   +  A 
Sbjct: 207 VAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDAL 266

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            +FE + +KD+ SWN++     +  +   T  LF K + SG  P+ VT + +L  C  L 
Sbjct: 267 IIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLA 326

Query: 362 DLDLGLQLQCLALHCGF-LDEEN-------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
            L  G ++    +  G   D+EN       V+++++ M+ +CG++  A  +FD++S K++
Sbjct: 327 ALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDV 386

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            +WN ++ GY  +    + L  F  + E+  + N  T   V+  C
Sbjct: 387 ASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSAC 431



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 20/273 (7%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VHG ++K+G+ + + + N LI MY KC + G  L +F+ + E+++ SW  I+S   Q
Sbjct: 230 GKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQ 289

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK---- 178
            G+ D  L+++  M  +G +P+   + +V+  C  + A   G  IH + +   + K    
Sbjct: 290 CGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDEN 349

Query: 179 ----NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
               N  V  +V++ YAK G +  A ++F S+S  DV  WN MI GY   GY  EAL + 
Sbjct: 350 GAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMF 409

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL------I 288
           S M       ++ T +  L  C+       G   HG +  +++E +  ++  +      I
Sbjct: 410 SQMCEAEFKPNEVTLVGVLSACN-----HAGFVSHGRLFLAQMESTFGVIPTIEHYTCVI 464

Query: 289 DMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           DM  ++  ++ A+++ ++M    + + W  L G
Sbjct: 465 DMLGRAGHLEDAYEIVQKMPIQANPVVWRALLG 497


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 250/498 (50%), Gaps = 34/498 (6%)

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           G  YA  VF  + + + + WNT+  G++ + +P     L+   I  G  PN  TF  LL+
Sbjct: 15  GFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLK 74

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY----- 410
            C K    + G Q+    L  G+  +  V +SLI M+ + G +E AH VFD  S+     
Sbjct: 75  SCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVS 134

Query: 411 --------------------------KNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
                                     K++ +WN ++SGY       + L+ F  + ++ V
Sbjct: 135 YTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  T   V+  C +S + ++  Q+H  I   GF S   I ++LI  Y   GQ++ +  
Sbjct: 195 RPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACG 254

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
              G    D+ SW  ++    H     EA+ +F  ++ +GE P++  + +IL +CA +GA
Sbjct: 255 LFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA 314

Query: 565 YQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
               + IH ++ K          + +++ID YAKCGDI+ A   F+   + + +  +N +
Sbjct: 315 IDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKS-LSSWNAM 373

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           I  +A HG  +   ++F +M+   ++P   TFV ++SACSH G +D G  +FKSM   Y 
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYD 433

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWAS 742
           + P  + YGC++D+L  +G  ++AK +I+ MP +P   ++ SLL  CR HGN EL E  +
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFA 493

Query: 743 EKLLLLLPKNDAAHVLLS 760
             L+ + P+N  ++VLLS
Sbjct: 494 RNLMKVEPENPGSYVLLS 511



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 35/401 (8%)

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
           F + + VF  + E N + W  ++     + +    LK+YV M + G +PN +    ++K 
Sbjct: 16  FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK---------------------- 192
           C    A E G  IH   LK+  E + +V  S+++ YA+                      
Sbjct: 76  CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135

Query: 193 ---------LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
                     G++ +A+ +F  I   DV  WNAMI GYA  G   EAL +   M+   + 
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D+ T +  L  C+     ++GRQ+H  I       ++ IVNALID+Y K   ++ A  +
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE ++ KDV+SWNTL GG++      +   LF + + SG  PN VT   +L  C  L  +
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315

Query: 364 DLGLQLQCLALHCGFLDEENVTS---SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           D+G  +  + +     D  N  S   SLI M+ +CG +E AH VF+++ +K++++WN ++
Sbjct: 316 DIGRWIH-VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 374

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            G+  +         F  + ++G+E +  TF  ++  C  S
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHS 415



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-------------- 91
           FL KS + S+  +    G Q+HGH++KLG+  D+++  +LI+MY++              
Sbjct: 71  FLLKSCAKSKAFEE---GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127

Query: 92  ------------CGYFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                        GY   G       +FDE+  +++VSW  ++S   + G +   L+++ 
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E  + +V+  C    + E G  +H +        N  +  ++++ Y+K G
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            V  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G + +  T ++ L 
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +   +V  + S+  +LIDMY K   ++ A +VF  M  K +
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +        LF +   +G  P+ +TF  LL  C     LDLG  +
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 138/292 (47%), Gaps = 4/292 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   LS     +S  LG QVH  I   GF +++ + N LI +YSKCG      
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETAC 253

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ ++ +++VSW  ++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLG 313

Query: 160 ASEFGYSIHCFALK--IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +   P +  S+++ YAK GD+ AA +VF S+    +  WNAM
Sbjct: 314 AIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 373

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-E 276
           I G+A  G      ++ S M   GI  D  TF+  L  CS     D+GR I   + +  +
Sbjct: 374 IFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYD 433

Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           +   +     +ID+   S     A ++ + M  + D + W +L      + N
Sbjct: 434 ITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 264/522 (50%), Gaps = 13/522 (2%)

Query: 245 DKYTF---INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYA 300
           D +TF   + A QG    A      Q+H   +R  +    +  + AL+  Y++   +  A
Sbjct: 70  DAFTFPPLLRAAQGPGTAA------QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDA 123

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           ++ F+ M  +DV +WN +  G   N    +   LF + ++ G   + VT S +L  C  L
Sbjct: 124 YRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLL 183

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            D  L L +   A+  G  DE  V +++I ++ + G +E    VFD +S +++ TWN ++
Sbjct: 184 GDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSII 243

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           SG+      A  ++ FC + +SGV  +  T   +     +  +      +H  +++ G+ 
Sbjct: 244 SGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWD 303

Query: 481 SCGYIC-SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF-H 538
               I  ++++  Y    +++ +    +     D  SW  +++  +  G   EA+ ++ H
Sbjct: 304 VGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDH 363

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
                G KP +    ++L + + +GA Q+   +H   IK G N +VYV + VID YAKCG
Sbjct: 364 MQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCG 423

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            +  A + F+Q+        +N +I     HG  ++A+ +F +M+   + P   TFVS++
Sbjct: 424 KLDEAMLLFEQT-PRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLL 482

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           +ACSH GLVD+G   F  M + YG++P    Y C+VDM  R G L+DA   I  MP +P 
Sbjct: 483 AACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPD 542

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ +LL  CRIHGN E+G+ AS+ L  L PKN   +VL+S
Sbjct: 543 SAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMS 584



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 216/476 (45%), Gaps = 27/476 (5%)

Query: 64  TQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
            Q+H   ++LG    D F    L+  Y + G      R FDEM  R++ +W  ++S   +
Sbjct: 88  AQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCR 147

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           N      + ++  M   G   +   V SV+ +CV +G      ++H +A+K  ++   FV
Sbjct: 148 NARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFV 207

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             ++++ Y KLG +    +VF  +SS D+  WN++I G+   G    A+ +   M   G+
Sbjct: 208 CNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGV 267

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAF 301
           + D  T ++     +   D   GR +H  ++R   +    I  NA++DMY K S ++ A 
Sbjct: 268 SPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQ 327

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKL 360
           ++F+ M  +D +SWNTL  G+ +N    +   ++ H     G +P   TF  +L     L
Sbjct: 328 RMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHL 387

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L  G ++  L++  G   +  V + +I ++ +CG ++ A  +F+    ++   WN ++
Sbjct: 388 GALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVI 447

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG-- 478
           SG   +   A  L  F  + + G+  +  TF  ++  C            H  ++  G  
Sbjct: 448 SGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACS-----------HAGLVDQGRN 496

Query: 479 ---FSSCGYICSSLIKSYV-------NFGQLDNSFEF-SNGAERLDMASWGAMMSA 523
                   Y    + K Y          GQLD++F+F  N   + D A WGA++ A
Sbjct: 497 FFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGA 552



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 5/386 (1%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + ++  L +   L  R L   +H + VK G  +++F+ N +I +Y K G      +VF
Sbjct: 169 DAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVF 228

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D M+ R+LV+W  I+S   Q G+    ++M+  M+ +G  P+   + S+       G   
Sbjct: 229 DGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDIC 288

Query: 163 FGYSIHCFALKIRIEKNPFV-GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
            G S+HC+ ++   +    + G ++++ YAKL  + AA+R+F S+   D   WN +I GY
Sbjct: 289 GGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGY 348

Query: 222 AHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
              G   EA++V   M   EG+   + TF++ L   S +     G ++H L I++ +   
Sbjct: 349 MQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLD 408

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +   +ID+Y K   +D A  +FE+   +    WN +  G   + +  +  SLF +   
Sbjct: 409 VYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQ 468

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G  P+HVTF  LL  C     +D G      +    G        + ++ MF R G ++
Sbjct: 469 EGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLD 528

Query: 400 MAHSVFDNVSYK-NITTWNELLSGYC 424
            A     N+  K +   W  LL G C
Sbjct: 529 DAFDFIRNMPIKPDSAIWGALL-GAC 553


>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 730

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 266/538 (49%), Gaps = 49/538 (9%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G+Q+H LII    E    IV  L+  Y     +  A  + E       + WN L   +  
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVR 171

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ------CLALHCGF 378
           N   G+  S + +    G RP+  T+  +L+ CG+ LD+  G +L       CL  +   
Sbjct: 172 NGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNL-- 229

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                V +SL+ M+ + G +  A  +F+N+  ++  +WN ++SGY       +  + F  
Sbjct: 230 ----FVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGK 285

Query: 439 IWESGVEVNGCTFFYVVETCCRSEN---------------------QQMVG--------- 468
           +   G+E+N  T+  +   C +S N                       ++G         
Sbjct: 286 MRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGA 345

Query: 469 -----QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
                +IHG+ I++ +     + ++LI  Y     L +++         ++ +W +M+S 
Sbjct: 346 IKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSG 405

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNT 582
             H   + EA  +F  ++ +G +P+   + +IL  CA +   Q  K  H ++++  GF  
Sbjct: 406 YTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKD 465

Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
            + + ++++D YA+ G +  A+  FD S +  D + Y +LI  Y   G   EA+++FD+M
Sbjct: 466 YLLLWNSLVDMYARSGKVLEAKRLFD-SISRRDEVTYTSLIAGYGIQGEGREALKLFDEM 524

Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
           K  +++P   T V+V+SACSH GLV +G  LF+ M S YG+ P  + + C+VD+  R G 
Sbjct: 525 KKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGL 584

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L  AK +I  MP++PS  ++ +LL  CRIHGN E+GEWA+EKLL + P+N   +VL++
Sbjct: 585 LHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIA 642



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 249/569 (43%), Gaps = 53/569 (9%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           NLKS   G Q+H  I+ LGF     +   L+  Y+          + +     + + W L
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S+ ++NG     L  Y  M   G  P++F   SV+K C       FG  +H       
Sbjct: 165 LISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASC 224

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--------YG 227
           +  N FV  S+++ YAK G+++ A  +F ++   D   WN MI GYA  G        +G
Sbjct: 225 LGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFG 284

Query: 228 F---------------------------EALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
                                       EAL ++S M   GI MD    I  L  CS + 
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
              +GR+IHG  IRS  +   ++ NALI MY +   + +A+ +F+    K++I+WN++  
Sbjct: 345 AIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLS 404

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFL 379
           G++      + + LF + +LSG  PN+VT + +L  C ++ +L  G +  C  L   GF 
Sbjct: 405 GYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFK 464

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
           D   + +SL+ M+ R G V  A  +FD++S ++  T+  L++GY       + LK F  +
Sbjct: 465 DYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEM 524

Query: 440 WESGVEVNGCTFFYVVETCCRS-------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
            +  ++ +  T   V+  C  S       +  +++   +G I +    +C      ++  
Sbjct: 525 KKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFAC------MVDL 578

Query: 493 YVNFGQLDNSFEF-SNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEY 550
           +   G L  + E  +    R   A W  ++ A    G+          L+E   E    Y
Sbjct: 579 FGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYY 638

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +L  I N  AA G + +   +  ++  LG
Sbjct: 639 VL--IANMYAAAGCWSKLAKVRTYMRDLG 665



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 220/506 (43%), Gaps = 41/506 (8%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H   + +  E++P +   ++ FY     +A A  +  + +      WN +I  Y  
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVR 171

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G   EAL+    M  +GI  DK+T+ + L+ C    D   G+++H  I  S +  ++ +
Sbjct: 172 NGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFV 231

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            N+L+ MY K+  +  A  +FE M ++D +SWNT+  G++      +   LF K  + G 
Sbjct: 232 HNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGI 291

Query: 344 RPNHVTFSIL-----------------------------------LRQCGKLLDLDLGLQ 368
             N +T++ +                                   L  C  +  + LG +
Sbjct: 292 ELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGRE 351

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           +   A+   +   +NV ++LI M+ RC  +  A+++F +   KNI TWN +LSGY     
Sbjct: 352 IHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDR 411

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII-KTGFSSCGYICS 487
             +    F  +  SG+E N  T   ++  C R  N Q   + H  I+ + GF     + +
Sbjct: 412 SEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWN 471

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL+  Y   G++  +    +   R D  ++ ++++    QG   EA+ +F  + +   KP
Sbjct: 472 SLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKP 531

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           D   +  +L++C+  G    T+ I  F +     G    +   + ++D + + G +  A+
Sbjct: 532 DHVTMVAVLSACSHSGLV--TEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAK 589

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHG 630
               +        ++ TL+ A   HG
Sbjct: 590 EMITRMPYRPSSAMWATLLGACRIHG 615



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 174/410 (42%), Gaps = 39/410 (9%)

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L  G QL  L +  GF     +   L+  +     +  AH++ +N +  +   WN L
Sbjct: 106 LKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLL 165

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y  N    + L  +  +   G+  +  T+  V++ C    +     ++H +I  +  
Sbjct: 166 ISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCL 225

Query: 480 SSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
               ++ +SL+  Y   G+L  +   F N  ER D+ SW  M+S    +G   EA  +F 
Sbjct: 226 GWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDV-SWNTMISGYASKGMWKEAFELFG 284

Query: 539 SLVEAGEKPDEYILGTI-----------------------------------LNSCAAIG 563
            +   G + +     TI                                   L +C+ IG
Sbjct: 285 KMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIG 344

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A +  + IH   I+  ++    V +A+I  Y++C  ++ A   F QS  + ++I +N+++
Sbjct: 345 AIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLF-QSTRTKNIITWNSML 403

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             Y H     EA  +F +M L+ ++P+  T  S++  C+    +  G      +  + G 
Sbjct: 404 SGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGF 463

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           +     +  LVDM +R+G + +AK + + +  +   T Y SL++G  I G
Sbjct: 464 KDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVT-YTSLIAGYGIQG 512


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/630 (27%), Positives = 295/630 (46%), Gaps = 53/630 (8%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI-------GGYAHCG---- 225
           E N      ++N YAK G ++ AE +F  +   DV  WN ++       G +  CG    
Sbjct: 84  EPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGC 143

Query: 226 --YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                + L +     F G    +   ++    C  V   D   ++   I R  + C    
Sbjct: 144 RELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYV---DFASRLFSQIERPTIFCR--- 197

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            N+++  Y K  G+D+A + FE MA++DV+SWN +    S++    +   L  +    G 
Sbjct: 198 -NSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGV 256

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           R +  T++  L  C +L  L  G QL    +      +  V S+LI ++ +CG+ + A  
Sbjct: 257 RLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 316

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VF+++  +N  +W  L+ G     C +  ++ F  +    + ++      ++  C    +
Sbjct: 317 VFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMD 376

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAER----------- 511
             +  Q+H   +K+G +    + +SLI  Y   G L N+ F FS+ +ER           
Sbjct: 377 LCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITA 436

Query: 512 -------------------LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYI 551
                               +  +W AM+ A +  G   + + ++ +++   +  PD   
Sbjct: 437 YSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVT 496

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
             T+   CA IGA +    I    +K G    V VA+A I  Y+KCG I  A+  FD   
Sbjct: 497 YVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDL-L 555

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           N  DV+ +N +I  Y+ HG+  +A + FD M     +P   ++V+V+S CSH GLV +G 
Sbjct: 556 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 615

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
           L F  M   +G+ P  + + C+VD+L R G+L +AK +I+ MP +P+  V+ +LLS C+I
Sbjct: 616 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKI 675

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           HGN EL E A++ +  L   +  +++LL+K
Sbjct: 676 HGNDELAELAAKHVFELDSPDSGSYMLLAK 705



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 156/696 (22%), Positives = 280/696 (40%), Gaps = 79/696 (11%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD-EMAERNLVSWTLIVSAAIQNG 124
           +HG +V +G  + +FLQN L+  Y  CG      R+   ++ E N+++  ++++   + G
Sbjct: 42  LHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQG 101

Query: 125 EFDMGLKMYVDMKT------NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
                 +++  M        N  M +          C ++G  E    +     K     
Sbjct: 102 SLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLLGLFWKFDFWG 161

Query: 179 NP---------FVGCSVLNF----------------------YAKLGDVAAAERVFYSIS 207
           +P         FV C  ++F                      YAKL  +  A   F  ++
Sbjct: 162 DPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMA 221

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
             DV  WN MI   +  G   EAL +V  M  +G+ +D  T+ ++L  C+ +     G+Q
Sbjct: 222 ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 281

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           +H  +IRS  +    + +ALI++Y K      A +VF  + D++ +SW  L GG  + + 
Sbjct: 282 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 341

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS 387
             ++  LF++        +    + L+  C   +DL LG QL  L L  G      V++S
Sbjct: 342 FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS 401

Query: 388 LIYMFCRCGAVEMAHSV-------------------------------FDNVSYKNITTW 416
           LI ++ +CG ++ A  V                               FD ++ +N  TW
Sbjct: 402 LISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITW 461

Query: 417 NELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           N +L  Y  +  + D LK +  +  +  V  +  T+  +   C      ++  QI G  +
Sbjct: 462 NAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTV 521

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           K G      + ++ I  Y   G++  +   F+  NG    D+ SW AM++     G   +
Sbjct: 522 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK---DVVSWNAMITGYSQHGMGKQ 578

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVI 591
           A   F  ++  G KPD      +L+ C+  G  Q  K     + ++ G +  +   S ++
Sbjct: 579 AAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMV 638

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D   + G +  A+   D+        V+  L+ A   HG   E  E+  K       P  
Sbjct: 639 DLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHG-NDELAELAAKHVFELDSPDS 697

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
            +++ +    S  G  D    + K M  + G++ +P
Sbjct: 698 GSYMLLAKIYSDAGKSDDSAQVRKLMRDK-GIKKNP 732



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 192/417 (46%), Gaps = 34/417 (8%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D      SL+    L S   G Q+H  +++     D ++ + LI +Y+KCG F    
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF+ + +RN VSWT+++  ++Q   F   ++++  M+      ++FA+ +++  C +  
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 375

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG------- 212
               G  +H   LK    +   V  S+++ YAK GD+  AE VF S+S  D+        
Sbjct: 376 DLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMIT 435

Query: 213 ------------------------CWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
                                    WNAM+G Y   G   + L + S+ML +  +T D  
Sbjct: 436 AYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWV 495

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T++   +GC+ +    +G QI G  +++ +  ++S+ NA I MY K   +  A K+F+ +
Sbjct: 496 TYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 555

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG- 366
             KDV+SWN +  G+S++    Q A  F   +  G++P+++++  +L  C     +  G 
Sbjct: 556 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 615

Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
           L    +    G        S ++ +  R G +  A  + D +  K     W  LLS 
Sbjct: 616 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSA 672



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L   L SC + GA    +++H  ++ +G  + V++ + ++ AY  CG +  AR       
Sbjct: 23  LADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADI 82

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG--LVDK 669
              +VI +N ++  YA  G +S+A E+FD+M   ++    A++ ++MS  S      +  
Sbjct: 83  KEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDV----ASWNTLMSDTSRPAGSWMSC 138

Query: 670 GCLLFKSMDSQ-------YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           G L  + +  Q       +     PD    LVDM  R GY++ A  +   +     PT++
Sbjct: 139 GALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI---ERPTIF 195

Query: 723 --RSLLSG 728
              S+L+G
Sbjct: 196 CRNSMLAG 203


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 286/552 (51%), Gaps = 20/552 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           ++  LQ C+        + IH  II++     ++++ +L+++Y K   M  A K+F+ + 
Sbjct: 77  YLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLH 136

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
            ++V++W  L  G+ +N  P     +F   + SG+ P++ T  I L  C  +  + LG Q
Sbjct: 137 RRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQ 196

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
           L    +      + ++ ++L  ++ + G+++ + +VF ++  KN+ +W  ++S    N  
Sbjct: 197 LHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGK 256

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
            A  L+ F  +    ++ N  T   V+  CC +    +   +H   IK G+     I +S
Sbjct: 257 AAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNS 316

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH-----------QGHNHEAVTIF 537
           ++  Y+  G +D +    +     ++ +W AM+S               Q    EA++IF
Sbjct: 317 IMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIF 376

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             L   G+KPD + L ++L  C+ + A  + + +H   IK G+ ++V V +A+++ Y+KC
Sbjct: 377 LELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKC 436

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G I  A  AF +  ++  +I + T+I   A HG   +A+++F+ M+LA ++P+Q TFV V
Sbjct: 437 GSIGKASKAFVE-MSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGV 495

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           ++AC H G+VD+    F+ M  +Y ++P  D YGCL+ M  +   L++A  +I  M F+P
Sbjct: 496 LAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEP 555

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL-----SKRKRQ---REGN 769
           S  ++  L++GCR  G +ELG +A+E+LL L  K+   +V L     S ++ Q   R   
Sbjct: 556 SEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRK 615

Query: 770 LLDHEGVCNVND 781
           L+  E +   ND
Sbjct: 616 LMKEEKLGKFND 627



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 214/407 (52%), Gaps = 11/407 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H HI+K G   D+ +  +L+ +Y+KCG  G   ++FD +  RN+V+WT +++  +QN +
Sbjct: 96  IHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQ 155

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
            ++ + ++ DM  +G +P+ + +G  +  C ++ + + G  +H F +K +++ +P +G +
Sbjct: 156 PNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNA 215

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           + + Y+KLG + ++  VF SI   +V  W A+I      G     L   + ML E I  +
Sbjct: 216 LCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPN 275

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           ++T    L  C +     +GR +H L I+   + ++ I N+++ +Y+K   MD A  +F 
Sbjct: 276 EFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFH 335

Query: 306 RMADKDVISWNTLFGG-----------FSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
           +M   ++++WN +  G           FS  ++  +  S+F +   +G +P+  T S +L
Sbjct: 336 KMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVL 395

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C +L  L  G QL    +  G+L +  V ++L+ M+ +CG++  A   F  +S + + 
Sbjct: 396 TVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLI 455

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +W  +++G   +      L+ F ++  +GV  N  TF  V+  CC S
Sbjct: 456 SWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHS 502



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 198/420 (47%), Gaps = 11/420 (2%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C    +      IH   +K    K+  V  S++N YAK G +  A ++F S+   +
Sbjct: 80  LLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRN 139

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W A++ GY        A++V   ML  G     YT   AL  CS +    +G+Q+H 
Sbjct: 140 VVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHA 199

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +I+ +++   SI NAL  +Y K   +D +  VF+ + +K+VISW  +     EN     
Sbjct: 200 FVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAM 259

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F++ +L   +PN  T + +L  C   L L LG  +  L++  G+     +T+S++Y
Sbjct: 260 GLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMY 319

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC---------FNCCDA--DVLKTFCNI 439
           ++ +CG ++ A  +F  +   N+ TWN ++SG+          F+   +  + L  F  +
Sbjct: 320 LYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLEL 379

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             +G + +  T   V+  C R        Q+H   IK+G+ S   + ++L+  Y   G +
Sbjct: 380 NRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSI 439

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
             + +         + SW  M++ L   GH+ +A+ +F  +  AG +P++     +L +C
Sbjct: 440 GKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAAC 499



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 11/307 (3%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H  ++K     D  + N L ++YSK G     + VF  + E+N++SWT ++SA  
Sbjct: 193 LGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACG 252

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG+  MGL+ + +M      PNEF + +V+ +C    A   G  +H  ++K+  + N  
Sbjct: 253 ENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLR 312

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFEA 230
           +  S++  Y K G +  A+ +F+ + S ++  WNAMI G+A               G EA
Sbjct: 313 ITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEA 372

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L++   +   G   D +T  + L  CS ++    G Q+H   I+S     + +  AL++M
Sbjct: 373 LSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNM 432

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
           Y K   +  A K F  M+ + +ISW T+  G +++ +  Q   LF    L+G RPN +TF
Sbjct: 433 YSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITF 492

Query: 351 SILLRQC 357
             +L  C
Sbjct: 493 VGVLAAC 499



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 15/275 (5%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           VLG  VH   +KLG+  ++ + N+++ +Y KCG+      +F +M   NLV+W  ++S  
Sbjct: 293 VLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGH 352

Query: 121 IQNGEFDM-----------GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
            Q  +               L +++++   G  P+ F + SV+ VC  + A   G  +H 
Sbjct: 353 AQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHA 412

Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
             +K     +  VG +++N Y+K G +  A + F  +S+  +  W  MI G A  G+  +
Sbjct: 413 QTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQ 472

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGC--SLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
           AL +   M   G+  ++ TF+  L  C  S + D  +G     +     ++  +     L
Sbjct: 473 ALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGY-FEMMQKEYRIKPVMDHYGCL 531

Query: 288 IDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           I M++K   +D AF +  +M  +     W+ L  G
Sbjct: 532 IAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAG 566



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 63/119 (52%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D   L+  L++   L +   G Q+H   +K G+ +D+ +   L+ MYSKCG  G   +
Sbjct: 385 KPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASK 444

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            F EM+ R L+SWT +++   Q+G  +  L+++ DM+  G  PN+     V+  C   G
Sbjct: 445 AFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSG 503


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 197/737 (26%), Positives = 319/737 (43%), Gaps = 146/737 (19%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           R+ R+C  N   + +  R+       S S++ N K RV                DI   N
Sbjct: 14  RVRRVCTINFGHTSTSTRR-------SESVTNNNKPRVKDP-------------DILKWN 53

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
             I+ + + G+    L VF+ M  R+ VS+  ++S  ++N +F++   ++  M       
Sbjct: 54  KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF- 112

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
                        S      GY  +C                      +LGD   A R+F
Sbjct: 113 -------------SWNVMLTGYVRNC----------------------RLGD---ARRLF 134

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   DV  WN+++ GYA  GY  EA  V  +M                          
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM-------------------------- 168

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
                         + SIS  N L+  Y+ +  ++ A  +FE  +D D+ISWN L GGF 
Sbjct: 169 ------------PEKNSISW-NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
             K  G    LF K       P     S                                
Sbjct: 216 RKKKLGDARWLFDKM------PVRDAISW------------------------------- 238

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             +++I  + + G +  A  +FD    +++ TW  ++SGY  N    D  KTF   ++  
Sbjct: 239 --NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM-LDEAKTF---FDEM 292

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            E N  ++  ++    +++   +  ++  ++     SS     +++I  Y   G +  + 
Sbjct: 293 PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIGDIAQAR 348

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +F +   + D  SW A+++     GH  EA+ +F  + + GE  +    G  L++CA I 
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A +  K IH   +K+G+ T  +V +A++  Y KCG I  A   F +     DV+ +NT++
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF-EGIEEKDVVSWNTML 467

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             YA HG   +A+ +F+ MK A ++P + T V V+SACSH GL+D+G   F SM   YG+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P+   Y C++D+L R G LE+A+ +I  MPFQP    + +LL   RIHGN ELGE A+E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 744 KLLLLLPKNDAAHVLLS 760
            +  + P+N   +VLLS
Sbjct: 588 MVFKMEPQNSGMYVLLS 604



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 4/286 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +I  Y + G      + FD M +R+ VSW  I++   Q+G ++  L M+V++K +G  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            N    G  +  C  + A E G  IH  A+K+      FVG ++L  Y K G +  A   
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  I   DV  WN M+ GYA  G+G +AL V  SM   G+  D+ T +  L  CS     
Sbjct: 452 FEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511

Query: 263 DIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           D G +  + +     V  +      +ID+  ++  ++ A  +   M       SW  L G
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571

Query: 321 G--FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 N   G+ A+     +   +   +V  S L    G+ +D D
Sbjct: 572 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDAD 617



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 17/90 (18%)

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           + GL+D G   F  M+ +Y + P+   Y C++D+L R   LE+                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
            +LL   RIHGN ELGE A++    + P+N
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQN 848


>gi|302775788|ref|XP_002971311.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
 gi|300161293|gb|EFJ27909.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
          Length = 604

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/595 (25%), Positives = 304/595 (51%), Gaps = 8/595 (1%)

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           ++ I+++ ++G  ++  Y K G V  A  VF  I   +V  W  ++      G     L 
Sbjct: 9   RLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLE 68

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV---ECSISIVNALID 289
           +   ML EGI  D+  ++  L+ CS +   + GRQ+  L++           +++ +L++
Sbjct: 69  LFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSLDAAVLTSLLN 128

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASLFHKFILSGSRPNHV 348
           +Y     ++ A +VFE   +KD++ WN++   +++++  G QT   F K +L G   N V
Sbjct: 129 LYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVV 188

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +F+ ++  C +    + G  +       G + +  + ++L+ M+ +CG +  A  +F  V
Sbjct: 189 SFTCVVGACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRV 248

Query: 409 SYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
             K ++ +WN +L+ +        VL+ F  +   G++ +G T   V+  CC ++  ++V
Sbjct: 249 DVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQALRIV 308

Query: 468 GQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             I+  + + G  S   ++ ++L+ S  + G+L ++        R + ASW  M++  V 
Sbjct: 309 EHIYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQ 368

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G + +A+ + + +   G KP+      I+++C+++      K++H  +       +  +
Sbjct: 369 HGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVL 428

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A++  YA C  ++ +R  F +S +  D + +N +I AYA  G   + +E F  M    
Sbjct: 429 GTAIVSMYANCDSLEDSRRVF-ESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQG 487

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           L+P   TF+ V+ ACSH G V++ C LF S+   + + P+   Y C++D+L R G+LE+A
Sbjct: 488 LKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLLPAIQHYVCVIDLLGRAGWLENA 547

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP-KNDAAHVLLS 760
             +I  MP+QP+   + +LL  C ++G+ + G  A+ ++  +   ++ A++VLLS
Sbjct: 548 HELINRMPYQPNSLAWSTLLGACGMYGDTDRGTHAAGQVTTIEQGQHGASYVLLS 602



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/577 (25%), Positives = 263/577 (45%), Gaps = 19/577 (3%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  + +LG   D +L N L+ MY KCGY    + VF  + +RN+ SWT+++ A  +NG  
Sbjct: 4   HRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLS 63

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-------CFALKIRIEKN 179
           ++ L+++  M   G  P+  A   V+K C  +   E G  +        CF   +    +
Sbjct: 64  ELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSL----D 119

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEALNVVSSML 238
             V  S+LN YA  G +  A RVF S    D+ CWN+M+  YA H   G + L     ML
Sbjct: 120 AAVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKML 179

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            EG+  +  +F   +  CS     + G  IH  I  S +     +  AL++MY K   + 
Sbjct: 180 LEGVAANVVSFTCVVGACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGRLG 239

Query: 299 YAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            A+++F+R+  K  ++SWN++    ++  +  +   +F    L G +P+ VT   +L  C
Sbjct: 240 SAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGC 299

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
                L +   +       G +  +  + ++L+   C CG +  A S+F  ++  N  +W
Sbjct: 300 CSTQALRIVEHIYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYRLNRWNAASW 359

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++GY  +  D   L     +   G++ N  TF  +V+ C           +H  I  
Sbjct: 360 NTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISA 419

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           +       + ++++  Y N   L++S       +  D  SW A+++A   QGH ++ +  
Sbjct: 420 SKVGLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLES 479

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDA 593
           F  ++  G KPD      +L++C+  G+ ++   +   + +   L    + YV   VID 
Sbjct: 480 FRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLLPAIQHYV--CVIDL 537

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
             + G ++ A    ++     + + ++TL+ A   +G
Sbjct: 538 LGRAGWLENAHELINRMPYQPNSLAWSTLLGACGMYG 574



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 221/460 (48%), Gaps = 10/460 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R  H  + R  ++    + N L+ MY K   ++ A  VF+R+ D++V SW  L    +EN
Sbjct: 1   RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTEN 60

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD---EE 382
                T  LF + +L G RP+ V +  +L+ C +L  L+ G Q++ L +         + 
Sbjct: 61  GLSELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSGSCFPSSLDA 120

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADVLKTFCNIWE 441
            V +SL+ ++  CG++E A  VF++   K++  WN +L+ Y          L+ F  +  
Sbjct: 121 AVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLL 180

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV  N  +F  VV  C R E  +    IH  I  +G  +  ++ ++L+  Y   G+L +
Sbjct: 181 EGVAANVVSFTCVVGACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGRLGS 240

Query: 502 SFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++E F     ++ + SW ++++A   +    + + IF  L   G KP    L ++L  C 
Sbjct: 241 AWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCC 300

Query: 561 AIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +  A +  + I+  V + G  + ++++ +A++ +   CG +  A   F +  N  +   +
Sbjct: 301 STQALRIVEHIYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYR-LNRWNAASW 359

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD- 678
           NT+I  Y  HG   +A+ +  +M L  ++P+  TF+ ++ ACS   ++     + + +  
Sbjct: 360 NTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISA 419

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           S+ G+         +V M +    LED++ V E +  + +
Sbjct: 420 SKVGLDTVLGT--AIVSMYANCDSLEDSRRVFESLDLRDT 457



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 175/378 (46%), Gaps = 15/378 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM-AERNLVSWTLIVSAAI 121
           GT +H  I   G   D FL   L+ MYSKCG  G    +F  +  + +LVSW  I++A  
Sbjct: 206 GTVIHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHA 265

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-CFALKIRIEKNP 180
           Q  +    L+++  ++  G  P+   + SV+  C S  A      I+   A +  I  + 
Sbjct: 266 QRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQALRIVEHIYERVAQEGEISHDL 325

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+G +++      G +A AE +FY ++  +   WN MI GY   G+  +AL+++  M  E
Sbjct: 326 FLGTALMTSLCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLE 385

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  +  TF+  +  CS +A     + +H  I  S+V     +  A++ MY     ++ +
Sbjct: 386 GIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVLGTAIVSMYANCDSLEDS 445

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VFE +  +D +SWN +   ++E  +  Q    F   I  G +P++ TF  +L  C   
Sbjct: 446 RRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHA 505

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFDNVSYK-NI 413
             ++     Q   L      + N+  ++ +  C      R G +E AH + + + Y+ N 
Sbjct: 506 GSVE-----QACDLFNSITRDHNLLPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNS 560

Query: 414 TTWNELLSGYCFNCCDAD 431
             W+ LL G C    D D
Sbjct: 561 LAWSTLL-GACGMYGDTD 577


>gi|302788326|ref|XP_002975932.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
 gi|300156208|gb|EFJ22837.1| hypothetical protein SELMODRAFT_51678 [Selaginella moellendorffii]
          Length = 570

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 166/578 (28%), Positives = 296/578 (51%), Gaps = 20/578 (3%)

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y K G V  A  +F S+      CWN +IG YA  G G E+L +   M  EG   D++TF
Sbjct: 1   YGKCGSVDRARSLFESLPRKSSLCWNFVIGAYAGNGRGEESLYLFRRMALEGERPDRHTF 60

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           +  L  C+  A    G  IH  I  S +E  + + N+L+ +Y +   +D A  VF+ + +
Sbjct: 61  VRVLGACTNTAQ---GTAIHRHISSSGLEFDLMLQNSLVALYGRYGRVDLARSVFQSIPE 117

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV-TFSILLRQCGKLLDLDLGLQ 368
           K ++SWN +   ++ N +  + A  +++ I +G  PN + T + +L  C    DL +G  
Sbjct: 118 KSLVSWNAMLTAYARNGHSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGKM 177

Query: 369 LQCLALHCGFLDEENVTS-SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           +   A+ CGF  E+ V   +++  + +CGAV  A  VFD ++ K++     ++ GY  + 
Sbjct: 178 IHSRAVCCGFDKEDQVLQVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQHG 237

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC- 486
              + L+ +  +    V  N  T+  V+  C   E  +    IH  I+ +   + G +  
Sbjct: 238 HSLEALEIYHAM---NVPPNRVTYSTVLAACSTLEQGK---AIHQRILASKLENTGLVLE 291

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+K Y +F    ++    +  ER D+ +W  M+   V  G   EA+ ++  +      
Sbjct: 292 TALVKMYASFDDCASARGVFDRMERRDLVAWNTMLGGYVQSGRGKEALELYEDM---KMD 348

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGAR- 604
           PD   L T+L +C+ +G     K  H  +I+      + ++ S++++ YAKCG +  AR 
Sbjct: 349 PDSTTLSTLLGACSLLGDLSSGKIFHELLIERKMMQADAFLCSSLVNMYAKCGSVGTARE 408

Query: 605 --MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
              AF   F ++ V+ +NT++ A AH G  S+++E+  +M+L  + P   TFV  + AC+
Sbjct: 409 VFHAFRAGFGASSVL-WNTILAALAHTGDSSQSLELLLEMELEGVTPDSTTFVCALVACN 467

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GL+ +G LLF+ +   +  +PS + + C+ D+L R G ++ A+ V+E MPF+     +
Sbjct: 468 HAGLLQRGKLLFQILVLDHSSRPSLEHFLCMADLLGRAGRVDFAREVVEGMPFEADAVAW 527

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++LL   R   + E   +A+++L+ +  +   A VLLS
Sbjct: 528 KALLGSSRGSIDLEKAAFAAQRLVEMDEELGQAFVLLS 565



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 190/403 (47%), Gaps = 16/403 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           GT +H HI   G   D+ LQN+L+A+Y + G       VF  + E++LVSW  +++A  +
Sbjct: 73  GTAIHRHISSSGLEFDLMLQNSLVALYGRYGRVDLARSVFQSIPEKSLVSWNAMLTAYAR 132

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKIRIEK-NP 180
           NG        Y +M   G  PNE + + +V+  C S    + G  IH  A+    +K + 
Sbjct: 133 NGHSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGKMIHSRAVCCGFDKEDQ 192

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  +V+NFY K G VA A RVF  I+   V    AMIGGYA  G+  EAL +  +M   
Sbjct: 193 VLQVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQHGHSLEALEIYHAM--- 249

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDY 299
            +  ++ T+   L  CS     + G+ IH  I+ S++E   + +  AL+ MY        
Sbjct: 250 NVPPNRVTYSTVLAACS---TLEQGKAIHQRILASKLENTGLVLETALVKMYASFDDCAS 306

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF+RM  +D+++WNT+ GG+ ++    +   L+    +    P+  T S LL  C  
Sbjct: 307 ARGVFDRMERRDLVAWNTMLGGYVQSGRGKEALELYEDMKMD---PDSTTLSTLLGACSL 363

Query: 360 LLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSY---KNITT 415
           L DL  G     L +    +  +  + SSL+ M+ +CG+V  A  VF         +   
Sbjct: 364 LGDLSSGKIFHELLIERKMMQADAFLCSSLVNMYAKCGSVGTAREVFHAFRAGFGASSVL 423

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           WN +L+        +  L+    +   GV  +  TF   +  C
Sbjct: 424 WNTILAALAHTGDSSQSLELLLEMELEGVTPDSTTFVCALVAC 466



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 214/500 (42%), Gaps = 29/500 (5%)

Query: 89  YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAV 148
           Y KCG       +F+ +  ++ + W  ++ A   NG  +  L ++  M   G  P+    
Sbjct: 1   YGKCGSVDRARSLFESLPRKSSLCWNFVIGAYAGNGRGEESLYLFRRMALEGERPDRHTF 60

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
             V+  C +      G +IH       +E +  +  S++  Y + G V  A  VF SI  
Sbjct: 61  VRVLGACTNTAQ---GTAIHRHISSSGLEFDLMLQNSLVALYGRYGRVDLARSVFQSIPE 117

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY-TFINALQGCSLVADFDIGRQ 267
             +  WNAM+  YA  G+  EA +  + M+F GI  ++  T    L  CS   D  IG+ 
Sbjct: 118 KSLVSWNAMLTAYARNGHSREAAHAYNEMIFTGIEPNEISTLTTVLGACSSSRDLKIGKM 177

Query: 268 IHGLIIRSEVECSISIVN-ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           IH   +    +    ++  A+++ Y K   +  A +VF+ +A K V+    + GG++++ 
Sbjct: 178 IHSRAVCCGFDKEDQVLQVAVVNFYGKCGAVADARRVFDGIAQKSVVVHTAMIGGYAQHG 237

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE--EN- 383
           +  +   ++H   +    PN VT+S +L  C  L         Q  A+H   L    EN 
Sbjct: 238 HSLEALEIYHAMNVP---PNRVTYSTVLAACSTL--------EQGKAIHQRILASKLENT 286

Query: 384 ---VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              + ++L+ M+        A  VFD +  +++  WN +L GY  +    + L+ + ++ 
Sbjct: 287 GLVLETALVKMYASFDDCASARGVFDRMERRDLVAWNTMLGGYVQSGRGKEALELYEDM- 345

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII-KTGFSSCGYICSSLIKSYVNFGQL 499
              ++ +  T   ++  C    +       H  +I +    +  ++CSSL+  Y   G +
Sbjct: 346 --KMDPDSTTLSTLLGACSLLGDLSSGKIFHELLIERKMMQADAFLCSSLVNMYAKCGSV 403

Query: 500 DNSFEFSNGAERLDMAS---WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
             + E  +       AS   W  +++AL H G + +++ +   +   G  PD       L
Sbjct: 404 GTAREVFHAFRAGFGASSVLWNTILAALAHTGDSSQSLELLLEMELEGVTPDSTTFVCAL 463

Query: 557 NSCAAIGAYQRTKSIHPFVI 576
            +C   G  QR K +   ++
Sbjct: 464 VACNHAGLLQRGKLLFQILV 483


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 260/519 (50%), Gaps = 1/519 (0%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI++   ++    + C  +     GR  H  + R+       + N+++ MY K   +  A
Sbjct: 5   GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            KVF+ M +++++SWNT+   ++EN    +   +F   +   ++PN  T+   LR     
Sbjct: 65  RKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNP 124

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L++G Q+   A+  G     +V +++  M+ +CG +E A  VF+ +S KN   W  ++
Sbjct: 125 SGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIM 184

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
            GY       D L  F  +   GVE++   F  V++ C   E      QIHG I+K G  
Sbjct: 185 VGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLE 244

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + + L+  YV    L+++ +        +  SW A+++     G   EA+  F SL
Sbjct: 245 SEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESL 304

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
                  + +   +I  +C+A+  +      H   IK       +  SA+I  Y++CG +
Sbjct: 305 RTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRL 364

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             A   F +S +  D + +  +I  YA+ G   EA+++F +M+   ++P+  TF++V++A
Sbjct: 365 DYATRVF-ESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTA 423

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           CSH GLV +G    +SM S YG+  + D Y C+VD+ SR G+L++A  +I  MPF P   
Sbjct: 424 CSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAM 483

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            ++ LL GC  + N E+GE A+E L  L P++ A ++L+
Sbjct: 484 SWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILM 522



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
            +KS   G   H  + +       FL+N+++ MY KCG      +VFDEM ERNLVSW  
Sbjct: 22  KIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNT 81

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I+SA  +NG FD G  M+ +M      PN       ++  ++    E G  IH  A++  
Sbjct: 82  IISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSG 141

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  N  V  ++ N Y K G +  AE VF  +S  +   W  ++ GY       +AL + +
Sbjct: 142 LGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFA 201

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M+ EG+ +D+Y F   L+ C+ + + + GRQIHG I++  +E  +S+   L+D Y+K S
Sbjct: 202 KMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCS 261

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++ A K FE +++ + +SW+ L  G+ +     +    F          N  T++ + +
Sbjct: 262 NLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQ 321

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  L D + G Q    A+    +  ++  S++I M+ RCG ++ A  VF+++   +   
Sbjct: 322 ACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVA 381

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           W  +++GY +     + LK F  + + GV  N  TF  V+  C  S
Sbjct: 382 WTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHS 427



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 178/363 (49%), Gaps = 2/363 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G Q+H H ++ G  ++  +   +  MY KCG+      VF++M+E+N V+WT I+    
Sbjct: 129 IGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYT 188

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q       L ++  M   G   +E+    V+K C  +    FG  IH   +K+ +E    
Sbjct: 189 QAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVS 248

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG  +++FY K  ++ +A + F  IS  +   W+A+I GY   G   EAL    S+    
Sbjct: 249 VGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRS 308

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + ++ +T+ +  Q CS +ADF+ G Q H   I+S +       +A+I MY +   +DYA 
Sbjct: 309 VDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYAT 368

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           +VFE + D D ++W  +  G++   N  +   LF +    G RPN VTF  +L  C    
Sbjct: 369 RVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSG 428

Query: 362 DLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
            +  G Q L+ ++ + G     +    ++ ++ R G ++ A  +  ++ +  +  +W  L
Sbjct: 429 LVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCL 488

Query: 420 LSG 422
           L G
Sbjct: 489 LGG 491


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 173/600 (28%), Positives = 292/600 (48%), Gaps = 22/600 (3%)

Query: 151 VMKVCVSMGASEFGYSIHC------FALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVF 203
           ++K C  +G    G  +H         L  R E    F+G  ++  Y K G    A+R F
Sbjct: 20  LLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAF 79

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
            SI+  ++  W +++  Y H G   +AL     M+  G+  D+  F+ AL  C ++   +
Sbjct: 80  DSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLE 139

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
            G  IH  I    ++  + I NAL+ MY K   +D A ++F+ +  K+VISW  L   F+
Sbjct: 140 DGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFA 199

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK--LLDLDLGLQLQCLALHCGFLDE 381
           EN    +T  L     + G +P+ V    LL  C    +LD D  +    + +  G   E
Sbjct: 200 ENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYI-VGSGLDRE 258

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNV---SYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             V ++L+ MF RCG V+ A  +F+ V   S + I  WN +++ Y    C  + L    +
Sbjct: 259 AVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDS 318

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV+ N  TF   +  C   ++ +    +H  I ++GF     + ++L+  Y   G 
Sbjct: 319 LQLQGVKPNCITFISSLGACSSLQDGR---ALHLLIDESGFDREVSVANALVTMYGRCGS 375

Query: 499 -LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYILGTIL 556
            LD++  FS  AE+ D+ASW + ++A  + G + E + +   +  E G +P    L T +
Sbjct: 376 LLDSAKLFSEMAEK-DLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAM 434

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           ++C  +     +K +H    +LG  +E  VA+ ++D Y K GD+  AR  FD++   N V
Sbjct: 435 SACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRN-V 493

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
             +N +  AY   G+    + +   M+    +P   TFVS++S C H GL+++    F +
Sbjct: 494 TTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEARYNFVA 553

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI-EIMPFQP-SPTVYRSLLSGCRIHGN 734
           M  ++G+ PSP  Y C++D+L+R G L+ A+  I  I    P S  ++ +LL  CR  G+
Sbjct: 554 MRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMALLGACRSLGD 613



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 203/422 (48%), Gaps = 9/422 (2%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +FLA +L++   LK    G  +H  I      +D+ + N L++MY KCG      ++FD 
Sbjct: 124 VFLA-ALNVCGILKRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDC 182

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA-SEF 163
           +  +N++SWT++VS   +NG       +   M   G  P++  + +++ VC S G   E 
Sbjct: 183 LEMKNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDED 242

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI---SSDDVGCWNAMIGG 220
            +  H + +   +++   V  ++L+ +A+ G V  A  +F  +   S+  + CWNAMI  
Sbjct: 243 SWMAHDYIVGSGLDREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITA 302

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           YAH G   EAL ++ S+  +G+  +  TFI++L  CS + D   GR +H LI  S  +  
Sbjct: 303 YAHRGCSKEALFLLDSLQLQGVKPNCITFISSLGACSSLQD---GRALHLLIDESGFDRE 359

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +S+ NAL+ MY +   +  + K+F  MA+KD+ SWN+     + +    +   L  +   
Sbjct: 360 VSVANALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRG 419

Query: 341 SGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
            G   P+ VT    +  CG L D     ++   A   G   E  V + L+ M+ + G V+
Sbjct: 420 EGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVD 479

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A  +FD    +N+TTWN +   Y        VL     +   G   +  TF  ++  C 
Sbjct: 480 TARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCG 539

Query: 460 RS 461
            S
Sbjct: 540 HS 541



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/653 (23%), Positives = 283/653 (43%), Gaps = 38/653 (5%)

Query: 63  GTQVHGHIVKLGFTND-------IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           G ++H  I + G   D        FL N L+ MY KCG      R FD +A +N+ SWT 
Sbjct: 33  GKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHKNIFSWTS 92

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I+ A    G     L+ +  M   G  P+     + + VC  +   E G  IH       
Sbjct: 93  ILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKL 152

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           ++ +  +G ++++ Y K G +  A+++F  +   +V  W  ++  +A  G   E   ++ 
Sbjct: 153 LDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILVSVFAENGRRRETWGLLR 212

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISIVNALIDMYIKS 294
           SM  EGI  DK   +  L  CS     D    + H  I+ S ++    +  AL+ M+ + 
Sbjct: 213 SMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGLDREAVVATALLSMFARC 272

Query: 295 SGMDYAFKVFERMADKD---VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
             +D A ++FE++AD     +  WN +   ++      +   L     L G +PN +TF 
Sbjct: 273 GRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKPNCITFI 332

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
             L  C  L D   G  L  L    GF  E +V ++L+ M+ RCG++  +  +F  ++ K
Sbjct: 333 SSLGACSSLQD---GRALHLLIDESGFDREVSVANALVTMYGRCGSLLDSAKLFSEMAEK 389

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++ +WN  ++ + ++    + +K    +  E G+E +  T    +  C    +     ++
Sbjct: 390 DLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRV 449

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H    + G  S   + + L+  Y   G +D +    + A R ++ +W AM  A    G  
Sbjct: 450 HERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVT 509

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI---KLGFNTEVYVA 587
              + +  ++   G +PD     ++L+ C   G  +  +  + FV    + G +      
Sbjct: 510 RGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLLEEAR--YNFVAMRREFGIDPSPKHY 567

Query: 588 SAVIDAYAKCGDIKG-----ARMAFDQSFNSNDVIVYNTLIMAYAHHG--------LVSE 634
           S VID  A+ G+++      AR++     +S    ++  L+ A    G            
Sbjct: 568 SCVIDLLARAGELQQAEDFIARISVSSPASSP---MWMALLGACRSLGDSSSRARRAARN 624

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           AM++ +KM+  +     A  V++ + C+  G  D+   + K+M ++ G++  P
Sbjct: 625 AMDV-EKMEPRSQHDPSAAHVALANICAASGNWDEALSIRKAM-AEKGLRKEP 675



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 188/398 (47%), Gaps = 15/398 (3%)

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS-------LIYMFCRCGAVEMA 401
           +++ LL++CG+L DL  G +L       G L ++   S        L+ M+ +CG  + A
Sbjct: 16  SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
              FD++++KNI +W  +L  Y      A  L+ F  + ++GVE +   F   +  C   
Sbjct: 76  QRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGIL 135

Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
           +  +    IH  I      S   I ++L+  Y   G+LD + +  +  E  ++ SW  ++
Sbjct: 136 KRLEDGAGIHRQIQDKLLDSDLEIGNALVSMYGKCGRLDLAKQLFDCLEMKNVISWTILV 195

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGF 580
           S     G   E   +  S+   G KPD+ +L T+LN C++ G       + H +++  G 
Sbjct: 196 SVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGSGL 255

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV--YNTLIMAYAHHGLVSEAMEI 638
           + E  VA+A++  +A+CG +  AR  F++  + +  ++  +N +I AYAH G   EA+ +
Sbjct: 256 DREAVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFL 315

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
            D ++L  ++P+  TF+S + ACS    +  G  L   +D + G          LV M  
Sbjct: 316 LDSLQLQGVKPNCITFISSLGACSS---LQDGRALHLLID-ESGFDREVSVANALVTMYG 371

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           R G L D+  +   M  +     + S ++    HG  +
Sbjct: 372 RCGSLLDSAKLFSEMA-EKDLASWNSAIAAHAYHGRSD 408



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 4/193 (2%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           +Q   +  L    + L  ++S    L       +VH    +LG  ++  + N L+ MY K
Sbjct: 415 DQMRGEGGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGK 474

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
            G       +FD    RN+ +W  +  A  Q G     L +   M+ +G+ P+     S+
Sbjct: 475 AGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSL 534

Query: 152 MKVCVSMG-ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           + VC   G   E  Y+      +  I+ +P     V++  A+ G++  AE     IS   
Sbjct: 535 LSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSS 594

Query: 211 VGC---WNAMIGG 220
                 W A++G 
Sbjct: 595 PASSPMWMALLGA 607


>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Brachypodium distachyon]
          Length = 779

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 174/594 (29%), Positives = 299/594 (50%), Gaps = 22/594 (3%)

Query: 185 SVLNFYA-----KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           S+LN YA     + G V    R+F +    +V  WN ++G Y   G  +EAL +   ML 
Sbjct: 142 SLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLE 201

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE--CSISIVNALIDMYIKSSGM 297
           +GI     +F+N     +   D      ++G++I+  VE    + +V++ I M+ +   +
Sbjct: 202 DGIRPTPVSFVNVFPAAA-SDDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDV 260

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQ 356
             A  VF+  A K++  WNT+  G+ +N    +   LF + + S   P + VTF   +  
Sbjct: 261 QSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITA 320

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             +  D  LG QL    L  G      V   ++L+ M+ RCG V  A  +FD +  K+I 
Sbjct: 321 ASQSQDGKLGQQLHGY-LMKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIV 379

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           +WN +++ +  N  D + L     + +SG   +  T   V+     + + Q+  Q HG +
Sbjct: 380 SWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYL 439

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMASWGAMMSALVHQGHNHEA 533
           I+ G    G + S LI  Y   G +D +    +G     D  +W AM++     G   +A
Sbjct: 440 IRHGIEGEG-LESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQA 498

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           V  F ++VEAG +P    L ++L +C  +G   Q  K IH F ++   +T ++V +A++D
Sbjct: 499 VLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVD 558

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KCG+I  A   FD+       + Y T+I     HG    A+ +F  M+   L+P   
Sbjct: 559 MYSKCGEITAAENVFDR-MTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAV 617

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF++ +SAC++ GLVD+G  L++SM++ +G+  +P  + C+VD+L++ G +E+A   +E 
Sbjct: 618 TFLAAISACNYSGLVDEGLSLYRSMET-FGLSATPQHHCCIVDLLAKAGRVEEAYDFVES 676

Query: 713 MPFQPS-PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH----VLLSK 761
           +    +   ++ SLL+ C+  G +EL  + ++KLL +  +   AH    VLLS+
Sbjct: 677 LGEDGNFIAIWGSLLASCKAQGKQELTAFVTDKLLNIEKQYGHAHAGYNVLLSQ 730



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 286/599 (47%), Gaps = 22/599 (3%)

Query: 66  VHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWG-----LRVFDEMAERNLVSWTLIVS 118
           VH H+++      +   L+N+L+ +Y+ C  +  G      R+FD   +RN+VSW  +V 
Sbjct: 122 VHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVG 181

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE- 177
             ++ G     L+M++ M  +G  P   +  +V     S   S + + ++   +K  +E 
Sbjct: 182 WYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASDDPS-WPFFLYGMLIKHGVEY 240

Query: 178 -KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV-VS 235
             + FV  S +  ++++GDV +A  VF   +  ++  WN MI GY   G   EA+++ + 
Sbjct: 241 VSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQ 300

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV--NALIDMYIK 293
            M  +G+ +D  TF++A+   S   D  +G+Q+HG +++  +  ++ ++  NAL+ MY +
Sbjct: 301 IMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLMKG-MRSTLPVILGNALVVMYSR 359

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
              +  AF +F+++ +KD++SWNT+   F +N    +   L ++   SG   + VT + +
Sbjct: 360 CGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAV 419

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KN 412
           L       DL +G Q     +  G ++ E + S LI M+ + G ++MA  VFD     ++
Sbjct: 420 LSAASNTGDLQIGKQSHGYLIRHG-IEGEGLESYLINMYSKSGHIDMAQRVFDGYGNDRD 478

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQMVGQIH 471
             TWN +++GY  +      +  F  + E+GVE    T   V+  C    E  Q   QIH
Sbjct: 479 EVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIH 538

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
              ++    +  ++ ++L+  Y   G++  +    +        ++  M+S L   G   
Sbjct: 539 SFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGD 598

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
            A+ +F+S+ + G KPD       +++C   G      S++  +   G +        ++
Sbjct: 599 RALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSATPQHHCCIV 658

Query: 592 DAYAKCGDIKGARMAFDQSF--NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
           D  AK G ++ A   F +S   + N + ++ +L+ +    G   + +  F   KL N++
Sbjct: 659 DLLAKAGRVEEA-YDFVESLGEDGNFIAIWGSLLASCKAQG--KQELTAFVTDKLLNIE 714



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 9/382 (2%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           FL+   + S++   + LG Q+HG+++K +  T  + L N L+ MYS+CG       +FD+
Sbjct: 314 FLSAITAASQSQDGK-LGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQ 372

Query: 105 MAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           + E+++VSW  +V+A +QN +FD  GL +   M  +GF+ +   + +V+    + G  + 
Sbjct: 373 LPEKDIVSWNTMVTAFVQN-DFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQI 431

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYA 222
           G   H + ++  IE    +   ++N Y+K G +  A+RVF    +D D   WNAMI GY 
Sbjct: 432 GKQSHGYLIRHGIEGEG-LESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYT 490

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD-FDIGRQIHGLIIRSEVECSI 281
             G   +A+    +M+  G+     T  + L  C  V +    G+QIH   +R  ++ +I
Sbjct: 491 QSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSLDTNI 550

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +  AL+DMY K   +  A  VF+RM +K  +++ T+  G  ++    +   LF+    +
Sbjct: 551 FVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDN 610

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G +P+ VTF   +  C     +D GL L       G          ++ +  + G VE A
Sbjct: 611 GLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSATPQHHCCIVDLLAKAGRVEEA 670

Query: 402 HSVFDNVSYKN--ITTWNELLS 421
           +   +++      I  W  LL+
Sbjct: 671 YDFVESLGEDGNFIAIWGSLLA 692



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 139/288 (48%), Gaps = 17/288 (5%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L   LS + N     +G Q HG++++ G   +  L++ LI MYSK G+     RVF
Sbjct: 412 DAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLESYLINMYSKSGHIDMAQRVF 470

Query: 103 DEMA-ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           D    +R+ V+W  +++   Q+G+ +  +  +  M   G  P    + SV+  C  +G  
Sbjct: 471 DGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEG 530

Query: 162 -EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            + G  IH FAL+  ++ N FVG ++++ Y+K G++ AAE VF  ++      +  MI G
Sbjct: 531 VQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISG 590

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH------GLIIR 274
               G+G  AL +  SM   G+  D  TF+ A+  C+     D G  ++      GL   
Sbjct: 591 LGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSAT 650

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVIS-WNTLFG 320
            +  C I      +D+  K+  ++ A+   E +  D + I+ W +L  
Sbjct: 651 PQHHCCI------VDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLA 692



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/411 (21%), Positives = 185/411 (45%), Gaps = 29/411 (7%)

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG--FLDEENVTSSLIYMFCRC-----G 396
           R +H T+S  L  C +   L LG  +    L       D   + +SL+ ++  C     G
Sbjct: 97  RSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHG 156

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            V++   +FD    +N+ +WN L+  Y       + L+ F  + E G+     +F  V  
Sbjct: 157 GVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFP 216

Query: 457 TCCRSENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
               S++      ++G +IK G  + S  ++ SS I  +   G + ++    + A + ++
Sbjct: 217 AAA-SDDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNI 275

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK---SI 571
             W  M++  V  G   EA+ +F  ++ +   P + +  T L++  A    Q  K    +
Sbjct: 276 EVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVV--TFLSAITAASQSQDGKLGQQL 333

Query: 572 HPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           H +++K   +T  V + +A++  Y++CG++  A   FDQ     D++ +NT++ A+  + 
Sbjct: 334 HGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQ-LPEKDIVSWNTMVTAFVQND 392

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-----KGCLLFKSMDSQYGMQP 685
              E + +  +M  +       T  +V+SA S+ G +       G L+   ++ + G++ 
Sbjct: 393 FDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGE-GLE- 450

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
                  L++M S++G+++ A+ V +          + ++++G    G  E
Sbjct: 451 -----SYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPE 496



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H   ++     +IF+   L+ MYSKCG       VFD M E++ V++T ++S   Q
Sbjct: 534 GKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQ 593

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +G  D  L ++  M+ NG  P+     + +  C   G  + G S++       +   P  
Sbjct: 594 HGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSATPQH 653

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDD--VGCWNAMIG--------------------- 219
            C +++  AK G V  A     S+  D   +  W +++                      
Sbjct: 654 HCCIVDLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTAFVTDKLLNI 713

Query: 220 ----GYAHCGYGFEALNVVSSMLF 239
               G+AH GY     NV+ S LF
Sbjct: 714 EKQYGHAHAGY-----NVLLSQLF 732


>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial; Flags: Precursor
 gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
           from Arabidopsis thaliana gb|AC008153 and contains
           multiple PPR PF|01535 repeats [Arabidopsis thaliana]
 gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 558

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 266/500 (53%), Gaps = 6/500 (1%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFS 323
           +Q+H  +I    E  + + ++L + YI+S+ +D+A   F R+    ++  SWNT+  G+S
Sbjct: 24  QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83

Query: 324 ENKN--PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           ++K         L+++        +       ++ C  L  L+ G+ +  LA+  G   +
Sbjct: 84  KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKD 143

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
           + V  SL+ M+ + G +E A  VFD +  +N   W  L+ GY     D +V + FC + +
Sbjct: 144 DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SSCGYICSSLIKSYVNFGQLD 500
           +G+ ++  T   +V+ C      ++   +HG  I+  F     Y+ +S+I  YV    LD
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           N+ +    +   ++  W  ++S         EA  +F  ++     P++  L  IL SC+
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
           ++G+ +  KS+H ++I+ G   +    ++ ID YA+CG+I+ AR  FD     N VI ++
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN-VISWS 382

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           ++I A+  +GL  EA++ F KMK  N+ P+  TFVS++SACSH G V +G   F+SM   
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           YG+ P  + Y C+VD+L R G + +AK  I+ MP +P  + + +LLS CRIH   +L   
Sbjct: 443 YGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGE 502

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
            +EKLL + P+  + +VLLS
Sbjct: 503 IAEKLLSMEPEKSSVYVLLS 522



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/495 (25%), Positives = 235/495 (47%), Gaps = 22/495 (4%)

Query: 44  PIFLAKSL-SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           P+  A++L ++    K+     QVH  ++  GF +++ L ++L   Y +     +    F
Sbjct: 3   PVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSF 62

Query: 103 DEMA--ERNLVSWTLIVSAAIQNGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
           + +   +RN  SW  I+S   ++    +   L +Y  M+ +    + F +   +K CV +
Sbjct: 63  NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G  E G  IH  A+K  ++K+ +V  S++  YA+LG + +A++VF  I   +   W  ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEV 277
            GY       E   +   M   G+ +D  T I  ++ C  V    +G+ +HG+ I RS +
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + S  +  ++IDMY+K   +D A K+FE   D++V+ W TL  GF++ +   +   LF +
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCG 396
            +     PN  T + +L  C  L  L  G  +    +  G  +D  N T S I M+ RCG
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SFIDMYARCG 361

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
            ++MA +VFD +  +N+ +W+ +++ +  N    + L  F  +    V  N  TF  ++ 
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421

Query: 457 TCCRSENQ-------QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
            C  S N        + + + +G + +    +C      ++      G++  +  F +  
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC------MVDLLGRAGEIGEAKSFIDNM 475

Query: 510 ERLDMAS-WGAMMSA 523
               MAS WGA++SA
Sbjct: 476 PVKPMASAWGALLSA 490



 Score = 43.1 bits (100), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-S 610
           L TIL+    +     T+ +H  VI  GF  EV + S++ +AY +   +  A  +F++  
Sbjct: 10  LLTILSQAKTL---NHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66

Query: 611 FNSNDVIVYNTLIMAYAHHGL--VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
               +   +NT++  Y+       S+ + ++++M+           V  + AC   GL++
Sbjct: 67  CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
            G +L   +  + G+         LV+M ++ G +E A+ V + +P + S
Sbjct: 127 NG-ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 280/577 (48%), Gaps = 4/577 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GIT 243
           +L+ YA LGD+A+A RV       D   +   +G +A  G   EA+ V   M        
Sbjct: 66  LLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQ 125

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
            D      AL+     ADF  GR++H  ++++     + ++N L+DMY K   +  A KV
Sbjct: 126 EDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKV 184

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+R+ D++V+SW ++  G  +N    +   LF++       P+  T + +L  C  L  L
Sbjct: 185 FDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSL 244

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  +    +  G +    +T++++ M+ +CG  E A  VFD +S+ ++  W  ++ GY
Sbjct: 245 HQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGY 304

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    D L  F +     +  N  T   V+    +  N  +   IHG  +K G     
Sbjct: 305 TQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEND 364

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y     L ++          D+ +W ++++         +A+ +F  +   
Sbjct: 365 VVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQ 424

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD   +   L++C  +G     K  H + +K  F + +YV +A+++ Y KC D+  A
Sbjct: 425 GSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSA 484

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  F +  N  + + +  +I  Y   G  + ++++F++M   N+QP++A F S++S CSH
Sbjct: 485 QRVFSE-MNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSH 543

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G+V  G   F+SM   + + PS   Y C+VD+L+R G LE+A   I+ MP Q   ++++
Sbjct: 544 TGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQ 603

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + L GC++H   E  E A  ++++L P      V++S
Sbjct: 604 AFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMS 640



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 216/442 (48%), Gaps = 9/442 (2%)

Query: 20  ATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDI 79
           A  + + R C   Q        +D + L+ +L  +        G ++H  +VK G   D+
Sbjct: 112 AVHRDMRRRCPAEQ--------EDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDL 162

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
           F+ NNL+ MY+K G      +VFD + +RN+VSWT ++S  +QNG    GL ++ +M+  
Sbjct: 163 FVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQE 222

Query: 140 GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
             +P+E+ + SV+  C  +G+   G  IH   +K  +  N F+  ++L+ Y K G+   A
Sbjct: 223 SILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDA 282

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            +VF  +S  D+  W  MI GY   G   +AL +     F  I  +  T    L   + +
Sbjct: 283 RQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQL 342

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            +  +GR IHG+ ++     +  ++NAL+DMY K   +  A  +F R+ +KDV++WN+L 
Sbjct: 343 RNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLI 402

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G++EN        LF    + GS P+ ++    L  C  L DL +G      A+   F+
Sbjct: 403 AGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFM 462

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               V ++L+ ++ +C  +  A  VF  ++ +N  TW  ++ GY      A  +  F  +
Sbjct: 463 SNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEM 522

Query: 440 WESGVEVNGCTFFYVVETCCRS 461
            +  ++ N   F  ++ TC  +
Sbjct: 523 LKDNIQPNEAVFTSILSTCSHT 544



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/630 (22%), Positives = 285/630 (45%), Gaps = 12/630 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  ++  G    +     L++ Y+  G      RV DE    +  ++ + +      G 
Sbjct: 47  LHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGR 106

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNPFVG 183
               + ++ DM+       E  V   + +  ++ +++FGY   +HC  +K     + FV 
Sbjct: 107 HAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVM 165

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
            ++++ YAK GD+  A +VF  I   +V  W +M+ G    G   E L + + M  E I 
Sbjct: 166 NNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESIL 225

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
             +YT  + L  C+++     GR IHG +++  +  +  I  A++DMY+K    + A +V
Sbjct: 226 PSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQV 285

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ ++  D++ W T+  G+++N +P     LF         PN VT + +L    +L +L
Sbjct: 286 FDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNL 345

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG  +  +++  G ++ + V ++L+ M+ +C A+  A  +F  V  K++ TWN L++GY
Sbjct: 346 SLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGY 405

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC-CRSENQQMVGQ-IHGAIIKTGFSS 481
             N   +D L  F ++   G   +  +    +  C C  +   ++G+  H   +K  F S
Sbjct: 406 AENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGD--LLIGKCFHTYAVKHAFMS 463

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
             Y+ ++L+  Y     L ++    +     +  +WGAM+     QG +  ++ +F+ ++
Sbjct: 464 NIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEML 523

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
           +   +P+E +  +IL++C+  G     K               +   + ++D  A+ G++
Sbjct: 524 KDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNL 583

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A     +     D  ++   +     H  +  A E  ++M +  L P    F  +MS 
Sbjct: 584 EEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMV--LHPDTPDFCVMMSN 641

Query: 661 C-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
             +  G  DK   + K M  + G+   P C
Sbjct: 642 LYTSYGRWDKSLAIRKLM-KERGLVKLPGC 670



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 139/292 (47%), Gaps = 4/292 (1%)

Query: 34  FCSDSFLRKDP--IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           F  D F+R  P  + +A  LS S  L++  LG  +HG  VKLG   +  + N L+ MY+K
Sbjct: 317 FVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAK 376

Query: 92  CGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSV 151
           C        +F  +  +++V+W  +++   +N      L ++  M+  G +P+  +V + 
Sbjct: 377 CKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNA 436

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  CV +G    G   H +A+K     N +V  ++LN Y K  D+ +A+RVF  ++  + 
Sbjct: 437 LSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNT 496

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-IHG 270
             W AMIGGY   G    ++++ + ML + I  ++  F + L  CS      +G++    
Sbjct: 497 VTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFES 556

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
           +     +  S+     ++D+  ++  ++ A +  ++M    D   W     G
Sbjct: 557 MAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHG 608



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 25/204 (12%)

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           L  A       +L  +L +C  + +    +++H  ++  G    +   + ++  YA  GD
Sbjct: 19  LPRASSPDANPLLHRLLPACTTLPSL---RALHARLLAHGLLRGLRAHTKLLSCYAALGD 75

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +  AR   D++ +  D   Y   +  +A  G  +EA+ +   M+     P++   V V+S
Sbjct: 76  LASARRVLDETPHP-DAYTYKVALGWHAAAGRHAEAVAVHRDMR--RRCPAEQEDVVVLS 132

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC----------LVDMLSRNGYLEDAKHV 709
                 L  K  +  +S D  YG +   D              LVDM ++ G L++A+ V
Sbjct: 133 ------LALKAAV--RSADFGYGRRLHCDVVKAGGGDLFVMNNLVDMYAKGGDLKNARKV 184

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHG 733
            + +P + +   + S+LSGC  +G
Sbjct: 185 FDRIPDR-NVVSWTSMLSGCLQNG 207


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 176/585 (30%), Positives = 273/585 (46%), Gaps = 73/585 (12%)

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           ++T  N L   S  A     RQ H  I+++ +     +   L+  Y  +     A  V +
Sbjct: 15  QHTIFNCLN--STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLD 72

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            + + +V S++TL   FS+        S F + +  G  P++      ++ C  L  L  
Sbjct: 73  LVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKP 132

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
             Q+  +A   GF  +  V SSL++M+ +C  +  AH VFD +   ++ +W+ L++ Y  
Sbjct: 133 ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYAR 192

Query: 426 NCCDADVLKTFCNIWESGVEVN-----------------------------------GCT 450
             C  +  + F  + +SGV+ N                                   G T
Sbjct: 193 QGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTT 252

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN----------FGQLD 500
              V+      E+  M   IHG +IK G  S   + S+LI  Y            F Q+D
Sbjct: 253 ISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMD 312

Query: 501 -------NSFEFS---NG---------------AERLDMASWGAMMSALVHQGHNHEAVT 535
                  N+F F    NG                  L++ SW +M++     G + EA+ 
Sbjct: 313 HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALE 372

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  +  AG KP+   +  +L +C  I A    K+ H F ++ G +T+VYV SA+ID YA
Sbjct: 373 LFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYA 432

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG I+ +R+ FD    + +++ +N +I  YA HG   EAMEIFD M+ +  +P   +F 
Sbjct: 433 KCGRIQASRICFD-GIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFT 491

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            V+SACS  GL ++G   F SM S+YG++   + Y C+V +LSR G LE A  +I  MP 
Sbjct: 492 CVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPV 551

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            P   V+ +LLS CR+H N  LGE A+EKL  L P N   ++LLS
Sbjct: 552 NPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLS 596



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 197/467 (42%), Gaps = 70/467 (14%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q H HI+K G  ND  L   L++ Y+    F     V D + E N+ S++ ++ A  +  
Sbjct: 34  QAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFH 93

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
           +F   L  +  M T G MP+   + S +K C  + A +    +H  A     + + FV  
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDV-------------GC------------------ 213
           S+++ Y K   +  A RVF  +   DV             GC                  
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 214 ----WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               WN MI G+ H G   EA+ +   M   G   D  T  + L     + D  +G  IH
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 270 GLIIRSEVECSISIVNALIDMYIKSS----------GMDY-------------------- 299
           G +I+  +     + +ALIDMY K S           MD+                    
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333

Query: 300 -AFKVFERMADK----DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            + ++F ++ D+    +V+SW ++    S+N    +   LF +  ++G +PN VT   LL
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLL 393

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             CG +  L  G    C +L  G   +  V S+LI M+ +CG ++ +   FD +  KN+ 
Sbjct: 394 PACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLV 453

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            WN +++GY  +    + ++ F  +  SG + +  +F  V+  C +S
Sbjct: 454 CWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 139/317 (43%), Gaps = 37/317 (11%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
              D   ++  L    +L+  V+G  +HG+++K G  +D  + + LI MY KC       
Sbjct: 246 FEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMS 305

Query: 100 RVFDEM-----------------------------------AERNLVSWTLIVSAAIQNG 124
           +VFD+M                                    E N+VSWT +++   QNG
Sbjct: 306 QVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNG 365

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                L+++ +M+  G  PN   +  ++  C ++ A   G + HCF+L+  I  + +VG 
Sbjct: 366 RDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGS 425

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++++ YAK G + A+   F  I + ++ CWNA+I GYA  G   EA+ +   M   G   
Sbjct: 426 ALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKP 485

Query: 245 DKYTFINALQGCSLVADFDIGR-QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           D  +F   L  CS     + G    + +  +  +E  +     ++ +  ++  ++ A+ +
Sbjct: 486 DIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAM 545

Query: 304 FERMA-DKDVISWNTLF 319
             RM  + D   W  L 
Sbjct: 546 IRRMPVNPDACVWGALL 562



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 175/454 (38%), Gaps = 72/454 (15%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D   L  ++     L +     QVHG     GF +D F+Q++L+ MY KC       
Sbjct: 110 LMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAH 169

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFD--------MG---------------------- 129
           RVFD M E ++VSW+ +V+A  + G  D        MG                      
Sbjct: 170 RVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSG 229

Query: 130 -----LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                + M++DM   GF P+   + SV+     +     G  IH + +K  +  +  V  
Sbjct: 230 LYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSS 289

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGC------------------------------- 213
           ++++ Y K    +   +VF  +   DVG                                
Sbjct: 290 ALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMEL 349

Query: 214 ----WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
               W +MI   +  G   EAL +   M   G+  +  T    L  C  +A    G+  H
Sbjct: 350 NVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAH 409

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
              +R  +   + + +ALIDMY K   +  +   F+ +  K+++ WN +  G++ +    
Sbjct: 410 CFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAK 469

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKL-LDLDLGLQLQCLALHCGFLDEENVTSSL 388
           +   +F     SG +P+ ++F+ +L  C +  L  +       ++   G        + +
Sbjct: 470 EAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACM 529

Query: 389 IYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLS 421
           + +  R G +E A+++   +    +   W  LLS
Sbjct: 530 VTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLS 563


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 153/578 (26%), Positives = 278/578 (48%), Gaps = 5/578 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI--- 242
           +L+ YA LGD+A+A  VF      D   +  M+          EA+ +   M        
Sbjct: 70  LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D +    AL+ C   AD+  G ++H   ++        ++N+L+DMY K+  ++ A K
Sbjct: 130 AQDDFVLSLALKACIRSADYGYGTRLHCDAVKVGGADGF-VMNSLVDMYAKAGDLECARK 188

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VFER+  ++V+SW ++  G  +N        LF+K       P+  T + ++  C  L+ 
Sbjct: 189 VFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIG 248

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L  G  +    +  G +    ++++L+ M+ +CG +E A  VFD +SY ++  W  ++ G
Sbjct: 249 LHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVG 308

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N    D L+ F +   + +  N  T   V+    +  +  +   IHG  +K G    
Sbjct: 309 YTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEY 368

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++L+  Y     +  +          D+ +W +M+S        ++A+ +F  +  
Sbjct: 369 TVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSL 428

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PD   +   L++   +G     KS H + +K  F + +YV++A+++ Y KCGD+  
Sbjct: 429 KGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPS 488

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           AR  FD+  N  + + +  +I  Y   G  + ++++F +M    + P+   F S++S CS
Sbjct: 489 ARRVFDE-MNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCS 547

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H G+V      F SM   + + PS   Y C+VD+L+R G LE+A   I+ MP Q   +V+
Sbjct: 548 HTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVW 607

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + L GC +H   + GE A +++++L P+    +VL+S
Sbjct: 608 GAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLIS 645



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 153/575 (26%), Positives = 269/575 (46%), Gaps = 29/575 (5%)

Query: 19  HATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
           HA    +H+     + C ++   +D   L+ +L           GT++H   VK+G   D
Sbjct: 111 HAEAVALHQDMRRRRPCPEA---QDDFVLSLALKACIRSADYGYGTRLHCDAVKVGGA-D 166

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
            F+ N+L+ MY+K G      +VF+ +  RN+VSWT ++S  +QNG    GL ++  M+ 
Sbjct: 167 GFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQ 226

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           +   P+E+ + +V+  C ++     G  +H   +K  +  N F+  ++L+ Y K G++  
Sbjct: 227 DNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELED 286

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+ VF  +S  D+  W  MI GY   G   +AL +     F  I  +  T    L   + 
Sbjct: 287 AQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQ 346

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D  +GR IHG+ ++  +     +VNAL+DMY K   +  A ++F  +++KDV++WN++
Sbjct: 347 LRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSM 406

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G++EN        LF +  L G  P+ ++    L     L DL +G      A+   F
Sbjct: 407 LSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAF 466

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
           L    V+++L+ ++ +CG +  A  VFD ++ +N  TW  ++ GY      A  +  F  
Sbjct: 467 LSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGE 526

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-----------YICS 487
           + + GV  N   F  ++ TC  +      G +  A  K  F S             Y C 
Sbjct: 527 MLKDGVHPNDVAFTSILSTCSHT------GMVTAA--KRYFDSMAQHFNITPSMKHYAC- 577

Query: 488 SLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSAL-VHQGHNHEAVTIFHSLVEAGE 545
            ++      G L+ + EF  N   + D + WGA +    +H         I   +V   E
Sbjct: 578 -MVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPE 636

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           +PD Y+L  I N   + G ++++++I  ++ + G 
Sbjct: 637 RPDLYVL--ISNLYTSNGMWEKSQAIRRWMQEKGL 669



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 142/289 (49%), Gaps = 9/289 (3%)

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           + L+  Y   G L ++    +G  R D  S+G M+  LV    + EAV +   +      
Sbjct: 68  TKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPC 127

Query: 547 P---DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           P   D+++L   L +C     Y     +H   +K+G   + +V ++++D YAK GD++ A
Sbjct: 128 PEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECA 186

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           R  F++     +V+ + +++     +G  ++ + +F+KM+  N+ PS+ T  +V++ACS 
Sbjct: 187 RKVFER-IPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSA 245

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
              + +G  +  S+  Q G+  +      L+DM  + G LEDA+ V + + +     ++ 
Sbjct: 246 LIGLHQGRWMHGSVIKQ-GLMSNSFISAALLDMYVKCGELEDAQCVFDELSYI-DLVLWT 303

Query: 724 SLLSGCRIHGNK--ELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNL 770
           +++ G   +GN    L  +  +K   ++P +     +LS   + R+ +L
Sbjct: 304 TMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSL 352


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 197/737 (26%), Positives = 319/737 (43%), Gaps = 146/737 (19%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           R+ R+C  N   + +  R+       S S++ N K RV                DI   N
Sbjct: 14  RVRRVCTINFGHTSTSTRR-------SESVTNNNKPRVKDP-------------DILKWN 53

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
             I+ + + G+    L VF+ M  R+ VS+  ++S  ++N +F++   ++  M       
Sbjct: 54  KAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLF- 112

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
                        S      GY  +C                      +LGD   A R+F
Sbjct: 113 -------------SWNVMLTGYVRNC----------------------RLGD---ARRLF 134

Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
             +   DV  WN+++ GYA  GY  EA  V  +M                          
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM-------------------------- 168

Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
                         + SIS  N L+  Y+ +  ++ A  +FE  +D D+ISWN L GGF 
Sbjct: 169 ------------PEKNSISW-NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV 215

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
             K  G    LF K       P     S                                
Sbjct: 216 RKKKLGDARWLFDKM------PVRDAISW------------------------------- 238

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
             +++I  + + G +  A  +FD    +++ TW  ++SGY  N    D  KTF   ++  
Sbjct: 239 --NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM-LDEAKTF---FDEM 292

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
            E N  ++  ++    +++   +  ++  ++     SS     +++I  Y   G +  + 
Sbjct: 293 PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSW----NTMITGYGQIGDIAQAR 348

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +F +   + D  SW A+++     GH  EA+ +F  + + GE  +    G  L++CA I 
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A +  K IH   +K+G+ T  +V +A++  Y KCG I  A   F +     DV+ +NT++
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF-EGIEEKDVVSWNTML 467

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
             YA HG   +A+ +F+ MK A ++P + T V V+SACSH GL+D+G   F SM   YG+
Sbjct: 468 AGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGV 527

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P+   Y C++D+L R G LE+A+ +I  MPFQP    + +LL   RIHGN ELGE A+E
Sbjct: 528 IPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAE 587

Query: 744 KLLLLLPKNDAAHVLLS 760
            +  + P+N   +VLLS
Sbjct: 588 MVFKMEPQNSGMYVLLS 604



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 4/286 (1%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N +I  Y + G      + FD M +R+ VSW  I++   Q+G ++  L M+V++K +G  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            N    G  +  C  + A E G  IH  A+K+      FVG ++L  Y K G +  A   
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           F  I   DV  WN M+ GYA  G+G +AL V  SM   G+  D+ T +  L  CS     
Sbjct: 452 FEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511

