BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036290
(796 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/679 (31%), Positives = 372/679 (54%), Gaps = 3/679 (0%)
Query: 84 NLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP 143
+I Y + G +F EM+ ++V+W +++S + G + ++ + +M+ +
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 144 NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF 203
+GSV+ + + G +H A+K+ + N +VG S+++ Y+K + AA +VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 204 YSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
++ + WNAMI GYAH G + + + M G +D +TF + L C+ D +
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFS 323
+G Q H +II+ ++ ++ + NAL+DMY K ++ A ++FERM D+D ++WNT+ G +
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
+++N + LF + L G + + L+ C + L G Q+ CL++ CG + +
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
SSLI M+ +CG ++ A VF ++ ++ + N L++GY N + V+ F + G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRG 624
Query: 444 VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVN-FGQLDN 501
V + TF +VE C + E+ + Q HG I K GFSS G Y+ SL+ Y+N G +
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA 684
Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAA 561
FS + + W MMS G EA+ + + G PD+ T+L C+
Sbjct: 685 CALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSV 744
Query: 562 IGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNT 621
+ + + ++IH + L + + ++ +ID YAKCGD+KG+ FD+ ++V+ +N+
Sbjct: 745 LSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNS 804
Query: 622 LIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY 681
LI YA +G +A++IFD M+ +++ P + TF+ V++ACSH G V G +F+ M QY
Sbjct: 805 LINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQY 864
Query: 682 GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
G++ D C+VD+L R GYL++A IE +P ++ SLL CRIHG+ GE +
Sbjct: 865 GIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEIS 924
Query: 742 SEKLLLLLPKNDAAHVLLS 760
+EKL+ L P+N +A+VLLS
Sbjct: 925 AEKLIELEPQNSSAYVLLS 943
Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/604 (26%), Positives = 276/604 (45%), Gaps = 41/604 (6%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
+G VH + LG ++ L N ++ +Y+KC + + FD + E+++ +W ++S
Sbjct: 78 IGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYS 136
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
G+ L+ +V + N PN+F V+ C EFG IHC +K+ +E+N +
Sbjct: 137 SIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSY 196
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
G ++++ YAK ++ A RVF I + CW + GY G EA+ V M EG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
D F+ +I+ YI+ + A
Sbjct: 257 HRPDHLAFVT-----------------------------------VINTYIRLGKLKDAR 281
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
+F M+ DV++WN + G + F S + T +L G +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
+LDLGL + A+ G V SSL+ M+ +C +E A VF+ + KN WN ++
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
GY N V++ F ++ SG ++ TF ++ TC S + +M Q H IIK +
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 482 CGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
++ ++L+ Y G L+++ + F +R D +W ++ + V + EA +F +
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDR-DNVTWNTIIGSYVQDENESEAFDLFKRM 520
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
G D L + L +C + + K +H +K G + +++ S++ID Y+KCG I
Sbjct: 521 NLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
K AR F S V+ N LI Y+ + L EA+ +F +M + PS+ TF +++ A
Sbjct: 581 KDARKVF-SSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638
Query: 661 CSHK 664
C HK
Sbjct: 639 C-HK 641
Score = 233 bits (593), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 165/631 (26%), Positives = 298/631 (47%), Gaps = 9/631 (1%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
LG VH +KLG ++I++ ++L++MYSKC +VF+ + E+N V W ++
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
NGE +++++DMK++G+ ++F S++ C + E G H +K ++ KN F
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
VG ++++ YAK G + A ++F + D WN +IG Y EA ++ M G
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG 524
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
I D + L+ C+ V G+Q+H L ++ ++ + ++LIDMY K + A
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
KVF + + V+S N L G+S+N N + LF + + G P+ +TF+ ++ C K
Sbjct: 585 KVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE 643
Query: 362 DLDLGLQLQCLALHCGFLDE-ENVTSSLIYMFCRCGAVEMAHSVFDNVSY-KNITTWNEL 419
L LG Q GF E E + SL+ M+ + A ++F +S K+I W +
Sbjct: 644 SLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGM 703
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
+SG+ N + LK + + GV + TF V+ C + + IH I
Sbjct: 704 MSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAH 763
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
++LI Y G + S + F R ++ SW ++++ G+ +A+ IF
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI-KLGFNTEVYVASAVIDAYAKC 597
S+ ++ PDE +L +C+ G + I +I + G V + ++D +
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQAT-FVS 656
G ++ A + D ++++L+ A HG + KL L+P ++ +V
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHG--DDIRGEISAEKLIELEPQNSSAYVL 941
Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
+ + + +G +K L K M + G++ P
Sbjct: 942 LSNIYASQGCWEKANALRKVMRDR-GVKKVP 971
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 265/588 (45%), Gaps = 57/588 (9%)
Query: 131 KMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
K++ K MP A+ A G ++H +L + I+ +G ++++ Y
Sbjct: 57 KLFKSRKVFDEMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
AK V+ AE+ F DV WN+M+ Y+ G + L S+ I +K+TF
Sbjct: 106 AKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
L C+ + + GRQIH +I+ +E + AL+DMY K + A +VFE + D
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDP 224
Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
+ + W LF G+ + P + +F + G RP+H+ F
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-------------------- 264
Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
++I + R G ++ A +F +S ++ WN ++SG+ C+
Sbjct: 265 ---------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309
Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
++ F N+ +S V+ T V+ N + +H IK G +S Y+ SSL+
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
Y +++ + + E + W AM+ H G +H+ + +F + +G D++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
++L++CAA + H +IK ++V +A++D YAKCG ++ AR F++
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
+ ++V +NT+I +Y SEA ++F +M L + A S + AC+H + +G
Sbjct: 490 CDRDNV-TWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG 548
Query: 671 ----CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
CL K G+ L+DM S+ G ++DA+ V +P
Sbjct: 549 KQVHCLSVKC-----GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 47 LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
LA +L ++ G QVH VK G D+ ++LI MYSKCG +VF +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
E ++VS +++ QN + + ++ +M T G P+E ++++ C + G
Sbjct: 592 EWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 167 IHCFALKIRI-EKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHC 224
H K + ++G S+L Y + A +F +SS + W M+ G++
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
G+ EAL M +G+ D+ TF+ L+ CS+++ GR IH LI +
Sbjct: 711 GFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS 770
Query: 285 NALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
N LIDMY K M + +VF+ M + +V+SWN+L G+++N +F S
Sbjct: 771 NTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHI 830
Query: 344 RPNHVTFSILLRQC---GKLLD 362
P+ +TF +L C GK+ D
Sbjct: 831 MPDEITFLGVLTACSHAGKVSD 852
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 4/160 (2%)
Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
K++H + LG ++E + +A++D YAKC + A FD F DV +N+++ Y+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD--FLEKDVTAWNSMLSMYSS 137
Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPD 688
G + + F + + P++ TF V+S C+ + V+ G + SM + G++ +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSY 196
Query: 689 CYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
C G LVDM ++ + DA+ V E + P+ + L SG
Sbjct: 197 CGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFSG 235
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/696 (30%), Positives = 363/696 (52%), Gaps = 1/696 (0%)
Query: 65 QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
Q+H I+ G + + N LI +YS+ G+ RVFD + ++ SW ++S +N
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 125 EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
++++ DM G MP +A SV+ C + + E G +H LK+ + +V
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
++++ Y LG++ +AE +F ++S D +N +I G + CGYG +A+ + M +G+
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
D T + + CS G+Q+H + + I AL+++Y K + ++ A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
++V+ WN + + + + +F + + PN T+ +L+ C +L DL+
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
LG Q+ + F V S LI M+ + G ++ A + + K++ +W +++GY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
D L TF + + G+ + V C + + QIH +GFSS
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
++L+ Y G+++ S+ E D +W A++S G+N EA+ +F + G