Query: 263 DIGRQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
           D G +  + +     V  +      +ID+  ++  ++ A  +   M       SW  L G
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLG 571

Query: 321 G--FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
                 N   G+ A+     +   +   +V  S L    G+ +D D
Sbjct: 572 ASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDAD 617


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 280/576 (48%), Gaps = 37/576 (6%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YA LG++  A ++F      +   W++++ GY   G   E L   S M  +G    
Sbjct: 74  MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +YT  + L+ CS ++    G+ IH   I+ ++E +I +   L+DMY K   +  A  +F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 306 RMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            + D K+ + W  +  G+++N    +    F +    G   NH TF  +L  C  +    
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+    +  GF     V S+L+ M+ +CG +  A  + D +   ++  WN ++ G  
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L  F  +    + ++  T+  V+++    +N ++   +H   IKTGF +C  
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G L  + +  N     D+ SW ++++  VH G + +A+ +F  +  A 
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
              D++++  + ++CA +   +  + +H   IK    + +   +++I  YAKCG ++ A 
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAI 493

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
             FD S  + +VI +  +I+ YA +GL                                 
Sbjct: 494 RVFD-SMETRNVISWTAIIVGYAQNGL--------------------------------- 519

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
             V+ G   F+SM+  YG++P+ D Y C++D+L R G + +A+H++  M  +P  T+++S
Sbjct: 520 --VETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKS 577

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS CR+HGN ELGE A + L+ L P N   +VLLS
Sbjct: 578 LLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLS 613



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 235/472 (49%), Gaps = 2/472 (0%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D +  N +I+ Y+  G      ++F+E   +N ++W+ +VS   +NG    GL+ +  M 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           ++G  P+++ +GSV++ C ++     G  IHC+A+KI++E N FV   +++ Y+K   + 
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186

Query: 198 AAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            AE +F+S+    +   W AM+ GYA  G   +A+     M  +G+  + +TF + L  C
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++ +  GRQ+HG II S    ++ + +AL+DMY K   +  A  + + M   DV+ WN
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           ++  G   +    +   LFHK      R +  T+  +L+      +L +G  +  L +  
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF   + V+++L+ M+ + G +  A  VF+ +  K++ +W  L++GY  N      L+ F
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
           C++  + V+++      V   C      +   Q+H   IK+   S     +SLI  Y   
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA-GEKP 547
           G L+++    +  E  ++ SW A++      G      + F S+ +  G KP
Sbjct: 487 GCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP 538



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 185/370 (50%), Gaps = 11/370 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
           G  +H + +K+    +IF+   L+ MYSKC        +F  + +R N V WT +++   
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNGE    ++ + +M+  G   N F   S++  C S+ A  FG  +H   +      N +
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVY 272

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK GD+A+A  +  ++  DDV CWN+MI G    GY  EAL +   M    
Sbjct: 273 VQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRD 332

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I +D +T+ + L+  +   +  IG  +H L I++  +   ++ NAL+DMY K   +  A 
Sbjct: 333 IRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF ++ DKDVISW +L  G+  N    +   LF     +    +    + +   C +L 
Sbjct: 393 DVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELT 452

Query: 362 DLDLGLQLQCLALHCGFLDEE-----NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            ++ G Q     +H  F+        +  +SLI M+ +CG +E A  VFD++  +N+ +W
Sbjct: 453 VIEFGRQ-----VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISW 507

Query: 417 NELLSGYCFN 426
             ++ GY  N
Sbjct: 508 TAIIVGYAQN 517



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 139/275 (50%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+   ++ +   G QVHG I+  GF  ++++Q+ L+ MY+KCG       + D M   ++
Sbjct: 243 LTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDV 302

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W  ++   + +G  +  L ++  M       ++F   SV+K   S    + G S+H  
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K   +    V  ++++ YAK G+++ A  VF  I   DV  W +++ GY H G+  +A
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M    + +D++        C+ +   + GRQ+H   I+S     +S  N+LI M
Sbjct: 423 LQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITM 482

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           Y K   ++ A +VF+ M  ++VISW  +  G+++N
Sbjct: 483 YAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN 517



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 36/352 (10%)

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE-------------------------- 418
           ++ L+    + G V+ A  +FD + Y++  TWN                           
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKNS 99

Query: 419 -----LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
                L+SGYC N C+ + L+ F  +W  G + +  T   V+  C           IH  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 474 IIKTGFSSCGYICSSLIKSYVNFG-QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            IK    +  ++ + L+  Y      L+  + F +  +R +   W AM++     G + +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+  F  +   G + + +   +IL +C +I AY   + +H  +I  GF   VYV SA++D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCGD+  ARM  D +   +DV+ +N++I+    HG + EA+ +F KM   +++    
Sbjct: 280 MYAKCGDLASARMILD-TMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDF 338

Query: 653 TFVSVM-SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           T+ SV+ S  S K L  K      S+  + G          LVDM ++ G L
Sbjct: 339 TYPSVLKSLASCKNL--KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNL 388



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 123/258 (47%), Gaps = 12/258 (4%)

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y  + +I +Y N G L  + +  N     +  +W +++S     G   E +  F  +   
Sbjct: 69  YTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G+KP +Y LG++L +C+ +      K IH + IK+     ++VA+ ++D Y+KC  +  A
Sbjct: 129 GQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEA 188

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F    +  + + +  ++  YA +G   +A++ F +M+   ++ +  TF S+++AC+ 
Sbjct: 189 EYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTS 248

Query: 664 K-----GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
                 G    GC+++       G  P+      LVDM ++ G L  A+ +++ M     
Sbjct: 249 ISAYAFGRQVHGCIIWS------GFGPNVYVQSALVDMYAKCGDLASARMILDTMEID-D 301

Query: 719 PTVYRSLLSGCRIHGNKE 736
              + S++ GC  HG  E
Sbjct: 302 VVCWNSMIVGCVTHGYME 319



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 3/177 (1%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           KSL+  +NLK   +G  VH   +K GF     + N L+ MY+K G     L VF+++ ++
Sbjct: 345 KSLASCKNLK---IGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           +++SWT +V+  + NG  +  L+++ DM+T     ++F V  V   C  +   EFG  +H
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
              +K           S++  YAK G +  A RVF S+ + +V  W A+I GYA  G
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNG 518



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 1/83 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVH + +K    + +  +N+LI MY+KCG     +RVFD M  RN++SWT I+    
Sbjct: 456 FGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYA 515

Query: 122 QNGEFDMGLKMYVDM-KTNGFMP 143
           QNG  + G   +  M K  G  P
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKP 538


>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 265/523 (50%), Gaps = 37/523 (7%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGF 322
           R IH  +I++ +  +   ++ LI+  + S    G+ YA  VFE + + +++ WNT+F G 
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + + +P     L+   I  G  PN  TF  LL+ C K      G Q+    L  G+  + 
Sbjct: 64  ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDN------VSY-------------------------K 411
            V +SLI M+ + G +E A  VFD       VSY                         K
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 183

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++ +WN ++SGY       + L+ F ++ ++ V  +  T   VV  C +S + ++  Q+H
Sbjct: 184 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 243

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I   GF S   I ++LI  Y   G+++ +     G    D+ SW  ++    H     
Sbjct: 244 LWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASA 589
           EA+ +F  ++ +GE P++  + +IL +CA +GA    + IH ++ K   G      + ++
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS 363

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           +ID YAKCGDI+ A+  FD S  +  +  +N +I  +A HG  + A ++F KM+   + P
Sbjct: 364 LIDMYAKCGDIEAAKQVFD-SMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDP 422

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
              TFV ++SACSH G++D G  +F+SM   Y + P  + YGC++D+L   G  ++AK +
Sbjct: 423 DDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM 482

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
           I  MP +P   ++ SLL  C++H N ELGE  ++ L+ + P+ 
Sbjct: 483 IRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPET 525



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 200/432 (46%), Gaps = 36/432 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG---WGLRVFDEMAERNLVSWTLIVSAAIQ 122
           +H  ++K G  N  +  + LI       +F    + + VF+ + E NL+ W  +      
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           + +    L +YV M + G +PN +    ++K C    A   G  IH   LK+  + + +V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 183 GCSVLNFY-------------------------------AKLGDVAAAERVFYSISSDDV 211
             S+++ Y                               A  G +  A+++F  I   DV
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 185

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WNAMI GYA  G   EAL +   M+   +  D+ T +  +  C+     ++GRQ+H  
Sbjct: 186 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 245

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           I       ++ IVNALID+Y K   ++ A  +FE ++ KDVISWNTL GG++      + 
Sbjct: 246 IDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL--ALHCGFLDEENVTSSLI 389
             LF + + SG  PN VT   +L  C  L  +D+G  +         G  +  ++ +SLI
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLI 365

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ +CG +E A  VFD++  +++++WN ++ G+  +         F  + ++G++ +  
Sbjct: 366 DMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDI 425

Query: 450 TFFYVVETCCRS 461
           TF  ++  C  S
Sbjct: 426 TFVGLLSACSHS 437



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 170/354 (48%), Gaps = 36/354 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAM----------------- 88
           FL KS + S+  +    G Q+HGH++KLG+  D+++  +LI+M                 
Sbjct: 93  FLLKSCAKSKAFRE---GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149

Query: 89  --------------YSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                         Y+  GY     ++FDE+  +++VSW  ++S   + G +   L+++ 
Sbjct: 150 SHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 209

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           DM      P+E  + +V+  C   G+ E G  +H +        N  +  ++++ Y+K G
Sbjct: 210 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 269

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G + +  T ++ L 
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    V  + S++ +LIDMY K   ++ A +VF+ M  + +
Sbjct: 330 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 389

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
            SWN +  GF+ +        LF K   +G  P+ +TF  LL  C     LDLG
Sbjct: 390 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG 443



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 116/231 (50%), Gaps = 2/231 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   +   +S      S  LG QVH  I   GF +++ + N LI +YSKCG      
Sbjct: 216 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETAC 275

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+ ++ ++++SW  ++        +   L ++ +M  +G  PN+  + S++  C  +G
Sbjct: 276 GLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLG 335

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +     +  S+++ YAK GD+ AA++VF S+ +  +  WNAM
Sbjct: 336 AIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 395

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           I G+A  G    A ++ S M   GI  D  TF+  L  CS     D+GR I
Sbjct: 396 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 446


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 165/696 (23%), Positives = 345/696 (49%), Gaps = 11/696 (1%)

Query: 47   LAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
            + + + L  +  S  L +Q+H H++  G    D      LI  Y+  G       VF+  
Sbjct: 559  MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 618

Query: 106  AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--- 162
               +   + +++   +     D  + +Y  + +     ++F   SV++ C   G+ E   
Sbjct: 619  PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACA--GSREHLS 676

Query: 163  FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
             G  +H   +K  ++ +  +  S+L  Y + G+++ AE+VF  +   D+  W+ ++    
Sbjct: 677  VGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 736

Query: 223  HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                  +AL +   M+ +G+  D  T I+ ++GC+ +    I R +HG I R   +   +
Sbjct: 737  ENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDET 796

Query: 283  IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
            + N+L+ MY K   +  + K+FE++A K+ +SW  +   ++  +   +    F + + SG
Sbjct: 797  LCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSG 856

Query: 343  SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMA 401
              PN VT   +L  CG    +  G  +   A+      + E+++ +L+ ++  CG +   
Sbjct: 857  IEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDC 916

Query: 402  HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             ++   V  +NI  WN  +S Y       + L  F  +    ++ +  T   ++  C  +
Sbjct: 917  ETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENT 976

Query: 462  ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
               ++  QIHG +I+T  S   ++ +S+I  Y   G ++ +    +  +   + +W +M+
Sbjct: 977  GLVRLGKQIHGHVIRTDVSD-EFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSML 1035

Query: 522  SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
                  G++ EA+ +F  +  +  + ++     ++ +C++IG+ ++ + +H  +I  G  
Sbjct: 1036 CGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGIK 1095

Query: 582  TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             +++  +A+ID YAKCGD+  A   F ++ ++  ++ ++++I AY  HG +  A+  F++
Sbjct: 1096 -DLFTDTALIDMYAKCGDLNTAETVF-RAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQ 1153

Query: 642  MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
            M  +  +P++  F++V+SAC H G V++G   F  M   +G+ P+ + + C +D+LSR+G
Sbjct: 1154 MVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVSPNSEHFACFIDLLSRSG 1212

Query: 702  YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
             L++A   I+ MPF    +V+ SL++GCRIH   ++
Sbjct: 1213 DLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDI 1248



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 7/285 (2%)

Query: 40   LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            ++ D   LA  +S  EN     LG Q+HGH+++   +++ F+QN++I MYSK G+     
Sbjct: 959  IKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDE-FVQNSVIDMYSKSGFVNLAC 1017

Query: 100  RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
             VFD++  R++V+W  ++    QNG     + ++  M  +    N+    +V++ C S+G
Sbjct: 1018 TVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIG 1077

Query: 160  ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            + E G  +H   +   I K+ F   ++++ YAK GD+  AE VF ++S+  +  W++MI 
Sbjct: 1078 SLEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMIN 1136

Query: 220  GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
             Y   G    A++  + M+  G   ++  F+N L  C      + G+    L+    V  
Sbjct: 1137 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSP 1196

Query: 280  SISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGG 321
            +       ID+  +S  +  A++  + M   AD  V  W +L  G
Sbjct: 1197 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNG 1239


>gi|302768233|ref|XP_002967536.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
 gi|300164274|gb|EFJ30883.1| hypothetical protein SELMODRAFT_87961 [Selaginella moellendorffii]
          Length = 751

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 189/712 (26%), Positives = 326/712 (45%), Gaps = 31/712 (4%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVD 135
            D    N L+    + G     L +F   A R +++SW+ +++A  +NG+    L +   
Sbjct: 47  QDEVFANGLLQNLVRDGALEEALNLFQATAHRWDVISWSCLIAANSRNGDSRAALSLLRS 106

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M  +G  PN+  + S             G  +H  AL+    ++  +  ++LN Y K G 
Sbjct: 107 MLLHGVPPNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGL 166

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           +   E +F  I   +   W A+I      G    AL + S+ML +G+  D  T +     
Sbjct: 167 LNRMEAIFEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVTLLTMANA 226

Query: 256 CSLVADFDIGRQIHGLIIRSEVECS--ISIVNALIDMYIKSSGMDYAFKVFERMA-DKDV 312
           CS +      R+IH LI  S  + S  + + NA+IDMY +      A   F+ MA  +D 
Sbjct: 227 CSRMGSIQAARRIHRLIEESGFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIRDD 286

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR---------QCGKLLDL 363
           +SWN++ G  + N    +   +FH+ +L G  P  VTF  +L             + ++L
Sbjct: 287 VSWNSMIGALARNGEAIEAIVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSLTAHRSIEL 346

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
             G Q+Q   L C  L    + + LI    R   +E A  +F       ++  W  +++ 
Sbjct: 347 VHG-QIQSRGLECDAL----IAAGLIPTLARINRLEEATRIFHGARDCHDVVLWTTIIAA 401

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y       + +  F  +   G   NG +   V+E+CC   +  ++      +I  G SS 
Sbjct: 402 YAQKDRPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIADGILLESCAREMISRGRSSL 461

Query: 483 GY---ICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
                + +SL+  +   G + D S  FS   ER D  SW +M+ AL       EA+ I+ 
Sbjct: 462 PMDVIVENSLLSMFSRCGSIEDTSRIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYR 521

Query: 539 SLVEAGEKPDEYILGTILNSCA----AIGAYQRTKSIH--PFVIKLGFNTEVYVASAVID 592
            ++  G  P++      L++C+          R  S+     +++ G  ++  V +A++ 
Sbjct: 522 KMLLHGVGPEKITFVAALDACSKSSDGSAPADRAASLEICALILEAGHGSDTAVGAAMVA 581

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            + K G+   A    D   +  D+  ++ ++ AYA H    EA+  F +M L  ++ +  
Sbjct: 582 IHGKHGEFDRAMECMD-GIHKKDIFAWSAMVSAYAQHERCVEAIGFFREMVLDGVEANDV 640

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
            FV+V+SA  H G +++ C  F  ++ ++GM+PS   YGC++DMLSR G+L +A  V+E 
Sbjct: 641 IFVTVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAGHLAEAVSVMEQ 700

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
           MP Q   T + S+L GCR++G+ + G   +  L+   P N +A+V L+   R
Sbjct: 701 MPSQDRVT-WMSVLGGCRLYGDPQQGNKMARTLIGSNPDNASAYVALTNIYR 751



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/611 (23%), Positives = 271/611 (44%), Gaps = 40/611 (6%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
            + I L  + + + + K    G  VH   ++ G+  D+ L + L+ MY K G       +
Sbjct: 114 PNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGLLNRMEAI 173

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F+++ ERN +SWT +++A  ++G+    L+++  M  +G +P+   + ++   C  MG+ 
Sbjct: 174 FEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVTLLTMANACSRMGSI 233

Query: 162 EFGYSIHCFALKIRIEKNPF-------VGCSVLNFYAKLGDVAAAERVFYSIS--SDDVG 212
           +    IH       IE++ F       +  ++++ Y + G  + A   F S++   DDV 
Sbjct: 234 QAARRIHRL-----IEESGFDRSRALMLANAIIDMYGECGSTSCARAAFDSMAMIRDDVS 288

Query: 213 CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG-----CSLVADFDIGRQ 267
            WN+MIG  A  G   EA+ +   ML +GI   K TF+  L        SL A   I   
Sbjct: 289 -WNSMIGALARNGEAIEAIVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSLTAHRSI-EL 346

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENK 326
           +HG I    +EC   I   LI    + + ++ A ++F    D  DV+ W T+   +++  
Sbjct: 347 VHGQIQSRGLECDALIAAGLIPTLARINRLEEATRIFHGARDCHDVVLWTTIIAAYAQKD 406

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL------HCGFLD 380
            P +  + F + +L G   N  +   +L  C  + D   G+ L+  A             
Sbjct: 407 RPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIAD---GILLESCAREMISRGRSSLPM 463

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSGYCFNCCDADVLKTFCNI 439
           +  V +SL+ MF RCG++E    +F  +  +  T +WN ++     +    + L  +  +
Sbjct: 464 DVIVENSLLSMFSRCGSIEDTSRIFSGMDERQDTVSWNSMIVALSQHDRPGEALAIYRKM 523

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVG------QIHGAIIKTGFSSCGYICSSLIKSY 493
              GV     TF   ++ C +S +           +I   I++ G  S   + ++++  +
Sbjct: 524 LLHGVGPEKITFVAALDACSKSSDGSAPADRAASLEICALILEAGHGSDTAVGAAMVAIH 583

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G+ D + E  +G  + D+ +W AM+SA        EA+  F  +V  G + ++ I  
Sbjct: 584 GKHGEFDRAMECMDGIHKKDIFAWSAMVSAYAQHERCVEAIGFFREMVLDGVEANDVIFV 643

Query: 554 TILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
           T+L++    G+ +   +      ++ G    +     VID  ++ G +  A    +Q   
Sbjct: 644 TVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAGHLAEAVSVMEQ-MP 702

Query: 613 SNDVIVYNTLI 623
           S D + + +++
Sbjct: 703 SQDRVTWMSVL 713


>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 558

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/501 (31%), Positives = 269/501 (53%), Gaps = 8/501 (1%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFS 323
           +Q+H  +I    +  + + ++L + YI+S+ +D+A   F+R+    ++  SWNT+  G+S
Sbjct: 24  QQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGYS 83

Query: 324 ENKN--PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           ++K+        L+++        +       ++ C  L  L+ G+ +  LA+  G   +
Sbjct: 84  KSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGMLIHGLAMKNGLDKD 143

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
           + V  SL+ M+ + G +E A  VFD +  +N   W  L+ GY     D++V + F  + +
Sbjct: 144 DYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSKDSEVFRLFYLMRD 203

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SSCGYICSSLIKSYVNFGQLD 500
           +G+ ++  T   +V+ C      +    +HG  I+  F    GY+ +S+I  YV    LD
Sbjct: 204 TGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLLD 263

Query: 501 NSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           N+ + F    ER ++  W  ++S         EA+ +F  ++     P+   L  IL SC
Sbjct: 264 NARKLFETSVER-NVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSC 322

Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +++G+ +  KS+H ++I+ G   +    ++ ID YA+CG+I+ AR  FD     N VI +
Sbjct: 323 SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRN-VISW 381

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDS 679
           +++I A+  +GL  EA++ FD MK  NL P+  TFVS++SACSH G V +G   F+SM  
Sbjct: 382 SSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441

Query: 680 QYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGE 739
            YG+ P  + Y C+VD+L R G + +AK  I+ MP +P  + + +LLS CRIH   +L  
Sbjct: 442 DYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAG 501

Query: 740 WASEKLLLLLPKNDAAHVLLS 760
             +EKLL + P   + +VLLS
Sbjct: 502 EIAEKLLSMEPDESSVYVLLS 522



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 241/521 (46%), Gaps = 15/521 (2%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA--ER 108
           LS+    K+     QVH  ++  GF +++ L ++L   Y +     +    FD +   +R
Sbjct: 11  LSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKR 70

Query: 109 NLVSWTLIVSAAIQNGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           N  SW  I+S   ++    +   L +Y  M+ +    + F +   +K CV +G  E G  
Sbjct: 71  NRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGML 130

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH  A+K  ++K+ +V  S++  YA+ G + +A++VF  +   +   W  ++ GY     
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSK 190

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEVECSISIVN 285
             E   +   M   G+ +D  T I  ++ C  V+    G+ +HGL I RS ++ S  +  
Sbjct: 191 DSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA 250

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           ++IDMY+K   +D A K+FE   +++V+ W TL  GF++ +   +   LF + +     P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILP 310

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSV 404
           NH T + +L  C  L  L  G  +    +  G  +D  N T S I  + RCG ++MA  V
Sbjct: 311 NHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SFIDTYARCGNIQMARKV 369

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN- 463
           FD +  +N+ +W+ +++ +  N    + L  F N+    +  N  TF  ++  C  S N 
Sbjct: 370 FDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNV 429

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-WGAMMS 522
           ++   Q        G        + ++      G++  +  F +      MAS WGA++S
Sbjct: 430 KEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489

Query: 523 ALVHQGHNHEAVTIFHSLVEA--GEKPDEYILGTILNSCAA 561
           A       H+ V +   + E     +PDE  +  +L++  A
Sbjct: 490 AC----RIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYA 526



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 108/222 (48%), Gaps = 1/222 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDI-FLQNNLIAMYSKCGYF 95
           D+ L  D + L   +    N+ +   G  VHG  ++  F +   +L+ ++I MY KC   
Sbjct: 203 DTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEASIIDMYVKCRLL 262

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
               ++F+   ERN+V WT ++S   +       + ++  M     +PN   + +++  C
Sbjct: 263 DNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILPNHCTLAAILVSC 322

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            S+G+   G S+H + ++  IE +     S ++ YA+ G++  A +VF  +   +V  W+
Sbjct: 323 SSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISWS 382

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +MI  +   G   EAL+   +M  + +  +  TF++ L  CS
Sbjct: 383 SMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACS 424



 Score = 47.4 bits (111), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 4/154 (2%)

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSNDVIVYNTLIMAY 626
           T+ +H  VI  GF  EV + S++ +AY +   +  A  +FD+      +   +NT++  Y
Sbjct: 23  TQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKRNRHSWNTILSGY 82

Query: 627 AHHG--LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
           +       S+ + ++++M+           V  + AC   GL++ G +L   +  + G+ 
Sbjct: 83  SKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG-MLIHGLAMKNGLD 141

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
                   LV+M ++ G +E A+ V + MP + S
Sbjct: 142 KDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNS 175


>gi|302799934|ref|XP_002981725.1| hypothetical protein SELMODRAFT_115145 [Selaginella moellendorffii]
 gi|300150557|gb|EFJ17207.1| hypothetical protein SELMODRAFT_115145 [Selaginella moellendorffii]
          Length = 716

 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 190/723 (26%), Positives = 328/723 (45%), Gaps = 45/723 (6%)

Query: 80  FLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
            L N L+ MY KCG     L +F   A R +++SW+ +++   +NG+    L +   M  
Sbjct: 1   MLGNALVNMYGKCGTLEEALNLFQATAHRWDVISWSCLIAGNSRNGDSRAALSLLRSMLL 60

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           +G  PN+  + S             G  +H  AL+    ++  +  ++LN Y K G +  
Sbjct: 61  HGVPPNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGLLDR 120

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
            E +F  I   +   W A+I      G    AL + S+ML +G+  D    +     CS 
Sbjct: 121 MEAIFEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVALLTMANACSR 180

Query: 259 VADFDIGRQIHGLIIRS----------------EVECSISIVNALIDMYIKSSGMDYAFK 302
           +      R+IH LI  S                +   ++ + NA+IDMY +      A  
Sbjct: 181 MGSIQAARRIHRLIEESGFLLLLEAGSSPTGSFDRSRALMLANAIIDMYGECGSTSCARA 240

Query: 303 VFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR------ 355
            F+ MA  +D +SWN++ G  + N    +   +FH+ +L G  P  VTF  +L       
Sbjct: 241 AFDSMAMIRDDVSWNSMIGALARNGEAIKATVIFHRMLLDGIHPTKVTFLEILHAFSQSH 300

Query: 356 ---QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-K 411
                 +L++L  G Q+Q   L C  L    + + LI    R   +E A  +F       
Sbjct: 301 SSLTAHRLIELVHG-QIQSRGLECDAL----IAAGLIPALARINRLEEATRIFHGARDCH 355

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           ++  W  +++ Y       + +  F  +   G   NG +   V+E+CC   +  ++    
Sbjct: 356 DVVLWTTIIAAYAQKDRPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIADGILLESCA 415

Query: 472 GAIIKTGFSSCGY---ICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQ 527
             +I  G SS      + +SL+  +   G + D S  FS   ER D  SW +M+ AL   
Sbjct: 416 REMISRGRSSLPMAVIVENSLLSMFSRCGSIEDASRIFSGMDERQDTVSWNSMIVALSQH 475

Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK------SIHPFVIKLGFN 581
               EA+ I+  ++  G +P++      L++C+       +        I   +++ G  
Sbjct: 476 DRPGEALAIYRKMLLHGVRPEKITFVAALDACSKSSDASASANRAASLEICALILEAGHG 535

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
           ++  V +A++  + K G+   A    D   +  D+  ++ ++ AYA H    EA+  F +
Sbjct: 536 SDTAVGAAMVAIHGKHGEFDRAMECMD-GIHKKDIFAWSAMVSAYAQHERCVEAIAFFRE 594

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
           M L  ++ +   FV+V+SA  H G +++ C  F  ++ ++GM+PS   YGC++DMLSR G
Sbjct: 595 MVLDGVEANDVIFVTVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAG 654

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           +L +A  V+E MP Q   T + S+L GCR++G+ + G   +  L+   P N +A+V L+ 
Sbjct: 655 HLAEAVSVMEQMPSQDRVT-WMSVLGGCRLYGDPQQGNKMARTLIGSNPDNASAYVALTN 713

Query: 762 RKR 764
             R
Sbjct: 714 IYR 716



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/619 (22%), Positives = 272/619 (43%), Gaps = 42/619 (6%)

Query: 42  KDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRV 101
            + I L  + + + + K    G  VH   ++ G+  D+ L + L+ MY K G       +
Sbjct: 65  PNKITLISAATAAAHSKIPAEGEFVHDLALQGGWIRDLALSSALLNMYGKYGLLDRMEAI 124

Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
           F+++ ERN +SWT +++A  ++G+    L+++  M  +G +P+  A+ ++   C  MG+ 
Sbjct: 125 FEQIEERNPISWTAVIAANTKSGDLPRALELFSAMLLDGVLPDAVALLTMANACSRMGSI 184

Query: 162 EFGYSIH------CFALKIRIEKNP----------FVGCSVLNFYAKLGDVAAAERVFYS 205
           +    IH       F L +    +P           +  ++++ Y + G  + A   F S
Sbjct: 185 QAARRIHRLIEESGFLLLLEAGSSPTGSFDRSRALMLANAIIDMYGECGSTSCARAAFDS 244

Query: 206 IS--SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL----QGCSLV 259
           ++   DDV  WN+MIG  A  G   +A  +   ML +GI   K TF+  L    Q  S +
Sbjct: 245 MAMIRDDVS-WNSMIGALARNGEAIKATVIFHRMLLDGIHPTKVTFLEILHAFSQSHSSL 303

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTL 318
               +   +HG I    +EC   I   LI    + + ++ A ++F    D  DV+ W T+
Sbjct: 304 TAHRLIELVHGQIQSRGLECDALIAAGLIPALARINRLEEATRIFHGARDCHDVVLWTTI 363

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
              +++   P +  + F + +L G   N  +   +L  C  + D   G+ L+  A     
Sbjct: 364 IAAYAQKDRPREAMAFFRRMLLEGFLANGYSIVAVLESCCSIAD---GILLESCAREMIS 420

Query: 379 LDEEN------VTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSGYCFNCCDAD 431
               +      V +SL+ MF RCG++E A  +F  +  +  T +WN ++     +    +
Sbjct: 421 RGRSSLPMAVIVENSLLSMFSRCGSIEDASRIFSGMDERQDTVSWNSMIVALSQHDRPGE 480

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG------QIHGAIIKTGFSSCGYI 485
            L  +  +   GV     TF   ++ C +S +           +I   I++ G  S   +
Sbjct: 481 ALAIYRKMLLHGVRPEKITFVAALDACSKSSDASASANRAASLEICALILEAGHGSDTAV 540

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
            ++++  +   G+ D + E  +G  + D+ +W AM+SA        EA+  F  +V  G 
Sbjct: 541 GAAMVAIHGKHGEFDRAMECMDGIHKKDIFAWSAMVSAYAQHERCVEAIAFFREMVLDGV 600

Query: 546 KPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
           + ++ I  T+L++    G+ +   +      ++ G    +     VID  ++ G +  A 
Sbjct: 601 EANDVIFVTVLSALGHAGSIEECCRYFGGLEVEFGMRPSLPHYGCVIDMLSRAGHLAEAV 660

Query: 605 MAFDQSFNSNDVIVYNTLI 623
              +Q   S D + + +++
Sbjct: 661 SVMEQ-MPSQDRVTWMSVL 678


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 253/477 (53%), Gaps = 5/477 (1%)

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR--PNHVTFS 351
           S G+ YA+ VF      DV++WN++   F  +  P +    + + +L  SR  P+  TF 
Sbjct: 25  SLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTE-MLERSRNVPDRFTFP 83

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            LL+ C  LL+  +G  L    +      +  + ++L+ M+  CG ++ A  +F+ + ++
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR 143

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           N   W  ++SGY  N C  + L  +  + E G   +  T   +V  C   ++  +  ++H
Sbjct: 144 NKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLH 203

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
             I +     C  + S+L+  Y   G L  + +  +     D+ +W A++   V    + 
Sbjct: 204 SHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRST 263

Query: 532 EAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA+ +F  +      +P+E  +  ++++CA +G  +  + +H ++ +      V + +++
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID ++KCGDI  A+  FD S +  D+I +N+++   A HGL  EA+  F  M+  +LQP 
Sbjct: 324 IDMFSKCGDIDAAKRIFD-SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPD 382

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
           + TF+ V++ACSH GLV +G  LF  +++ YG++   + YGC+VD+L R G L +A+  I
Sbjct: 383 EITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFI 442

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQRE 767
            +MP QP   ++ S+L  CR++ N ELGE A+  LL L P ND  ++LLS    +R+
Sbjct: 443 RVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRK 499



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 124/522 (23%), Positives = 235/522 (45%), Gaps = 17/522 (3%)

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTFINALQ 254
           V  A  VF      DV  WN+M+  + +      AL   + ML     + D++TF + L+
Sbjct: 28  VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           GC+L+ +F +G+ +HG +++  +   + I   L++MY     +  A  +FERM  ++ + 
Sbjct: 88  GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           W ++  G+ +N  P +   L+ K    G  P+ VT + L+  C +L DL +G++L     
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHS--- 204

Query: 375 HCGFLDEE---NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
           H   +D +    + S+L+ M+ +CG ++ A  VFD +S K++  W+ L+ GY  N    +
Sbjct: 205 HIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTE 264

Query: 432 VLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
            L+ F  +   S +  N  T   V+  C +  + +    +H  I +T       + +SLI
Sbjct: 265 ALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLI 324

Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
             +   G +D +    +     D+ SW +M++ L   G   EA+  FH +     +PDE 
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEI 384

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
               +L +C+  G  Q  K +   +  L G   +      ++D   + G +  AR     
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444

Query: 610 SFNSNDVIVYNTLIMA---YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
                D  ++ +++ A   Y +  L  EA        L  L+P+      ++S    +  
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARC-----LLELEPTNDGVYILLSNIYARRK 499

Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKH 708
           +       + + ++ G+Q +P C   ++D ++ +    D  H
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSH 541



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 178/343 (51%), Gaps = 4/343 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  +HG +VK    +D++++  L+ MY+ CG       +F+ M  RN V WT ++S  +
Sbjct: 97  VGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYM 156

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +N   +  L +Y  M+ +GF P+E  + +++  C  +     G  +H    ++ ++    
Sbjct: 157 KNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAV 216

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FE 240
           +G +++N YAK GD+  A +VF  +S  DV  W+A+I GY       EAL +   +    
Sbjct: 217 LGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +  ++ T +  +  C+ + D + GR +H  I R++   S+S+ N+LIDM+ K   +D A
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F+ M+ KD+ISWN++  G + +    +  + FH    +  +P+ +TF  +L  C   
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396

Query: 361 LDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             +  G +L  +  AL+   L  E+    ++ + CR G +  A
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHY-GCMVDLLCRAGLLAEA 438



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 222/464 (47%), Gaps = 14/464 (3%)

Query: 70  IVKLGFTNDIFLQNNLIAMYSKCGYFGWGL--RVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           +V  GF +     N LIA     G  G G    VF      ++++W  ++ A + +    
Sbjct: 1   MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60

Query: 128 MGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
             L+ Y +M + +  +P+ F   S++K C  +   + G  +H   +K  +  + ++  ++
Sbjct: 61  RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           LN YA  GD+ +A  +F  +   +   W +MI GY       EAL +   M  +G + D+
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
            T    +  C+ + D  +G ++H  I   +++    + +AL++MY K   +  A +VF++
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLD 364
           ++DKDV +W+ L  G+ +N    +   LF + +  GS  RPN VT   ++  C +L DL+
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFRE-VAGGSNMRPNEVTILAVISACAQLGDLE 299

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G  +             ++ +SLI MF +CG ++ A  +FD++SYK++ +WN +++G  
Sbjct: 300 TGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLA 359

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIHGAIIKTGFS 480
            +    + L  F  +  + ++ +  TF  V+  C  +    E +++  +I  A+      
Sbjct: 360 LHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIE-ALYGVRLK 418

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           S  Y C  ++      G L  + EF      + D A WG+M+ A
Sbjct: 419 SEHYGC--MVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 126/242 (52%), Gaps = 8/242 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +A  +S    LK   +G ++H HI ++       L + L+ MY+KCG      +VF
Sbjct: 179 DEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVF 238

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGAS 161
           D+++++++ +W+ ++   ++N      L+++ ++     M PNE  + +V+  C  +G  
Sbjct: 239 DQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDL 298

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
           E G  +H +  + +   +  +  S+++ ++K GD+ AA+R+F S+S  D+  WN+M+ G 
Sbjct: 299 ETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGL 358

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ-------IHGLIIR 274
           A  G G EAL     M    +  D+ TFI  L  CS       G++       ++G+ ++
Sbjct: 359 ALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLK 418

Query: 275 SE 276
           SE
Sbjct: 419 SE 420



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 11/201 (5%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R + + +   +S    L     G  VH +I +    + + L N+LI M+SKCG    
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             R+FD M+ ++L+SW  +V+    +G     L  +  M+T    P+E     V+  C  
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSH 395

Query: 158 MGASEFG----YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVG 212
            G  + G    Y I      +R+ K+   GC V +   + G +A A      +    D  
Sbjct: 396 AGLVQEGKKLFYEIEAL-YGVRL-KSEHYGCMV-DLLCRAGLLAEAREFIRVMPLQPDGA 452

Query: 213 CWNAMIGG---YAHCGYGFEA 230
            W +M+G    Y +   G EA
Sbjct: 453 IWGSMLGACRVYNNLELGEEA 473


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/534 (31%), Positives = 276/534 (51%), Gaps = 9/534 (1%)

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL ++ S+    I+     + + LQ C+ V  F+ G QIH  +I+S +E    + N+L+ 
Sbjct: 43  ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102

Query: 290 MYIKSSGMDY--AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +Y K  G D+    KVF+ +  KDVISW ++  G+     P  +  LF K +  G  PN 
Sbjct: 103 LYFKL-GTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNA 161

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T S +++ C +L DL LG     + L  GF     + S+LI M  R  A++ A  +FD 
Sbjct: 162 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQM 466
           +   +   W  ++S    N    + L+ F ++  + G+  +G TF  V+  C      + 
Sbjct: 222 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 281

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             ++H  +I TGF     + SSL+  Y   G +  S    +     +  SW A++     
Sbjct: 282 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 341

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G     + IF  +    EK D Y  GTIL +CA + A ++ K +H   I+ G   +V V
Sbjct: 342 NGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIV 397

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            SA++D YAKCG I+ A+  FDQ     ++I +N++I  +A +G   EA+ IF++M    
Sbjct: 398 ESALVDLYAKCGCIEYAQTIFDQ-MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEG 456

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           ++P   +F+ ++ ACSH+GLVD+G   F SM   YG++   + Y C+VD+L R G LE+A
Sbjct: 457 IKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEA 516

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + +IE   F+   +++ +LL  C    N E+ E  +++++ L P    ++VLL+
Sbjct: 517 EILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLA 570



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 228/507 (44%), Gaps = 7/507 (1%)

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++GE    L++   +             S+++ C  + A   G  IH   +K  +E + F
Sbjct: 36  KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95

Query: 182 VGCSVLNFYAKLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           VG S+L  Y KLG D     +VF  +   DV  W +MI GY   G    +L +   ML  
Sbjct: 96  VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 155

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  + +T    ++ CS + D  +GR  HG+++    + +  I +ALIDM+ ++  +D A
Sbjct: 156 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 215

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGK 359
            ++F+ + + D I W ++    + N    +    F+      G  P+  TF  +L  CG 
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 275

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L  G ++    +  GF     V SSL+ M+ +CG+V  +  +FD +  KN  +W+ L
Sbjct: 276 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 335

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L GYC N       K+   I+    +V+   F  ++ TC      +   ++H   I+ G 
Sbjct: 336 LGGYCQN----GDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 391

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + S+L+  Y   G ++ +    +     ++ +W +M+      G   EA+ IF+ 
Sbjct: 392 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 451

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCG 598
           +V+ G KPD      IL +C+  G     +     + K  G    +   S ++D   + G
Sbjct: 452 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 511

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMA 625
            ++ A +  + S   +D  ++  L+ A
Sbjct: 512 LLEEAEILIETSDFRDDSSLWAALLGA 538



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 207/417 (49%), Gaps = 6/417 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY-FGWGLRVF 102
           P+  A  L     + +   G Q+H H++K G   D F+ N+L+ +Y K G  F    +VF
Sbjct: 59  PVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVF 118

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +  ++++SWT ++S  ++ G+    L+++  M   G  PN F + +V+K C  +G  +
Sbjct: 119 DGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLK 178

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H   L    + N  +  ++++ + +   +  A ++F  +   D  CW ++I    
Sbjct: 179 LGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALT 238

Query: 223 HCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              +  EAL    SM  + G+  D +TF   L  C  +     G+++H  +I +    ++
Sbjct: 239 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV 298

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + ++L+DMY K   +  + ++F+RM  K+ +SW+ L GG+ +N +      +F K    
Sbjct: 299 VVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM--- 355

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             + +   F  +LR C  L  +  G ++ C  +  G   +  V S+L+ ++ +CG +E A
Sbjct: 356 -EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYA 414

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            ++FD +  +N+ TWN ++ G+  N    + L+ F  + + G++ +  +F  ++  C
Sbjct: 415 QTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 471



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 158/325 (48%), Gaps = 13/325 (4%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           ++  C D F           L+   NL     G +VH  ++  GF  ++ ++++L+ MY 
Sbjct: 256 DHGMCPDGFT------FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYG 309

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG  G   R+FD M  +N VSW+ ++    QNG+F   ++++  M+      + +  G+
Sbjct: 310 KCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEK----VDLYCFGT 365

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C  + A   G  +HC  ++    ++  V  ++++ YAK G +  A+ +F  +   +
Sbjct: 366 ILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRN 425

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           +  WN+MIGG+A  G G EAL + + M+ EGI  D  +FI  L  CS     D GR+   
Sbjct: 426 LITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFI 485

Query: 271 LIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNP 328
            + +   ++  I   + ++D+  ++  ++ A  + E    +D  S W  L G  +   N 
Sbjct: 486 SMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 545

Query: 329 GQTASLFHKFILSGSRPNHVTFSIL 353
            + A    K ++      H+++ +L
Sbjct: 546 -EIAERIAKRVMELEPDYHLSYVLL 569


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 266/518 (51%), Gaps = 5/518 (0%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           M   T  + L  CS       G  +H  ++++  +  + + N +++MY K     +A +V
Sbjct: 1   MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M +K+++SW+ +  G+ +   P     L+ +  L    PN   F+ ++  C  L  +
Sbjct: 61  FDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAV 117

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG ++   +L  G+     V++SLI M+ +C     A SVF N    N  ++N L++G+
Sbjct: 118 TLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      L+ F  + + G+  +   F  V+  C  +EN +   ++H   +K    S  
Sbjct: 178 VENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTP 237

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF-HSLVE 542
           +I + +I  Y     +  + +     E  D+ SW  +++A  H   + + + +F H   E
Sbjct: 238 FIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEE 297

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              +PD++   + L +CA + +    K IH  +++     ++ V +A+++ YAKCG I  
Sbjct: 298 TNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGY 357

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F +  + N ++ +NT+I  + +HGL   A+E+F++M  + ++P   TF+ +++AC+
Sbjct: 358 AYDIFSKMVHHN-LVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLVDKG L F SM+  YG+ P  + + CL+DML R G L +A+  +   PF   P V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            SLLS  R+HG+  +GE  ++ LL L P   + +VLLS
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLS 514



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 198/397 (49%), Gaps = 4/397 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  ++K G  +D+F+ N+++ MY+KCG+  +  +VFDEM E+NLVSW+ ++S   Q
Sbjct: 22  GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE  M + +Y  M     +PNE+   SV+  C S+ A   G  IH  +LK   E   FV
Sbjct: 82  AGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ Y K    + A  VF +    +   +NA+I G+         L     M  +G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D++ F+  L  C+   +   G ++H   ++  ++ +  I N +I MY + + +  A K
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKLL 361
            F  + +KDVISWNTL    S   +  +   +F H    +  RP+  TF+  L  C  L 
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  G Q+    +      +  V ++L+ M+ +CG +  A+ +F  + + N+ +WN +++
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           G+  +      ++ F  +  SG+  +  TF  ++  C
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC 415



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S  FL  +    A  +S   +L +  LG ++H   +K G+ +  F+ N+LI+MY KC   
Sbjct: 93  SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQC 152

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
              L VF    E N VS+  +++  ++N + + GL+ +  M+  G +P+ FA   V+ +C
Sbjct: 153 SDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            +    + G  +HC  +K+ ++  PF+G  ++  Y++L  +  AE+ F  I   DV  WN
Sbjct: 213 TTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWN 272

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            +I   +HC    + L V   M  E  +  D +TF +AL  C+ +A    G+QIH  ++R
Sbjct: 273 TLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           + +   + + NAL++MY K   + YA+ +F +M   +++SWNT+  GF  +    +   L
Sbjct: 333 TRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFC 393
           F +   SG RP+ VTF  LL  C     +D G L    +    G   +    S LI M  
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452

Query: 394 RCGAVEMAHSVFDNVSYKN 412
           R G +  A        + N
Sbjct: 453 RAGRLNEAEEYMRKFPFWN 471



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 213/489 (43%), Gaps = 7/489 (1%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            + S++  C    A   G S+H   LK   + + F+   VLN YAK G    A +VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              ++  W+AMI GY   G    A+++ S M    +  ++Y F + +  C+ ++   +G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           +IH   ++   E    + N+LI MY+K +    A  VF    + + +S+N L  GF EN+
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +    F      G  P+   F  +L  C    +L  G +L C  +         + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIW-ESGV 444
            +I M+     ++ A   F  +  K++ +WN L++  C +C D A  L+ F ++  E+ V
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA-CSHCDDHAKGLRVFKHMTEETNV 300

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  TF   +  C    +     QIH  +++T       + ++L+  Y   G +  +++
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +     ++ SW  +++   + G    AV +F  +  +G +PD      +L +C   G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 565 YQRTK-SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             + +   +      G   ++   S +ID   + G +  A     +    ND +V  +L+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 624 MAYAHHGLV 632
            A   HG V
Sbjct: 481 SASRLHGDV 489


>gi|242082546|ref|XP_002441698.1| hypothetical protein SORBIDRAFT_08g000890 [Sorghum bicolor]
 gi|241942391|gb|EES15536.1| hypothetical protein SORBIDRAFT_08g000890 [Sorghum bicolor]
          Length = 402

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/397 (35%), Positives = 226/397 (56%), Gaps = 6/397 (1%)

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA-----DFDIGRQIHGL 271
           M+   A  G     L + SSM+  G   +++   +AL  CS+ A     D + GRQ+HGL
Sbjct: 1   MVSAAARGGAPDLGLALFSSMVRTGFCPNEFALASALGACSVKASSITCDLNFGRQVHGL 60

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           +I SE E + S++N L+DMY K+   + A  +F ++  KD +SWNT+  G + +++    
Sbjct: 61  VIHSEFESNTSVMNTLMDMYFKAGQKEAAVGIFGKIQWKDTVSWNTMISGLAHDEDERAA 120

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
           A  F      G +PN VTFS++LR  G      LGLQ+  LA   G+ D   V +++I M
Sbjct: 121 ADCFFDMSRFGCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINM 180

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF 451
             +CG +  A+  F N+S +N+ TWNE+++GY  + C  D ++ F ++   G   +  T+
Sbjct: 181 LSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTY 240

Query: 452 FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
             V+    +  + +   QIH  ++K GF+SC ++ +SLIK+ V  G + +  +    A +
Sbjct: 241 PAVLSAFQQDHDARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPLKIIEEAGK 300

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKS 570
           +D+ SWG  +SA V    + EA+ +F+   V+  EKPDE+ILGTILN+CA     ++ + 
Sbjct: 301 MDLVSWGVTISAFVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANAALIRQCRC 360

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           IH  V++ G +    V+SA++DAYAKCGDI  A+ AF
Sbjct: 361 IHALVVRTGHSKHFCVSSALVDAYAKCGDITAAKSAF 397



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 168/391 (42%), Gaps = 8/391 (2%)

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS-----EFGYSIHCF 170
           +VSAA + G  D+GL ++  M   GF PNEFA+ S +  C    +S      FG  +H  
Sbjct: 1   MVSAAARGGAPDLGLALFSSMVRTGFCPNEFALASALGACSVKASSITCDLNFGRQVHGL 60

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +    E N  V  ++++ Y K G   AA  +F  I   D   WN MI G AH      A
Sbjct: 61  VIHSEFESNTSVMNTLMDMYFKAGQKEAAVGIFGKIQWKDTVSWNTMISGLAHDEDERAA 120

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
            +    M   G   ++ TF   L+         +G QI GL  R     ++ + NA+I+M
Sbjct: 121 ADCFFDMSRFGCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINM 180

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
             +   +  A+  F  ++ ++V++WN +  G+  +        LF   +  G+RP+  T+
Sbjct: 181 LSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTY 240

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             +L    +  D     Q+    L  GF   + V++SLI      G+V     + +    
Sbjct: 241 PAVLSAFQQDHDARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPLKIIEEAGK 300

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY--VVETCCRSENQQMVG 468
            ++ +W   +S +  +  D + L  F N++          F    ++  C  +   +   
Sbjct: 301 MDLVSWGVTISAFVKHDLDKEALFLF-NLFRVDCPEKPDEFILGTILNACANAALIRQCR 359

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            IH  +++TG S    + S+L+ +Y   G +
Sbjct: 360 CIHALVVRTGHSKHFCVSSALVDAYAKCGDI 390



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/386 (22%), Positives = 174/386 (45%), Gaps = 8/386 (2%)

Query: 328 PGQTASLFHKFILSGSRPNHVTFSILLRQCGK-----LLDLDLGLQLQCLALHCGFLDEE 382
           P    +LF   + +G  PN    +  L  C         DL+ G Q+  L +H  F    
Sbjct: 11  PDLGLALFSSMVRTGFCPNEFALASALGACSVKASSITCDLNFGRQVHGLVIHSEFESNT 70

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           +V ++L+ M+ + G  E A  +F  + +K+  +WN ++SG   +  +      F ++   
Sbjct: 71  SVMNTLMDMYFKAGQKEAAVGIFGKIQWKDTVSWNTMISGLAHDEDERAAADCFFDMSRF 130

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G + N  TF  ++      E+  +  QI G   + G+S    + +++I      G L  +
Sbjct: 131 GCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCA 190

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
           + F       ++ +W  M++     G + +A+ +F SLV  G +PDE+    +L++    
Sbjct: 191 YGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQD 250

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
              +  + IH  V+K GF +  +V++++I A    G +       +++    D++ +   
Sbjct: 251 HDARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPLKIIEEA-GKMDLVSWGVT 309

Query: 623 IMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           I A+  H L  EA+ +F+  ++    +P +    ++++AC++  L+ + C    ++  + 
Sbjct: 310 ISAFVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANAALI-RQCRCIHALVVRT 368

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAK 707
           G          LVD  ++ G +  AK
Sbjct: 369 GHSKHFCVSSALVDAYAKCGDITAAK 394



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/345 (21%), Positives = 144/345 (41%), Gaps = 1/345 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVHG ++   F ++  + N L+ MY K G     + +F ++  ++ VSW  ++S   
Sbjct: 53  FGRQVHGLVIHSEFESNTSVMNTLMDMYFKAGQKEAAVGIFGKIQWKDTVSWNTMISGLA 112

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            + +       + DM   G  PN+     ++++  +  ++  G  I   A +     N  
Sbjct: 113 HDEDERAAADCFFDMSRFGCKPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVL 172

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  +V+N  ++ G +  A   F ++S  +V  WN MI GY   G   +A+ +  S++  G
Sbjct: 173 VANAVINMLSQCGLLGCAYGFFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFG 232

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D++T+   L       D     QIH  +++        +  +LI   +    +    
Sbjct: 233 ARPDEFTYPAVLSAFQQDHDARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPL 292

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKL 360
           K+ E     D++SW      F ++    +   LF+ F +    +P+      +L  C   
Sbjct: 293 KIIEEAGKMDLVSWGVTISAFVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANA 352

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
             +     +  L +  G      V+S+L+  + +CG +  A S F
Sbjct: 353 ALIRQCRCIHALVVRTGHSKHFCVSSALVDAYAKCGDITAAKSAF 397



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 1/265 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + + +  +  L LS   +S  LG Q+ G   + G+++++ + N +I M S+CG  G    
Sbjct: 133 KPNQVTFSVMLRLSGAKESASLGLQILGLAYRHGYSDNVLVANAVINMLSQCGLLGCAYG 192

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
            F  ++ RN+V+W  +++    +G  +  ++++  +   G  P+EF   +V+        
Sbjct: 193 FFCNLSVRNVVTWNEMIAGYGLHGCSEDAMRLFRSLVCFGARPDEFTYPAVLSAFQQDHD 252

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           +     IH   LK       FV  S++     LG V    ++       D+  W   I  
Sbjct: 253 ARNHEQIHACVLKQGFASCQFVSTSLIKAKVALGSVLDPLKIIEEAGKMDLVSWGVTISA 312

Query: 221 YAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           +       EAL + +    +     D++     L  C+  A     R IH L++R+    
Sbjct: 313 FVKHDLDKEALFLFNLFRVDCPEKPDEFILGTILNACANAALIRQCRCIHALVVRTGHSK 372

Query: 280 SISIVNALIDMYIKSSGMDYAFKVF 304
              + +AL+D Y K   +  A   F
Sbjct: 373 HFCVSSALVDAYAKCGDITAAKSAF 397


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 266/518 (51%), Gaps = 5/518 (0%)

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
           M   T  + L  CS       G  +H  ++++  +  + + N +++MY K     +A +V
Sbjct: 1   MITETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQV 60

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+ M +K+++SW+ +  G+ +   P     L+ +  L    PN   F+ ++  C  L  +
Sbjct: 61  FDEMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAV 117

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
            LG ++   +L  G+     V++SLI M+ +C     A SVF N    N  ++N L++G+
Sbjct: 118 TLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGF 177

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N      L+ F  + + G+  +   F  V+  C  +EN +   ++H   +K    S  
Sbjct: 178 VENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTP 237

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF-HSLVE 542
           +I + +I  Y     +  + +     E  D+ SW  +++A  H   + + + +F H   E
Sbjct: 238 FIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEE 297

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              +PD++   + L +CA + +    K IH  +++     ++ V +A+++ YAKCG I  
Sbjct: 298 TNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGY 357

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F +  + N ++ +NT+I  + +HGL   A+E+F++M  + ++P   TF+ +++AC+
Sbjct: 358 AYDIFSKMVHHN-LVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLVDKG L F SM+  YG+ P  + + CL+DML R G L +A+  +   PF   P V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            SLLS  R+HG+  +GE  ++ LL L P   + +VLLS
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLS 514



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 198/397 (49%), Gaps = 4/397 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  ++K G  +D+F+ N+++ MY+KCG+  +  +VFDEM E+NLVSW+ ++S   Q
Sbjct: 22  GLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQ 81

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            GE  M + +Y  M     +PNE+   SV+  C S+ A   G  IH  +LK   E   FV
Sbjct: 82  AGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFV 138

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ Y K    + A  VF +    +   +NA+I G+         L     M  +G+
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             D++ F+  L  C+   +   G ++H   ++  ++ +  I N +I MY + + +  A K
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKLL 361
            F  + +KDVISWNTL    S   +  +   +F H    +  RP+  TF+  L  C  L 
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            +  G Q+    +      +  V ++L+ M+ +CG +  A+ +F  + + N+ +WN +++
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           G+  +      ++ F  +  SG+  +  TF  ++  C
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTAC 415



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 187/379 (49%), Gaps = 2/379 (0%)

Query: 36  SDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           S  FL  +    A  +S   +L +  LG ++H   +K G+ +  F+ N+LI+MY KC   
Sbjct: 93  SQMFLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQC 152

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
              L VF    E N VS+  +++  ++N + + GL+ +  M+  G +P+ FA   V+ +C
Sbjct: 153 SDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGIC 212

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
            +    + G  +HC  +K+ ++  PF+G  ++  Y++L  +  AE+ F  I   DV  WN
Sbjct: 213 TTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWN 272

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            +I   +HC    + L V   M  E  +  D +TF +AL  C+ +A    G+QIH  ++R
Sbjct: 273 TLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMR 332

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           + +   + + NAL++MY K   + YA+ +F +M   +++SWNT+  GF  +    +   L
Sbjct: 333 TRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVEL 392

Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFC 393
           F +   SG RP+ VTF  LL  C     +D G L    +    G   +    S LI M  
Sbjct: 393 FEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLG 452

Query: 394 RCGAVEMAHSVFDNVSYKN 412
           R G +  A        + N
Sbjct: 453 RAGRLNEAEEYMRKFPFWN 471



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/489 (23%), Positives = 213/489 (43%), Gaps = 7/489 (1%)

Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
            + S++  C    A   G S+H   LK   + + F+   VLN YAK G    A +VF  +
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              ++  W+AMI GY   G    A+++ S M    +  ++Y F + +  C+ ++   +G+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQ 121

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           +IH   ++   E    + N+LI MY+K +    A  VF    + + +S+N L  GF EN+
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
              +    F      G  P+   F  +L  C    +L  G +L C  +         + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD-ADVLKTFCNIW-ESGV 444
            +I M+     ++ A   F  +  K++ +WN L++  C +C D A  L+ F ++  E+ V
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA-CSHCDDHAKGLRVFKHMTEETNV 300

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
             +  TF   +  C    +     QIH  +++T       + ++L+  Y   G +  +++
Sbjct: 301 RPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYD 360

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
             +     ++ SW  +++   + G    AV +F  +  +G +PD      +L +C   G 
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420

Query: 565 YQRTK-SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
             + +   +      G   ++   S +ID   + G +  A     +    ND +V  +L+
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480

Query: 624 MAYAHHGLV 632
            A   HG V
Sbjct: 481 SASRLHGDV 489


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 151/575 (26%), Positives = 280/575 (48%), Gaps = 72/575 (12%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++FYA  GD+    RVF ++   +V  WN M+  YA  G                    
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG-------------------- 41

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
                          DF               + SI +   +++  I+    + A ++F+
Sbjct: 42  ---------------DF---------------KESICLFKIMVEKGIEGKRSESASELFD 71

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++ D+DVISWN++  G+  N    +   ++ + +  G   +  T   +L  C K   L L
Sbjct: 72  KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +  LA+   F    N +++L+ M+ +CG ++ A  VF+ +  +N+ +W  +++GY  
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
           +      +     + + GV+++      ++  C RS +      +H  I     +S  ++
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251

Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
           C++L+  Y   G ++ +    +     D+ SW  M+  L                     
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL--------------------- 290

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
           KPD   +  IL +CA++ A +R K IH ++++ G++++ +VA+A++D Y KCG +  AR+
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD    S D++ +  +I  Y  HG  +EA+  F++M+ A ++P + +F+S++ ACSH G
Sbjct: 351 LFDM-IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSL 725
           L+++G   F  M + + ++P  + Y C+VD+LSR G L  A   IE +P  P  T++ +L
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGAL 469

Query: 726 LSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           L GCRI+ + EL E  +E++  L P+N   +VLL+
Sbjct: 470 LCGCRIYHDIELAEKVAERVFELEPENTGYYVLLA 504



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/550 (24%), Positives = 240/550 (43%), Gaps = 76/550 (13%)

Query: 77  NDIFLQNNLIAMYSKCGYFGWGL--------------------RVFDEMAERNLVSWTLI 116
            +++L N +++ Y+K G F   +                     +FD++ +R+++SW  +
Sbjct: 25  KNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNSM 84

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +S  + NG  + GL +Y  M   G   +   + SV+  C   G    G ++H  A+K   
Sbjct: 85  ISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSF 144

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E+      ++L+ Y+K GD+  A RVF  +   +V  W +MI GY   G+   A+ ++  
Sbjct: 145 ERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQ 204

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG+ +D     + L  C+     D G+ +H  I  + +  ++ + NAL+DMY K   
Sbjct: 205 MEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGS 264

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M+ A  VF  M  KD+ISWNT+ G                       +P+  T + +L  
Sbjct: 265 MEGANSVFSTMVVKDIISWNTMVGEL---------------------KPDSRTMACILPA 303

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  L  L+ G ++    L  G+  + +V ++L+ ++ +CG + +A  +FD +  K++ +W
Sbjct: 304 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 363

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++GY  +    + + TF  + ++G+E +  +F  ++  C            H  +++
Sbjct: 364 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS-----------HSGLLE 412

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G+                F  + N F      E      +  M+  L   G+  +A   
Sbjct: 413 QGWRF--------------FYIMKNDFNIEPKLEH-----YACMVDLLSRTGNLSKAYKF 453

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYA 595
             +L  A   PD  I G +L  C      +  + +   V +L   NT  YV  A I A A
Sbjct: 454 IETLPIA---PDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEA 510

Query: 596 -KCGDIKGAR 604
            K  ++K  R
Sbjct: 511 EKWEEVKRMR 520



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 175/378 (46%), Gaps = 32/378 (8%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           AKS +LS       LG  VH   +K  F   I   N L+ MYSKCG     LRVF++M E
Sbjct: 124 AKSGTLS-------LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGE 176

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
           RN+VSWT +++   ++G  D  + +   M+  G   +  A+ S++  C   G+ + G  +
Sbjct: 177 RNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDV 236

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H +     +  N FV  ++++ YAK G +  A  VF ++   D+  WN M+G        
Sbjct: 237 HDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG-------- 288

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
                         +  D  T    L  C+ ++  + G++IHG I+R+       + NAL
Sbjct: 289 -------------ELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANAL 335

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +D+Y+K   +  A  +F+ +  KD++SW  +  G+  +    +  + F++   +G  P+ 
Sbjct: 336 VDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDE 395

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVF 405
           V+F  +L  C     L+ G +   + +   F  E  +   + ++ +  R G +  A+   
Sbjct: 396 VSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFI 454

Query: 406 DNVSY-KNITTWNELLSG 422
           + +    + T W  LL G
Sbjct: 455 ETLPIAPDATIWGALLCG 472



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 14/189 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   +A  L    +L +   G ++HG+I++ G+++D  + N L+ +Y KCG  G   
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLAR 349

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  ++LVSWT++++    +G  +  +  + +M+  G  P+E +  S++  C   G
Sbjct: 350 LLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA-------KLGDVAAAERVFYSIS-SDDV 211
             E G+          I KN F     L  YA       + G+++ A +   ++  + D 
Sbjct: 410 LLEQGWRF------FYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463

Query: 212 GCWNAMIGG 220
             W A++ G
Sbjct: 464 TIWGALLCG 472


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 162/578 (28%), Positives = 288/578 (49%), Gaps = 1/578 (0%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           KN     +++  Y K G+++ A  +F S+    V  W  +IGGYA      EA N+ + M
Sbjct: 71  KNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              G+  D  T    L G +     +   Q+HG +++   + ++ + N+L+D Y K+  +
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL 190

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             A  +F+ MA+KD +++N L  G+S+        +LF K    G RP+  TF+ +L   
Sbjct: 191 GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAG 250

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            ++ D++ G Q+    + C F+    V ++L+  + +   +  A  +F  +   +  ++N
Sbjct: 251 IQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYN 310

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            L++   +N    + L+ F  +  +  +     F  ++     S N +M  QIH   I T
Sbjct: 311 VLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVT 370

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
              S   + +SL+  Y    +   +              W A++S  V +G + + + +F
Sbjct: 371 DAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLF 430

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +  A    D     +IL +CA + +    K +H  +I+ G  + V+  SA++D YAKC
Sbjct: 431 VEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKC 490

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G IK A   F Q     + + +N LI AYA +G    A+  F++M  + LQP+  +F+S+
Sbjct: 491 GSIKEALQMF-QEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSI 549

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + ACSH GLV++G   F SM   Y ++P  + Y  +VDML R+G  ++A+ ++  MPF+P
Sbjct: 550 LCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEP 609

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
              ++ S+L+ CRIH N+EL   A+++L  +    DAA
Sbjct: 610 DEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAA 647



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 232/517 (44%), Gaps = 33/517 (6%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I LA  LS     +S     QVHGH+VK+G+ + + + N+L+  Y K    G    +F
Sbjct: 138 DHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLF 197

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             MAE++ V++  +++   + G     + ++  M+  GF P+EF   +V+   + M   E
Sbjct: 198 KHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIE 257

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           FG  +H F +K     N FV  ++L+FY+K   +  A ++FY +   D   +N +I   A
Sbjct: 258 FGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCA 317

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G   E+L +   + F      ++ F   L   +   + ++GRQIH   I ++    + 
Sbjct: 318 WNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVL 377

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+L+DMY K      A ++F  +A +  + W  L  G+ +         LF +   + 
Sbjct: 378 VGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAK 437

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              +  T++ +LR C  L  L LG QL    +  G L      S+L+ M+ +CG+++ A 
Sbjct: 438 IGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEAL 497

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            +F  +  +N  +WN L+S Y  N      L++F  +  SG++ N  +F  ++  C    
Sbjct: 498 QMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCAC---- 553

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
                            S CG +   L   Y  F  +   ++     E      + +M+ 
Sbjct: 554 -----------------SHCGLVEEGL--QY--FNSMTQVYKLEPRREH-----YASMVD 587

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            L   G   EA  +   +     +PDE +  +ILNSC
Sbjct: 588 MLCRSGRFDEAEKL---MARMPFEPDEIMWSSILNSC 621



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 225/486 (46%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           ++   N +I  Y K G       +FD M +R++V+WT+++    Q+  F     ++ DM 
Sbjct: 72  NVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMC 131

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
            +G +P+   + +++       +      +H   +K+  +    V  S+L+ Y K   + 
Sbjct: 132 RHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLG 191

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A  +F  ++  D   +NA++ GY+  G+  +A+N+   M   G    ++TF   L    
Sbjct: 192 LACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGI 251

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            + D + G+Q+H  +++     ++ + NAL+D Y K   +  A K+F  M + D IS+N 
Sbjct: 252 QMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNV 311

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           L    + N    ++  LF +   +        F+ LL      L+L++G Q+   A+   
Sbjct: 312 LITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTD 371

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
            + E  V +SL+ M+ +C     A+ +F ++++++   W  L+SGY       D LK F 
Sbjct: 372 AISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFV 431

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +  + +  +  T+  ++  C    +  +  Q+H  II++G  S  +  S+L+  Y   G
Sbjct: 432 EMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCG 491

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            +  + +        +  SW A++SA    G    A+  F  ++ +G +P+     +IL 
Sbjct: 492 SIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILC 551

Query: 558 SCAAIG 563
           +C+  G
Sbjct: 552 ACSHCG 557



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/514 (20%), Positives = 219/514 (42%), Gaps = 62/514 (12%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS----------- 314
           + +   +I++  + +    N  +  +++   +  A K+F+ M  K+VIS           
Sbjct: 27  QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86

Query: 315 --------------------WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
                               W  L GG++++    +  +LF      G  P+H+T + LL
Sbjct: 87  GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
               +   ++   Q+    +  G+     V +SL+  +C+  ++ +A  +F +++ K+  
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
           T+N LL+GY     + D +  F  + + G   +  TF  V+    + ++ +   Q+H  +
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K  F    ++ ++L+  Y    ++  + +       +D  S+  +++     G   E++
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESL 326

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F  L        ++   T+L+  A     +  + IH   I     +EV V ++++D Y
Sbjct: 327 ELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMY 386

Query: 595 AKCGDIKGARMAF-DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           AKC     A   F D +  S+  + +  LI  Y   GL  + +++F +M  A +    AT
Sbjct: 387 AKCDKFGEANRIFADLAHQSS--VPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSAT 444

Query: 654 FVSVMSACS-----------HKGLVDKGCL--LFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
           + S++ AC+           H  ++  GCL  +F                  LVDM ++ 
Sbjct: 445 YASILRACANLASLTLGKQLHSRIIRSGCLSNVFSG--------------SALVDMYAKC 490

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           G +++A  + + MP + S + + +L+S    +G+
Sbjct: 491 GSIKEALQMFQEMPVRNSVS-WNALISAYAQNGD 523


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 169/651 (25%), Positives = 298/651 (45%), Gaps = 69/651 (10%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +N F   +++        ++ AE++F    +   D   W  MI GY+  G+   +    S
Sbjct: 72  RNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFS 131

Query: 236 SMLFE----GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
            M+ +    G   D ++F + ++ C  + D  +  Q+H L+ +        I N+++ MY
Sbjct: 132 LMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMY 191

Query: 292 IKSSGMDYA-------------------------------FKVFERMADKDVISWNTLFG 320
           +K   +D A                                ++F RM ++D +SWNTL  
Sbjct: 192 VKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            FS++    Q  ++F +    G  PN +T+  +L  C    DL  G  L    L      
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL 311

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +    + LI M+ +CG +++A  VF ++   +  +WN L++G        D L  F  + 
Sbjct: 312 DLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMR 371

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            S V ++      ++  C   +       +HG  IK+G  S   + +++I  Y   G  D
Sbjct: 372 RSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTD 431

Query: 501 NS-------------------FEFSNGAE------------RLDMASWGAMMSALVHQGH 529
            +                     FS   +              ++ +W +M+S  V  G 
Sbjct: 432 KADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGF 491

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
           + E + ++ S+   G +PD     T + +CA +   +    +     K G +  V VA++
Sbjct: 492 SEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANS 551

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++  Y++CG IK A+  FD S +  D+I +N ++ A+A +GL  + ++ F+ M     +P
Sbjct: 552 IVTMYSRCGLIKEAKNTFD-SIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKP 610

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
           +  ++VSV+S CSH GLV +G   F SM   +G+ P+ + + C+VD+L R G LE AK +
Sbjct: 611 NHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDL 670

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           IE MPF+P+ TV+ +LL  CR+H +  L E A++KL+ L  +    +VLLS
Sbjct: 671 IEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLS 721



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 214/478 (44%), Gaps = 62/478 (12%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG--------- 93
           DP      +    +L    L  Q+H  + KLGF  +  +QN+++ MY KCG         
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204

Query: 94  -------YFGW---------------GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLK 131
                   F W                L++F+ M ER+ VSW  ++S   Q+G     L 
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
           M+V+M   GF PN    GSV+  C S    ++G  +H   L++    +   G  +++ YA
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYA 324

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G +  A+RVF S+   D   WN++I G  H G G +AL + + M    + +D++    
Sbjct: 325 KCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPT 384

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L  CS       G  +HG  I+S +  S  + NA+I MY K    D A  VF  M  ++
Sbjct: 385 ILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN 444

Query: 312 VISWNTLFGGFSENKNPGQTASLFH---------------------------KFILS--- 341
            ISW  +   FS + + G+    F                            K  +S   
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS 504

Query: 342 -GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+ +TF+  +R C  L  + LG+Q+   A   G     +V +S++ M+ RCG ++ 
Sbjct: 505 NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKE 564

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           A + FD++  K++ +WN +L+ +  N     V+ TF ++ ++  + N  ++  V+  C
Sbjct: 565 AKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGC 622



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 163/678 (24%), Positives = 277/678 (40%), Gaps = 107/678 (15%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY----------------FGWGL-- 99
           KS  +  ++H  ++  G  + +FL NNL+ MYS CG                 F W    
Sbjct: 22  KSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMI 81

Query: 100 -------------RVFDEMAER--NLVSWTLIVSAAIQNG----EFDMGLKMYVDMKTNG 140
                        ++FDEM  R  + VSWT ++S   QNG     F+    M  D    G
Sbjct: 82  RALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGG 141

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
              + F+  SVMK C S+G S     +H    K+       +  SV+  Y K GDV  AE
Sbjct: 142 KNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAE 201

Query: 201 RVFYSISSDDVGCWNAMIGGYAHC-------------------------------GYGFE 229
            VF+ I    + CWN+MI GY+                                 G+G +
Sbjct: 202 TVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQ 261

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
            L +   M  +G + +  T+ + L  C+  +D   G  +H  I+R E    +   N LID
Sbjct: 262 CLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLID 321

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGG-------------FSENKNPGQTASLFH 336
           MY K   +D A +VF+ + + D ISWN+L  G             F++ +   +++ +  
Sbjct: 322 MYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMR---RSSVVLD 378

Query: 337 KFILSG-----SRPNHVTFSILLR----QCGKLLDLDLGLQLQCLALHCGFLDEENVT-- 385
           +FIL       S P++ +   LL     + G      +G  +  +   CG  D+ ++   
Sbjct: 379 EFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR 438

Query: 386 ----------SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
                     +++I  F R G +  A   FD +  +NI TWN +LS Y  N    + LK 
Sbjct: 439 LMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKL 498

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           + ++  +GV+ +  TF   +  C      ++  Q+     K G S    + +S++  Y  
Sbjct: 499 YVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G +  +    +  +  D+ SW AM++A    G   + +  F  +++   KP+     ++
Sbjct: 559 CGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSV 618

Query: 556 LNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFD-QSFNS 613
           L+ C+ +G     K     + ++ G +      S ++D   + G ++ A+   +   F  
Sbjct: 619 LSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKP 678

Query: 614 NDVIVYNTLIMAYAHHGL 631
           N  +    L     HH L
Sbjct: 679 NATVWSALLGSCRVHHDL 696



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 125/562 (22%), Positives = 229/562 (40%), Gaps = 100/562 (17%)

Query: 249 FINALQGCSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           F +A + CS       I R++H  +I S ++ S+ ++N L+ MY        AF+VF+  
Sbjct: 10  FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKF------------ILSGSRPNHV------T 349
             +++ +WNT+      +        LF +             ++SG   N        T
Sbjct: 70  HHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFET 129

Query: 350 FSILLRQ-------------------CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
           FS+++R                    CG L D  L +QL  L    GF  E  + +S++ 
Sbjct: 130 FSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVG 189

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-----------FNCCD---------- 429
           M+ +CG V++A +VF ++   ++  WN ++ GY            FN             
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249

Query: 430 ----------ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
                        L  F  +   G   N  T+  V+  C  + + +    +H  I++   
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           S      + LI  Y   G LD +          D  SW ++++ +VH G   +A+ +F+ 
Sbjct: 310 SLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQ 369

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +  +    DE+IL TIL  C+        + +H + IK G  +   V +A+I  YAKCGD
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429

Query: 600 IKGARM------------------AFDQS------------FNSNDVIVYNTLIMAYAHH 629
              A +                  AF +S                +++ +N+++  Y  +
Sbjct: 430 TDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQN 489

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G   E ++++  M+   +QP   TF + + AC+   +V  G +   +  +++G+  +   
Sbjct: 490 GFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG-MQVVTHATKFGLSLNVSV 548

Query: 690 YGCLVDMLSRNGYLEDAKHVIE 711
              +V M SR G +++AK+  +
Sbjct: 549 ANSIVTMYSRCGLIKEAKNTFD 570



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 14/188 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I    S+    +L    LG QV  H  K G + ++ + N+++ MYS+CG      
Sbjct: 507 VQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAK 566

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM---YVDMKTNGFMPNEFAVGSVMKVCV 156
             FD + +++L+SW  +++A  QNG   +G+K+   + DM      PN  +  SV+  C 
Sbjct: 567 NTFDSIDDKDLISWNAMLAAFAQNG---LGIKVIDTFEDMLKTECKPNHISYVSVLSGCS 623

Query: 157 SMGASEFGYSIHCFALKIRI----EKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDV 211
            MG    G   H F    R+      N    C V +   + G +  A+ +   +    + 
Sbjct: 624 HMGLVAEGK--HYFDSMTRVFGISPTNEHFSCMV-DLLGRAGLLEQAKDLIEGMPFKPNA 680

Query: 212 GCWNAMIG 219
             W+A++G
Sbjct: 681 TVWSALLG 688


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 299/605 (49%), Gaps = 12/605 (1%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA--AERVFYSISSDDVGCWNAMIGGYAH 223
           ++H    +     + F+  S+L  Y +LG  A   A R+   +   +   +N +I  Y+ 
Sbjct: 20  AVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSR 79

Query: 224 CGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
            G    AL     +    G+ +D++T+  AL  CS   D   G+ +H + +   +   + 
Sbjct: 80  AGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVF 139

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + N+L  MY     M  A +VF+   + D +SWN+L  G+       +T  +F      G
Sbjct: 140 LSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHG 199

Query: 343 SRPNHVTFSILLRQCGKLLDL--DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
              N      +++ C    D+   +   +    +  G   +  + S++I M+ + GA+  
Sbjct: 200 LGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTN 259

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCC------DADVLKTFCNIWESGVEVNGCTFFYV 454
           A ++F +V   N+  +N +++G+C +          + L  +  +   G++ +  TF  +
Sbjct: 260 AVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSI 319

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C  +       QIHG ++K  F    YI S+LI  Y + G +++ +       + D+
Sbjct: 320 LRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDI 379

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            +W +M+S  V      +A+ +F   +  G KPD + + +++N+CA++   +  + I   
Sbjct: 380 VTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCL 439

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            IK GFN    + ++ I   A+ GD+      F Q   S DV+ ++ +I ++A HG   +
Sbjct: 440 AIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRF-QEMESRDVVSWSAVISSHAQHGCARD 498

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+ IF++M  A + P++ TF++V++ACSH GLVD G   ++ M ++YG+ P+     C+V
Sbjct: 499 ALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVV 558

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+L R G L DA+  I    F     V+RSLL+ CRIHG+ E G+  +++++ L P + A
Sbjct: 559 DLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSA 618

Query: 755 AHVLL 759
           ++V+L
Sbjct: 619 SYVIL 623



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 215/427 (50%), Gaps = 23/427 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH   V  G  N +FL N+L +MY+ CG  G   RVFD   E + VSW  ++S  ++
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY----SIHCFALKIRIEK 178
            G  +  LK++  M  +G   N FA+GS++K C S   S+ G     ++H   +K  ++ 
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCAS--GSDVGRHIAEAVHGCVVKAGLDA 239

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY----AHCG--YGFEALN 232
           + F+  ++++ YAK G +  A  +F S+   +V  +NAMI G+    A  G     EAL+
Sbjct: 240 DLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALS 299

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           + S M   G+   ++TF + L+ C+L  +F  G+QIHG +++        I +ALID+Y 
Sbjct: 300 LYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYS 359

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
            S  M+  ++ F  +  +D+++W ++  G  +N+   +   LF + I  G +P+  T S 
Sbjct: 360 DSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSS 419

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           ++  C  L     G Q+QCLA+  GF     + +S I+M  R G V+     F  +  ++
Sbjct: 420 VMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRD 479

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W+ ++S +  + C  D L+ F  +  + V  N  TF  V+  C            HG
Sbjct: 480 VVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACS-----------HG 528

Query: 473 AIIKTGF 479
            ++  G 
Sbjct: 529 GLVDDGL 535



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/605 (24%), Positives = 274/605 (45%), Gaps = 19/605 (3%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG--WGLRVFDEMAERNLVSWTLIVSAAIQN 123
           VH HI +   T  +FL+N+L+A Y + G        R+ DEM  RN VS+ L++S+  + 
Sbjct: 21  VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPRRNAVSYNLLISSYSRA 80

Query: 124 GEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           G     L+ +   +   G   + F   + +  C        G ++H   +   +    F+
Sbjct: 81  GLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFL 140

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+ + YA  G++  A RVF +    D   WN+++ GY   G   E L V S M   G+
Sbjct: 141 SNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGL 200

Query: 243 TMDKYTFINALQGCSLVADFDIGRQI----HGLIIRSEVECSISIVNALIDMYIKSSGMD 298
             + +   + ++ C+  +  D+GR I    HG ++++ ++  + + +A+IDMY K   + 
Sbjct: 201 GWNSFALGSIIKCCA--SGSDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALT 258

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNP------GQTASLFHKFILSGSRPNHVTFSI 352
            A  +F+ + D +VI +N +  GF  ++         +  SL+ +    G +P+  TFS 
Sbjct: 259 NAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSS 318

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +LR C    +   G Q+    L   F D++ + S+LI ++   G +E  +  F ++  ++
Sbjct: 319 ILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQD 378

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           I TW  ++SG   N      L+ F      G++ +  T   V+  C      +   QI  
Sbjct: 379 IVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQC 438

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
             IK GF+    + +S I      G +D         E  D+ SW A++S+    G   +
Sbjct: 439 LAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARD 498

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVI 591
           A+ IF+ ++ A   P+E     +L +C+  G        +  +  + G +  +   + V+
Sbjct: 499 ALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVV 558

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP-S 650
           D   + G +  A      S   +D +V+ +L+ +   HG +     + D  ++ +L+P S
Sbjct: 559 DLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVAD--QIMDLEPTS 616

Query: 651 QATFV 655
            A++V
Sbjct: 617 SASYV 621



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 170/370 (45%), Gaps = 8/370 (2%)

Query: 60  RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS- 118
           R +   VHG +VK G   D+FL + +I MY+K G     + +F  + + N++ +  +++ 
Sbjct: 222 RHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAG 281

Query: 119 -----AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK 173
                AA+        L +Y +M++ G  P+EF   S+++ C   G   FG  IH   LK
Sbjct: 282 FCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLK 341

Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV 233
                + ++G ++++ Y+  G +    R F S+   D+  W +MI G        +AL +
Sbjct: 342 HSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRL 401

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
               +  G+  D +T  + +  C+ +A    G QI  L I+       ++ N+ I M  +
Sbjct: 402 FQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCAR 461

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
           S  +D   + F+ M  +DV+SW+ +    +++        +F++ + +   PN VTF  +
Sbjct: 462 SGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNV 521

Query: 354 LRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS-VFDNVSYK 411
           L  C     +D GL+  + +    G        + ++ +  R G +  A + + D+  + 
Sbjct: 522 LTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHD 581

Query: 412 NITTWNELLS 421
           +   W  LL+
Sbjct: 582 DAVVWRSLLA 591



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 114/296 (38%), Gaps = 57/296 (19%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   ++  ++   +L     G Q+    +K GF     + N+ I M ++ G      
Sbjct: 410 LKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVT 469

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           R F EM  R++VSW+ ++S+  Q+G     L+++ +M      PNE    +V+  C   G
Sbjct: 470 RRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGG 529

Query: 160 ASEFGYSIHCFALKIRIEKNPF--------VGCSVLNFYAKLGDVAAAER-VFYSISSDD 210
             + G   +       I KN +        V C V++   + G +A AE  +  S   DD
Sbjct: 530 LVDDGLRYY------EIMKNEYGLSPTIKHVTC-VVDLLGRAGRLADAEAFIRDSAFHDD 582

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
              W ++                                   L  C +  D + G+ +  
Sbjct: 583 AVVWRSL-----------------------------------LASCRIHGDMERGQLVAD 607

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISWNTLFGG 321
            I+  E   S S V  L +MY+ +  +  A K  + M ++ V     +SW  L  G
Sbjct: 608 QIMDLEPTSSASYV-ILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSG 662


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 169/636 (26%), Positives = 310/636 (48%), Gaps = 18/636 (2%)

Query: 138 TNGFMPNEFAVGSVMKVC--VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           + G  P+ F +    + C  + +GA+  G  +H  A K+ +  +PFVG S+++ Y + G 
Sbjct: 59  SEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGR 118

Query: 196 VAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKYTFINA 252
           V  AE+VF  I  ++ ++  WNA++   +  G     L +    L   G  +D+ T +  
Sbjct: 119 VEDAEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDCLVAVGGMVDEATLVTV 176

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L  C+ +   + GR +HGL  +S  +    + NAL+DMY K   +  A + F       V
Sbjct: 177 LPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEA--PSV 234

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILS--GSRP-NHVTFSILLRQCGKLLDLDLGLQL 369
           +SWN + G ++ N+  G    L     +   GS P + +T   +L  C    +L    +L
Sbjct: 235 VSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLREL 294

Query: 370 QCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
               +  G     + V ++L+  + RCG +  A  VF ++  K +++WN L+S +     
Sbjct: 295 HAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNT 354