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
+ + G+ + + + ++ K +H + K G+++E V +A+I YAKCG I A
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
F + N+V +N +I AY+ HG SEA++ FD+M +N++P+ T V V+SACSH
Sbjct: 748 KQFLEVSTKNEV-SWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHI 806
Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
GLVDKG F+SM+S+YG+ P P+ Y C+VDML+R G L AK I+ MP +P V+R+
Sbjct: 807 GLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRT 866
Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
LLS C +H N E+GE+A+ LL L P++ A +VLLS
Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLS 902
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/653 (25%), Positives = 298/653 (45%), Gaps = 6/653 (0%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G ++H I+KLG ++ L L Y G +VFDEM ER + +W ++
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIEKNP 180
++V M + PNE V++ C G+ F IH L + +
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDST 222
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
V +++ Y++ G V A RVF + D W AMI G + EA+ + M
Sbjct: 223 VVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL 282
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
GI Y F + L C + +IG Q+HGL+++ + NAL+ +Y + A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
+F M+ +D +++NTL G S+ + LF + L G P+ T + L+ C
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
L G QL GF + +L+ ++ +C +E A F +N+ WN +L
Sbjct: 403 GTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462
Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
Y + + F + + N T+ +++TC R + ++ QIH IIKT F
Sbjct: 463 VAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ 522
Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
Y+CS LI Y G+LD +++ D+ SW M++ + +A+T F +
Sbjct: 523 LNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQM 582
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
++ G + DE L +++CA + A + + IH GF++++ +A++ Y++CG I
Sbjct: 583 LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKI 642
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
+ + +AF+Q+ + D I +N L+ + G EA+ +F +M + + TF S + A
Sbjct: 643 EESYLAFEQT-EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEI 712
S + +G + ++ ++ G + L+ M ++ G + DA K +E+
Sbjct: 702 ASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Score = 253 bits (647), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 155/616 (25%), Positives = 293/616 (47%), Gaps = 8/616 (1%)
Query: 44 PIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFD 103
P + LS + ++S +G Q+HG ++KLGF++D ++ N L+++Y G +F
Sbjct: 288 PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
M++R+ V++ +++ Q G + ++++ M +G P+ + S++ C + G
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
G +H + K+ N + ++LN YAK D+ A F ++V WN M+ Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 224 CGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
+ + M E I ++YT+ + L+ C + D ++G QIH II++ + + +
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
+ LIDMY K +D A+ + R A KDV+SW T+ G+++ + + F + + G
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
R + V + + C L L G Q+ A GF + ++L+ ++ RCG +E ++
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYL 647
Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
F+ + WN L+SG+ + + + L+ F + G++ N TF V+ + N
Sbjct: 648 AFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETAN 707
Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
+ Q+H I KTG+ S +C++LI Y G + ++ + + SW A+++A
Sbjct: 708 MKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINA 767
Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR-TKSIHPFVIKLGFNT 582
G EA+ F ++ + +P+ L +L++C+ IG + + G +
Sbjct: 768 YSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP 827
Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI--FD 640
+ V+D + G + A+ + D +V+ TL+ A H + MEI F
Sbjct: 828 KPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH----KNMEIGEFA 883
Query: 641 KMKLANLQPSQ-ATFV 655
L L+P AT+V
Sbjct: 884 AHHLLELEPEDSATYV 899
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 130/480 (27%), Positives = 250/480 (52%), Gaps = 6/480 (1%)
Query: 234 VSSMLFEGITMDKYTFINALQGC-SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
+ S+ GI + T L+GC D GR++H I++ ++ + + L D Y+
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
+ AFKVF+ M ++ + +WN + + G+ LF + + PN TFS
Sbjct: 132 FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 353 LLRQC-GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK 411
+L C G + D+ Q+ L+ G D V + LI ++ R G V++A VFD + K
Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 251
Query: 412 NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIH 471
+ ++W ++SG N C+A+ ++ FC+++ G+ F V+ C + E+ ++ Q+H
Sbjct: 252 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 311
Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHN 530
G ++K GFSS Y+C++L+ Y + G L ++ FSN ++R D ++ +++ L G+
Sbjct: 312 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYG 370
Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
+A+ +F + G +PD L +++ +C+A G R + +H + KLGF + + A+
Sbjct: 371 EKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
++ YAKC DI+ A F ++ N V+++N +++AY + + IF +M++ + P+
Sbjct: 431 LNLYAKCADIETALDYFLETEVEN-VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
Q T+ S++ C G ++ G + + + Q + L+DM ++ G L+ A ++
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQI-IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 153/607 (25%), Positives = 271/607 (44%), Gaps = 13/607 (2%)
Query: 136 MKTNGFMPNEFAVGSVMKVCVSM-GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
++ G PN + +++ C+ G+ + G +H LK+ ++ N + + +FY G
Sbjct: 75 VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG 134
Query: 195 DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQ 254
D+ A +VF + + WN MI A E + M+ E +T ++ TF L+
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 255 GCS--LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
C VA FD+ QIH I+ + S + N LID+Y ++ +D A +VF+ + KD
Sbjct: 195 ACRGGSVA-FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
SW + G S+N+ + LF + G P FS +L C K+ L++G QL L
Sbjct: 254 SSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL 313
Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
L GF + V ++L+ ++ G + A +F N+S ++ T+N L++G
Sbjct: 314 VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKA 373
Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
++ F + G+E + T +V C Q+H K GF+S I +L+
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
Y ++ + ++ E ++ W M+ A + IF + P++Y
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
+IL +C +G + + IH +IK F YV S +ID YAK G + A + F
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR-FA 552
Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
DV+ + T+I Y + +A+ F +M ++ + + +SAC+ + +G
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-- 610
Query: 673 LFKSMDSQY---GMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGC 729
+ + +Q G LV + SR G +E++ E + + +L+SG
Sbjct: 611 --QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGF 667
Query: 730 RIHGNKE 736
+ GN E
Sbjct: 668 QQSGNNE 674
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 14/299 (4%)
Query: 37 DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
D +R D + L ++S L++ G Q+H GF++D+ QN L+ +YS+CG
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 97 WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
F++ + ++W +VS Q+G + L+++V M G N F GS +K
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
+ G +H K + V ++++ YAK G ++ AE+ F +S+ + WNA
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIH 269
+I Y+ G+G EAL+ M+ + + T + L CS + D G +
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 270 GLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKN 327
GL + E + +DM ++ + A + + M K D + W TL +KN
Sbjct: 824 GLSPKPEHYVCV------VDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKN 876
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 368/701 (52%), Gaps = 8/701 (1%)
Query: 66 VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
VHG I+ G D +L N LI +YS+ G + +VF++M ERNLVSW+ +VSA +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 126 FDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFV 182
++ L ++++ +T PNE+ + S ++ C + + + F +K +++ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
G +++FY K G++ A VF ++ W MI G G + +L + ++ + +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
D Y L CS++ + G+QIH I+R +E S++N LID Y+K + A K
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
+F M +K++ISW TL G+ +N + LF G +P+ S +L C L
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHA 365
Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
L G Q+ + ++ VT+SLI M+ +C + A VFD + ++ +N ++ G
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 423 YCFNCCDADV---LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
Y ++ L F ++ + + TF ++ + + QIHG + K G
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL 485
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
+ + S+LI Y N L +S + + D+ W +M + V Q N EA+ +F
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
L + E+PDE+ ++ + + + Q + H ++K G Y+ +A++D YAKCG