Query: 429 DADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
            A  ++ F  +  + G++ +G +   ++  C   ++   V   HG I++ G      I +
Sbjct: 355 AA-AIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRA 413

Query: 488 SLIKSYVNFGQLDN-SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           SL+ +Y+   + +  +    +  E      W AM+S     G   E++ +F  +      
Sbjct: 414 SLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGH 473

Query: 547 PDEYILGT-ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
               I  T  L +C+ + + +  K +H F +K     + +++S++ID Y+KCG ++ AR 
Sbjct: 474 CSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDART 533

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            FD+    +  + +  +I  YA +GL  EA+E++ KM+   ++P + T++ ++ AC H G
Sbjct: 534 FFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAG 593

Query: 666 LVDKGCLLFKSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
           ++++G   F  M +  + ++   + Y C++ MLSR G   DA  ++  MP +P   +  S
Sbjct: 594 MLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSS 653

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +LS C IHG  ELG   +E+LL L P     +VL S
Sbjct: 654 VLSACHIHGEAELGSDVAERLLELEPDKAEHYVLAS 689



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 270/605 (44%), Gaps = 24/605 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAA 120
           G QVH    KLG   D F+ N+L++MY +CG      +VF  +  A RN+VSW  +++A 
Sbjct: 87  GRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL 146

Query: 121 IQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             +G+   GL+++ D +   G M +E  + +V+ +C ++G SE G ++H  A K   +  
Sbjct: 147 --SGDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAP 204

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
             VG ++++ YAK G++A AER F    S  V  WN M+G Y        A  ++  M  
Sbjct: 205 ARVGNALVDMYAKCGELADAERAFPEAPS--VVSWNVMLGAYTRNREAGAAFGLLRDMQI 262

Query: 240 E---GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSS 295
           +    +  D+ T ++ L  CS   +    R++H   +R  ++  S  + NAL+  Y +  
Sbjct: 263 KEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCG 322

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILL 354
            + +A +VF  +  K V SWNTL    ++ +N      LF +   + G +P+  +   LL
Sbjct: 323 RLLHADRVFTDIRRKTVSSWNTLISAHAQ-QNTAAAIELFIQMTNACGLKPDGFSIGSLL 381

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE-MAHSVFDNVSYKNI 413
             C     L          L  G   +  + +SL+  + RC   E +A  +FD +  K  
Sbjct: 382 MACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGE 441

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE---TCCRSENQQMVGQI 470
             W  ++SGY  N    + L+ F  +    VE +  +          C    + ++  ++
Sbjct: 442 VLWIAMISGYSQNGLPGESLQLFREM--QSVEGHCSSVISATSALMACSELSSVRLGKEM 499

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM-ASWGAMMSALVHQGH 529
           H   +K       ++ SSLI  Y   G ++++  F +  +  D   SW AM++     G 
Sbjct: 500 HCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGL 559

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA-- 587
             EAV ++  +   G +PDE+    +L +C   G  +        +       EV +   
Sbjct: 560 GREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHY 619

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           S VI   ++ G    A     +     D  + ++++ A   HG      ++ +  +L  L
Sbjct: 620 SCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAE--RLLEL 677

Query: 648 QPSQA 652
           +P +A
Sbjct: 678 EPDKA 682



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 1/121 (0%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I    +L     L S  LG ++H   +K    +D FL ++LI MYSKCG+       FD 
Sbjct: 478 ISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDR 537

Query: 105 MAERNL-VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           +  R+  VSWT +++    NG     +++Y  M+  G  P+EF    ++  C   G  E 
Sbjct: 538 LKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEE 597

Query: 164 G 164
           G
Sbjct: 598 G 598


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 167/534 (31%), Positives = 276/534 (51%), Gaps = 9/534 (1%)

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL ++ S+    I+     + + LQ C+ V  F+ G QIH  +I+S +E    + N+L+ 
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161

Query: 290 MYIKSSGMDY--AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +Y K  G D+    KVF+ +  KDVISW ++  G+     P  +  LF K +  G  PN 
Sbjct: 162 LYFKL-GTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNA 220

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            T S +++ C +L DL LG     + L  GF     + S+LI M  R  A++ A  +FD 
Sbjct: 221 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 280

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSENQQM 466
           +   +   W  ++S    N    + L+ F ++  + G+  +G TF  V+  C      + 
Sbjct: 281 LLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQ 340

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             ++H  +I TGF     + SSL+  Y   G +  S    +     +  SW A++     
Sbjct: 341 GKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQ 400

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G     + IF  +    EK D Y  GTIL +CA + A ++ K +H   I+ G   +V V
Sbjct: 401 NGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIV 456

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            SA++D YAKCG I+ A+  FDQ     ++I +N++I  +A +G   EA+ IF++M    
Sbjct: 457 ESALVDLYAKCGCIEYAQTIFDQ-MPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEG 515

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           ++P   +F+ ++ ACSH+GLVD+G   F SM   YG++   + Y C+VD+L R G LE+A
Sbjct: 516 IKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEA 575

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           + +IE   F+   +++ +LL  C    N E+ E  +++++ L P    ++VLL+
Sbjct: 576 EILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLA 629



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 228/507 (44%), Gaps = 7/507 (1%)

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++GE    L++   +             S+++ C  + A   G  IH   +K  +E + F
Sbjct: 95  KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154

Query: 182 VGCSVLNFYAKLG-DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           VG S+L  Y KLG D     +VF  +   DV  W +MI GY   G    +L +   ML  
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 214

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  + +T    ++ CS + D  +GR  HG+++    + +  I +ALIDM+ ++  +D A
Sbjct: 215 GVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDA 274

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGK 359
            ++F+ + + D I W ++    + N    +    F+      G  P+  TF  +L  CG 
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGN 334

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L  L  G ++    +  GF     V SSL+ M+ +CG+V  +  +FD +  KN  +W+ L
Sbjct: 335 LGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSAL 394

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           L GYC N       K+   I+    +V+   F  ++ TC      +   ++H   I+ G 
Sbjct: 395 LGGYCQN----GDFKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGG 450

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
                + S+L+  Y   G ++ +    +     ++ +W +M+      G   EA+ IF+ 
Sbjct: 451 WRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQ 510

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCG 598
           +V+ G KPD      IL +C+  G     +     + K  G    +   S ++D   + G
Sbjct: 511 MVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAG 570

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMA 625
            ++ A +  + S   +D  ++  L+ A
Sbjct: 571 LLEEAEILIETSDFRDDSSLWAALLGA 597



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 207/417 (49%), Gaps = 6/417 (1%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY-FGWGLRVF 102
           P+  A  L     + +   G Q+H H++K G   D F+ N+L+ +Y K G  F    +VF
Sbjct: 118 PVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVF 177

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +  ++++SWT ++S  ++ G+    L+++  M   G  PN F + +V+K C  +G  +
Sbjct: 178 DGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLK 237

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H   L    + N  +  ++++ + +   +  A ++F  +   D  CW ++I    
Sbjct: 238 LGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALT 297

Query: 223 HCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
              +  EAL    SM  + G+  D +TF   L  C  +     G+++H  +I +    ++
Sbjct: 298 RNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNV 357

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + ++L+DMY K   +  + ++F+RM  K+ +SW+ L GG+ +N +      +F K    
Sbjct: 358 VVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM--- 414

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             + +   F  +LR C  L  +  G ++ C  +  G   +  V S+L+ ++ +CG +E A
Sbjct: 415 -EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYA 473

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            ++FD +  +N+ TWN ++ G+  N    + L+ F  + + G++ +  +F  ++  C
Sbjct: 474 QTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 530



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 13/325 (4%)

Query: 31  NNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYS 90
           ++  C D F           L+   NL     G +VH  ++  GF  ++ ++++L+ MY 
Sbjct: 315 DHGMCPDGFT------FGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYG 368

Query: 91  KCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
           KCG  G   R+FD M  +N VSW+ ++    QNG+F   ++++  M+        +  G+
Sbjct: 369 KCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGT 424

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           +++ C  + A   G  +HC  ++    ++  V  ++++ YAK G +  A+ +F  +   +
Sbjct: 425 ILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRN 484

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           +  WN+MIGG+A  G G EAL + + M+ EGI  D  +FI  L  CS     D GR+   
Sbjct: 485 LITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFI 544

Query: 271 LIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKNP 328
            + +   ++  I   + ++D+  ++  ++ A  + E    +D  S W  L G  +   N 
Sbjct: 545 SMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 604

Query: 329 GQTASLFHKFILSGSRPNHVTFSIL 353
            + A    K ++      H+++ +L
Sbjct: 605 -EIAERIAKRVMELEPDYHLSYVLL 628


>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Glycine max]
          Length = 563

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 160/561 (28%), Positives = 289/561 (51%), Gaps = 23/561 (4%)

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS--GMDYAFKVFE 305
           T ++ L  C  + +    +++HGLI+ +    SI  ++ LID  + S    ++YA  V  
Sbjct: 6   TILSLLAKCKSMREL---KKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLR 62

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           ++ +  V  WN++  GF  + NP  +  L+ + I +G  P+H TF  +L+ C  + D D 
Sbjct: 63  QIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDC 122

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +    +  GF  +    + L++M+  C  ++    VFDN+   N+  W  L++GY  
Sbjct: 123 GKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVK 182

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF------ 479
           N    + LK F ++    VE N  T    +  C  S +      +H  I K G+      
Sbjct: 183 NNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMST 242

Query: 480 -SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
            +S   + +++++ Y   G+L  + +  N   + ++ SW +M++A      + EA+ +F 
Sbjct: 243 SNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFF 302

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +  +G  PD+    ++L+ CA   A    +++H +++K G  T++ +A+A++D YAK G
Sbjct: 303 DMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTG 362

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSV 657
           ++  A+  F  S    DV+++ ++I   A HG  +EA+ +F  M+  ++L P   T++ V
Sbjct: 363 ELGNAQKIFS-SLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGV 421

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + ACSH GLV++    F+ M   YGM P  + YGC+VD+LSR G+  +A+ ++E M  QP
Sbjct: 422 LFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQP 481

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS----KRKRQREGN---- 769
           +  ++ +LL+GC+IH N  +      +L  L P     H+LLS    K  R  E N    
Sbjct: 482 NIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTRK 541

Query: 770 LLDHEGVCNVNDGIKTVDLKL 790
           ++ H+ +     G  +V++KL
Sbjct: 542 VMKHKRITK-TIGHSSVEMKL 561



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 221/471 (46%), Gaps = 11/471 (2%)

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
           ++ GD+  A+ V   I +  V  WN+MI G+ +      ++ +   M+  G + D +TF 
Sbjct: 49  SEFGDINYADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFP 108

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             L+ C ++AD D G+ IH  I++S  E        L+ MY+  + M    KVF+ +   
Sbjct: 109 FVLKACCVIADQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKW 168

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           +V++W  L  G+ +N  P +   +F         PN +T    L  C    D+D G  + 
Sbjct: 169 NVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVH 228

Query: 371 CLALHCG---FLDEEN----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
                 G   F+   N    + ++++ M+ +CG +++A  +F+ +  +NI +WN +++ Y
Sbjct: 229 QRIRKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAY 288

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
                  + L  F ++W SGV  +  TF  V+  C       +   +H  ++KTG ++  
Sbjct: 289 NQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDI 348

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE- 542
            + ++L+  Y   G+L N+ +  +  ++ D+  W +M++ L   GH +EA+++F ++ E 
Sbjct: 349 SLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQED 408

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIK 601
           +   PD      +L +C+ +G  +  K     + ++ G          ++D  ++ G  +
Sbjct: 409 SSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFR 468

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            A    +      ++ ++  L+     H  V  A ++  K++L  L+P Q+
Sbjct: 469 EAERLMETMTVQPNIAIWGALLNGCQIHENVCVANQV--KVRLKELEPCQS 517



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 180/389 (46%), Gaps = 22/389 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  IVK GF  D +    L+ MY  C     GL+VFD + + N+V+WT +++  ++
Sbjct: 123 GKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVK 182

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK---N 179
           N +    LK++ DM      PNE  + + +  C      + G  +H      RI K   +
Sbjct: 183 NNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQ-----RIRKAGYD 237

Query: 180 PFVGCS---------VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           PF+  S         +L  YAK G +  A  +F  +   ++  WN+MI  Y       EA
Sbjct: 238 PFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEA 297

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L++   M   G+  DK TF++ L  C+      +G+ +H  ++++ +   IS+  AL+DM
Sbjct: 298 LDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDM 357

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVT 349
           Y K+  +  A K+F  +  KDV+ W ++  G + + +  +  S+F       S  P+H+T
Sbjct: 358 YAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHIT 417

Query: 350 FSILLRQCGKL-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +  +L  C  + L  +     + +    G +        ++ +  R G    A  + + +
Sbjct: 418 YIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETM 477

Query: 409 SYK-NITTWNELLSGYCF--NCCDADVLK 434
           + + NI  W  LL+G     N C A+ +K
Sbjct: 478 TVQPNIAIWGALLNGCQIHENVCVANQVK 506



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 216/519 (41%), Gaps = 43/519 (8%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI--AMYSKCGYFGWGLRVFDEMAER 108
           LSL    KS     ++HG IV       I   + LI   + S+ G   +   V  ++   
Sbjct: 8   LSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNP 67

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           ++  W  ++   + +    M + +Y  M  NG+ P+ F    V+K C  +   + G  IH
Sbjct: 68  SVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIH 127

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              +K   E + +    +L+ Y    D+ +  +VF +I   +V  W  +I GY      +
Sbjct: 128 SCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPY 187

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-------SEVECSI 281
           EAL V   M    +  ++ T +NAL  C+   D D GR +H  I +       S    +I
Sbjct: 188 EALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNI 247

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            +  A+++MY K   +  A  +F +M  ++++SWN++   +++ +   +   LF     S
Sbjct: 248 ILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTS 307

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
           G  P+  TF  +L  C     L LG  +    L  G   + ++ ++L+ M+ + G +  A
Sbjct: 308 GVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNA 367

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCR 460
             +F ++  K++  W  +++G   +    + L  F  + E S +  +  T+  V+  C  
Sbjct: 368 QKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSH 427

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
                 VG +  A                     +F  +   +    G E      +G M
Sbjct: 428 ------VGLVEEA-------------------KKHFRLMTEMYGMVPGREH-----YGCM 457

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           +  L   GH  EA  +  ++     +P+  I G +LN C
Sbjct: 458 VDLLSRAGHFREAERLMETMT---VQPNIAIWGALLNGC 493


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 179/653 (27%), Positives = 306/653 (46%), Gaps = 72/653 (11%)

Query: 176 IEKNPFV-----GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           +   PF+     G  V+  Y   G    A  V   ++      WN +I  +   G    A
Sbjct: 87  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 146

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           +NV   ML  G   D +T  + L+ C  +  +  G   HGLI  +  E ++ I NAL+ M
Sbjct: 147 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 206

Query: 291 YIKSSGMDYAFKVFERMADK---DVISWNTLFGGFSENKNPGQTASLFHKFIL------S 341
           Y +   ++ A  +F+ +  +   DVISWN++     ++ N      LF K  L      +
Sbjct: 207 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 266

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             R + ++   +L  CG L  +    ++   A+  G   +  V ++LI  + +CG +E A
Sbjct: 267 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 326

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV----ET 457
             VF+ + +K++ +WN +++GY  +       + F N+ +  + ++  T+  V+    + 
Sbjct: 327 VKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQR 386

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYI------CSSL--------IKSYV--------- 494
            C  E   +  Q+   I      +C  I      C+SL        I +Y          
Sbjct: 387 GCSHEALNLFRQM---IFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 443

Query: 495 -NFGQLDNSFEFSNGA----------------------ERLDMASWGAMMSALVHQGHNH 531
            +FG  D      N                        E  ++ +W  M+      G ++
Sbjct: 444 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 503

Query: 532 EAVTIFHSLVEA--GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVA 587
           +A+ +F  ++    G  P+ Y +  IL +CA + A +  K IH +V++     ++  +VA
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 563

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +ID Y+KCGD+  AR  FD S +    I + +++  Y  HG  SEA++IFDKM+ A  
Sbjct: 564 NCLIDMYSKCGDVDTARHVFD-SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P   TF+ V+ ACSH G+VD+G   F SM + YG+ P  + Y C +D+L+R+G L+ A 
Sbjct: 623 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 682

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ MP +P+  V+ +LLS CR+H N EL E A  KL+ +  +ND ++ L+S
Sbjct: 683 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 735



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 158/677 (23%), Positives = 275/677 (40%), Gaps = 65/677 (9%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F +   L   ++A Y  CG   + L V + +     V W L++   I+ G  D  + +  
Sbjct: 92  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 151

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M   G  P+ F +  V+K C  + +   G + H        E N F+  +++  Y++ G
Sbjct: 152 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 211

Query: 195 DVAAAERVFYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSSM---LFEGITMDK-- 246
            +  A  +F  I+    DDV  WN+++  +      + AL++ S M   + E  T ++  
Sbjct: 212 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 271

Query: 247 -YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             + +N L  C  +      +++HG  IR+     + + NALID Y K   M+ A KVF 
Sbjct: 272 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 331

Query: 306 RMADKDVISWNTLFGGFSENKN-----------------------------------PGQ 330
            M  KDV+SWN +  G+S++ N                                     +
Sbjct: 332 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 391

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN------- 383
             +LF + I SGS PN VT   +L  C  L     G ++   +L    L  +N       
Sbjct: 392 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 451

Query: 384 ---VTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCN 438
              V ++LI M+ +C + + A S+FD++    +N+ TW  ++ G+       D LK F  
Sbjct: 452 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 511

Query: 439 IWES--GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--SSCGYICSSLIKSYV 494
           +     GV  N  T   ++  C      ++  QIH  +++     SS  ++ + LI  Y 
Sbjct: 512 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 571

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G +D +    +   +    SW +MM+     G   EA+ IF  + +AG  PD+     
Sbjct: 572 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 631

Query: 555 ILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +L +C+  G   +  S         G        +  ID  A+ G +  A          
Sbjct: 632 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 691

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCL 672
              +V+  L+ A   H  V  A    +K+   N +   + T +S + A + +    K   
Sbjct: 692 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW---KDVA 748

Query: 673 LFKSMDSQYGMQPSPDC 689
             + +  + G++  P C
Sbjct: 749 RIRHLMKKSGIKKRPGC 765



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 215/479 (44%), Gaps = 62/479 (12%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   L   L     L S   G+  HG I   GF +++F+ N L+AMYS+CG       
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218

Query: 101 VFDEMAER---NLVSWTLIVSAAIQNGEFDMGLKMYVDM------KTNGFMPNEFAVGSV 151
           +FDE+ +R   +++SW  IVSA +++      L ++  M      K      +  ++ ++
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C S+ A      +H  A++     + FVG ++++ YAK G +  A +VF  +   DV
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338

Query: 212 GCWNAMIGGYAHCG----------------------------YGF-------EALNVVSS 236
             WNAM+ GY+  G                             G+       EALN+   
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 398

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-----------EVECSISIVN 285
           M+F G   +  T I+ L  C+ +  F  G +IH   +++           E E  + + N
Sbjct: 399 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE-DLMVYN 457

Query: 286 ALIDMYIKSSGMDYAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-- 341
           ALIDMY K      A  +F+   + +++V++W  + GG ++  +      LF + I    
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN--VTSSLIYMFCRCGAVE 399
           G  PN  T S +L  C  L  + +G Q+    L     +     V + LI M+ +CG V+
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  VFD++S K+  +W  +++GY  +   ++ L  F  + ++G   +  TF  V+  C
Sbjct: 578 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 636



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 32/302 (10%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKL----------GFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           LS   +L +   GT++H + +K           G   D+ + N LI MYSKC  F     
Sbjct: 415 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 474

Query: 101 VFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCV 156
           +FD++   ERN+V+WT+++    Q G+ +  LK++V+M  +  G  PN + +  ++  C 
Sbjct: 475 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 534

Query: 157 SMGASEFGYSIHCFALKI-RIEKNP-FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            + A   G  IH + L+  R E +  FV   +++ Y+K GDV  A  VF S+S      W
Sbjct: 535 HLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISW 594

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-------VADFDIGRQ 267
            +M+ GY   G G EAL++   M   G   D  TF+  L  CS        ++ FD    
Sbjct: 595 TSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSA 654

Query: 268 IHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSEN 325
            +GL  R+E   C+       ID+  +S  +D A++  + M  +   + W  L      +
Sbjct: 655 DYGLTPRAEHYACA-------IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 707

Query: 326 KN 327
            N
Sbjct: 708 SN 709


>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
 gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
          Length = 694

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 178/688 (25%), Positives = 329/688 (47%), Gaps = 48/688 (6%)

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
           + +N+ SWT+I+SA ++       L+++  M   G   +E  + +++  C S+   + G 
Sbjct: 3   SRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGK 62

Query: 166 SIHCFALKIRI------EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
            IH   +++        E++  VG S++N YAK   +A A  +F  + +  V  W  M+ 
Sbjct: 63  MIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVT 122

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
            +A  G    A+     M  +G+  +  TF+  L  CS   +   GR+I   +  S ++ 
Sbjct: 123 AFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDS 182

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + + +A+++ Y K   +D A + F+RM  K+ ++WN +   + ++    Q   LF    
Sbjct: 183 DLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATME 242

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-------VTSSLIYMF 392
             G  P+ +  S +L  C  L   + G ++     H   +D          V ++L++M+
Sbjct: 243 DEGVVPDAMAVSSILGACSGL---ESGKRI-----HSAVIDRRQELQSDRAVCNALVHMY 294

Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE---SGVEVNGC 449
            RCG+++ A  VF  +  KN  +W  +++ +       D+   F    E    GV  +  
Sbjct: 295 ARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGVAPSEV 354

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI--------CSSLIKSYVNFGQLDN 501
           T FY +ETC + +     G   G  + T   + G +         +SL+  Y + G L +
Sbjct: 355 TIFYALETCSKMDRG---GLASGRALHTAMDTAGRVELLSSVEVLNSLLDMYASCGSLID 411

Query: 502 S----FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           +    F+   G + +D+ SW  M++A V  G +  A+ +   +   G K DE  + TIL 
Sbjct: 412 AEAIFFDHLLG-KNVDVVSWTNMIAAYVQHGQSSSALLLAKKMDLEGVKSDEIAMSTILG 470

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN--D 615
           +C A  A    + +H    +LG+ +   V +A++  Y   G +  A   F +  N+N  +
Sbjct: 471 ACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELKNANSPN 530

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
              +  +I  YA  G   +A+ ++++M L  ++P  ATF S+  ACSH G + K    F 
Sbjct: 531 SNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACSHAGFLAKALEHFV 590

Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
            +    G++P+ + +GC+VD+L R+G++ +A+ ++  MP++P    +RSLL+ C   G  
Sbjct: 591 FIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPYEPDIVAWRSLLASC---GGS 647

Query: 736 ELG--EWASEKLLLLLPKNDAAH-VLLS 760
           + G    A+E+ + L P   ++H VLLS
Sbjct: 648 DQGASRRAAEEAVHLQPSGCSSHYVLLS 675



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 156/640 (24%), Positives = 292/640 (45%), Gaps = 43/640 (6%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGF------TNDIFLQNNLIAMYSKCGY 94
           R D + L   L    +L+    G  +H  IV+LG+        D+ + N+L+ MY+KC  
Sbjct: 39  RADEVTLTTLLGACSSLEDLQQGKMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRS 98

Query: 95  FGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV 154
               + +FD M  R++ SWT++V+A  QNG+    ++ Y  M  +G  PN     +++  
Sbjct: 99  LADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAA 158

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C S G    G  I        ++ +  VG +++NFY K G +  A   F  + + +   W
Sbjct: 159 CSSGGELAAGRKIAARVEASGLDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVTW 218

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII- 273
           N MI  Y   G   +A+++ ++M  EG+  D     + L  CS     + G++IH  +I 
Sbjct: 219 NGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILGACS---GLESGKRIHSAVID 275

Query: 274 -RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS--ENKNPGQ 330
            R E++   ++ NAL+ MY +   +D A  VF  +  K+ +SW T+   F+  EN++  +
Sbjct: 276 RRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNTVSWTTIIAAFAQQENRDDIE 335

Query: 331 TA-SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG--------FLDE 381
            A  LF +  L G  P+ VT    L  C K   +D G      ALH           L  
Sbjct: 336 AAFQLFREMDLDGVAPSEVTIFYALETCSK---MDRGGLASGRALHTAMDTAGRVELLSS 392

Query: 382 ENVTSSLIYMFCRCGAVEMAHSV-FDNVSYKN--ITTWNELLSGYCFNCCDADVLKTFCN 438
             V +SL+ M+  CG++  A ++ FD++  KN  + +W  +++ Y  +   +  L     
Sbjct: 393 VEVLNSLLDMYASCGSLIDAEAIFFDHLLGKNVDVVSWTNMIAAYVQHGQSSSALLLAKK 452

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   GV+ +      ++  C   +   +  ++H    + G++S   + ++L+  Y ++G+
Sbjct: 453 MDLEGVKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGR 512

Query: 499 LDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
           +D++   F+    A   +  ++ AM++    QG   +A+++++ +   G +P +    +I
Sbjct: 513 VDDAARVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSI 572

Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS---AVIDAYAKCGDIKGARMAFDQSFN 612
             +C+  G     K++  FV    F      A     V+D   + G ++ A         
Sbjct: 573 FQACSHAGFL--AKALEHFVFIYDFQGLEPTAEHFGCVVDLLGRSGFVREAEELVLAMPY 630

Query: 613 SNDVIVYNTLIMA--YAHHGLVSEAMEIFDKMKLANLQPS 650
             D++ + +L+ +   +  G    A E     +  +LQPS
Sbjct: 631 EPDIVAWRSLLASCGGSDQGASRRAAE-----EAVHLQPS 665



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 118/218 (54%), Gaps = 8/218 (3%)

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
           + R ++ SW  ++SA V   H  +A+ +F ++ + G++ DE  L T+L +C+++   Q+ 
Sbjct: 2   SSRKNVFSWTIIISAYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQG 61

Query: 569 KSIHPFVIKLGF------NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
           K IH  +++LG+        ++ V +++++ YAKC  +  A   FD+  N + V  +  +
Sbjct: 62  KMIHSLIVELGYGEQDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRS-VFSWTIM 120

Query: 623 IMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           + A+A +G +  A++ + +M    + P+  TFV++++ACS  G +  G  +   +++  G
Sbjct: 121 VTAFAQNGQLQRAIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEAS-G 179

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           +         +V+   + G L++A+   + MP + + T
Sbjct: 180 LDSDLIVGSAIVNFYGKCGRLDEAREAFDRMPAKNNVT 217



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 10/192 (5%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D I ++  L      ++  LG ++H    +LG+ ++  + N L+ MY   G      
Sbjct: 458 VKSDEIAMSTILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAA 517

Query: 100 RVFDEMAERNLV---SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           RVF E+   N     ++T +++   + G     L +Y +M  +G  P +    S+ + C 
Sbjct: 518 RVFQELKNANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVEPRDATFTSIFQACS 577

Query: 157 SMG--ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGC 213
             G  A    + +  +  +         GC V++   + G V  AE +  ++  + D+  
Sbjct: 578 HAGFLAKALEHFVFIYDFQGLEPTAEHFGC-VVDLLGRSGFVREAEELVLAMPYEPDIVA 636

Query: 214 WNAMIGGYAHCG 225
           W +++   A CG
Sbjct: 637 WRSLL---ASCG 645


>gi|125539724|gb|EAY86119.1| hypothetical protein OsI_07491 [Oryza sativa Indica Group]
          Length = 787

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 182/714 (25%), Positives = 326/714 (45%), Gaps = 32/714 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           LR D    + +L       S  +G QVH    K+G+   D+F+ N L+ MY+ C   G  
Sbjct: 100 LRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCA 159

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VF  +A  + VSWT ++SA  +NG     L ++++M   G   + + +   ++   S+
Sbjct: 160 EKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSL 219

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G    GY +HC+ +K     + F+   ++ FY +  ++   ++VF  +++ D+  WN +I
Sbjct: 220 GHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVI 279

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      EAL     ++++    D+YT  + L   +    FD GR+IHG +IR+ ++
Sbjct: 280 QCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLD 339

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               +++AL+DMY                     ++W TL       K+         K+
Sbjct: 340 SDKYVMSALMDMY---------------------VNWATL------RKSRSMLPLRMLKY 372

Query: 339 ILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            LS   + +    +  L+ C   LDL  G  L    L      +  V SSL+ M+ +CG+
Sbjct: 373 YLSVQGKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGS 432

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E AH +F          W+ ++SG C N      +  F  +    V+ N  T+  V+  
Sbjct: 433 LEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTA 492

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C    +     +IH   I+ G+ +   +  SLI  Y+  GQ + +          ++ SW
Sbjct: 493 CMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEI-SW 551

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G +       G +   + +FH +  +G   D      IL+SC            H +++K
Sbjct: 552 GTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQAHAYLMK 611

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G ++   +   +ID Y+ CG +  A  AF  +   N    + ++IMA   +G    A+ 
Sbjct: 612 RGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRNTSGRNSS-SWTSIIMASVENGCPETAIR 670

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F +M      P+  +F+SV+ AC+  GLV++    F SM   Y +QPS + Y  ++++L
Sbjct: 671 LFVQMLRKEKSPNSLSFLSVLKACAEIGLVNEAFQFFVSMTEVYKIQPSEEHYSHMIEVL 730

Query: 698 SRNGYLEDAKHVIE-IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            R G  ++A+H I+ ++P +   + +  L S  + +GN +    A+++L  L P
Sbjct: 731 GRAGMFKEAEHFIDSVVPSESGASAWSLLCSAAKQNGNAKTMRLAADRLSKLTP 784



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 229/488 (46%), Gaps = 30/488 (6%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDD--VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           ++  +A+ G +  A + F ++   D  +  W  ++ GYA  G   EAL+++  M+   + 
Sbjct: 42  LMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLR 101

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFK 302
            D + F  AL+ C+      +GRQ+H    +   V   + + N L+ MY     +  A K
Sbjct: 102 PDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEK 161

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  +A  D +SW ++   ++EN    Q   LF + I  G   +  T S+ LR    L  
Sbjct: 162 VFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGH 221

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           + LG QL C  +  GF+  E + + LI  + RC  +++   VFD ++ K++ +WN ++  
Sbjct: 222 VRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQC 281

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N CD + L  F ++     E +  T   ++    R        +IHG +I+ G  S 
Sbjct: 282 YADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSD 341

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ S+L+  YVN+  L  S           M     +   L  QG              
Sbjct: 342 KYVMSALMDMYVNWATLRKS---------RSMLPLRMLKYYLSVQG-------------- 378

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              K D++I+ + L SCA+       + +H  V+K   N + +V S+++D YAKCG ++ 
Sbjct: 379 ---KLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEE 435

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A + F ++ +   V  ++ +I     +G    A+ +F  M+L ++QP++ T+ SV++AC 
Sbjct: 436 AHILFSRTKDPCTV-AWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACM 494

Query: 663 HKGLVDKG 670
             G V  G
Sbjct: 495 ALGDVVSG 502



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 142/642 (22%), Positives = 263/642 (40%), Gaps = 52/642 (8%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           D   Q  L+  +++ G      + FD M   +R+LV+WT+++S    +G     L + + 
Sbjct: 35  DAAPQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLR 94

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLG 194
           M      P+ F     ++ C + G+   G  +H  A K+  +  + FV   ++  YA   
Sbjct: 95  MVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCR 154

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +  AE+VF  I++ D   W +M+  Y   G   +AL +   M+  G++ D YT   AL+
Sbjct: 155 SLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALR 214

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
             S +    +G Q+H  +I+S    S  + N LI+ Y +   +    KVF+ M  KD++S
Sbjct: 215 AASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVS 274

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN +   +++N    +    F   +   +  +  T   +L    +    D G ++    +
Sbjct: 275 WNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLI 334

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   ++ V S+L+ M+     +  + S+      K   +    L  +      A  LK
Sbjct: 335 RAGLDSDKYVMSALMDMYVNWATLRKSRSMLPLRMLKYYLSVQGKLDQFIV----ASSLK 390

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
           +                       C S+     G+ +H  ++K   +   ++ SSL+  Y
Sbjct: 391 S-----------------------CASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMY 427

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G L+ +    +  +     +W A++S     G    A+ +F ++     +P+E+   
Sbjct: 428 AKCGSLEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYT 487

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN- 612
           ++L +C A+G       IH   I+ G+ T   V  ++I  Y + G        F+Q+   
Sbjct: 488 SVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQ-------FNQALRL 540

Query: 613 ----SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
               SN  I + TL   +A  G     + +F  ++ +       T   ++S+C  K  + 
Sbjct: 541 CLSLSNSEISWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLP 600

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGC----LVDMLSRNGYLEDA 706
           +G          Y M+      GC    L+DM S  G L  A
Sbjct: 601 EGL-----QAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHA 637



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 13/232 (5%)

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLD--MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           L++++   G++  + +  +     D  + +W  +MS     G   EA+ +   +VE   +
Sbjct: 42  LMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLR 101

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARM 605
           PD ++    L +CAA G+    + +H    K+G+   +++VA+ ++  YA C  +  A  
Sbjct: 102 PDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEK 161

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F     + D + + +++ AY  +G  ++A+ +F +M    +     T    + A S  G
Sbjct: 162 VFS-GIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLG 220

Query: 666 LVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            V  G    C + KS     G  PS     CL++   R   L+  + V + M
Sbjct: 221 HVRLGYQLHCYMIKS-----GFVPSEFLENCLIEFYGRCRELQLMQKVFDEM 267


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 278/582 (47%), Gaps = 16/582 (2%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--YGFEALNVVSSMLFEGITMDKYTFIN 251
           G ++ A  +F  I S DV  +N +I  Y+        + L++   ML   +  + YTF  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           AL+ CS +AD   GR IH   I + ++  + +  AL+DMY+K + +  A  +F  M  +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 312 VISWNTLFGGFSENKNPGQTAS--LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +++WN +  G++ +       +  L  +  +   RPN  T   LL    +   L  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 370 QCLALHCGFLDEENVTS----------SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
               +        N  S          +L+ M+ +CG++  A  VFD +  +N  TW+ L
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 420 LSGYCFNCCDADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           + G+            F  +   G+  ++  +    +  C   ++ +M  Q+H  + K+G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +     +SL+  Y   G +D +    +     D  S+ A++S  V  G   EA  +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +     +PD   + +++ +C+ + A Q  +  H  VI  G  +E  + +A+ID YAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            I  +R  F+    S D++ +NT+I  Y  HGL  EA  +F +M      P   TF+ ++
Sbjct: 491 RIDLSRQVFNM-MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GLV +G   F  M   YG+ P  + Y C+VD+LSR G+L++A   I+ MP +  
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ +LL  CR++ N +LG+  S  +  L P+     VLLS
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 651



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 227/479 (47%), Gaps = 21/479 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H H +  G   D+F+   L+ MY KC        +F  M  R+LV+W  +++    
Sbjct: 144 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 203

Query: 123 NGEFDMGLK--MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +G +   +   + + M+ +   PN   + +++ +    GA   G S+H + ++  +  N 
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNR 263

Query: 181 ----------FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                      +G ++L+ YAK G +  A RVF ++ + +   W+A+IGG+  C    +A
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323

Query: 231 LNVVSSMLFEGIT-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
             +  +ML +G+  +   +  +AL+ C+ +    +G Q+H L+ +S V   ++  N+L+ 
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K+  +D A  +F+ MA KD +S++ L  G+ +N    +   +F K       P+  T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              L+  C  L  L  G       +  G   E ++ ++LI M+ +CG ++++  VF+ + 
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            ++I +WN +++GY  +    +    F  +   G   +G TF  ++  C  S    + G+
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHS-GLVIEGK 562

Query: 470 IHGAIIKTGFSSCG----YICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
               +++ G+        YIC  ++      G LD ++EF      R D+  W A++ A
Sbjct: 563 HWFHVMRHGYGLTPRMEHYIC--MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 619



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 19/488 (3%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM--GLKMYVDMKTNGFMPNEFAVGS 150
           G+      +FD++   ++ ++  ++ A   +       GL +Y  M  +   PN +    
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +K C ++     G +IH  A+   ++ + FV  ++L+ Y K   +  A  +F ++ + D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GITMDKYTFINALQGCSLVADFDIGRQI 268
           +  WNAM+ GYAH G    A+  + SM  +   +  +  T +  L   +       G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 269 HGLIIR----------SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           H   IR          S++   + +  AL+DMY K   + YA +VF+ M  ++ ++W+ L
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 319 FGGFSENKNPGQTASLFHKFILSG---SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            GGF       Q   LF   +  G     P  +  +  LR C  L  L +G QL  L   
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACASLDHLRMGEQLHALLAK 368

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G   +    +SL+ M+ + G ++ A ++FD ++ K+  +++ L+SGY  N    +    
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +    VE +  T   ++  C      Q     HG++I  G +S   IC++LI  Y  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G++D S +  N     D+ SW  M++     G   EA  +F  +   G  PD      +
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 556 LNSCAAIG 563
           L++C+  G
Sbjct: 549 LSACSHSG 556



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 148/329 (44%), Gaps = 11/329 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV----------KLGFTNDIFLQNNLIAMY 89
           LR +   L   L L     +   GT VH + +          K   T+ + L   L+ MY
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMY 283

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAV 148
           +KCG   +  RVFD M  RN V+W+ ++   +          ++  M   G    +  ++
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            S ++ C S+     G  +H    K  +  +   G S+L+ YAK G +  A  +F  ++ 
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            D   ++A++ GY   G   EA  V   M    +  D  T ++ +  CS +A    GR  
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG +I   +    SI NALIDMY K   +D + +VF  M  +D++SWNT+  G+  +   
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQC 357
            +  +LF +    G  P+ VTF  LL  C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSAC 552


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/653 (27%), Positives = 306/653 (46%), Gaps = 72/653 (11%)

Query: 176 IEKNPFV-----GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           +   PF+     G  V+  Y   G    A  V   ++      WN +I  +   G    A
Sbjct: 80  LPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSA 139

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           +NV   ML  G   D +T  + L+ C  +  +  G   HGLI  +  E ++ I NAL+ M
Sbjct: 140 INVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAM 199

Query: 291 YIKSSGMDYAFKVFERMADK---DVISWNTLFGGFSENKNPGQTASLFHKFIL------S 341
           Y +   ++ A  +F+ +  +   DVISWN++     ++ N      LF K  L      +
Sbjct: 200 YSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPT 259

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             R + ++   +L  CG L  +    ++   A+  G   +  V ++LI  + +CG +E A
Sbjct: 260 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 319

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV----ET 457
             VF+ + +K++ +WN +++GY  +       + F N+ +  + ++  T+  V+    + 
Sbjct: 320 VKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQR 379

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYI------CSSL--------IKSYV--------- 494
            C  E   +  Q+   I      +C  I      C+SL        I +Y          
Sbjct: 380 GCSHEALNLFRQM---IFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 436

Query: 495 -NFGQLDNSFEFSNGA----------------------ERLDMASWGAMMSALVHQGHNH 531
            +FG  D      N                        E  ++ +W  M+      G ++
Sbjct: 437 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 496

Query: 532 EAVTIFHSLVEA--GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVA 587
           +A+ +F  ++    G  P+ Y +  IL +CA + A +  K IH +V++     ++  +VA
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 556

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           + +ID Y+KCGD+  AR  FD S +    I + +++  Y  HG  SEA++IFDKM+ A  
Sbjct: 557 NCLIDMYSKCGDVDTARHVFD-SMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615

Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
            P   TF+ V+ ACSH G+VD+G   F SM + YG+ P  + Y C +D+L+R+G L+ A 
Sbjct: 616 VPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAW 675

Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             ++ MP +P+  V+ +LLS CR+H N EL E A  KL+ +  +ND ++ L+S
Sbjct: 676 RTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 728



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 158/677 (23%), Positives = 275/677 (40%), Gaps = 65/677 (9%)

Query: 75  FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
           F +   L   ++A Y  CG   + L V + +     V W L++   I+ G  D  + +  
Sbjct: 85  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 144

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
            M   G  P+ F +  V+K C  + +   G + H        E N F+  +++  Y++ G
Sbjct: 145 RMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 204

Query: 195 DVAAAERVFYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSSM---LFEGITMDK-- 246
            +  A  +F  I+    DDV  WN+++  +      + AL++ S M   + E  T ++  
Sbjct: 205 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 264

Query: 247 -YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             + +N L  C  +      +++HG  IR+     + + NALID Y K   M+ A KVF 
Sbjct: 265 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFN 324

Query: 306 RMADKDVISWNTLFGGFSENKN-----------------------------------PGQ 330
            M  KDV+SWN +  G+S++ N                                     +
Sbjct: 325 MMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHE 384

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN------- 383
             +LF + I SGS PN VT   +L  C  L     G ++   +L    L  +N       
Sbjct: 385 ALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE 444

Query: 384 ---VTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCN 438
              V ++LI M+ +C + + A S+FD++    +N+ TW  ++ G+       D LK F  
Sbjct: 445 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 504

Query: 439 IWES--GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--SSCGYICSSLIKSYV 494
           +     GV  N  T   ++  C      ++  QIH  +++     SS  ++ + LI  Y 
Sbjct: 505 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYS 564

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G +D +    +   +    SW +MM+     G   EA+ IF  + +AG  PD+     
Sbjct: 565 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLV 624

Query: 555 ILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +L +C+  G   +  S         G        +  ID  A+ G +  A          
Sbjct: 625 VLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPME 684

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCL 672
              +V+  L+ A   H  V  A    +K+   N +   + T +S + A + +    K   
Sbjct: 685 PTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRW---KDVA 741

Query: 673 LFKSMDSQYGMQPSPDC 689
             + +  + G++  P C
Sbjct: 742 RIRHLMKKSGIKKRPGC 758



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 215/479 (44%), Gaps = 62/479 (12%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D   L   L     L S   G+  HG I   GF +++F+ N L+AMYS+CG       
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211

Query: 101 VFDEMAER---NLVSWTLIVSAAIQNGEFDMGLKMYVDM------KTNGFMPNEFAVGSV 151
           +FDE+ +R   +++SW  IVSA +++      L ++  M      K      +  ++ ++
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C S+ A      +H  A++     + FVG ++++ YAK G +  A +VF  +   DV
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331

Query: 212 GCWNAMIGGYAHCG----------------------------YGF-------EALNVVSS 236
             WNAM+ GY+  G                             G+       EALN+   
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQ 391

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-----------EVECSISIVN 285
           M+F G   +  T I+ L  C+ +  F  G +IH   +++           E E  + + N
Sbjct: 392 MIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDE-DLMVYN 450

Query: 286 ALIDMYIKSSGMDYAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-- 341
           ALIDMY K      A  +F+   + +++V++W  + GG ++  +      LF + I    
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN--VTSSLIYMFCRCGAVE 399
           G  PN  T S +L  C  L  + +G Q+    L     +     V + LI M+ +CG V+
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
            A  VFD++S K+  +W  +++GY  +   ++ L  F  + ++G   +  TF  V+  C
Sbjct: 571 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC 629



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 32/302 (10%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKL----------GFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           LS   +L +   GT++H + +K           G   D+ + N LI MYSKC  F     
Sbjct: 408 LSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 467

Query: 101 VFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEFAVGSVMKVCV 156
           +FD++   ERN+V+WT+++    Q G+ +  LK++V+M  +  G  PN + +  ++  C 
Sbjct: 468 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 527

Query: 157 SMGASEFGYSIHCFALKI-RIEKNP-FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
            + A   G  IH + L+  R E +  FV   +++ Y+K GDV  A  VF S+S      W
Sbjct: 528 HLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISW 587

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-------VADFDIGRQ 267
            +M+ GY   G G EAL++   M   G   D  TF+  L  CS        ++ FD    
Sbjct: 588 TSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSA 647

Query: 268 IHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSEN 325
            +GL  R+E   C+       ID+  +S  +D A++  + M  +   + W  L      +
Sbjct: 648 DYGLTPRAEHYACA-------IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 700

Query: 326 KN 327
            N
Sbjct: 701 SN 702


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 177/624 (28%), Positives = 304/624 (48%), Gaps = 29/624 (4%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P   +   ++  C      + G +IH   L+     + ++  S++N YAK G +  A+ V
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 203 FYSISSDDVGCWNAMIGGYAH---CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           F SI++ DV  WN +I GY+     GY F  + +   M  E    + +TF       S  
Sbjct: 68  FESITNKDVVSWNCLINGYSQKGTVGYSF-VMELFQRMRAENTLPNGHTFSGVFTAASSS 126

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            +   G Q H L I++     + + ++LI+MY K   M  A KVF+ + +++ +SW T+ 
Sbjct: 127 PETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL---GLQLQCLALHC 376
            G++  +   +   LF   ++      H  F I       L   DL   G Q+ CLAL  
Sbjct: 187 SGYAMERMAFEAWELF--LLMRREEGAHDKF-IYTSVLSALTVPDLVHYGKQIHCLALKN 243

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           G L   +V ++L+ M+ +CG ++ A   F+    K+  TW+ +++GY       + L  F
Sbjct: 244 GLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLF 303

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
            N+  +G + +  TF  V+  C      +   QIHG  +K G+    Y            
Sbjct: 304 YNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKC 363

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G L ++ +  +  +  D+  W +    +       E +            P E  + ++L
Sbjct: 364 GSLVDARKGFDYLKEPDIVLWTSCRMQM-------ERIM-----------PHELTMASVL 405

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
            +C+++ A ++ K IH   IK GF+ EV + SA+   YAKCG ++   + F +   S D+
Sbjct: 406 RACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVF-RRMPSRDI 464

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           + +N +I   + +G   +A+E+F++++    +P   TFV+V+SACSH GLV++G + F+ 
Sbjct: 465 MTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRM 524

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKE 736
           M  ++G+ P  + Y C+VD+LSR G L + K  IE         ++R LL  CR + N E
Sbjct: 525 MLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYE 584

Query: 737 LGEWASEKLLLLLPKNDAAHVLLS 760
           LG +A EKL+ L  +  +A++LLS
Sbjct: 585 LGAYAGEKLMELGSQESSAYILLS 608



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 247/542 (45%), Gaps = 23/542 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +++ G  + ++L N+L+ +Y+KCG       VF+ +  +++VSW  +++   Q
Sbjct: 29  GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQ 88

Query: 123 NGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            G   +   ++++  M+    +PN      V     S   +  G   H  A+K     + 
Sbjct: 89  KGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDV 148

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG S++N Y K+G +  A +VF +I   +   W  +I GYA     FEA  +   M  E
Sbjct: 149 FVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRRE 208

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
               DK+ + + L   ++      G+QIH L +++ +    S+ NAL+ MY K   +D A
Sbjct: 209 EGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDA 268

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
           FK FE   DKD I+W+ +  G+++  +  +  +LF+   L+G++P+  TF  ++  C  +
Sbjct: 269 FKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDI 328

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L+ G Q+   +L  G+  +        Y+  +CG++  A   FD +   +I  W    
Sbjct: 329 GALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLW---- 384

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
                         T C +    +  +  T   V+  C      +   QIH   IK GFS
Sbjct: 385 --------------TSCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFS 430

Query: 481 SCGYICSSLIKSYVNFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               I S+L   Y   G L D +  F     R D+ +W AM+S L   G   +A+ +F  
Sbjct: 431 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR-DIMTWNAMISGLSQNGEGLKALELFEE 489

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKCG 598
           L     KPD      +L++C+ +G  +R K     ++ + G    V   + ++D  ++ G
Sbjct: 490 LRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAG 549

Query: 599 DI 600
            +
Sbjct: 550 KL 551



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +A  L    +L +   G Q+H   +K GF+ ++ + + L  MY+KCG    G  VF  M 
Sbjct: 401 MASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 460

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
            R++++W  ++S   QNGE    L+++ +++     P+     +V+  C  MG  E G
Sbjct: 461 SRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG 518


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 278/582 (47%), Gaps = 16/582 (2%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--YGFEALNVVSSMLFEGITMDKYTFIN 251
           G ++ A  +F  I S DV  +N +I  Y+        + L++   ML   +  + YTF  
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           AL+ CS +AD   GR IH   I + ++  + +  AL+DMY+K + +  A  +F  M  +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 312 VISWNTLFGGFSENKNPGQTAS--LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           +++WN +  G++ +       +  L  +  +   RPN  T   LL    +   L  G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 370 QCLALHCGFLDEENVTS----------SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
               +        N  S          +L+ M+ +CG++  A  VFD +  +N  TW+ L
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 420 LSGYCFNCCDADVLKTFCNIWESGV-EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           + G+            F  +   G+  ++  +    +  C   ++ +M  Q+H  + K+G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
             +     +SL+  Y   G +D +    +     D  S+ A++S  V  G   EA  +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +     +PD   + +++ +C+ + A Q  +  H  VI  G  +E  + +A+ID YAKCG
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
            I  +R  F+    S D++ +NT+I  Y  HGL  EA  +F +M      P   TF+ ++
Sbjct: 491 RIDLSRQVFNM-MPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           SACSH GLV +G   F  M   YG+ P  + Y C+VD+LSR G+L++A   I+ MP +  
Sbjct: 550 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609

Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             V+ +LL  CR++ N +LG+  S  +  L P+     VLLS
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLS 651



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 227/482 (47%), Gaps = 27/482 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H H +  G   D+F+   L+ MY KC        +F  M  R+LV+W  +++    
Sbjct: 144 GRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAH 203

Query: 123 NGEFDMGLK--MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           +G +   +   + + M+ +   PN   + +++ +    GA   G S+H + ++  +  N 
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 263

Query: 181 ----------FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                      +G ++L+ YAK G +  A RVF ++ + +   W+A+IGG+  C    +A
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323

Query: 231 LNVVSSMLFEGIT-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
             +  +ML +G+  +   +  +AL+ C+ +    +G Q+H L+ +S V   ++  N+L+ 
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K+  +D A  +F+ MA KD +S++ L  G+ +N    +   +F K       P+  T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
              L+  C  L  L  G       +  G   E ++ ++LI M+ +CG ++++  VF+ + 
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQ- 464
            ++I +WN +++GY  +    +    F  +   G   +G TF  ++  C  S    E + 
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 563

Query: 465 --QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMM 521
              ++G  +G   +       YIC  ++      G LD ++EF      R D+  W A++
Sbjct: 564 WFHVMGHGYGLTPRMEH----YIC--MVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617

Query: 522 SA 523
            A
Sbjct: 618 GA 619



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 19/488 (3%)

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM--GLKMYVDMKTNGFMPNEFAVGS 150
           G+      +FD++   ++ ++  ++ A   +       GL +Y  M  +   PN +    
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
            +K C ++     G +IH  A+   ++ + FV  ++L+ Y K   +  A  +F ++ + D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GITMDKYTFINALQGCSLVADFDIGRQI 268
           +  WNAM+ GYAH G    A+  + SM  +   +  +  T +  L   +       G  +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 269 HGLIIR----------SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           H   IR          S++   + +  AL+DMY K   + YA +VF+ M  ++ ++W+ L
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 319 FGGFSENKNPGQTASLFHKFILSG---SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            GGF       Q   LF   +  G     P  +  +  LR C  L  L +G QL  L   
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASA--LRACASLDHLRMGEQLHALLAK 368

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G   +    +SL+ M+ + G ++ A ++FD ++ K+  +++ L+SGY  N    +    
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +    VE +  T   ++  C      Q     HG++I  G +S   IC++LI  Y  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAK 488

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G++D S +  N     D+ SW  M++     G   EA  +F  +   G  PD      +
Sbjct: 489 CGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICL 548

Query: 556 LNSCAAIG 563
           L++C+  G
Sbjct: 549 LSACSHSG 556



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 148/329 (44%), Gaps = 11/329 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV----------KLGFTNDIFLQNNLIAMY 89
           LR +   L   L L     +   GT VH + +          K   T+ + L   L+ MY
Sbjct: 224 LRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMY 283

Query: 90  SKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAV 148
           +KCG   +  RVFD M  RN V+W+ ++   +          ++  M   G    +  ++
Sbjct: 284 AKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSI 343

Query: 149 GSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS 208
            S ++ C S+     G  +H    K  +  +   G S+L+ YAK G +  A  +F  ++ 
Sbjct: 344 ASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAV 403

Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
            D   ++A++ GY   G   EA  V   M    +  D  T ++ +  CS +A    GR  
Sbjct: 404 KDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCS 463

Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
           HG +I   +    SI NALIDMY K   +D + +VF  M  +D++SWNT+  G+  +   
Sbjct: 464 HGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLG 523

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQC 357
            +  +LF +    G  P+ VTF  LL  C
Sbjct: 524 KEATALFLEMNNLGFPPDGVTFICLLSAC 552


>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
 gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
          Length = 694

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/667 (25%), Positives = 311/667 (46%), Gaps = 44/667 (6%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLG 194
           M  +   PN     ++++ C S    E G  IH     +++ E +  V  +V+  Y K  
Sbjct: 1   MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEGITMDKYTFINAL 253
               A  VF  +   D+  WN  I   A  G Y F  L ++ SM  EG+  DK TF++AL
Sbjct: 61  RADLAMAVFSEMRERDLISWNNAIAANAESGDYTF-TLALLKSMQLEGMAPDKVTFVSAL 119

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C        GR IH L++   +E  + +  AL+ MY +   ++ A ++F RM +++V+
Sbjct: 120 NACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVV 179

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           SWN +    + N +  +   LF + + ++   P  V+F  +L        L  G ++  +
Sbjct: 180 SWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEM 239

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
                 L +  V ++L+ M+ RCG V  A  VF  +  +++ +WN ++S Y  +    +V
Sbjct: 240 IQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLACEV 299

Query: 433 LKTFCNI-------------WES------------------------GVEVNGCTFFYVV 455
           +  F  +             W +                        G+  N  TF  ++
Sbjct: 300 VNLFHRMRAERSMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVTFMSLL 359

Query: 456 ETCCRSENQQMVGQIHGAIIKTG--FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
             C      +    IH  +I      SS   + ++++  Y   G+LD +          +
Sbjct: 360 SVCDSRALLRQGETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRN 419

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           +ASW +M+SA    G   +A  +   +   G  PD     T+LN+C A GA ++ K IH 
Sbjct: 420 LASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQGKMIHA 479

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
            +I  G   +  VA+A+++ Y+KCG++  A   F  + +  DV+ +N +I  +AH+G   
Sbjct: 480 RIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFG-ALDYRDVVSWNGIIAGFAHNGHAR 538

Query: 634 EAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCL 693
           EA++    M+   ++P   TF++++SA SH G + +G   F SM   + ++   + YGC+
Sbjct: 539 EALKSMWLMQQDGVRPDAITFLTILSASSHAGFLRQGGDDFVSMAVDHELERGVEHYGCM 598

Query: 694 VDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           +D+L R G + +A++ +  M  +     + +LLS C +HG++E  +  +  ++ + P++ 
Sbjct: 599 IDLLGRAGRIGEAEYFVSAMRDEDKEVSWMTLLSACEVHGDEERAKRVAGSIVEMNPQHS 658

Query: 754 AAHVLLS 760
           +A+V LS
Sbjct: 659 SAYVALS 665



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/632 (23%), Positives = 269/632 (42%), Gaps = 42/632 (6%)

Query: 63  GTQVHGHIVKLGF-TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G Q+H  +  L    +D+ + N ++ MY KC      + VF EM ER+L+SW   ++A  
Sbjct: 29  GKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANA 88

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++G++   L +   M+  G  P++    S +  C+   +   G  IH   L+  +E +  
Sbjct: 89  ESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVV 148

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +G +++  Y + G + +A  +F+ +   +V  WNAM+       +  EA+ +   M+   
Sbjct: 149 LGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVA 208

Query: 242 -ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +   + +FI  L   +       GR+IH +I   ++   I + NAL+ MY +  G+  A
Sbjct: 209 MVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQIEVANALVTMYGRCGGVGDA 268

Query: 301 FKVF------------------------------------ER-MADKDVISWNTLFGGFS 323
            +VF                                    ER MA +DVISWNT+  G+ 
Sbjct: 269 ERVFSAMERRDLVSWNAMISAYAQSGLACEVVNLFHRMRAERSMAARDVISWNTMITGYV 328

Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEE 382
           +  +P    S+F + +L G R N VTF  LL  C     L  G  + +C+      L  +
Sbjct: 329 QAGDPFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRALLRQGETIHRCVIDQTPELSSD 388

Query: 383 N-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
             V ++++ M+ +CG ++ A  +F++ S++N+ +WN ++S Y  +            +  
Sbjct: 389 PIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRR 448

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV  +  TF  ++  C      +    IH  II +G      + ++L+  Y   G LD 
Sbjct: 449 EGVLPDRVTFITLLNACVAGGAVRQGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDT 508

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +       +  D+ SW  +++   H GH  EA+     + + G +PD     TIL++ + 
Sbjct: 509 ATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDGVRPDAITFLTILSASSH 568

Query: 562 IG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            G   Q         +       V     +ID   + G I  A        + +  + + 
Sbjct: 569 AGFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGEAEYFVSAMRDEDKEVSWM 628

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
           TL+ A   HG    A  +   +   N Q S A
Sbjct: 629 TLLSACEVHGDEERAKRVAGSIVEMNPQHSSA 660



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/578 (23%), Positives = 242/578 (41%), Gaps = 76/578 (13%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +++ G   D+ L   L+ MY +CG       +F  M ERN+VSW  +V++   
Sbjct: 131 GRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTL 190

Query: 123 NGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           N  F   ++++  M     + P   +  +V+    +  A   G  IH    + ++     
Sbjct: 191 NAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTREALAEGRRIHEMIQERQLLSQIE 250

Query: 182 VGCSVLNFYAKLGDVAAAERVF-------------------------------------Y 204
           V  +++  Y + G V  AERVF                                      
Sbjct: 251 VANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLACEVVNLFHRMRAER 310

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
           S+++ DV  WN MI GY   G  F AL++   ML EGI  ++ TF++ L  C   A    
Sbjct: 311 SMAARDVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRALLRQ 370

Query: 265 GRQIHGLIIRSEVECSIS--IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGF 322
           G  IH  +I    E S    +  A+++MY K   +D A  +FE  + +++ SWN++   +
Sbjct: 371 GETIHRCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAY 430

Query: 323 SENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
           + +    Q   L  +    G  P+ VTF  LL  C     +  G  +    +  G   + 
Sbjct: 431 ALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGGAVRQGKMIHARIIDSGLEKDT 490

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V ++L+  + +CG ++ A S+F  + Y+++ +WN +++G+  N    + LK+   + + 
Sbjct: 491 VVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQD 550

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           GV  +  TF  ++               H   ++ G                +F  +   
Sbjct: 551 GVRPDAITFLTILSASS-----------HAGFLRQGGD--------------DFVSMAVD 585

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            E   G E      +G M+  L   G   EA   F S +   +K   ++  T+L++C   
Sbjct: 586 HELERGVEH-----YGCMIDLLGRAGRIGEA-EYFVSAMRDEDKEVSWM--TLLSACEVH 637

Query: 563 GAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGD 599
           G  +R K +   ++++   ++  YV  A+ + YA CGD
Sbjct: 638 GDEERAKRVAGSIVEMNPQHSSAYV--ALSNLYATCGD 673


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 252/510 (49%), Gaps = 8/510 (1%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSE 324
           QIH  II +       + N LI++Y K   ++ A  +F       K +++W +L    S 
Sbjct: 163 QIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSH 222

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
                Q  SLF++   SG  PN  TFS +L      + +  G QL  L    GF     V
Sbjct: 223 FNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFV 282

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESG 443
            ++L+ M+ +C  +  A  VFD +  +N+ +WN ++ G+  N      +  F ++  E  
Sbjct: 283 GTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKT 342

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
           V  N  +   V+  C          Q+HG ++K G     Y+ +SL+  Y      D   
Sbjct: 343 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGV 402

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +        D+ +W  ++   V      EA   F  +   G  PDE    T+L+S A++ 
Sbjct: 403 KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLA 462

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  +  +IH  +IKLG+   + +  ++I  YAKCG +  A   F +    ++VI +  +I
Sbjct: 463 ALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVF-EGIEDHNVISWTAMI 521

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            AY  HG  ++ +E+F+ M    ++PS  TFV V+SACSH G V++G   F SM   + M
Sbjct: 522 SAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDM 581

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            P P+ Y C+VD+L R G+L++AK  IE MP +P+P+V+ +LL  CR +GN ++G  A+E
Sbjct: 582 NPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAE 641

Query: 744 KLLLLLPKNDAAHVLL----SKRKRQREGN 769
           +L  + P N   +VLL    ++  R  E N
Sbjct: 642 RLFEMEPYNPGNYVLLANMCTRSGRLEEAN 671



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 207/414 (50%), Gaps = 5/414 (1%)

Query: 53  LSENLKSRVL--GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE--R 108
           L+  +++R L   TQ+H  I+   +T+  FL NNLI +Y+KCG     L +F       +
Sbjct: 149 LNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFK 208

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            +V+WT +++           L ++  M+ +G  PN+F   S++    +      G  +H
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLH 268

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
               K   + N FVG ++++ YAK  D+ +A RVF  +   ++  WN+MI G+ H     
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD 328

Query: 229 EALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
            A+ V   +L E   + ++ +  + L  C+ +   + GRQ+HG++++  +     ++N+L
Sbjct: 329 RAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSL 388

Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
           +DMY K    D   K+F+ + D+DV++WN L  GF +N    +  + F      G  P+ 
Sbjct: 389 MDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDE 448

Query: 348 VTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDN 407
            +FS +L     L  L  G  +    +  G++    +  SLI M+ +CG++  A+ VF+ 
Sbjct: 449 ASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEG 508

Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           +   N+ +W  ++S Y  + C   V++ F ++   G+E +  TF  V+  C  +
Sbjct: 509 IEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHT 562



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 126/539 (23%), Positives = 241/539 (44%), Gaps = 43/539 (7%)

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           PF+  +++N YAK G +  A  + +SI+      +  W ++I   +H     +AL++ + 
Sbjct: 177 PFLFNNLINLYAKCGCLNQA-LLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQ 235

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M   G   +++TF + L   +       G+Q+H LI +   + +I +  AL+DMY K + 
Sbjct: 236 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 295

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLR 355
           M  A +VF++M +++++SWN++  GF  N    +   +F   +   +  PN V+ S +L 
Sbjct: 296 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 355

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  +  L+ G Q+  + +  G +    V +SL+ M+ +C   +    +F  V  +++ T
Sbjct: 356 ACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVT 415

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
           WN L+ G+  N    +    F  +   G+  +  +F  V+ +            IH  II
Sbjct: 416 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 475

Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           K G+     I  SLI  Y   G L ++++   G E  ++ SW AM+SA    G  ++ + 
Sbjct: 476 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIE 535

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
           +F  ++  G +P       +L++C+  G                    V    A  ++  
Sbjct: 536 LFEHMLSEGIEPSHVTFVCVLSACSHTG-------------------RVEEGLAHFNSMK 576

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           K  D+                  Y  ++      G + EA    + M    ++P+ + + 
Sbjct: 577 KIHDMNPGPEH------------YACMVDLLGRAGWLDEAKRFIESMP---MKPTPSVWG 621

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQP-SPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           +++ AC   G +  G    ++ +  + M+P +P  Y  L +M +R+G LE+A  V  +M
Sbjct: 622 ALLGACRKYGNLKMG---REAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLM 677



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 138/287 (48%), Gaps = 14/287 (4%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + ++  LS   N+     G QVHG +VK G     ++ N+L+ MY KC +F  G+++F
Sbjct: 346 NEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLF 405

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             + +R++V+W ++V   +QN +F+     +  M+  G +P+E +  +V+    S+ A  
Sbjct: 406 QCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALH 465

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G +IH   +K+   KN  +  S++  YAK G +  A +VF  I   +V  W AMI  Y 
Sbjct: 466 QGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQ 525

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL-------VADFDIGRQIHGLIIRS 275
             G   + + +   ML EGI     TF+  L  CS        +A F+  ++IH +    
Sbjct: 526 LHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGP 585

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGG 321
           E          ++D+  ++  +D A +  E M  K   S W  L G 
Sbjct: 586 EHYA------CMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGA 626



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 2/164 (1%)

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L  +LN+     + +    IH  +I   + +  ++ + +I+ YAKCG +  A + F  + 
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204

Query: 612 NS-NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
           +    ++ + +LI   +H  +  +A+ +F++M+ +   P+Q TF S++SA +   +V  G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
             L  S+  ++G   +      LVDM ++   +  A  V + MP
Sbjct: 265 QQL-HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP 307


>gi|302783573|ref|XP_002973559.1| hypothetical protein SELMODRAFT_99957 [Selaginella moellendorffii]
 gi|300158597|gb|EFJ25219.1| hypothetical protein SELMODRAFT_99957 [Selaginella moellendorffii]
          Length = 573

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/516 (29%), Positives = 273/516 (52%), Gaps = 13/516 (2%)

Query: 234 VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV-ECSISIVNALIDMYI 292
           V  + + GI ++ Y +   LQ C+ ++    GR+IH  I R    + ++ + N L+++Y 
Sbjct: 44  VQELEWNGINLEPYAYEELLQACARLSALHEGRRIHSHIARCGFGDRALFLQNTLLNVYA 103

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +  A ++ E M  ++ +SWN + GGF+ + +  +   +F K +L G RP  +TF+ 
Sbjct: 104 KCGSVRDAIELLESMELRNAVSWNVVIGGFARSGHRQEALEIFGKMMLEGVRPGRITFTN 163

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEEN------VTSSLIYMFCRCGAVEMAHSVFD 406
            L  C     L LG  +       G  D+E       + + LI M+ RCG +  A  V+ 
Sbjct: 164 ALLACEGEEFLPLGRIIHSSIQEAGITDQEEEEKAVELGNGLIAMYGRCGDLAAATQVYY 223

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            V  + I +WN +++ Y  +    +  + F  +  +G + +  TF  ++  C  S   Q 
Sbjct: 224 GVRQRTIVSWNSIIAAYAQSGHSKEAFQFFQELLANGTKPSSVTFLAILPACSSS---QE 280

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALV 525
           V      I + G  S   + + LI +Y   G L+NS   F+      D+ +W + M++  
Sbjct: 281 VDVFSALIREAGLESDVLVSTCLITTYGKAGSLENSRRAFAELELSDDVLAWTSAMTSCS 340

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            +G + +++ IF  +   G  P  + L   L SCA +G Y++  SIH  V+ L   ++ +
Sbjct: 341 QKGLDRDSLAIFRQMQLQGIHPTSFTLAVALESCAKLGDYEQGSSIHR-VMALQCKSDEF 399

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           VA+A+++ Y++CGD+  AR  FD  F  + +++   LI  Y+ +G  + A++ +  M+L 
Sbjct: 400 VATALVNLYSRCGDLAAARAVFD-GFQGSTLVLATALIAGYSRNGDGTAALQAYQLMQLH 458

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
              P+  TFV+++SACSH GL+D+G   F++M +++ ++ +   YGC+VD+L+R G+LE+
Sbjct: 459 GDAPNDVTFVTILSACSHAGLLDEGVGYFQAMAAEHSIEATAQHYGCVVDLLARLGHLEE 518

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           A+ +IE MPF P    + +LL G R HG+   GE A
Sbjct: 519 AEEIIEEMPFLPGSVDWLTLLGGNRNHGDLRQGERA 554



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 182/405 (44%), Gaps = 14/405 (3%)

Query: 63  GTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G ++H HI + GF +  +FLQN L+ +Y+KCG     + + + M  RN VSW +++    
Sbjct: 75  GRRIHSHIARCGFGDRALFLQNTLLNVYAKCGSVRDAIELLESMELRNAVSWNVVIGGFA 134

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI----- 176
           ++G     L+++  M   G  P      + +  C        G  IH    +  I     
Sbjct: 135 RSGHRQEALEIFGKMMLEGVRPGRITFTNALLACEGEEFLPLGRIIHSSIQEAGITDQEE 194

Query: 177 -EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
            EK   +G  ++  Y + GD+AAA +V+Y +    +  WN++I  YA  G+  EA     
Sbjct: 195 EEKAVELGNGLIAMYGRCGDLAAATQVYYGVRQRTIVSWNSIIAAYAQSGHSKEAFQFFQ 254

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            +L  G      TF+  L  CS   + D+      LI  + +E  + +   LI  Y K+ 
Sbjct: 255 ELLANGTKPSSVTFLAILPACSSSQEVDV---FSALIREAGLESDVLVSTCLITTYGKAG 311

Query: 296 GMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            ++ + + F  +    DV++W +     S+      + ++F +  L G  P   T ++ L
Sbjct: 312 SLENSRRAFAELELSDDVLAWTSAMTSCSQKGLDRDSLAIFRQMQLQGIHPTSFTLAVAL 371

Query: 355 RQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
             C KL D + G  + + +AL C    +E V ++L+ ++ RCG +  A +VFD      +
Sbjct: 372 ESCAKLGDYEQGSSIHRVMALQCK--SDEFVATALVNLYSRCGDLAAARAVFDGFQGSTL 429

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
                L++GY  N      L+ +  +   G   N  TF  ++  C
Sbjct: 430 VLATALIAGYSRNGDGTAALQAYQLMQLHGDAPNDVTFVTILSAC 474



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/437 (22%), Positives = 197/437 (45%), Gaps = 12/437 (2%)

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKL 193
           +++ NG     +A   +++ C  + A   G  IH    +    ++  F+  ++LN YAK 
Sbjct: 46  ELEWNGINLEPYAYEELLQACARLSALHEGRRIHSHIARCGFGDRALFLQNTLLNVYAKC 105

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G V  A  +  S+   +   WN +IGG+A  G+  EAL +   M+ EG+   + TF NAL
Sbjct: 106 GSVRDAIELLESMELRNAVSWNVVIGGFARSGHRQEALEIFGKMMLEGVRPGRITFTNAL 165

Query: 254 QGCSLVADFDIGRQIH------GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
             C       +GR IH      G+  + E E ++ + N LI MY +   +  A +V+  +
Sbjct: 166 LACEGEEFLPLGRIIHSSIQEAGITDQEEEEKAVELGNGLIAMYGRCGDLAAATQVYYGV 225

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             + ++SWN++   ++++ +  +    F + + +G++P+ VTF  +L  C    ++D+  
Sbjct: 226 RQRTIVSWNSIIAAYAQSGHSKEAFQFFQELLANGTKPSSVTFLAILPACSSSQEVDV-- 283

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYCFN 426
               L    G   +  V++ LI  + + G++E +   F  +    ++  W   ++     
Sbjct: 284 -FSALIREAGLESDVLVSTCLITTYGKAGSLENSRRAFAELELSDDVLAWTSAMTSCSQK 342

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
             D D L  F  +   G+     T    +E+C +  + +    IH  ++     S  ++ 
Sbjct: 343 GLDRDSLAIFRQMQLQGIHPTSFTLAVALESCAKLGDYEQGSSIH-RVMALQCKSDEFVA 401

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           ++L+  Y   G L  +    +G +   +    A+++     G    A+  +  +   G+ 
Sbjct: 402 TALVNLYSRCGDLAAARAVFDGFQGSTLVLATALIAGYSRNGDGTAALQAYQLMQLHGDA 461

Query: 547 PDEYILGTILNSCAAIG 563
           P++    TIL++C+  G
Sbjct: 462 PNDVTFVTILSACSHAG 478



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 4/134 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G+ +H  ++ L   +D F+   L+ +YS+CG       VFD      LV  T +++   +
Sbjct: 383 GSSIH-RVMALQCKSDEFVATALVNLYSRCGDLAAARAVFDGFQGSTLVLATALIAGYSR 441

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS-IHCFALKIRIEKNP- 180
           NG+    L+ Y  M+ +G  PN+    +++  C   G  + G       A +  IE    
Sbjct: 442 NGDGTAALQAYQLMQLHGDAPNDVTFVTILSACSHAGLLDEGVGYFQAMAAEHSIEATAQ 501

Query: 181 FVGCSVLNFYAKLG 194
             GC V++  A+LG
Sbjct: 502 HYGC-VVDLLARLG 514


>gi|115446475|ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
 gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza sativa Japonica Group]
 gi|125582364|gb|EAZ23295.1| hypothetical protein OsJ_06992 [Oryza sativa Japonica Group]
 gi|215696993|dbj|BAG90987.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 787

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 182/714 (25%), Positives = 325/714 (45%), Gaps = 32/714 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWG 98
           LR D    + +L       S  +G QVH    K+G+   D+F+ N L+ MY+ C   G  
Sbjct: 100 LRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCA 159

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +VF  +A  + VSWT ++SA  +NG     L ++++M   G   + + +   ++   S+
Sbjct: 160 EKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSL 219

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
           G    GY +HC+ +K     + F+   ++ FY +  ++   ++VF  +++ D+  WN +I
Sbjct: 220 GHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVI 279

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA      EAL     ++++    D+YT  + L   +    FD GR+IHG +IR+ ++
Sbjct: 280 QCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLD 339

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
               +++AL+DMY                     ++W TL       K+         K+
Sbjct: 340 SDKYVMSALMDMY---------------------VNWATL------RKSRSMLPLRMLKY 372

Query: 339 ILS-GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
            LS   + +    +  L+ C   LDL  G  L    L      +  V SSL+ M+ +CG+
Sbjct: 373 YLSVQGKLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGS 432

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +E AH +F          W+ ++SG C N      +  F  +    V+ N  T+  V+  
Sbjct: 433 LEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTA 492

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
           C    +     +IH   I+ G+ +   +  SLI  Y+  GQ + +          ++ SW
Sbjct: 493 CMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQFNQALRLCLSLSNSEI-SW 551

Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
           G +       G +   + +FH +  +G   D      IL+SC            H +++K
Sbjct: 552 GTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLPEGLQAHAYLMK 611

Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
            G ++   +   +ID Y+ CG +  A  AF  +   N    + ++IMA   +G    A+ 
Sbjct: 612 RGLSSTGCMCDYLIDMYSGCGSLTHAFEAFRNTSGRNSS-SWTSIIMASVENGCPETAIR 670

Query: 638 IFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDML 697
           +F +M      P+   F+SV+ AC+  GLV++    F SM   Y +QPS + Y  ++++L
Sbjct: 671 LFVQMLRKEKSPNSLAFLSVLKACAEIGLVNEAFQFFVSMTEVYKIQPSEEHYSHMIEVL 730

Query: 698 SRNGYLEDAKHVIE-IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            R G  ++A+H I+ ++P +   + +  L S  + +GN +    A+++L  L P
Sbjct: 731 GRAGMFKEAEHFIDSVVPSESGASAWSLLCSAAKQNGNAKTMRLAADRLSKLTP 784



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 229/488 (46%), Gaps = 30/488 (6%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDD--VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
           ++  +A+ G +  A + F ++   D  +  W  ++ GYA  G   EAL+++  M+   + 
Sbjct: 42  LMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLR 101

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFK 302
            D + F  AL+ C+      +GRQ+H    +   V   + + N L+ MY     +  A K
Sbjct: 102 PDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEK 161

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           VF  +A  D +SW ++   ++EN    Q   LF + I  G   +  T S+ LR    L  
Sbjct: 162 VFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLGH 221

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           + LG QL C  +  GF+  E + + LI  + RC  +++   VFD ++ K++ +WN ++  
Sbjct: 222 VRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVSWNIVIQC 281

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N CD + L  F ++     E +  T   ++    R        +IHG +I+ G  S 
Sbjct: 282 YADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLIRAGLDSD 341

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
            Y+ S+L+  YVN+  L  S           M     +   L  QG              
Sbjct: 342 KYVMSALMDMYVNWATLRKS---------RSMLPLRMLKYYLSVQG-------------- 378

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
              K D++I+ + L SCA+       + +H  V+K   N + +V S+++D YAKCG ++ 
Sbjct: 379 ---KLDQFIVASSLKSCASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMYAKCGSLEE 435

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A + F ++ +   V  ++ +I     +G    A+ +F  M+L ++QP++ T+ SV++AC 
Sbjct: 436 AHILFSRTKDPCTV-AWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYTSVLTACM 494

Query: 663 HKGLVDKG 670
             G V  G
Sbjct: 495 ALGDVVSG 502



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 142/642 (22%), Positives = 263/642 (40%), Gaps = 52/642 (8%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEM--AERNLVSWTLIVSAAIQNGEFDMGLKMYVD 135
           D   Q  L+  +++ G      + FD M   +R+LV+WT+++S    +G     L + + 
Sbjct: 35  DAAPQLLLMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLR 94

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAKLG 194
           M      P+ F     ++ C + G+   G  +H  A K+  +  + FV   ++  YA   
Sbjct: 95  MVEWPLRPDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCR 154

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +  AE+VF  I++ D   W +M+  Y   G   +AL +   M+  G++ D YT   AL+
Sbjct: 155 SLGCAEKVFSGIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALR 214

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
             S +    +G Q+H  +I+S    S  + N LI+ Y +   +    KVF+ M  KD++S
Sbjct: 215 AASSLGHVRLGYQLHCYMIKSGFVPSEFLENCLIEFYGRCRELQLMQKVFDEMNAKDLVS 274

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           WN +   +++N    +    F   +   +  +  T   +L    +    D G ++    +
Sbjct: 275 WNIVIQCYADNLCDEEALVHFRDLMYKCAECDEYTLGSILHVITRRCAFDYGREIHGYLI 334

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G   ++ V S+L+ M+     +  + S+      K   +    L  +      A  LK
Sbjct: 335 RAGLDSDKYVMSALMDMYVNWATLRKSRSMLPLRMLKYYLSVQGKLDQFIV----ASSLK 390

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
           +                       C S+     G+ +H  ++K   +   ++ SSL+  Y
Sbjct: 391 S-----------------------CASDLDLAAGRMLHACVLKFDVNPDPFVISSLVDMY 427

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G L+ +    +  +     +W A++S     G    A+ +F ++     +P+E+   
Sbjct: 428 AKCGSLEEAHILFSRTKDPCTVAWSAIISGSCLNGQFERAIHLFRTMQLEHVQPNEFTYT 487

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN- 612
           ++L +C A+G       IH   I+ G+ T   V  ++I  Y + G        F+Q+   
Sbjct: 488 SVLTACMALGDVVSGMEIHSNSIRNGYGTSDSVLRSLISFYLREGQ-------FNQALRL 540

Query: 613 ----SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
               SN  I + TL   +A  G     + +F  ++ +       T   ++S+C  K  + 
Sbjct: 541 CLSLSNSEISWGTLFQEFAELGDHLGILNLFHVIQRSGGVLDYPTACLILSSCGKKAHLP 600

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGC----LVDMLSRNGYLEDA 706
           +G          Y M+      GC    L+DM S  G L  A
Sbjct: 601 EGL-----QAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHA 637



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 13/232 (5%)

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLD--MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           L++++   G++  + +  +     D  + +W  +MS     G   EA+ +   +VE   +
Sbjct: 42  LMRAHARAGRMQPARQAFDAMLPRDRSLVAWTVLMSGYATHGPASEALDLLLRMVEWPLR 101

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARM 605
           PD ++    L +CAA G+    + +H    K+G+   +++VA+ ++  YA C  +  A  
Sbjct: 102 PDAFVFSVALRACAAAGSLGVGRQVHAAAAKMGYVGADLFVANGLVTMYASCRSLGCAEK 161

Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
            F     + D + + +++ AY  +G  ++A+ +F +M    +     T    + A S  G
Sbjct: 162 VFS-GIAAPDSVSWTSMLSAYTENGCDTQALMLFLEMIHGGVSCDAYTLSVALRAASSLG 220

Query: 666 LVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
            V  G    C + KS     G  PS     CL++   R   L+  + V + M
Sbjct: 221 HVRLGYQLHCYMIKS-----GFVPSEFLENCLIEFYGRCRELQLMQKVFDEM 267


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 187/655 (28%), Positives = 321/655 (49%), Gaps = 42/655 (6%)

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI--EKNPFVGCSVLNFYAKLGDVAAAER 201
           + FA+   +K   ++  S    +IH  +L+  +     P V  ++L  YA+ GD+ AA  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 202 VFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           +F +   D  D   +N++I           AL+ +  ML +   +  +T ++ L  CS +
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADH-EVSSFTLVSVLLACSHL 165

Query: 260 AD--FDIGRQIHGLIIRS---EVECSISIVNALIDMYIKSSGMDYAFKVF--ERMADKDV 312
           AD    +GR+ H   ++    +        NAL+ MY +   +D A ++F        D+
Sbjct: 166 ADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDL 225

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           ++WNT+     +     +   + +  +  G RP+ VTF+  L  C +L  L +G ++   
Sbjct: 226 VTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAF 285

Query: 373 ALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYC-FNCC 428
            L    L   + V S+L+ M+     V  A  VFD V    + +  WN ++ GY      
Sbjct: 286 VLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGM 345

Query: 429 DADVLKTFCNI-WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
           D + ++ F  +  E+G   +  T   V+  C RSE       +HG ++K   +S  ++ +
Sbjct: 346 DEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQN 405

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-----VE 542
           +L+  Y   G++D +       +  D+ SW  +++  + QG   EA  +   +       
Sbjct: 406 ALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAA 465

Query: 543 AGEK---------------PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA 587
           +GE                P+   L T+L  CA + A  R K IH + ++    +++ V 
Sbjct: 466 SGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVG 525

Query: 588 SAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
           SA++D YAKCG +  AR  FD+     +VI +N LIMAY  HGL  EA+ +FD+M +AN 
Sbjct: 526 SALVDMYAKCGCLALARAVFDR-LPRRNVITWNVLIMAYGMHGLGDEALALFDRM-VANG 583

Query: 648 Q--PSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
           +  P++ TF++ ++ACSH GLVD+G  LF+ M   YG +P+P  + C+VD+L R G L++
Sbjct: 584 EATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDE 643

Query: 706 AKHVIEIM-PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
           A  +I  M P +   + + ++L  CR+H N +LG  A+E+L  L P   + +VLL
Sbjct: 644 AYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLL 698



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 216/496 (43%), Gaps = 34/496 (6%)

Query: 62  LGTQVHGHIVKLGFTN---DIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVSWTLI 116
           LG + H   +K GF +   + F  N L++MY++ G      R+F        +LV+W  +
Sbjct: 172 LGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTM 231

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK-IR 175
           +S  +Q G  +  +++  DM   G  P+     S +  C  +     G  +H F LK   
Sbjct: 232 ISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDD 291

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYA-HCGYGFEALN 232
           +  N FV  ++++ YA    V+ A RVF  +      +G WNAMI GYA H G   EA+ 
Sbjct: 292 LAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIE 351

Query: 233 VVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           + S M  E G    + T    L  C+    F     +HG +++ ++  +  + NAL+DMY
Sbjct: 352 LFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMY 411

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGG------------------FSENKNPGQTAS 333
            +   MD A  +F  +  +D++SWNTL  G                     +   G+T  
Sbjct: 412 ARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETML 471