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
+ A AFD S S DV+ +N++I +YA+HG +A+++ +KM ++P+ TFV V+S
Sbjct: 606 PEDAHKAFD-SAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
ACSH GLV+ G F+ M ++G++P + Y C+V +L R G L A+ +IE MP +P+
Sbjct: 665 ACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA 723
Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
V+RSLLSGC GN EL E A+E +L PK+ + +LS
Sbjct: 724 IVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 120/399 (30%), Positives = 206/399 (51%), Gaps = 3/399 (0%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G Q+H HI++ G D L N LI Y KCG ++F+ M +N++SWT ++S Q
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
N ++++ M G P+ +A S++ C S+ A FG +H + +K + + +V
Sbjct: 328 NALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYV 387
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF---EALNVVSSMLF 239
S+++ YAK + A +VF ++ DV +NAMI GY+ G + EALN+ M F
Sbjct: 388 TNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRF 447
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
I TF++ L+ + + + +QIHGL+ + + I +ALID+Y +
Sbjct: 448 RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
+ VF+ M KD++ WN++F G+ + + +LF + LS RP+ TF+ ++ G
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
L + LG + C L G +T++L+ M+ +CG+ E AH FD+ + +++ WN +
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
+S Y + L+ + G+E N TF V+ C
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/612 (22%), Positives = 277/612 (45%), Gaps = 4/612 (0%)
Query: 58 KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
+ R + Q+ +VK GF D+++ LI Y K G + VFD + E++ V+WT ++
Sbjct: 162 RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMI 221
Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
S ++ G + L+++ + + +P+ + + +V+ C + E G IH L+ +E
Sbjct: 222 SGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281
Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
+ + +++ Y K G V AA ++F + + ++ W ++ GY EA+ + +SM
Sbjct: 282 MDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSM 341
Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM 297
G+ D Y + L C+ + G Q+H I++ + + N+LIDMY K +
Sbjct: 342 SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 298 DYAFKVFERMADKDVISWNTLFGGFSE---NKNPGQTASLFHKFILSGSRPNHVTFSILL 354
A KVF+ A DV+ +N + G+S + ++F RP+ +TF LL
Sbjct: 402 TDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
R L L L Q+ L G + S+LI ++ C ++ + VFD + K++
Sbjct: 462 RASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
WN + +GY + + L F + S + TF +V + Q+ + H +
Sbjct: 522 IWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAV 534
+K G YI ++L+ Y G +++ + + A D+ W +++S+ + G +A+
Sbjct: 582 LKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKAL 641
Query: 535 TIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAY 594
+ ++ G +P+ +L++C+ G + +++ G E ++
Sbjct: 642 QMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL 701
Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATF 654
+ G + AR ++ IV+ +L+ A G V E E +M + + +F
Sbjct: 702 GRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNV-ELAEHAAEMAILSDPKDSGSF 760
Query: 655 VSVMSACSHKGL 666
+ + + KG+
Sbjct: 761 TMLSNIYASKGM 772
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 361 bits (926), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 210/704 (29%), Positives = 368/704 (52%), Gaps = 11/704 (1%)
Query: 63 GTQVHGHIVKLGFTNDI-FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
G Q+H I K + ++ FL L+ MY KCG +VFDEM +R +W ++ A +
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
NGE L +Y +M+ G + +++K C + G +H +K+ F
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
+ ++++ YAK D++AA R+F D WN+++ Y+ G E L + M
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDY 299
G + YT ++AL C + +G++IH +++S S + + NALI MY + M
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
A ++ +M + DV++WN+L G+ +N + F I +G + + V+ + ++ G+
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
L +L G++L + G+ V ++LI M+ +C F + K++ +W +
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
++GY N C + L+ F ++ + +E++ ++ ++ +V +IH I++ G
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 480 SSCGYICSSLIKSY---VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
I + L+ Y N G FE G D+ SW +M+S+ G+ EAV +
Sbjct: 519 LDT-VIQNELVDVYGKCRNMGYATRVFESIKGK---DVVSWTSMISSSALNGNESEAVEL 574
Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
F +VE G D L IL++ A++ A + + IH ++++ GF E +A AV+D YA
Sbjct: 575 FRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYAC 634
Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