Query: 334 LFHKFILSGSR--PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYM 391
                 + G R  PN++T   LL  C  L     G ++   A+      +  V S+L+ M
Sbjct: 472 EGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDM 531

Query: 392 FCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCT 450
           + +CG + +A +VFD +  +N+ TWN L+  Y  +    + L  F  +  +G    N  T
Sbjct: 532 YAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVT 591

Query: 451 FFYVVETCCRSE-NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF--SN 507
           F   +  C  S    + +    G     GF    Y+ + ++      G+LD ++    S 
Sbjct: 592 FIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSM 651

Query: 508 GAERLDMASWGAMMSA 523
                 +++W  M+ A
Sbjct: 652 APGEHQVSAWSTMLGA 667



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 192/414 (46%), Gaps = 30/414 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
           +R D +  A +L     L+   +G +VH  ++K      + F+ + L+ MY+        
Sbjct: 256 VRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHA 315

Query: 99  LRVFDEMAE--RNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTN-GFMPNEFAVGSVMKV 154
            RVFD + E  R L  W  ++    Q+G  D   ++++  M+   G  P+E  +  V+  
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA 375

Query: 155 CVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           C          ++H + +K  +  N FV  ++++ YA+LG +  A  +F  I   D+  W
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFE-----GITM---------------DKYTFINALQ 254
           N +I G    G   EA  +V  M        G TM               +  T +  L 
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLP 495

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
           GC+++A    G++IHG  +R  +E  +++ +AL+DMY K   +  A  VF+R+  ++VI+
Sbjct: 496 GCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVIT 555

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSILLRQCGKLLDLDLGLQL-QCL 372
           WN L   +  +    +  +LF + + +G + PN VTF   L  C     +D GL+L Q +
Sbjct: 556 WNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGM 615

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYC 424
               GF     + + ++ +  R G ++ A+ +  +++     ++ W+ +L G C
Sbjct: 616 KRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTML-GAC 668



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 24/286 (8%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG++VK    ++ F+QN L+ MY++ G       +F  +  R++VSW  +++  I  G 
Sbjct: 388 VHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGL 447

Query: 126 FDMGLKMYVDMKTNGF--------------------MPNEFAVGSVMKVCVSMGASEFGY 165
                ++  +M+                        MPN   + +++  C  + A   G 
Sbjct: 448 ISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGK 507

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
            IH +A++  +E +  VG ++++ YAK G +A A  VF  +   +V  WN +I  Y   G
Sbjct: 508 EIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHG 567

Query: 226 YGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSISI 283
            G EAL +   M+  G  T ++ TFI AL  CS     D G ++  G+      E +  +
Sbjct: 568 LGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYL 627

Query: 284 VNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKN 327
              ++D+  ++  +D A+ +   MA  +  V +W+T+ G    ++N
Sbjct: 628 HACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRN 673


>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 655

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 270/518 (52%), Gaps = 9/518 (1%)

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           NAL+  +       G+Q+H  +I+      +S+ N ++ +Y+K    + A K+FE +  +
Sbjct: 65  NALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVR 124

Query: 311 DVISWNTLF----GGFSENKNPGQTA--SLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           +V+SWN +     G   EN++ G     S F + +L    P+H+TF+ L+  C +  D++
Sbjct: 125 NVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIE 184

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           +G+QL C  +  GF  +  V  +L+ ++ +CG VE A  VF +VS +++  WN ++S Y 
Sbjct: 185 MGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYV 244

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS--ENQQMVGQIHGAIIKTGFSSC 482
           FN    +  + F ++    V  +  TF  ++        E      Q+H  +++  F S 
Sbjct: 245 FNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSD 304

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + S+LI  Y     + ++    +     ++ +W  M+    + G  +E + +   ++ 
Sbjct: 305 VLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLR 364

Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
            G  PDE  + +I++SC    A   T  +H F +KL     + VA+++I AY+KCG I  
Sbjct: 365 EGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITS 424

Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           A   F+ + +  D++ + +LI AYA HGL  ++ E+F+KM    ++P +  F+ V+SAC+
Sbjct: 425 AFKCFELT-SQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACA 483

Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
           H GLV KG   FK M + Y + P  + Y CLVD+L R G + +A  ++  MP +      
Sbjct: 484 HCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTL 543

Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            + +  C++H N EL + A+EKL L+ P+    + ++S
Sbjct: 544 GAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMS 581



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 220/425 (51%), Gaps = 14/425 (3%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           +F + +L +S        G Q+H H++K GF   + LQN ++++Y KC       ++F+E
Sbjct: 61  LFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEE 120

Query: 105 MAERNLVSWTLIVSAAI-QNGEFDM-GLKM----YVDMKTNGFMPNEFAVGSVMKVCVSM 158
           +  RN+VSW +++ A++ +N E +  G+++    +  M     +P+      ++ +C   
Sbjct: 121 LPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQF 180

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
              E G  +HCF +K+  + + FVGC+++  YAK G V  A RVF  +S  D+  WN M+
Sbjct: 181 NDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMV 240

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD-----FDIGRQIHGLII 273
             Y       EA  V +SM  + +  D++TF + L   S+++D     +D G+Q+H L++
Sbjct: 241 SCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLL---SVISDDALEYYDFGKQVHSLVL 297

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           R   +  + + +ALI+MY KS  +  A +VF+ M+ ++V++WNT+  GF  + +  +   
Sbjct: 298 RQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMK 357

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           L  + +  G  P+ +T S ++  CG    +   LQ+   A+     D  +V +SLI  + 
Sbjct: 358 LVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYS 417

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG++  A   F+  S  ++ TW  L+  Y F+       + F  +   G++ +   F  
Sbjct: 418 KCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLG 477

Query: 454 VVETC 458
           V+  C
Sbjct: 478 VLSAC 482



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 184/420 (43%), Gaps = 29/420 (6%)

Query: 345 PN--HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
           PN  H+  S  L+   K   L  G QL    +  GF    ++ + ++ ++ +C   E A 
Sbjct: 56  PNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAK 115

Query: 403 SVFDNVSYKNITTWNELLSG--------------YCFNCCDADVLKTFCNIWESGVEVNG 448
            +F+ +  +N+ +WN ++                 CF+     +L+            + 
Sbjct: 116 KLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVP--------DH 167

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
            TF  ++  C +  + +M  Q+H   +K GF    ++  +L+  Y   G ++N+      
Sbjct: 168 ITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCD 227

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN--SCAAIGAYQ 566
               D+  W  M+S  V      EA  +F+S+       DE+   ++L+  S  A+  Y 
Sbjct: 228 VSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYD 287

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             K +H  V++  F+++V VASA+I+ YAK  +I  AR  FD+  +  +V+ +NT+I+ +
Sbjct: 288 FGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDE-MSIRNVVAWNTMIVGF 346

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
            +HG  +E M++  +M      P + T  S++S+C +   + +  L   +   +   Q  
Sbjct: 347 GNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITET-LQVHAFAVKLSCQDF 405

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
                 L+   S+ G +  A    E+   QP    + SL+     HG  E      EK+L
Sbjct: 406 LSVANSLISAYSKCGSITSAFKCFELTS-QPDLVTWTSLIYAYAFHGLAEKSTEMFEKML 464



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 101/196 (51%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVH  +++  F +D+ + + LI MY+K        RVFDEM+ RN+V+W  ++    
Sbjct: 288 FGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFG 347

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +G+ +  +K+  +M   GF+P+E  + S++  C    A      +H FA+K+  +    
Sbjct: 348 NHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLS 407

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  S+++ Y+K G + +A + F   S  D+  W ++I  YA  G   ++  +   ML  G
Sbjct: 408 VANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG 467

Query: 242 ITMDKYTFINALQGCS 257
           I  D+  F+  L  C+
Sbjct: 468 IKPDRIAFLGVLSACA 483



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 122/300 (40%), Gaps = 55/300 (18%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH   VKL   + + + N+LI+ YSKCG      + F+  ++ +LV+WT ++ A   +G
Sbjct: 392 QVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHG 451

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             +   +M+  M + G  P+  A   V+  C   G    G  +H F L            
Sbjct: 452 LAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKG--LHYFKL------------ 497

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            + N Y  + D            S+   C   ++G Y   G   EA  ++ SM    I +
Sbjct: 498 -MTNAYQIVPD------------SEHYTCLVDLLGRY---GLINEAFEILRSM---PIEV 538

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T    +  C L ++ ++ +     +   E E S++    + +++          ++ 
Sbjct: 539 DSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYA-VMSNIFASQKHWYDVERIR 597

Query: 305 ERMADKDVISWNTLFGGFSENKNPG----QTASLFHKFILSG-SRPN----HVTFSILLR 355
           + M DK             + K PG    +  +  H F+ +  S PN    +VT ++LLR
Sbjct: 598 KTMEDK------------RDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVTLNMLLR 645


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/558 (26%), Positives = 276/558 (49%), Gaps = 10/558 (1%)

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            Y + G V  A R F ++   +V  W+AMI  YA  G+  +AL +   M  EG+  +  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKSSGMDYAFKVFERM 307
           F++ L  C+ +    +G+ IH  I+   +     I+ N +++MY K   +D A +VFERM
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             K+ ++WNT+    S +    +  +L  +  L G RPN +T   ++  C  +  +  G 
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +  +    G   +  V ++L+ ++ +CG +  A    + +  ++  +W  LL+ Y  + 
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
                +     +   GV+++  TF  ++E+C       +  +IH  + ++G      + +
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 488 SLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
           +L+  Y   G  D +   F    +  D+  W A+++A V +    E + IF  +   G  
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA------VIDAYAKCGDI 600
           PD     +IL++CA++ A    +  H  +++ G      VASA      VI+ YAKCG +
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSL 420

Query: 601 KGARMAFDQS--FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
             A+  F ++    ++DV+ ++ ++ AY+  GL  EA+  F  M+   ++P   +FVS +
Sbjct: 421 ADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAI 480

Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           + CSH GLV +    F S+   +G+ P+   + CLVD+LSR G++ +A+ ++   P    
Sbjct: 481 AGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAH 540

Query: 719 PTVYRSLLSGCRIHGNKE 736
            + + +LLS CR +G+ E
Sbjct: 541 HSTWMTLLSACRTYGDLE 558



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 201/433 (46%), Gaps = 11/433 (2%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWG 98
           ++ + I     L    +L +  LG  +H  IV  G   +D+ L N ++ MY KCG     
Sbjct: 54  VKANAITFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLA 113

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
             VF+ M  +N V+W  +++A  ++  +     +  +M  +G  PN+  + SV+  C  M
Sbjct: 114 REVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWM 173

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            +   G  +H       +E +  V  +++N Y K G + AA      I + D   W  ++
Sbjct: 174 QSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLL 233

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
             YA  G+G  A+ V+  M  EG+ +D +TF+N L+ C  +A   +G +IH  +  S +E
Sbjct: 234 AAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIE 293

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASLFHK 337
               +  AL+DMY K    D A + F+RM D +DV  WN L   +       +T  +F +
Sbjct: 294 LDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFAR 353

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV------TSSLIYM 391
             L G  P+ VTF  +L  C  L  L LG       L  G  D + V      T+S+I M
Sbjct: 354 MSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINM 413

Query: 392 FCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + +CG++  A + F         ++  W+ +++ Y       + L+ F ++ + GV+ + 
Sbjct: 414 YAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDS 473

Query: 449 CTFFYVVETCCRS 461
            +F   +  C  S
Sbjct: 474 VSFVSAIAGCSHS 486



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 224/487 (45%), Gaps = 11/487 (2%)

Query: 88  MYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA 147
           MY++CG      R FD M  RN+VSW+ +++A  Q G     L+++V M   G   N   
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 148 VGSVMKVCVSMGASEFGYSIH-CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI 206
             SV+  C S+GA   G SIH        +  +  +G +++N Y K G+V  A  VF  +
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 207 SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
            + +   WN MI   +      EA  ++  M  +G+  +K T ++ +  C+ +     GR
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            +H ++    +E   ++ NAL+++Y K   +  A    E +  +D ISW TL   ++ + 
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
           +  +  ++  +    G + +  TF  LL  C  +  L LG ++       G   +  + +
Sbjct: 241 HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQT 300

Query: 387 SLIYMFCRCGAVEMAHSVFDNV-SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           +L+ M+ +CG  + A   FD +   +++T WN LL+ Y       + L  F  +   GV 
Sbjct: 301 ALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVA 360

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF------SSCGYICSSLIKSYVNFGQL 499
            +  TF  +++ C       +    H  +++ G       +S   + +S+I  Y   G L
Sbjct: 361 PDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSL 420

Query: 500 -DNSFEFSNG--AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
            D   EF+    A   D+ +W AM++A    G + EA+  F+S+ + G KPD     + +
Sbjct: 421 ADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAI 480

Query: 557 NSCAAIG 563
             C+  G
Sbjct: 481 AGCSHSG 487


>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 688

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 162/648 (25%), Positives = 319/648 (49%), Gaps = 37/648 (5%)

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           + + ++ C  + A + G SI    +K  I +N F+  +V++ Y     ++ A +VF  ++
Sbjct: 8   IAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMT 67

Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGR 266
             ++  W  M+ GY   G   +A+ +   M+  +    +++ +   L+ C LV D  +G 
Sbjct: 68  ERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGS 127

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
            ++  I +  ++  + ++N+++DM++K+  +  A   F+ +   +  SWNTL  G+ +  
Sbjct: 128 FVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAG 187

Query: 327 NPGQTASLFHK---------------FILSGSRPNHVTFSILLRQCGKLLD--------- 362
              +  SLF++               F+  GS P  + F + +++ G +LD         
Sbjct: 188 MVEEAVSLFNRIPQPNIVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLK 246

Query: 363 -------LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY---KN 412
                  L +G QL    +  G        S+LI M+  CG++  A  VF          
Sbjct: 247 ACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNT 306

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           +  WN +LSG+  N  +   L     +++S +  +  T    ++ C    N ++  Q+H 
Sbjct: 307 VAVWNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHS 366

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            ++ +G+     + S L+  + N G +  + +  +     D+ ++  ++   V  G N  
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A  +F  L++ G   D++I+ +IL  C+++ +    K IH   IK G+ +E   A+A+ D
Sbjct: 427 AFYLFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGD 486

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y KCG+I  + + FD      DV+ +  +I+ +  +G V EA + F KM  + ++P++ 
Sbjct: 487 MYVKCGEIDNSVVLFDGMLE-RDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEV 545

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           TF+ ++SAC H GL+++   + ++M  +YG++P  + Y C+VD+L + G  ++A+ +I+ 
Sbjct: 546 TFLGLLSACRHSGLLEEARSILETMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKK 605

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           MP +P  T++ SLL+ C  H N  L    +EKLL   P++ + +  LS
Sbjct: 606 MPLEPDKTIWMSLLTACGTHKNAGLITVIAEKLLKAFPEDPSLYTSLS 653



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 162/643 (25%), Positives = 285/643 (44%), Gaps = 38/643 (5%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +  HIVK G + ++FL NN+I+MY          +VFDEM ERN+V+WT +VS    
Sbjct: 24  GESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTWTTMVSGYTC 83

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G+    +++Y  M ++     NEF   +V+K C  +G  + G  ++    K  ++ +  
Sbjct: 84  DGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYERIGKENLKGDVV 143

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL---------N 232
           +  SV++ + K G ++ A   F  I   +   WN +I GY   G   EA+         N
Sbjct: 144 LMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVEEAVSLFNRIPQPN 203

Query: 233 VVS---------------------SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
           +VS                      M  EG+ +D +     L+ CS      +G+Q+HG 
Sbjct: 204 IVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHGC 263

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD---KDVISWNTLFGGFSENKNP 328
           +++S +E S   ++ALIDMY     +  A  VF +        V  WN++  GF  N+  
Sbjct: 264 VVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVWNSMLSGFLINEEN 323

Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
                L      S    +  T S  L+ C  L++L LGLQ+  L +  G+  +  V S L
Sbjct: 324 EAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGSIL 383

Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
           + +    G ++ AH +F  +  K+I  ++ L+ G   +  ++     F  + + G++ + 
Sbjct: 384 VDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443

Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
                +++ C    +     QIHG  IK G+ S     ++L   YV  G++DNS    +G
Sbjct: 444 FIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDG 503

Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
               D+ SW  ++      G   EA   FH ++ +  +P+E     +L++C   G  +  
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEA 563

Query: 569 KSIHPFVIKLGFNTEVYVAS--AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
           +SI    +K  +  E Y+     V+D   + G  + A     +     D  ++ +L+ A 
Sbjct: 564 RSILE-TMKCEYGLEPYLEHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTAC 622

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
             H        I +K+ L       + + S+ +A +  G+ D+
Sbjct: 623 GTHKNAGLITVIAEKL-LKAFPEDPSLYTSLSNAYATLGMWDQ 664



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/509 (23%), Positives = 222/509 (43%), Gaps = 21/509 (4%)

Query: 83  NNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM 142
           N LI+ Y K G     + +F+ + + N+VSW  ++S  +  G     L+  V M+  G +
Sbjct: 177 NTLISGYCKAGMVEEAVSLFNRIPQPNIVSWNCLISGFVDKGS-PRALEFLVRMQREGLV 235

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
            + FA+   +K C   G    G  +H   +K  +E +PF   ++++ Y+  G ++ A  V
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADV 295

Query: 203 FYSISS---DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
           F+       + V  WN+M+ G+        AL ++  +    +  D YT   AL+ C  +
Sbjct: 296 FHQEKPALCNTVAVWNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINL 355

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
            +  +G Q+H L++ S  E    + + L+D++     +  A K+F R+ +KD+I+++ L 
Sbjct: 356 VNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLI 415

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G  ++        LF + I  G   +    S +L+ C  L  L  G Q+  L +  G+ 
Sbjct: 416 RGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQ 475

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            E    ++L  M+ +CG ++ +  +FD +  +++ +W  ++ G+  N    +  + F  +
Sbjct: 476 SEPVTATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFQYFHKM 535

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             S +E N  TF  ++  C  S      G +  A        C Y     ++ Y     L
Sbjct: 536 INSEIEPNEVTFLGLLSACRHS------GLLEEARSILETMKCEYGLEPYLEHYYCVVDL 589

Query: 500 DNSFEFSNGAERL--------DMASWGAMMSALVHQGHNHEAVTIFHSLVEA-GEKPDEY 550
                    AE L        D   W ++++A     +      I   L++A  E P  Y
Sbjct: 590 LGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEKLLKAFPEDPSLY 649

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
              ++ N+ A +G + +   +     KLG
Sbjct: 650 T--SLSNAYATLGMWDQLSEVREAAKKLG 676



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 217/501 (43%), Gaps = 40/501 (7%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           + MD       L+ C  +  F  G  I   I++  +  ++ + N +I MY+    +  A 
Sbjct: 1   MAMDLKLIAAGLRHCGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAH 60

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKL 360
           KVF+ M ++++++W T+  G++ +  P +   L+ + + S     N   +S +L+ CG +
Sbjct: 61  KVFDEMTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLV 120

Query: 361 LDLDLG-----------LQLQCLALHC--------GFLDEENVT------------SSLI 389
            D+ LG           L+   + ++         G L E N +            ++LI
Sbjct: 121 GDIQLGSFVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLI 180

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
             +C+ G VE A S+F+ +   NI +WN L+SG+  +      L+    +   G+ ++G 
Sbjct: 181 SGYCKAGMVEEAVSLFNRIPQPNIVSWNCLISGF-VDKGSPRALEFLVRMQREGLVLDGF 239

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS---FEFS 506
                ++ C       M  Q+HG ++K+G  S  +  S+LI  Y N G L ++   F   
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQE 299

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
             A    +A W +M+S  +    N  A+ +   L ++    D Y L   L  C  +   +
Sbjct: 300 KPALCNTVAVWNSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLR 359

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
               +H  V+  G+  +  V S ++D +A  G+I+ A   F +  N  D+I ++ LI   
Sbjct: 360 LGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPN-KDIIAFSGLIRGC 418

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC-LLFKSMDSQYGMQP 685
              G  S A  +F ++    L   Q    S++  CS   L   GC      +  + G Q 
Sbjct: 419 VKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCS--SLASLGCGKQIHGLCIKKGYQS 476

Query: 686 SPDCYGCLVDMLSRNGYLEDA 706
            P     L DM  + G ++++
Sbjct: 477 EPVTATALGDMYVKCGEIDNS 497



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 202/458 (44%), Gaps = 43/458 (9%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVS-WTLIV 117
            +G Q+HG +VK G  +  F  + LI MYS CG       VF  ++ A  N V+ W  ++
Sbjct: 255 TMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVWNSML 314

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           S  + N E +  L + + +  +    + + +   +K+C+++     G  +H   +    E
Sbjct: 315 SGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVVSGYE 374

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  VG  +++ +A +G++  A ++F+ + + D+  ++ +I G    G+   A  +   +
Sbjct: 375 LDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           +  G+  D++   + L+ CS +A    G+QIHGL I+   +       AL DMY+K   +
Sbjct: 435 IKLGLDADQFIVSSILKVCSSLASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEI 494

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D +  +F+ M ++DV+SW  +  GF +N    +    FHK I S   PN VTF  LL  C
Sbjct: 495 DNSVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSAC 554

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNIT 414
                            H G L+E    S L  M C  G    +E  + V D        
Sbjct: 555 ----------------RHSGLLEE--ARSILETMKCEYGLEPYLEHYYCVVD-------- 588

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
                L G      +A+ L     I +  +E +   +  ++  C   +N  ++  I   +
Sbjct: 589 -----LLGQAGRFQEAEEL-----IKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEKL 638

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
           +K  F     + +SL  +Y   G  D   E    A++L
Sbjct: 639 LKA-FPEDPSLYTSLSNAYATLGMWDQLSEVREAAKKL 675



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/299 (20%), Positives = 133/299 (44%), Gaps = 2/299 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L+ +L +  NL +  LG QVH  +V  G+  D  + + L+ +++  G      ++F
Sbjct: 341 DSYTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLF 400

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             +  +++++++ ++   +++G   +   ++ ++   G   ++F V S++KVC S+ +  
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLASLG 460

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH   +K   +  P    ++ + Y K G++  +  +F  +   DV  W  +I G+ 
Sbjct: 461 CGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGIIVGFG 520

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI-HGLIIRSEVECSI 281
             G   EA      M+   I  ++ TF+  L  C      +  R I   +     +E  +
Sbjct: 521 QNGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSILETMKCEYGLEPYL 580

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
                ++D+  ++     A ++ ++M  + D   W +L      +KN G    +  K +
Sbjct: 581 EHYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEKLL 639


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 176/645 (27%), Positives = 309/645 (47%), Gaps = 86/645 (13%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           KN     S+++ +AK G ++ A ++F  +   ++  WN+MI  Y H     EA  +   M
Sbjct: 44  KNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKM 103

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
                T D Y++   +   +   +    R +  L+     + +    NA++  Y K+   
Sbjct: 104 ----PTRDLYSWTLMITCYTRNGELAKARNLFNLL---PYKWNPVCCNAMVAGYAKNRQF 156

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           D A ++F+ M  KD++SWN++  G++ N        L  +F    +  + V++++++   
Sbjct: 157 DEARRLFDAMPAKDLVSWNSMLTGYTRNGE----MRLGLQFFEEMAERDVVSWNLMVDGF 212

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENV-TSSLIYMFC---RCGAVEMAHSVFDNVSYKNI 413
            ++ DL+   +         F    N  T S + M C   R G +  A  +FD +  +N+
Sbjct: 213 VEVGDLNSSWEF--------FEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNV 264

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQ 469
             WN +++ Y  NC   + +  F  +     E N  ++  V+    R     E +Q++ Q
Sbjct: 265 VAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYVRMGKLDEARQLLNQ 320

Query: 470 I-------HGAIIK------------------------------TGFSSCGYI------- 485
           +         A+I                                G+S CG +       
Sbjct: 321 MPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLF 380

Query: 486 ----------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
                      ++++ SY   GQ+D + +     +  ++ SW +++S L   G   +A+ 
Sbjct: 381 KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALK 440

Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
            F  +   G+KPD+      L+SCA + A Q  K +H  V+K G+ T+++V++A+I  YA
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYA 500

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG I  A + F +  +  DV+ +N+LI AYA +G   EA+++F KM++  + P + TFV
Sbjct: 501 KCGSISSAELLF-KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFV 559

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
            ++SACSH GL+D+G  LFK M   Y ++P  + Y C+VD+L R G LE+A  ++  M  
Sbjct: 560 GILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKI 619

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +  ++ +LL  CRIHGN EL ++A+EKLL   P   + +VLLS
Sbjct: 620 NANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLS 664



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 138/579 (23%), Positives = 231/579 (39%), Gaps = 138/579 (23%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D+   N+++  Y++ G    GL+ F+EMAER++VSW L+V   ++ G+ +   + +    
Sbjct: 170 DLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEK-- 227

Query: 138 TNGFMPNEFAVGSVMKVC-----------------------VSMGASEFGYSIHC----- 169
               +PN   V  V  +C                       V+  A    Y  +C     
Sbjct: 228 ----IPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEA 283

Query: 170 FALKIRI-EKNPFVGCSVLNFYAKLG---------------DVAA--------------- 198
            +L + + EKN     +V+N Y ++G               +VAA               
Sbjct: 284 ISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMD 343

Query: 199 -AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A ++F  IS  DV CWN MI GY+ CG   EAL++   M                    
Sbjct: 344 DARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQM-------------------- 383

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
                              V+  I   N ++  Y +   MD A K+FE M +K+++SWN+
Sbjct: 384 -------------------VKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNS 424

Query: 318 LFGGFSENKNPGQTASLFHKFIL---SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           L  G ++N   G        F+L    G +P+  TF+  L  C  L  L +G QL  L +
Sbjct: 425 LISGLTQN---GSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVM 481

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G+  +  V+++LI M+ +CG++  A  +F ++ + ++ +WN L++ Y  N    + LK
Sbjct: 482 KSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALK 541

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS--SC---GYICSSL 489
            F  +   GV  +  TF  ++  C            H  +I  G     C    Y    L
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACS-----------HVGLIDQGLKLFKCMVQAYNIEPL 590

Query: 490 IKSYV-------NFGQLDNSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
            + Y          G+L+ +F+   G +   +   WGA++ A    G+   A      L+
Sbjct: 591 AEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLL 650

Query: 542 E-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           E    K   Y+L  + N  A  G +     +   + + G
Sbjct: 651 EFEPHKTSNYVL--LSNMQAEAGRWDEVARVRRLMKEKG 687



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 162/741 (21%), Positives = 325/741 (43%), Gaps = 99/741 (13%)

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF 141
            N++I+ ++K G      ++FD M +RN+VSW  +++A + N   +   +++  M T   
Sbjct: 49  HNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPT--- 105

Query: 142 MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER 201
              +    ++M  C +    E   + + F L +  + NP    +++  YAK      A R
Sbjct: 106 --RDLYSWTLMITCYTRNG-ELAKARNLFNL-LPYKWNPVCCNAMVAGYAKNRQFDEARR 161

Query: 202 VFYSISSDDVGCWNAMIGGYAHCGYG------FEAL---NVVS-SMLFEGIT-------- 243
           +F ++ + D+  WN+M+ GY   G        FE +   +VVS +++ +G          
Sbjct: 162 LFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSS 221

Query: 244 ---MDKYTFINALQGCSLVADF-------DIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
               +K    N +   +++  F       +  R    + IR+ V       NA+I  Y++
Sbjct: 222 WEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAW-----NAMIAAYVQ 276

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF----------ILSGS 343
           +  +D A  +F  M +K+ ISW T+  G+       +   L ++           ++SG 
Sbjct: 277 NCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGY 336

Query: 344 RPN-------HVTFSILLR-------------QCGKLLDLDLGLQLQCLALHCGFLDEEN 383
             N        +   I +R             QCG++ +         L L    + ++ 
Sbjct: 337 VQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDE--------ALHLFKQMVKKDI 388

Query: 384 VT-SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
           V+ ++++  + + G ++ A  +F+ +  KNI +WN L+SG   N    D LK+F  +   
Sbjct: 389 VSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHE 448

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
           G + +  TF   + +C      Q+  Q+H  ++K+G+++  ++ ++LI  Y   G + ++
Sbjct: 449 GQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSA 508

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
                  +  D+ SW ++++A    G+  EA+ +FH +   G  PDE     IL++C+ +
Sbjct: 509 ELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHV 568

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVY 619
           G   +   +   +++  +N E      + ++D   + G ++ A ++      N+N  I +
Sbjct: 569 GLIDQGLKLFKCMVQ-AYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGI-W 626

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMD 678
             L+ A   HG +  A   F   KL   +P + + +V + +  +  G  D+   + + M 
Sbjct: 627 GALLGACRIHGNLELAK--FAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMK 684

Query: 679 SQYGMQPSPDCYGCLVDMLSR-NGYL-EDAKH--VIEIMPFQPSPTVYRSLLSGC----R 730
            + G +  P      +++ +R + +L ED  H   +E+     S T +    + C    R
Sbjct: 685 EK-GAEKQPGW--SWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTAKCPPYLR 741

Query: 731 IHGNKE-LGEWASEKLLLLLP 750
             G++E L EW    LL   P
Sbjct: 742 KTGSEELLAEWKHMLLLTNFP 762



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 2/255 (0%)

Query: 69  HIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDM 128
           H+ K     DI   N ++A Y++ G     +++F+EM E+N+VSW  ++S   QNG +  
Sbjct: 378 HLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLD 437

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            LK ++ M   G  P++      +  C  + A + G  +H   +K     + FV  +++ 
Sbjct: 438 ALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALIT 497

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYT 248
            YAK G +++AE +F  I   DV  WN++I  YA  G G EAL +   M  EG+  D+ T
Sbjct: 498 MYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVT 557

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           F+  L  CS V   D G ++   ++++  +E        ++D+  ++  ++ AF++   M
Sbjct: 558 FVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGM 617

Query: 308 A-DKDVISWNTLFGG 321
             + +   W  L G 
Sbjct: 618 KINANAGIWGALLGA 632



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 2/182 (1%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D    A  LS   +L +  +G Q+H  ++K G+  D+F+ N LI MY+KCG       
Sbjct: 451 KPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAEL 510

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F ++   ++VSW  +++A   NG     LK++  M+  G  P+E     ++  C  +G 
Sbjct: 511 LFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGL 570

Query: 161 SEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMI 218
            + G  +  C      IE        +++   + G +  A ++   +  + + G W A++
Sbjct: 571 IDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALL 630

Query: 219 GG 220
           G 
Sbjct: 631 GA 632



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 18/165 (10%)

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I    K G I  A   F Q     + + +N++I A+A +G +S+A ++FD M   N+   
Sbjct: 22  ITQLGKSGQIDEAIKVF-QHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI--- 77

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG--CLVDMLSRNGYLEDAKH 708
             ++ S+++A  H   V++   LF  M       P+ D Y    ++   +RNG L  A++
Sbjct: 78  -VSWNSMIAAYLHNDRVEEARQLFDKM-------PTRDLYSWTLMITCYTRNGELAKARN 129

Query: 709 VIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND 753
           +  ++P++ +P    ++++G     N++  E  + +L   +P  D
Sbjct: 130 LFNLLPYKWNPVCCNAMVAG--YAKNRQFDE--ARRLFDAMPAKD 170


>gi|302809930|ref|XP_002986657.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
 gi|300145545|gb|EFJ12220.1| hypothetical protein SELMODRAFT_124576 [Selaginella moellendorffii]
          Length = 662

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 306/627 (48%), Gaps = 14/627 (2%)

Query: 142 MPNEFAVGSVMKVCVSMGAS-EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
           +P    + ++M+ C S          IH   +   ++++  +G  ++  Y K G +A A 
Sbjct: 29  LPPRSLLANLMRECSSTTRDLATARMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADAR 88

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
           RV  ++ +     W A+I  Y H G   +A+ +   +L EG+  D  +F+  L   +L  
Sbjct: 89  RVLDAMPARGKLAWTAIISAYVHSGDFHQAIYLFHCLLLEGVIPDAVSFVAMLGALALDE 148

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
             ++   +HG I+ S +E  + + NAL+ MY K   +   +KVFERM +++V+SW  +  
Sbjct: 149 SQELATCVHGWIVESGLEQELIVANALMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIA 208

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
            ++      +   LF    L G RPN +TFS  L       DL     +    +  GF  
Sbjct: 209 SYARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGA 268

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V ++ + M  RCG +  A  VF +++ ++  +WN +++          V   F  + 
Sbjct: 269 VTVVANACVGMLARCGDLAAAARVFHSMAERDEISWNVMINAAAEEGEAPRVASLFMEMM 328

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII----KTGFSSCGYICSSLIKSYVNF 496
             G   +  TF  ++ +  ++     V   +  ++    ++G+ S   + ++L+  Y   
Sbjct: 329 AEGRRPDRATFLSILSSMEKNLVDPPVPPFYQLVLNCIAESGYQSSLQVTNALVSFYGKC 388

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           G ++ +          D+ S  A+++A   +    +A+ +F  L+ +G + ++     +L
Sbjct: 389 GDVEGARRVFRSISSPDVISCTALIAAFSQRAQFQDALVVFRRLLHSGVRANQVTFLELL 448

Query: 557 NSCAAI--GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           +SC ++  G +     IH  ++  GF +EV VA+A+++ Y+ CG++K A+ A++ +    
Sbjct: 449 SSCRSLSDGLW-----IHSQIVASGFQSEVDVAAALVEMYSGCGNLKQAKRAYN-AVAVK 502

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQATFVSVMSACSHKGLVDKGCLL 673
           ++++ N  I A A +G    A+++F +M+     +P   T  +V+SAC+H GLV +GC  
Sbjct: 503 NLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGITLNAVLSACAHGGLVSQGCQY 562

Query: 674 FKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           F  M   Y +  +   Y CL+D+L R G L+ A+ V   MPF P  +V  + L  CR H 
Sbjct: 563 FAGMKCDYQLTCNSQHYSCLIDLLGRAGRLDIAEKVTTSMPFPPDQSVRMAFLGACRTHH 622

Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
           +KE G  A+ ++L L P + +A+V LS
Sbjct: 623 DKERGSEAARRVLQLDPFDHSAYVALS 649



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 254/549 (46%), Gaps = 22/549 (4%)

Query: 30  GNNQFCSDSFLRKD----PIFLAKSLSLSENL------KSRVLGT--QVHGHIVKLGFTN 77
           GN  F   +F   D    P  +    SL  NL       +R L T   +H  IV  G   
Sbjct: 7   GNTHFLFKAFFSSDSLPSPPKVLPPRSLLANLMRECSSTTRDLATARMIHSRIVSSGLDR 66

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D  L N L+ MY KCG      RV D M  R  ++WT I+SA + +G+F   + ++  + 
Sbjct: 67  DHHLGNQLVQMYLKCGSLADARRVLDAMPARGKLAWTAIISAYVHSGDFHQAIYLFHCLL 126

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
             G +P+  +  +++       + E    +H + ++  +E+   V  ++++ Y+K  D+ 
Sbjct: 127 LEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANALMSMYSKRLDLR 186

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
           +  +VF  +   +V  W  MI  YA  G   EA+ +  SM  EG+  ++ TF + L   S
Sbjct: 187 SCWKVFERMPERNVVSWTVMIASYARLGELAEAMRLFRSMQLEGVRPNEITFSSTLVLFS 246

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
              D    + IH  I+ S       + NA + M  +   +  A +VF  MA++D ISWN 
Sbjct: 247 GSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFHSMAERDEISWNV 306

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-SILLRQCGKLLDLDLG----LQLQCL 372
           +    +E     + ASLF + +  G RP+  TF SIL      L+D  +     L L C+
Sbjct: 307 MINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNLVDPPVPPFYQLVLNCI 366

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A   G+     VT++L+  + +CG VE A  VF ++S  ++ +   L++ +       D 
Sbjct: 367 A-ESGYQSSLQVTNALVSFYGKCGDVEGARRVFRSISSPDVISCTALIAAFSQRAQFQDA 425

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L  F  +  SGV  N  TF  ++ + CRS +  +   IH  I+ +GF S   + ++L++ 
Sbjct: 426 LVVFRRLLHSGVRANQVTFLELLSS-CRSLSDGL--WIHSQIVASGFQSEVDVAAALVEM 482

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYI 551
           Y   G L  +    N     ++      ++A    G++  A+ +F  + +  G KPD   
Sbjct: 483 YSGCGNLKQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEMQQDGGFKPDGIT 542

Query: 552 LGTILNSCA 560
           L  +L++CA
Sbjct: 543 LNAVLSACA 551


>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 272/513 (53%), Gaps = 3/513 (0%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +++ LQ C L +D   G  IH   ++  +  S+   N +++ Y+K   + Y  ++F+ M 
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGL 367
           +++V+SW+ +  GF ++  P +  SLF +    G+  PN  T    L  C     L    
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           Q+    +  G+     + ++ +    R   +  A  VF++   K+  +WN +++GY    
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGY-LQL 396

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              ++ K +  +    V+ +  TF  ++         ++  Q+HG ++K+G+ +   + +
Sbjct: 397 AYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL   YV   +L + F+  +     D+ SW  M +  +  G   +A+ + + +   G + 
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRL 516

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +++ L T LNSCA + + +  K  H   IKLG + +V V +A++D YAKCG +  A + F
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +S +   V+ + T+IM +AH+G   EA++IFD+M+    +P+  TF+ V++ACS  G +
Sbjct: 577 -RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFI 635

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D+    F SM + +G+ PS D Y C+V++L R G +++A+ +I  MPFQP   V+++LL 
Sbjct: 636 DEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLG 695

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C +HG+ E G+ A+E  L L   + + ++LLS
Sbjct: 696 ACLVHGDIETGKRAAEHALNLDRNDPSTYILLS 728



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 2/399 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G+ +H   +K      +F  N+++  Y KCG   +GL++FDEM ERN+VSW+ I++  +Q
Sbjct: 234 GSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQ 293

Query: 123 NGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G  +  L ++  M  +G  MPNEF + S +  C         Y I+ F +++    N F
Sbjct: 294 HGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVF 353

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  + L    +   +  A  VF S  S D   WNAM+ GY    Y FE       M  E 
Sbjct: 354 LMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAY-FELPKFWRRMNLES 412

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D +TF + L G + +++F +G Q+HG +++S     I + N+L DMY+K+  +   F
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F+ M+  DV SW  +  G  +   P +   + ++    G R N  T +  L  C  L 
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRLNKFTLATALNSCANLA 532

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            ++ G +   L +  G   +  V ++L+ M+ +CG +  A+ VF ++  +++ +W  ++ 
Sbjct: 533 SIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIM 592

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           G+  N    + L+ F  + +   E N  TF  V+  C +
Sbjct: 593 GFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQ 631



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 197/435 (45%), Gaps = 4/435 (0%)

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           K +V    N  +  E    S ++ CV    S  G +IH   LK  +  + F    VLNFY
Sbjct: 201 KSFVSKSENSSVKLEDFYVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFY 260

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTF 249
            K G ++   ++F  +   +V  W+A+I G+   G   EAL++   M  +G  M +++T 
Sbjct: 261 VKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTL 320

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++AL  CSL        QI+  I+R     ++ ++NA +   I+   +  A +VFE    
Sbjct: 321 VSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLS 380

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           KD +SWN +  G+ +     +    + +  L   +P++ TF+ +L     L +  LGLQ+
Sbjct: 381 KDTVSWNAMMAGYLQLAY-FELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQV 439

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
               +  G+ ++  V +SL  M+ +   +      FD +S  ++ +W ++ +G C  C +
Sbjct: 440 HGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAG-CLQCGE 498

Query: 430 A-DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               LK    +   GV +N  T    + +C    + +   + HG  IK G      + ++
Sbjct: 499 PMKALKVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNA 558

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G + ++       +   + SW  M+    H G   EA+ IF  + +   +P+
Sbjct: 559 LLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPN 618

Query: 549 EYILGTILNSCAAIG 563
                 +LN+C+  G
Sbjct: 619 HITFICVLNACSQGG 633



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 168/363 (46%), Gaps = 4/363 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q++  IV+LG+ +++FL N  +    +       L VF+    ++ VSW  +++  +Q  
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F++  K +  M      P+ F   S++    ++     G  +H   +K     +  VG 
Sbjct: 398 YFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+ + Y K   +    + F  +SS DV  W  M  G   CG   +AL V+  M   G+ +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKNVGVRL 516

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +K+T   AL  C+ +A  + G++ HGL I+   +  + + NAL+DMY K   M  A  VF
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M ++ V+SW T+  GF+ N    +   +F +     + PNH+TF  +L  C +   +D
Sbjct: 577 RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFID 636

Query: 365 LGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
              +    ++   G    E+    ++ +  R G ++ A  +   + ++  +  W  LL G
Sbjct: 637 EAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL-G 695

Query: 423 YCF 425
            C 
Sbjct: 696 ACL 698


>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 272/513 (53%), Gaps = 3/513 (0%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +++ LQ C L +D   G  IH   ++  +  S+   N +++ Y+K   + Y  ++F+ M 
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGL 367
           +++V+SW+ +  GF ++  P +  SLF +    G+  PN  T    L  C     L    
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSY 337

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
           Q+    +  G+     + ++ +    R   +  A  VF++   K+  +WN +++GY    
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGY-LQL 396

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              ++ K +  +    V+ +  TF  ++         ++  Q+HG ++K+G+ +   + +
Sbjct: 397 AYFELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           SL   YV   +L + F+  +     D+ SW  M +  +  G   +A+ + + +   G + 
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRL 516

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
           +++ L T LNSCA + + +  K  H   IKLG + +V V +A++D YAKCG +  A + F
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576

Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            +S +   V+ + T+IM +AH+G   EA++IFD+M+    +P+  TF+ V++ACS  G +
Sbjct: 577 -RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFI 635

Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
           D+    F SM + +G+ PS D Y C+V++L R G +++A+ +I  MPFQP   V+++LL 
Sbjct: 636 DEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLLG 695

Query: 728 GCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            C +HG+ E G+ A+E  L L   + + ++LLS
Sbjct: 696 ACLVHGDIETGKRAAEHALNLDRNDPSTYILLS 728



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 198/399 (49%), Gaps = 2/399 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G+ +H   +K      +F  N+++  Y KCG   +GL++FDEM ERN+VSW+ I++  +Q
Sbjct: 234 GSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQ 293

Query: 123 NGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +G  +  L ++  M  +G  MPNEF + S +  C         Y I+ F +++    N F
Sbjct: 294 HGRPNEALSLFGRMHCDGTIMPNEFTLVSALHACSLTQRLICSYQIYAFIVRLGYGSNVF 353

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  + L    +   +  A  VF S  S D   WNAM+ GY    Y FE       M  E 
Sbjct: 354 LMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLAY-FELPKFWRRMNLES 412

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D +TF + L G + +++F +G Q+HG +++S     I + N+L DMY+K+  +   F
Sbjct: 413 VKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGF 472

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F+ M+  DV SW  +  G  +   P +   + ++    G R N  T +  L  C  L 
Sbjct: 473 KAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRLNKFTLATALNSCANLA 532

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            ++ G +   L +  G   +  V ++L+ M+ +CG +  A+ VF ++  +++ +W  ++ 
Sbjct: 533 SIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIM 592

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           G+  N    + L+ F  + +   E N  TF  V+  C +
Sbjct: 593 GFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQ 631



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 197/435 (45%), Gaps = 4/435 (0%)

Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
           K +V    N  +  E    S ++ CV    S  G +IH   LK  +  + F    VLNFY
Sbjct: 201 KSFVSKSENSSVKLEDFYVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFY 260

Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM-DKYTF 249
            K G ++   ++F  +   +V  W+A+I G+   G   EAL++   M  +G  M +++T 
Sbjct: 261 VKCGRLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTL 320

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++AL  CSL        QI+  I+R     ++ ++NA +   I+   +  A +VFE    
Sbjct: 321 VSALHACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLS 380

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           KD +SWN +  G+ +     +    + +  L   +P++ TF+ +L     L +  LGLQ+
Sbjct: 381 KDTVSWNAMMAGYLQLAY-FELPKFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQV 439

Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
               +  G+ ++  V +SL  M+ +   +      FD +S  ++ +W ++ +G C  C +
Sbjct: 440 HGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAG-CLQCGE 498

Query: 430 A-DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
               L+    +   GV +N  T    + +C    + +   + HG  IK G      + ++
Sbjct: 499 PMKALEVIYEMKNVGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNA 558

Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
           L+  Y   G + ++       +   + SW  M+    H G   EA+ IF  + +   +P+
Sbjct: 559 LLDMYAKCGCMTSANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPN 618

Query: 549 EYILGTILNSCAAIG 563
                 +LN+C+  G
Sbjct: 619 HITFICVLNACSQGG 633



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 168/363 (46%), Gaps = 4/363 (1%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q++  IV+LG+ +++FL N  +    +       L VF+    ++ VSW  +++  +Q  
Sbjct: 338 QIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTVSWNAMMAGYLQLA 397

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
            F++  K +  M      P+ F   S++    ++     G  +H   +K     +  VG 
Sbjct: 398 YFELP-KFWRRMNLESVKPDNFTFASILTGLAALSEFRLGLQVHGQLVKSGYGNDICVGN 456

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+ + Y K   +    + F  +SS DV  W  M  G   CG   +AL V+  M   G+ +
Sbjct: 457 SLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKNVGVRL 516

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +K+T   AL  C+ +A  + G++ HGL I+   +  + + NAL+DMY K   M  A  VF
Sbjct: 517 NKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTSANVVF 576

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             M ++ V+SW T+  GF+ N    +   +F +     + PNH+TF  +L  C +   +D
Sbjct: 577 RSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAEPNHITFICVLNACSQGGFID 636

Query: 365 LGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT-TWNELLSG 422
              +    ++   G    E+    ++ +  R G ++ A  +   + ++  +  W  LL G
Sbjct: 637 EAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAEDLILQMPFQPGSLVWQTLL-G 695

Query: 423 YCF 425
            C 
Sbjct: 696 ACL 698


>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
          Length = 767

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 186/700 (26%), Positives = 324/700 (46%), Gaps = 43/700 (6%)

Query: 63  GTQVHGHIVKLGFTN-DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           G  VHG +     +  D+ L   L+  Y++ G      +VFD M  R++VSWT +VS   
Sbjct: 76  GKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYA 135

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           +NG     L+++  M+ +G  PN+F  GS    C   G +  G  +H  A K R   + F
Sbjct: 136 RNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMF 195

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ + + G V  A ++F  +   DV C                    +SS  F  
Sbjct: 196 VQSALMDMHLRCGSVEDARQLFAEMGKKDVCC--------------------ISSWQFPE 235

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
                   I +  G   V  F        L +R +    +  V+A      + S      
Sbjct: 236 RQ------IRSTAGSPPVTAFP-----PDLHLRHQARHLLGAVSAKSPPPARCS------ 278

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
                   + ++SW  +  G++ N  P +   LF     SG+RPN  T+      C    
Sbjct: 279 ---MECPHRSLVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAG 335

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
               G Q+   A    F  +  V S+L+ M  RCG+VE A  +F  +  K++ +WN L+ 
Sbjct: 336 CARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIR 395

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           G+     D D L  F ++ +  +  +  T    ++ C        V  IH  IIK G+  
Sbjct: 396 GFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWD 455

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA-LVHQGHNHEAVTIFHSL 540
              +  SLI SY     + ++    +     D+ S  A++S   + + ++ +A+ +F  +
Sbjct: 456 EKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKI 515

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G   D  +L ++L  CA++ + +    IH ++ K     ++ + +A++D YAK G+ 
Sbjct: 516 HRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEF 575

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
             A+ AFD+    N VI + +LI A   +G   +A+ +F++M    ++P+  TF+S++SA
Sbjct: 576 SDAKRAFDEMPYRN-VISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSA 634

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
           C H GL +KG   F SM S+YG+ P  + Y   +D+L+R G LEDA  +++    +P+ +
Sbjct: 635 CGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSS 694

Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +  ++L  C++HGN  LGE A++ L  + P +   + +L+
Sbjct: 695 MLGAMLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLA 734



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 215/474 (45%), Gaps = 7/474 (1%)

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
           E   R+LVSWT +VS   +NG     L+++  M+ +G  PN+F  GS    C   G +  
Sbjct: 280 ECPHRSLVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARS 339

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  A K R   + FV  ++++ + + G V  A ++F  +   DV  WNA+I G+  
Sbjct: 340 GEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVE 399

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
            G+  +AL + SSML E +  D YT  +AL+ C +V        IH  II+        +
Sbjct: 400 RGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVV 459

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSG 342
           + +LI+ Y K   M  A  +++ +++ D++S   L  G++ ++N  + A  LF K    G
Sbjct: 460 IGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKG 519

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
              + V  S +L  C  +     G Q+         + +  + ++L+ M+ + G    A 
Sbjct: 520 LWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAK 579

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC--CR 460
             FD + Y+N+ +W  L++    N    D +  F  + E GV  N  TF  ++  C  C 
Sbjct: 580 RAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCG 639

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGA 519
             N+ M       + + G        SS I      GQL+++++       + + +  GA
Sbjct: 640 LTNKGM-EYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGA 698

Query: 520 MMSALVHQGHNHEAVTIFHSL--VEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
           M+ A    G+     T   +L  ++ G   +  +L  +   C+     QRT+ +
Sbjct: 699 MLGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREV 752



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 166/407 (40%), Gaps = 42/407 (10%)

Query: 262 FDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           F  G+ +HG +   S     + +   L+  Y +   +  A KVF+ M  + V+SW  +  
Sbjct: 73  FRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVS 132

Query: 321 GFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
           G++ N  P +   LF     SG+RPN  T+      C        G Q+   A    F  
Sbjct: 133 GYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAG 192

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
           +  V S+L+ M  RCG+VE A  +F  +  K++             CC +        I 
Sbjct: 193 DMFVQSALMDMHLRCGSVEDARQLFAEMGKKDV-------------CCISSWQFPERQIR 239

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
            +        F    +   R + + ++G +         + C   C    +S V++  + 
Sbjct: 240 STAGSPPVTAF--PPDLHLRHQARHLLGAVSAKSPPP--ARCSMECPH--RSLVSWTAMV 293

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           + +   NG  R                    EA+ +F  +  +G +P+++  G+  ++CA
Sbjct: 294 SGYA-RNGRPR--------------------EALELFALMRASGARPNQFTYGSAASACA 332

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
             G  +  + +H    K  F  +++V SA++D + +CG ++ AR  F +     DV+ +N
Sbjct: 333 GAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAE-MGKKDVVSWN 391

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
            LI  +   G   +A+ +F  M    + P   T  S + AC   G+ 
Sbjct: 392 ALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVA 438



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 65/122 (53%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + L+  L L  ++ S   GTQ+H ++ K     DI L N L+ MY+K G F    R F
Sbjct: 523 DGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAF 582

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           DEM  RN++SWT +++A  +NG  +  + ++  M  +G  PN+    S++  C   G + 
Sbjct: 583 DEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTN 642

Query: 163 FG 164
            G
Sbjct: 643 KG 644



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 1/167 (0%)

Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNS 502
           VE+N   F +++  C  S   +    +HG +     S    ++ + L+  Y  FG +  +
Sbjct: 53  VELNLNIFRFLLLCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAA 112

Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
            +  +G     + SW AM+S     G   EA+ +F  +  +G +P+++  G+  ++CA  
Sbjct: 113 RKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGA 172

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
           G  +  + +H    K  F  +++V SA++D + +CG ++ AR  F +
Sbjct: 173 GCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAE 219



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 37/197 (18%)

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVI 591
           A   +  LVE       ++L   ++SCA    +++ KS+H  V     +  ++++++ ++
Sbjct: 45  AAHFYCRLVELNLNIFRFLLLCCISSCA----FRQGKSVHGRVAAASASPPDLHLSTKLV 100

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
             YA+ GD+  AR  FD       V+ +  ++  YA +G   EA+E+F  M+ +  +P+Q
Sbjct: 101 IFYARFGDVAAARKVFD-GMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQ 159

Query: 652 ATFVSV---------------MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
            T+ S                + AC+ KG    G +  +S                L+DM
Sbjct: 160 FTYGSAASACAGAGCARSGEQVHACAAKGRF-AGDMFVQS---------------ALMDM 203

Query: 697 LSRNGYLEDAKHVIEIM 713
             R G +EDA+ +   M
Sbjct: 204 HLRCGSVEDARQLFAEM 220


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 176/616 (28%), Positives = 306/616 (49%), Gaps = 14/616 (2%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV--AAAERVFYSI--SSDDVGCWNAMIG 219
           G ++H +ALK     +  V  S++ FY+    +   AA  VF  I  ++ DV  WN+++ 
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 220 GYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEV 277
             +H      AL+   SML    I    ++F  A    +       G  +H L  +    
Sbjct: 91  PLSH-HRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             ++ +  AL++MY K   +  A  VF+ M  ++ +SW  +  G++  K   +   LF +
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209

Query: 338 FILSGSRP---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
            +  G  P   N    + +L      L L +G+Q+  L +  G +   +V +SL+ M+ +
Sbjct: 210 ML--GECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAK 267

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
            G ++ A  VF++   +N  TW+ +++GY  N      ++ F  +  +G      T   V
Sbjct: 268 AGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGV 327

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  C          Q HG ++K GF    Y+ S+L+  Y   G + ++ E  N    LD+
Sbjct: 328 LNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDI 387

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
             W AM++  V  G   +A+ ++  + + G  P+   + ++L +CA + A +  K +H  
Sbjct: 388 VLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQ 447

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           ++K GF     V SA+   Y+KCG+++   + F +     DVI +N++I  ++ +G  ++
Sbjct: 448 ILKFGFGLGASVGSALSTMYSKCGNLEDGMVVF-RRMPHRDVIAWNSIISGFSQNGRGND 506

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+ +F++MKL    P   TF++V+ ACSH GLVD+G   F+SM   YG+ P  D Y C+V
Sbjct: 507 AINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMV 566

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
           D+LSR G L +AK  IE +       ++R +L  CR   + ++G +A EKL+ L   + A
Sbjct: 567 DILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSA 626

Query: 755 AHVLLSK-RKRQREGN 769
           A++LLS     QR+ N
Sbjct: 627 AYILLSNIYAAQRKWN 642



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 185/372 (49%), Gaps = 1/372 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G QVHG +VK G    + ++N+L+ MY+K G       VF+   ERN ++W+ +++   
Sbjct: 238 MGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYS 297

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNG  +  ++M+  M   GF P EF +  V+  C  +G    G   H   +K+  E   +
Sbjct: 298 QNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVY 357

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK G +  A+  F   S  D+  W AM+ G+   G   +AL + + M  EG
Sbjct: 358 VKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEG 417

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  T  + L+ C+ +A  + G+Q+H  I++       S+ +AL  MY K   ++   
Sbjct: 418 VFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGM 477

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF RM  +DVI+WN++  GFS+N       +LF +  L G+ P+ VTF  +L  C  + 
Sbjct: 478 VVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMG 537

Query: 362 DLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            +D G    + +    G     +  + ++ +  R G +  A    ++++  + T    ++
Sbjct: 538 LVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIV 597

Query: 421 SGYCFNCCDADV 432
            G C +  D DV
Sbjct: 598 LGACRSLRDFDV 609



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 130/549 (23%), Positives = 242/549 (44%), Gaps = 7/549 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG--YFGWGLRVFDEM--AERNLVSWTLIVS 118
           G  +H   +K G ++   + N+LI  YS     +      VF ++  A R++ SW  +++
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIE 177
               +            + ++  +P+  +  +         ++  G  +H  A K+    
Sbjct: 91  PLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSAS 150

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            N FV  ++LN Y KLG +  A+ VF  +   +   W AM+ GYA      EA  +   M
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210

Query: 238 LFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           L E  +  +++     L   S+     +G Q+HGL+++  +   +S+ N+L+ MY K+  
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGC 270

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           MD AF VFE   +++ I+W+ +  G+S+N N      +F +   +G  P   T   +L  
Sbjct: 271 MDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNA 330

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  +  L  G Q   L +  GF  +  V S+L+ M+ +CG +  A   F+  S  +I  W
Sbjct: 331 CSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLW 390

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             +++G+  N      L  +  + + GV  N  T   ++  C      +   Q+H  I+K
Sbjct: 391 TAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILK 450

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            GF     + S+L   Y   G L++           D+ +W +++S     G  ++A+ +
Sbjct: 451 FGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINL 510

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYA 595
           F  +   G  PD      +L +C+ +G   R  +    +IK  G    +   + ++D  +
Sbjct: 511 FEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILS 570

Query: 596 KCGDIKGAR 604
           + G +  A+
Sbjct: 571 RAGMLSEAK 579


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/530 (28%), Positives = 266/530 (50%), Gaps = 36/530 (6%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFS 323
           +QIH  ++R+ +       + LI     S    +DYA +VF+++   ++ +WNTL   ++
Sbjct: 52  KQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYA 111

Query: 324 ENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
            + NP Q+  +F + +  S   P+  TF  L++   +L +L  G     + +      + 
Sbjct: 112 SSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDV 171

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            + +SLI+ + +CG + + + VF N+  +++ +WN +++ +    C  + L+ F  +   
Sbjct: 172 FILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQ 231

Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYI--- 485
            V+ NG T   V+  C +  + +    +H  I +                ++ CG +   
Sbjct: 232 NVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDA 291

Query: 486 --------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
                          ++++  Y   G+ D +    +     D+A+W A++SA    G   
Sbjct: 292 KRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPK 351

Query: 532 EAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
           EA+ +FH L +    KPDE  L + L++CA +GA      IH ++ K G     ++ +++
Sbjct: 352 EALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSL 411

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           ID Y KCGD++ A M F  S    DV V++ +I   A HG   +A+ +F KM+   ++P+
Sbjct: 412 IDMYCKCGDLQKALMVF-HSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPN 470

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TF +++ ACSH GLV++G   F  M+  YG+ P    Y C+VD+L R G LE+A  +I
Sbjct: 471 AVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELI 530

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E MP  P+ +V+ +LL  C IH N  L E A  +L+ L P N  A+VLLS
Sbjct: 531 EKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLS 580



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 144/597 (24%), Positives = 268/597 (44%), Gaps = 72/597 (12%)

Query: 50  SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLI--AMYSKCGYFGWGLRVFDEMAE 107
           +LSL +         Q+H  +++ G   D F  + LI  A  S      +  +VFD++  
Sbjct: 38  TLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            NL +W  ++ A   +      L +++ M   +   P++F    ++K    +     G +
Sbjct: 98  PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
            H   +K+ +  + F+  S+++FYAK G++    RVF +I   DV  WN+MI  +   G 
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGC 217

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EAL +   M  + +  +  T +  L  C+  +DF+ GR +H  I R+ +  S+++ NA
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNA 277

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE---------------NKN---- 327
           ++DMY K   ++ A ++F++M +KD++SW T+  G+++               N++    
Sbjct: 278 MLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAW 337

Query: 328 ------------PGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLG------LQ 368
                       P +   LFH+  LS + +P+ VT    L  C +L  +DLG      ++
Sbjct: 338 NALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIK 397

Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
            Q + L+C      ++T+SLI M+C+CG ++ A  VF +V  K++  W+ +++G   +  
Sbjct: 398 KQGMKLNC------HLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGH 451

Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQ---IHGAIIKTGFSS 481
             D +  F  + E  V+ N  TF  ++  C       E +    Q   ++G +      +
Sbjct: 452 GKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYA 511

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL- 540
           C      ++      G L+ + E     E++ MA   ++  AL+     HE V +     
Sbjct: 512 C------MVDILGRAGLLEEAVEL---IEKMPMAPAASVWGALLGACTIHENVVLAEQAC 562

Query: 541 -----VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
                +E G     Y+L  + N  A  G + R   +   +  +G   E   +S  +D
Sbjct: 563 SQLIELEPGNH-GAYVL--LSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVD 616



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 38/413 (9%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           FL K+ S  E L +   G   HG ++K+   +D+F+ N+LI  Y+KCG  G G RVF  +
Sbjct: 141 FLIKAASELEELFT---GKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197

Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
             R++VSW  +++A +Q G  +  L+++ +M+T    PN   +  V+  C      EFG 
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257

Query: 166 SIHCFALKIRI-------------------------------EKNPFVGCSVLNFYAKLG 194
            +H +  + RI                               EK+     ++L  YAK+G
Sbjct: 258 WVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIG 317

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINAL 253
           +  AA+ +F ++ + D+  WNA+I  Y  CG   EAL +   + L +    D+ T ++ L
Sbjct: 318 EYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTL 377

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
             C+ +   D+G  IH  I +  ++ +  +  +LIDMY K   +  A  VF  +  KDV 
Sbjct: 378 SACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVF 437

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ-LQCL 372
            W+ +  G + + +     +LF K      +PN VTF+ +L  C  +  ++ G      +
Sbjct: 438 VWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 497

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSGYC 424
            L  G L      + ++ +  R G +E A  + + +      + W  LL G C
Sbjct: 498 ELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL-GAC 549



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 58/126 (46%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D + L  +LS    L +  LG  +H +I K G   +  L  +LI MY KCG     L 
Sbjct: 367 KPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALM 426

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF  +  +++  W+ +++    +G     + ++  M+ +   PN     +++  C  +G 
Sbjct: 427 VFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 486

Query: 161 SEFGYS 166
            E G +
Sbjct: 487 VEEGRT 492


>gi|302814338|ref|XP_002988853.1| hypothetical protein SELMODRAFT_128850 [Selaginella moellendorffii]
 gi|300143424|gb|EFJ10115.1| hypothetical protein SELMODRAFT_128850 [Selaginella moellendorffii]
          Length = 981

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 188/734 (25%), Positives = 340/734 (46%), Gaps = 30/734 (4%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           K+L+    L     G  +H   ++ GF  D+ ++  + ++YSK    G  L V    A  
Sbjct: 248 KALNACSGLGDLEQGRVLHEQAIEKGFHADVRVEAAIFSLYSK----GQNLDVLFNYAPH 303

Query: 109 --NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
             ++V WT  ++A+ + G     ++ +  M+  G  P+   + +++           G  
Sbjct: 304 HDSVVLWTRRMAASTKQGHSATTMQYFGLMQLEGIKPDRVTLLTIVDALDRSCFLAVGRM 363

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           +H  A ++ +     +  +V+N YA+ G +  A RVF  I  D +  WN +IG Y H  +
Sbjct: 364 VHSHARELGLGGLASLMNAVMNMYARCGSLEEAVRVFAEIRKDLIS-WNTIIGAYVHYAH 422

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS---- 282
             EA+N+   M  +G   DK T +  L+ CS    F   + IH  ++    E   +    
Sbjct: 423 YEEAINLFQQMQLQGFLPDKITLLAMLKVCSNSKFFLKSKLIHACVVELGDERGYARDTF 482

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +  AL+D Y K   ++ A  VFE ++  D++V+ W  +   + ++   G+    F    L
Sbjct: 483 VATALLDTYSKCGRLEEARCVFETLSLGDRNVVCWTAMVSAYGQHGFFGEALLYFQLMQL 542

Query: 341 SGSRPNHVTFSILLRQCGKLL----DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
            G  PN VT + +L  C K+     +L   +++    +  G   E  V ++ + +  + G
Sbjct: 543 QGEAPNKVTMAAVLTACSKVELEADELKSVMRVYRCCVELGQDRELVVGNAALSVHAKLG 602

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN--IWESGVEVNGCTFFYV 454
            +  A  +F  +  +N+ +WN +LS  C    ++   +      + ES    +  TF  +
Sbjct: 603 NLREAREIFSRMWTRNVVSWNSILSA-CAQVGESRECRCLFRHMLLESDSRPDNYTFITI 661

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYI-CSSLIKSYVNFGQLDNSFEFSNGAERLD 513
           +  C +S      G+I   + +    S   I  ++L+  Y   G L+++       ++ D
Sbjct: 662 LGVCKQSREDLTHGRILHQLARESSGSLDLIVATALVHMYSECGSLEDAATTFGTIQQPD 721

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHP 573
           + SW AM+SAL H G       +F  + ++   PD      +LN+C A    +  + +  
Sbjct: 722 VVSWNAMISALSHYGEFQRVFDLFQRMKDSKVAPDSLTFVAVLNACTANSELELGQRVFS 781

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF-NSNDVIVYNTLIMAYAHHGLV 632
             ++ GF  EV  A+A I+ + KCG ++ A   F     +   ++ +N L  A AH    
Sbjct: 782 EAVRAGFGAEV--AAAGINLFGKCGKLEAAVETFLTLVPHEKSLLAWNGLATALAHGARP 839

Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
           SE + + + M+L+ + P   TFVSV+S  SH G V+  C    SM + +G+ PS   Y C
Sbjct: 840 SEVIRVLECMRLSGIDPDLVTFVSVLSTLSHAGFVEACCYQLSSMSTDHGLTPSATHYCC 899

Query: 693 LVDMLSRNGYLEDAKHVIEIMPF------QPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
           ++D+L R G L++A+ ++            P   ++ S L+ C IHG+ E G+ A E++L
Sbjct: 900 VIDVLGRAGLLDEAEEMLSSSRSSGGSGDDPLVVLWTSFLAACGIHGDSERGKRAVERIL 959

Query: 747 LLLPKNDAAHVLLS 760
              P++ A +V+LS
Sbjct: 960 ARQPEDAATYVVLS 973



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 160/688 (23%), Positives = 301/688 (43%), Gaps = 31/688 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  VH  I  L   +++FL N L+ MY  CG      R F +M  R  V WT ++ A  +
Sbjct: 65  GLLVHARISNLALDSNVFLGNRLVVMYLACGRPDEAQRSFYKMPNRGPVPWTSMIGALAR 124

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPF 181
              F     ++  M   G  P+   + +V+ VC ++         +H  A++   +    
Sbjct: 125 EFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCGNLEDRGRASRLLHSIAVETGRDSETI 184

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++    L D   A +VF  + + DV  WNAM+  Y       E L +   M    
Sbjct: 185 VGTALVSM---LPDFGHARQVFEGVLAKDVRTWNAMMDVYMRRFDYSEVLRLFQEM---D 238

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+ +F+ AL  CS + D + GR +H   I       + +  A+  +Y K   +D  F
Sbjct: 239 VVPDRSSFVKALNACSGLGDLEQGRVLHEQAIEKGFHADVRVEAAIFSLYSKGQNLDVLF 298

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
                     V+ W       ++  +   T   F    L G +P+ VT   ++    +  
Sbjct: 299 NYAPH--HDSVVLWTRRMAASTKQGHSATTMQYFGLMQLEGIKPDRVTLLTIVDALDRSC 356

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L +G  +   A   G     ++ ++++ M+ RCG++E A  VF  +  K++ +WN ++ 
Sbjct: 357 FLAVGRMVHSHARELGLGGLASLMNAVMNMYARCGSLEEAVRVFAEIR-KDLISWNTIIG 415

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII----KT 477
            Y       + +  F  +   G   +  T   +++ C  S+       IH  ++    + 
Sbjct: 416 AYVHYAHYEEAINLFQQMQLQGFLPDKITLLAMLKVCSNSKFFLKSKLIHACVVELGDER 475

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           G++   ++ ++L+ +Y   G+L+ +   FE  +  +R ++  W AM+SA    G   EA+
Sbjct: 476 GYARDTFVATALLDTYSKCGRLEEARCVFETLSLGDR-NVVCWTAMVSAYGQHGFFGEAL 534

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAI----GAYQRTKSIHPFVIKLGFNTEVYVASAV 590
             F  +   GE P++  +  +L +C+ +       +    ++   ++LG + E+ V +A 
Sbjct: 535 LYFQLMQLQGEAPNKVTMAAVLTACSKVELEADELKSVMRVYRCCVELGQDRELVVGNAA 594

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQP 649
           +  +AK G+++ AR  F + +  N V+ +N+++ A A  G   E   +F  M L ++ +P
Sbjct: 595 LSVHAKLGNLREAREIFSRMWTRN-VVSWNSILSACAQVGESRECRCLFRHMLLESDSRP 653

Query: 650 SQATFVSVMSACSH-KGLVDKGCLLFKSMDSQYGMQPSPD--CYGCLVDMLSRNGYLEDA 706
              TF++++  C   +  +  G +L +      G   S D      LV M S  G LEDA
Sbjct: 654 DNYTFITILGVCKQSREDLTHGRILHQLARESSG---SLDLIVATALVHMYSECGSLEDA 710

Query: 707 KHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
                 +  QP    + +++S    +G 
Sbjct: 711 ATTFGTIQ-QPDVVSWNAMISALSHYGE 737



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/528 (23%), Positives = 240/528 (45%), Gaps = 21/528 (3%)

Query: 143 PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERV 202
           P+++A   ++  C +      G  +H     + ++ N F+G  ++  Y   G    A+R 
Sbjct: 46  PDDYA--QLLDACAASKDLHQGLLVHARISNLALDSNVFLGNRLVVMYLACGRPDEAQRS 103

Query: 203 FYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADF 262
           FY + +     W +MIG  A   +   A +V  +ML EG+  D  T    +  C  + D 
Sbjct: 104 FYKMPNRGPVPWTSMIGALAREFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCGNLEDR 163

Query: 263 -DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG 321
               R +H + + +  +    +  AL+ M        +A +VFE +  KDV +WN +   
Sbjct: 164 GRASRLLHSIAVETGRDSETIVGTALVSML---PDFGHARQVFEGVLAKDVRTWNAMMDV 220

Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
           +    +  +   LF +  +    P+  +F   L  C  L DL+ G  L   A+  GF  +
Sbjct: 221 YMRRFDYSEVLRLFQEMDVV---PDRSSFVKALNACSGLGDLEQGRVLHEQAIEKGFHAD 277

Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN-ITTWNELLSGYCFNCCDADVLKTFCNIW 440
             V +++  ++ +   +++   +F+   + + +  W   ++        A  ++ F  + 
Sbjct: 278 VRVEAAIFSLYSKGQNLDV---LFNYAPHHDSVVLWTRRMAASTKQGHSATTMQYFGLMQ 334

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             G++ +  T   +V+   RS    +   +H    + G      + ++++  Y   G L+
Sbjct: 335 LEGIKPDRVTLLTIVDALDRSCFLAVGRMVHSHARELGLGGLASLMNAVMNMYARCGSLE 394

Query: 501 NSFEFSNGAE-RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +      AE R D+ SW  ++ A VH  H  EA+ +F  +   G  PD+  L  +L  C
Sbjct: 395 EAVRVF--AEIRKDLISWNTIIGAYVHYAHYEEAINLFQQMQLQGFLPDKITLLAMLKVC 452

Query: 560 AAIGAYQRTKSIHPFVIKL----GFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-SFNSN 614
           +    + ++K IH  V++L    G+  + +VA+A++D Y+KCG ++ AR  F+  S    
Sbjct: 453 SNSKFFLKSKLIHACVVELGDERGYARDTFVATALLDTYSKCGRLEEARCVFETLSLGDR 512

Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
           +V+ +  ++ AY  HG   EA+  F  M+L    P++ T  +V++ACS
Sbjct: 513 NVVCWTAMVSAYGQHGFFGEALLYFQLMQLQGEAPNKVTMAAVLTACS 560



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 221/497 (44%), Gaps = 17/497 (3%)

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I+ D Y  +  L  C+   D   G  +H  I    ++ ++ + N L+ MY+     D A 
Sbjct: 44  ISPDDYAQL--LDACAASKDLHQGLLVHARISNLALDSNVFLGNRLVVMYLACGRPDEAQ 101

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           + F +M ++  + W ++ G  +   +     S+FH  +L G  P+  T + ++  CG L 
Sbjct: 102 RSFYKMPNRGPVPWTSMIGALAREFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCGNLE 161

Query: 362 DLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           D     + L  +A+  G   E  V ++L+ M    G    A  VF+ V  K++ TWN ++
Sbjct: 162 DRGRASRLLHSIAVETGRDSETIVGTALVSMLPDFG---HARQVFEGVLAKDVRTWNAMM 218

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             Y      ++VL+ F    E  V  +  +F   +  C    + +    +H   I+ GF 
Sbjct: 219 DVYMRRFDYSEVLRLF---QEMDVVPDRSSFVKALNACSGLGDLEQGRVLHEQAIEKGFH 275

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           +   + +++   Y     LD  F ++   + + +  W   M+A   QGH+   +  F  +
Sbjct: 276 ADVRVEAAIFSLYSKGQNLDVLFNYAPHHDSVVL--WTRRMAASTKQGHSATTMQYFGLM 333

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G KPD   L TI+++          + +H    +LG      + +AV++ YA+CG +
Sbjct: 334 QLEGIKPDRVTLLTIVDALDRSCFLAVGRMVHSHARELGLGGLASLMNAVMNMYARCGSL 393

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           + A   F +     D+I +NT+I AY H+    EA+ +F +M+L    P + T ++++  
Sbjct: 394 EEAVRVFAEI--RKDLISWNTIIGAYVHYAHYEEAINLFQQMQLQGFLPDKITLLAMLKV 451

Query: 661 CSHKGLVDKGCLLFK---SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           CS+     K  L+      +  + G          L+D  S+ G LE+A+ V E +    
Sbjct: 452 CSNSKFFLKSKLIHACVVELGDERGYARDTFVATALLDTYSKCGRLEEARCVFETLSLGD 511

Query: 718 SPTV-YRSLLSGCRIHG 733
              V + +++S    HG
Sbjct: 512 RNVVCWTAMVSAYGQHG 528



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 111/236 (47%), Gaps = 8/236 (3%)

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
           E   E++   +  +++ C  S++      +H  I      S  ++ + L+  Y+  G+ D
Sbjct: 39  ERRAEISPDDYAQLLDACAASKDLHQGLLVHARISNLALDSNVFLGNRLVVMYLACGRPD 98

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
            +              W +M+ AL  + H H A ++FH+++  G  PD   L T+++ C 
Sbjct: 99  EAQRSFYKMPNRGPVPWTSMIGALAREFHFHSAFSVFHTMLLEGVPPDSPTLATVISVCG 158

Query: 561 AIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
            +    R ++ +H   ++ G ++E  V +A++       D   AR  F+    + DV  +
Sbjct: 159 NLEDRGRASRLLHSIAVETGRDSETIVGTALVSMLP---DFGHARQVFEGVL-AKDVRTW 214

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
           N ++  Y      SE + +F +M   ++ P +++FV  ++ACS  G +++G +L +
Sbjct: 215 NAMMDVYMRRFDYSEVLRLFQEM---DVVPDRSSFVKALNACSGLGDLEQGRVLHE 267


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/541 (27%), Positives = 275/541 (50%), Gaps = 35/541 (6%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KD 311
           L+  S     +  +Q+H  I+R+ +   ++     +     S  + YA  +F  ++   +
Sbjct: 19  LEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPE 78

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            I +N+L    S +  P  T   + +    G R + ++F  +L+   K+  L  G++L  
Sbjct: 79  SIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHG 138

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDA 430
            A     L +  V + L+ M+  CG +  A +VFD +S +++ TWN ++  YC F   D 
Sbjct: 139 FAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLD- 197

Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK-------------- 476
           +  K F  + +S V  +      +V  C R+ N +    I+  +I+              
Sbjct: 198 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257

Query: 477 TGFSSCG-----------------YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           T ++  G                 ++ ++++  Y   G+LD++    +  E  D+  W  
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTT 317

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           M+SA     H  EA+ +F  +  +G KPD   + +++++C  +G   + K +H +    G
Sbjct: 318 MISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNG 377

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
             + + + +A+I+ YAKCG +  AR  F++   + +V+ ++++I A+A HG  S+++ +F
Sbjct: 378 LESVLPIDNALINMYAKCGGLDAARDVFEK-MPTRNVVSWSSMINAFAMHGEASDSLSLF 436

Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
            +MK  N++P++ TFV V+  CSH GLV++G  +F SM  +Y + P  + YGC+VD+  R
Sbjct: 437 AQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGR 496

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
              L +A  VIE MP  P+  ++ SL+S CR+HG  ELGE A++++L L P +D A VL+
Sbjct: 497 ANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLM 556

Query: 760 S 760
           S
Sbjct: 557 S 557



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 188/420 (44%), Gaps = 43/420 (10%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D I     L     + +   G ++HG   K+   +D F++  L+ MY+ CG   +   
Sbjct: 111 RFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARN 170

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VFDEM++R++V+W  ++    + G  D   K++ +MK +  MP+E  + +++  C   G 
Sbjct: 171 VFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGN 230

Query: 161 SEFGYSIHCFALK--IRIE-----------------------------KNPFVGCSVLNF 189
             +  +I+ F ++  +R++                             +N FV  ++++ 
Sbjct: 231 MRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSG 290

Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
           Y+K G +  A  +F      D+ CW  MI  YA   +  EAL V   M   GI  D  T 
Sbjct: 291 YSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTM 350

Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
           ++ +  C  +   D  + +H     + +E  + I NALI+MY K  G+D A  VFE+M  
Sbjct: 351 LSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPT 410

Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
           ++V+SW+++   F+ +     + SLF +       PN VTF  +L  C        GL  
Sbjct: 411 RNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSH-----SGLVE 465

Query: 370 QCLALHCGFLDEENVTSS------LIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
           +   +     DE N+T        ++ +F R   +  A  V +++    N+  W  L+S 
Sbjct: 466 EGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSA 525



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 185/441 (41%), Gaps = 45/441 (10%)

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           ++GE    +  Y  ++  G   +  +   ++K    + A   G  +H FA KI    +PF
Sbjct: 91  RSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPF 150

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V   +++ YA  G +  A  VF  +S  DV  WN MI  Y   G   EA  +   M    
Sbjct: 151 VETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSN 210

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  D+    N +  C    +    R I+  +I ++V     ++ AL+ MY  +  MD A 
Sbjct: 211 VMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAM 270

Query: 302 KVFERMAD-------------------------------KDVISWNTLFGGFSENKNPGQ 330
           + F +M+                                KD++ W T+   ++E+ +P +
Sbjct: 271 EFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQE 330

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
              +F +   SG +P+ VT   ++  C  L  LD    +       G      + ++LI 
Sbjct: 331 ALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALIN 390

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG ++ A  VF+ +  +N+ +W+ +++ +  +   +D L  F  + +  VE N  T
Sbjct: 391 MYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVT 450

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY---VN-FGQLDNSFEFS 506
           F  V+  C  S   +   +I  ++         Y  +  I+ Y   V+ FG+ +   E  
Sbjct: 451 FVGVLYGCSHSGLVEEGKKIFASMTDE------YNITPKIEHYGCMVDLFGRANLLREAL 504

Query: 507 NGAERLDMAS----WGAMMSA 523
              E + MA     WG++MSA
Sbjct: 505 EVIESMPMAPNVVIWGSLMSA 525



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/487 (20%), Positives = 195/487 (40%), Gaps = 70/487 (14%)

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G   D+ +F   L+  S V+    G ++HG   +        +   L+DMY     ++YA
Sbjct: 109 GGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYA 168

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK- 359
             VF+ M+ +DV++WNT+   +       +   LF +   S   P+ +    ++  CG+ 
Sbjct: 169 RNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRT 228

Query: 360 ------------LLDLDLGLQLQ-------------CLALHCGFLDEEN-----VTSSLI 389
                       L++ D+ +                C+ +   F  + +     V+++++
Sbjct: 229 GNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMV 288

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
             + + G ++ A  +FD    K++  W  ++S Y  +    + L+ F  +  SG++ +  
Sbjct: 289 SGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVV 348

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C           +H      G  S   I ++LI  Y   G LD + +     
Sbjct: 349 TMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKM 408

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
              ++ SW +M++A    G   +++++F  + +   +P+E     +L  C+  G  +  K
Sbjct: 409 PTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGK 468

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            I                +++ D Y     I+                 Y  ++  +   
Sbjct: 469 KIF---------------ASMTDEYNITPKIEH----------------YGCMVDLFGRA 497

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
            L+ EA+E+ + M +A   P+   + S+MSAC   G ++ G L  K +     ++  PD 
Sbjct: 498 NLLREALEVIESMPMA---PNVVIWGSLMSACRVHGELELGELAAKRI-----LKLEPDH 549

Query: 690 YGCLVDM 696
            G LV M
Sbjct: 550 DGALVLM 556



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 61/130 (46%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D + +   +S   NL +      VH +    G  + + + N LI MY+KCG    
Sbjct: 341 SGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDA 400

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF++M  RN+VSW+ +++A   +GE    L ++  MK     PNE     V+  C  
Sbjct: 401 ARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSH 460

Query: 158 MGASEFGYSI 167
            G  E G  I
Sbjct: 461 SGLVEEGKKI 470


>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 269/525 (51%), Gaps = 3/525 (0%)

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML      +  T ++ ++  S +   D+ R I G +I+   E  +S+  ALI  Y     
Sbjct: 1   MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFY-SDYD 59

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M   +K+F +   KD++ W+ +     ++   G+   +F      G  PNHV+   +L  
Sbjct: 60  MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPA 119

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           C  +  L  G ++   ++   F    NV +SL+ M+ +C   + +  VFD +  K++ +W
Sbjct: 120 CANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISW 179

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
             ++ G   N C  +  K F  +  S    +      ++    +++  +     HG ++K
Sbjct: 180 TTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLK 239

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G  +   I ++L++ Y  FG+L+++    +   + D  SW AM+S   H  H + A+  
Sbjct: 240 NGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALET 299

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +    E+P+E    ++L +C+ IGA +  +SI     K G+ +  +++SA+ID Y K
Sbjct: 300 FKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCK 359

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
            G I   R  F++   + D++ ++++I  Y  +G   EA+E F  M    ++P++  F+S
Sbjct: 360 FGRINQGRAIFNE-IPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFIS 418

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+SACSH GL  +G   F SM+ +YG+ P    Y C+VD++SR G +E A   +  MP +
Sbjct: 419 VLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPME 478

Query: 717 PSPTVYRSLLSGCR-IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           P   ++ +LL+GCR  HG+ E+ E  +E+L+ L P+N + +V+LS
Sbjct: 479 PDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILS 523



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 226/464 (48%), Gaps = 15/464 (3%)

Query: 68  GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
           G ++KLGF +++ +   LI  YS     G   ++F++   ++LV W+ +VSA +++G++ 
Sbjct: 34  GSVIKLGFESEVSVATALIGFYSDYD-MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 92

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
              +++  M+ +G  PN  ++ S++  C ++GA  FG  IH F++K        V  S++
Sbjct: 93  EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 152

Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           + YAK  +  A+  VF  I   D+  W  +I G        EA    S M F     D+ 
Sbjct: 153 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADET 212

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
              + +       +   G   HG ++++ +   +SI  AL+ MY K   ++ A  VF+++
Sbjct: 213 IVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQL 272

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             KD ISW+ +    + +++P      F +   +  RPN +TF  LL+ C  +   +LG 
Sbjct: 273 NKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGE 332