CGD++ A+ FD+ ++ Y ++I AY HG A+E+FDKM+ N+ P +F++
Sbjct: 635 CGDLQSAKAVFDR-IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693
Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
++ ACSH GL+D+G K M+ +Y ++P P+ Y CLVDML R + +A +++M +
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
P+ V+ +LL+ CR H KE+GE A+++LL L PKN VL+S
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVS 797
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
+ D + + ++ S L + + G ++H +++K G+ +++ + N LI MYSKC + R
Sbjct: 383 KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGR 442
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
F M +++L+SWT +++ QN L+++ D+ +E +GS+++ + +
Sbjct: 443 AFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKS 502
Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
IHC L+ + + + +++ Y K ++ A RVF SI DV W +MI
Sbjct: 503 MLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS 561
Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
A G EA+ + M+ G++ D + L + ++ + GR+IH ++R
Sbjct: 562 SALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLE 621
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
SI A++DMY + A VF+R+ K ++ + ++ + + LF K
Sbjct: 622 GSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRH 681
Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLG 366
P+H++F LL C LD G
Sbjct: 682 ENVSPDHISFLALLYACSHAGLLDEG 707
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 7/268 (2%)
Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFS-SCGYICSSLIKSYVNFGQLDNSFE-FSN 507
F YV+E C + Q+H I KT S ++ L+ Y G LD++ + F
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
+R A W M+ A V G A+ ++ ++ G +L +CA + +
Sbjct: 142 MPDRTAFA-WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
+H ++KLG+++ ++ +A++ YAK D+ AR FD D +++N+++ +Y+
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
G E +E+F +M + P+ T VS ++AC G + S+ S
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASV--LKSSTHSS 318
Query: 688 DCYGC--LVDMLSRNGYLEDAKHVIEIM 713
+ Y C L+ M +R G + A+ ++ M
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQM 346
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 355 bits (911), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 225/758 (29%), Positives = 374/758 (49%), Gaps = 79/758 (10%)
Query: 46 FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
+LA L + + ++ G +HG IV++G +D +L N L+ +Y +CG + +VFDEM
Sbjct: 8 YLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEM 67
Query: 106 A-------------------------------ERNLVSWTLIVSAAIQNGEFDMGLKMYV 134
+ ER++VSW ++S ++ G + L +Y
Sbjct: 68 SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYK 127
Query: 135 DMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
M +GF+P+ F + SV+ C + FG H A+K ++KN FVG ++L+ YAK G
Sbjct: 128 RMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCG 187
Query: 195 -DVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
V RVF S+S + + A+IGG A EA+ + M +G+ +D N L
Sbjct: 188 FIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Query: 254 ------QGCSLVADF---DIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
+GC +++ ++G+QIH L +R + + N+L+++Y K+ M+ A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
M + +V+SWN + GF + ++ + SG +PN VT +L C
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------- 360
Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
R G VE +F ++ +++ WN +LSGY
Sbjct: 361 ----------------------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYS 392
Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
+ + F + ++ + T ++ +C R + QIHG +I+T S +
Sbjct: 393 NYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSH 452
Query: 485 ICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
I S LI Y +++ S F + LD+A W +M+S H + +A+ +F + +
Sbjct: 453 IVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQT 512
Query: 544 GEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
P+E T+L+SC+ + + + H V+K G+ ++ +V +A+ D Y KCG+I
Sbjct: 513 AVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
AR FD N VI +N +I Y H+G EA+ ++ KM + +P TFVSV++ACS
Sbjct: 573 ARQFFDAVLRKNTVI-WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
H GLV+ G + SM +G++P D Y C+VD L R G LEDA+ + E P++ S ++
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLW 691
Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
LLS CR+HG+ L +EKL+ L P++ AA+VLLS
Sbjct: 692 EILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLS 729
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 146/334 (43%), Gaps = 36/334 (10%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L+ D L+ LS L+ G Q+HG +++ + + + + LIA+YS+C