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +Q  A   G+L    ++S+LI ++C+ G +    ++F+ +  K++  W+ +++GY  N 
Sbjct: 333 SIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNG 392

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETC--CRSENQ-----QMVGQIHGAIIKTGFS 480
           C  + L+TF N+   GV+ N   F  V+  C  C  E++       + Q +G I K    
Sbjct: 393 CGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHY 452

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
           +C      ++      G ++ + +F N      D   WGA+++ 
Sbjct: 453 AC------MVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAG 490



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 150/302 (49%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           N+ + + G ++HG  +K  F     + N+L+ MY+KC  F   + VFD++ E++L+SWT 
Sbjct: 122 NVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTT 181

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           I+   I+N       K +  M+ + F  +E  V  ++   +     +FG + H F LK  
Sbjct: 182 IIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNG 241

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +     +G ++L  YAK G++ +A  VF  ++  D   W+AMI  +AH  + + AL    
Sbjct: 242 LLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFK 301

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
            M       ++ TF++ LQ CSL+   ++G  I     ++    +  + +ALID+Y K  
Sbjct: 302 QMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFG 361

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
            ++    +F  +  KD++ W+++  G+  N    +    F   +  G +PN V F  +L 
Sbjct: 362 RINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLS 421

Query: 356 QC 357
            C
Sbjct: 422 AC 423



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 13/300 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G   HG ++K G    + +   L+ MY+K G     + VFD++ +++ +SW+ ++S   
Sbjct: 229 FGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHA 288

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            +      L+ +  M++    PNE    S+++ C  +GA E G SI   A K     N F
Sbjct: 289 HSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAF 348

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K G +     +F  I + D+ CW++MI GY   G G EAL   S+ML  G
Sbjct: 349 LSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACG 408

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL------IDMYIKSS 295
           +  ++  FI+ L  CS       G +  G    S +E    I+  L      +D+  +  
Sbjct: 409 VKPNEVVFISVLSACS-----HCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRG 463

Query: 296 GMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
            ++ A +   +M  + D   W  L  G        + A L  + ++ G  P + ++ ++L
Sbjct: 464 NIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLI-GLDPQNTSYYVIL 522



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R + I     L     + ++ LG  +  H  K G+ ++ FL + LI +Y K G    G  
Sbjct: 309 RPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRA 368

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F+E+  ++LV W+ +++    NG  D  L+ + +M   G  PNE    SV+  C   G 
Sbjct: 369 IFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGL 428

Query: 161 SEFGYSIHCFALKIR----IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWN 215
              G+S  CF+   +    I K P   C V +  ++ G++  A +    +  + D   W 
Sbjct: 429 EHEGWS--CFSSMEQKYGIIPKLPHYACMV-DLISRRGNIEGALQFVNKMPMEPDKRIWG 485

Query: 216 AMIGG 220
           A++ G
Sbjct: 486 ALLAG 490


>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
 gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
          Length = 561

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/525 (29%), Positives = 273/525 (52%), Gaps = 8/525 (1%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +G+T +  TF ++LQ C L+ D+ +G  IHG  ++      + +  +L+ MY     ++ 
Sbjct: 4   QGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLES 63

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A KVF  +  KD + WN++  G  +N+   +   LF K +  G  P   T+S++L  CGK
Sbjct: 64  ANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGK 123

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
           L D   G  +    +    L +  + ++L+ M+C CG  E   +VF+ +   ++ +WN +
Sbjct: 124 LGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSM 183

Query: 420 LSGYCFNCCDADVLKTFCNIWESGV---EVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           +SGY  N   AD +  F  +   GV   + +  TF  V+              +H  ++K
Sbjct: 184 ISGYAENGEGADAMNLFLQL--VGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLK 241

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
            G     +I ++L+  Y+  G ++++ +  N  E  D+  W  M+      G    A+ +
Sbjct: 242 VGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKL 301

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
           F  +   G K D + L   L++CA +    + + IH   +K G + E+ V  +++  YAK
Sbjct: 302 FSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAK 361

Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
            GD+  AR  F Q  N  D+  +N+++  Y+ HG+  EAM IF K+ +   +P Q TF+S
Sbjct: 362 NGDLHAARSIFSQVSNP-DLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLS 420

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           ++SACSH GLV++G LL+  +  +  + P P  Y C+V +LSR G L++A+ +I    + 
Sbjct: 421 LLSACSHSGLVEEGKLLWSHI-KKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYS 479

Query: 717 PSP-TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
                ++R+LLS C    N ++G  A+E++L L P++ A H+LLS
Sbjct: 480 KDHLELWRTLLSSCVNKRNLKIGVRAAEEILQLEPEDSATHILLS 524



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 196/408 (48%), Gaps = 5/408 (1%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+   +G+ +HG  VK GF ND+F+Q +L+ MYS CG      +VF  + +++ V W  +
Sbjct: 23  LEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESANKVFGCVVQKDAVLWNSM 82

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +   ++N + + G+ ++  M  +G +P EF    ++  C  +G   +G  IH   + + +
Sbjct: 83  IFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQVIVLNV 142

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             +  +  ++L+ Y   GD      VF  I + D+  WN+MI GYA  G G +A+N+   
Sbjct: 143 LADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMISGYAENGEGADAMNLFLQ 202

Query: 237 MLFEGITM---DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIK 293
           ++  G+ +   D+YTF   +   S  +    G+ +H  +++   E S+ I   L+ MY+K
Sbjct: 203 LV--GVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLK 260

Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
           +  ++ A +VF  +  KDV+ W  +  G S          LF      G + +    S  
Sbjct: 261 NGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGA 320

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  L  L+ G  +    +  G   E +V  SL++M+ + G +  A S+F  VS  ++
Sbjct: 321 LSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDL 380

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
             WN +L GY  +    + +  F  I  +G   +  TF  ++  C  S
Sbjct: 381 KCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHS 428



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  ++ L    D+ LQN L+ MY  CG    G  VF+++   +LVSW  ++S   +
Sbjct: 130 GQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMISGYAE 189

Query: 123 NGEFDMGLKMYVDMKTNGFMP--NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NGE    + +++ +    F+P  +E+   +V+    +  A+ +G  +H   LK+  E++ 
Sbjct: 190 NGEGADAMNLFLQL-VGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSV 248

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+G ++L+ Y K GD+ +AE+VF  I   DV  W  MI G++  G G  A+ + S M  E
Sbjct: 249 FIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHE 308

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G  +D +    AL  C+ +A  + G  IH   ++   +  IS+  +L+ MY K+  +  A
Sbjct: 309 GYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAA 368

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +F ++++ D+  WN++ GG+S++    +   +F K +++G RP+ VTF  LL  C   
Sbjct: 369 RSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHS 428

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNE 418
             ++ G  L         +      S ++ +  R G ++ A  +    +Y   ++  W  
Sbjct: 429 GLVEEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRT 488

Query: 419 LLSGYCFN 426
           LLS  C N
Sbjct: 489 LLSS-CVN 495



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/443 (23%), Positives = 193/443 (43%), Gaps = 1/443 (0%)

Query: 136 MKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
           M T G  PN     S ++ C  +     G  IH  ++K     + FV  S+L  Y+  GD
Sbjct: 1   MGTQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGD 60

Query: 196 VAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQG 255
           + +A +VF  +   D   WN+MI G        E + +   M+  GI   ++T+   L  
Sbjct: 61  LESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNA 120

Query: 256 CSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           C  + D   G+ IH  +I   V   + + NAL+DMY      +  F VF ++ + D++SW
Sbjct: 121 CGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSW 180

Query: 316 NTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           N++  G++EN       +LF + + +   +P+  TF+ ++           G  L    L
Sbjct: 181 NSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVL 240

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G      + ++L+ M+ + G +E A  VF+ +  K++  W E++ G+         +K
Sbjct: 241 KVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIK 300

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  +   G +++       +  C           IH   +K G  +   +C SL+  Y 
Sbjct: 301 LFSMMCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYA 360

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G L  +    +     D+  W +M+      G   EA+ IF  ++  G++PD+    +
Sbjct: 361 KNGDLHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLS 420

Query: 555 ILNSCAAIGAYQRTKSIHPFVIK 577
           +L++C+  G  +  K +   + K
Sbjct: 421 LLSACSHSGLVEEGKLLWSHIKK 443



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 2/289 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           + D    A  +S +    +   G  +H  ++K+G    +F+   L++MY K G      +
Sbjct: 210 KPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQ 269

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF+ +  +++V WT ++    + G  +  +K++  M   G+  + FA+   +  C  +  
Sbjct: 270 VFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSACADLAT 329

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
              G  IH   +K   +    V  S+++ YAK GD+ AA  +F  +S+ D+ CWN+M+GG
Sbjct: 330 LNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGG 389

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y+  G   EA+ + + +L  G   D+ TF++ L  CS     + G+ +   I +++V   
Sbjct: 390 YSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPG 449

Query: 281 ISIVNALIDMYIKSSGMDYAFK-VFERMADKDVIS-WNTLFGGFSENKN 327
               + ++ +  ++  +D A + + +    KD +  W TL       +N
Sbjct: 450 PKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLSSCVNKRN 498


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/576 (26%), Positives = 279/576 (48%), Gaps = 37/576 (6%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ YA LG++  A ++F      +   W++++ GY   G   E L   S M  +G    
Sbjct: 74  MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           +YT  + L+ CS ++    G+ IH   I+ ++E +I +   L+DMY K   +  A  +F 
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193

Query: 306 RMAD-KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
            + D K+ + W  +  G+++N    +    F +    G   NH TF  +L  C  +    
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
            G Q+    +  GF     V S+L+ M+ +CG +  A  + D +   ++  WN ++ G  
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            +    + L  F  +    + ++  T+  V+++    +N ++   +H   IKTGF +C  
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           + ++L+  Y   G L  + +  N     D+ SW ++++  VH G + +A+ +F  +  A 
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433

Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
              D++++  + ++CA +   +  + +H   IK    + +   +++I  YAKCG ++ A 
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAI 493

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
              D S  + +VI +  +I+ YA +GLV                                
Sbjct: 494 RVXD-SMETRNVISWTAIIVGYAQNGLV-------------------------------- 520

Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
              + G   F+SM+  YG++P+ D Y C++D+L R G + +A+H++  M  +P  T+++S
Sbjct: 521 ---ETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKS 577

Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           LLS CR+HGN ELGE A + L+ L P N   +VLLS
Sbjct: 578 LLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLS 613



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 236/477 (49%), Gaps = 4/477 (0%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D +  N +I+ Y+  G      ++F+E    N ++W+ +VS   +NG    GL+ +  M 
Sbjct: 67  DKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMW 126

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           ++G  P+++ +GSV++ C ++     G  IHC+A+KI++E N FV   +++ Y+K   + 
Sbjct: 127 SDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLL 186

Query: 198 AAERVFYSISS-DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            AE +F+S+    +   W AM+ GYA  G   +A+     M  +G+  + +TF + L  C
Sbjct: 187 EAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTAC 246

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + ++ +  GRQ+HG II S    ++ + +AL+DMY K   +  A  + + M   DV+ WN
Sbjct: 247 TSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWN 306

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
           ++  G   +    +   LFHK      R +  T+  +L+      +L +G  +  L +  
Sbjct: 307 SMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKT 366

Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           GF   + V+++L+ M+ + G +  A  VF+ +  K++ +W  L++GY  N      L+ F
Sbjct: 367 GFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLF 426

Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
           C++  + V+++      V   C      +   Q+H   IK+   S     +SLI  Y   
Sbjct: 427 CDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC 486

Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA-GEKP--DEY 550
           G L+++    +  E  ++ SW A++      G      + F S+ +  G KP  D Y
Sbjct: 487 GCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKPASDRY 543



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 184/370 (49%), Gaps = 11/370 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAI 121
           G  +H + +K+    +IF+   L+ MYSKC        +F  + +R N V WT +++   
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           QNGE    ++ + +M+  G   N F   S++  C S+ A  FG  +H   +      N +
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVY 272

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           V  ++++ YAK GD+A+A  +  ++  DDV CWN+MI G    GY  EAL +   M    
Sbjct: 273 VQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRD 332

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I +D +T+ + L+  +   +  IG  +H L I++  +   ++ NAL+DMY K   +  A 
Sbjct: 333 IRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCAL 392

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
            VF ++ DKDVISW +L  G+  N    +   LF     +    +    + +   C +L 
Sbjct: 393 DVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELT 452

Query: 362 DLDLGLQLQCLALHCGFLDEE-----NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
            ++ G Q     +H  F+        +  +SLI M+ +CG +E A  V D++  +N+ +W
Sbjct: 453 VIEFGRQ-----VHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISW 507

Query: 417 NELLSGYCFN 426
             ++ GY  N
Sbjct: 508 TAIIVGYAQN 517



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 138/275 (50%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           L+   ++ +   G QVHG I+  GF  ++++Q+ L+ MY+KCG       + D M   ++
Sbjct: 243 LTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDV 302

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V W  ++   + +G  +  L ++  M       ++F   SV+K   S    + G S+H  
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K   +    V  ++++ YAK G+++ A  VF  I   DV  W +++ GY H G+  +A
Sbjct: 363 TIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKA 422

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           L +   M    + +D++        C+ +   + GRQ+H   I+S     +S  N+LI M
Sbjct: 423 LQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITM 482

Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           Y K   ++ A +V + M  ++VISW  +  G+++N
Sbjct: 483 YAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN 517



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 36/352 (10%)

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE-------------------------- 418
           ++ L+    + G V+ A  +FD + Y++  TWN                           
Sbjct: 40  SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXNS 99

Query: 419 -----LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
                L+SGYC N C+ + L+ F  +W  G + +  T   V+  C           IH  
Sbjct: 100 ITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCY 159

Query: 474 IIKTGFSSCGYICSSLIKSYVNFG-QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            IK    +  ++ + L+  Y      L+  + F +  +R +   W AM++     G + +
Sbjct: 160 AIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLK 219

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A+  F  +   G + + +   +IL +C +I AY   + +H  +I  GF   VYV SA++D
Sbjct: 220 AIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVD 279

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            YAKCGD+  ARM  D +   +DV+ +N++I+    HG + EA+ +F KM   +++    
Sbjct: 280 MYAKCGDLASARMILD-TMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDF 338

Query: 653 TFVSVM-SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           T+ SV+ S  S K L  K      S+  + G          LVDM ++ G L
Sbjct: 339 TYPSVLKSLASCKNL--KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNL 388



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 123/258 (47%), Gaps = 12/258 (4%)

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           Y  + +I +Y N G L  + +  N     +  +W +++S     G   E +  F  +   
Sbjct: 69  YTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSD 128

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G+KP +Y LG++L +C+ +      K IH + IK+     ++VA+ ++D Y+KC  +  A
Sbjct: 129 GQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEA 188

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
              F    +  + + +  ++  YA +G   +A++ F +M+   ++ +  TF S+++AC+ 
Sbjct: 189 EYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTS 248

Query: 664 K-----GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
                 G    GC+++       G  P+      LVDM ++ G L  A+ +++ M     
Sbjct: 249 ISAYAFGRQVHGCIIWS------GFGPNVYVQSALVDMYAKCGDLASARMILDTMEID-D 301

Query: 719 PTVYRSLLSGCRIHGNKE 736
              + S++ GC  HG  E
Sbjct: 302 VVCWNSMIVGCVTHGYME 319



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 3/177 (1%)

Query: 49  KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER 108
           KSL+  +NLK   +G  VH   +K GF     + N L+ MY+K G     L VF+++ ++
Sbjct: 345 KSLASCKNLK---IGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK 401

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
           +++SWT +V+  + NG  +  L+++ DM+T     ++F V  V   C  +   EFG  +H
Sbjct: 402 DVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVH 461

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
              +K           S++  YAK G +  A RV  S+ + +V  W A+I GYA  G
Sbjct: 462 ANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNG 518



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVH + +K    + +  +N+LI MY+KCG     +RV D M  RN++SWT I+    
Sbjct: 456 FGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYA 515

Query: 122 QNGEFDMGLKMYVDM-KTNGFMP 143
           QNG  + G   +  M K  G  P
Sbjct: 516 QNGLVETGQSYFESMEKVYGIKP 538


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 153/530 (28%), Positives = 277/530 (52%), Gaps = 37/530 (6%)

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           +   +D +   + L+ C+  +  D+GR++HG   ++     + + NAL++MY K   +  
Sbjct: 82  DAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVS 141

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF++M ++DV+SW T+ G +  +K  G+   L  +    G + + V    L+   G 
Sbjct: 142 ARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGN 201

Query: 360 LLDLDLGLQLQCLALHCGFL-----DEE---NVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
           LLD+  G      A+H G++     DE+   ++T++LI M+C+ G +  A  +FD +S +
Sbjct: 202 LLDMKSGR-----AVH-GYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKR 255

Query: 412 NITTWNELLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           ++ +W  +++G C   C  D   K F  + E  +  N  T   ++  C       +    
Sbjct: 256 SVVSWTVMIAG-CIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWF 314

Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
           H  +++ GF     + ++LI  Y   GQ+  +    NG ++ D+  W  ++SA  H    
Sbjct: 315 HAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCM 374

Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
            +   +F  ++    KP+   + ++L+ CA  GA    K  H ++ + G   +V + +A+
Sbjct: 375 DQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETAL 434

Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
           I+ YAKCGD+  AR  F+++    D+ ++NT++  ++ HG   EA+E+F +M+   ++P+
Sbjct: 435 INMYAKCGDVTIARSLFNEAMQ-RDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 493

Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
             TFVS+  ACSH GL++                     YGCLVD+L R G+L++A ++I
Sbjct: 494 DITFVSIFHACSHSGLMEH--------------------YGCLVDLLGRAGHLDEAHNII 533

Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           E MP +P+  ++ +LL+ C++H N  LGE A+ K+L L P+N    VL S
Sbjct: 534 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKS 583



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 210/421 (49%), Gaps = 2/421 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D   L   L       S  LG ++HG   K GF +D+F+ N L+ MY KCG       VF
Sbjct: 87  DNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVF 146

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D+M ER++VSWT ++   +++  F   L++  +M+  G   +  A+ S++ V  ++   +
Sbjct: 147 DQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMK 206

Query: 163 FGYSIHCFALK-IRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
            G ++H + ++ +  EK    +  ++++ Y K G +A+A+R+F  +S   V  W  MI G
Sbjct: 207 SGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAG 266

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
                   E     + ML E +  ++ T ++ +  C  V   D+G+  H  ++R+    S
Sbjct: 267 CIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMS 326

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           +++V ALIDMY K   + YA  +F  +  KDV  W+ L   ++      Q  +LF + + 
Sbjct: 327 LALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLN 386

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +  +PN+VT   LL  C +   LDLG          G   +  + ++LI M+ +CG V +
Sbjct: 387 NDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTI 446

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A S+F+    ++I  WN +++G+  + C  + L+ F  +   GVE N  TF  +   C  
Sbjct: 447 ARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSH 506

Query: 461 S 461
           S
Sbjct: 507 S 507



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 210/455 (46%), Gaps = 3/455 (0%)

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCF 170
           ++ L++S+   N         Y+ M++N     + F + S++K C    + + G  +H F
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
           A K     + FV  +++N Y K G + +A  VF  +   DV  W  M+G Y       EA
Sbjct: 114 AQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEA 173

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS--EVECSISIVNALI 288
           L +V  M F G+ +     I+ +     + D   GR +HG I+R+  + +  +S+  ALI
Sbjct: 174 LRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALI 233

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           DMY K   +  A ++F+R++ + V+SW  +  G   +    + A  F++ +     PN +
Sbjct: 234 DMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEI 293

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           T   L+ +CG +  LDLG       L  GF     + ++LI M+ +CG V  A ++F+ V
Sbjct: 294 TLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGV 353

Query: 409 SYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVG 468
             K++  W+ L+S Y    C   V   F  +  + V+ N  T   ++  C  +    +  
Sbjct: 354 KKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
             H  I + G      + ++LI  Y   G +  +    N A + D+  W  MM+     G
Sbjct: 414 WTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHG 473

Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
              EA+ +F  +   G +P++    +I ++C+  G
Sbjct: 474 CGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 20/267 (7%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG   H ++++ GF   + L   LI MY KCG  G+   +F+ + ++++  W++++SA  
Sbjct: 310 LGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYA 369

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
                D    ++V+M  N   PN   + S++ +C   GA + G   H +  +  +E +  
Sbjct: 370 HVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVI 429

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  +++N YAK GDV  A  +F      D+  WN M+ G++  G G EAL + S M   G
Sbjct: 430 LETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHG 489

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           +  +  TF++    CS           H  ++             L+D+  ++  +D A 
Sbjct: 490 VEPNDITFVSIFHACS-----------HSGLMEH--------YGCLVDLLGRAGHLDEAH 530

Query: 302 KVFERMADK-DVISWNTLFGGFSENKN 327
            + E M  + + I W  L      +KN
Sbjct: 531 NIIENMPMRPNTIIWGALLAACKLHKN 557



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 13/205 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +   LSL     +  LG   H +I + G   D+ L+  LI MY+KCG      
Sbjct: 389 VKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIAR 448

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F+E  +R++  W  +++    +G     L+++ +M+++G  PN+    S+   C   G
Sbjct: 449 SLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSG 508

Query: 160 ASE--------FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
             E         G + H       IE  P    +++      G + AA ++  +++  +V
Sbjct: 509 LMEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTII-----WGALLAACKLHKNLALGEV 563

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSS 236
                +     +CGY     N+ +S
Sbjct: 564 AARKILELDPQNCGYSVLKSNIYAS 588


>gi|414864687|tpg|DAA43244.1| TPA: hypothetical protein ZEAMMB73_488594 [Zea mays]
          Length = 658

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 150/520 (28%), Positives = 261/520 (50%), Gaps = 4/520 (0%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
           G +  A   F  +SS      N MI G+A  G   +AL    +ML      D++TF   +
Sbjct: 70  GRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAYRAMLAASARPDRFTFPVVV 129

Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
           + C+       GR  H  +I+  +   +   N+L+ +Y K   +  A +VF+ M  +D++
Sbjct: 130 KCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFDGMPARDIV 189

Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL--LRQCGKLLDLDLGLQLQC 371
           SWNT+  G+  N   G  A    + +    R  H    ++  L  C     L  G ++  
Sbjct: 190 SWNTMVDGYVSNGM-GALALACFRDMNDALRVRHDGVGVIAALAACCLESALAQGREIHG 248

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
            A+  G   +  V +SL+ M+C+CG V  A +VF  +  + + TWN L+ GY  N    D
Sbjct: 249 YAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYALNERPVD 308

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
               F  +   G +V   T   ++  C ++E+      +H  +++  F     + ++L++
Sbjct: 309 AFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALLE 368

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y N G++++S +         + +W  M++A ++     EA+ +F  L+     PD + 
Sbjct: 369 MYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPDYFT 428

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           + T++ +   +G+ ++ + +H ++IKLG+     + +AV+  YA+CGDI  +R  FD+  
Sbjct: 429 MTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDK-M 487

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
              DVI +NT+I+ YA HG    A+E+FD+MK   ++P+++TFVSV++ACS  GL  +G 
Sbjct: 488 PGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTACSVSGLETEGW 547

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
             F SM  +YGM P  + YGC+ D+L R       K V+ 
Sbjct: 548 KEFNSMQHEYGMVPQIEHYGCMTDLLGRADPFASGKTVLP 587



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 196/401 (48%), Gaps = 3/401 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   H  ++KLG   D++  N+L+A+Y+K G  G   RVFD M  R++VSW  +V   + 
Sbjct: 141 GRAAHAAVIKLGLGADMYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVS 200

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVG--SVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           NG   + L  + DM  +        VG  + +  C    A   G  IH +A++  +E++ 
Sbjct: 201 NGMGALALACFRDMN-DALRVRHDGVGVIAALAACCLESALAQGREIHGYAIRHGLEQDV 259

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            VG S+++ Y K G+V  AE VF ++    V  WN +IGGYA      +A +    M  E
Sbjct: 260 KVGTSLVDMYCKCGNVLYAENVFATMLLRTVVTWNCLIGGYALNERPVDAFDCFMQMRAE 319

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G  ++  T IN L  C        GR +H  ++R      + +  AL++MY     ++ +
Sbjct: 320 GFQVEAVTAINLLAACGQTESSLYGRSVHAYVVRRHFLPHVVLETALLEMYGNVGKVESS 379

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+F +M +K V++WN +   +   +   +  +LF + +     P++ T + ++     L
Sbjct: 380 EKIFGQMTEKTVVTWNNMIAAYIYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLL 439

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L    Q+    +  G+ D   + +++++M+ RCG +  +  +FD +  K++ +WN ++
Sbjct: 440 GSLRQCRQMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTII 499

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
            GY  +      L+ F  +  +G+E N  TF  V+  C  S
Sbjct: 500 IGYAIHGQGKTALEMFDEMKCNGIEPNESTFVSVLTACSVS 540



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 192/436 (44%), Gaps = 1/436 (0%)

Query: 129 GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLN 188
            L  Y  M      P+ F    V+K C   GA   G + H   +K+ +  + +   S++ 
Sbjct: 106 ALAAYRAMLAASARPDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVA 165

Query: 189 FYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITMDKY 247
            YAKLG V  AERVF  + + D+  WN M+ GY   G G  AL     M     +  D  
Sbjct: 166 LYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGV 225

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
             I AL  C L +    GR+IHG  IR  +E  + +  +L+DMY K   + YA  VF  M
Sbjct: 226 GVIAALAACCLESALAQGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATM 285

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
             + V++WN L GG++ N+ P      F +    G +   VT   LL  CG+      G 
Sbjct: 286 LLRTVVTWNCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGR 345

Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
            +    +   FL    + ++L+ M+   G VE +  +F  ++ K + TWN +++ Y +  
Sbjct: 346 SVHAYVVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMIAAYIYME 405

Query: 428 CDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICS 487
              + +  F  +    +  +  T   VV       + +   Q+H  IIK G+     I +
Sbjct: 406 MYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYGDSTLIMN 465

Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
           +++  Y   G +  S E  +     D+ SW  ++      G    A+ +F  +   G +P
Sbjct: 466 AVMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKTALEMFDEMKCNGIEP 525

Query: 548 DEYILGTILNSCAAIG 563
           +E    ++L +C+  G
Sbjct: 526 NESTFVSVLTACSVSG 541



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/460 (20%), Positives = 190/460 (41%), Gaps = 4/460 (0%)

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
            V  S     +L+  +I +  MD A   F  ++       N +  GF++   P    + +
Sbjct: 51  PVPSSAPRPKSLVLSHIAAGRMDEAADAFAGVSSPGAFLHNVMIRGFADAGLPLDALAAY 110

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
              + + +RP+  TF ++++ C +   L  G       +  G   +    +SL+ ++ + 
Sbjct: 111 RAMLAASARPDRFTFPVVVKCCTRAGALGEGRAAHAAVIKLGLGADMYTANSLVALYAKL 170

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYV 454
           G V  A  VFD +  ++I +WN ++ GY  N   A  L  F ++ ++  V  +G      
Sbjct: 171 GLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFRDMNDALRVRHDGVGVIAA 230

Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
           +  CC         +IHG  I+ G      + +SL+  Y   G +  +           +
Sbjct: 231 LAACCLESALAQGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVLYAENVFATMLLRTV 290

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            +W  ++          +A   F  +   G + +      +L +C    +    +S+H +
Sbjct: 291 VTWNCLIGGYALNERPVDAFDCFMQMRAEGFQVEAVTAINLLAACGQTESSLYGRSVHAY 350

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
           V++  F   V + +A+++ Y   G ++ +   F Q      V+ +N +I AY +  +  E
Sbjct: 351 VVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQ-MTEKTVVTWNNMIAAYIYMEMYQE 409

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLV 694
           A+ +F ++    L P   T  +V+ A    G + + C    S   + G   S      ++
Sbjct: 410 AIALFLELLNQPLYPDYFTMTTVVPAFVLLGSL-RQCRQMHSYIIKLGYGDSTLIMNAVM 468

Query: 695 DMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
            M +R G +  ++ + + MP +     + +++ G  IHG 
Sbjct: 469 HMYARCGDIVASREIFDKMPGK-DVISWNTIIIGYAIHGQ 507



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 103/201 (51%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +S + G  VH ++V+  F   + L+  L+ MY   G      ++F +M E+ +V+W  ++
Sbjct: 339 ESSLYGRSVHAYVVRRHFLPHVVLETALLEMYGNVGKVESSEKIFGQMTEKTVVTWNNMI 398

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +A I    +   + +++++      P+ F + +V+   V +G+      +H + +K+   
Sbjct: 399 AAYIYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSLRQCRQMHSYIIKLGYG 458

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            +  +  +V++ YA+ GD+ A+  +F  +   DV  WN +I GYA  G G  AL +   M
Sbjct: 459 DSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKTALEMFDEM 518

Query: 238 LFEGITMDKYTFINALQGCSL 258
              GI  ++ TF++ L  CS+
Sbjct: 519 KCNGIEPNESTFVSVLTACSV 539



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 63/118 (53%), Gaps = 5/118 (4%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           Q+H +I+KLG+ +   + N ++ MY++CG       +FD+M  ++++SW  I+     +G
Sbjct: 447 QMHSYIIKLGYGDSTLIMNAVMHMYARCGDIVASREIFDKMPGKDVISWNTIIIGYAIHG 506

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV-----SMGASEFGYSIHCFALKIRIE 177
           +    L+M+ +MK NG  PNE    SV+  C      + G  EF    H + +  +IE
Sbjct: 507 QGKTALEMFDEMKCNGIEPNESTFVSVLTACSVSGLETEGWKEFNSMQHEYGMVPQIE 564


>gi|302819410|ref|XP_002991375.1| hypothetical protein SELMODRAFT_133508 [Selaginella moellendorffii]
 gi|300140768|gb|EFJ07487.1| hypothetical protein SELMODRAFT_133508 [Selaginella moellendorffii]
          Length = 652

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 163/610 (26%), Positives = 301/610 (49%), Gaps = 22/610 (3%)

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G  +H  A ++ ++++  +  ++++ Y + G +  A +VF ++   DV  W AMI  YA 
Sbjct: 30  GKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMITAYAR 89

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI-IRSEVECSIS 282
            G   + + ++ +ML +G+  +K T + AL     V +    R IH ++ + S +E  +S
Sbjct: 90  NGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVE---SRSIHRILAVESGLEWDVS 146

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  A++ MY +   ++ A   FE+M  K+V++W+    G  E   P     +F   +L G
Sbjct: 147 VGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLLEG 206

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD------EENVT--SSLIYMFCR 394
           +  + +T   LL  C    D+ +G ++    L   FL       E NV   ++L+ ++ +
Sbjct: 207 AAVDKITLVTLLDLCSSCEDVVVGGEI----LPDDFLGRFGEEIETNVIVGTALVNLYAK 262

Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD--VLKTFCNIWESGVEVNGCTFF 452
            G +E A  VF  +  +N+ TW  L++ +C  CCD D   L+ F  +   GV  N     
Sbjct: 263 AGDLERACGVFSRMKNRNVVTWTALITAHC--CCDRDEQALEIFRQMQLEGVRPNAVPNA 320

Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
             +              +HG ++ +G +    + ++L+  Y      ++        E  
Sbjct: 321 VTLANVLYVLGLDRGKLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEEH 380

Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
              SW AM++       N EA+ ++  +   G + D     TIL +C+++ A    +SIH
Sbjct: 381 TTVSWTAMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALPEVRSIH 440

Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV--YNTLIMAYAHHG 630
             V + GF+    V++ ++ AY KCG ++ A   F  S ++N +    ++++I   A HG
Sbjct: 441 SCVHESGFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIATSARHG 500

Query: 631 LVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCY 690
             +EA+ IF +M+    +    T + V++ACSH G+  K    F SM   Y +  + D  
Sbjct: 501 CAAEAVAIFHRMQQEGARADDVTLLCVLAACSHGGMTAKAVEFFVSMIHDYKVGRTGDHC 560

Query: 691 GCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLP 750
            C+ D+L RNG LEDA+ +I  MPF+ + +V+ +LL  CR HG+    + AS+++  + P
Sbjct: 561 SCMADLLGRNGRLEDAEELIRKMPFEAAASVWMTLLGACRTHGDLPRAKEASDQVSGINP 620

Query: 751 KNDAAHVLLS 760
           ++  ++++LS
Sbjct: 621 EHAQSYIVLS 630



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/611 (24%), Positives = 279/611 (45%), Gaps = 30/611 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H    +LG   D  L  N++ MY +CG      +VFD + +R+++ WT +++A  +
Sbjct: 30  GKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFDNLHDRDVILWTAMITAYAR 89

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-CFALKIRIEKNPF 181
           NG+F  G+ +   M  +G  PN+  + + +     +  S    SIH   A++  +E +  
Sbjct: 90  NGDFQQGMALLRAMLLDGVAPNKITILAALGTTDCVVESR---SIHRILAVESGLEWDVS 146

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG ++++ Y + G +  A   F  +   +V  W+  + G          L +   ML EG
Sbjct: 147 VGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVTWSVAMAGCKELHRPELGLEIFRGMLLEG 206

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI--HGLIIR--SEVECSISIVNALIDMYIKSSGM 297
             +DK T +  L  CS   D  +G +I     + R   E+E ++ +  AL+++Y K+  +
Sbjct: 207 AAVDKITLVTLLDLCSSCEDVVVGGEILPDDFLGRFGEEIETNVIVGTALVNLYAKAGDL 266

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           + A  VF RM +++V++W  L           Q   +F +  L G RPN V  ++ L   
Sbjct: 267 ERACGVFSRMKNRNVVTWTALITAHCCCDRDEQALEIFRQMQLEGVRPNAVPNAVTLANV 326

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             +L LD G  L  + +  G   +  V ++L+ ++ R    E  H VF  +      +W 
Sbjct: 327 LYVLGLDRGKLLHGVMVDSGVAVDVGVGTALMNLYARSKLPEHGHRVFLEMEEHTTVSWT 386

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++ +  N  +A+ L  +  +   G   +  TF  ++  C        V  IH  + ++
Sbjct: 387 AMIACFAQNSRNAEALGLYRRMHLEGHRADAKTFTTILLACSSLIALPEVRSIHSCVHES 446

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           GF     + ++L+ +Y   G L+++   F  S+    L+ + W +M++     G   EAV
Sbjct: 447 GFHINDAVSTTLMSAYGKCGTLEDASRIFLHSSSTNPLNTSRWSSMIATSARHGCAAEAV 506

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-----IKLGFNTEVYVASA 589
            IFH + + G + D+  L  +L +C+  G     K++  FV      K+G   +    S 
Sbjct: 507 AIFHRMQQEGARADDVTLLCVLAACSHGG--MTAKAVEFFVSMIHDYKVGRTGD--HCSC 562

Query: 590 VIDAYAKCGDIKGA-----RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           + D   + G ++ A     +M F+ + +     V+ TL+ A   HG +  A E  D++  
Sbjct: 563 MADLLGRNGRLEDAEELIRKMPFEAAAS-----VWMTLLGACRTHGDLPRAKEASDQVSG 617

Query: 645 ANLQPSQATFV 655
            N + +Q+  V
Sbjct: 618 INPEHAQSYIV 628



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
           A  + K +H    +LG + +  +A  ++  Y +CG I GAR  FD + +  DVI++  +I
Sbjct: 26  ALAQGKFLHSQAARLGLDRDELLAKNIVHMYLRCGSIPGARQVFD-NLHDRDVILWTAMI 84

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            AYA +G   + M +   M L  + P++   +++++A      V +   + + +  + G+
Sbjct: 85  TAYARNGDFQQGMALLRAMLLDGVAPNK---ITILAALGTTDCVVESRSIHRILAVESGL 141

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           +        +V M  R G LEDA    E MP +   T +   ++GC+     ELG
Sbjct: 142 EWDVSVGTAIVSMYCRCGSLEDAIDHFEQMPVKNVVT-WSVAMAGCKELHRPELG 195


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 275/541 (50%), Gaps = 23/541 (4%)

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
           +ML EG ++    ++  L  C         + +HG ++++     I +  +L+++Y++  
Sbjct: 68  AMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCG 127

Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
               A  +F+ M +K+V++W  L  G++ N  P     +F + +  G  P+  T   +L 
Sbjct: 128 NSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLS 187

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C    ++DLG Q+    +  G     ++ +SL  ++ + G +E     F  +  KN+ T
Sbjct: 188 ACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVIT 247

Query: 416 WNELLSGYCFNCCDADV------LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
           W  ++S      C  D       L  F ++ +  V  N  T   V+  C  S +  +  Q
Sbjct: 248 WTTMISA-----CAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQ 302

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH--- 526
           + G   K G ++   + +S +  Y+  G+ + +       E   + +W AM+S       
Sbjct: 303 VQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMD 362

Query: 527 --------QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
                   +    +A+ IF  LV +  KPD +   +IL+ C+ + A ++ + IH   IK 
Sbjct: 363 SAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKT 422

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GF ++V V SA+++ Y KCG I+ A  AF +   +  ++ + ++I  Y+ HG   +A+++
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEYATKAFVE-MPTRTLVTWTSMISGYSQHGRPHDAIQL 481

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           F+ M LA  +P++ TFVS++SACS+ GLV++    F  M ++Y ++P  D YGC++DM  
Sbjct: 482 FEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFV 541

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L+DA   I+   F+P+  ++ SL++GCR HGN EL  +A+++LL L PK    +VL
Sbjct: 542 RLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVL 601

Query: 759 L 759
           L
Sbjct: 602 L 602



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 247/523 (47%), Gaps = 31/523 (5%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HGH+VK G   DIF+  +L+ +Y +CG       +FDEM E+N+V+WT +++    N +
Sbjct: 100 LHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQ 159

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
             + L+++V+M   G  P+++ +G ++  CV+    + G  +H + +K        +G S
Sbjct: 160 PVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNS 219

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-GYGFEALNVVSSMLFEGITM 244
           +   Y K G++ +  R F  I   +V  W  MI   A    Y    LN+   ML   +  
Sbjct: 220 LCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMP 279

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +++T  + +  C    D ++G+Q+ G   +     ++ + N+ + +Y++    + A ++F
Sbjct: 280 NEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLF 339

Query: 305 ERMADKDVISWNTLFGGFSENKNPG-----------QTASLFHKFILSGSRPNHVTFSIL 353
           E M D  VI+WN +  GF++  +             Q   +F   + S  +P+  TFS +
Sbjct: 340 EEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSI 399

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C  ++ L+ G Q+    +  GFL +  V S+L+ M+ +CG +E A   F  +  + +
Sbjct: 400 LSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTL 459

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW  ++SGY  +    D ++ F ++  +G + N  TF  ++  C  +      G +  A
Sbjct: 460 VTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYA------GLVEEA 513

Query: 474 IIKTGFSSCGYICSSLIKSY-------VNFGQLDNSFEF--SNGAERLDMASWGAMMSAL 524
           +         Y    L+  Y       V  G+LD+++ F    G E  + A W ++++  
Sbjct: 514 MRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEP-NEAIWSSLVAGC 572

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDE-YILGTILNSCAAIGAYQ 566
              G+   A      L+E   K  E Y+L  +LN   + G ++
Sbjct: 573 RSHGNMELAFYAADRLLELKPKVVETYVL--LLNMYISTGRWR 613



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 248/561 (44%), Gaps = 42/561 (7%)

Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKV-----CVSMGASEFGYSIHCFAL 172
           +  ++NG  +   +     +    +    +V S M V     C+  G+     ++H   +
Sbjct: 46  TQVLENGRLEAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMV 105

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           K     + FV  S++N Y + G+   A  +F  +   +V  W A+I GY        AL 
Sbjct: 106 KTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALE 165

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           V   ML  G     YT    L  C    + D+G+Q+HG  I+       SI N+L  +Y 
Sbjct: 166 VFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYT 225

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA-SLFHKFILSGSRPNHVTFS 351
           KS  ++   + F+R+ DK+VI+W T+    +E++N  +   +LF   +     PN  T +
Sbjct: 226 KSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLT 285

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            ++  CG  LD++LG Q+Q      G      V +S +Y++ R G  E A  +F+ +   
Sbjct: 286 SVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDN 345

Query: 412 NITTWNELLSGYC--FNCCDADV---------LKTFCNIWESGVEVNGCTFFYVVETCCR 460
           ++ TWN ++SG+    +    D+         LK F ++  S ++ +  TF  ++  C  
Sbjct: 346 SVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCST 405

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +   QIH   IKTGF S   + S+L+  Y   G ++ + +         + +W +M
Sbjct: 406 MMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSM 465

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG----------AYQRTKS 570
           +S     G  H+A+ +F  ++ AG KP+E    ++L++C+  G            Q    
Sbjct: 466 ISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYH 525

Query: 571 IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF--DQSFNSNDVIVYNTLIMAYAH 628
           I P +   G          +ID + + G +  A  AF   + F  N+ I +++L+     
Sbjct: 526 IEPLMDHYG---------CMIDMFVRLGRLDDA-YAFIKRKGFEPNEAI-WSSLVAGCRS 574

Query: 629 HGLVSEAMEIFDKMKLANLQP 649
           HG +  A    D  +L  L+P
Sbjct: 575 HGNMELAFYAAD--RLLELKP 593



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 189/380 (49%), Gaps = 24/380 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG+ +K G  +   + N+L  +Y+K G    G+R F  + ++N+++WT ++SA  
Sbjct: 197 LGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACA 256

Query: 122 QNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++  + ++GL +++DM     MPNEF + SVM +C +      G  +  F  KI    N 
Sbjct: 257 EDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNL 316

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC-----------GYGFE 229
            V  S +  Y + G+   A R+F  +  + V  WNAMI G+A               GF+
Sbjct: 317 PVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQ 376

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +   ++   +  D +TF + L  CS +   + G QIH   I++     + + +AL++
Sbjct: 377 ALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVN 436

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++YA K F  M  + +++W ++  G+S++  P     LF   IL+G++PN +T
Sbjct: 437 MYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEIT 496

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS------SLIYMFCRCGAVEMAHS 403
           F  LL  C        GL  + +       +E ++         +I MF R G ++ A++
Sbjct: 497 FVSLLSACSY-----AGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYA 551

Query: 404 VFDNVSYK-NITTWNELLSG 422
                 ++ N   W+ L++G
Sbjct: 552 FIKRKGFEPNEAIWSSLVAG 571



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 132/279 (47%), Gaps = 13/279 (4%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS--A 119
           LG QV G   K+G   ++ ++N+ + +Y + G     +R+F+EM + ++++W  ++S  A
Sbjct: 299 LGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFA 358

Query: 120 AIQNGEFD---------MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            I +   D           LK++ D+  +   P+ F   S++ VC +M A E G  IH  
Sbjct: 359 QIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQ 418

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
            +K     +  V  +++N Y K G +  A + F  + +  +  W +MI GY+  G   +A
Sbjct: 419 TIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDA 478

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALID 289
           + +   M+  G   ++ TF++ L  CS     +   +   ++     +E  +     +ID
Sbjct: 479 IQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMID 538

Query: 290 MYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
           M+++   +D A+   +R   + +   W++L  G   + N
Sbjct: 539 MFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGN 577



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 64/125 (51%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ D    +  LS+   + +   G Q+H   +K GF +D+ + + L+ MY+KCG   +
Sbjct: 387 SAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEY 446

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
             + F EM  R LV+WT ++S   Q+G     ++++ DM   G  PNE    S++  C  
Sbjct: 447 ATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSY 506

Query: 158 MGASE 162
            G  E
Sbjct: 507 AGLVE 511


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 147/508 (28%), Positives = 249/508 (49%), Gaps = 34/508 (6%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS- 343
           NAL+     +  +D    +F  MA +D +S+N +  GFS      +   L+H  + +GS 
Sbjct: 76  NALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSS 135

Query: 344 -RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
            RP+ +T S ++     L D  LG Q  C  L  GF     V S L+ M+ + G +  A 
Sbjct: 136 VRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAK 195

Query: 403 SVFDNVSYKNIT-------------------------------TWNELLSGYCFNCCDAD 431
            VFD +  KN+                                TW  +++G+  N  ++ 
Sbjct: 196 RVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQ 255

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            L  F  +   G+ ++  TF  ++  C      +   QIH  II+T +    ++ S+L+ 
Sbjct: 256 ALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVD 315

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y     +  +          ++ SW A++      G + EAV +F  +   G  PD++ 
Sbjct: 316 MYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFT 375

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           LG++++SCA + + +     H   +  G    + V++A++  Y KCG I+ A   FD+  
Sbjct: 376 LGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEML 435

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
             +D + +  L+  YA  G   E +++F+KM   +++P   TF+ V+SACS  G V+KGC
Sbjct: 436 -FHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGC 494

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
             F SM   +G+ P  D Y C++D+ SR+G L++A+  I+ MP  P    + +LLS CR+
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRL 554

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G+ E+G+WA+E LL + P+N A++VLL
Sbjct: 555 RGDMEIGQWAAENLLEIDPQNPASYVLL 582



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 228/511 (44%), Gaps = 36/511 (7%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           ++F  N L++  +          +F  MA+R+ VS+  +++     G     +++Y  + 
Sbjct: 71  NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130

Query: 138 TNG--FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGD 195
             G    P+   + +++    ++G    G   HC  L++    N FVG  ++  YAK+G 
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190

Query: 196 VAAAERVF------------------------------YSISSD-DVGCWNAMIGGYAHC 224
           +  A+RVF                              + + +D D   W  M+ G+   
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G   +ALN    M F+GI +D+YTF + L  C  ++  + G+QIH  IIR+  + ++ + 
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVG 310

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           +AL+DMY K   +  A   F RM+ K++ISW  L  G+ +N    +   +F +    G  
Sbjct: 311 SALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGID 370

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+  T   ++  C  L  L+ G Q  CLAL  G +    V+++L+ ++ +CG++E AH +
Sbjct: 371 PDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRL 430

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE-N 463
           FD + + +  +W  L++GY       + +  F  +    V+ +G TF  V+  C R+   
Sbjct: 431 FDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFV 490

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMS 522
           ++     H      G        + +I  Y   G+L  + EF        D   WG ++S
Sbjct: 491 EKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550

Query: 523 ALVHQGHNHEAVTIFHSLVEAG-EKPDEYIL 552
           A   +G          +L+E   + P  Y+L
Sbjct: 551 ACRLRGDMEIGQWAAENLLEIDPQNPASYVL 581



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 195/418 (46%), Gaps = 33/418 (7%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S +R   I ++  +  +  L  R LG Q H  I++LGF  + F+ + L+ MY+K G  G 
Sbjct: 134 SSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGD 193

Query: 98  GLRVFDEM-------------------------------AERNLVSWTLIVSAAIQNGEF 126
             RVFDEM                                +R+ ++WT +V+   QNG  
Sbjct: 194 AKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLE 253

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSV 186
              L  +  M+  G   +++  GS++  C ++ A E G  IH + ++   + N FVG ++
Sbjct: 254 SQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSAL 313

Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
           ++ Y+K   +  AE  F  +S  ++  W A+I GY   G   EA+ V S M  +GI  D 
Sbjct: 314 VDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDD 373

Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
           +T  + +  C+ +A  + G Q H L + S +   I++ NAL+ +Y K   ++ A ++F+ 
Sbjct: 374 FTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDE 433

Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
           M   D +SW  L  G+++     +T  LF K +    +P+ VTF  +L  C +   ++ G
Sbjct: 434 MLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKG 493

Query: 367 LQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTWNELLSG 422
                 +    G +  ++  + +I ++ R G ++ A      +  + +   W  LLS 
Sbjct: 494 CSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 122/524 (23%), Positives = 226/524 (43%), Gaps = 42/524 (8%)

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG--ITMDKYTFINALQGCS 257
           + +F S++  D   +NA+I G++  G    A+ +  ++L  G  +   + T    +   S
Sbjct: 92  DSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAAS 151

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS----------------------- 294
            + D  +GRQ H  I+R     +  + + L+ MY K                        
Sbjct: 152 ALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNT 211

Query: 295 --SGM------DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
             +G+      + A ++FE M D+D I+W T+  GF++N    Q  + F +    G   +
Sbjct: 212 MITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAID 271

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             TF  +L  CG L  L+ G Q+    +   + D   V S+L+ M+ +C +++ A + F 
Sbjct: 272 QYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFR 331

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +S KNI +W  L+ GY  N C  + ++ F  +   G++ +  T   V+ +C    + + 
Sbjct: 332 RMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEE 391

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             Q H   + +G      + ++L+  Y   G ++++    +     D  SW A+++    
Sbjct: 392 GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQ 451

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKS-IHPFVIKLGFNTEVY 585
            G   E + +F  ++    KPD      +L++C+  G  ++  S  H      G      
Sbjct: 452 FGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDD 511

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI--FDKMK 643
             + +ID Y++ G +K A     Q     D I + TL+ A    G     MEI  +    
Sbjct: 512 HYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG----DMEIGQWAAEN 567

Query: 644 LANLQP-SQATFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQP 685
           L  + P + A++V + S  + KG  ++   L + M D Q   +P
Sbjct: 568 LLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEP 611


>gi|449447755|ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 280/582 (48%), Gaps = 6/582 (1%)

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           YVD +  G   N     S++  CV   +  +   IH       +E N F+   +++ Y  
Sbjct: 104 YVDQQ--GIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTA 161

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG--FEALNVVSSMLFEGITMDKYTFI 250
            G +  A+++F   SS  V  WNA++ G    G       L+  + M   G+ ++ Y+F 
Sbjct: 162 CGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFA 221

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           N ++  +  + F  G + HGL+I++ +  S  +   L+DMY K   +  A ++F  + ++
Sbjct: 222 NIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITER 281

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV+ W ++  GF+ N+   +      + I  G RPN V  + +L   G++    LG ++ 
Sbjct: 282 DVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVH 341

Query: 371 CLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +    +  +  + S+LI M+C+CG +    +VF     +N   W  L+SGY  N   
Sbjct: 342 AYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRL 401

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              +++   + + G   +  T   ++  C +    +   +IH   +K  F     I SSL
Sbjct: 402 EQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSL 461

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G +D + +  NG E+ ++  W AM+ + +     HEA+ IF ++  +  +PD 
Sbjct: 462 MVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDT 521

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             +  IL  C+     +  K IH  V+K  F    +V++ ++  Y KCG +K A+M F+ 
Sbjct: 522 VTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFE- 580

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +      + +  +I AY   G   EA+++FD+M+   + P+  TF  V+S C   G VD+
Sbjct: 581 AIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDE 640

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
              +FK M  +Y ++PS + Y  ++ +L+R G LE+A+   E
Sbjct: 641 ALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRCKE 682



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 244/558 (43%), Gaps = 8/558 (1%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS     Q+H HI   G  N+ F++  L+ MY+ CG      ++FDE + +++  W  ++
Sbjct: 128 KSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALL 187

Query: 118 SAAIQNGEFDMG--LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
              +  G  D    L  Y +M+  G   N ++  +++K      A   G   H   +K  
Sbjct: 188 RGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNG 247

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  +  +G ++++ Y K G +  A ++F  I+  DV  W ++I G+AH     EAL    
Sbjct: 248 LIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTR 307

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKS 294
            M+ +GI  +       L     +    +G+++H  +I+++     I I +ALIDMY K 
Sbjct: 308 RMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKC 367

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +     VF    +++ I W  L  G++ N    Q           G RP+ VT + +L
Sbjct: 368 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATIL 427

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C +L  L  G ++   A+   FL   ++ SSL+ M+ +CG ++    +F+ +  +N+ 
Sbjct: 428 PVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVI 487

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W  ++  Y  N C  + +  F  +  S    +  T   ++  C   +  +M  +IHG +
Sbjct: 488 LWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQV 547

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K  F    ++ + L+K Y   G +  +             +W A++ A    G   EA+
Sbjct: 548 LKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAI 607

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV---IKLGFNTEVYVASAVI 591
            +F  +   G  P+ +    +L+ C   G       I   +    K+  + E Y  S VI
Sbjct: 608 DLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHY--SLVI 665

Query: 592 DAYAKCGDIKGARMAFDQ 609
               + G ++ AR   +Q
Sbjct: 666 AILTRFGRLEEARRCKEQ 683



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 179/384 (46%), Gaps = 3/384 (0%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYF 95
           D  +R + + L   L +   + +R LG +VH +++K   ++  IF+Q+ LI MY KCG  
Sbjct: 311 DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDI 370

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           G G  VF    ERN + WT ++S    NG  +  ++  + M+  GF P+   V +++ VC
Sbjct: 371 GSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVC 430

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             + A   G  IH +A+K     N  +  S++  Y+K G +    ++F  +   +V  W 
Sbjct: 431 AQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWT 490

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           AMI  Y       EA+++  +M       D  T    L  CS      +G++IHG +++ 
Sbjct: 491 AMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKR 550

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           + E    +   L+ +Y K   +  A  VFE +  K  ++W  +   + E+    +   LF
Sbjct: 551 KFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLF 610

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCR 394
            +    G  PNH TF ++L  C +   +D  L++ + +++       E   S +I +  R
Sbjct: 611 DRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAILTR 670

Query: 395 CGAVEMAHSVFDNVSYKN-ITTWN 417
            G +E A    + V  +  +T W 
Sbjct: 671 FGRLEEARRCKEQVETEGAVTFWK 694



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 227/506 (44%), Gaps = 12/506 (2%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL ++  +  +GI ++  TF + +  C         +QIH  I  + +E +  I   L+
Sbjct: 97  EALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLV 156

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGG--FSENKNPGQTASLFHKFILSGSRPN 346
            MY     ++ A K+F+  + K V  WN L  G   +  ++     S + +    G   N
Sbjct: 157 HMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELN 216

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             +F+ +++          GL+   L +  G +    + ++L+ M+ +CG +++A  +F 
Sbjct: 217 VYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFG 276

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            ++ +++  W  +++G+  N    + L+    + + G+  N      ++        +++
Sbjct: 277 EITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRL 336

Query: 467 VGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
             ++H  +IKT  +S   +I S+LI  Y   G + +       +   +   W A+MS   
Sbjct: 337 GQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYA 396

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G   +AV     + + G +PD   + TIL  CA + A +  K IH + +K  F   V 
Sbjct: 397 LNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVS 456

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + S+++  Y+KCG +      F+      +VI++  +I +Y  +    EA++IF  M+L+
Sbjct: 457 IVSSLMVMYSKCGVMDYTLKLFN-GMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLS 515

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY---GMQPSPDCYGCLVDMLSRNGY 702
             +P   T   ++  CS + ++  G    K +  Q      +P       LV +  + G 
Sbjct: 516 KHRPDTVTMSRILYICSEQKMLKMG----KEIHGQVLKRKFEPVHFVSAELVKLYGKCGA 571

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSG 728
           ++ AK V E +P +  P  + +++  
Sbjct: 572 VKMAKMVFEAIPVK-GPMTWTAIIEA 596


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 248/480 (51%), Gaps = 17/480 (3%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           + LI  +I     DYAF +  R       +W+          +   T  L+H+       
Sbjct: 68  STLIFSHITPHPNDYAFNIMLRAT---TTTWH----------DYPLTLHLYHQMKTLNIS 114

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN+ TF  +   C  L ++ +     C     G  ++ +  +S++ M+ RCG   +A  V
Sbjct: 115 PNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKV 174

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSEN 463
           FD ++ K++ +WN LLSGY       + ++ F  + E SG E +  +   V+  C    +
Sbjct: 175 FDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD 234

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            ++   + G +++ G     YI S+LI  Y   G+L +S    +G    D  +W A +SA
Sbjct: 235 LELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA 294

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               G   EA+++FHS+ E G  P++  L  +L++CA+IGA    K +  +    G   +
Sbjct: 295 YAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHD 354

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM- 642
           ++VA+A+ID YAKCG ++ A+  F+     ND   +N +I A A HG   EA+ +F++M 
Sbjct: 355 IFVATALIDMYAKCGSLESAQRVFNDMPRKNDA-SWNAMISALASHGKAKEALSLFERMS 413

Query: 643 -KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
            +  + +P+  TFVS++SAC H GLVD+G  LF  M + +G+ P  + Y C+VD+LSR G
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           +L +A  VIE MP +P      +L S C+   N ++GE   + LL L P N   +++ SK
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 233/533 (43%), Gaps = 50/533 (9%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           PIFL   LSL +   S     Q+H         + I   N+L++       F +   +F 
Sbjct: 20  PIFLL--LSLLKQCPSTKTLQQIHTQFT----IHSIHKPNHLLSQSISLKDFTYSTLIFS 73

Query: 104 EMAER-NLVSWTLIVSAAIQN-GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
            +    N  ++ +++ A      ++ + L +Y  MKT    PN F    V   C ++   
Sbjct: 74  HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
                 HC   K+ ++ +     S++  Y + G+   A +VF  I+  D+  WN+++ GY
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193

Query: 222 AHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           A  G+  EA+ V   +  E G   D+ + ++ L  C  + D ++GR + G ++   ++ +
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             I +ALI MY K   +  + ++F+ M  +D I+WN     +++N    +  SLFH    
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +G  PN VT + +L  C  +  LDLG Q+   A H G   +  V ++LI M+ +CG++E 
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG--VEVNGCTFFYVVETC 458
           A  VF+++  KN  +WN ++S    +    + L  F  + + G     N  TF  ++  C
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC 433

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                      +H  ++  G              Y  F  +   F      E      + 
Sbjct: 434 -----------VHAGLVDEG--------------YRLFDMMSTLFGLVPKIEH-----YS 463

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            M+  L   GH +EA  +   +    EKPD   LG + ++C      QR K++
Sbjct: 464 CMVDLLSRAGHLYEAWDVIEKM---PEKPDNVTLGALHSAC------QRKKNV 507



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 16/301 (5%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S    D + L   L     L    LG  V G +V+ G   + ++ + LI+MYSKCG   
Sbjct: 212 ESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELV 271

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R+FD M  R+ ++W   +SA  QNG  D  + ++  MK NG  PN+  + +V+  C 
Sbjct: 272 SSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACA 331

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S+GA + G  +  +A    ++ + FV  ++++ YAK G + +A+RVF  +   +   WNA
Sbjct: 332 SIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNA 391

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITM--DKYTFINALQGC---SLVAD----FDIGRQ 267
           MI   A  G   EAL++   M  EG +   +  TF++ L  C    LV +    FD+   
Sbjct: 392 MISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMST 451

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENK 326
           + GL+ +      I   + ++D+  ++  +  A+ V E+M +K D ++   L       K
Sbjct: 452 LFGLVPK------IEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKK 505

Query: 327 N 327
           N
Sbjct: 506 N 506


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 163/590 (27%), Positives = 290/590 (49%), Gaps = 6/590 (1%)

Query: 171 ALKIRIE---KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           ALK+  E   KN     ++++ Y K+GD+++A  +F ++    V  W  ++G YA   + 
Sbjct: 63  ALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHF 122

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI--SIVN 285
            EA  +   M       D  TF   L GC+     +   Q+H   ++   + ++  ++ N
Sbjct: 123 DEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCN 182

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
            L+  Y +   +D A  +FE + DKD +++NTL  G+ ++    +   LF K   SG +P
Sbjct: 183 VLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKP 242

Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +  TFS +L+    L D  LG QL  L++  GF  + +V + +++ + +   V    ++F
Sbjct: 243 SDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLF 302

Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
           + +   +  ++N ++S Y       + L  F  +   G +     F  ++       + Q
Sbjct: 303 NEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQ 362

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
           +  Q+H   I     S  ++ +SL+  Y      D +        +    SW A++S  V
Sbjct: 363 VGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYV 422

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
            +G +   + +F  +  A  + D+    T+L + A   +    K +H F+I+ G    V+
Sbjct: 423 QKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVF 482

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
             S ++D YAKCG IK A   F++  + N  + +N LI AYA +G    A+  F KM  +
Sbjct: 483 SGSGLVDMYAKCGSIKDAVQVFEEMPDRN-AVSWNALISAYADNGDGEAAIGAFTKMIQS 541

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
            LQP   + + V+ ACSH G V++G   F++M   YG+ P    Y C++D+L RNG   +
Sbjct: 542 GLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAE 601

Query: 706 AKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
           A+ +++ MPF+P   ++ S+L+ CRI+ N+ L E A+E+L  +    DAA
Sbjct: 602 AEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAA 651



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 148/637 (23%), Positives = 276/637 (43%), Gaps = 24/637 (3%)

Query: 20  ATRK---RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT 76
           ATR+   RI +   N   C  +F  +D   L +   +S  LK  V     H + V     
Sbjct: 27  ATRRVDARIIKTGFNTDTCRSNFTVED---LLRRGQVSAALK--VYDEMPHKNTVS---- 77

Query: 77  NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
                 N +I+ Y K G       +FD M +R +V+WT+++     N  FD   K++  M
Sbjct: 78  -----TNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG-CSV-LNFYAKLG 194
             +  +P+     +++  C           +H FA+K+  + N F+  C+V L  Y ++ 
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
            +  A  +F  I   D   +N +I GY   G   EA+++   M   G     +TF   L+
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLK 252

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
               + DF +G+Q+HGL + +      S+ N ++  Y K   +     +F  M + D +S
Sbjct: 253 AVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVS 312

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           +N +   +S+ +   ++ +LF +    G    +  F+ +L     L  L +G Q+ C A+
Sbjct: 313 YNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAI 372

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
                   +V +SL+ M+ +C   + A  +F ++S ++  +W  L+SGY         LK
Sbjct: 373 VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLK 432

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            F  +  + +  +  TF  V++      +  +  Q+H  II++G     +  S L+  Y 
Sbjct: 433 LFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 492

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
             G + ++ +        +  SW A++SA    G    A+  F  ++++G +PD   +  
Sbjct: 493 KCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILG 552

Query: 555 ILNSCAAIG-AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           +L +C+  G   Q T+         G   +    + ++D   + G    A    D+    
Sbjct: 553 VLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 612

Query: 614 NDVIVYNTLIMA---YAHHGLVSEAME-IFDKMKLAN 646
            D I++++++ A   Y +  L   A E +F   KL +
Sbjct: 613 PDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRD 649



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/527 (22%), Positives = 233/527 (44%), Gaps = 38/527 (7%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE- 324
           R++   II++         N  ++  ++   +  A KV++ M  K+ +S NT+  G+ + 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 325 ----------NKNPGQTA--------------------SLFHKFILSGSRPNHVTFSILL 354
                     +  P +T                      LF +   S + P++VTF+ LL
Sbjct: 89  GDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLL 148

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEE---NVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
             C   +  +   Q+   A+  GF D      V + L+  +C    +++A  +F+ +  K
Sbjct: 149 PGCNDAVPQNAVGQVHAFAVKLGF-DTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDK 207

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
           +  T+N L++GY  +    + +  F  + +SG + +  TF  V++      +  +  Q+H
Sbjct: 208 DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLH 267

Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
           G  + TGFS    + + ++  Y    ++  +    N    LD  S+  ++S+        
Sbjct: 268 GLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYE 327

Query: 532 EAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           E++ +F  +   G     +   T+L+  A + + Q  + +H   I    ++ ++V ++++
Sbjct: 328 ESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLV 387

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
           D YAKC     A + F +S +    + +  LI  Y   GL    +++F KM+ ANL+  Q
Sbjct: 388 DMYAKCEMFDEAELIF-KSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQ 446

Query: 652 ATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
           +TF +V+ A +    +  G  L   +     ++      G LVDM ++ G ++DA  V E
Sbjct: 447 STFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSG-LVDMYAKCGSIKDAVQVFE 505

Query: 712 IMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
            MP + +   + +L+S    +G+ E    A  K++    + D+  +L
Sbjct: 506 EMPDR-NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSIL 551



 Score = 40.0 bits (92), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
           T+ +   +IK GFNT+   ++  ++   + G +  A   +D+  + N V   NT+I  Y 
Sbjct: 28  TRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVST-NTMISGYV 86

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
             G +S A  +FD M       +  T+  +M   +     D+   LF+ M
Sbjct: 87  KMGDLSSARHLFDAMP----DRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 279/577 (48%), Gaps = 4/577 (0%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE--GIT 243
           +L+ YA LGD+A+A  V       D   +  M+G     G   +A+ +   M        
Sbjct: 61  LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120

Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
                   AL+ C   ADF  GR++H  ++++       ++N+L+DMY K+  ++ A KV
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADGF-VMNSLVDMYAKAGDLENARKV 179

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           F+R+ +++V+SW ++  G  +N    +   LF++       P+  T   +L  C  L  L
Sbjct: 180 FDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGL 239

Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
             G  +    +  G      +++SL+ M+ +C  VE A  VFD + + +I  W  ++ GY
Sbjct: 240 HQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGY 299

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             N    D L+ F +     +  N  T   V+    +  +  +   +H   +K G     
Sbjct: 300 TQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESD 359

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++L+  Y     L  +          D+ +W +MM+     G  +E++ +F+ +   
Sbjct: 360 VVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQ 419

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G  PD   +   L++C  +      K  H + IK  F + +YV +A+++ Y+KC D+  A
Sbjct: 420 GISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSA 479

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +  F+   + N V  ++ +I  Y   G  + ++++F++M   N+ P++  F S++SACSH
Sbjct: 480 QRVFNDMTDRNSV-TWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSH 538

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
            G+V  G   F SM   + + PS   Y C+VD+++R G LE+A   I+ MP +   +V+ 
Sbjct: 539 TGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWG 598

Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           S L GC++H   E GE A +K+  L P+    +VL+S
Sbjct: 599 SFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMS 635



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 250/526 (47%), Gaps = 16/526 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++H  +VK G   D F+ N+L+ MY+K G      +VFD + ERN+VSWT ++S +IQ
Sbjct: 142 GRRLHCDVVKAGGA-DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQ 200

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           NG  + GL ++ +M+ +   P+E+ + SV+  C  +G    G  IH   +K  +  N F+
Sbjct: 201 NGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFI 260

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+L+ YAK   V  A RVF  +   D+  W AMI GY       +AL +     F  I
Sbjct: 261 SASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSI 320

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  T    +   + +    +GR +H + ++     S  + NAL+DMY K   +  A  
Sbjct: 321 VPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANS 380

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F R+  KDV++WN++  G+SEN    ++  LF++  + G  P+ ++    L  C  L D
Sbjct: 381 IFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLAD 440

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L +G      A+   F+    V ++L+ ++ +C  +  A  VF++++ +N  TW+ ++ G
Sbjct: 441 LHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGG 500

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--- 479
           Y      A  +  F  + +  +  N   F  ++  C  +      G+ +   +   F   
Sbjct: 501 YGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHT-GMVTAGKEYFDSMARHFNIT 559

Query: 480 -SSCGYICSSLIKSYVNFGQLDNSFEF-SNGAERLDMASWGAMMSALVHQGH---NHEAV 534
            S   Y C  ++      G L+ + EF  N   +  ++ WG+ +             EA+
Sbjct: 560 PSMKHYAC--MVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAI 617

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
               +L    E PD Y+L  + N   + G + ++++I  ++ + G 
Sbjct: 618 KKMAAL--HPETPDFYVL--MSNLYTSYGRWDKSQTIRRWMQEQGL 659



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/617 (22%), Positives = 276/617 (44%), Gaps = 12/617 (1%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           I  +  L++ Y+  G       V D     +  ++ +++   +  G     + ++ DM+ 
Sbjct: 55  IRARTKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRR 114

Query: 139 N--GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
                   +  +   +K CV      +G  +HC  +K     + FV  S+++ YAK GD+
Sbjct: 115 RCPAAAQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDL 173

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
             A +VF  +   +V  W +M+ G    G   E L + + M  + +   +YT ++ L  C
Sbjct: 174 ENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAAC 233

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           +++     GR IHG +I+  +  +  I  +L+DMY K   ++ A +VF+ +   D++ W 
Sbjct: 234 AMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWT 293

Query: 317 TLFGGFSENKNPGQTASLF-HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
            +  G+++NK P     LF HK  +S   PN VT + ++    +L  L LG  +  + + 
Sbjct: 294 AMIVGYTQNKRPLDALQLFLHKKFVS-IVPNSVTIATVISASAQLRHLPLGRSVHAIGVK 352

Query: 376 CGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
            G ++ + V ++L+ M+ +C A+  A+S+F  +  K++  WN +++GY  N    + L  
Sbjct: 353 LGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVL 412

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F  +   G+  +  +    +  C    +  +    H   IK  F S  Y+ ++L+  Y  
Sbjct: 413 FNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSK 472

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
              L ++    N     +  +W AM+     QG +  ++ +F+ +++    P+E +  +I
Sbjct: 473 CADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSI 532

Query: 556 LNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN-S 613
           L++C+  G     K     + +       +   + ++D  A+ G+++ A + F Q+    
Sbjct: 533 LSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEA-LEFIQNMPIK 591

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCL 672
             + V+ + +     H  +    E   KM  A L P    F  +MS   +  G  DK   
Sbjct: 592 AGISVWGSFLHGCKLHSRLEFGEEAIKKM--AALHPETPDFYVLMSNLYTSYGRWDKSQT 649

Query: 673 LFKSMDSQYGMQPSPDC 689
           + + M  Q G+   P C
Sbjct: 650 IRRWMQEQ-GLVKLPGC 665



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 136/281 (48%), Gaps = 2/281 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + + +A  +S S  L+   LG  VH   VKLG      ++N L+ MY+KC        +F
Sbjct: 323 NSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIF 382

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             +  +++V+W  +++   +NG  +  L ++  M+  G  P+  +V + +  CV +    
Sbjct: 383 GRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLH 442

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G   H +A+K     N +V  ++LN Y+K  D+ +A+RVF  ++  +   W+AMIGGY 
Sbjct: 443 IGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYG 502

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSI 281
             G    ++++ + ML E I  ++  F + L  CS       G++    + R   +  S+
Sbjct: 503 MQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSM 562

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGG 321
                ++D+  ++  ++ A +  + M  K  IS W +   G
Sbjct: 563 KHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHG 603



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I +  +LS    L    +G   H + +K  F ++I++   L+ +YSKC       
Sbjct: 421 ISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQ 480

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF++M +RN V+W+ ++      G+    + ++ +M      PNE    S++  C   G
Sbjct: 481 RVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTG 540

Query: 160 ASEFG 164
               G
Sbjct: 541 MVTAG 545


>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19220, mitochondrial; Flags: Precursor
          Length = 951

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 187/708 (26%), Positives = 345/708 (48%), Gaps = 17/708 (2%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           + +H   ++ G   D  L N L+ +Y+K         VF  M  R++VSW  I++  + N
Sbjct: 208 SMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267

Query: 124 GEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEKNPF 181
           G     L+ +  M  +G   +      V+  C S+     G S+H   +K     E +  
Sbjct: 268 GHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVS 327

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FE 240
           VG S+++ Y+K GD  AAE VF  +   DV   NA++ G+A  G   EA  +++ M   +
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIKSSGMDY 299
            I  D  T ++    C  ++    GR +HG  +R E++  ++ ++N++IDMY K      
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQ 447

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILLRQC 357
           A  +F+    +D++SWN++   FS+N    +  +LF + +   S S+ +  T   +L  C
Sbjct: 448 AELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS-YKNITTW 416
                L  G  + C     GF D     +S+I M+  C  +  A    + +S  +++T+W
Sbjct: 508 DSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSW 567

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ---IHGA 473
           N ++SG   +    + L+ F  +   G   +      ++ T   S N  +V Q    HG 
Sbjct: 568 NSVISGCASSGHHLESLRAFQAMSREGKIRH--DLITLLGTISASGNLGLVLQGRCFHGL 625

Query: 474 IIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            IK+       + ++LI  Y     ++++ +        ++ SW  ++SAL       E 
Sbjct: 626 AIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREV 685

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
             +F +L     +P+E     +L++   +G+       H  +I+ GF    +V++A++D 
Sbjct: 686 FQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 742

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANLQPSQA 652
           Y+ CG ++     F  S   N +  +N++I A+  HG+  +AME+F ++   + ++P+++
Sbjct: 743 YSSCGMLETGMKVFRNS-GVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS 801

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
           +F+S++SACSH G +D+G   +K M+ ++G++P  +    +VDML R G L +A   I  
Sbjct: 802 SFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITG 861

Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +       V+ +LLS C  HG+ +LG+  +E L  + P N + ++ L+
Sbjct: 862 IGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLA 909



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 174/703 (24%), Positives = 322/703 (45%), Gaps = 51/703 (7%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VH   +K G   D+   + L+  Y + G       +FDE+ E++++ W  +++A  QNG 
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS---IHCFALKIRIEKNPFV 182
           +   + ++++M   G   NEF   +++    ++ +         +HC A++  +  +  +
Sbjct: 169 YIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             +++N YAK  ++++AE VF  +   D+  WN ++      G+  ++L    SM   G 
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRS--EVECSISIVNALIDMYIKSSGMDYA 300
             D  TF   +  CS + +  +G  +HGL+I+S    E  +S+ N++I MY K    + A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF-ILSGSRPNHVTFSILLRQCGK 359
             VFE +  +DVIS N +  GF+ N    +   + ++   +   +P+  T   +   CG 
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICG- 404

Query: 360 LLDLDLGLQLQCLALHCGFLDEE------NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
               DL    +  A+H   +  E       V +S+I M+ +CG    A  +F   +++++
Sbjct: 405 ----DLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDL 460

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV-----VETCCRSENQQMVG 468
            +WN ++S +  N           N+++  V    C+ F +     + T C S +  + G
Sbjct: 461 VSWNSMISAFSQN----GFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516

Query: 469 Q-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMMSALVH 526
           + +H  + K GF       +S+I  Y+    L ++F      +E  D+ SW +++S    
Sbjct: 517 KSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCAS 576

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYI--LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
            GH+ E++  F ++   G+   + I  LGTI ++   +G   + +  H   IK     + 
Sbjct: 577 SGHHLESLRAFQAMSREGKIRHDLITLLGTI-SASGNLGLVLQGRCFHGLAIKSLRELDT 635

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
            + + +I  Y +C DI+ A   F    + N +  +N +I A + +    E  ++F  +K 
Sbjct: 636 QLQNTLITMYGRCKDIESAVKVFGLISDPN-LCSWNCVISALSQNKAGREVFQLFRNLK- 693

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKG----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
             L+P++ TFV ++SA +  G    G    C L +      G Q +P     LVDM S  
Sbjct: 694 --LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-----GFQANPFVSAALVDMYSSC 746

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
           G LE    V        S + + S++S    HG   +GE A E
Sbjct: 747 GMLETGMKVFRNSGVN-SISAWNSVISAHGFHG---MGEKAME 785



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 149/616 (24%), Positives = 272/616 (44%), Gaps = 39/616 (6%)

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
           +E   S+HCFALK  + ++      +L FY + G++ ++  +F  +   DV  WN+MI  
Sbjct: 103 TETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITA 162

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
               G    A+ +   M+ +G   D  T + A    S +        +H L I + +   
Sbjct: 163 LNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGD 222

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            S+ NAL+++Y K   +  A  VF  M  +D++SWNT+      N +P ++   F     
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAV 398
           SG   + VTFS ++  C  + +L LG  L  L +  G+  E +V+  +S+I M+ +CG  
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT 342

Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVET 457
           E A +VF+ +  +++ + N +L+G+  N    +       +     ++ +  T   +   
Sbjct: 343 EAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSI 402

Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGY-ICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
           C      +    +HG  ++    S    + +S+I  Y   G    +          D+ S
Sbjct: 403 CGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS 462

Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT---ILNSCAAIGAYQRTKSIHP 573
           W +M+SA    G  H+A  +F  +V +     ++ L T   IL SC +  +    KS+H 
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVV-SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHC 521

Query: 574 FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVS 633
           ++ KLGF   +  A++VI+ Y  C D+  A +  +    + D+  +N++I   A  G   
Sbjct: 522 WLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHL 581

Query: 634 EAMEIFDKM-KLANLQPSQATFVSVMSACSHKGLVDKG-C---LLFKS---MDSQ----- 680
           E++  F  M +   ++    T +  +SA  + GLV +G C   L  KS   +D+Q     
Sbjct: 582 ESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTL 641

Query: 681 ----------------YGMQPSPD--CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
                           +G+   P+   + C++  LS+N    +   +   +  +P+   +
Sbjct: 642 ITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITF 701

Query: 723 RSLLSGCRIHGNKELG 738
             LLS     G+   G
Sbjct: 702 VGLLSASTQLGSTSYG 717



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 141/626 (22%), Positives = 289/626 (46%), Gaps = 23/626 (3%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND--IFLQNNLIAMYSKCGYFGWGLR 100
           D +  +  +S   +++   LG  +HG ++K G++ +  + + N++I+MYSKCG       
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSMG 159
           VF+E+  R+++S   I++    NG F+    +   M++ +   P+   V S+  +C  + 
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407

Query: 160 ASEFGYSIHCFALKIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            S  G ++H + +++ ++     V  SV++ Y K G    AE +F + +  D+  WN+MI
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMI 467

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKY---TFINALQGCSLVADFDIGRQIHGLIIRS 275
             ++  G+  +A N+   ++ E  +  K+   T +  L  C        G+ +H  + + 
Sbjct: 468 SAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKL 526

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMAD-KDVISWNTLFGGFSENKNPGQTASL 334
               ++   N++I+MYI    +  AF   E M++ +D+ SWN++  G + + +  ++   
Sbjct: 527 GFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRA 586

Query: 335 FHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQC---LALHCGFLDEENVTSSLIY 390
           F      G  R + +T    +   G   +L L LQ +C   LA+      +  + ++LI 
Sbjct: 587 FQAMSREGKIRHDLITLLGTISASG---NLGLVLQGRCFHGLAIKSLRELDTQLQNTLIT 643

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ RC  +E A  VF  +S  N+ +WN ++S    N    +V + F N+    +E N  T
Sbjct: 644 MYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEIT 700

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
           F  ++    +  +     Q H  +I+ GF +  ++ ++L+  Y + G L+   +    + 
Sbjct: 701 FVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSG 760

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTK 569
              +++W +++SA    G   +A+ +F  L    E +P++    ++L++C+  G      
Sbjct: 761 VNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL 820

Query: 570 SIHP-FVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
           S +     K G          ++D   + G ++ A              V+  L+ A  +
Sbjct: 821 SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNY 880

Query: 629 HGLVSEAMEIFDKMKLANLQPSQATF 654
           HG      E+ +   L  ++P  A++
Sbjct: 881 HGDTKLGKEVAE--VLFEMEPDNASY 904



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/430 (20%), Positives = 206/430 (47%), Gaps = 9/430 (2%)

Query: 240 EGITMDK-YTFI-NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
           E  TM+  + F+ + L+   +  + +  R +H   ++  +   ++  + L+  Y ++  +
Sbjct: 79  ENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGEL 138

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             +  +F+ + +KDVI WN++    ++N        LF + I  G+  +  T  +     
Sbjct: 139 VSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASAL 198

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
             L        L CLA+  G + + ++ ++L+ ++ +   +  A  VF ++ +++I +WN
Sbjct: 199 SSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWN 258

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            +++    N      L+ F ++  SG E +  TF  V+  C   E   +   +HG +IK+
Sbjct: 259 TIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKS 318

Query: 478 GFSSCGYIC--SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
           G+S   ++   +S+I  Y   G  + +          D+ S  A+++     G   EA  
Sbjct: 319 GYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFG 378

Query: 536 IFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE-VYVASAVIDA 593
           I + +    + +PD   + +I + C  +   +  +++H + +++   +  + V ++VID 
Sbjct: 379 ILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM--KLANLQPSQ 651
           Y KCG    A + F ++    D++ +N++I A++ +G   +A  +F ++  + +  + S 
Sbjct: 439 YGKCGLTTQAELLF-KTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSL 497

Query: 652 ATFVSVMSAC 661
           +T ++++++C
Sbjct: 498 STVLAILTSC 507



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 4/227 (1%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D I L  ++S S NL   + G   HG  +K     D  LQN LI MY +C      +
Sbjct: 596 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 655

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +VF  +++ NL SW  ++SA  QN       +++ ++K     PNE     ++     +G
Sbjct: 656 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLG 712

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           ++ +G   HC  ++   + NPFV  ++++ Y+  G +    +VF +   + +  WN++I 
Sbjct: 713 STSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVIS 772

Query: 220 GYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIG 265
            +   G G +A+ +   +     +  +K +FI+ L  CS     D G
Sbjct: 773 AHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 819



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 14/194 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  + I     LS S  L S   G Q H H+++ GF  + F+   L+ MYS CG    G+
Sbjct: 694 LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGM 753

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSM 158
           +VF      ++ +W  ++SA   +G  +  ++++ ++ +N  M PN+ +  S++  C   
Sbjct: 754 KVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHS 813

Query: 159 GASEFGYSIH-----CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSI-SSDDVG 212
           G  + G S +      F +K   E   +    +++   + G +  A      I      G
Sbjct: 814 GFIDEGLSYYKQMEEKFGVKPVTEHRVW----IVDMLGRAGKLREAYEFITGIGEPQKAG 869

Query: 213 CWNAMIGGYAHCGY 226
            W A++     C Y
Sbjct: 870 VWGALLSA---CNY 880


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/701 (24%), Positives = 333/701 (47%), Gaps = 7/701 (0%)

Query: 64  TQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQN 123
           +Q+H H+V  G  +D      L+  Y++ G       VF+     +   + +++   + +
Sbjct: 18  SQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWH 77

Query: 124 GEFDMGLKMYVDMKTNGFMPNE---FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
             FD  + +Y      G    +   F   SV+K    +G    G  +H   +K  +  + 
Sbjct: 78  HLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDH 137

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +G S+L  Y +LG ++ A +VF  I   D+  W++++  Y   G   E L ++  M+ E
Sbjct: 138 VIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSE 197

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           G+  D  T ++  + C  V    + + +HG +IR E+    S+ N+LI MY + S +  A
Sbjct: 198 GVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGA 257

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
             +FE ++D     W ++    ++N    +    F K   S    N VT   +L  C +L
Sbjct: 258 KGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARL 317

Query: 361 LDLDLGLQLQCLALHCGFLDEE-NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
             L  G  + C  L       + ++  +L+  +  C  +     +   +   ++ +WN L
Sbjct: 318 GWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTL 377

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           +S Y     + + +  F  + E G+  +  +    +  C  + + +   QIHG + K GF
Sbjct: 378 ISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF 437

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
           +   ++ +SL+  Y   G +D ++   +      + +W  M+      G + EA+ +F  
Sbjct: 438 AD-EFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDE 496

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +       +E    + + +C+  G   + K IH  ++  G   ++Y+ +A++D YAKCGD
Sbjct: 497 MCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGD 556

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
           +K A+  F+ S     V+ ++ +I AY  HG ++ A  +F KM  ++++P++ TF++++S
Sbjct: 557 LKTAQGVFN-SMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILS 615

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC H G V++G   F SM   YG+ P+ + +  +VD+LSR G ++ A  +I+        
Sbjct: 616 ACRHAGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDA 674

Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +++ +LL+GCRIHG  +L     ++L  +   +   + LLS
Sbjct: 675 SIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLS 715



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 265/571 (46%), Gaps = 2/571 (0%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           V+G +VHG IVK G   D  +  +L+ MY + G      +VFDE+  R+LVSW+ +V+  
Sbjct: 119 VVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACY 178

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           ++NG    GL+M   M + G  P+   + SV + C  +G      S+H + ++  +  + 
Sbjct: 179 VENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDA 238

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S++  Y +   +  A+ +F S+S     CW +MI      G   EA++    M   
Sbjct: 239 SLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQES 298

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE-CSISIVNALIDMYIKSSGMDY 299
            + ++  T I+ L  C+ +     G+ +H  I+R E++   + +  AL+D Y     +  
Sbjct: 299 EVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISS 358

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
             K+   + +  V+SWNTL   ++      +   LF   +  G  P+  + +  +  C  
Sbjct: 359 CEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAG 418

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
              +  G Q+       GF D E V +SL+ M+ +CG V++A+++FD +  K+I TWN +
Sbjct: 419 ASSVRFGQQIHGHVTKRGFAD-EFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCM 477

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           + G+  N    + LK F  +  + +++N  TF   ++ C  S        IH  ++ +G 
Sbjct: 478 ICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGV 537

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               YI ++L+  Y   G L  +    N      + SW AM++A    G    A T+F  
Sbjct: 538 QKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTK 597

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           +VE+  KP+E     IL++C   G+ +  K     +   G        ++++D  ++ GD
Sbjct: 598 MVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGD 657

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
           I GA      +    D  ++  L+     HG
Sbjct: 658 IDGAYEIIKSTCQHIDASIWGALLNGCRIHG 688



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 14/289 (4%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L  D   LA S+S      S   G Q+HGH+ K GF ++ F+QN+L+ MYSKCG+     
Sbjct: 402 LMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADE-FVQNSLMDMYSKCGFVDLAY 460

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD++ E+++V+W  ++    QNG     LK++ +M  N    NE    S ++ C + G
Sbjct: 461 TIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSG 520

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
               G  IH   +   ++K+ ++  ++++ YAK GD+  A+ VF S+    V  W+AMI 
Sbjct: 521 YLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIA 580

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR------QIHGLII 273
            Y   G    A  + + M+   I  ++ TF+N L  C      + G+      + +G++ 
Sbjct: 581 AYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVP 640

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGG 321
            +E   SI      +D+  ++  +D A+++ +      D   W  L  G
Sbjct: 641 NAEHFASI------VDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNG 683



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/275 (20%), Positives = 123/275 (44%), Gaps = 16/275 (5%)

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
           + Q+H  ++ TG  S     + L++SY   G L +S          D   +G ++   + 
Sbjct: 17  LSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLW 76

Query: 527 QGHNHEAVTIFHSLVEAGEKPDE---YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
                + V+++H  ++ G +  +   ++  +++ + + +G     + +H  ++K G  T+
Sbjct: 77  HHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTD 136

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
             + ++++  Y + G +  AR  FD+     D++ +++++  Y  +G   E +E+   M 
Sbjct: 137 HVIGTSLLGMYGELGCLSDARKVFDE-IRVRDLVSWSSVVACYVENGRPREGLEMLRWMV 195

Query: 644 LANLQPSQATFVSVMSACSHKGLVD-----KGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
              + P   T +SV  AC   G +       G ++ K M     ++ S      L+ M  
Sbjct: 196 SEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNS------LIVMYG 249

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
           +  YL  AK + E +   PS   + S++S C  +G
Sbjct: 250 QCSYLRGAKGMFESVS-DPSTACWTSMISSCNQNG 283


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 260/510 (50%), Gaps = 37/510 (7%)

Query: 287 LIDMYIKSS---GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
           LI++ + S    G+ YA  VFE + + + + WNT+  G + + +P  + +L+   +  G 
Sbjct: 1   LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            PN  TF  LL+ C K      G Q+    L  GF  +  V +SLI M+ +   +E A+ 
Sbjct: 61  LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120

Query: 404 VFDNVSY-------------------------------KNITTWNELLSGYCFNCCDADV 432
           VFD  S+                               K++ +WN ++SGY    C  + 
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180

Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
           L+ F  + +  V  +  T+  V+  C  S + ++  Q+H  +   GF S   I ++LI  
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDL 240

Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
           Y   G+++ +     G    D+ SW  ++    H     EA+ +F  ++ +GE P++  +
Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300

Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKL--GFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
            ++L +CA +GA    + IH ++ K   G      + +++ID YAKCGDI+ A   F+  
Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360

Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
            + + +  +N +I  +A HG    + ++F +M+   ++P   TFV ++SACSH G++D G
Sbjct: 361 LHKS-LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG 419

Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCR 730
             +F+SM   Y M P  + YGC++D+L  +G  ++A+ +I  M  +P   ++ SLL  C+
Sbjct: 420 RHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 479

Query: 731 IHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           +HGN EL E  ++ L+ + P+N ++++LLS
Sbjct: 480 MHGNVELAESFAQNLIKIEPENPSSYILLS 509



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/515 (25%), Positives = 233/515 (45%), Gaps = 66/515 (12%)

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
           +   VF+ + E N + W  ++     + +    L +YV M + G +PN +    ++K C 
Sbjct: 16  YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCA 75

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY-------------------------- 190
                  G  IH   LK+  + + +V  S+++ Y                          
Sbjct: 76  KSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTA 135

Query: 191 -----AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
                A  GD+ +A+++F  I   DV  WNAMI GYA  G   EAL +   M+   +  D
Sbjct: 136 LITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPD 195

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + T++  L  C+     ++GRQ+H  +     + ++ IVNALID+Y K   ++ A  +F+
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            ++ KDVISWNTL GG++      +   LF + + SG  PN VT   +L  C  L  +D+
Sbjct: 256 GLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDI 315

Query: 366 GLQLQCL--ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
           G  +         G  +  ++ +SLI M+ +CG +E AH VF+++ +K++++WN ++ G+
Sbjct: 316 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGF 375

Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
             +         F  + + G+E +  TF  ++  C            H  ++  G     
Sbjct: 376 AMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS-----------HSGMLDLG----R 420

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           +I  S+ + Y    +L++               +G M+  L H G   EA  + +++   
Sbjct: 421 HIFRSMTQDYKMTPKLEH---------------YGCMIDLLGHSGLFKEAEEMINTM--- 462

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
             +PD  I  ++L +C   G  +  +S    +IK+
Sbjct: 463 EMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKI 497



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 169/357 (47%), Gaps = 36/357 (10%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK-------------- 91
           FL KS + S   K+   G Q+HG ++KLGF  D+++  +LI+MY +              
Sbjct: 69  FLLKSCAKS---KTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRS 125

Query: 92  ------------CGYFGWG-----LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
                        GY   G      ++FDE+  +++VSW  ++S   + G +   L+++ 
Sbjct: 126 SHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFE 185

Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
           +M      P+E    +V+  C   G+ E G  +H +      + N  +  ++++ Y+K G
Sbjct: 186 EMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG 245

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +V  A  +F  +S  DV  WN +IGGY H     EAL +   ML  G T +  T ++ L 
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLP 305

Query: 255 GCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
            C+ +   DIGR IH  I +    V  + S+  +LIDMY K   ++ A +VF  M  K +
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
            SWN +  GF+ +     +  LF +    G  P+ +TF  LL  C     LDLG  +
Sbjct: 366 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 113/231 (48%), Gaps = 2/231 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D       LS   +  S  LG QVH  +   GF +++ + N LI +YSKCG      
Sbjct: 192 VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETAC 251

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +F  ++ ++++SW  ++        +   L ++ +M  +G  PN+  + SV+  C  +G
Sbjct: 252 GLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLG 311

Query: 160 ASEFGYSIHCFALKIR--IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           A + G  IH +  K    +     +  S+++ YAK GD+ AA +VF S+    +  WNAM
Sbjct: 312 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAM 371

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
           I G+A  G    + ++ S M   GI  D  TF+  L  CS     D+GR I
Sbjct: 372 IFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422


>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 563

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 153/565 (27%), Positives = 278/565 (49%), Gaps = 3/565 (0%)

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           W  ++ A   NG F   L +Y  MK     P+ +   SV+  C ++G  E G  +    L
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +I    + ++G ++++ YA+ GD+  A  VF  ++  D+  WN++I GY+  GY  EAL 
Sbjct: 61  EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALE 120

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   +   G+  D +T  + L  C  +     G  IHGL+ +  +   + + N L+ MY 
Sbjct: 121 IYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYF 180

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +  A +VF +M  KD +SWNTL  G+ + +   ++  LF + +    RP+ +T + 
Sbjct: 181 KFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMV-KRFRPDLLTITS 239

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +LR CG L DL+ G  +    L  G   +   ++ +I  + +CG +  +   FD +  ++
Sbjct: 240 VLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRD 299

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
             +WN L++GY  +    + +K F  + +  ++ +  TF  ++    R  + ++  +IH 
Sbjct: 300 SVSWNTLINGYIQSRSYGEGVKLFKKM-KMDLKPDSITFVTLLSISTRLADTELGKEIHC 358

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            + K GF S   + ++L+  Y   G + +S +     +  D+ +W  +++A V       
Sbjct: 359 DLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTL 418

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
           A  +   +      PD   L  IL  C+ I A ++ K +H    K GF + V V +A+I+
Sbjct: 419 AFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIE 478

Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
            Y+KC ++K     F +   + DV+ +  L+ AY  +G   +A+  F +M+ A + P   
Sbjct: 479 MYSKCSNLKYCIRVF-EDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDHI 537

Query: 653 TFVSVMSACSHKGLVDKGCLLFKSM 677
            FV+++ ACSH G V++G   F  M
Sbjct: 538 AFVAIIYACSHSGSVEEGLACFDHM 562



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 254/507 (50%), Gaps = 4/507 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G  V  H++++GF  D+++ N L+ MY++ G       VF+EM  R++VSW  ++S   
Sbjct: 51  IGNVVQNHVLEIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYS 110

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG +D  L++Y +++  G  P+ F + SV+  C  + A + G  IH    K+ +  +  
Sbjct: 111 ANGYWDEALEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVI 170

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +   +L+ Y K G +  A+RVF  +   D   WN +I GY       E++ +   M+ + 
Sbjct: 171 MSNGLLSMYFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMV-KR 229

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T  + L+ C L+ D + G+ +H  I+RS +E  ++  N +ID Y K   +  + 
Sbjct: 230 FRPDLLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASR 289

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K F+R+  +D +SWNTL  G+ ++++ G+   LF K  +   +P+ +TF  LL    +L 
Sbjct: 290 KAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKMKMD-LKPDSITFVTLLSISTRLA 348

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
           D +LG ++ C     GF  +  V+++L+ M+ +CG V+ +  VF+N+  ++I TWN +++
Sbjct: 349 DTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIA 408

Query: 422 GYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
             C    D  +  +    +    +  +  T   ++  C     ++   ++H    K GF 
Sbjct: 409 A-CVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFE 467

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + ++LI+ Y     L          +  D+ +W A++SA    G   +A+  F  +
Sbjct: 468 STVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEM 527

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQR 567
            EAG  PD      I+ +C+  G+ + 
Sbjct: 528 EEAGIIPDHIAFVAIIYACSHSGSVEE 554



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 198/422 (46%), Gaps = 2/422 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           L+ D   L+  L     L +   G  +HG + KLG   D+ + N L++MY K G      
Sbjct: 130 LKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQ 189

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           RVF++M  ++ VSW  ++    Q   F+  ++++ +M    F P+   + SV++ C  + 
Sbjct: 190 RVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREM-VKRFRPDLLTITSVLRACGLLR 248

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             EFG  +H + L+  IE +      V++ YAK GD+ A+ + F  I   D   WN +I 
Sbjct: 249 DLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLIN 308

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY       E + +   M  + +  D  TF+  L   + +AD ++G++IH  + +   + 
Sbjct: 309 GYIQSRSYGEGVKLFKKMKMD-LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDS 367

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
            + + NAL+DMY K   +  + KVFE M  +D+++WNT+     + ++      +  +  
Sbjct: 368 DLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMR 427

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
                P+  T   +L  C  +     G ++       GF     V ++LI M+ +C  ++
Sbjct: 428 NEELIPDMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIEMYSKCSNLK 487

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
               VF+++  K++ TW  L+S Y         L+ F  + E+G+  +   F  ++  C 
Sbjct: 488 YCIRVFEDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACS 547

Query: 460 RS 461
            S
Sbjct: 548 HS 549



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 2/108 (1%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G +VH    K GF + + + N LI MYSKC    + +RVF++M  +++V+WT +VSA   
Sbjct: 454 GKEVHACTFKFGFESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVSAYGM 513

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            GE    L+ + +M+  G +P+  A  +++  C   G+ E G  + CF
Sbjct: 514 YGEGKKALRAFAEMEEAGIIPDHIAFVAIIYACSHSGSVEEG--LACF 559


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 174/641 (27%), Positives = 315/641 (49%), Gaps = 30/641 (4%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
           ++H  A+   ++   FV  S+   YAK      +A +VF++  + DV  +N ++      
Sbjct: 58  ALHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDR 117

Query: 225 GYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFD---IGRQIHGLIIRSEVECS 280
           G   EAL   + ML  G +  D  T   AL   +   + D   I RQ+H L  RS +   
Sbjct: 118 G---EALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVAD 174

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN-PGQTASLFHKFI 339
           + + NAL+  Y + + +  A +VF+ M  +D++SWN +  G +++ + P +   +F + +
Sbjct: 175 VFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLL 234

Query: 340 LSGS---RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
             G    RP+ ++   ++  CG    ++LG Q+    +  G   + ++ + L+ M+ + G
Sbjct: 235 KDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSG 294

Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
           A   A  +  ++  +++ +W   +S       + D ++ F  + + GV  N  TF  ++ 
Sbjct: 295 AAGCARKLLKSMDERDVISWTTAIS----MDGEEDAIELFNGMRQDGVPPNEVTFVALMS 350

Query: 457 TC---CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
                C +   QM   IH   +KTG S      +SLI  Y    ++D++    +   R +
Sbjct: 351 ALAAGCPARYGQM---IHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPE 407

Query: 514 MASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT--KSI 571
           + +W A++S        +EA+ +F  +V    +P+E    ++L++  A+        +  
Sbjct: 408 IIAWNALISGYAQNELCNEALQVFSCMVRC-LRPNETTFASVLSAVTAVETVSMAYGEMY 466

Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGL 631
           H   +KLG     YV+ A+ID YAK G ++ +R AFD + + + +I +  +I A+A HG 
Sbjct: 467 HCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRS-LIAWTAIISAHAKHGN 525

Query: 632 VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
               M +FD M  + + P     +SV++AC H G V+ G  +F SM +++ ++P P+ Y 
Sbjct: 526 YDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVEPWPEHYA 585

Query: 692 CLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPK 751
           C++DML R G LE+A+ ++  MP  PS +  +SLL  CRIHGN  + E  +  L    P 
Sbjct: 586 CVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERVAGILTETEPT 645

Query: 752 NDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIKTVDLKLEL 792
              A+VLLS    ++     D  GV  V   ++   ++ E+
Sbjct: 646 ESGAYVLLSNIYAEKG----DWGGVAKVRREMREKGVRKEI 682



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 156/610 (25%), Positives = 263/610 (43%), Gaps = 24/610 (3%)

Query: 44  PIFLAKSLSLSENLKSRVLG--TQVHGHIVKLGFTNDIFLQNNLIAMYSK-CGYFGWGLR 100
           P+  +   + +  + S V      +HG  +  G     F+ N+L A Y+K    F    +
Sbjct: 35  PLLASSPAAFTAAVPSSVPANLPALHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAK 94

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           VF     R++ S+  I+SA    GE  +    ++ +++    P+   +   + +  S G 
Sbjct: 95  VFHTARARDVSSYNTILSALPDRGEA-LAFAAWM-LRSGDVRPDAVTLTVALSLAASRGE 152

Query: 161 SEFGY---SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
           ++  +    +H  A +  +  + FVG +++  Y++   + AA RVF  + + D+  WNAM
Sbjct: 153 ADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAM 212

Query: 218 IGGYAHCGY-GFEALNVVSSMLFEG---ITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
           I G A  G    E + V   +L +G   +  D+ +  + +  C      ++GRQ+H   +
Sbjct: 213 ICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTV 272

Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
           +  VE  +SI N L+ MY KS     A K+ + M ++DVISW T      E         
Sbjct: 273 KLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMDGEE----DAIE 328

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
           LF+     G  PN VTF  L+           G  +  + L  G  DE    +SLI M+ 
Sbjct: 329 LFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYA 388

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +   ++ A +VFD +    I  WN L+SGY  N    + L+ F  +    +  N  TF  
Sbjct: 389 KLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRC-LRPNETTFAS 447

Query: 454 VVETCCRSENQQMV-GQI-HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER 511
           V+      E   M  G++ H   +K G     Y+  +LI  Y   G L+ S +  +    
Sbjct: 448 VLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVH 507

Query: 512 LDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
             + +W A++SA    G+    + +F  +V +G  PD  +L ++L +C   GA    + I
Sbjct: 508 RSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREI 567

Query: 572 ---HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
               P    +    E Y  + VID   + G ++ A     Q      V    +L+ A   
Sbjct: 568 FDSMPAEHHVEPWPEHY--ACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRI 625

Query: 629 HGLVSEAMEI 638
           HG  S A  +
Sbjct: 626 HGNTSIAERV 635



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 207/440 (47%), Gaps = 17/440 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGT----QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYF 95
           +R D + L  +LSL+ + +    G     Q+H    + G   D+F+ N L+  YS+    
Sbjct: 133 VRPDAVTLTVALSLAAS-RGEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALL 191

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGE--FDMGLKMYVDMKTNG--FMPNEFAVGSV 151
           G   RVFDEM  R+LVSW  ++    Q+G+   ++ L     +K  G    P+  +V SV
Sbjct: 192 GAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSV 251

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +  C S G  E G  +H F +K+ +E    +G  ++  Y K G    A ++  S+   DV
Sbjct: 252 IPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDV 311

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W   I          +A+ + + M  +G+  ++ TF+  +   +       G+ IH +
Sbjct: 312 ISWTTAISMDGE----EDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTV 367

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
            +++ V    +  N+LI MY K   MD A  VF+RM   ++I+WN L  G+++N+   + 
Sbjct: 368 CLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEA 427

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEENVTSSLI 389
             +F   ++   RPN  TF+ +L     +  + +  G    C +L  G    E V+ +LI
Sbjct: 428 LQVF-SCMVRCLRPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALI 486

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ + G++E +   FD   ++++  W  ++S +  +     V+  F ++  SGV  +G 
Sbjct: 487 DMYAKRGSLEESRKAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGV 546

Query: 450 TFFYVVETCCRSENQQMVGQ 469
               V+ T CR       G+
Sbjct: 547 VLLSVL-TACRHSGAVNTGR 565


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 281/593 (47%), Gaps = 7/593 (1%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFIN 251
           G++ AA +VF  +   D+  W ++I  Y       EAL + S+M      ++ D      
Sbjct: 54  GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L+ C   ++   G  +H   +++ +  S+ + ++L+DMY +   +D + +VF  M  ++
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            ++W  +  G        +  + F +   S    +  TF+I L+ C  L  +  G  +  
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +  GF+    V +SL  M+  CG ++    +F+N+S +++ +W  L+  Y     +  
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            ++TF  +  S V  N  TF  +   C          Q+H  ++  G +    + +S++K
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G L ++     G    D+ SW  ++      G   E    F  + ++G KP ++ 
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L ++L+    +   +  + +H   +  G      V S++I+ Y+KCG IK A M F ++ 
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET- 472

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           + +D++    +I  YA HG   EA+++F+K      +P   TF+SV++AC+H G +D G 
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGF 532

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
             F  M   Y M+P+ + YGC+VD+L R G L DA+ +I  M ++    V+ +LL  C+ 
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKA 592

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIK 784
            G+ E G  A+E++L L P    A V L+       GNL   E   NV   +K
Sbjct: 593 KGDIERGRRAAERILELDPTCATALVTLAN-IYSSTGNL---EEAANVRKNMK 641



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 155/637 (24%), Positives = 277/637 (43%), Gaps = 39/637 (6%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT--NGFMPNEFAVGSVMKVCVS 157
           +VFD+M   ++VSWT I+   +     D  L ++  M+   +   P+   +  V+K C  
Sbjct: 61  QVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQ 120

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                +G S+H +A+K  +  + +VG S+L+ Y ++G +  + RVF  +   +   W A+
Sbjct: 121 SSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAI 180

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G  H G   E L   S M       D YTF  AL+ C+ +     G+ IH  +I    
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGF 240

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
             ++ + N+L  MY +   M     +FE M+++DV+SW +L   +       +    F K
Sbjct: 241 VTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIK 300

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              S   PN  TF+ +   C  L  L  G QL C  L  G  D  +V++S++ M+  CG 
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGN 360

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  A  +F  +  ++I +W+ ++ GYC      +  K F  + +SG +    T F +   
Sbjct: 361 LVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKP---TDFALASL 417

Query: 458 CCRSENQQMV---GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
              S N  ++    Q+H   +  G      + SSLI  Y   G +  +       +R D+
Sbjct: 418 LSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDI 477

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY--------- 565
            S  AM++     G + EA+ +F   ++ G +PD     ++L +C   G           
Sbjct: 478 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNM 537

Query: 566 -QRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            Q T ++ P     G          ++D   + G +  A    ++     D +V+ TL++
Sbjct: 538 MQETYNMRPAKEHYG---------CMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLI 588

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
           A    G +       +  ++  L P+ AT  V++ +  S  G +++   + K+M ++ G+
Sbjct: 589 ACKAKGDIERGRRAAE--RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK-GV 645

Query: 684 QPSP--------DCYGCLVDMLSRNGYLEDAKHVIEI 712
              P        DC    V     +   ED  +++E+
Sbjct: 646 IKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILEL 682



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/521 (22%), Positives = 222/521 (42%), Gaps = 43/521 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H + VK    + +++ ++L+ MY + G      RVF EM  RN V+WT I++  + 
Sbjct: 127 GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVH 186

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G +  GL  + +M  +  + + +     +K C  +   ++G +IH   +         V
Sbjct: 187 AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCV 246

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+   Y + G++     +F ++S  DV  W ++I  Y   G   +A+     M    +
Sbjct: 247 ANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQV 306

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ TF +    C+ ++    G Q+H  ++   +  S+S+ N+++ MY     +  A  
Sbjct: 307 PPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASV 366

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M  +D+ISW+T+ GG+ +     +    F     SG++P     + LL   G +  
Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAV 426

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           ++ G Q+  LAL  G      V SSLI M+ +CG+++ A  +F      +I +   +++G
Sbjct: 427 IEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + +  F    + G   +  TF  V+  C  S                     
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS--------------------- 525

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAE-----RLDMASWGAMMSALVHQGHNHEAVTIF 537
                         GQLD  F + N  +     R     +G M+  L   G   +A  + 
Sbjct: 526 --------------GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMI 571

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
           +   E   K D+ +  T+L +C A G  +R +     +++L
Sbjct: 572 N---EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILEL 609



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 2/380 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A +L     L+    G  +H H++  GF   + + N+L  MY++CG    GL +F
Sbjct: 208 DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLF 267

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M+ER++VSWT ++ A  + G+    ++ ++ M+ +   PNE    S+   C S+    
Sbjct: 268 ENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLV 327

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           +G  +HC  L + +  +  V  S++  Y+  G++ +A  +F  +   D+  W+ +IGGY 
Sbjct: 328 WGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYC 387

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G+G E     S M   G     +   + L     +A  + GRQ+H L +   +E + +
Sbjct: 388 QAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNST 447

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + ++LI+MY K   +  A  +F      D++S   +  G++E+    +   LF K +  G
Sbjct: 448 VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            RP+ VTF  +L  C     LDLG      +         +     ++ + CR G +  A
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567

Query: 402 HSVFDNVSY-KNITTWNELL 420
             + + +S+ K+   W  LL
Sbjct: 568 EKMINEMSWKKDDVVWTTLL 587



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/491 (21%), Positives = 216/491 (43%), Gaps = 40/491 (8%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH--KFILSG 342
           N+ +   I +  +  A +VF++M   D++SW ++   +    N  +   LF   + +   
Sbjct: 44  NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             P+    S++L+ CG+  ++  G  L   A+    L    V SSL+ M+ R G ++ + 
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163

Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            VF  + ++N  TW  +++G        + L  F  +  S    +  TF   ++ C    
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223

Query: 463 NQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-EFSNGAERLDMASWGAMM 521
             +    IH  +I  GF +   + +SL   Y   G++ +    F N +ER D+ SW +++
Sbjct: 224 QVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER-DVVSWTSLI 282

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
            A    G   +AV  F  +  +   P+E    ++ ++CA++      + +H  V+ LG N
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342

Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
             + V+++++  Y+ CG++  A + F Q     D+I ++T+I  Y   G   E  + F  
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLF-QGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401

Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR-- 699
           M+ +  +P+     S++S   +  +++ G  +  ++   +G++ +      L++M S+  
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCG 460

Query: 700 ------------------------NGYLE--DAKHVIEIMP------FQPSPTVYRSLLS 727
                                   NGY E   +K  I++        F+P    + S+L+
Sbjct: 461 SIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520

Query: 728 GCRIHGNKELG 738
            C   G  +LG
Sbjct: 521 ACTHSGQLDLG 531


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 248/480 (51%), Gaps = 17/480 (3%)

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           + LI  +I     DYAF +  R       +W+          +   T  L+H+       
Sbjct: 68  STLIFSHITPHPNDYAFNIMLRAT---TTTWH----------DYPLTLHLYHQMKTLNIS 114

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN+ TF  +   C  L ++ +     C     G  ++ +  +S++ M+ RCG   +A  V
Sbjct: 115 PNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKV 174

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSEN 463
           FD ++ K++ +WN LLSGY       + ++ F  + E SG E +  +   V+  C    +
Sbjct: 175 FDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD 234

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
            ++   + G +++ G     YI S+LI  Y   G+L +S    +G    D  +W A +SA
Sbjct: 235 LELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA 294

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
               G   EA+++FHS+ E G  P++  L  +L++CA+IGA    K +  +    G   +
Sbjct: 295 YAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHD 354

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM- 642
           ++VA+A+ID YAKCG ++ A+  F+     ND   +N +I A A HG   EA+ +F++M 
Sbjct: 355 IFVATALIDMYAKCGSLESAQRVFNDMPRKNDA-SWNAMISALASHGKAKEALSLFERMS 413

Query: 643 -KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
            +  + +P+  TFVS++SAC H GLVD+G  LF  M + +G+ P  + Y C+VD+LSR G
Sbjct: 414 DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAG 473

Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK 761
           +L +A  VIE MP +P      +L S C+   N ++GE   + LL L P N   +++ SK
Sbjct: 474 HLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSK 533



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/533 (24%), Positives = 233/533 (43%), Gaps = 50/533 (9%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           PIFL   LSL +   S     Q+H         + I   N+L++       F +   +F 
Sbjct: 20  PIFLL--LSLLKQCPSTKTLQQIHTQFT----IHSIHKPNHLLSQSISLKDFTYSTLIFS 73

Query: 104 EMAER-NLVSWTLIVSAAIQNG-EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
            +    N  ++ +++ A      ++ + L +Y  MKT    PN F    V   C ++   
Sbjct: 74  HITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEI 133

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
                 HC   K+ ++ +     S++  Y + G+   A +VF  I+  D+  WN+++ GY
Sbjct: 134 RMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGY 193

Query: 222 AHCGYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           A  G+  EA+ V   +  E G   D+ + ++ L  C  + D ++GR + G ++   ++ +
Sbjct: 194 AKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVN 253

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
             I +ALI MY K   +  + ++F+ M  +D I+WN     +++N    +  SLFH    
Sbjct: 254 SYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKE 313

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
           +G  PN VT + +L  C  +  LDLG Q+   A H G   +  V ++LI M+ +CG++E 
Sbjct: 314 NGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLES 373

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG--VEVNGCTFFYVVETC 458
           A  VF+++  KN  +WN ++S    +    + L  F  + + G     N  TF  ++  C
Sbjct: 374 AQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC 433

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                      +H  ++  G              Y  F  +   F      E      + 
Sbjct: 434 -----------VHAGLVDEG--------------YRLFDMMSTLFGLVPKIEH-----YS 463

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSI 571
            M+  L   GH +EA  +   +    EKPD   LG + ++C      QR K++
Sbjct: 464 CMVDLLSRAGHLYEAWDVIEKM---PEKPDNVTLGALHSAC------QRKKNV 507



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 16/301 (5%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
           +S    D + L   L     L    LG  V G +V+ G   + ++ + LI+MYSKCG   
Sbjct: 212 ESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELV 271

Query: 97  WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
              R+FD M  R+ ++W   +SA  QNG  D  + ++  MK NG  PN+  + +V+  C 
Sbjct: 272 SSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACA 331

Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           S+GA + G  +  +A    ++ + FV  ++++ YAK G + +A+RVF  +   +   WNA
Sbjct: 332 SIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNA 391

Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITM--DKYTFINALQGC---SLVAD----FDIGRQ 267
           MI   A  G   EAL++   M  EG +   +  TF++ L  C    LV +    FD+   
Sbjct: 392 MISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMST 451

Query: 268 IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENK 326
           + GL+ +      I   + ++D+  ++  +  A+ V E+M +K D ++   L       K
Sbjct: 452 LFGLVPK------IEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKK 505

Query: 327 N 327
           N
Sbjct: 506 N 506


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/586 (25%), Positives = 288/586 (49%), Gaps = 38/586 (6%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E++ F   +++  Y+    ++ AE++F S    +   WNA+I GY   G   EA N+   
Sbjct: 56  ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  +GI  ++YT  + L+ C+ +     G QIHG  I++  +  +++VN L+ MY +   
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKR 175

Query: 297 MDYAFKVFERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
           +  A  +FE M  +K+ ++W ++  G+S+N    +    F      G++ N  TF  +L 
Sbjct: 176 ISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLT 235

Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
            C  +    +G+Q+ C  +  GF     V S+LI M+ +C  +E A ++ + +   ++ +
Sbjct: 236 ACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS 295

Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ-QMVGQIHGAI 474
           WN ++ G        + L  F  + E  ++++  T   ++     S  + ++    H  I
Sbjct: 296 WNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLI 355

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +KTG+++   + ++L+  Y   G +D++ +   G    D+ SW A+++   H G   EA+
Sbjct: 356 VKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEAL 415

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
            +F ++   G  PD+ +  ++L++ A +   +  + +H   IK GF + + V ++++  Y
Sbjct: 416 KLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMY 475

Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
            KCG ++ A + F+ S    D+I +  LI+ YA +GL+ +A   FD              
Sbjct: 476 TKCGSLEDANVIFN-SMEIRDLITWTCLIVGYAKNGLLEDAQRYFD-------------- 520

Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
                                SM + YG+ P P+ Y C++D+  R+G     + ++  M 
Sbjct: 521 ---------------------SMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQME 559

Query: 715 FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
            +P  TV++++L+  R HGN E GE A++ L+ L P N   +V LS
Sbjct: 560 VEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLS 605



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 205/399 (51%), Gaps = 2/399 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ +   L   L +  +L   + G Q+HGH +K GF  D+ + N L+AMY++C       
Sbjct: 121 IKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAE 180

Query: 100 RVFDEM-AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            +F+ M  E+N V+WT +++   QNG     ++ + D++  G   N++   SV+  C S+
Sbjct: 181 YLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASV 240

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
            A   G  +HC  +K   + N +V  ++++ YAK  ++ +A  +   +  DDV  WN+MI
Sbjct: 241 SACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMI 300

Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV-ADFDIGRQIHGLIIRSEV 277
            G    G   EAL++   M    + +D +T  + L   +L   +  I    H LI+++  
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY 360

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
                + NAL+DMY K   MD A KVFE M +KDVISW  L  G + N +  +   LF  
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
             + G  P+ +  + +L    +L  L+ G Q+    +  GF    +V +SL+ M+ +CG+
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
           +E A+ +F+++  +++ TW  L+ GY  N    D  + F
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYF 519



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 141/576 (24%), Positives = 263/576 (45%), Gaps = 10/576 (1%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           D F  N +I  YS         ++F     +N +SW  ++S   ++G       ++ +M+
Sbjct: 58  DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           ++G  PNE+ +GSV+++C S+     G  IH   +K   + +  V   +L  YA+   ++
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRIS 177

Query: 198 AAERVFYSISSDDVG-CWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
            AE +F ++  +     W +M+ GY+  G+ F+A+     +  EG   ++YTF + L  C
Sbjct: 178 EAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTAC 237

Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
           + V+   +G Q+H  I++S  + +I + +ALIDMY K   M+ A  + E M   DV+SWN
Sbjct: 238 ASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWN 297

Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLAL 374
           ++  G       G+  S+F +      + +  T   +L  C  L   ++ +     CL +
Sbjct: 298 SMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NCFALSRTEMKIASSAHCLIV 356

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
             G+   + V ++L+ M+ + G ++ A  VF+ +  K++ +W  L++G   N    + LK
Sbjct: 357 KTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALK 416

Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
            FCN+   G+  +      V+         +   Q+HG  IK+GF S   + +SL+  Y 
Sbjct: 417 LFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYT 476

Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA-GEKPDEYILG 553
             G L+++    N  E  D+ +W  ++      G   +A   F S+    G  P      
Sbjct: 477 KCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYA 536

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ--SF 611
            +++     G + +   +   + ++    +  V  A++ A  K G+I+    A       
Sbjct: 537 CMIDLFGRSGDFVK---VEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMEL 593

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL 647
             N+ + Y  L   Y+  G   EA  +   MK  N+
Sbjct: 594 EPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 87/176 (49%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           + +  H  IVK G+     + N L+ MY+K G     L+VF+ M E++++SWT +V+   
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG +D  LK++ +M+  G  P++    SV+     +   EFG  +H   +K     +  
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           V  S++  Y K G +  A  +F S+   D+  W  +I GYA  G   +A     SM
Sbjct: 467 VNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM 522



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 15/226 (6%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I  A  LS S  L     G QVHG+ +K GF + + + N+L+ MY+KCG      
Sbjct: 426 ITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDAN 485

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT-NGFMPNEFAVGSVMKVCVSM 158
            +F+ M  R+L++WT ++    +NG  +   + +  M+T  G  P       ++ +    
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDL---F 542

Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAER---VFYSISSDDVGCWN 215
           G S     +     ++ +E +  V  ++L    K G++   ER       +  ++   + 
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVAD 261
            +   Y+  G   EA NV   M    I+ +         GCS V +
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEP--------GCSWVEE 640


>gi|302818166|ref|XP_002990757.1| hypothetical protein SELMODRAFT_132252 [Selaginella moellendorffii]
 gi|300141495|gb|EFJ08206.1| hypothetical protein SELMODRAFT_132252 [Selaginella moellendorffii]
          Length = 624

 Score =  259 bits (661), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/601 (26%), Positives = 297/601 (49%), Gaps = 13/601 (2%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
           IH   +   ++++  +G  ++  Y K G +A A RV  ++ +     W A+I  Y H G 
Sbjct: 17  IHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDTMPARGKLAWTAIISAYVHSGD 76

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             +A+ +   +L EG+  D  +F+  L   +L    ++   +HG I+ S +E  + + NA
Sbjct: 77  FHQAIYLFRCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANA 136

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           L+ MY K   +   +KVFERM +++V+SW  +    +      +   LF    L G RPN
Sbjct: 137 LMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIAASARLGELAEAMRLFRSMQLEGVRPN 196

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            +TFS  L       DL     +    +  GF     V ++ + M  RCG +  A  VF 
Sbjct: 197 EITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFQ 256

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           +++ ++  +WN +++          V   F  +   G   +  TF  ++ +  ++     
Sbjct: 257 SMAERDEISWNVMINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNLVDPP 316

Query: 467 VGQIHGAII----KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
           V   +  ++    ++G+ S   + ++L+  Y   G ++ + +        D+ S  A+++
Sbjct: 317 VPPFYQLVLNCIAESGYQSSLQVTNALVSFYGKCGDVEGARKVFGSISSPDVISCTALIA 376

Query: 523 ALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI--GAYQRTKSIHPFVIKLGF 580
           A   +    +A+ +F  L+ +G + ++     +L+SC ++  G +     IH  ++  GF
Sbjct: 377 AFSQRAQFQDALVVFRRLLHSGVRANQVTFLELLSSCRSLSDGLW-----IHSQIVASGF 431

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
            +EV VA+A+++ Y+ CG++K A+ A++ +    ++++ N  I A A +G    A+++F 
Sbjct: 432 QSEVDVAAALVEMYSGCGNLKQAKRAYN-AVAVKNLVLCNVYIAANAQNGNSERALKLFW 490

Query: 641 KMKL-ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
           +M+     +P   T  +V+SAC+H GLV +GC  F  M   Y +  +   Y CL+D+L R
Sbjct: 491 EMQQDGGFKPDGITLNAVLSACAHGGLVSQGCQYFAGMKCDYQLMCNSQHYSCLIDLLGR 550

Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
            G L+ A+ V   MPF P  +V  + L  CR H +KE G  A+ ++L L P + +A+V L
Sbjct: 551 AGRLDIAEKVTTSMPFPPDQSVRMAFLGACRTHHDKERGSEAARRVLQLDPFDHSAYVAL 610

Query: 760 S 760
           S
Sbjct: 611 S 611



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 238/501 (47%), Gaps = 10/501 (1%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +H  IV  G   D  L N L+ MY KCG      RV D M  R  ++WT I+SA + +G+
Sbjct: 17  IHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLDTMPARGKLAWTAIISAYVHSGD 76

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           F   + ++  +   G +P+  +  +++       + E    +H + ++  +E+   V  +
Sbjct: 77  FHQAIYLFRCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESGLEQELIVANA 136

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +++ Y+K  D+ +  +VF  +   +V  W  MI   A  G   EA+ +  SM  EG+  +
Sbjct: 137 LMSMYSKRLDLRSCWKVFERMPERNVVSWTVMIAASARLGELAEAMRLFRSMQLEGVRPN 196

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
           + TF + L   S   D    + IH  I+ S       + NA + M  +   +  A +VF+
Sbjct: 197 EITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAARVFQ 256

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-SILLRQCGKLLDLD 364
            MA++D ISWN +    +E     + ASLF + +  G RP+  TF SIL      L+D  
Sbjct: 257 SMAERDEISWNVMINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNLVDPP 316

Query: 365 LG----LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
           +     L L C+A   G+     VT++L+  + +CG VE A  VF ++S  ++ +   L+
Sbjct: 317 VPPFYQLVLNCIA-ESGYQSSLQVTNALVSFYGKCGDVEGARKVFGSISSPDVISCTALI 375

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + +       D L  F  +  SGV  N  TF  ++ + CRS +  +   IH  I+ +GF 
Sbjct: 376 AAFSQRAQFQDALVVFRRLLHSGVRANQVTFLELLSS-CRSLSDGL--WIHSQIVASGFQ 432

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
           S   + ++L++ Y   G L  +    N     ++      ++A    G++  A+ +F  +
Sbjct: 433 SEVDVAAALVEMYSGCGNLKQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKLFWEM 492

Query: 541 VE-AGEKPDEYILGTILNSCA 560
            +  G KPD   L  +L++CA
Sbjct: 493 QQDGGFKPDGITLNAVLSACA 513



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 178/401 (44%), Gaps = 29/401 (7%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R + I  + +L L    K       +H  IV  GF     + N  + M ++CG      
Sbjct: 193 VRPNEITFSSTLVLFSGSKDLRAAKLIHEQIVGSGFGAVTVVANACVGMLARCGDLAAAA 252

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM----KVC 155
           RVF  MAER+ +SW ++++AA + GE      ++++M   G  P+     S++    K  
Sbjct: 253 RVFQSMAERDEISWNVMINAAAEEGEAPRVASLFMEMMAEGRRPDRATFLSILSSMEKNL 312

Query: 156 VSMGASEF-GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCW 214
           V      F    ++C A +   + +  V  ++++FY K GDV  A +VF SISS DV   
Sbjct: 313 VDPPVPPFYQLVLNCIA-ESGYQSSLQVTNALVSFYGKCGDVEGARKVFGSISSPDVISC 371

Query: 215 NAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
            A+I  ++      +AL V   +L  G+  ++ TF+  L  C  ++D   G  IH  I+ 
Sbjct: 372 TALIAAFSQRAQFQDALVVFRRLLHSGVRANQVTFLELLSSCRSLSD---GLWIHSQIVA 428

Query: 275 SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASL 334
           S  +  + +  AL++MY     +  A + +  +A K+++  N      ++N N  +   L
Sbjct: 429 SGFQSEVDVAAALVEMYSGCGNLKQAKRAYNAVAVKNLVLCNVYIAANAQNGNSERALKL 488

Query: 335 FHKFILSGS-RPNHVTFSILLRQC--GKLLD--------LDLGLQLQCLALHCGFLDEEN 383
           F +    G  +P+ +T + +L  C  G L+         +    QL C + H        
Sbjct: 489 FWEMQQDGGFKPDGITLNAVLSACAHGGLVSQGCQYFAGMKCDYQLMCNSQH-------- 540

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
             S LI +  R G +++A  V  ++ +    +      G C
Sbjct: 541 -YSCLIDLLGRAGRLDIAEKVTTSMPFPPDQSVRMAFLGAC 580



 Score = 46.6 bits (109), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 26/114 (22%), Positives = 53/114 (46%), Gaps = 12/114 (10%)

Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
            + IH  ++  G + + ++ + ++  Y KCG +  AR   D +  +   + +  +I AY 
Sbjct: 14  ARMIHSRIVSSGLDRDHHLGNQLVQMYLKCGSLADARRVLD-TMPARGKLAWTAIISAYV 72

Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA-----------CSHKGLVDKG 670
           H G   +A+ +F  + L  + P   +FV+++ A           C H  +V+ G
Sbjct: 73  HSGDFHQAIYLFRCLLLEGVIPDAVSFVAMLGALALDESQELATCVHGWIVESG 126


>gi|449482323|ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 280/582 (48%), Gaps = 6/582 (1%)

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           YVD +  G   N     S++  CV   +  +   IH       +E N F+   +++ Y  
Sbjct: 104 YVDQQ--GIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTA 161

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG--FEALNVVSSMLFEGITMDKYTFI 250
            G +  A+++F   SS  V  WNA++ G    G       L+  + M   G+ ++ Y+F 
Sbjct: 162 CGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFA 221

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
           N ++  +  + F  G + HGL+I++ +  S  +   L+DMY K   +  A ++F  + ++
Sbjct: 222 NIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITER 281

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV+ W ++  GF+ N+   +      + I  G RPN V  + +L   G++    LG ++ 
Sbjct: 282 DVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVH 341

Query: 371 CLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +    +  +  + S+LI M+C+CG +    +VF     +N   W  L+SGY  N   
Sbjct: 342 AYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRL 401

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              +++   + + G   +  T   ++  C +    +   +IH   +K  F     I SSL
Sbjct: 402 EQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSL 461

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G +D + +  NG E+ ++  W AM+ + +     HEA+ IF ++  +  +PD 
Sbjct: 462 MVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDT 521

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             +  IL  C+     +  K IH  V+K  F    +V++ ++  Y KCG +K A+M F+ 
Sbjct: 522 VTMSRILYICSEQKMLKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFE- 580

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +      + +  +I AY   G   EA+++FD+M+   + P+  TF  V+S C   G VD+
Sbjct: 581 AIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDE 640

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIE 711
              +FK M  +Y ++PS + Y  ++ +L+R G LE+A+   E
Sbjct: 641 ALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRLEEARRCKE 682



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/558 (23%), Positives = 244/558 (43%), Gaps = 8/558 (1%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           KS     Q+H HI   G  N+ F++  L+ MY+ CG      ++FDE + +++  W  ++
Sbjct: 128 KSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNALL 187

Query: 118 SAAIQNGEFDMG--LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
              +  G  D    L  Y +M+  G   N ++  +++K      A   G   H   +K  
Sbjct: 188 RGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNG 247

Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
           +  +  +G ++++ Y K G +  A ++F  I+  DV  W ++I G+AH     EAL    
Sbjct: 248 LIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRLQREALEYTR 307

Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKS 294
            M+ +GI  +       L     +    +G+++H  +I+++     I I +ALIDMY K 
Sbjct: 308 RMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKC 367

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +     VF    +++ I W  L  G++ N    Q           G RP+ VT + +L
Sbjct: 368 GDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATIL 427

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C +L  L  G ++   A+   FL   ++ SSL+ M+ +CG ++    +F+ +  +N+ 
Sbjct: 428 PVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVI 487

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
            W  ++  Y  N C  + +  F  +  S    +  T   ++  C   +  +M  +IHG +
Sbjct: 488 LWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQV 547

Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
           +K  F    ++ + L+K Y   G +  +             +W A++ A    G   EA+
Sbjct: 548 LKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAI 607

Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV---IKLGFNTEVYVASAVI 591
            +F  +   G  P+ +    +L+ C   G       I   +    K+  + E Y  S VI
Sbjct: 608 DLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHY--SLVI 665

Query: 592 DAYAKCGDIKGARMAFDQ 609
               + G ++ AR   +Q
Sbjct: 666 AILTRFGRLEEARRCKEQ 683



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 4/394 (1%)

Query: 37  DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYF 95
           D  +R + + L   L +   + +R LG +VH +++K   ++  IF+Q+ LI MY KCG  
Sbjct: 311 DDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDI 370

Query: 96  GWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
           G G  VF    ERN + WT ++S    NG  +  ++  + M+  GF P+   V +++ VC
Sbjct: 371 GSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVC 430

Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
             + A   G  IH +A+K     N  +  S++  Y+K G +    ++F  +   +V  W 
Sbjct: 431 AQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLKLFNGMEQRNVILWT 490

Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           AMI  Y       EA+++  +M       D  T    L  CS      +G++IHG +++ 
Sbjct: 491 AMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKR 550

Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF 335
           + E    +   L+ +Y K   +  A  VFE +  K  ++W  +   + E+    +   LF
Sbjct: 551 KFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLF 610

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCR 394
            +    G  PNH TF ++L  C +   +D  L++ + +++       E   S +I +  R
Sbjct: 611 DRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKPSEEHYSLVIAILTR 670

Query: 395 CGAVEMAHSVFDNVSYKN-ITTWNELLS-GYCFN 426
            G +E A    + V  +  +T W    + GYC N
Sbjct: 671 FGRLEEARRCKEQVETEGAVTFWKPSFNCGYCCN 704



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 227/506 (44%), Gaps = 12/506 (2%)

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL ++  +  +GI ++  TF + +  C         +QIH  I  + +E +  I   L+
Sbjct: 97  EALTIMDYVDQQGIPVNATTFSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLV 156

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGG--FSENKNPGQTASLFHKFILSGSRPN 346
            MY     ++ A K+F+  + K V  WN L  G   +  ++     S + +    G   N
Sbjct: 157 HMYTACGSLEEAQKLFDESSSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELN 216

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             +F+ +++          GL+   L +  G +    + ++L+ M+ +CG +++A  +F 
Sbjct: 217 VYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFG 276

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            ++ +++  W  +++G+  N    + L+    + + G+  N      ++        +++
Sbjct: 277 EITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRL 336

Query: 467 VGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALV 525
             ++H  +IKT  +S   +I S+LI  Y   G + +       +   +   W A+MS   
Sbjct: 337 GQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYA 396

Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVY 585
             G   +AV     + + G +PD   + TIL  CA + A +  K IH + +K  F   V 
Sbjct: 397 LNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVS 456

Query: 586 VASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLA 645
           + S+++  Y+KCG +      F+      +VI++  +I +Y  +    EA++IF  M+L+
Sbjct: 457 IVSSLMVMYSKCGVMDYTLKLFN-GMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLS 515

Query: 646 NLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY---GMQPSPDCYGCLVDMLSRNGY 702
             +P   T   ++  CS + ++  G    K +  Q      +P       LV +  + G 
Sbjct: 516 KHRPDTVTMSRILYICSEQKMLKMG----KEIHGQVLKRKFEPVHFVSAELVKLYGKCGA 571

Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSG 728
           ++ AK V E +P +  P  + +++  
Sbjct: 572 VKMAKMVFEAIPVK-GPMTWTAIIEA 596


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 154/503 (30%), Positives = 265/503 (52%), Gaps = 2/503 (0%)

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           + D    +QIH  II S +  +  + N+L++ Y+    +  A ++F     K+V+SW  L
Sbjct: 34  LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G ++N    +   +F + I+   +PN VT S +L     L  + +   + C  +  GF
Sbjct: 94  ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
                V ++L+ M+ + G + +A  +F+++S +N+ TWN ++SGY  +    + +  F  
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNL 213

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +   G+ V+  T   ++         Q+   IHG II+TG+ +  +I ++L+  YV+   
Sbjct: 214 MRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNC 273

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILN 557
           +D++    +     D+A+W  M++      H   A+  F+ ++     K D   L  IL+
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
           SC+  GA Q+ + +H   IK  F   ++V SAVID YA CG+++ A+  F       DV+
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF-YGMGEKDVV 392

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
            +N +I     +G  ++A+++F +MK + L P ++TFVSV+ ACSH G+V +G  +F  M
Sbjct: 393 CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHM 452

Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
                + P+   Y C++D+L R G L+ A   I  MPFQP   VY +LL  CRIHGN +L
Sbjct: 453 VKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKL 512

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
           G   S+K+  + P +   +VLLS
Sbjct: 513 GHEISQKIFEMEPNDAGYYVLLS 535



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 227/460 (49%), Gaps = 6/460 (1%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           S+   LK      Q+H  I+  G T++ FL N+L+  Y  CG      ++F     +N+V
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
           SWT+++S   +N  F   + ++ +M    F PN   + SV+    ++G      S+HCF 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
           ++   E N FV  ++++ Y+K G +  A ++F S+S  +V  WNA++ GY+  G+  EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMY 291
           ++ + M  +G+ +D YT ++ +     V    +G  IHG IIR+  E    I  AL+D+Y
Sbjct: 209 DLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY 268

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTF 350
           +  + +D A +VF  M+ KDV +W  +  GFS  ++  +    F+K + +   + + +  
Sbjct: 269 VSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIAL 328

Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
             +L  C     L  G ++  LA+   F +   V S++I M+  CG +E A   F  +  
Sbjct: 329 MGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGE 388

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
           K++  WN +++G   N    D +  F  +  SG++ +  TF  V+  C  +       QI
Sbjct: 389 KDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQI 448

Query: 471 HGAIIKTGFSSCG---YICSSLIKSYVNFGQLDNSFEFSN 507
              ++KT         Y C  +I      GQLD ++ F N
Sbjct: 449 FYHMVKTSHVIPNLQHYAC--VIDILGRAGQLDAAYSFIN 486



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 179/379 (47%), Gaps = 12/379 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
            + + + ++  L    NL    +   VH   V+ GF  ++F++  L+ MYSK G  G   
Sbjct: 118 FKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVAR 177

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           ++F+ M+ERN+V+W  IVS    +G  +  + ++  M+  G + + + + S++   +S+G
Sbjct: 178 QLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVG 237

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             + G  IH F ++   E +  +  ++++ Y     V  A RVF  +S  DV  W  M+ 
Sbjct: 238 CLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLT 297

Query: 220 GYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
           G++   +   A+   + ML  + + +D    +  L  CS       GR++H L I++   
Sbjct: 298 GFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFA 357

Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
            +I + +A+IDMY     ++ A + F  M +KDV+ WN +  G   N        LF + 
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC----- 393
             SG  P+  TF  +L  C        G+  + L +    +   +V  +L +  C     
Sbjct: 418 KGSGLDPDESTFVSVLYACSH-----AGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDIL 472

Query: 394 -RCGAVEMAHSVFDNVSYK 411
            R G ++ A+S  +N+ ++
Sbjct: 473 GRAGQLDAAYSFINNMPFQ 491



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/350 (21%), Positives = 160/350 (45%), Gaps = 3/350 (0%)

Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
           KL DL    Q+    +  G      +++SL+  +  CG +  A  +F +  YKN+ +W  
Sbjct: 33  KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92

Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           L+SG   N C  + +  F  +     + N  T   V+         ++   +H   ++ G
Sbjct: 93  LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
           F    ++ ++L+  Y  FG +  + +        ++ +W A++S     G + EA+ +F+
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212

Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
            +   G   D Y + +++ +  ++G  Q    IH F+I+ G+  + ++ +A++D Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSV 657
            +  A   F +  +  DV  +  ++  ++       A++ F+KM  + NL+      + +
Sbjct: 273 CVDDAHRVFSE-MSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGI 331

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
           +S+CSH G + +G  +  ++  +     +      ++DM +  G LEDAK
Sbjct: 332 LSSCSHSGALQQGRRV-HALAIKTCFANNIFVGSAVIDMYANCGNLEDAK 380


>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 173/615 (28%), Positives = 300/615 (48%), Gaps = 36/615 (5%)

Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
           V+  C +      G  IH   LK  +  N FV  S+++ YAK G +  A ++F  +    
Sbjct: 48  VLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKT 107

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  W +M+ G+   G   E +++   ML E +  ++YT    LQ C+   D  + + IH 
Sbjct: 108 VVSWTSMMSGHCQRGAFDEVISIFWRML-ETLQPNEYTLAVILQACAQKRDLKLVQLIHC 166

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            II++       + N+LID Y KS  +  A K+ +R+  +DV+SW ++  G   N    +
Sbjct: 167 HIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEK 226

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
               F +    G  PN VT   +L+ C  + +  +   +  L +   + +   V +SL+ 
Sbjct: 227 ALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVE 286

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+   G  +    +F N               +CF   D   L T              T
Sbjct: 287 MYSINGYFKEGFQIFCN---------------FCFE-GDGQYLSTE-------------T 317

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE 510
              +++ C  S+  ++  QIHG  IK GF  C  + +SLI  Y    + D +F+      
Sbjct: 318 IATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMS 377

Query: 511 RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK----PDEYILGTILNSCAAIGAYQ 566
             D+ SW  M+S+LV    +++A+ +   +   G      PD   +   + +C+++ + Q
Sbjct: 378 CRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQ 437

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             + IH ++ + G   +++V ++++D Y KCG +  A     +     D+  +N+LI AY
Sbjct: 438 LGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAE-KVSEEMPVRDLGSWNSLIAAY 496

Query: 627 AHHGLVSEAMEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQP 685
             +G    A+ +F ++K     +P+  TF +++SAC+H GLV +G  +FKSM  +Y ++P
Sbjct: 497 GINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEP 556

Query: 686 SPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKL 745
             + + C+VD+L R G LE+A+  I+ MPF+P P V+ +LL GC + GN ++ E  ++KL
Sbjct: 557 RIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKL 616

Query: 746 LLLLPKNDAAHVLLS 760
            +L PK+ A  V LS
Sbjct: 617 YILEPKSRAWRVALS 631



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 235/507 (46%), Gaps = 35/507 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG+ +H +I+K G   ++F+ N+L+ MY+KCG      ++FD M ++ +VSWT ++S   
Sbjct: 60  LGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHC 119

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G FD  + ++  M      PNE+ +  +++ C      +    IHC  +K     + F
Sbjct: 120 QRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAF 178

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  S+++ Y K G + AAE++   +   DV  W ++I G    G   +AL     M  +G
Sbjct: 179 LQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQEDG 238

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           ++ +  T ++ LQ CSL+ ++ + + +HGL++++E   ++ ++N+L++MY  +      F
Sbjct: 239 VSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVFVMNSLVEMYSINGYFKEGF 298

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F           N  F G                    G   +  T + LL+ C    
Sbjct: 299 QIF----------CNFCFEG-------------------DGQYLSTETIATLLQGCSHSK 329

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG Q+    +  GF     V +SLIYM+      + A  +F  +S ++I +WN ++S
Sbjct: 330 CLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMIS 389

Query: 422 GYCFNCCDADVLKTFCNIWESG----VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
                      L     +  +G    +  +  T    ++ C    + Q+   IHG I + 
Sbjct: 390 SLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRA 449

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
           G     ++ +SL+  Y   G+L  + + S      D+ SW ++++A    G+   A+ +F
Sbjct: 450 GLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVF 509

Query: 538 HSLVEAG-EKPDEYILGTILNSCAAIG 563
             L   G  +P+      IL++CA  G
Sbjct: 510 KQLKNTGAHRPNAITFTNILSACAHAG 536



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 113/495 (22%), Positives = 216/495 (43%), Gaps = 39/495 (7%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D  T +  L  C+   D  +G  IH  I++S +  ++ + N+L+DMY K   ++ A K+F
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M DK V+SW ++  G  +     +  S+F + +L   +PN  T +++L+ C +  DL 
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWR-MLETLQPNEYTLAVILQACAQKRDLK 159

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           L   + C  +  GF+ +  + +SLI  + + G +  A  +   +  +++ +W  ++SG  
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCV 219

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      L  F  + E GV  N  T   +++ C      Q+   +HG ++K  +    +
Sbjct: 220 LNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRENVF 279

Query: 485 ICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
           + +SL++ Y   G     F+ F N     D                              
Sbjct: 280 VMNSLVEMYSINGYFKEGFQIFCNFCFEGD------------------------------ 309

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
           G+      + T+L  C+     +  + IH + IK GF     V +++I  YA+      A
Sbjct: 310 GQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAA 369

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN----LQPSQATFVSVMS 659
              F +  +  D++ +NT+I +        +A+ +  ++        + P   T ++ + 
Sbjct: 370 FQLF-RKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQ 428

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           ACS    +  G ++   + ++ G+         LVDM  + G L  A+ V E MP +   
Sbjct: 429 ACSSLASLQLGQVIHGYI-TRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLG 487

Query: 720 TVYRSLLSGCRIHGN 734
           + + SL++   I+GN
Sbjct: 488 S-WNSLIAAYGINGN 501



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 46/369 (12%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG ++K  +  ++F+ N+L+ MYS  GYF  G ++F                    N  
Sbjct: 265 VHGLVMKAEWRENVFVMNSLVEMYSINGYFKEGFQIF-------------------CNFC 305

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
           F+ G   Y+  +T         + ++++ C      + G  IH + +K        V  S
Sbjct: 306 FE-GDGQYLSTET---------IATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCTIVENS 355

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG---- 241
           ++  YA+     AA ++F  +S  D+  WN MI         ++AL ++S +   G    
Sbjct: 356 LIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDM 415

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  T + ++Q CS +A   +G+ IHG I R+ + C I + N+L+DMY K   +  A 
Sbjct: 416 IYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAE 475

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKL 360
           KV E M  +D+ SWN+L   +  N N     ++F +   +G+ RPN +TF+ +L  C   
Sbjct: 476 KVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAH- 534

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFDNVSYK-NI 413
                GL  +   +      E ++   + +  C      R G +E A +    + ++   
Sbjct: 535 ----AGLVAEGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGP 590

Query: 414 TTWNELLSG 422
             W  LL G
Sbjct: 591 EVWGALLGG 599



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 128/267 (47%), Gaps = 7/267 (2%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+HG+ +K GF     ++N+LI MY++        ++F +M+ R++VSW  ++S+ +
Sbjct: 333 LGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLV 392

Query: 122 QNGEFDMGLKMYVDMKTNG----FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
           +       L +  ++ +NG      P+   + + ++ C S+ + + G  IH +  +  + 
Sbjct: 393 KGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLI 452

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
            + FV  S+++ Y K G +  AE+V   +   D+G WN++I  Y   G G  ALNV   +
Sbjct: 453 CDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQL 512

Query: 238 LFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSS 295
              G    +  TF N L  C+       G +I   + R   +E  I     ++D+  ++ 
Sbjct: 513 KNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMVDLLGRAG 572

Query: 296 GMDYAFKVFERMA-DKDVISWNTLFGG 321
            ++ A    ++M  +     W  L GG
Sbjct: 573 RLEEAEAFIQKMPFEPGPEVWGALLGG 599



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 14/190 (7%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D + +  S+    +L S  LG  +HG+I + G   DIF+QN+L+ MY KCG      +V 
Sbjct: 419 DFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVS 478

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGAS 161
           +EM  R+L SW  +++A   NG     L ++  +K  G   PN     +++  C   G  
Sbjct: 479 EEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLV 538

Query: 162 EFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD-VGCWN 215
             G+ I       ++L+ RIE      C V +   + G +  AE     +  +     W 
Sbjct: 539 AEGFEIFKSMKREYSLEPRIEH---FACMV-DLLGRAGRLEEAEAFIQKMPFEPGPEVWG 594

Query: 216 AMIGGYAHCG 225
           A++GG   CG
Sbjct: 595 ALLGG---CG 601


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 252/467 (53%), Gaps = 4/467 (0%)

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M YA  +F+++  K+   WN++  G++ N +P +   L+ K +  G +P++ T+  +L+ 
Sbjct: 74  MPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKA 133

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
           CG LL  ++G ++  L +  G  ++  V +S++ M+ + G VE A  VFD +  +++T+W
Sbjct: 134 CGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSW 193

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++SG+  N       + F ++   G   +  T   ++  C    + ++  +IHG +++
Sbjct: 194 NTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVR 253

Query: 477 TGFSS--C-GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEA 533
            G S   C G++ +S+I  Y N   +  + +   G    D+ SW +++S     G   +A
Sbjct: 254 NGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQA 313

Query: 534 VTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDA 593
           + +F  +V  G  PDE  + ++L +C  I A +   ++  +V+K G+   V V +A+I  
Sbjct: 314 LELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGM 373

Query: 594 YAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT 653
           YA CG +  A   FD+    N +     ++  +  HG   EA+ IF +M    + P +  
Sbjct: 374 YANCGSLVCACRVFDEMPEKN-LPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGI 432

Query: 654 FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           F +V+SACSH GLVD+G  +F  M   Y ++P P  Y CLVD+L R GYL++A  VIE M
Sbjct: 433 FTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM 492

Query: 714 PFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
             +P+  V+ +LLS CR+H N +L   +++KL  L P   + +V LS
Sbjct: 493 KLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLS 539



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 198/410 (48%), Gaps = 4/410 (0%)

Query: 56  NLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           N KS     Q+H H+   G    + +L   L A Y+ CG+  +   +FD++  +N   W 
Sbjct: 34  NSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWN 93

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            ++     N      L +Y+ M   G  P+ F    V+K C  +   E G  +H   +  
Sbjct: 94  SMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVG 153

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
            +E++ +VG S+L+ Y K GDV AA  VF  +   D+  WN M+ G+   G    A  V 
Sbjct: 154 GLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVF 213

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR---SEVECSISIVNALIDMY 291
             M  +G   D+ T +  L  C  V D  +G++IHG ++R   S   C+  ++N++IDMY
Sbjct: 214 GDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMY 273

Query: 292 IKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFS 351
                +  A K+FE +  KDV+SWN+L  G+ +  +  Q   LF + ++ G+ P+ VT  
Sbjct: 274 CNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVI 333

Query: 352 ILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
            +L  C ++  L LG  +Q   +  G++    V ++LI M+  CG++  A  VFD +  K
Sbjct: 334 SVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEK 393

Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
           N+     +++G+  +    + +  F  +   GV  +   F  V+  C  S
Sbjct: 394 NLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 184/373 (49%), Gaps = 7/373 (1%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L  R +G +VH  +V  G   D+++ N++++MY K G       VFD M  R+L SW  
Sbjct: 136 DLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNT 195

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
           ++S  ++NGE     +++ DM+ +GF+ +   + +++  C  +   + G  IH + ++  
Sbjct: 196 MMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG 255

Query: 176 IEK---NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
                 N F+  S+++ Y     V+ A ++F  +   DV  WN++I GY  CG  F+AL 
Sbjct: 256 ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALE 315

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           +   M+  G   D+ T I+ L  C+ ++   +G  +   +++     ++ +  ALI MY 
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYA 375

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
               +  A +VF+ M +K++ +   +  GF  +    +  S+F++ +  G  P+   F+ 
Sbjct: 376 NCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTA 435

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT--SSLIYMFCRCGAVEMAHSVFDNVSY 410
           +L  C     +D G ++    +   +  E   T  S L+ +  R G ++ A++V +N+  
Sbjct: 436 VLSACSHSGLVDEGKEI-FYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKL 494

Query: 411 K-NITTWNELLSG 422
           K N   W  LLS 
Sbjct: 495 KPNEDVWTALLSA 507



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 9/273 (3%)

Query: 62  LGTQVHGHIVKLGFTNDI---FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
           +G ++HG++V+ G +  +   FL N++I MY  C       ++F+ +  +++VSW  ++S
Sbjct: 243 VGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLIS 302

Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
              + G+    L+++  M   G +P+E  V SV+  C  + A   G ++  + +K     
Sbjct: 303 GYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV 362

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           N  VG +++  YA  G +  A RVF  +   ++     M+ G+   G G EA+++   ML
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGM 297
            +G+T D+  F   L  CS     D G++I   + R   VE   +  + L+D+  ++  +
Sbjct: 423 GKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYL 482

Query: 298 DYAFKVFERM---ADKDVISWNTLFGGFSENKN 327
           D A+ V E M    ++DV  W  L      ++N
Sbjct: 483 DEAYAVIENMKLKPNEDV--WTALLSACRLHRN 513



 Score = 44.7 bits (104), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 18/189 (9%)

Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMA 606
           D    GT+L S     +  +   +H  V   G      Y+A+ +   YA CG +  A+  
Sbjct: 21  DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80

Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
           FDQ    N  + +N++I  YA +   S A+ ++ KM     +P   T+  V+ AC     
Sbjct: 81  FDQIVLKNSFL-WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKAC----- 134

Query: 667 VDKGCLLFKSMDSQY-------GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
              G LL + M  +        G++        ++ M  + G +E A+ V + M  +   
Sbjct: 135 ---GDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVR-DL 190

Query: 720 TVYRSLLSG 728
           T + +++SG
Sbjct: 191 TSWNTMMSG 199


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 158/559 (28%), Positives = 273/559 (48%), Gaps = 64/559 (11%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            +++H LII+S       + N LI+ Y K   + YA  VF++M   +  SWNT+   +S+
Sbjct: 24  AKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSK 83

Query: 325 ---------------NKNPGQTASLFHKFILSGS-----------------RPNHVTFSI 352
                          N++     SL   ++  GS                   N +TFS 
Sbjct: 84  SGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFST 143

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L        +DLG Q+    +  GF     V SSL+ M+ + G V +A  VFD V  +N
Sbjct: 144 MLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERN 203

Query: 413 IT-------------------------------TWNELLSGYCFNCCDADVLKTFCNIWE 441
           +                                +W  +++G   N  +A+ +  F ++ +
Sbjct: 204 VVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQ 263

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            G+ ++  TF  V+  C      +   +IH  II++G++   ++ S+L+  Y     +  
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +          ++ SW AM+      G + EAV +F  +   G +PD++ LG++++SCA 
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           + + +     H   +  G  + + V++A+I  Y KCG I+ +   FD+  +  D + +  
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDE-MSFRDEVSWTA 442

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           L+  YA  G  +E +++F++M +  L+P   TF++V+SACS  GLV++G   F+SM   +
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
           G+ P  D Y C++D+  R G LE+AK+ I  MPF P    + +LLS CR++GN+E+G+WA
Sbjct: 503 GIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWA 562

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +E LL L P+N A ++LLS
Sbjct: 563 AESLLELDPQNPAGYILLS 581



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 249/567 (43%), Gaps = 78/567 (13%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           +++    ++H  I+K     + FL NNLI  YSK G   +   VFD+M + N  SW  ++
Sbjct: 19  RNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTML 78

Query: 118 SAAIQNGEFDM-------------------------------GLKMYVDMKTNGFMP-NE 145
           SA  ++G+                                   +K Y  M  +G +  N 
Sbjct: 79  SAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNR 138

Query: 146 FAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA------ 199
               +++ +  S G  + G  IH   +K       FVG S+++ YAK+G V+ A      
Sbjct: 139 ITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDE 198

Query: 200 -------------------------ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
                                    +R+F+ +   D   W  MI G    G   EA+++ 
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             M  EG+ MD+YTF + L  C  +     G++IH LIIRS    ++ + +AL+DMY K 
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKC 318

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             + YA  VF+RMA+K+V+SW  +  G+ +N    +   +F     +G  P+  T   ++
Sbjct: 319 RSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVI 378

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
             C  L  L+ G Q  C AL  G +    V+++LI ++ +CG++E ++ +FD +S+++  
Sbjct: 379 SSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV 438

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI 470
           +W  L+SGY       + +  F  +   G++ +  TF  V+  C R+      QQ    +
Sbjct: 439 SWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESM 498

Query: 471 ---HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSALVH 526
              HG I  +   +C      +I  +   G+L+ +  F N      D   W  ++S+   
Sbjct: 499 LKDHGIIPFSDHYTC------MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRL 552

Query: 527 QGHNHEAVTIFHSLVEAG-EKPDEYIL 552
            G+         SL+E   + P  YIL
Sbjct: 553 YGNEEIGKWAAESLLELDPQNPAGYIL 579



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/553 (24%), Positives = 252/553 (45%), Gaps = 53/553 (9%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           + N F   ++L+ Y+K GD++  + +F  + + D   WN++I GY   G   EA+   +S
Sbjct: 68  QPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNS 127

Query: 237 MLFEGI-TMDKYTFINAL-----QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
           M+ +G+  +++ TF   L     QGC      D+GRQIHG I++      + + ++L+DM
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGC-----VDLGRQIHGQIVKFGFGAYVFVGSSLVDM 182

Query: 291 YIKSSGMDYAFKVFER-------------------------------MADKDVISWNTLF 319
           Y K   +  A +VF+                                M ++D ISW T+ 
Sbjct: 183 YAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMI 242

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
            G  +N    +   LF      G   +  TF  +L  CG L  L  G ++  L +  G+ 
Sbjct: 243 TGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYN 302

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
               V S+L+ M+C+C +V  A +VF  ++ KN+ +W  +L GY  N    + ++ FC++
Sbjct: 303 HNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDM 362

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
             +G+E +  T   V+ +C    + +   Q H   + +G  S   + ++LI  Y   G +
Sbjct: 363 QRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSI 422

Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
           ++S +  +     D  SW A++S     G  +E + +F  ++  G KPD      +L++C
Sbjct: 423 EDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSAC 482

Query: 560 AAIGAYQRTKSIHPFVIK----LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
           +  G  +R +     ++K    + F+      + +ID + + G ++ A+   ++   S D
Sbjct: 483 SRAGLVERGQQYFESMLKDHGIIPFSDHY---TCMIDLFGRAGRLEEAKNFINKMPFSPD 539

Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATFVSVMSACSHKGLVDKGCLLF 674
            I + TL+ +   +G  +E +  +    L  L P   A ++ + S  + KG       L 
Sbjct: 540 SIGWATLLSSCRLYG--NEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLR 597

Query: 675 KSMDSQYGMQPSP 687
           + M  + G +  P
Sbjct: 598 RGMREK-GARKEP 609



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 202/423 (47%), Gaps = 33/423 (7%)

Query: 32  NQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK 91
           N    D  L  + I  +  L L  +     LG Q+HG IVK GF   +F+ ++L+ MY+K
Sbjct: 126 NSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAK 185

Query: 92  CGYFGWGLRVFDEMAERNLV-------------------------------SWTLIVSAA 120
            G      +VFDE+ ERN+V                               SWT +++  
Sbjct: 186 MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGL 245

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           IQNG     + ++ DM+  G   +++  GSV+  C  + A + G  IH   ++     N 
Sbjct: 246 IQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNV 305

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           FVG ++++ Y K   V  AE VF  +++ +V  W AM+ GY   G+  EA+ V   M   
Sbjct: 306 FVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRN 365

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  D +T  + +  C+ +A  + G Q H   + S +   I++ NALI +Y K   ++ +
Sbjct: 366 GIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDS 425

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++F+ M+ +D +SW  L  G+++     +T  LF + ++ G +P+ VTF  +L  C + 
Sbjct: 426 NQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRA 485

Query: 361 LDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNE 418
             ++ G Q  + +    G +   +  + +I +F R G +E A +  + + +  +   W  
Sbjct: 486 GLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWAT 545

Query: 419 LLS 421
           LLS
Sbjct: 546 LLS 548


>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
 gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
          Length = 604

 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 153/601 (25%), Positives = 288/601 (47%), Gaps = 58/601 (9%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           D+  WN+M+  Y+  G+G E L +   M  E    D  T+ + L  CS +   ++G+++H
Sbjct: 3   DLISWNSMVVAYSQHGHGEEMLELFRKMDVEP---DSITYASILGACSAMELLELGKEVH 59

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE------------------------ 305
             + RS  +   ++  ALI+MY K   ++ A +VF+                        
Sbjct: 60  ARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAR 119

Query: 306 -------------------------RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
                                    RM  K V +WN +   ++++    ++  LFH+  L
Sbjct: 120 EALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSL 179

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G +P+  TF  ++  C  L  L+ G  ++  A   G    E   ++L+ ++ +CG +E 
Sbjct: 180 EGVKPDARTFVSVIGACSSLQALEKGRAVEEQATSMGI---EEGRTALLSLYAKCGNLEA 236

Query: 401 AHSVFDNVSY-KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
           A  +FD + Y KN+ +WN +++ Y  +    + L+ +  + E GV+ +  T+   +  C 
Sbjct: 237 ARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACT 296

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
                    +IH  I ++   +  ++ ++++  Y   G+L+ +  +     R +  +W A
Sbjct: 297 SYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSA 356

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL- 578
           M+ A +  G++ EA+ ++  +V  G +P E  L   L +C+ IGA Q  K+IH  +    
Sbjct: 357 MVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATE 416

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
                +++ +++++ YAKCG +  A   F  +    D   +NT+I+ +AHHG V E + +
Sbjct: 417 TLQNCLFLQNSLLNMYAKCGCLAIANTMFS-NLQRRDSFSWNTIIVGHAHHGDVDEVLSL 475

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
             +M    + P   TF  V+ ACSH GL+D+G   F SM+ ++G+    + Y C+VD+LS
Sbjct: 476 HGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGVAHDTEHYLCMVDLLS 535

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G +E A+ ++  MP++P    + +LL    +  + + G   +E    L P + +++VL
Sbjct: 536 RAGRVESAEELVHSMPYEPPAMGWTTLLGSSEVQADLDRGSRYAEVAAGLEPGSSSSYVL 595

Query: 759 L 759
           L
Sbjct: 596 L 596



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 210/475 (44%), Gaps = 64/475 (13%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +  D I  A  L     ++   LG +VH  + +  F +D  L   LI MYSKCG      
Sbjct: 32  VEPDSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESAR 91

Query: 100 RVFD-------------------------------------------------EMAERNL 110
           RVFD                                                  M ++++
Sbjct: 92  RVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKASRSNFDRMEKKSV 151

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
            +W  ++S+  Q+G+    L ++  M   G  P+     SV+  C S+ A E G ++   
Sbjct: 152 TAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVSVIGACSSLQALEKGRAVEEQ 211

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFE 229
           A  + IE+      ++L+ YAK G++ AA  +F  +    +V  WN+MI  YA  G G E
Sbjct: 212 ATSMGIEEGR---TALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGRE 268

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL +   M  EG+  D  T+  AL  C+       G +IH  I  S++   + +  A+++
Sbjct: 269 ALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVN 328

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   ++ A   FE+M  K+ ++W+ + G F ++    +   L+ + +  G +P+ +T
Sbjct: 329 MYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEIT 388

Query: 350 FSILLRQCGKLLDLDLG------LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
            +  L  C ++  L  G      +Q      +C FL      +SL+ M+ +CG + +A++
Sbjct: 389 LAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQ-----NSLLNMYAKCGCLAIANT 443

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
           +F N+  ++  +WN ++ G+  +    +VL     + + GV+ +  TF  V+  C
Sbjct: 444 MFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLAC 498



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/555 (21%), Positives = 236/555 (42%), Gaps = 70/555 (12%)

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
           +++L+SW  +V A  Q+G  +  L+++  M      P+     S++  C +M   E G  
Sbjct: 1   DKDLISWNSMVVAYSQHGHGEEMLELFRKMDVE---PDSITYASILGACSAMELLELGKE 57

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD---------------- 210
           +H    + R + +P +  +++N Y+K G + +A RVF  I S D                
Sbjct: 58  VHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGR 117

Query: 211 ---------------------------------VGCWNAMIGGYAHCGYGFEALNVVSSM 237
                                            V  WNAMI  YA  G   ++L +   M
Sbjct: 118 AREALGLFERMKAESVRIDKASRSNFDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQM 177

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI---VNALIDMYIKS 294
             EG+  D  TF++ +  CS +   + GR +       E   S+ I     AL+ +Y K 
Sbjct: 178 SLEGVKPDARTFVSVIGACSSLQALEKGRAVE------EQATSMGIEEGRTALLSLYAKC 231

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
             ++ A  +F+++   K+V+SWN++   ++++    +   L+      G +P+ +T++  
Sbjct: 232 GNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGA 291

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L  C        G+++           +  + ++++ M+ +CG +E A S F+ +  KN 
Sbjct: 292 LGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNA 351

Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGA 473
            TW+ ++  +  +  D + L  +  +   G + +  T    +  C R    Q    IH  
Sbjct: 352 VTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSR 411

Query: 474 IIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
           I  T    +C ++ +SL+  Y   G L  +    +  +R D  SW  ++    H G   E
Sbjct: 412 IQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDE 471

Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF----NTEVYVAS 588
            +++   +V+ G  PD      +L +C+  G   R +S H   +++ F    +TE Y+  
Sbjct: 472 VLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRS-HFLSMEMEFGVAHDTEHYL-- 528

Query: 589 AVIDAYAKCGDIKGA 603
            ++D  ++ G ++ A
Sbjct: 529 CMVDLLSRAGRVESA 543



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 165/343 (48%), Gaps = 4/343 (1%)

Query: 82  QNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           +  L+++Y+KCG       +FD++  R N+VSW  +++A  Q+G     L++Y  MK  G
Sbjct: 221 RTALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEG 280

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
             P++      +  C S G S  G  IH    + +I  + F+  +++N YAK G++  A 
Sbjct: 281 VQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAM 340

Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVA 260
             F  +   +   W+AM+G +   GY  EAL++   M+ EG    + T   AL  CS + 
Sbjct: 341 SYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGALAACSRIG 400

Query: 261 DFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
               G+ IH  I  +E ++  + + N+L++MY K   +  A  +F  +  +D  SWNT+ 
Sbjct: 401 ALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDSFSWNTII 460

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL-QLQCLALHCGF 378
            G + + +  +  SL  + +  G  P++VTF+ +L  C     LD G      + +  G 
Sbjct: 461 VGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRSHFLSMEMEFGV 520

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT-WNELL 420
             +      ++ +  R G VE A  +  ++ Y+     W  LL
Sbjct: 521 AHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLL 563



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 139/292 (47%), Gaps = 5/292 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           +   +  ++ D I  A +L    +      G ++H  I +     D+FL   ++ MY+KC
Sbjct: 274 ELMKEEGVQPDDITYAGALGACTSYGGSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKC 333

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G     +  F++M  +N V+W+ +V A IQ+G     L +Y+ M + GF P+E  +   +
Sbjct: 334 GELETAMSYFEKMRRKNAVTWSAMVGAFIQHGYDREALDLYLRMVSEGFQPSEITLAGAL 393

Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKN-PFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
             C  +GA + G +IH         +N  F+  S+LN YAK G +A A  +F ++   D 
Sbjct: 394 AACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCLAIANTMFSNLQRRDS 453

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             WN +I G+AH G   E L++   M+ +G+  D  TF   L  CS     D GR  H L
Sbjct: 454 FSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFACVLLACSHAGLLDRGRS-HFL 512

Query: 272 IIRSEVECSISIVNAL--IDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFG 320
            +  E   +    + L  +D+  ++  ++ A ++   M  +   + W TL G
Sbjct: 513 SMEMEFGVAHDTEHYLCMVDLLSRAGRVESAEELVHSMPYEPPAMGWTTLLG 564


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 282/593 (47%), Gaps = 7/593 (1%)

Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF--EGITMDKYTFIN 251
           G++  A +VF  +   D+  W A+I GY       EA+ + S+M      ++ D      
Sbjct: 48  GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
            L+ C   ++   G  +H   +++ +  S+ + ++L+DMY +   ++ + +VF  M  ++
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRN 167

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
            ++W  +  G        +  + F +   S    +  TF+I L+ C  L  +  G Q+  
Sbjct: 168 AVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHT 227

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
             +  GF     V +SL  M+  CG +     +F+N+S +++ +W  L+  Y     +  
Sbjct: 228 HVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEK 287

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            ++TF  +  S V  N  TF  +   C          Q+H  +   G +    + +S++K
Sbjct: 288 AVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMK 347

Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
            Y   G+LD++     G    D+ SW  ++      G   EA   F  + ++G KP ++ 
Sbjct: 348 MYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFA 407

Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
           L ++L+    +   +  + +H      G      V S +I+ Y+KCG+IK A   F+++ 
Sbjct: 408 LASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEET- 466

Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGC 671
           + +D++    +I  YA HG   EA+++F+K       P   TF+SV++AC+H G +D G 
Sbjct: 467 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGF 526

Query: 672 LLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRI 731
             F  M  +Y M+P+ + YGC+VD+L R G L +A+ +I+ M ++    V+ +LL  C+ 
Sbjct: 527 HYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKA 586

Query: 732 HGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNVNDGIK 784
            G+ E G  A+E++L L P    A V L+       GNL   E   NV   +K
Sbjct: 587 KGDIERGRRAAERILELDPTCATALVTLAN-IYSSTGNL---EEAANVRKNMK 635



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 157/633 (24%), Positives = 284/633 (44%), Gaps = 29/633 (4%)

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT--NGFMPNEFAVGSVMKVCVS 157
           +VFD+M  R++VSWT I+   +     D  + ++  M+       P+   V  V+K C  
Sbjct: 55  QVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQ 114

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                +G S+H +A+K  +  + FVG S+L+ Y ++G +  + RVF  +   +   W A+
Sbjct: 115 SSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAI 174

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G  H G   E L   S M       D +TF  AL+ C+ +     G+QIH  +I    
Sbjct: 175 ITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGF 234

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ + N+L  MY +   M     +FE M+++DV+SW +L   ++   +  +    F K
Sbjct: 235 DATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIK 294

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
              S   PN  TF+ +   C  L  L  G QL C     G  D  +V++S++ M+  CG 
Sbjct: 295 MRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGK 354

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           ++ A  +F  +  ++I +W+ ++ GY       +  K F  + +SG +    T F +   
Sbjct: 355 LDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKP---TDFALASL 411

Query: 458 CCRSENQQMV---GQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
              S N  ++    Q+H      G      + S+LI  Y   G +  + +     +R D+
Sbjct: 412 LSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDI 471