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 100 RVFDE-MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFM-PNEFAVGSVMKVCVS 157
+FD+ + E ++ W ++S N L ++ M + PNE + +V+ C
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
+ + G H +K + FV ++ + Y K G++ +A + F ++ + WN M
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEM 591
Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG-------RQIHG 270
I GY H G G EA+ + M+ G D TF++ L CS + G ++IHG
Sbjct: 592 IHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG 651
Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
I E++ I IV+ L G + E++A+ P +
Sbjct: 652 --IEPELDHYICIVDCL--------GRAGRLEDAEKLAE----------------ATPYK 685
Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
++S+ + +LS R H S+ R KL+ LD
Sbjct: 686 SSSVLWEILLSSCRV-HGDVSLARRVAEKLMRLD 718
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 349 bits (896), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 201/711 (28%), Positives = 366/711 (51%), Gaps = 4/711 (0%)
Query: 51 LSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
LS E+ SR+ G +H ++K G ++ L NNL+++Y K ++FDEM+ R +
Sbjct: 31 LSFCESNSSRI-GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTV 89
Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCF 170
+WT+++SA ++ EF L ++ +M +G PNEF SV++ C + +G +H
Sbjct: 90 FAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGS 149
Query: 171 ALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEA 230
+K E N VG S+ + Y+K G A +F S+ + D W MI EA
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 231 LNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDM 290
L S M+ G+ +++TF+ L G S + G+ IH II + ++ + +L+D
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
Y + S M+ A +V ++DV W ++ GF N + F + G +PN+ T+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM-AHSVFDNVS 409
S +L C + LD G Q+ + GF D +V ++L+ M+ +C A E+ A VF +
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMV 388
Query: 410 YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
N+ +W L+ G + D + + VE N T V+ C + + + V +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
IH +++ + +SL+ +Y + ++D ++ +R D ++ ++++ G
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 530 NHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASA 589
+ A+++ + + G + D+ L +++ A +GA + K +H + +K GF+ V ++
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNS 568
Query: 590 VIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQP 649
++D Y+KCG ++ A+ F++ + DV+ +N L+ A +G +S A+ F++M++ +P
Sbjct: 569 LVDMYSKCGSLEDAKKVFEE-IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 650 SQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV 709
TF+ ++SACS+ L D G F+ M Y ++P + Y LV +L R G LE+A V
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 710 IEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+E M +P+ ++++LL CR GN LGE + K L L P + A ++LL+
Sbjct: 688 VETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLA 738
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
+R D + L +S S NL + G +H + VK GF+ + N+L+ MYSKCG
Sbjct: 524 IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAK 583
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
+VF+E+A ++VSW +VS NG L + +M+ P+ ++ C +
Sbjct: 584 KVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGR 643
Query: 160 ASEFG 164
++ G
Sbjct: 644 LTDLG 648
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 346 bits (888), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 209/730 (28%), Positives = 370/730 (50%), Gaps = 8/730 (1%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER--NLVSWTLIVSAA 120
G QVH ++ + D + ++ MY+ CG F ++F + R ++ W I+S+
Sbjct: 54 GKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSF 113
Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
++NG + L Y M G P+ ++K CV++ + + + ++ N
Sbjct: 114 VRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE 173
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
FV S++ Y + G + ++F + D WN M+ GYA CG + S M +
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
I+ + TF L C+ D+G Q+HGL++ S V+ SI N+L+ MY K D A
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
K+F M+ D ++WN + G+ ++ ++ + F++ I SG P+ +TFS LL K
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
+L+ Q+ C + + +TS+LI + +C V MA ++F + ++ + ++
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
SGY N D L+ F + + + N T ++ ++ ++HG IIK GF
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
+ I ++I Y G+++ ++E + D+ SW +M++ + A+ IF +
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
+G D + L++CA + + K+IH F+IK ++VY S +ID YAKCG++