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            S  AM++     G + EA+ +F   ++ G  PD     ++L +C   G  Q     H F
Sbjct: 472 VSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSG--QLDLGFHYF 529

Query: 575 -VIKLGFN----TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            +++  +N     E Y    ++D   + G +  A    D+     D +V+ TL++A    
Sbjct: 530 NLMQEKYNMRPAKEHY--GCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAK 587

Query: 630 GLVSEAMEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP- 687
           G +       +  ++  L P+ AT  V++ +  S  G +++   + K+M ++ G+   P 
Sbjct: 588 GDIERGRRAAE--RILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAK-GVIKEPG 644

Query: 688 -------DCYGCLVDMLSRNGYLEDAKHVIEIM 713
                  DC    V     +   ED  +++E++
Sbjct: 645 WSSIKIKDCVSAFVSGDRFHPLSEDIYNILELV 677



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/521 (23%), Positives = 224/521 (42%), Gaps = 43/521 (8%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H + VK    + +F+ ++L+ MY + G      RVF EM  RN V+WT I++  + 
Sbjct: 121 GESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVH 180

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G +  GL  + +M ++  + + F     +K C  +   ++G  IH   +    +   +V
Sbjct: 181 AGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWV 240

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+   Y + G++     +F ++S  DV  W ++I  Y   G+  +A+     M    +
Sbjct: 241 ANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQV 300

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             ++ TF      C+ ++    G Q+H  +    +  S+S+ N+++ MY     +D A  
Sbjct: 301 PPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASV 360

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +F+ M  +D+ISW+T+ GG+S+     +    F     SG +P     + LL   G +  
Sbjct: 361 LFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAV 420

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+ G Q+  LA   G      V S+LI M+ +CG ++ A  +F+     +I +   +++G
Sbjct: 421 LEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMING 480

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  +    + +  F    + G   +  TF  V+  C  S                     
Sbjct: 481 YAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHS--------------------- 519

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSN-GAERLDMAS----WGAMMSALVHQGHNHEAVTIF 537
                         GQLD  F + N   E+ +M      +G M+  L   G   EA  + 
Sbjct: 520 --------------GQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMI 565

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
               E   K D+ +  T+L +C A G  +R +     +++L
Sbjct: 566 D---EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILEL 603



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 180/380 (47%), Gaps = 2/380 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    A +L     L+    G Q+H H++  GF   +++ N+L  MY++CG    GL +F
Sbjct: 202 DTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLF 261

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           + M+ER++VSWT ++ A  + G  +  ++ ++ M+ +   PNE    ++   C S+    
Sbjct: 262 ENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLV 321

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
           +G  +HC    + +  +  V  S++  Y+  G + +A  +F  +   D+  W+ +IGGY+
Sbjct: 322 WGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYS 381

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G+G EA    S M   G     +   + L     +A  + GRQ+H L     +E + +
Sbjct: 382 QAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNST 441

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + + LI+MY K   +  A K+FE     D++S   +  G++E+    +   LF K +  G
Sbjct: 442 VRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 501

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
             P+ VTF  +L  C     LDLG      +         +     ++ + CR G +  A
Sbjct: 502 FSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEA 561

Query: 402 HSVFDNVSY-KNITTWNELL 420
             + D +S+ K+   W  LL
Sbjct: 562 EKMIDEMSWKKDDVVWTTLL 581



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 213/447 (47%), Gaps = 10/447 (2%)

Query: 272 IIRSEVECSISIV----NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN 327
           ++   VE +I +V    N+ +   I +  +  A +VF++M  +D++SW  +  G+    N
Sbjct: 21  LLEKPVEKTIQVVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANN 80

Query: 328 PGQTASLFH--KFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
             +   LF   + +     P+    S++L+ CG+  ++  G  L   A+    L    V 
Sbjct: 81  SDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVG 140

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           SSL+ M+ R G +E +  VF  + ++N  TW  +++G        + L  F  +  S   
Sbjct: 141 SSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEEL 200

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF-E 504
            +  TF   ++ C      +   QIH  +I  GF +  ++ +SL   Y   G++ +    
Sbjct: 201 SDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCL 260

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
           F N +ER D+ SW +++ A    GH  +AV  F  +  +   P+E    T+ ++CA++  
Sbjct: 261 FENMSER-DVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSR 319

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
               + +H  V  LG N  + V+++++  Y+ CG +  A + F Q     D+I ++T+I 
Sbjct: 320 LVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLF-QGMRCRDIISWSTIIG 378

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
            Y+  G   EA + F  M+ +  +P+     S++S   +  +++ G  +  ++   +G++
Sbjct: 379 GYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV-HALAFCFGLE 437

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIE 711
            +      L++M S+ G +++A  + E
Sbjct: 438 QNSTVRSTLINMYSKCGNIKEASKIFE 464


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 259/494 (52%), Gaps = 2/494 (0%)

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
           QIH  ++ S ++ +  ++  L++       + YA K+F+     DV  WN +   +S N 
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
               T  ++     +G  P+  TF  +L+ C +LLD  L   +    +  GF  +  V +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
            L+ ++ +CG + +A  VFD + ++ I +W  ++SGY  N    + L+ F  +  +GV+ 
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253

Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
           +      ++      ++ +    IHG +IK G      +  SL   Y   G +  +  F 
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313

Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
           +  +  ++  W AM+S     GH  EAV +FH ++    KPD   + + + + A +G+ +
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373

Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
             + +  +V K  + ++++V +++ID YAKCG ++ AR  FD++ +  DV++++ +IM Y
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRN-SDKDVVMWSAMIMGY 432

Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPS 686
             HG   EA+ ++  MK A + P+  TF+ +++AC+H GLV +G  LF  M   + + P 
Sbjct: 433 GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPR 491

Query: 687 PDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
            + Y C+VD+L R GYL +A   I  +P +P  +V+ +LLS C+I+    LGE+A+ KL 
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLF 551

Query: 747 LLLPKNDAAHVLLS 760
            L P N   +V LS
Sbjct: 552 SLDPYNTGHYVQLS 565



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/292 (35%), Positives = 165/292 (56%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG I+K GF +D+F+QN L+A+Y+KCG+ G    VFD +  R +VSWT I+S   QNG+
Sbjct: 176 IHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGK 235

Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
               L+M+  M+ NG  P+  A+ S+++    +   E G SIH F +K+ +E  P +  S
Sbjct: 236 AVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLIS 295

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           +  FYAK G V  A+  F  + + +V  WNAMI GYA  G+  EA+N+   M+   I  D
Sbjct: 296 LTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPD 355

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             T  +A+   + V   ++ + +   + +S     I +  +LIDMY K   +++A +VF+
Sbjct: 356 SVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFD 415

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
           R +DKDV+ W+ +  G+  +    +  +L+H    +G  PN VTF  LL  C
Sbjct: 416 RNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 158/654 (24%), Positives = 285/654 (43%), Gaps = 51/654 (7%)

Query: 23  KRIHRLCGNNQFCSDSFLRKDPIFLAKSL--SLSENLKSRVLGTQVHGHIVKLGFTNDIF 80
           K +  LC ++    + F+  D  F + S   SL +N   +    Q+H  +V  G  ++ F
Sbjct: 30  KFVKYLCFSSALHPEHFVNHDHCFNSDSFYASLIDNSTHKRHLDQIHNRLVISGLQHNGF 89

Query: 81  LQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG 140
           L   L+   S  G   +  ++FDE    ++  W  I+ +  +N  +   ++MY  M+  G
Sbjct: 90  LMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTG 149

Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYS--IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
             P+ F    V+K C  +   +FG S  IH   +K     + FV   ++  YAK G +  
Sbjct: 150 VHPDGFTFPYVLKACTEL--LDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGV 207

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A+ VF  +    +  W ++I GYA  G   EAL + S M   G+  D    ++ L+  + 
Sbjct: 208 AKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTD 267

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
           V D + GR IHG +I+  +E   +++ +L   Y K   +  A   F++M   +VI WN +
Sbjct: 268 VDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAM 327

Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
             G+++N +  +  +LFH  I    +P+ VT    +    ++  L+L   +        +
Sbjct: 328 ISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNY 387

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
             +  V +SLI M+ +CG+VE A  VFD  S K++  W+ ++ GY  +    + +  +  
Sbjct: 388 GSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHV 447

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           + ++GV  N  TF  ++  C            H  ++K G+         L     +F  
Sbjct: 448 MKQAGVFPNDVTFIGLLTACN-----------HSGLVKEGW--------ELFHCMKDFEI 488

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +  +  +S   + L  A +     A + +      V+++ +L+ A +          +  
Sbjct: 489 VPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACK----------IYR 538

Query: 559 CAAIGAYQRTK--SIHPFVIKLGFNTEVYVASAVIDAYAKCGD-IKGARMAFDQSFNSND 615
           C  +G Y   K  S+ P      +NT  YV  + + A +   D +   R+   +   + D
Sbjct: 539 CVTLGEYAANKLFSLDP------YNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKD 592

Query: 616 ----VIVYNTLIMAYAHHGLVSEAM--EIFDKMKLANLQPSQATFVSVMSACSH 663
               VI  N  + A+ H G  S  M  EIFD+++    +  +  FV    +  H
Sbjct: 593 LGYSVIEINGKLQAF-HVGDKSHPMAKEIFDELQRLERRLKEVGFVPYTESVLH 645


>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
          Length = 671

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 309/622 (49%), Gaps = 15/622 (2%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H  A+K+    + ++  ++L  Y   G +A A  VF  +   +V  W+ +I   +  G
Sbjct: 23  AVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLG 82

Query: 226 YGFEALNVVSSMLFEG--ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
              +AL++ + ML  G     + +T    + GC+   D   G Q+H   ++  V+   S+
Sbjct: 83  VLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESV 142

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS---LFHKFIL 340
              L+DMY K   +  +++ F     + V+SW ++      + + G   +   LF K ++
Sbjct: 143 AGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLV 202

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               P + TFS +L+       L  G Q+    +  G   +  + ++L+ M+ RCG ++ 
Sbjct: 203 LKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDE 262

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
              +   + +   +    LL+ Y  N C+ + ++ F ++    + ++      +++ C  
Sbjct: 263 ITRLACRIRHDAFSR-TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++V +IH   +K  F     + ++++  Y   G + +S    N  E  D  SW A+
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++  V    + EA+  F  +V  G +   + + ++L +C+A  +      IH  V+KLG 
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV 441

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + +  V +A++  YAKCG ++ A   F+ S  +  +I +N LI +++ HG    A+++FD
Sbjct: 442 DDDTSVENALVTMYAKCGVVQVALKIFN-SMRNRGIISWNALITSFSQHGNEVAAIQLFD 500

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M+   + P   TFV ++S+CS  GLV +GC  FK M ++Y ++P  + Y C+VD+ +R 
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARA 560

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G   DA   I+ MP QP   V+ +LL+ CR+HGN +LG  A++K+L + P++ + +++LS
Sbjct: 561 GRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620

Query: 761 K--------RKRQREGNLLDHE 774
                     ++ R   LLD +
Sbjct: 621 SIHASIDMWDEKARNRTLLDFQ 642



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 271/627 (43%), Gaps = 40/627 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG  VKLG     +L NNL+  Y   G+      VFDEM  RN+VSW+++++A+ + G 
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83

Query: 126 FDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
               L ++  M   G    PN F V +++  C     +  G  +H  A+K+ ++++  V 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG---GYAHCGYGFEALNVVSSMLFE 240
            ++++ YAK G V ++ R F       V  W +MI     +   GY   A+ +   ML  
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +     TF   L+   +      G+Q+HG +++   E   ++  AL+ MY +  GMD  
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++  R+   D  S  +L   ++ N    +   +F   ++     +    + LL+ C  L
Sbjct: 264 TRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L +  ++ C AL   F  +  + ++++ ++ +CG +  +  VF+ +  K+  +W  LL
Sbjct: 323 GQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALL 382

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  N    + L  F  +   G+E +      V+  C  + +     QIH  ++K G  
Sbjct: 383 TCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVD 442

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L+  Y   G +  + +  N      + SW A++++    G+   A+ +F  +
Sbjct: 443 DDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMM 502

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            E    PD+Y    +L+SC+ +G                      VA         C   
Sbjct: 503 QEEMVCPDDYTFVGLLSSCSRMG---------------------LVAEG-------CEYF 534

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K  +  ++          Y  ++  +A  G  S+AM+  D M     QP Q  + +++++
Sbjct: 535 KQMKTKYNLEPKMEH---YTCMVDLFARAGRFSDAMKFIDAMP---CQPDQLVWEALLAS 588

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           C   G +D G +  K +       PSP
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSP 615



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 4/406 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  V G QVH   VKLG   D  +   L+ MY+KCG  G   R F    +R+++SWT ++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 118 SAAIQNGE---FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           +  + +G+    D  + ++  M      P       ++KV         G  +H   +K+
Sbjct: 179 ACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKM 238

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +P +G ++L  Y + G +    R+   I  D      +++  YA  G   EA+ V 
Sbjct: 239 GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFS-RTSLLTAYARNGCNMEAVRVF 297

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML   + +D+    + LQ CS +    + ++IH   +++       ++NA++ +Y K 
Sbjct: 298 RDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKC 357

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  +  VF  + +KD ISW  L   + +N    +    F + +  G   +    + +L
Sbjct: 358 GDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVL 417

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R C     L  G Q+    +  G  D+ +V ++L+ M+ +CG V++A  +F+++  + I 
Sbjct: 418 RACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGII 477

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +WN L++ +  +  +   ++ F  + E  V  +  TF  ++ +C R
Sbjct: 478 SWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSR 523



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 152/302 (50%), Gaps = 9/302 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWTLIVSA 119
           G QVHG +VK+G   D  L   L+AMY +CG    G+     +A R   +  S T +++A
Sbjct: 228 GKQVHGCLVKMGTEVDPALGTALLAMYGRCG----GMDEITRLACRIRHDAFSRTSLLTA 283

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             +NG     ++++ DM   G MP ++ A+ S+++VC S+G       IHC+ALK     
Sbjct: 284 YARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRL 342

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  +++  Y K GD+A++E VF ++ + D   W A++  Y       EAL     M+
Sbjct: 343 DTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMV 402

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            +G+    +   + L+ CS  +    G QIH  +++  V+   S+ NAL+ MY K   + 
Sbjct: 403 RKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A K+F  M ++ +ISWN L   FS++ N      LF         P+  TF  LL  C 
Sbjct: 463 VALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522

Query: 359 KL 360
           ++
Sbjct: 523 RM 524



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 213/479 (44%), Gaps = 17/479 (3%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG  ++     S  + N L+  Y     +  A  VF+ M  ++V+SW+ L    S  
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 326 KNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
              G   SLF   +  G   RPN  T + L+  C +  D   G Q+   A+  G  ++E+
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF-NCCDADVLKT----FCN 438
           V  +L+ M+ +CG V  +   F     +++ +W  +++  C  N  D+    T    F  
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA--CLVNHGDSGYRDTAIVLFKK 199

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +    V     TF  +++     E      Q+HG ++K G      + ++L+  Y   G 
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 499 LDNSFEFSNGAERL--DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +D   E +  A R+  D  S  ++++A    G N EAV +F  ++      D+  + ++L
Sbjct: 260 MD---EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLL 316

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
             C+++G  +  K IH + +K  F  +  + +A++  Y KCGDI  + + F+ +  + D 
Sbjct: 317 QVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFN-TLENKDT 375

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +  L+  Y  + L  EA+  F +M    L+ S     SV+ ACS    +  G  +   
Sbjct: 376 ISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           +  + G+         LV M ++ G ++ A  +   M  +     + +L++    HGN+
Sbjct: 436 V-VKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNR-GIISWNALITSFSQHGNE 492



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 55/97 (56%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  +VKLG  +D  ++N L+ MY+KCG     L++F+ M  R ++SW  ++++  Q
Sbjct: 429 GWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQ 488

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +G     ++++  M+     P+++    ++  C  MG
Sbjct: 489 HGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMG 525



 Score = 45.8 bits (107), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 5/172 (2%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +   +++H   +KLG     Y+ + ++ +Y   G +  AR  FD+    N V+ ++ LI 
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRN-VVSWSVLIA 76

Query: 625 AYAHHGLVSEAMEIFDKMKLANL--QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           A +  G++ +A+ +F  M       +P+  T  ++++ C+       G  +  S   + G
Sbjct: 77  ASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASA-VKLG 135

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           +       G LVDM ++ G +  +     + P Q S   + S+++    HG+
Sbjct: 136 VDEDESVAGTLVDMYAKCGRVGSSWRAFVLTP-QRSVLSWTSMIACLVNHGD 186


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  258 bits (659), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 153/564 (27%), Positives = 280/564 (49%), Gaps = 7/564 (1%)

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH 269
           DV  WN+++  +   G   +A   + SM+  G  ++  + ++ +  C    +   G  IH
Sbjct: 5   DVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIH 64

Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
            L ++  +   +++ NAL+DMY K   ++ + +VF+ M +++ +SWN+  G F      G
Sbjct: 65  ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYG 124

Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLI 389
               +F K       P  +T S LL    +L   DLG ++   ++      +  V +SL+
Sbjct: 125 DVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLV 184

Query: 390 YMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
            M+ + G++E A ++F+ +  +N+ +WN +++    N  + +  +   ++ +SG   N  
Sbjct: 185 DMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSI 244

Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
           T   V+  C R  + +M  QIH   I+ G     +I ++LI  Y   GQL  +      +
Sbjct: 245 TLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERS 304

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           E+ D+ S+  ++          E++ +F  +   G   D       L++C  +  ++  K
Sbjct: 305 EKDDV-SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGK 363

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH  +++   +   +++++++D Y K G +  A   F++     DV  +NT+I+ Y  H
Sbjct: 364 EIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNK-ITKKDVASWNTMILGYGMH 422

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G +  A E+F+ MK   L     ++++V++ACSH GLVDKG   F  M +Q  ++P    
Sbjct: 423 GQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMH 481

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           Y C+VD+L R G L     +I  MPF  +  V+ +LL  CRIHGN EL +WA+E L  L 
Sbjct: 482 YACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELK 541

Query: 750 PKNDAAHVLL----SKRKRQREGN 769
           P++   + L+    ++  R  E N
Sbjct: 542 PEHSGYYTLMINMYAETGRWNEAN 565



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 261/555 (47%), Gaps = 5/555 (0%)

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M ER++VSW  +VSA + NG F    +  V M  +GF  N  ++ SV+  C +    +FG
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
            SIH  A+K+ +     +  ++++ Y K GDV A+ +VF  +   +   WN+ IG + + 
Sbjct: 61  LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
           G+  + L +   M    +     T  + L     +  FD+GR++HG  I+  ++  I + 
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L+DMY K   ++ A  +FE+M D++V+SWN +     +N    +   L      SG  
Sbjct: 181 NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGEC 240

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           PN +T   +L  C ++  L +G Q+   ++  G + +  ++++LI M+ +CG + +A ++
Sbjct: 241 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 300

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F+  S K+  ++N L+ GY  +    + L  F  +   G++ +  +F   +  C      
Sbjct: 301 FER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF 359

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
           +   +IH  +++   S   ++ +SL+  Y   G L  + +  N   + D+ASW  M+   
Sbjct: 360 KHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGY 419

Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
              G    A  +F  +   G   D      +L +C+  G   + K     ++      + 
Sbjct: 420 GMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQ 479

Query: 585 YVASAVIDAYAKCGDI-KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
              + ++D   + G + K A +  D  F +N   V+  L+ A   HG +  A   +    
Sbjct: 480 MHYACMVDLLGRAGQLSKCAEIIRDMPFPANS-DVWGALLGACRIHGNIELAQ--WAAEH 536

Query: 644 LANLQPSQATFVSVM 658
           L  L+P  + + ++M
Sbjct: 537 LFELKPEHSGYYTLM 551



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 202/416 (48%), Gaps = 12/416 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H   VK+G    + L N L+ MY K G     ++VFD M E+N VSW   +   + 
Sbjct: 60  GLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 119

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
            G +   L+M+  M  +  MP    + S++   V +G+ + G  +H +++K  ++ + FV
Sbjct: 120 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFV 179

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
             S+++ YAK G +  A  +F  +   +V  WNAMI      G   EA  +V+ M   G 
Sbjct: 180 ANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGE 239

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             +  T +N L  C+ +A   +G+QIH   IR  +   + I NALIDMY K   +  A  
Sbjct: 240 CPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARN 299

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
           +FER ++KD +S+NTL  G+S++    ++  LF +    G   + V+F   L  C  L  
Sbjct: 300 IFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSV 358

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
              G ++ C+ +         +++SL+ ++ + G +  A  +F+ ++ K++ +WN ++ G
Sbjct: 359 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 418

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
           Y  +       + F  +   G++ +  ++  V+  C            HG ++  G
Sbjct: 419 YGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACS-----------HGGLVDKG 463



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 170/320 (53%), Gaps = 3/320 (0%)

Query: 45  IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
           I L+  L     L S  LG +VHG+ +K     DIF+ N+L+ MY+K G       +F++
Sbjct: 143 ITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQ 202

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +RN+VSW  +++  +QNG      ++  DM+ +G  PN   + +V+  C  M + + G
Sbjct: 203 MKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMG 262

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
             IH ++++  +  + F+  ++++ Y+K G ++ A  +F     DDV  +N +I GY+  
Sbjct: 263 KQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQS 321

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
            + FE+L +   M   GI  D  +F+ AL  C+ ++ F  G++IH +++R  +     + 
Sbjct: 322 PWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLS 381

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N+L+D+Y K   +  A K+F ++  KDV SWNT+  G+  +        LF      G  
Sbjct: 382 NSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLD 441

Query: 345 PNHVTFSILLRQC--GKLLD 362
            +HV++  +L  C  G L+D
Sbjct: 442 YDHVSYIAVLAACSHGGLVD 461



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 6/282 (2%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           + I L   L     + S  +G Q+H   ++ G   D+F+ N LI MYSKCG       +F
Sbjct: 242 NSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF 301

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
            E +E++ VS+  ++    Q+      L ++  M++ G   +  +    +  C ++   +
Sbjct: 302 -ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFK 360

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IHC  ++  +  +PF+  S+L+ Y K G +  A ++F  I+  DV  WN MI GY 
Sbjct: 361 HGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYG 420

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
             G    A  +   M  +G+  D  ++I  L  CS     D G++    ++   +E    
Sbjct: 421 MHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQM 480

Query: 283 IVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGG 321
               ++D+  ++  +    ++   M   A+ DV  W  L G 
Sbjct: 481 HYACMVDLLGRAGQLSKCAEIIRDMPFPANSDV--WGALLGA 520


>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
 gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
          Length = 721

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 309/622 (49%), Gaps = 15/622 (2%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H  A+K+    + ++  ++L  Y   G +A A  VF  +   +V  W+ +I   +  G
Sbjct: 23  AVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLG 82

Query: 226 YGFEALNVVSSMLFEG--ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
              +AL++ + ML  G     + +T    + GC+   D   G Q+H   ++  V+   S+
Sbjct: 83  VLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESV 142

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS---LFHKFIL 340
              L+DMY K   +  +++ F     + V+SW ++      + + G   +   LF K ++
Sbjct: 143 AGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLV 202

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               P + TFS +L+       L  G Q+    +  G   +  + ++L+ M+ RCG ++ 
Sbjct: 203 LKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDE 262

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
              +   + +   +    LL+ Y  N C+ + ++ F ++    + ++      +++ C  
Sbjct: 263 ITRLACRIRHDAFSR-TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++V +IH   +K  F     + ++++  Y   G + +S    N  E  D  SW A+
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++  V    + EA+  F  +V  G +   + + ++L +C+A  +      IH  V+KLG 
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV 441

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + +  V +A++  YAKCG ++ A   F+ S  +  +I +N LI +++ HG    A+++FD
Sbjct: 442 DDDTSVENALVTMYAKCGVVQVALKIFN-SMRNRGIISWNALITSFSQHGNEVAAIQLFD 500

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M+   + P   TFV ++S+CS  GLV +GC  FK M ++Y ++P  + Y C+VD+ +R 
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARA 560

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G   DA   I+ MP QP   V+ +LL+ CR+HGN +LG  A++K+L + P++ + +++LS
Sbjct: 561 GRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620

Query: 761 K--------RKRQREGNLLDHE 774
                     ++ R   LLD +
Sbjct: 621 SIHASIDMWDEKARNRTLLDFQ 642



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 271/627 (43%), Gaps = 40/627 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG  VKLG     +L NNL+  Y   G+      VFDEM  RN+VSW+++++A+ + G 
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83

Query: 126 FDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
               L ++  M   G    PN F V +++  C     +  G  +H  A+K+ ++++  V 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG---GYAHCGYGFEALNVVSSMLFE 240
            ++++ YAK G V ++ R F       V  W +MI     +   GY   A+ +   ML  
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +     TF   L+   +      G+Q+HG +++   E   ++  AL+ MY +  GMD  
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++  R+   D  S  +L   ++ N    +   +F   ++     +    + LL+ C  L
Sbjct: 264 TRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L +  ++ C AL   F  +  + ++++ ++ +CG +  +  VF+ +  K+  +W  LL
Sbjct: 323 GQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALL 382

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  N    + L  F  +   G+E +      V+  C  + +     QIH  ++K G  
Sbjct: 383 TCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVD 442

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L+  Y   G +  + +  N      + SW A++++    G+   A+ +F  +
Sbjct: 443 DDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMM 502

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            E    PD+Y    +L+SC+ +G                      VA         C   
Sbjct: 503 QEEMVCPDDYTFVGLLSSCSRMG---------------------LVAEG-------CEYF 534

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K  +  ++          Y  ++  +A  G  S+AM+  D M     QP Q  + +++++
Sbjct: 535 KQMKTKYNLEPKMEH---YTCMVDLFARAGRFSDAMKFIDAMP---CQPDQLVWEALLAS 588

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           C   G +D G +  K +       PSP
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSP 615



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 188/406 (46%), Gaps = 4/406 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  V G QVH   VKLG   D  +   L+ MY+KCG  G   R F    +R+++SWT ++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 118 SAAIQNGE---FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           +  + +G+    D  + ++  M      P       ++KV         G  +H   +K+
Sbjct: 179 ACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKM 238

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +P +G ++L  Y + G +    R+   I  D      +++  YA  G   EA+ V 
Sbjct: 239 GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFS-RTSLLTAYARNGCNMEAVRVF 297

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML   + +D+    + LQ CS +    + ++IH   +++       ++NA++ +Y K 
Sbjct: 298 RDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKC 357

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  +  VF  + +KD ISW  L   + +N    +    F + +  G   +    + +L
Sbjct: 358 GDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVL 417

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R C     L  G Q+    +  G  D+ +V ++L+ M+ +CG V++A  +F+++  + I 
Sbjct: 418 RACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGII 477

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +WN L++ +  +  +   ++ F  + E  V  +  TF  ++ +C R
Sbjct: 478 SWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSR 523



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 152/302 (50%), Gaps = 9/302 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWTLIVSA 119
           G QVHG +VK+G   D  L   L+AMY +CG    G+     +A R   +  S T +++A
Sbjct: 228 GKQVHGCLVKMGTEVDPALGTALLAMYGRCG----GMDEITRLACRIRHDAFSRTSLLTA 283

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             +NG     ++++ DM   G MP ++ A+ S+++VC S+G       IHC+ALK     
Sbjct: 284 YARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRL 342

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  +++  Y K GD+A++E VF ++ + D   W A++  Y       EAL     M+
Sbjct: 343 DTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMV 402

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            +G+    +   + L+ CS  +    G QIH  +++  V+   S+ NAL+ MY K   + 
Sbjct: 403 RKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A K+F  M ++ +ISWN L   FS++ N      LF         P+  TF  LL  C 
Sbjct: 463 VALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522

Query: 359 KL 360
           ++
Sbjct: 523 RM 524



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 213/479 (44%), Gaps = 17/479 (3%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG  ++     S  + N L+  Y     +  A  VF+ M  ++V+SW+ L    S  
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRL 81

Query: 326 KNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
              G   SLF   +  G   RPN  T + L+  C +  D   G Q+   A+  G  ++E+
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF-NCCDADVLKT----FCN 438
           V  +L+ M+ +CG V  +   F     +++ +W  +++  C  N  D+    T    F  
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA--CLVNHGDSGYRDTAIVLFKK 199

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +    V     TF  +++     E      Q+HG ++K G      + ++L+  Y   G 
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 499 LDNSFEFSNGAERL--DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +D   E +  A R+  D  S  ++++A    G N EAV +F  ++      D+  + ++L
Sbjct: 260 MD---EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLL 316

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
             C+++G  +  K IH + +K  F  +  + +A++  Y KCGDI  + + F+ +  + D 
Sbjct: 317 QVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFN-TLENKDT 375

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +  L+  Y  + L  EA+  F +M    L+ S     SV+ ACS    +  G  +   
Sbjct: 376 ISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
           +  + G+         LV M ++ G ++ A  +   M  +     + +L++    HGN+
Sbjct: 436 V-VKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNR-GIISWNALITSFSQHGNE 492



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 55/97 (56%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  +VKLG  +D  ++N L+ MY+KCG     L++F+ M  R ++SW  ++++  Q
Sbjct: 429 GWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSMRNRGIISWNALITSFSQ 488

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +G     ++++  M+     P+++    ++  C  MG
Sbjct: 489 HGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMG 525



 Score = 45.8 bits (107), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 5/172 (2%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +   +++H   +KLG     Y+ + ++ +Y   G +  AR  FD+    N V+ ++ LI 
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRN-VVSWSVLIA 76

Query: 625 AYAHHGLVSEAMEIFDKMKLANL--QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           A +  G++ +A+ +F  M       +P+  T  ++++ C+       G  +  S   + G
Sbjct: 77  ASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASA-VKLG 135

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           +       G LVDM ++ G +  +     + P Q S   + S+++    HG+
Sbjct: 136 VDEDESVAGTLVDMYAKCGRVGSSWRAFVLTP-QRSVLSWTSMIACLVNHGD 186


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 291/602 (48%), Gaps = 11/602 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLG---DVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           +H   ++  +  + FV   ++   A      D+  A +VF  ++  +   WN MI GY+ 
Sbjct: 36  LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI---GRQIHGLIIRSEVECS 280
           C    +AL V   M   G++ D YT    +   +  A       G  IH L+ R      
Sbjct: 96  CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +++ L++ Y     ++ A KVFE M ++DV+SW ++    ++  +  +   +  +   
Sbjct: 156 VFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  PN VT   LL  CG+   +D G  +       G   + ++ ++LI M+ +CG +  
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSD 275

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   F  +  +   +WN L+ G+  N    + L+ F  +   GV  +G T   V+  C +
Sbjct: 276 ALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQ 335

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +    +H  I   G      + +SLI  Y   G +  +        + D+ SW  M
Sbjct: 336 LGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVM 395

Query: 521 MSALVHQGHNHE-AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +   V +GH    A  +F  +  A     E  L ++L++C+ +GA  + + IH ++ ++ 
Sbjct: 396 VCGYV-KGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN 454

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              ++ + SA++D YAKCG I  A   F +       + +N +I   A +G   EA+E+F
Sbjct: 455 VAKDLCLESALVDMYAKCGCIDTASEIF-RKMQHKQTLSWNAMIGGLASNGYGKEAVELF 513

Query: 640 DKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           D+M +L + +P   T  +V+ AC+H G+VD+G   F  M S  G+ P  + YGC+VD+L 
Sbjct: 514 DQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLG 572

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L++A H I+ MP +P+P ++ SLL+ CR+H   +LG+   + ++ + P +   HVL
Sbjct: 573 RAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVL 632

Query: 759 LS 760
           +S
Sbjct: 633 VS 634



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 254/579 (43%), Gaps = 8/579 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAERNLVSWTL 115
           SR    ++HG +V+   T+D F+   LIA+ +         +  +VFD MA+ N   W  
Sbjct: 29  SRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNC 88

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFAL 172
           ++            L ++ +M+  G  P+ + + +V+    +    ++   G +IH    
Sbjct: 89  MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +I    + FV   ++N+Y     V  A +VF  +   DV  W +MI   A CG+  + L 
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLK 208

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           ++S M  EGI  +K T I+ L  C      D GR ++  + +  +E  + I NALI MY 
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +  A + F+ M  +   SWNTL  GF +N    +   +F + +L G  P+ +T   
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVS 328

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L  C +L +L  G+ +       G   +  +T+SLI M+ +CG +  A  VF  ++ K+
Sbjct: 329 VLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKD 388

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W  ++ GY            F  +  + V  +      ++  C +        +IH 
Sbjct: 389 VVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHS 448

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            I +   +    + S+L+  Y   G +D + E     +     SW AM+  L   G+  E
Sbjct: 449 YIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKE 508

Query: 533 AVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           AV +F  ++E  + KPD   L  +L +CA +G           +  LG   +      ++
Sbjct: 509 AVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIV 568

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHH 629
           D   + G +  A     +     + +++ +L+ A   HH
Sbjct: 569 DLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHH 607



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 201/409 (49%), Gaps = 13/409 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK R  G  +H  + ++GFT+D+F+ + L+  Y          +VF+EM ER++VSWT +
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSM 193

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +SA  Q G +D  LKM  +M+  G +PN+  + S++  C    A + G  ++    K  I
Sbjct: 194 ISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI 253

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  +  ++++ Y K G ++ A   F ++ +     WN +I G+       EAL +   
Sbjct: 254 EADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEE 313

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML  G+T D  T ++ L  C+ + +   G  +H  I  + + C   + N+LI+MY K   
Sbjct: 314 MLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGD 373

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  A +VF+ M  KDV+SW  +  G+ +        +LF +  ++    + +    LL  
Sbjct: 374 MAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSA 433

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYMFCRCGAVEMAHSVFDNVSY 410
           C +L  LD G ++        +++E NV       S+L+ M+ +CG ++ A  +F  + +
Sbjct: 434 CSQLGALDKGREIH------SYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQH 487

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETC 458
           K   +WN ++ G   N    + ++ F  + E    + +G T   V+  C
Sbjct: 488 KQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGAC 536



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 2/281 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   LS    L     G  VH +I   G   D  L N+LI MY+KCG      RVF
Sbjct: 322 DGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVF 381

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ++++VSWT++V   ++  +F M   ++ +MK    + +E A+ S++  C  +GA +
Sbjct: 382 QTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALD 441

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH +  ++ + K+  +  ++++ YAK G +  A  +F  +       WNAMIGG A
Sbjct: 442 KGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLA 501

Query: 223 HCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             GYG EA+ +   ML  +    D  T    L  C+ V   D G +   L+    V    
Sbjct: 502 SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDT 561

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
                ++D+  ++  +D AF   ++M  + + + W +L   
Sbjct: 562 EHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAA 602


>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/556 (28%), Positives = 278/556 (50%), Gaps = 11/556 (1%)

Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
           V  WN+ I    + GY  +AL +   M   G+  +  TF +  + CS + +    + +H 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
            +++S  +  + +  +++DMY+K S + +A+ +F RM  +DV SWN++  GF++     +
Sbjct: 79  HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDR 138

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
             SLF +  + G R + VT   L      L DL +   +    +  G   + +V+++ I 
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIA 198

Query: 391 MFCRCGAVEMAHSVFDNVS--YKNITTWNELLSGYC-FNCCDADVLKTFCNIWESGVEVN 447
            + +CG   +A +VFD +    K   +WN +++GY  F  C   V   F  +   G   +
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAV-GFFKKMLXGGFRAD 257

Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFS 506
             T   ++ +C + E       IH   I+ G  S   + ++LI  Y   G + ++ + F 
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317

Query: 507 N--GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
           N  G  R+   SW AM++    +G   EA+T+F ++   GEKPD   + ++++ C   GA
Sbjct: 318 NMLGKTRV---SWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGA 374

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
            +  K I  +    G    + V +A+ID YAKCG +  AR  F  +     ++ + TLI 
Sbjct: 375 LELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELF-YTMPEKSLVSWTTLIA 433

Query: 625 AYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQ 684
             A +G   EA+ +F +M    L+P+  TF++V+ AC+H G ++KG   F  M   Y + 
Sbjct: 434 GCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKIN 493

Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEK 744
           P  D Y C+ D+L R G L++A   I+ MPF+P   ++  LLS C+IH N  +GE  +  
Sbjct: 494 PGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYH 553

Query: 745 LLLLLPKNDAAHVLLS 760
           L  L P+    +V ++
Sbjct: 554 LFELEPQTAVPYVQMA 569



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 238/547 (43%), Gaps = 42/547 (7%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
           +AK+ S   NLK   +   VH H+VK  F  D+F+Q +++ MY KC   G+   +F  M 
Sbjct: 60  VAKACSKLLNLKYSQI---VHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMP 116

Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
            R++ SW  ++    Q G  D  + ++ +M   G   +   V  +    +S+   +   S
Sbjct: 117 XRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLES 176

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--DDVGCWNAMIGGYAHC 224
           IH F +KI I+ +  V  + +  YAK G+   AE VF  I         WN+MI GYAH 
Sbjct: 177 IHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHF 236

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
               +A+     ML  G   D  T ++ L  C        G+ IH   I+   +  I ++
Sbjct: 237 EQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVI 296

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
           N LI MY K   +  A  +F+ M  K  +SW  +  G +E  +  +  +LF      G +
Sbjct: 297 NTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEK 356

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           P+ VT   L+  CG+   L+LG  +   A   G  D   V ++LI ++ +CG+++ A  +
Sbjct: 357 PDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNAREL 416

Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
           F  +  K++ +W  L++G   N    + L  F  + E G++ N  TF  V++ C  +   
Sbjct: 417 FYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHA--- 473

Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF-----------------GQLDNSFEF-S 506
                        GF   G+ C +L+                       G+L  +FEF  
Sbjct: 474 -------------GFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQ 520

Query: 507 NGAERLDMASWGAMMSAL-VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAY 565
           N   + D+  W  ++SA  +HQ         +H      +    Y+   + N  A+ G +
Sbjct: 521 NMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYV--QMANIYASAGKW 578

Query: 566 QRTKSIH 572
            R  +I 
Sbjct: 579 DRVAAIR 585



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 122/530 (23%), Positives = 221/530 (41%), Gaps = 15/530 (2%)

Query: 109 NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH 168
            +  W   ++ ++  G     L ++  MK NG  PN     SV K C  +   ++   +H
Sbjct: 18  TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77

Query: 169 CFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
              +K R + + FV  SV++ Y K   +  A  +F  +   DV  WN+MI G+A  G+  
Sbjct: 78  THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVD 137

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
             +++   M  EGI  D  T I        + D  +   IH   I+  ++  +S+ N  I
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197

Query: 289 DMYIKSSGMDYAFKVFERMAD--KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
             Y K      A  VF+ +    K  +SWN++  G++  +   +    F K +  G R +
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD 257

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             T   LL  C +   L  G  +    +  G   +  V ++LI M+ +CG +  A  +FD
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFD 317

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
           N+  K   +W  +++G        + +  F  +   G + +  T   ++  C ++   ++
Sbjct: 318 NMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALEL 377

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              I       G      +C++LI  Y   G +DN+ E         + SW  +++    
Sbjct: 378 GKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCAL 437

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G   EA+ +F  +VE G KP+      +L +C   G  ++       +      T+VY 
Sbjct: 438 NGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLM------TKVYK 491

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFN-------SNDVIVYNTLIMAYAHH 629
            +  +D Y+   D+ G +    ++F          DV +++ L+ A   H
Sbjct: 492 INPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIH 541



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 185/391 (47%), Gaps = 12/391 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D + +      + +LK   +   +H   +K+G   D+ + N  IA Y+KCG FG   
Sbjct: 151 IRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAE 210

Query: 100 RVFDEMAE--RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
            VFD + +  +  VSW  +++      +    +  +  M   GF  +   + S++  CV 
Sbjct: 211 TVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQ 270

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                 G  IH   +++  + +  V  ++++ Y+K GD+ +A  +F ++       W AM
Sbjct: 271 PEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAM 330

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I G A  G   EA+ + S+M   G   D  T I+ + GC      ++G+ I      + +
Sbjct: 331 IAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGL 390

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
           + ++ + NALID+Y K   MD A ++F  M +K ++SW TL  G + N    +   LF +
Sbjct: 391 KDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQ 450

Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLG-----LQLQCLALHCGFLDEENVTSSLIYMF 392
            +  G +PNH+TF  +L+ C     L+ G     L  +   ++ G LD  +  + L+   
Sbjct: 451 MVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPG-LDHYSCMADLL--- 506

Query: 393 CRCGAVEMAHSVFDNVSYK-NITTWNELLSG 422
            R G ++ A     N+ +K ++  W+ LLS 
Sbjct: 507 GRKGRLKEAFEFIQNMPFKPDVGIWSVLLSA 537


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/585 (28%), Positives = 271/585 (46%), Gaps = 70/585 (11%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           D   F   L  C  +      R +HG +I++     + I N LID+Y K   +DYA KVF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 305 ERMADKDVIS-------------------------------WNTLFGGFSENKNPGQTAS 333
           +RM++++V S                               WN++  GF+++    +   
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
            F +        N  +F   L  C +L DL LG Q+  L     +  +  + S LI  + 
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG V  A  VFD +  KN+ +WN L++ Y  N    + L+ F  + E G + +  T   
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 454 VVETCCRSENQQMVGQIHGAIIKTG---------------FSSCGYI----C-------- 486
           VV  C      +   QIH  ++K+                ++ CG +    C        
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 487 -----SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
                ++++  Y     +  +       ++ D+ SW A+++     G N EA+ +F  L 
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN------TEVYVASAVIDAYA 595
                P  Y  G +LN+ A +   +  +  H  V+K GF        +++V +++ID Y 
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
           KCG ++     F ++    D + +NT+I+ YA +G   EA+E+F KM  +  +P   T +
Sbjct: 443 KCGSVEEGLRVF-ENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMI 501

Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
             + ACSH GLV++G   F SM  ++G+ P  D Y C+VD+L R G LE+AK +IE MP 
Sbjct: 502 GTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPK 561

Query: 716 QPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           QP   V+ SLLS C++H N  LG++ +EK+  + P +   +VLL+
Sbjct: 562 QPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLA 606



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 215/485 (44%), Gaps = 69/485 (14%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D    AK L L   L+S      VHG +++  F  ++F+QN LI +Y KCGY  +  +VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 103 DEMAERNLVS-------------------------------WTLIVSAAIQNGEFDMGLK 131
           D M+ERN+ S                               W  +++   Q+  F+  L 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 132 MYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYA 191
            +V M  + F+ N+++ GS +  C  +   + G  IH    K +   + F+G  +++FY+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 192 KLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
           K G V  A RVF  +   +V  WN +I  Y   G   EAL     M   G   D+ T  +
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262

Query: 252 ALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMA-- 308
            +  C+ +A F  G QIH  +++S+     + + NAL+DMY K   ++ A  VF+RM   
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322

Query: 309 -----------------------------DKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
                                         KD++SWN L  G+++N    +   LF    
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL----DEEN--VTSSLIYMFC 393
                P H TF  LL     L DL+LG Q     +  GF     +E +  V +SLI M+ 
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG+VE    VF+N+  K+  +WN ++ GY  N    + L+ F  + ESG + +  T   
Sbjct: 443 KCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIG 502

Query: 454 VVETC 458
            +  C
Sbjct: 503 TLCAC 507



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/439 (30%), Positives = 209/439 (47%), Gaps = 50/439 (11%)

Query: 24  RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           R+HR         D F+  D  F    LS    LK   LG Q+HG I K  ++ D+F+ +
Sbjct: 146 RMHR---------DDFVLNDYSF-GSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGS 195

Query: 84  NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
            LI  YSKCG  G   RVFD M E+N+VSW  +++   QNG     L+ +  M   GF P
Sbjct: 196 GLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKP 255

Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-GCSVLNFYAKLG-------- 194
           +E  + SV+  C ++ A + G  IH   +K    +N  + G ++++ YAK G        
Sbjct: 256 DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315

Query: 195 -----------------------DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
                                   V AA  +F +I   D+  WNA+I GY   G   EAL
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375

Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR------SEVECSISIVN 285
            +   +  E +    YTF N L   + +AD ++GRQ H  +++      S  E  I + N
Sbjct: 376 GLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGN 435

Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
           +LIDMY+K   ++   +VFE M +KD +SWNT+  G+++N    +   LF K + SG +P
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKP 495

Query: 346 NHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
           +HVT    L  C     ++ G +    +    G L  ++  + ++ +  R G +E A  +
Sbjct: 496 DHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDL 555

Query: 405 FDNVSYK-NITTWNELLSG 422
            +++  + +   W+ LLS 
Sbjct: 556 IESMPKQPDAVVWSSLLSA 574



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/493 (24%), Positives = 216/493 (43%), Gaps = 41/493 (8%)

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E+N F   S+++   + G V  +  +F  +   D   WN+MI G+A      EAL+    
Sbjct: 87  ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  +   ++ Y+F + L  CS + D  +G QIHGLI +S+    + + + LID Y K   
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +  A +VF+ M +K+V+SWN L   + +N    +    F +    G +P+ VT + ++  
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSA 266

Query: 357 CGKLLDLDLGLQLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFD--------- 406
           C  L     G+Q+    +    F ++  + ++L+ M+ +CG V  A  VFD         
Sbjct: 267 CATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVS 326

Query: 407 ----------------------NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
                                  +  K+I +WN L++GY  N  + + L  F  +    V
Sbjct: 327 ETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386

Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG------YICSSLIKSYVNFGQ 498
                TF  ++       + ++  Q H  ++K GF          ++ +SLI  Y+  G 
Sbjct: 387 CPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGS 446

Query: 499 LDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
           ++     F N  E+ D  SW  M+      G+  EA+ +F  ++E+GEKPD   +   L 
Sbjct: 447 VEEGLRVFENMVEK-DHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLC 505

Query: 558 SCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
           +C+  G  +  +        + G        + ++D   + G ++ A+   +      D 
Sbjct: 506 ACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDA 565

Query: 617 IVYNTLIMAYAHH 629
           +V+++L+ A   H
Sbjct: 566 VVWSSLLSACKVH 578



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 142/335 (42%), Gaps = 54/335 (16%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWG 98
            + D + LA  +S    L +   G Q+H  +VK   F ND+ L N L+ MY+KCG     
Sbjct: 253 FKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEA 312

Query: 99  LRVFDEMAERN-------------------------------LVSWTLIVSAAIQNGEFD 127
             VFD M  RN                               +VSW  +++   QNGE +
Sbjct: 313 RCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENE 372

Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRI----EKNPF 181
             L ++  +K     P  +  G+++    ++   E G   H   +K   R     E + F
Sbjct: 373 EALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIF 432

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG S+++ Y K G V    RVF ++   D   WN MI GYA  GYG EAL +   ML  G
Sbjct: 433 VGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESG 492

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQI-------HGLI-IRSEVECSISIVNALIDMYIK 293
              D  T I  L  CS     + GR+        HGL+ ++    C       ++D+  +
Sbjct: 493 EKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTC-------MVDLLGR 545

Query: 294 SSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
           +  ++ A  + E M  + D + W++L      ++N
Sbjct: 546 AGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRN 580


>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
          Length = 674

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 257/500 (51%), Gaps = 5/500 (1%)

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G+Q+H  +I+      +S+ N ++ +Y+K    +   K+F+ M  K+V+SWNTL  G  E
Sbjct: 92  GKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151

Query: 325 NKNPGQTASL----FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD 380
                    L    F + +L    PN +T + LLR   +L D+ +  QL C  L  GF  
Sbjct: 152 GNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDS 211

Query: 381 EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
              V S+L+  + + G V+ A S FD VS +++  WN ++S Y  N         F  + 
Sbjct: 212 NCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMR 271

Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
             GV+ +  TF  ++ +C    +  +  Q+HG II+  F     + S+L+  Y     ++
Sbjct: 272 LEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIE 331

Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++ +  +G    ++ SW  M       G   E + +   ++     PDE  L +IL+SC 
Sbjct: 332 DARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELALASILSSCG 391

Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
            + A      +H +V++ GF   + +A+A++ AY+KCG I  A  +F  S    D+I + 
Sbjct: 392 NLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSF-SSVAEPDIISWT 450

Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
           +L+ AYA HGL  + +++F+K+  +N++P +  F+ V+SAC+H G V +G   F  M + 
Sbjct: 451 SLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLEGLHYFNLMINV 510

Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
           Y + P  + Y  ++D+L R G+L++A +++  MP +P      + L  C+++ N  L  W
Sbjct: 511 YQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVYRNVGLARW 570

Query: 741 ASEKLLLLLPKNDAAHVLLS 760
           ASEKL ++ P     + L+S
Sbjct: 571 ASEKLFVMEPNEPGKYSLMS 590



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 210/417 (50%), Gaps = 4/417 (0%)

Query: 46  FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
           F + +L +S  L     G Q+H H++KLG  N + LQN ++ +Y KC  F    ++FDEM
Sbjct: 75  FSSHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEM 134

Query: 106 AERNLVSWTLIVSAAIQ-NGEF---DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
             +N+VSW  ++   ++ N +F    +G   +  M      PN   +  +++  + +   
Sbjct: 135 PLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDV 194

Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
                +HCF LK   + N FVG ++++ YAK G V  A+  F  +SS D+  WN M+  Y
Sbjct: 195 GICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCY 254

Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
           A  G   +A  V   M  EG+  D +TF + +  C ++    +G+Q+HGLIIR   +  +
Sbjct: 255 ALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDV 314

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
            + +AL+DMY K+  ++ A K F+ M  K+++SW T+  G+ ++ +  +   L  + I  
Sbjct: 315 LVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRV 374

Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
            + P+ +  + +L  CG L      +Q+    +  GF    ++ ++L+  + +CG++  A
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSA 434

Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
              F +V+  +I +W  L+  Y F+      +  F  I  S V  +   F  V+  C
Sbjct: 435 FQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSAC 491



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 177/397 (44%), Gaps = 7/397 (1%)

Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
           L+   KL  L  G QL    +  G  +  ++ + +++++ +C        +FD +  KN+
Sbjct: 80  LKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139

Query: 414 TTWNELLSGYCFNCCDADVLKT----FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
            +WN L+ G     C   +++     F  +    +  N  T   ++       +  +  Q
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199

Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
           +H  I+K+GF S  ++ S+L+ SY  FG +D +    +     D+  W  M+S     G 
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259

Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
             +A  +F  +   G K D +   +++NSC  +G+    K +H  +I+L F+ +V VASA
Sbjct: 260 QGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319

Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
           ++D Y+K  +I+ AR AFD     N ++ + T+ + Y  HG   E M +  +M      P
Sbjct: 320 LVDMYSKNENIEDARKAFDGMJVKN-IVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYP 378

Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
            +    S++S+C +     +  +   +   + G +        LV   S+ G +  A   
Sbjct: 379 DELALASILSSCGNLSATSE-VVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437

Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLL 746
              +  +P    + SL+     HG  + G    EK+L
Sbjct: 438 FSSVA-EPDIISWTSLMGAYAFHGLSKQGVDVFEKIL 473



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 102/196 (52%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG QVHG I++L F  D+ + + L+ MYSK        + FD M  +N+VSWT +     
Sbjct: 297 LGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYG 356

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q+G+    +++  +M      P+E A+ S++  C ++ A+     +H + ++   E    
Sbjct: 357 QHGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLS 416

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y+K G + +A + F S++  D+  W +++G YA  G   + ++V   +L   
Sbjct: 417 IANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSN 476

Query: 242 ITMDKYTFINALQGCS 257
           +  DK  F+  L  C+
Sbjct: 477 VRPDKVAFLGVLSACA 492



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +   D + LA  LS   NL +     QVH ++V+ GF   + + N L++ YSKCG  G  
Sbjct: 375 YTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSA 434

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
            + F  +AE +++SWT ++ A   +G    G+ ++  + ++   P++ A   V+  C   
Sbjct: 435 FQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHG 494

Query: 159 GASEFGYSIHCFALKIRI 176
           G    G  +H F L I +
Sbjct: 495 GFVLEG--LHYFNLMINV 510


>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
 gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 267/497 (53%), Gaps = 6/497 (1%)

Query: 267 QIHGLIIRSEVECSISIVNAL-IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           QIH LII + +  + S  N L I  Y +  G+  A  +F+++  + V +WN +   +S  
Sbjct: 25  QIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRR 84

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
            +  +  +L+H+ +  G +P+  TF++ ++    L DL+ G ++   A+  G+  +  V 
Sbjct: 85  YHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAVDFGYGCDVFVG 144

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVE 445
           SS++ ++ +CG ++ A  VFD +  +++  W  +++G   N    + +  F  + + G+E
Sbjct: 145 SSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRKEGIE 204

Query: 446 VNGCTFFYVVETCCRSENQQMVGQIHG-AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
            +G     +V+ C      ++   +HG A+ +        + +SL+  Y   G L+ +  
Sbjct: 205 GDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASR 264

Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGA 564
                 R +  SWGA++S     G    A+ +   +     KPD  +L + L +C+ +G 
Sbjct: 265 VFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGH 324

Query: 565 YQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
            +  KSIH ++++ LGF  E+ + +A+ID YAKCG +  A   FD+  +S DVI++NT+I
Sbjct: 325 LKLGKSIHGYIVRRLGF--ELVLGTALIDMYAKCGSLSCAHAIFDR-VDSRDVILWNTMI 381

Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
            +Y  HG   E + +F KMK AN+ P  ATF S++SA SH G VD G   F +M ++  +
Sbjct: 382 ASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECKI 441

Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
            PS   Y C+VD+ SR G +E+A  +IE M  +P   ++ +LLSGC  + N   GE A++
Sbjct: 442 PPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFGEVAAK 501

Query: 744 KLLLLLPKNDAAHVLLS 760
           K+L L P +   + L+S
Sbjct: 502 KILDLNPDDLGIYALVS 518



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 200/432 (46%), Gaps = 15/432 (3%)

Query: 49  KSLSLSENLKSRVLG-------TQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++LS  + LK  +L        TQ+H  I+  G  F N  F    +IA Y++ G      
Sbjct: 2   RTLSWPKRLKHLLLACKDEAPVTQIHALIITTGLFFANSNF-NGLVIASYARIGGITSAR 60

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD++ +R + +W  ++ A  +       L +Y  M   G  P+       +K   S+ 
Sbjct: 61  HLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLK 120

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
             E G  I   A+      + FVG SVLN Y K G +  A+ VF  +   DV CW  MI 
Sbjct: 121 DLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMIT 180

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           G    G   EA+++   M  EGI  D    +  +Q C+ + +  +G  +HG  +R E+  
Sbjct: 181 GLVQNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLM 240

Query: 280 SISIVN-ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
              I+  +L+DMY K   ++ A +VFE+M  K+ +SW  L  GF++N        L  + 
Sbjct: 241 DDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEM 300

Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ-CLALHCGFLDEENVTSSLIYMFCRCGA 397
                +P+       L  C ++  L LG  +   +    GF  E  + ++LI M+ +CG+
Sbjct: 301 QSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVRRLGF--ELVLGTALIDMYAKCGS 358

Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
           +  AH++FD V  +++  WN +++ Y  +    +VL  F  + E+ +  +  TF  ++  
Sbjct: 359 LSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSA 418

Query: 458 CCRSENQQMVGQ 469
              S  Q  VGQ
Sbjct: 419 LSHS-GQVDVGQ 429



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 118/508 (23%), Positives = 223/508 (43%), Gaps = 43/508 (8%)

Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
           V+  YA++G + +A  +F  +    V  WNAMI  Y+   +  E LN+   M+ EG   D
Sbjct: 46  VIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPD 105

Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
             TF  A++  S + D + G +I    +     C + + ++++++Y+K   +D A  VF+
Sbjct: 106 SSTFTVAIKASSSLKDLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFD 165

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
           +M  +DV+ W T+  G  +N N  +   +F +    G   + V    L++ C  L +L L
Sbjct: 166 KMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKL 225

Query: 366 GLQLQCLALHCGFL-DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           GL +   A+    L D+  + +SL+ M+ + G +E+A  VF+ +  KN  +W  L+SG+ 
Sbjct: 226 GLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFA 285

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT-GFSSCG 483
            N      L     +     + +       +  C +  + ++   IHG I++  GF    
Sbjct: 286 QNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVRRLGFELV- 344

Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
            + ++LI  Y   G L  +    +  +  D+  W  M+++    G   E +++F  + EA
Sbjct: 345 -LGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEA 403

Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
              PD     ++L++ +  G           V +  FN  V           +C      
Sbjct: 404 NISPDHATFASLLSALSHSGQVD--------VGQYWFNAMV----------NECKIPPSE 445

Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
           +              Y  ++  ++  G V EA ++ + M   N +P  A +V+++S C  
Sbjct: 446 KH-------------YACMVDLFSRAGRVEEAYQLIESM---NTEPGLAIWVALLSGCH- 488

Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYG 691
               +   LLF  + ++  +  +PD  G
Sbjct: 489 ----NYRNLLFGEVAAKKILDLNPDDLG 512



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 10/278 (3%)

Query: 56  NLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
           NL    LG  VHGH V+     +D+ LQ +L+ MY+K G      RVF++M  +N VSW 
Sbjct: 219 NLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWG 278

Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
            ++S   QNG  +  L + V+M++  F P+   + S +  C  +G  + G SIH + ++ 
Sbjct: 279 ALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVR- 337

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
           R+     +G ++++ YAK G ++ A  +F  + S DV  WN MI  Y   G G E L++ 
Sbjct: 338 RLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLF 397

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA----LIDM 290
             M    I+ D  TF + L   S     D+G+     ++    EC I         ++D+
Sbjct: 398 LKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVN---ECKIPPSEKHYACMVDL 454

Query: 291 YIKSSGMDYAFKVFERM-ADKDVISWNTLFGGFSENKN 327
           + ++  ++ A+++ E M  +  +  W  L  G    +N
Sbjct: 455 FSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRN 492



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 5/183 (2%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIV-KLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           + D   L  +L     +    LG  +HG+IV +LGF  ++ L   LI MY+KCG      
Sbjct: 306 KPDTAVLVSALLACSQVGHLKLGKSIHGYIVRRLGF--ELVLGTALIDMYAKCGSLSCAH 363

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD +  R+++ W  ++++   +G+    L +++ MK     P+     S++      G
Sbjct: 364 AIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSG 423

Query: 160 ASEFG-YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD-VGCWNAM 217
             + G Y  +    + +I  +      +++ +++ G V  A ++  S++++  +  W A+
Sbjct: 424 QVDVGQYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVAL 483

Query: 218 IGG 220
           + G
Sbjct: 484 LSG 486


>gi|302756145|ref|XP_002961496.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
 gi|300170155|gb|EFJ36756.1| hypothetical protein SELMODRAFT_61782 [Selaginella moellendorffii]
          Length = 570

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/563 (25%), Positives = 285/563 (50%), Gaps = 7/563 (1%)

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           ++ I+++ ++G  ++  Y K G V  A  VF  I   +V  W  ++      G     L 
Sbjct: 9   RLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLE 68

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV---ECSISIVNALID 289
           +   ML EGI  D+  ++  L+ CS +   + GR++  L++           +++ +L++
Sbjct: 69  LFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDPAVLTSLLN 128

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASLFHKFILSGSRPNHV 348
           +Y     ++ A +VFE   +KD++ WN++   +++++  G QT   F K +L G   N V
Sbjct: 129 LYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLLEGVAANVV 188

Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV 408
           +F+ ++  C +    + G  +       G + +  + ++L+ M+ +CG +  A  +F  V
Sbjct: 189 SFTCVVGACSRPELSEQGTVVHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRV 248

Query: 409 SYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMV 467
             K ++ +WN +L+ +        VL+ F  +   G++ +G T   V+  CC ++  ++V
Sbjct: 249 DVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIV 308

Query: 468 GQIHGAIIKTG-FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
             I+  + + G  S   ++ ++L+ S+ + G+L ++        R + ASW  M++  V 
Sbjct: 309 EHIYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQ 368

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYV 586
            G + +A+ + + +   G KP+      I+++C+++      K++H  +       +  +
Sbjct: 369 HGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVL 428

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLAN 646
            +A++  YA C  ++ +R  F +S +  D + +N +I AYA  G   + +E F  M    
Sbjct: 429 GTAIVSMYANCDSLEDSRRVF-ESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQG 487

Query: 647 LQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           L+P   TF+ V+ ACSH G V++ C LF S+   + + P+   Y C++D+L R G+LE+A
Sbjct: 488 LKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLHPAIQHYVCVIDLLGRAGWLENA 547

Query: 707 KHVIEIMPFQPSPTVYRSLLSGC 729
             +I  MP+QP+   + +LL  C
Sbjct: 548 HELINRMPYQPNSLAWSTLLGAC 570



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 148/579 (25%), Positives = 264/579 (45%), Gaps = 33/579 (5%)

Query: 67  HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
           H  + +LG   D +L N L+ MY KCGY    + VF  + +RN+ SWT+++ A  +NG  
Sbjct: 4   HRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLS 63

Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH-------CFALKIRIEKN 179
           ++ L+++  M   G  P+  A   V+K C  +   E G  +        CF   +    +
Sbjct: 64  ELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSL----D 119

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEALNVVSSML 238
           P V  S+LN YA  G +  A RVF S    D+ CWN+M+  YA H   G + L     ML
Sbjct: 120 PAVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKML 179

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            EG+  +  +F   +  CS     + G  +H  I  S +     +  AL++MY K   + 
Sbjct: 180 LEGVAANVVSFTCVVGACSRPELSEQGTVVHEQITCSGLVADSFLAAALVNMYSKCGRLG 239

Query: 299 YAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
            A+++F+R+  K  ++SWN++    ++  +  +   +F    L G +P+ VT   +L  C
Sbjct: 240 SAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGAC 299

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
                L +   +       G L  +  + ++L+  FC CG +  A S+F  ++  N  +W
Sbjct: 300 CSTQALRIVEHIYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYRLNRWNAASW 359

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N +++GY  +  D   L     +   G++ N  TF  +V+ C           +H  I  
Sbjct: 360 NTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISA 419

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
           +       + ++++  Y N   L++S       +  D  SW A+++A   QGH ++ +  
Sbjct: 420 SKVGLDTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLES 479

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQ----------RTKSIHPFVIKLGFNTEVYV 586
           F  ++  G KPD      +L++C+  G+ +          R  ++HP +       + YV
Sbjct: 480 FRCMIHQGLKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLHPAI-------QHYV 532

Query: 587 ASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA 625
              VID   + G ++ A    ++     + + ++TL+ A
Sbjct: 533 --CVIDLLGRAGWLENAHELINRMPYQPNSLAWSTLLGA 569



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 224/460 (48%), Gaps = 10/460 (2%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R  H  + R  ++    + N L+ MY K   ++ A  VF+R+ D++V SW  L    +EN
Sbjct: 1   RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTEN 60

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLD---EE 382
                T  LF + +L G RP+ V +  +L+ C +L  L+ G +++ L +         + 
Sbjct: 61  GLSELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGREVENLLVSGSCFPSSLDP 120

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC-FNCCDADVLKTFCNIWE 441
            V +SL+ ++  CG++E A  VF++   K++  WN +L+ Y          L+ F  +  
Sbjct: 121 AVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQKMLL 180

Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
            GV  N  +F  VV  C R E  +    +H  I  +G  +  ++ ++L+  Y   G+L +
Sbjct: 181 EGVAANVVSFTCVVGACSRPELSEQGTVVHEQITCSGLVADSFLAAALVNMYSKCGRLGS 240

Query: 502 SFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           ++E F     ++ + SW ++++A   +    + + IF  L   G KP    L ++L +C 
Sbjct: 241 AWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACC 300

Query: 561 AIGAYQRTKSIHPFVIKLG-FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
           +  A +  + I+  V ++G  + ++++ +A++ ++  CG +  A   F +  N  +   +
Sbjct: 301 STQALRIVEHIYERVAQVGELSHDLFLGTALMTSFCDCGKLADAESLFYR-LNRWNAASW 359

Query: 620 NTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD- 678
           NT+I  Y  HG   +A+ +  +M L  ++P+  TF+ ++ ACS   ++     + + +  
Sbjct: 360 NTMIAGYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISA 419

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
           S+ G+         +V M +    LED++ V E +  + +
Sbjct: 420 SKVGLDTVLGT--AIVSMYANCDSLEDSRRVFESLDLRDT 457



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 174/371 (46%), Gaps = 15/371 (4%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM-AERNLVSWTLIVSAAI 121
           GT VH  I   G   D FL   L+ MYSKCG  G    +F  +  + +LVSW  I++A  
Sbjct: 206 GTVVHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWELFQRVDVKMSLVSWNSILAAHA 265

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI-RIEKNP 180
           Q  +    L+++  ++  G  P+   + SV+  C S  A      I+    ++  +  + 
Sbjct: 266 QRADLTKVLEIFGMLQLEGLKPSGVTLISVLGACCSTQALRIVEHIYERVAQVGELSHDL 325

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           F+G +++  +   G +A AE +FY ++  +   WN MI GY   G+  +AL+++  M  E
Sbjct: 326 FLGTALMTSFCDCGKLADAESLFYRLNRWNAASWNTMIAGYVQHGFDLQALHLLYEMDLE 385

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
           GI  +  TF+  +  CS +A     + +H  I  S+V     +  A++ MY     ++ +
Sbjct: 386 GIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGLDTVLGTAIVSMYANCDSLEDS 445

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            +VFE +  +D +SWN +   ++E  +  Q    F   I  G +P++ TF  +L  C   
Sbjct: 446 RRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMIHQGLKPDNDTFIFVLHACSHA 505

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC------RCGAVEMAHSVFDNVSYK-NI 413
             ++     Q   L      + N+  ++ +  C      R G +E AH + + + Y+ N 
Sbjct: 506 GSVE-----QACDLFNSITRDHNLHPAIQHYVCVIDLLGRAGWLENAHELINRMPYQPNS 560

Query: 414 TTWNELLSGYC 424
             W+ LL G C
Sbjct: 561 LAWSTLL-GAC 570


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/602 (27%), Positives = 290/602 (48%), Gaps = 11/602 (1%)

Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLG---DVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           +H   ++  +  + FV   ++   A      D+  A +VF  ++  +   WN MI GY+ 
Sbjct: 36  LHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSS 95

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI---GRQIHGLIIRSEVECS 280
           C    +AL V   M   G++ D YT    +   +  A       G  IH L+ R      
Sbjct: 96  CEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSD 155

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
           + +++ L++ Y     +  A KVFE M ++DV+SW ++    ++  +  +   +  +   
Sbjct: 156 VFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQA 215

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
            G  PN VT   LL  CG+   +D G  +       G   + ++ ++LI M+ +CG +  
Sbjct: 216 EGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSD 275

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           A   F  +  +   +WN L+ G+  N    + L+ F  +   GV  +G T   V+  C +
Sbjct: 276 ALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQ 335

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               +    +H  I   G      + +SLI  Y   G +  +        + D+ SW  M
Sbjct: 336 LGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVM 395

Query: 521 MSALVHQGHNHE-AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
           +   V +GH    A  +F  +  A     E  L ++L++C+ +GA  + + IH ++ ++ 
Sbjct: 396 VCGYV-KGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN 454

Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
              ++ + SA++D YAKCG I  A   F +       + +N +I   A +G   EA+E+F
Sbjct: 455 VAKDLCLESALVDMYAKCGCIDTASEIF-RKMQHKQTLSWNAMIGGLASNGYGKEAVELF 513

Query: 640 DKM-KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
           D+M +L + +P   T  +V+ AC+H G+VD+G   F  M S  G+ P  + YGC+VD+L 
Sbjct: 514 DQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLG 572

Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
           R G L++A H I+ MP +P+P ++ SLL+ CR+H   +LG+   + ++ + P +   HVL
Sbjct: 573 RAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVL 632

Query: 759 LS 760
           +S
Sbjct: 633 VS 634



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/579 (24%), Positives = 254/579 (43%), Gaps = 8/579 (1%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAERNLVSWTL 115
           SR    ++HG +V+   T+D F+   LIA+ +         +  +VFD MA+ N   W  
Sbjct: 29  SRAHLAELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNC 88

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF---GYSIHCFAL 172
           ++            L ++ +M+  G  P+ + + +V+    +    ++   G +IH    
Sbjct: 89  MIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVR 148

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALN 232
           +I    + FV   ++N+Y     V  A +VF  +   DV  W +MI   A CG+  + L 
Sbjct: 149 RIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLK 208

Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
           ++S M  EGI  +K T I+ L  C      D GR ++  + +  +E  + I NALI MY 
Sbjct: 209 MLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYT 268

Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
           K   +  A + F+ M  +   SWNTL  GF +N    +   +F + +L G  P+ +T   
Sbjct: 269 KCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVS 328

Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
           +L  C +L +L  G+ +       G   +  +T+SLI M+ +CG +  A  VF  ++ K+
Sbjct: 329 VLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKD 388

Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
           + +W  ++ GY            F  +  + V  +      ++  C +        +IH 
Sbjct: 389 VVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHS 448

Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
            I +   +    + S+L+  Y   G +D + E     +     SW AM+  L   G+  E
Sbjct: 449 YIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKE 508

Query: 533 AVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVI 591
           AV +F  ++E  + KPD   L  +L +CA +G           +  LG   +      ++
Sbjct: 509 AVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDTEHYGCIV 568

Query: 592 DAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHH 629
           D   + G +  A     +     + +++ +L+ A   HH
Sbjct: 569 DLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHH 607



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 201/409 (49%), Gaps = 13/409 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           LK R  G  +H  + ++GFT+D+F+ + L+  Y          +VF+EM ER++VSWT +
Sbjct: 134 LKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSM 193

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
           +SA  Q G +D  LKM  +M+  G +PN+  + S++  C    A + G  ++    K  I
Sbjct: 194 ISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGI 253

Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
           E +  +  ++++ Y K G ++ A   F ++ +     WN +I G+       EAL +   
Sbjct: 254 EADVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEE 313

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           ML  G+T D  T ++ L  C+ + +   G  +H  I  + + C   + N+LI+MY K   
Sbjct: 314 MLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGD 373

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           M  A +VF+ M  KDV+SW  +  G+ +        +LF +  ++    + +    LL  
Sbjct: 374 MAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSA 433

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVT------SSLIYMFCRCGAVEMAHSVFDNVSY 410
           C +L  LD G ++        +++E NV       S+L+ M+ +CG ++ A  +F  + +
Sbjct: 434 CSQLGALDKGREIH------SYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQH 487

Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETC 458
           K   +WN ++ G   N    + ++ F  + E    + +G T   V+  C
Sbjct: 488 KQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGAC 536



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 134/281 (47%), Gaps = 2/281 (0%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           D I L   LS    L     G  VH +I   G   D  L N+LI MY+KCG      RVF
Sbjct: 322 DGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVF 381

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
             M ++++VSWT++V   ++  +F M   ++ +MK    + +E A+ S++  C  +GA +
Sbjct: 382 QTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALD 441

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G  IH +  ++ + K+  +  ++++ YAK G +  A  +F  +       WNAMIGG A
Sbjct: 442 KGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLA 501

Query: 223 HCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
             GYG EA+ +   ML  +    D  T    L  C+ V   D G +   L+    V    
Sbjct: 502 SNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYFYLMSSLGVVPDT 561

Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGG 321
                ++D+  ++  +D AF   ++M  + + + W +L   
Sbjct: 562 EHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAA 602


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 252/503 (50%), Gaps = 9/503 (1%)

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D    R +HGL + +       + +AL  +Y K S  D A KVF+ +   D I WNTL  
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLA 188

Query: 321 GFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           G      PG  A   F + + +G  RP+  T +  LR   +   + +G  +    + CG 
Sbjct: 189 GL-----PGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGL 243

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
            + E+V + L+ ++ +CG ++ A  +FD +   ++  +N L+SGY  N      ++ F  
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKE 303

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +  SG   N  T   V+       ++ +   +H  ++K    +   + ++L   Y     
Sbjct: 304 LTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLND 363

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           ++++    +      M SW AM+S     G    AV +F  + E   +P+   + + L++
Sbjct: 364 MESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSA 423

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA +GA    K +H  + K      VYV +A+ID YAKCG I  AR  FD+  N N V+ 
Sbjct: 424 CAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKN-VVS 482

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +N +I  Y  HG  +EA++++  M  A + P+ +TF+SV+ ACSH GLVD+G  +F+ M 
Sbjct: 483 WNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMT 542

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP-SPTVYRSLLSGCRIHGNKEL 737
           ++Y + P  +   C+VD+L R G L +A  +I   P     P V+ +LL  C +H N +L
Sbjct: 543 NEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDL 602

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
            + AS+KL  L  +N   +VLLS
Sbjct: 603 AKLASQKLFELDSENAGYYVLLS 625



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 160/325 (49%), Gaps = 2/325 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA SL  +       +G  VHG+ VK G      +   L+++YSKCG      
Sbjct: 208 VRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQ 267

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD M   +LV++  ++S    NG  +  ++++ ++  +G+ PN   + +V+ V    G
Sbjct: 268 FLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFG 327

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  +H F +K R++ +  V  ++   Y +L D+ +A  +F ++    +  WNAMI 
Sbjct: 328 HELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMIS 387

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G    A+ +   M    +  +  T  + L  C+ +    +G+ +H +I + ++E 
Sbjct: 388 GYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLEL 447

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ ++ ALIDMY K   +  A  +F+RM +K+V+SWN +  G+  +    +   L+   +
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDML 507

Query: 340 LSGSRPNHVTFSILLRQC--GKLLD 362
            +   P   TF  ++  C  G L+D
Sbjct: 508 DARILPTSSTFLSVIYACSHGGLVD 532



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/473 (23%), Positives = 216/473 (45%), Gaps = 21/473 (4%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG  V  G+  D F+ + L  +Y K        +VFD +   + + W  ++ A +   E
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLL-AGLPGSE 194

Query: 126 FDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
               L+ +V M   G + P+   + S ++          G  +H + +K  + ++  V  
Sbjct: 195 ---ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            +++ Y+K GD+ +A+ +F  + + D+  +NA+I GY+  G    ++ +   +   G   
Sbjct: 252 GLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRP 311

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  T +  +   S      + R +H  ++++ ++    +  AL  +Y + + M+ A  +F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M +K + SWN +  G+++N       +LF        +PN +T S  L  C  L  L 
Sbjct: 372 DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALS 431

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG  +  +           V ++LI M+ +CG++  A S+FD +  KN+ +WN ++SGY 
Sbjct: 432 LGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQIHGAI-IKTGF 479
            +   A+ LK + ++ ++ +     TF  V+  C       E Q++   +     I  G 
Sbjct: 492 LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGI 551

Query: 480 SSCGYICSSLIKSYVNFGQLDNSF----EFSNGAERLDMASWGAMMSA-LVHQ 527
             C  +   L ++    G+L+ +     EF   A  +    WGA++ A +VH+
Sbjct: 552 EHCTCMVDLLGRA----GKLNEALELISEFPQSA--IGPGVWGALLGACMVHK 598



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 3/270 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +L   +H  +VK     D  +   L  +Y +         +FD M E+ + SW  ++S  
Sbjct: 330 LLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGY 389

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG  +M + ++  M+     PN   + S +  C  +GA   G  +H    K ++E N 
Sbjct: 390 AQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNV 449

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  ++++ YAK G +A A  +F  + + +V  WNAMI GY   G G EAL +   ML  
Sbjct: 450 YVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDA 509

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDY 299
            I     TF++ +  CS     D G+++  ++     +   I     ++D+  ++  ++ 
Sbjct: 510 RILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNE 569

Query: 300 AFKVFERMADKDVIS--WNTLFGGFSENKN 327
           A ++        +    W  L G    +KN
Sbjct: 570 ALELISEFPQSAIGPGVWGALLGACMVHKN 599



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 3/191 (1%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q   +  ++ +PI ++ +LS   +L +  LG  VH  I K     ++++   LI MY+KC
Sbjct: 403 QLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKC 462

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +FD M  +N+VSW  ++S    +G+    LK+Y DM     +P      SV+
Sbjct: 463 GSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVI 522

Query: 153 KVCVSMGASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSD 209
             C   G  + G  +      + RI         +++   + G +  A  +   +  S+ 
Sbjct: 523 YACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAI 582

Query: 210 DVGCWNAMIGG 220
             G W A++G 
Sbjct: 583 GPGVWGALLGA 593


>gi|225460139|ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/588 (27%), Positives = 282/588 (47%), Gaps = 6/588 (1%)

Query: 133 YVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAK 192
           Y D +     P  F+  S+++ CV   +   G  IH       +E N F+   +++ Y  
Sbjct: 141 YCDQQGIPVNPTTFS--SLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTS 198

Query: 193 LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG--YGFEALNVVSSMLFEGITMDKYTFI 250
            G +  A  VF  +SS  V  WNA++ G    G  +  EAL+  S M   G+ ++ Y+F 
Sbjct: 199 CGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFS 258

Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
             ++  +    F  G + H L+I++ +  S  +  +LIDMY K   +  A  +FE + ++
Sbjct: 259 CMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVER 318

Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
           DV+ W  +  GF  N+   +           G  PN V  + +L   G++    LG ++ 
Sbjct: 319 DVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVH 378

Query: 371 CLALHC-GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
              +    +  +  + S+LI M+C+CG +     VF   + +N  +W  L+SGY  N   
Sbjct: 379 AYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRL 438

Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
              L++   + + G   +  T   V+  C      +   +IH   +K GF     I +SL
Sbjct: 439 DQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSL 498

Query: 490 IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDE 549
           +  Y   G LD SF+  +G +  ++ SW AM+ + V  G  HEAV +F S+  +  +PD 
Sbjct: 499 MVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDS 558

Query: 550 YILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ 609
             +  IL+ C  +   +  K IH  ++K  F +  +V++ +I  Y K G I  A++AF +
Sbjct: 559 VAMARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAF-K 617

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
           +  +   + +  +I AY ++ L  +A+ +F +M+     P+  TF +V+S C    L D 
Sbjct: 618 AIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAELADD 677

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
            CL+F  M  +Y ++ S + Y  ++++L+R G  EDA+  I++    P
Sbjct: 678 ACLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQRFIQMRSASP 725



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 239/530 (45%), Gaps = 5/530 (0%)

Query: 34  FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
           +C    +  +P   +  L      KS   G Q+H HI   G  N+ FL+  L+ MY+ CG
Sbjct: 141 YCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCG 200

Query: 94  YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE--FDMGLKMYVDMKTNGFMPNEFAVGSV 151
                  VFD ++ +++ +W  ++   + +G   +   L  Y +M+  G   N ++   +
Sbjct: 201 SLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCM 260

Query: 152 MKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
           +K      A   G   H   +K  +  +  +  S+++ Y K G +  A  +F  I   DV
Sbjct: 261 IKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDV 320

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
             W AMI G+ H     EAL  +  M  EGI  +       L     V  + +GR++H  
Sbjct: 321 VVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAY 380

Query: 272 IIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
           +++++     + I +ALIDMY K   M    +VF    +++ +SW  L  G+  N    Q
Sbjct: 381 VVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQ 440

Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
                      G RP+ VT + +L  C +L  L  G ++   A+  GFL   ++ +SL+ 
Sbjct: 441 ALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMV 500

Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
           M+ +CG ++ +  +FD +  +N+ +W  ++  Y  N C  + +  F ++  S    +   
Sbjct: 501 MYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVA 560

Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGA 509
              ++  C      ++  +IHG I+K  F S  ++ + +IK Y  FG +  +   F    
Sbjct: 561 MARILSICGELRVLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIP 620

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
            +  MA W A++ A  +     +A+ +FH +   G  P+ Y    +L+ C
Sbjct: 621 AKGSMA-WTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSIC 669



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 194/401 (48%), Gaps = 1/401 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G + H  ++K G  +   L+ +LI MY KCG       +F+E+ ER++V W  +++    
Sbjct: 273 GLKAHALLIKNGLVDSSILRTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGH 332

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR-IEKNPF 181
           N      L+    M+  G  PN   + +++ V   +GA + G  +H + +K +   K  F
Sbjct: 333 NRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVF 392

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           +  ++++ Y K GD+A+  +VFY+ +  +   W A++ GY   G   +AL  ++ M  EG
Sbjct: 393 IQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEG 452

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
              D  T    L  C+ +     G++IH   +++    ++SI  +L+ MY K   +DY+F
Sbjct: 453 FRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIATSLMVMYSKCGNLDYSF 512

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           K+F+ M  ++VISW  +   + EN    +   +F    LS  RP+ V  + +L  CG+L 
Sbjct: 513 KLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAMARILSICGELR 572

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
            L LG ++    L   F     V++ +I M+ + GA+  A   F  +  K    W  ++ 
Sbjct: 573 VLKLGKEIHGQILKKDFESIPFVSAEIIKMYGKFGAISKAKLAFKAIPAKGSMAWTAIIE 632

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSE 462
            Y +N    D +  F  +   G   N  TF  V+  C R+E
Sbjct: 633 AYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICERAE 673



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 118/505 (23%), Positives = 234/505 (46%), Gaps = 15/505 (2%)

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
           I  +A  G   EAL ++     +GI ++  TF + L+ C        G+QIH  I  + +
Sbjct: 123 IQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRINGL 182

Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG--FSENKNPGQTASLF 335
           E +  +   L+ MY     ++ A  VF+ ++ K V +WN L  G   S  ++  +  S +
Sbjct: 183 ENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTY 242

Query: 336 HKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
            +    G   N  +FS +++          GL+   L +  G +D   + +SLI M+ +C
Sbjct: 243 SEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSLIDMYFKC 302

Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
           G +++A  +F+ +  +++  W  +++G+  N    + L+    +   G+  N      ++
Sbjct: 303 GKIKLARLMFEEIVERDVVVWGAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTIL 362

Query: 456 ETCCRSENQQMVGQIHGAIIKT-GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
                    ++  ++H  ++KT  +S   +I S+LI  Y   G + +  +    +   + 
Sbjct: 363 PVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNA 422

Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF 574
            SW A+MS  V  G   +A+     + + G +PD   + T+L  CA + A ++ K IH +
Sbjct: 423 VSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSY 482

Query: 575 VIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSE 634
            +K GF   V +A++++  Y+KCG++  +   FD   ++ +VI +  +I +Y  +G + E
Sbjct: 483 AVKNGFLPNVSIATSLMVMYSKCGNLDYSFKLFD-GMDARNVISWTAMIDSYVENGCLHE 541

Query: 635 AMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD-----KGCLLFKSMDSQYGMQPSPDC 689
           A+ +F  M+L+  +P       ++S C    ++       G +L K  +S       P  
Sbjct: 542 AVGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFES------IPFV 595

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMP 714
              ++ M  + G +  AK   + +P
Sbjct: 596 SAEIIKMYGKFGAISKAKLAFKAIP 620



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 162/344 (47%), Gaps = 4/344 (1%)

Query: 62  LGTQVHGHIVKL-GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           LG +VH ++VK   ++  +F+Q+ LI MY KCG    G +VF    ERN VSWT ++S  
Sbjct: 373 LGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGY 432

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
           + NG  D  L+    M+  GF P+   V +V+ VC  + A   G  IH +A+K     N 
Sbjct: 433 VSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNV 492

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
            +  S++  Y+K G++  + ++F  + + +V  W AMI  Y   G   EA+ V  SM   
Sbjct: 493 SIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLS 552

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA-LIDMYIKSSGMDY 299
               D       L  C  +    +G++IHG I++ + E SI  V+A +I MY K   +  
Sbjct: 553 KHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDFE-SIPFVSAEIIKMYGKFGAISK 611

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A   F+ +  K  ++W  +   +  N       +LFH+    G  PNH TF  +L  C +
Sbjct: 612 AKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVLSICER 671

Query: 360 L-LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
             L  D  L    ++            SS+I +  R G  E A 
Sbjct: 672 AELADDACLIFNLMSRRYRIKASNEHYSSIIELLNRVGRTEDAQ 715


>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
 gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
          Length = 657

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 153/503 (30%), Positives = 252/503 (50%), Gaps = 9/503 (1%)

Query: 261 DFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFG 320
           D    R +HGL + +       + +AL  +Y K S +D A KVF+ +   D I WNTL  
Sbjct: 129 DAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLA 188

Query: 321 GFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
           G      PG  A   F + +  G  RP+  T +  LR   +   + +G  +    + CG 
Sbjct: 189 GL-----PGSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGL 243

Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
            + E+V + L+ ++ +CG ++ A S+FD +   ++  +N L+SGY  N      ++ F  
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKE 303

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +  S    N  T   V+       ++ +   +H  ++K    +   + ++L   Y     
Sbjct: 304 LAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLND 363

Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           ++++    +      M SW AM+S     G    AV +F  + E   +P+   + + L++
Sbjct: 364 MESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSA 423

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA +GA      +H  + K      VYV +A+ID YAKCG I  AR  FD+  N N V+ 
Sbjct: 424 CAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKN-VVS 482

Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
           +N +I  Y  HG  +EA++++  M  A + P+ +TF+SV+ ACSH GLVD+G  +F+ M 
Sbjct: 483 WNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMT 542

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP-SPTVYRSLLSGCRIHGNKEL 737
           ++Y + P  +   C+VD+L R G L +A  +I   P     P V+ +LLS C +H N +L
Sbjct: 543 NEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDL 602

Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
            + AS+KL  L  +N   +VLLS
Sbjct: 603 AKLASQKLFELDSENAGYYVLLS 625



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 158/325 (48%), Gaps = 2/325 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           +R D   LA SL  +       +G  VHG+ VK G      +   L+++YSKCG      
Sbjct: 208 VRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCAR 267

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD M + +LV++  ++S    NG  +  ++++ ++  + + PN   + +V+ V    G
Sbjct: 268 SLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFG 327

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
                  +H F +K R++ +  V  ++   Y +L D+ +A  +F ++    +  WNAMI 
Sbjct: 328 HELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMIS 387

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GYA  G    A+ +   M    +  +  T  + L  C+ +    +G  +H +I +  +E 
Sbjct: 388 GYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLEL 447

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ ++ ALIDMY K   +  A  +F+RM +K+V+SWN +  G+  +    +   L+   +
Sbjct: 448 NVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSML 507

Query: 340 LSGSRPNHVTFSILLRQC--GKLLD 362
            +   P   TF  +L  C  G L+D
Sbjct: 508 DACILPTSSTFLSVLYACSHGGLVD 532



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/472 (22%), Positives = 210/472 (44%), Gaps = 13/472 (2%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           +HG  V  G+  D F+ + L  +Y K        +VFD +   + + W  +++    +  
Sbjct: 136 LHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPGS-- 193

Query: 126 FDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
             + L+ +V M   G + P+   + S ++          G  +H + +K  + ++  V  
Sbjct: 194 --VALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVT 251

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
            +++ Y+K GD+  A  +F  +   D+  +NA+I GY+  G    ++ +   +       
Sbjct: 252 GLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWRP 311

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           +  T +  +   S      + R +H  ++++ ++    +  AL  +Y + + M+ A  +F
Sbjct: 312 NSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIF 371

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M +K + SWN +  G+++N        LF        +PN  T S  L  C +L  L 
Sbjct: 372 DAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALS 431

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG  +  +           V ++LI M+ +CG++  A S+FD +  KN+ +WN ++SGY 
Sbjct: 432 LGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG 491

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQIHGAI-IKTGF 479
            +   A+ LK + ++ ++ +     TF  V+  C       E Q++   +     I  G 
Sbjct: 492 LHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGI 551

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA-LVHQGHN 530
             C  +   L ++      LD   EF   A  +    WGA++SA +VH+  +
Sbjct: 552 EHCTCMVDLLGRAGKLNEALDLISEFPQSA--IGPGVWGALLSACMVHKNSD 601



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 180/401 (44%), Gaps = 15/401 (3%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H  ++      + FV  ++   Y KL  V  A +VF ++ S D   WN ++ G     
Sbjct: 135 TLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLP--- 191

Query: 226 YGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
            G  AL     M+  G +  D  T  ++L+  +  +   +GR +HG  ++  +     +V
Sbjct: 192 -GSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVV 250

Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
             L+ +Y K   MD A  +F+RM D D++++N L  G+S N     +  LF +   S  R
Sbjct: 251 TGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDWR 310

Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHC----GFLDEEN-VTSSLIYMFCRCGAVE 399
           PN  T   ++           G +L    LH       LD +  V+++L  ++CR   +E
Sbjct: 311 PNSSTLVAVIPVYSP-----FGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDME 365

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
            A S+FD +  K + +WN ++SGY  N      ++ F  + E  V+ N  T    +  C 
Sbjct: 366 SARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACA 425

Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
           +     +   +H  I K       Y+ ++LI  Y   G +  +    +  +  ++ SW A
Sbjct: 426 QLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNA 485

Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
           M+S     G   EA+ ++ S+++A   P      ++L +C+
Sbjct: 486 MISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACS 526



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 3/270 (1%)

Query: 61  VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
           +L   +H  +VK     D  +   L  +Y +         +FD M E+ + SW  ++S  
Sbjct: 330 LLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGY 389

Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
            QNG  +M ++++  M+     PN   + S +  C  +GA   G  +H    K  +E N 
Sbjct: 390 AQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNV 449

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  ++++ YAK G +A A  +F  + + +V  WNAMI GY   G G EAL +  SML  
Sbjct: 450 YVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDA 509

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDY 299
            I     TF++ L  CS     D G+++  ++     +   I     ++D+  ++  ++ 
Sbjct: 510 CILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNE 569

Query: 300 AFKVFERMADKDVIS--WNTLFGGFSENKN 327
           A  +        +    W  L      +KN
Sbjct: 570 ALDLISEFPQSAIGPGVWGALLSACMVHKN 599



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 62/135 (45%)

Query: 33  QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
           Q   +  ++ +P  ++ +LS    L +  LGT VH  I K     ++++   LI MY+KC
Sbjct: 403 QLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKC 462

Query: 93  GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
           G       +FD M  +N+VSW  ++S    +G     LK+Y  M     +P      SV+
Sbjct: 463 GSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVL 522

Query: 153 KVCVSMGASEFGYSI 167
             C   G  + G  +
Sbjct: 523 YACSHGGLVDEGQKV 537


>gi|302783475|ref|XP_002973510.1| hypothetical protein SELMODRAFT_99647 [Selaginella moellendorffii]
 gi|300158548|gb|EFJ25170.1| hypothetical protein SELMODRAFT_99647 [Selaginella moellendorffii]
          Length = 675

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/623 (26%), Positives = 295/623 (47%), Gaps = 15/623 (2%)

Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD 209
           S++K C    +   G  IH     + +E N  +G S+L  Y + G +  A   F  +   
Sbjct: 16  SLIKHCAQSKSLAEGKCIHQQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFTRMDLT 75

Query: 210 DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVA-DFD---I 264
           +   WNA I  +A  G+  EA+ V   M   G +  +  T +  L    L+  DF    I
Sbjct: 76  EPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLAI 135

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
            R+IH  I+  + E    +  +L+ +Y +   +  A  +F+ +  KD +SW+ +   ++ 
Sbjct: 136 AREIHTTILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLGFKDRVSWSVMISAYAH 195

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
           N         F +    G +PN + F  +L   G   DL  G ++  L +  G  ++  +
Sbjct: 196 NGRKDLALGFFREMQFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNKVIL 255

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            ++LI M+ RCG+   +  VF   + K++  WN ++  Y  N      ++ F  + ++  
Sbjct: 256 ATALITMYGRCGSPAASIRVFRRTNPKDLILWNSMIGAYAHNGEFEKSMRIFHQLLKAAP 315

Query: 445 EVNGCTFFYVVETCCRS-ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSF 503
             N  TF  ++     S EN +    +   I   G  +   + ++L+ +Y   G    + 
Sbjct: 316 --NRVTFLTLLGGLGTSNENARHAKVVEREITSRGLGTDAVVATALVSAYGKCGHAGEAR 373

Query: 504 EFSNGAERLDMASWGAMMSALVHQGHNHE-AVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
              +G E  ++ SW +M+SA  H  H HE A+ ++H ++  G  P        L +C+ +
Sbjct: 374 RIFDGIEPRNVVSWNSMISAYAHS-HRHELALDLYHRMLHEGVNPTVVTFVAALGACSEL 432

Query: 563 GAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTL 622
                   I   V   GF  +  + +AV+D Y KCG+++ AR  FD      DV+V++ L
Sbjct: 433 ADVAEGGKIISCVTDSGFELDHVLGTAVVDMYGKCGNLRRAREIFD-GMKKKDVVVWSAL 491

Query: 623 IMAYAHHGL----VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
             AY+HHG     +  A+++F  M+   ++P    F+ V+SAC + GLVD+GC  F S+ 
Sbjct: 492 AAAYSHHGTDRSQLHTALKVFHWMQQEGVRPGSVAFLGVLSACRNAGLVDQGCAYFSSIT 551

Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
           S +G++ + +  GC+VD+L R G+L +A+ +   M        +  LL  CR   + E  
Sbjct: 552 SDHGLEVTSEQLGCVVDLLGRAGWLAEAEALAARMAGGGDSCAWMMLLGACRDGRDVERA 611

Query: 739 EWASEKLLLLLPKNDAAHVLLSK 761
           + A+E++L   PKN  A+V+LS+
Sbjct: 612 KRAAERVLERDPKNAMAYVMLSQ 634



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/534 (24%), Positives = 238/534 (44%), Gaps = 35/534 (6%)

Query: 48  AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
           A+S SL+E       G  +H  +  L    ++ + ++L+ MY +CG        F  M  
Sbjct: 22  AQSKSLAE-------GKCIHQQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFTRMDL 74

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVC----VSMGASE 162
               SW   ++A  Q G +   +K++  MK  G   PN   + +V+ V     +   +  
Sbjct: 75  TEPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVLKLLPLDFKSLA 134

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
               IH   L  + E +  V  S+++ Y + G +  AE +F S+   D   W+ MI  YA
Sbjct: 135 IAREIHTTILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLGFKDRVSWSVMISAYA 194

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
           H G    AL     M FEG+  ++  F+N L       D   G +IH L+I++ ++  + 
Sbjct: 195 HNGRKDLALGFFREMQFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNKVI 254

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           +  ALI MY +      + +VF R   KD+I WN++ G ++ N    ++  +FH+ + + 
Sbjct: 255 LATALITMYGRCGSPAASIRVFRRTNPKDLILWNSMIGAYAHNGEFEKSMRIFHQLLKAA 314

Query: 343 SRPNHVTFSILLRQCG---------KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
             PN VTF  LL   G         K+++ ++  +        G   +  V ++L+  + 
Sbjct: 315 --PNRVTFLTLLGGLGTSNENARHAKVVEREITSR--------GLGTDAVVATALVSAYG 364

Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
           +CG    A  +FD +  +N+ +WN ++S Y  +      L  +  +   GV     TF  
Sbjct: 365 KCGHAGEARRIFDGIEPRNVVSWNSMISAYAHSHRHELALDLYHRMLHEGVNPTVVTFVA 424

Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLD 513
            +  C    +    G+I   +  +GF     + ++++  Y   G L  + E  +G ++ D
Sbjct: 425 ALGACSELADVAEGGKIISCVTDSGFELDHVLGTAVVDMYGKCGNLRRAREIFDGMKKKD 484

Query: 514 MASWGAMMSALVHQGHN----HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
           +  W A+ +A  H G +    H A+ +FH + + G +P       +L++C   G
Sbjct: 485 VVVWSALAAAYSHHGTDRSQLHTALKVFHWMQQEGVRPGSVAFLGVLSACRNAG 538



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 13/493 (2%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA 308
           +++ ++ C+       G+ IH  +   ++E ++SI ++L+ MY++   +D A   F RM 
Sbjct: 14  YVSLIKHCAQSKSLAEGKCIHQQVRTLDLEGNLSIGSSLLKMYLQCGSLDGARVAFTRMD 73

Query: 309 DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGL 367
             +  SWN     F++  +  +   +F +    GS  PN +T   +L    KLL LD   
Sbjct: 74  LTEPESWNAAIAAFAQEGHYSEAMKVFERMKELGSVAPNSITIVTVLNVL-KLLPLDFKS 132

Query: 368 QLQCLALHCGFLDEEN-----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
                 +H   L ++      V +SL+ ++ R G +  A S+F ++ +K+  +W+ ++S 
Sbjct: 133 LAIAREIHTTILAKKKEMDACVATSLMSLYGRFGCLPEAESIFQSLGFKDRVSWSVMISA 192

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
           Y  N      L  F  +   G++ N   F  V+       +     +IH  +I+ G  + 
Sbjct: 193 YAHNGRKDLALGFFREMQFEGMKPNQIVFVNVLNALGSPGDLLDGERIHSLVIQAGMQNK 252

Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
             + ++LI  Y   G    S          D+  W +M+ A  H G   +++ IFH L++
Sbjct: 253 VILATALITMYGRCGSPAASIRVFRRTNPKDLILWNSMIGAYAHNGEFEKSMRIFHQLLK 312

Query: 543 AGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
           A   P+     T+L          R  K +   +   G  T+  VA+A++ AY KCG   
Sbjct: 313 AA--PNRVTFLTLLGGLGTSNENARHAKVVEREITSRGLGTDAVVATALVSAYGKCGHAG 370

Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
            AR  FD      +V+ +N++I AYAH      A++++ +M    + P+  TFV+ + AC
Sbjct: 371 EARRIFD-GIEPRNVVSWNSMISAYAHSHRHELALDLYHRMLHEGVNPTVVTFVAALGAC 429

Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
           S    V +G  +   + +  G +        +VDM  + G L  A+ + + M  +    V
Sbjct: 430 SELADVAEGGKIISCV-TDSGFELDHVLGTAVVDMYGKCGNLRRAREIFDGMK-KKDVVV 487

Query: 722 YRSLLSGCRIHGN 734
           + +L +    HG 
Sbjct: 488 WSALAAAYSHHGT 500


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 262/499 (52%), Gaps = 8/499 (1%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           +QIH  ++   ++ S  ++  LI        + +A +VF+ +    +  WN +  G+S N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 326 KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVT 385
            +      ++    L+   P+  TF  LL+ C  L  L +G  +       GF  +  V 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 386 SSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
           + LI ++ +C  +  A +VF+ +    + I +W  ++S Y  N    + L+ F  + +  
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 444 VEVNGCTFFYVVE--TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
           V+ +      V+   TC +   Q     IH +++K G      +  SL   Y   GQ+  
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGR--SIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275

Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
           +    +  +  ++  W AM+S     G+  EA+ +FH ++    +PD   + + +++CA 
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335

Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
           +G+ ++ +S++ +V +  +  +V+++SA+ID +AKCG ++GAR+ FD++ +  DV+V++ 
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD-RDVVVWSA 394

Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
           +I+ Y  HG   EA+ ++  M+   + P+  TF+ ++ AC+H G+V +G   F  M + +
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADH 453

Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
            + P    Y C++D+L R G+L+ A  VI+ MP QP  TV+ +LLS C+ H + ELGE+A
Sbjct: 454 KINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYA 513

Query: 742 SEKLLLLLPKNDAAHVLLS 760
           +++L  + P N   +V LS
Sbjct: 514 AQQLFSIDPSNTGHYVQLS 532



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 3/364 (0%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--EMAERNLVSWTLIVSA 119
           +G  VH  + +LGF  D+F+QN LIA+Y+KC   G    VF+   + ER +VSWT IVSA
Sbjct: 137 MGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSA 196

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
             QNGE    L+++  M+     P+  A+ SV+     +   + G SIH   +K+ +E  
Sbjct: 197 YAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256

Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
           P +  S+   YAK G VA A+ +F  + S ++  WNAMI GYA  GY  EA+++   M+ 
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316

Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
           + +  D  +  +A+  C+ V   +  R ++  + RS+    + I +ALIDM+ K   ++ 
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376

Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
           A  VF+R  D+DV+ W+ +  G+  +    +  SL+      G  PN VTF  LL  C  
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNE 418
              +  G              ++   + +I +  R G ++ A+ V   +  +  +T W  
Sbjct: 437 SGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496

Query: 419 LLSG 422
           LLS 
Sbjct: 497 LLSA 500



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 211/485 (43%), Gaps = 11/485 (2%)

Query: 52  SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLV 111
           SL ++   +    Q+H  ++ LG     FL   LI   S  G   +  +VFD++    + 
Sbjct: 26  SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85

Query: 112 SWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA 171
            W  I+    +N  F   L MY +M+     P+ F    ++K C  +   + G  +H   
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGFE 229
            ++  + + FV   ++  YAK   + +A  VF    +    +  W A++  YA  G   E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           AL + S M    +  D    ++ L   + + D   GR IH  +++  +E    ++ +L  
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +  A  +F++M   ++I WN +  G+++N    +   +FH+ I    RP+ ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
            +  +  C ++  L+    +        + D+  ++S+LI MF +CG+VE A  VFD   
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQ 465
            +++  W+ ++ GY  +    + +  +  +   GV  N  TF  ++  C  S    E   
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWW 445

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSAL 524
              ++  A  K       Y C  +I      G LD ++E       +  +  WGA++SA 
Sbjct: 446 FFNRM--ADHKINPQQQHYAC--VIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC 501

Query: 525 VHQGH 529
               H
Sbjct: 502 KKHRH 506



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 129/289 (44%), Gaps = 1/289 (0%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ D + L   L+    L+    G  +H  +VK+G   +  L  +L  MY+KCG      
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            +FD+M   NL+ W  ++S   +NG     + M+ +M      P+  ++ S +  C  +G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
           + E   S++ +  +     + F+  ++++ +AK G V  A  VF      DV  W+AMI 
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397

Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
           GY   G   EA+++  +M   G+  +  TF+  L  C+       G      +   ++  
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKN 327
                  +ID+  ++  +D A++V + M     V  W  L     ++++
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRH 506


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 285/578 (49%), Gaps = 1/578 (0%)

Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
           KN F   +++  Y K G+++ A  +F S+       W  +IGGYA      EA  +   M
Sbjct: 130 KNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEM 189

Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
              GI  D  +    L G +     +  RQ+H  +I+   + ++ + N+L+D Y K+  +
Sbjct: 190 GRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSL 249

Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
             AF++F  + ++D +++N L  G+S+     +  +LF K    G RP   TF+ +L   
Sbjct: 250 GLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAG 309

Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
            +L D++ G Q+    + C F+    V ++L+  + +   V  A  +F  +   +  ++N
Sbjct: 310 IQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYN 369

Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
            L++ Y +N    + L+ F  +  +G +     F  ++     S N  +  QIH   I T
Sbjct: 370 VLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVT 429

Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
              S   + +SL+  Y   G+   +    +         W AM+S+ V +G + + + +F
Sbjct: 430 DAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLF 489

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +  A    D     +I+ +CA++ +    K +H  +I  G+ + V+  SA++D YAKC
Sbjct: 490 VEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC 549

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
           G IK A   F Q     + + +N LI AYA +G     + +F++M  + LQP   + +S+
Sbjct: 550 GSIKDALQMF-QEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSI 608

Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
           + ACSH GLV++G   F SM   Y + P  + Y   +DML R G  ++A+ ++  MPF+P
Sbjct: 609 LCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEP 668

Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
              ++ S+L+ C IH N+EL + A+ +L  +    DAA
Sbjct: 669 DEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAA 706



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 230/486 (47%)

Query: 78  DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
           +IF  N +I  Y K G       +FD M +R  V+WT+++    QN +F     ++++M 
Sbjct: 131 NIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMG 190

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
            +G  P+  ++ +++       +      +H   +K+  +    V  S+L+ Y K   + 
Sbjct: 191 RHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLG 250

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
            A ++F  I   D   +NA++ GY+  G+  EA+N+   M   G    ++TF   L    
Sbjct: 251 LAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGI 310

Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
            + D + G+Q+HG +++     ++ + NAL+D Y K   +  A K+F  M + D IS+N 
Sbjct: 311 QLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNV 370

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           L   ++ N    ++  LF +   +G    +  F+ LL      L+LD+G Q+    +   
Sbjct: 371 LVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTD 430

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
            + E  V +SL+ M+ +CG    A+ +F +++ ++   W  ++S Y       D LK F 
Sbjct: 431 AISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFV 490

Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
            +  + +  +  T+  +V  C    +  +  Q+H  II +G+ S  +  S+L+  Y   G
Sbjct: 491 EMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCG 550

Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
            + ++ +        +  SW A++SA    G     + +F  +V +G +PD   L +IL 
Sbjct: 551 SIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610

Query: 558 SCAAIG 563
           +C+  G
Sbjct: 611 ACSHCG 616



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 224/495 (45%), Gaps = 33/495 (6%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH H++KLG+ + + + N+L+  Y K    G   ++F+++ ER+ V++  +++   + G
Sbjct: 219 QVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEG 278

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
                + ++  M+  G+ P EF   +++   + +   EFG  +H F +K     N FV  
Sbjct: 279 FNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVAN 338

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           ++L+FY+K   V  A ++FY +   D   +N ++  YA  G   E+L +   + F G   
Sbjct: 339 ALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDR 398

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
             + F   L   ++  + DIGRQIH   I ++    I + N+L+DMY K      A ++F
Sbjct: 399 RNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIF 458

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
             +A +  + W  +   + +         LF +   +    +  T++ ++R C  L  L 
Sbjct: 459 SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLT 518

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
           LG QL    +  G++      S+L+ M+ +CG+++ A  +F  +  +N  +WN L+S Y 
Sbjct: 519 LGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYA 578

Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
            N      L+ F  +  SG++ +  +   ++  C                     S CG 
Sbjct: 579 QNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCAC---------------------SHCGL 617

Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
           +   L   Y  F  +   ++     E      + + +  L   G   EA  +   + +  
Sbjct: 618 VEEGL--QY--FDSMTRIYKLVPKKEH-----YASTIDMLCRGGRFDEAEKL---MAQMP 665

Query: 545 EKPDEYILGTILNSC 559
            +PDE +  ++LNSC
Sbjct: 666 FEPDEIMWSSVLNSC 680



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 173/368 (47%), Gaps = 5/368 (1%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
            G QVHG +VK  F  ++F+ N L+  YSK        ++F EM E + +S+ ++V+   
Sbjct: 317 FGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYA 376

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
            NG     L+++ +++  GF    F   +++ +       + G  IH   +         
Sbjct: 377 WNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL 436

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
           VG S+++ YAK G+   A R+F  ++      W AMI  Y   G   + L +   M    
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
           I  D  T+ + ++ C+ +A   +G+Q+H  II S    ++   +AL+DMY K   +  A 
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556

Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
           ++F+ M  ++ +SWN L   +++N +   T  LF + + SG +P+ V+   +L  C    
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616

Query: 362 DLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
            ++ GLQ    +      + ++   +S I M CR G  + A  +   + ++     +E++
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEP----DEIM 672

Query: 421 SGYCFNCC 428
                N C
Sbjct: 673 WSSVLNSC 680



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 154/310 (49%), Gaps = 19/310 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           +G Q+H   +     ++I + N+L+ MY+KCG FG   R+F ++A ++ V WT ++S+ +
Sbjct: 418 IGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYV 477

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G  + GLK++V+M+      +     S+++ C S+ +   G  +H   +      N F
Sbjct: 478 QKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVF 537

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
            G ++++ YAK G +  A ++F  +   +   WNA+I  YA  G G   L +   M+  G
Sbjct: 538 SGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSG 597

Query: 242 ITMDKYTFINALQGCS---LVAD----FDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
           +  D  + ++ L  CS   LV +    FD   +I+ L+ + E   S       IDM  + 
Sbjct: 598 LQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYAST------IDMLCRG 651

Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFG--GFSENKNPGQTAS--LFHKFILSGSRPNHVT 349
              D A K+  +M  + D I W+++    G  +N+   + A+  LF+  +L  + P +VT
Sbjct: 652 GRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP-YVT 710

Query: 350 FSILLRQCGK 359
            S +    G+
Sbjct: 711 MSNIYAAAGE 720



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/495 (20%), Positives = 220/495 (44%), Gaps = 36/495 (7%)

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV------------------- 312
           II++    +    N L+  +++   ++ A K+F+ M  K++                   
Sbjct: 92  IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151

Query: 313 ------------ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
                       ++W  L GG+++N    +   LF +    G  P+HV+ + LL    + 
Sbjct: 152 RTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEF 211

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             ++   Q+    +  G+     V++SL+  +C+  ++ +A  +F+++  ++  T+N LL
Sbjct: 212 DSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALL 271

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           +GY     + + +  F  + E G      TF  ++    + ++ +   Q+HG ++K  F 
Sbjct: 272 TGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV 331

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
              ++ ++L+  Y    ++  + +       +D  S+  +++     G   E++ +F  L
Sbjct: 332 WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKEL 391

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
              G     +   T+L+  A        + IH   I     +E+ V ++++D YAKCG+ 
Sbjct: 392 QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEF 451

Query: 601 KGARMAF-DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
             A   F D +  S+  + +  +I +Y   GL  + +++F +M+ A +    AT+ S++ 
Sbjct: 452 GEANRIFSDLAIQSS--VPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVR 509

Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
           AC+    +  G  L   +    G   +      LVDM ++ G ++DA  + + MP + S 
Sbjct: 510 ACASLASLTLGKQLHSHIIGS-GYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSV 568

Query: 720 TVYRSLLSGCRIHGN 734
           + + +L+S    +G+
Sbjct: 569 S-WNALISAYAQNGD 582



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 65/109 (59%)

Query: 56  NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
           +L S  LG Q+H HI+  G+ +++F  + L+ MY+KCG     L++F EM  RN VSW  
Sbjct: 513 SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNA 572

Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           ++SA  QNG+ D  L+++ +M  +G  P+  ++ S++  C   G  E G
Sbjct: 573 LISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEG 621



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 102/223 (45%), Gaps = 32/223 (14%)

Query: 469 QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQG 528
            +  +IIKTGF+   Y  + L+KS++  G L+ + +  +     ++ S   M+   +  G
Sbjct: 87  HVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSG 146

Query: 529 HNHEAVTIFHSLVEA-------------------------------GEKPDEYILGTILN 557
           +  EA T+F S+ +                                G  PD   L T+L+
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206

Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
                 +    + +H  VIKLG+++ + V+++++D+Y K   +  A   F+      D +
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFN-DIPERDSV 265

Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
            +N L+  Y+  G   EA+ +F KM+    +P++ TF ++++A
Sbjct: 266 TFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308


>gi|296090396|emb|CBI40215.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 295/586 (50%), Gaps = 25/586 (4%)

Query: 171 ALKIRIEKNP----FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
            L + I++ P    F   + +    +LG V  A RVF  +   DV  WN+MI GY+  G 
Sbjct: 26  TLSLPIQETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGK 85

Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
             EA  +  +  F G  +  +T +  L G +     +  R++      S  E ++   NA
Sbjct: 86  VDEARLLFDA--FVGKNIRTWTIL--LTGYAKEGRIEEAREV----FESMTERNVVSWNA 137

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           +I  Y+++  +  A K+F+ M +K+V SWN++  G+       +   LF +       P 
Sbjct: 138 MISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM------PE 191

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
             + S ++   G +   D           C   +E + T+ +I  F +CG ++ A  +++
Sbjct: 192 RNSVSWMVMISGYVHISDYWEAWDVFVKMCRTRNEYSWTT-MIAAFAQCGRLDDAIQLYE 250

Query: 407 NVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
            V  + N  +W  +++G+  N    + L+    +  SG   +  +F   +  C    + +
Sbjct: 251 RVPEQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVE 310

Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL-DNSFEFSN-GAERLDMASWGAMMSA 523
           +   IH   IKTG     Y+ + LI  Y   G + D S  F      + D+ SW A++SA
Sbjct: 311 IGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISA 370

Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
            V  GH   A+ +F  ++  G KP++  + ++L++C  +GA +  +  H  + KLGF+T 
Sbjct: 371 YVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTF 430

Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
           ++V +++I  Y KCG   G      +    +D+I +N +++  A +GL  EA++IF++M+
Sbjct: 431 LFVGNSLITMYFKCGYEDG--FCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQME 488

Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
           +  + P Q +F+ V+ ACSH GLVD+G   F SM  +YG+ P    Y C+VD+L R GYL
Sbjct: 489 VEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYL 548

Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
            +A+ +IE MP +P   ++ +LL  CRIH N EL  + SEKL ++ 
Sbjct: 549 SEAEALIENMPVKPDSVIWEALLGACRIHRNNEL-LYHSEKLAVVF 593



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/555 (22%), Positives = 239/555 (43%), Gaps = 20/555 (3%)

Query: 79  IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
           +F  N  I    + G      RVF+EM +R++VSW  +++   QNG+ D    ++     
Sbjct: 39  LFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----- 93

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA 198
           + F+       +++   ++  A E          +   E+N     ++++ Y + GD+  
Sbjct: 94  DAFVGKNIRTWTIL---LTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 150

Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
           A ++F  +   +V  WN+++ GY HC    EA  +   M       +  +++  + G   
Sbjct: 151 ARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM----PERNSVSWMVMISGYVH 206

Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNT 317
           ++D+     +   + R+  E S +    +I  + +   +D A +++ER+ ++ +  SW  
Sbjct: 207 ISDYWEAWDVFVKMCRTRNEYSWT---TMIAAFAQCGRLDDAIQLYERVPEQTNSASWAA 263

Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
           +  GF +N+   +   L  +   SGS P+  +F+  L  C  + D+++G  +  LA+  G
Sbjct: 264 MIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTG 323

Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKT 435
                 V + LI M+ +CG VE    VF  +    +++ +W  ++S Y         L  
Sbjct: 324 CQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDL 383

Query: 436 FCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN 495
           F ++   G++ N  T   ++  C      ++  Q H  I K GF +  ++ +SLI  Y  
Sbjct: 384 FLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK 443

Query: 496 FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
            G  D    F    E  D+ +W A++      G   EA+ IF  +   G  PD+     +
Sbjct: 444 CGYEDGFCVFEEMPEH-DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGV 502

Query: 556 LNSCAAIGAYQRTKS-IHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
           L +C+  G      +  +    K G    VY  + ++D   + G +  A    +      
Sbjct: 503 LCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKP 562

Query: 615 DVIVYNTLIMAYAHH 629
           D +++  L+ A   H
Sbjct: 563 DSVIWEALLGACRIH 577



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 175/358 (48%), Gaps = 5/358 (1%)

Query: 71  VKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMG 129
           VK+  T + +    +IA +++CG     +++++ + E+ N  SW  +++  +QN E    
Sbjct: 218 VKMCRTRNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTNSASWAAMIAGFVQNEESREA 277

Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
           L++ +++  +G +P++ +  S +  C ++G  E G  IH  A+K   + N +V   +++ 
Sbjct: 278 LELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISM 337

Query: 190 YAKLGDVAAAERVFYSI--SSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
           YAK G+V     VF +I     DV  W A+I  Y   G+G  AL++   ML  GI  ++ 
Sbjct: 338 YAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQL 397

Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
           T  + L  C  +    +G Q H LI +   +  + + N+LI MY K  G +  F VFE M
Sbjct: 398 TVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFK-CGYEDGFCVFEEM 456

Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
            + D+I+WN +  G ++N    +   +F +  + G  P+ ++F  +L  C     +D G 
Sbjct: 457 PEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGW 516

Query: 368 -QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
                +    G +      + ++ +  R G +  A ++ +N+  K  +   E L G C
Sbjct: 517 AHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGAC 574



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 191/434 (44%), Gaps = 36/434 (8%)

Query: 59  SRVLGTQVHGHIVKLGFTNDIFLQNN------LIAMYSKCGYFGWGLRVFDEMAERNLVS 112
           S + G   +G + +     D F+  N      L+  Y+K G       VF+ M ERN+VS
Sbjct: 75  SMINGYSQNGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVS 134

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMK----------TNGF---------------MPNEFA 147
           W  ++S  +QNG+     K++ +M             G+               MP   +
Sbjct: 135 WNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNS 194

Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
           V  ++ +   +  S++  +   F    R  +N +   +++  +A+ G +  A +++  + 
Sbjct: 195 VSWMVMISGYVHISDYWEAWDVFVKMCRT-RNEYSWTTMIAAFAQCGRLDDAIQLYERVP 253

Query: 208 SD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
              +   W AMI G+       EAL ++  +   G      +F +AL  C+ + D +IGR
Sbjct: 254 EQTNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGR 313

Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE--RMADKDVISWNTLFGGFSE 324
            IH L I++  + +  ++N LI MY K   ++    VF   RM  +DV+SW  +   + +
Sbjct: 314 VIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRMPKRDVVSWTAIISAYVQ 373

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
             +      LF   +  G +PN +T + LL  CG L  + LG Q   L    GF     V
Sbjct: 374 AGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFV 433

Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
            +SLI M+ +CG  E    VF+ +   ++ TWN +L G   N    + +K F  +   G+
Sbjct: 434 GNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGI 492

Query: 445 EVNGCTFFYVVETC 458
             +  +F  V+  C
Sbjct: 493 LPDQMSFLGVLCAC 506



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 151/323 (46%), Gaps = 15/323 (4%)

Query: 47  LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD--E 104
              +LS   N+    +G  +H   +K G   + ++ N LI+MY+KCG    G  VF    
Sbjct: 296 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 355

Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
           M +R++VSWT I+SA +Q G  ++ L +++DM   G  PN+  V S++  C ++GA + G
Sbjct: 356 MPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG 415

Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
              H    K+  +   FVG S++  Y K G       VF  +   D+  WNA++ G A  
Sbjct: 416 EQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQN 474

Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISI 283
           G G EA+ +   M  EGI  D+ +F+  L  CS     D G    + +  +  +   +  
Sbjct: 475 GLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYH 534

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
              ++D+  ++  +  A  + E M  K D + W  L G    ++N      L+H   L+ 
Sbjct: 535 YTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRN---NELLYHSEKLAV 591

Query: 343 -----SRPNHVTFSIL--LRQCG 358
                S PN     I+  LR CG
Sbjct: 592 VFGILSTPNGSPIQIIKNLRICG 614



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 7/185 (3%)

Query: 40  LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
           ++ + + +   LS   NL +  LG Q H  I KLGF   +F+ N+LI MY KCGY   G 
Sbjct: 392 IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GF 450

Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
            VF+EM E +L++W  ++    QNG     +K++  M+  G +P++ +   V+  C   G
Sbjct: 451 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 510

Query: 160 ASEFGYSIHCFALKIRIEKNPFV---GCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
             + G++ H  ++  +    P V    C V +   + G ++ AE +  ++    D   W 
Sbjct: 511 LVDEGWA-HFNSMTQKYGIMPLVYHYTCMV-DLLGRAGYLSEAEALIENMPVKPDSVIWE 568

Query: 216 AMIGG 220
           A++G 
Sbjct: 569 ALLGA 573


>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
          Length = 671

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 161/622 (25%), Positives = 309/622 (49%), Gaps = 15/622 (2%)

Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
           ++H  A+K+    + ++  ++L  Y   G +A A  VF  +   +V  W+ +I   +  G
Sbjct: 23  AVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLG 82

Query: 226 YGFEALNVVSSMLFEG--ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
              +AL++ + ML  G     + +T    + GC+   D   G Q+H   ++  V+   S+
Sbjct: 83  VLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESV 142

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS---LFHKFIL 340
              L+DMY K   +  +++ F     + V+SW ++      + + G   +   LF K ++
Sbjct: 143 AGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLV 202

Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
               P + TFS +L+       L  G Q+    +  G   +  + ++L+ M+ RCG ++ 
Sbjct: 203 LKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDE 262

Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
              +   + +   +    LL+ Y  N C+ + ++ F ++    + ++      +++ C  
Sbjct: 263 ITRLACRIRHDAFSR-TSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSS 321

Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
               ++V +IH   +K  F     + ++++  Y   G + +S    N  E  D  SW A+
Sbjct: 322 LGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381

Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
           ++  V    + EA+  F  +V  G +   + + ++L +C+A  +      IH  V+KLG 
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV 441

Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
           + +  V +A++  YAKCG ++ A   F+ + N   +I +N LI +++ HG    A+++FD
Sbjct: 442 DDDTSVENALVTMYAKCGVVQVALKIFNSTRNRG-IISWNALITSFSQHGNEVAAIQLFD 500

Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
            M+   + P   TFV ++S+CS  GLV +GC  FK M ++Y ++P  + Y C+VD+ +R 
Sbjct: 501 MMQEEMVCPDDYTFVGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARA 560

Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           G   DA   I+ MP QP   V+ +LL+ CR+HGN +LG  A++K+L + P++ + +++LS
Sbjct: 561 GRFSDAMKFIDAMPCQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILS 620

Query: 761 K--------RKRQREGNLLDHE 774
                     ++ R   LLD +
Sbjct: 621 SIHASIDMWDEKARNRTLLDFQ 642



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 146/627 (23%), Positives = 270/627 (43%), Gaps = 40/627 (6%)

Query: 66  VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
           VHG  VKLG     +L NNL+  Y   G+      VFDEM  RN+VSW++++ A+ + G 
Sbjct: 24  VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGV 83

Query: 126 FDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
               L ++  M   G    PN F V +++  C     +  G  +H  A+K+ ++++  V 
Sbjct: 84  LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143

Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG---GYAHCGYGFEALNVVSSMLFE 240
            ++++ YAK G V ++ R F       V  W +MI     +   GY   A+ +   ML  
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
            +     TF   L+   +      G+Q+HG +++   E   ++  AL+ MY +  GMD  
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEI 263

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            ++  R+   D  S  +L   ++ N    +   +F   ++     +    + LL+ C  L
Sbjct: 264 TRLACRI-RHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322

Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
             L +  ++ C AL   F  +  + ++++ ++ +CG +  +  VF+ +  K+  +W  LL
Sbjct: 323 GQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALL 382

Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
           + Y  N    + L  F  +   G+E +      V+  C  + +     QIH  ++K G  
Sbjct: 383 TCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVD 442

Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
               + ++L+  Y   G +  + +  N      + SW A++++    G+   A+ +F  +
Sbjct: 443 DDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMM 502

Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
            E    PD+Y    +L+SC+ +G                      VA         C   
Sbjct: 503 QEEMVCPDDYTFVGLLSSCSRMG---------------------LVAEG-------CEYF 534

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
           K  +  ++          Y  ++  +A  G  S+AM+  D M     QP Q  + +++++
Sbjct: 535 KQMKTKYNLEPKMEH---YTCMVDLFARAGRFSDAMKFIDAMP---CQPDQLVWEALLAS 588

Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSP 687
           C   G +D G +  K +       PSP
Sbjct: 589 CRVHGNLDLGRMAAKKILEIKPEDPSP 615



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/406 (24%), Positives = 187/406 (46%), Gaps = 4/406 (0%)

Query: 58  KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
           K  V G QVH   VKLG   D  +   L+ MY+KCG  G   R F    +R+++SWT ++
Sbjct: 119 KDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMI 178

Query: 118 SAAIQNGE---FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKI 174
           +  + +G+    D  + ++  M      P       ++KV         G  +H   +K+
Sbjct: 179 ACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKM 238

Query: 175 RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVV 234
             E +P +G ++L  Y + G +    R+   I  D      +++  YA  G   EA+ V 
Sbjct: 239 GTEVDPALGTALLAMYGRCGGMDEITRLACRIRHDAFS-RTSLLTAYARNGCNMEAVRVF 297

Query: 235 SSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
             ML   + +D+    + LQ CS +    + ++IH   +++       ++NA++ +Y K 
Sbjct: 298 RDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKC 357

Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
             +  +  VF  + +KD ISW  L   + +N    +    F + +  G   +    + +L
Sbjct: 358 GDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVL 417

Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
           R C     L  G Q+    +  G  D+ +V ++L+ M+ +CG V++A  +F++   + I 
Sbjct: 418 RACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGII 477

Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
           +WN L++ +  +  +   ++ F  + E  V  +  TF  ++ +C R
Sbjct: 478 SWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSR 523



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 9/302 (2%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER---NLVSWTLIVSA 119
           G QVHG +VK+G   D  L   L+AMY +CG    G+     +A R   +  S T +++A
Sbjct: 228 GKQVHGCLVKMGTEVDPALGTALLAMYGRCG----GMDEITRLACRIRHDAFSRTSLLTA 283

Query: 120 AIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
             +NG     ++++ DM   G MP ++ A+ S+++VC S+G       IHC+ALK     
Sbjct: 284 YARNGCNMEAVRVFRDMLM-GHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYALKNFFRL 342

Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
           +  +  +++  Y K GD+A++E VF ++ + D   W A++  Y       EAL     M+
Sbjct: 343 DTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEALFFFREMV 402

Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
            +G+    +   + L+ CS  +    G QIH  +++  V+   S+ NAL+ MY K   + 
Sbjct: 403 RKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQ 462

Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
            A K+F    ++ +ISWN L   FS++ N      LF         P+  TF  LL  C 
Sbjct: 463 VALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCS 522

Query: 359 KL 360
           ++
Sbjct: 523 RM 524



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 16/450 (3%)

Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSEN 325
           R +HG  ++     S  + N L+  Y     +  A  VF+ M  ++V+SW+ L    S  
Sbjct: 22  RAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRL 81

Query: 326 KNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
              G   SLF   +  G   RPN  T + L+  C +  D   G Q+   A+  G  ++E+
Sbjct: 82  GVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDES 141

Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF-NCCDADVLKT----FCN 438
           V  +L+ M+ +CG V  +   F     +++ +W  +++  C  N  D+    T    F  
Sbjct: 142 VAGTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIA--CLVNHGDSGYRDTAIVLFKK 199

Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
           +    V     TF  +++     E      Q+HG ++K G      + ++L+  Y   G 
Sbjct: 200 MLVLKVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGG 259

Query: 499 LDNSFEFSNGAERL--DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
           +D   E +  A R+  D  S  ++++A    G N EAV +F  ++      D+  + ++L
Sbjct: 260 MD---EITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLL 316

Query: 557 NSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
             C+++G  +  K IH + +K  F  +  + +A++  Y KCGDI  + + F+ +  + D 
Sbjct: 317 QVCSSLGQLRVVKEIHCYALKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFN-TLENKDT 375

Query: 617 IVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKS 676
           I +  L+  Y  + L  EA+  F +M    L+ S     SV+ ACS    +  G  +   
Sbjct: 376 ISWTALLTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSR 435

Query: 677 MDSQYGMQPSPDCYGCLVDMLSRNGYLEDA 706
           +  + G+         LV M ++ G ++ A
Sbjct: 436 V-VKLGVDDDTSVENALVTMYAKCGVVQVA 464



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 54/97 (55%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G Q+H  +VKLG  +D  ++N L+ MY+KCG     L++F+    R ++SW  ++++  Q
Sbjct: 429 GWQIHSRVVKLGVDDDTSVENALVTMYAKCGVVQVALKIFNSTRNRGIISWNALITSFSQ 488

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
           +G     ++++  M+     P+++    ++  C  MG
Sbjct: 489 HGNEVAAIQLFDMMQEEMVCPDDYTFVGLLSSCSRMG 525



 Score = 46.2 bits (108), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 5/172 (2%)

Query: 565 YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIM 624
           +   +++H   +KLG     Y+ + ++ +Y   G +  AR  FD+    N V+ ++ LI+
Sbjct: 18  HSHPRAVHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRN-VVSWSVLIV 76

Query: 625 AYAHHGLVSEAMEIFDKMKLANL--QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYG 682
           A +  G++ +A+ +F  M       +P+  T  ++++ C+       G  +  S   + G
Sbjct: 77  ASSRLGVLGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASA-VKLG 135

Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
           +       G LVDM ++ G +  +     + P Q S   + S+++    HG+
Sbjct: 136 VDEDESVAGTLVDMYAKCGRVGSSWRAFVLTP-QRSVLSWTSMIACLVNHGD 186


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 188/664 (28%), Positives = 315/664 (47%), Gaps = 49/664 (7%)

Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
           T+   P   ++   + V    G +    ++H   LK R E++  +  ++++ Y KL    
Sbjct: 57  THYLPPESHSLLHALHVSSRSGDTHLAKTVHATLLK-RDEEDTHLSNALISTYLKLNLFP 115

Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGC 256
            A R+F S+ S +V  +  +I  +        AL++   M     +  ++YT++  L  C
Sbjct: 116 HALRLFLSLPSPNVVSYTTLIS-FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTAC 174

Query: 257 S-LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISW 315
           S L+  F  G Q+H   +++    S  + NAL+ +Y K +    A K+F ++  +D+ SW
Sbjct: 175 SSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASW 234

Query: 316 NTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
           NT+     ++        LF     + + R +  T SILL     L++   G Q+   A+
Sbjct: 235 NTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME---GQQVHAHAV 291

Query: 375 HCGFLDEENVTSSLIYMFCRCGAVE-------------------------------MAHS 403
             G   + NV + LI  + + G V+                               +A  
Sbjct: 292 KLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALK 351

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           VFD +  KN  ++N +L+G+C N    + ++ F  + E G+E+   +   VV+ C    +
Sbjct: 352 VFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGD 411

Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS--WGAMM 521
            ++  Q+HG  +K GF S GY+ ++L+  Y   G++ ++ +     E  + +S  W AM+
Sbjct: 412 YKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMI 471

Query: 522 SALVHQGHNHEAVTIFHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIK--L 578
                 G   EA+ +FH     G+   DE    ++L  C  IG     K IH  VIK  L
Sbjct: 472 CGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGL 531

Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
           GFN EV   +AV+  Y KCG +  A   F       D++ +NTLI     H     A+EI
Sbjct: 532 GFNLEV--GNAVVSMYFKCGSVDDAMKVFGD-MPCTDIVTWNTLISGNLMHRQGDRALEI 588

Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGL--VDKGCLLFKSMDSQYGMQPSPDCYGCLVDM 696
           + +M    ++P+Q TFV ++SA     L  VD    LF SM + Y ++P+   Y   + +
Sbjct: 589 WVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISV 648

Query: 697 LSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
           L   G L++A   I  MPFQPS  V+R LL GCR+H N+ +G+WA++ +L L PK+ +  
Sbjct: 649 LGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTF 708

Query: 757 VLLS 760
           +L+S
Sbjct: 709 ILVS 712



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 156/715 (21%), Positives = 291/715 (40%), Gaps = 82/715 (11%)

Query: 39  FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
           +L  +   L  +L +S       L   VH  ++K     D  L N LI+ Y K   F   
Sbjct: 59  YLPPESHSLLHALHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHA 117

Query: 99  LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVS 157
           LR+F  +   N+VS+T ++S   ++ +    L +++ M T   + PNE+   +V+  C S
Sbjct: 118 LRLFLSLPSPNVVSYTTLISFLSKHRQHH-ALHLFLRMTTRSHLPPNEYTYVAVLTACSS 176

Query: 158 MGAS-EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
           +     FG  +H  ALK     +PFV  ++++ YAK     AA ++F  I   D+  WN 
Sbjct: 177 LLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNT 236

Query: 217 MIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
           +I           A  +  +M   +   +D +T    L   + + +   G+Q+H   ++ 
Sbjct: 237 IISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME---GQQVHAHAVKL 293

Query: 276 EVECSISIVNALIDMYIKSSGMD-------------------------------YAFKVF 304
            +E  +++ N LI  Y K   +D                                A KVF
Sbjct: 294 GLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVF 353

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
           + M +K+ +S+NT+  GF  N+   +   LF + +  G      + + ++  CG L D  
Sbjct: 354 DEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYK 413

Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT--WNELLSG 422
           +  Q+   A+  GF     V ++L+ M+ RCG +  A  +F     +  ++  W  ++ G
Sbjct: 414 VSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICG 473

Query: 423 YCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           Y  N    + +  F      G V ++      ++  C    +  M  QIH  +IK G   
Sbjct: 474 YARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGF 533

Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
              + ++++  Y   G +D++ +        D+ +W  ++S  +       A+ I+  ++
Sbjct: 534 NLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEML 593

Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI- 600
             G KP++     I      I AY++T                      ++    C ++ 
Sbjct: 594 GEGIKPNQVTFVLI------ISAYRQTN---------------------LNLVDDCRNLF 626

Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
              R  +     S     Y + I    H GL+ EA+E  + M     QPS   +  ++  
Sbjct: 627 NSMRTVYQIEPTSRH---YASFISVLGHWGLLQEALETINNMP---FQPSALVWRVLLDG 680

Query: 661 CSHKGLVDKGCLLFK-SMDSQYGMQPS-PDCYGCLVDMLSRNGYLEDAKHVIEIM 713
           C     + K  L+ K +  +   ++P  P  +  + ++ S +G  + ++ V E M
Sbjct: 681 CR----LHKNELIGKWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDM 731



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 45/365 (12%)

Query: 27  RLCGNNQFCSDSFLRKD---PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQN 83
           RL  N Q  +D+F   D    I L  S SL E       G QVH H VKLG   D+ + N
Sbjct: 252 RLFRNMQ-ATDAFRVDDFTLSILLTASASLME-------GQQVHAHAVKLGLETDLNVGN 303

Query: 84  NLIAMYSKCG--------------------------YFGWGL-----RVFDEMAERNLVS 112
            LI  YSK G                          Y  +GL     +VFDEM E+N VS
Sbjct: 304 GLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVS 363

Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
           +  +++   +N +    ++++V M   G    +F++ SV+  C  +G  +    +H FA+
Sbjct: 364 YNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAV 423

Query: 173 KIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG--CWNAMIGGYAHCGYGFEA 230
           K     N +V  ++L+ Y + G +  A ++F     ++     W AMI GYA  G   EA
Sbjct: 424 KFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEA 483

Query: 231 LNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
           + +      +G + MD+    + L  C  +   D+G+QIH  +I+  +  ++ + NA++ 
Sbjct: 484 IYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVS 543

Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVT 349
           MY K   +D A KVF  M   D+++WNTL  G   ++   +   ++ + +  G +PN VT
Sbjct: 544 MYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVT 603

Query: 350 FSILL 354
           F +++
Sbjct: 604 FVLII 608


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 248/476 (52%), Gaps = 3/476 (0%)

Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
           ++  Y +   +    K F+ M   D++SWN L   +  N++  +    F   +L G  P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 347 HVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
            V  SI L  C    ++ +G  +Q   L  G  +E  V ++L+ M+ + G    A SVF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 407 NVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM 466
            +S++++  W+ +++ Y  N    + L  F  +   GV  N  T    ++ C    + + 
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
              +H  +   G  S   + ++L+  Y   G+++ + E        ++ +W A+ +A   
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 527 QGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPF--VIKLGFNTEV 584
              N +A+ + H +   G  P+     ++L++CAAI A ++ + IH    V+  G  ++V
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
           YV +A+++ Y+KCG++  A   FD+     D++++N+LI   A HG   +A+E+F++M+L
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDK-IAHLDLVLWNSLIATNAQHGQTEKALELFERMRL 359

Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
             LQP+  TF SV+ ACSH G++D+G   F S    +G+ P  + +GC+VD+L R G++ 
Sbjct: 360 EGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIV 419

Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           D++ ++  MPF+P P  + + L  CR + N +   WA+E L  L P+  A +VLLS
Sbjct: 420 DSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLS 475



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 178/376 (47%), Gaps = 2/376 (0%)

Query: 85  LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
           +++ YS+ G      + FDEM   ++VSW  +++A I N +FD     +  M   G  P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
           E  +   +  C        G SI    L   IE+   V  ++++ Y KLG    A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
            +S  DV  W+AM+  YA  G+  EAL +   M  +G+  +K T ++ L  C+ + D   
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
           G  +H  +    ++  + +  AL+++Y K   ++ A + F ++ +K+V++W+ +   ++ 
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL--QCLALHCGFLDEE 382
           N        + H+  L G  PN  TF  +L  C  +  L  G ++  +   L  G   + 
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
            V ++L+ M+ +CG + +A  +FD +++ ++  WN L++    +      L+ F  +   
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 443 GVEVNGCTFFYVVETC 458
           G++    TF  V+  C
Sbjct: 361 GLQPTIITFTSVLFAC 376



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
           LS   + +   +G  +   I+  G   +  +Q  L++MY K G+      VF  M+ R++
Sbjct: 68  LSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDV 127

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           V+W+ +V+A  +NG     L ++  M  +G  PN+  + S +  C S+G    G  +H  
Sbjct: 128 VAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQR 187

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
                I+    VG +++N Y K G + AA   F  I   +V  W+A+   YA      +A
Sbjct: 188 VEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDA 247

Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIH--GLIIRSEVECSISIVNALI 288
           + V+  M  EG+  +  TF++ L  C+ +A    GR+IH    ++   +E  + ++ AL+
Sbjct: 248 IRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALV 307

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
           +MY K   +  A  +F+++A  D++ WN+L    +++    +   LF +  L G +P  +
Sbjct: 308 NMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTII 367

Query: 349 TFSILLRQCGKLLDLDLG 366
           TF+ +L  C     LD G
Sbjct: 368 TFTSVLFACSHAGMLDQG 385



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 2/207 (0%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  +   G  + + +   L+ +Y KCG     +  F ++ E+N+V+W+ I +A  +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIH--CFALKIRIEKNP 180
           N      +++   M   G +PN     SV+  C ++ A + G  IH     L   +E + 
Sbjct: 241 NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDV 300

Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
           +V  +++N Y+K G++A A  +F  I+  D+  WN++I   A  G   +AL +   M  E
Sbjct: 301 YVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLE 360

Query: 241 GITMDKYTFINALQGCSLVADFDIGRQ 267
           G+     TF + L  CS     D GR+
Sbjct: 361 GLQPTIITFTSVLFACSHAGMLDQGRK 387


>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 261/511 (51%), Gaps = 17/511 (3%)

Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
           L+ C+  +  +   Q+H  IIR  +     I++  + +    S   Y   VF  ++    
Sbjct: 32  LKACTTTSTLE---QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPST 88

Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
           + WNT   G+SEN +   T SLF +   S + P+  T+  L++ C K+  +  G+     
Sbjct: 89  VLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGS 148

Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
           A+ CG   +  V +SLI ++ +CG +  A  VFD +  +N+ +W  +++GY       + 
Sbjct: 149 AVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEA 208

Query: 433 LKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            K F  + E + V  N     YV     RS  +      H  ++           +++I 
Sbjct: 209 RKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNVVSF---------TTMID 259

Query: 492 SYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
            Y   G + ++ F F    ER D+ +W A++S  V  G  +EAV IF  +     KPDE+
Sbjct: 260 GYAKSGDMASARFVFEEAPER-DVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318

Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQ 609
           I+ +++++C+ +G+ +  K +  +V K   +    +V +A+ID  AKCG +  A   F++
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEE 378

Query: 610 SFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK 669
                D+I Y +++   + HG   +A+ +F +M    L P    F  +++ACS  GLVD+
Sbjct: 379 -MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 437

Query: 670 GCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
           GC  F+SM + Y + PSPD Y C+VD+L R G L++A  +++ MP +P    + +LL  C
Sbjct: 438 GCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGAC 497

Query: 730 RIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           ++H + ELGE  +++L  L P+N   +VLLS
Sbjct: 498 KLHCDIELGEVVADQLFELEPQNAGNYVLLS 528



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 176/374 (47%), Gaps = 14/374 (3%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G   HG  V+ G   D+F+  +LI +Y KCG      +VFDEM ERN+VSWT +++    
Sbjct: 142 GVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYAS 201

Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
             +     K++ +M + N    N    G V    +      F    H         +N  
Sbjct: 202 FSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPH---------RNVV 252

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
              ++++ YAK GD+A+A  VF      DV  W+A+I GY   G   EA+ +   M    
Sbjct: 253 SFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRN 312

Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS-IVNALIDMYIKSSGMDYA 300
           +  D++  ++ +  CS +   ++ + +   + +S ++   + ++ ALIDM  K   MD A
Sbjct: 313 VKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRA 372

Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
            K+FE M  +D+IS+ ++  G S +    Q  SLF + +  G  P+ V F+++L  C + 
Sbjct: 373 TKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRA 432

Query: 361 LDLDLG-LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNE 418
             +D G    + +      +   +  + ++ +  R G ++ A+ +  ++  + +   W  
Sbjct: 433 GLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGA 492

Query: 419 LLSGYCFNCCDADV 432
           LL G C   CD ++
Sbjct: 493 LL-GACKLHCDIEL 505



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/399 (22%), Positives = 182/399 (45%), Gaps = 11/399 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
           QVH  I++ G   D F+ +  + + +    F +   VF+ ++  + V W   +    +N 
Sbjct: 43  QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENY 102

Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
              + + +++ MK +  +P++F   S++K C  +   + G + H  A++  +  + FV  
Sbjct: 103 SVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMT 162

Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
           S+++ Y K G++  A +VF  +   +V  W AMI GYA     F  L V +  LF+ +  
Sbjct: 163 SLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYA----SFSDL-VEARKLFDEMPE 217

Query: 245 DKYTFINA-LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
                 NA + G     D    R++   +    V   +S    +ID Y KS  M  A  V
Sbjct: 218 KNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNV---VSFTT-MIDGYAKSGDMASARFV 273

Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
           FE   ++DV++W+ L  G+ +N  P +   +F +      +P+      L+  C ++  L
Sbjct: 274 FEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQMGSL 333

Query: 364 DLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           +L   +          +   +V ++LI M  +CG+++ A  +F+ +  +++ ++  ++ G
Sbjct: 334 ELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQG 393

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
              + C    +  F  +   G+  +   F  ++  C R+
Sbjct: 394 LSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRA 432


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 259/506 (51%), Gaps = 39/506 (7%)

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF-ILSGSRPNHVTFSILLRQCGKLL 361
           VF ++ +      N L    S +  P +T  L+H    ++    +  +F  LL+   K+ 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
             + GL++  LA   GF+D+  + + LI M+  C  +  A  +FD + + +   WN ++ 
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195

Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
           GYC N    D L+ F ++  S ++ +      V+  C  + N      IH  +   G++ 
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255

Query: 482 CGYICSSLIKSYVNFGQLD--------------------------------NSFEFSNGA 509
             ++ ++LI  Y N G +D                                  F F    
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315

Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
           ER D+  W AM+S         EA+ +F  +++    PD+  + +++++C+ +GA  +  
Sbjct: 316 ER-DLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 570 SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHH 629
            IH +V + GF   + V +A+ID YAKCG++  AR  F+     N VI ++++I A+A H
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKN-VISWSSMINAFAMH 433

Query: 630 GLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
           G    A+++F +MK  N++P+  TF+ V+ AC H GLV++G  LF SM +++G+ P+ + 
Sbjct: 434 GNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREH 493

Query: 690 YGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLL 749
           YGC+VD+  R  +L  A  +IE MPF P+  ++ SL+S C++HG  ELGE+A+++LL L 
Sbjct: 494 YGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELE 553

Query: 750 PKNDAAHVLLS----KRKRQREGNLL 771
           P +D A V+LS    K KR  +  L+
Sbjct: 554 PDHDGALVVLSNIYAKEKRWNDVGLI 579



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 185/398 (46%), Gaps = 43/398 (10%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G ++HG   KLGF +D F+Q  LIAMY+ C        +FD+M   + V+W +I+    Q
Sbjct: 140 GLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQ 199

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA----------- 171
           NG +D  L+++ DM+++   P+   + +V+  C   G   +G +IH F            
Sbjct: 200 NGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHL 259

Query: 172 ---------------LKIRI-----EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV 211
                          L  +I      K+  V  ++L+ YAKLG V  A  +F  +   D+
Sbjct: 260 QTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDL 319

Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
            CW+AMI GYA      EAL +   ML +    D+ T ++ +  CS V        IH  
Sbjct: 320 VCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTY 379

Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQT 331
           + RS    ++S+ NALIDMY K   +  A +VFE M  K+VISW+++   F+ + N    
Sbjct: 380 VDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSA 439

Query: 332 ASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSS---- 387
             LF +       PN VTF  +L  CG       GL  +   L    ++E  ++ +    
Sbjct: 440 IKLFRRMKEVNIEPNGVTFIGVLYACGH-----AGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 388 --LIYMFCRCGAVEMAHSVFDNVSY-KNITTWNELLSG 422
             ++ ++CR   +  A  + + + +  N+  W  L+S 
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSA 532


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/632 (26%), Positives = 312/632 (49%), Gaps = 16/632 (2%)

Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL--GDV 196
           + + P E AV  ++++  +   +E    +H   L     ++  +   ++  YA++  G +
Sbjct: 53  SSYGPRE-AVALLLRLQSAPALTEV-RRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGL 110

Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQG 255
             A RVF  + + +   WNA+I G    G   EAL     M+ +G +  D++T+   L+ 
Sbjct: 111 GHAVRVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKA 170

Query: 256 CSLVADFDIGRQIH----GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKD 311
           C+ + + + GR++       I R   + ++ +  AL+DM+ K   +  A  +FE M  +D
Sbjct: 171 CAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRD 230

Query: 312 VISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQC 371
           + SW  + GG     +  +  +L  +    G RP+ + F+ ++  CGK+ +L  G+ L  
Sbjct: 231 LASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHG 290

Query: 372 LALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDAD 431
            A+ CG  D+  V ++L+ M+C+C  ++MA S+F ++ +K++ +W+ +++G+  N     
Sbjct: 291 YAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNV 350

Query: 432 VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
            +  F  +  SG++ N  T   ++ +       +   +IH   ++       ++ S+LI 
Sbjct: 351 SVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALID 410

Query: 492 SYVNFGQLDNS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
            Y   G + ++   FEF     + D+    +M+   V    +  A+ +  +L++ G +PD
Sbjct: 411 FYCRQGYIRDAQIVFEFK---PKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPD 467

Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
              + ++L  C       + K +H + I+   ++   V +A+ D Y KCG ++ A   F 
Sbjct: 468 HVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIF- 526

Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
                 + + YNTLI +   HG   +A  +FD MK   + P + TFV+++S CSH GL+D
Sbjct: 527 LLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLID 586

Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
           KG   + SM   Y + P  + Y C+VD+ SR+G L+DA   I  +   P   V   LLS 
Sbjct: 587 KGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSA 646

Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
           CR H   ++ E  +E++    P +   H+LLS
Sbjct: 647 CRDHHRMDIAELVAERIFEQNPNDPGYHILLS 678



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/550 (25%), Positives = 252/550 (45%), Gaps = 14/550 (2%)

Query: 65  QVHGHIVKLGFTNDIFLQNNLIAMYSKC--GYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           ++H  ++  G+     L   L+  Y++   G  G  +RVFD M  RN  +W  ++   + 
Sbjct: 78  RLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLVD 137

Query: 123 NGEFDMGLKMYVDMKTNG-FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK--- 178
            G F   L+ Y DM  +G  + + F    V+K C ++G  E G  +    ++  I +   
Sbjct: 138 AGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQ-ENVETDIARGIA 196

Query: 179 --NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
             N FV C++++ +AK G +  A  +F S+   D+  W AMIGG    G   E + ++  
Sbjct: 197 KGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKR 256

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           M  EG   D   F   +  C  V +   G  +HG  ++  V   I + NAL+DMY K + 
Sbjct: 257 MKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCAR 316

Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
           +D A  +F  +  KDV SW+T+  G S+N+    + SLF + + SG +PN  T + +L  
Sbjct: 317 LDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPS 376

Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
             +L  L  G ++ C +L       E + S+LI  +CR G +  A  VF+     ++   
Sbjct: 377 ISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVL 436

Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           N ++ GY  N      L+    + + G+  +  T   V+  C +        ++H   I+
Sbjct: 437 NSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIR 496

Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
              SSC  + ++L   Y   G L+ + +        +  ++  ++S+L   GH  +A  +
Sbjct: 497 HNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFIL 556

Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK---LGFNTEVYVASAVIDA 593
           F  +   G  PD+     +L+ C+  G   +    +  +++   +  + E Y  S ++D 
Sbjct: 557 FDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHY--SCIVDL 614

Query: 594 YAKCGDIKGA 603
           Y++ G +  A
Sbjct: 615 YSRSGKLDDA 624



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 230/495 (46%), Gaps = 28/495 (5%)

Query: 44  PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
           P  L    +L E  + R +   V   I +     ++F+Q  L+ M++KCG  G    +F+
Sbjct: 165 PPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFE 224

Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
            M  R+L SWT ++  A++ G++   + +   MK+ GF P+     +V+  C  +     
Sbjct: 225 SMGVRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRT 284

Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
           G ++H +A+K  +  +  V  ++++ Y K   +  A  +F+SI   DV  W+ +I G++ 
Sbjct: 285 GMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQ 344

Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
                 ++++ + M+  GI  +  T  + L   S +     G++IH   +R+ +E S  +
Sbjct: 345 NRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFL 404

Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
            +ALID Y +   +  A  VFE     D++  N++  G+  NK+      L    +  G 
Sbjct: 405 ASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGL 464

Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
           RP+HVT   +L  C +   L  G +L   A+        +VT++L  M+C+CG +E+A+ 
Sbjct: 465 RPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANK 524

Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
           +F  ++ +N  T+N L+S    +         F  +   GV  +  TF  ++ +CC    
Sbjct: 525 IFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALL-SCCS--- 580

Query: 464 QQMVGQIHGAIIKTGFSSCGYIC--------------SSLIKSYVNFGQLDNSFEF-SNG 508
                  HG +I  G   C Y                S ++  Y   G+LD+++ F +N 
Sbjct: 581 -------HGGLIDKGL--CFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANL 631

Query: 509 AERLDMASWGAMMSA 523
            E  ++   G ++SA
Sbjct: 632 QEVPEIDVLGCLLSA 646



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 184/370 (49%), Gaps = 3/370 (0%)

Query: 41  RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
           R D +  A  +     +K    G  +HG+ VK G  +DI + N L+ MY KC        
Sbjct: 263 RPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAAS 322

Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
           +F  +  +++ SW+ I++   QN  +++ + ++ +M  +G  PN   + S++     +  
Sbjct: 323 LFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRL 382

Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
             +G  IHCF+L+ R+E + F+  ++++FY + G +  A+ VF     +D+   N+MI G
Sbjct: 383 LRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRG 442

Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
           Y        AL ++ ++L EG+  D  T ++ L  C+  +    G+++H   IR  +   
Sbjct: 443 YVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSC 502

Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
            S+ NAL DMY K   ++ A K+F  M +++ +++NTL     ++ +  Q   LF     
Sbjct: 503 FSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKR 562

Query: 341 SGSRPNHVTFSILLRQC--GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
            G  P+ VTF  LL  C  G L+D  L      L  +    D+E+  S ++ ++ R G +
Sbjct: 563 DGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDKEHY-SCIVDLYSRSGKL 621

Query: 399 EMAHSVFDNV 408
           + A S   N+
Sbjct: 622 DDAWSFIANL 631



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/265 (21%), Positives = 115/265 (43%), Gaps = 1/265 (0%)

Query: 38  SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
           S ++ +   +A  L     L+    G ++H   ++    +  FL + LI  Y + GY   
Sbjct: 361 SGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRD 420

Query: 98  GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
              VF+   + +LV    ++   + N + +  L++   +   G  P+   V SV+ +C  
Sbjct: 421 AQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQ 480

Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
                 G  +H +A++  I     V  ++ + Y K G +  A ++F  ++  +   +N +
Sbjct: 481 PSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTL 540

Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-E 276
           I      G+  +A  +   M  +G++ DK TF+  L  CS     D G   +  ++R   
Sbjct: 541 ISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYN 600

Query: 277 VECSISIVNALIDMYIKSSGMDYAF 301
           +       + ++D+Y +S  +D A+
Sbjct: 601 IPPDKEHYSCIVDLYSRSGKLDDAW 625


>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
 gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g05240
 gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
          Length = 565

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 261/503 (51%), Gaps = 16/503 (3%)

Query: 249 FINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI---KSSGMDYAFKVFE 305
            ++ L+ C  + + +   Q+HGL+I+S V  ++  ++ LID      ++  + YA  VFE
Sbjct: 9   ILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFE 65

Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDL 365
            +    V  WN++  G+S + NP +    + + +  G  P++ TF  +L+ C  L D+  
Sbjct: 66  SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125

Query: 366 GLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCF 425
           G  +    +  GF     V++ L++M+  CG V     VF+++   N+  W  L+SG+  
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185

Query: 426 NCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-----S 480
           N   +D ++ F  +  +GV+ N      ++  C R ++       HG +   GF     S
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245

Query: 481 SCGY---ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
             G+   + +SLI  Y   G L  +    +G     + SW ++++     G   EA+ +F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305

Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
             +++ G  PD+    +++ +    G  Q  +SIH +V K GF  +  +  A+++ YAK 
Sbjct: 306 LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 365

Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK-LANLQPSQATFVS 656
           GD + A+ AF +     D I +  +I+  A HG  +EA+ IF +M+   N  P   T++ 
Sbjct: 366 GDAESAKKAF-EDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLG 424

Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
           V+ ACSH GLV++G   F  M   +G++P+ + YGC+VD+LSR G  E+A+ +++ MP +
Sbjct: 425 VLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVK 484

Query: 717 PSPTVYRSLLSGCRIHGNKELGE 739
           P+  ++ +LL+GC IH N EL +
Sbjct: 485 PNVNIWGALLNGCDIHENLELTD 507



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 210/467 (44%), Gaps = 14/467 (2%)

Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
           +++ A  VF SI    V  WN+MI GY++     +AL     ML +G + D +TF   L+
Sbjct: 56  NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115

Query: 255 GCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVIS 314
            CS + D   G  +HG ++++  E ++ +   L+ MY+    ++Y  +VFE +   +V++
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175

Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ----LQ 370
           W +L  GF  N         F +   +G + N      LL  CG+  D+  G      LQ
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235

Query: 371 CLALHCGFLDEEN----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
            L     F  +      + +SLI M+ +CG +  A  +FD +  + + +WN +++GY  N
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295

Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
               + L  F ++ + G+  +  TF  V+         Q+   IH  + KTGF     I 
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355

Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE- 545
            +L+  Y   G  +++ +     E+ D  +W  ++  L   GH +EA++IF  + E G  
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNA 415

Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGAR 604
            PD      +L +C+ IG  +  +     +  L G    V     ++D  ++ G  + A 
Sbjct: 416 TPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAE 475

Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ 651
                     +V ++  L+     H    E +E+ D+++    +P +
Sbjct: 476 RLVKTMPVKPNVNIWGALLNGCDIH----ENLELTDRIRSMVAEPEE 518



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 183/378 (48%), Gaps = 13/378 (3%)

Query: 57  LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
           L+    G+ VHG +VK GF  ++++   L+ MY  CG   +GLRVF+++ + N+V+W  +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179

Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFA----- 171
           +S  + N  F   ++ + +M++NG   NE  +  ++  C        G   H F      
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGF 239

Query: 172 ---LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
               + ++  N  +  S+++ YAK GD+  A  +F  +    +  WN++I GY+  G   
Sbjct: 240 DPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAE 299

Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALI 288
           EAL +   ML  GI  DK TF++ ++   +     +G+ IH  + ++      +IV AL+
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359

Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNH 347
           +MY K+   + A K FE +  KD I+W  +  G + + +  +  S+F +    G + P+ 
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419

Query: 348 VTFSILLRQCGKLLDLDLGLQL--QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
           +T+  +L  C  +  ++ G +   +   LH G          ++ +  R G  E A  + 
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLH-GLEPTVEHYGCMVDILSRAGRFEEAERLV 478

Query: 406 DNVSYK-NITTWNELLSG 422
             +  K N+  W  LL+G
Sbjct: 479 KTMPVKPNVNIWGALLNG 496



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 131/570 (22%), Positives = 237/570 (41%), Gaps = 51/570 (8%)

Query: 51  LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAE 107
           LS  EN +S V   Q+HG ++K     ++   + LI   + C       +   VF+ +  
Sbjct: 10  LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69

Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
            ++  W  ++     +   D  L  Y +M   G+ P+ F    V+K C  +   +FG  +
Sbjct: 70  PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129

Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
           H F +K   E N +V   +L+ Y   G+V    RVF  I   +V  W ++I G+ +    
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189

Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI--------IRSEVEC 279
            +A+     M   G+  ++   ++ L  C    D   G+  HG +         +S+V  
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249

Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
           ++ +  +LIDMY K   +  A  +F+ M ++ ++SWN++  G+S+N +  +   +F   +
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309

Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
             G  P+ VTF  ++R         LG  +       GF+ +  +  +L+ M+ + G  E
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369

Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETC 458
            A   F+++  K+   W  ++ G   +    + L  F  + E G    +G T+  V+  C
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429

Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
                       H  +++ G            + Y  F ++ +        E      +G
Sbjct: 430 S-----------HIGLVEEG------------QRY--FAEMRDLHGLEPTVEH-----YG 459

Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
            M+  L   G   EA  +  ++     KP+  I G +LN C      + T  I   V + 
Sbjct: 460 CMVDILSRAGRFEEAERLVKTM---PVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEP 516

Query: 579 -GFNTEVYVASAVIDAYAKCG---DIKGAR 604
               + +YV  + I  YAK G   D+K  R
Sbjct: 517 EELGSGIYVLLSNI--YAKAGRWADVKLIR 544



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 158/346 (45%), Gaps = 34/346 (9%)

Query: 9   LFADKPSCHFHATRKRIHRLCGNNQFCSDSF----------LRKDPIFLAKSLSLSENLK 58
           +F D P  +  A    I     NN+F SD+           ++ +   +   L      K
Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRF-SDAIEAFREMQSNGVKANETIMVDLLVACGRCK 222

Query: 59  SRVLGTQVHGHIVKLGFTN--------DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
             V G   HG +  LGF          ++ L  +LI MY+KCG       +FD M ER L
Sbjct: 223 DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL 282

Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
           VSW  I++   QNG+ +  L M++DM   G  P++    SV++  +  G S+ G SIH +
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY 342

Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
             K    K+  + C+++N YAK GD  +A++ F  +   D   W  +I G A  G+G EA
Sbjct: 343 VSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEA 402

Query: 231 LNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIG-------RQIHGLIIRSEVECSIS 282
           L++   M  +G  T D  T++  L  CS +   + G       R +HGL      E ++ 
Sbjct: 403 LSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL------EPTVE 456

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVIS-WNTLFGGFSENKN 327
               ++D+  ++   + A ++ + M  K  ++ W  L  G   ++N
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHEN 502


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 281/552 (50%), Gaps = 42/552 (7%)

Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
           + + + NALQ C    +   G+ +H  I++      +   N L++MY+KS  +  A K+F
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLF 96

Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR-----QCGK 359
           + M +++ IS+ TL  G++E+    +   LF +    G   N   F+ +L+      CG 
Sbjct: 97  DEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCG- 155

Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
               +LG  +       G      V ++LI  +  CG V++A  VFD + YK++ +W  +
Sbjct: 156 ----ELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGM 211

Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
           ++ +  N C  + LK F  +   G + N  TF  V + C   E   +   +HG  +K+ +
Sbjct: 212 VTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY 271

Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
               Y+  +L+  Y   G +D++        + D+  W  M++       + EAV +F  
Sbjct: 272 ELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQ 331

Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
           + +A   P+++   ++L +CA +        IH  VIK+G +++V+V++A++D YAKCG 
Sbjct: 332 MRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGR 391

Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM----------------- 642
           ++ +   F +S + NDV  +NT+I+ +   G   +A+ +F  M                 
Sbjct: 392 MENSMELFAESPHRNDV-TWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450

Query: 643 ---KLANLQP-----------SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
               LA L+P            + TFV V+SAC++ GL+D+G   F SM   +G++P  +
Sbjct: 451 ACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 510

Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLL 748
            Y C+V +L R G+L+ A  +I+ +PFQPS  V+R+LL  C IH + ELG  +++++L +
Sbjct: 511 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 570

Query: 749 LPKNDAAHVLLS 760
            P++ A HVLLS
Sbjct: 571 EPQDKATHVLLS 582



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 205/414 (49%)

Query: 63  GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
           G  +H  I+K G   D+F  N L+ MY K  +     ++FDEM ERN +S+  ++    +
Sbjct: 57  GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116

Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
           +  F   ++++V +   G   N F   +++K+ VS    E G+ IH    K+  E N FV
Sbjct: 117 SVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFV 176

Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
           G ++++ Y+  G V  A  VF  I   D+  W  M+  +A      EAL + S M   G 
Sbjct: 177 GTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGF 236

Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
             + +TF +  + C  +  FD+G+ +HG  ++S  E  + +  AL+D+Y KS  +D A +
Sbjct: 237 KPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARR 296

Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
            FE +  KDVI W+ +   ++++    +   +F +   +   PN  TF+ +L+ C  +  
Sbjct: 297 AFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356

Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
           L+LG Q+ C  +  G   +  V+++L+ ++ +CG +E +  +F    ++N  TWN ++ G
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 416

Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
           +         L+ F N+ E  V+    T+   +  C      +   QIH   +K
Sbjct: 417 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK 470



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 195/415 (46%), Gaps = 34/415 (8%)

Query: 43  DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
           +P      L L  +     LG  +H  I KLG  ++ F+   LI  YS CG       VF
Sbjct: 138 NPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVF 197

Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
           D +  +++VSWT +V+   +N  F   LK++  M+  GF PN F   SV K C+ + A +
Sbjct: 198 DGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFD 257

Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
            G S+H  ALK R E + +VG ++L+ Y K GD+  A R F  I   DV  W+ MI  YA
Sbjct: 258 VGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYA 317

Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
                 EA+ +   M    +  +++TF + LQ C+ +   ++G QIH  +I+  +   + 
Sbjct: 318 QSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVF 377

Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
           + NAL+D+Y K   M+ + ++F     ++ ++WNT+  G  +  +  +   LF   +   
Sbjct: 378 VSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYR 437

Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL---------------HCGFLDEENV--- 384
            +   VT+S  LR C  L  L+ GLQ+  L +               + G LD+      
Sbjct: 438 VQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFT 497

Query: 385 --------------TSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWNELLSGYC 424
                          + ++++  R G ++ A  + D + ++ ++  W  LL G C
Sbjct: 498 SMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL-GAC 551



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/527 (23%), Positives = 241/527 (45%), Gaps = 16/527 (3%)

Query: 143 PNEF---AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
           P+EF   A  + ++ C+       G  +HC  LK     + F    +LN Y K   +  A
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
            ++F  +   +   +  +I GYA      EA+ +   +  EG  ++ + F   L+     
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVST 152

Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
              ++G  IH  I +   E +  +  ALID Y     +D A +VF+ +  KD++SW  + 
Sbjct: 153 DCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMV 212

Query: 320 GGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL 379
             F+EN    +   LF +  + G +PN+ TF+ + + C  L   D+G  +   AL   + 
Sbjct: 213 TCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYE 272

Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI 439
            +  V  +L+ ++ + G ++ A   F+ +  K++  W+ +++ Y  +    + ++ F  +
Sbjct: 273 LDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQM 332

Query: 440 WESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
            ++ V  N  TF  V++ C   E   +  QIH  +IK G  S  ++ ++L+  Y   G++
Sbjct: 333 RQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRM 392

Query: 500 DNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
           +NS E F+    R D+ +W  ++   V  G   +A+ +F +++E   +  E    + L +
Sbjct: 393 ENSMELFAESPHRNDV-TWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 451

Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
           CA++ A +    IH   +K    T V V SA  +A    G +   +  F      + +  
Sbjct: 452 CASLAALEPGLQIHSLTVKPDKLTFVGVLSACANA----GLLDQGQAYFTSMIQDHGIEP 507

Query: 619 ----YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
               Y  ++      G + +A+++ D++     QPS   + +++ AC
Sbjct: 508 CIEHYTCMVWLLGRGGHLDKAVKLIDEIP---FQPSVMVWRALLGAC 551



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 169/349 (48%), Gaps = 3/349 (0%)

Query: 316 NTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA 373
           N     FS      Q+A L  +F+  +S S  N   ++  L+ C +  +   G  L C  
Sbjct: 5   NNFLIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEI 64

Query: 374 LHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVL 433
           L  G   +    + L+ M+ +   +  A  +FD +  +N  ++  L+ GY  +    + +
Sbjct: 65  LKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAI 124

Query: 434 KTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSY 493
           + F  +   G E+N   F  +++    ++  ++   IH  I K G  S  ++ ++LI +Y
Sbjct: 125 ELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAY 184

Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
              G++D + E  +G    DM SW  M++         EA+ +F  +   G KP+ +   
Sbjct: 185 SVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFA 244

Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
           ++  +C  + A+   KS+H   +K  +  ++YV  A++D Y K GDI  AR AF++    
Sbjct: 245 SVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEE-IPK 303

Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
            DVI ++ +I  YA      EA+E+F +M+ A + P+Q TF SV+ AC+
Sbjct: 304 KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACA 352



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 124/264 (46%), Gaps = 18/264 (6%)

Query: 62  LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
           LG Q+H H++K+G  +D+F+ N L+ +Y+KCG     + +F E   RN V+W  ++   +
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHV 418

Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
           Q G+ +  L+++++M        E    S ++ C S+ A E G  IH  +L ++ +K  F
Sbjct: 419 QLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIH--SLTVKPDKLTF 476

Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDD-----VGCWNAMIGGYAHCGYGFEALNVVSS 236
           VG  VL+  A  G +   +  F S+  D      +  +  M+      G+  +A+ ++  
Sbjct: 477 VG--VLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDE 534

Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
           + F+   M     + A   C +  D ++GR     ++  E +   + V  L +MY  +  
Sbjct: 535 IPFQPSVMVWRALLGA---CVIHNDIELGRISAQRVLEMEPQDKATHV-LLSNMYATAKR 590

Query: 297 MDYAFKVFERMADKDV-----ISW 315
            D    V + M  K V     +SW
Sbjct: 591 WDNVASVRKNMKRKGVKKEPGLSW 614


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.138    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,017,146,492
Number of Sequences: 23463169
Number of extensions: 493560701
Number of successful extensions: 1471464
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8082
Number of HSP's successfully gapped in prelim test: 3205
Number of HSP's that attempted gapping in prelim test: 1234907
Number of HSP's gapped (non-prelim): 82629
length of query: 796
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 645
effective length of database: 8,816,256,848
effective search space: 5686485666960
effective search space used: 5686485666960
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 81 (35.8 bits)