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMS 659
K A F ++ +++ +N++I A +HG + +++ +F +M + + ++P Q TF+ ++S
Sbjct: 594 KAAMNVF-KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIIS 652
Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
+C H G VD+G F+SM YG+QP + Y C+VD+ R G L +A ++ MPF P
Sbjct: 653 SCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDA 712
Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGNLLDHEGVCNV 779
V+ +LL CR+H N EL E AS KL+ L P N +VL+S N + E V V
Sbjct: 713 GVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLIS----NAHANAREWESVTKV 768
Query: 780 NDGIKTVDLK 789
+K +++
Sbjct: 769 RSLMKEREVQ 778
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 147/591 (24%), Positives = 281/591 (47%), Gaps = 15/591 (2%)
Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY--SISS 208
+++ C + G +H F + I + + +L YA G + ++FY +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 209 DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQI 268
+ WN++I + G +AL ML G++ D TF ++ C + +F +
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 269 HGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNP 328
+ ++C+ + ++LI Y++ +D K+F+R+ KD + WN + G+++
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
F + PN VTF +L C L +DLG+QL L + G E ++ +SL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
+ M+ +CG + A +F +S + TWN ++SGY + + L F + SGV +
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
TF ++ + + EN + QIH I++ S ++ S+LI +Y + + +
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
+D+ + AM+S +H G +++ +F LV+ P+E L +IL + A +
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
+ +H F+IK GF+ + AVID YAKCG + A F++ + D++ +N++I A
Sbjct: 461 RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER-LSKRDIVSWNSMITRCAQ 519
Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK-----GLVDKGCLLFKSMDSQYGM 683
S A++IF +M ++ + + + +SAC++ G G ++ S+ S
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
+ + L+DM ++ G L+ A +V + M + + + S+++ C HG
Sbjct: 580 EST------LIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGK 623
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 210/399 (52%), Gaps = 1/399 (0%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
LG Q+HG +V G + ++N+L++MYSKCG F ++F M+ + V+W ++S +
Sbjct: 257 LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYV 316
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
Q+G + L + +M ++G +P+ S++ E+ IHC+ ++ I + F
Sbjct: 317 QSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
+ ++++ Y K V+ A+ +F +S DV + AMI GY H G ++L + ++
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
I+ ++ T ++ L ++ +GR++HG II+ + +I A+IDMY K M+ A+
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
++FER++ +D++SWN++ +++ NP +F + +SG + V+ S L C L
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
G + + + S+LI M+ +CG ++ A +VF + KNI +WN +++
Sbjct: 557 SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIA 616
Query: 422 GYCFNCCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCC 459
+ D L F + E SG+ + TF ++ +CC
Sbjct: 617 ACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCC 655
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D + ++ +LS NL S G +HG ++K +D++ ++ LI MY+KCG + VF
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVF 600
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
M E+N+VSW I++A +G+ L ++ +M + +G P++ ++ C +G
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDV 660
Query: 162 EFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIG 219
+ G I+ V++ + + G + A S+ D G W ++G
Sbjct: 661 DEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLG 720
Query: 220 G 220
Sbjct: 721 A 721
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG-ARMAFDQS 610
L +L +C+ ++ K +H F+I + + Y ++ YA CG +M +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
+ + +N++I ++ +GL+++A+ + KM + P +TF ++ AC
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/666 (31%), Positives = 334/666 (50%), Gaps = 20/666 (3%)
Query: 113 WTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFAL 172
W ++ + +++ + YVDM G P+ +A +++K + E G IH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 173 KIRIEKNPF-VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
K + V +++N Y K GD A +VF IS + WN++I AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 232 NVVSSMLFEGITMDKYTFINALQGCS---LVADFDIGRQIHGLIIRSEVECSISIVNALI 288
ML E + +T ++ + CS + +G+Q+H +R + E + I+N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLV 243
Query: 289 DMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHV 348
MY K + + + +D+++WNT+ +N+ + + +L G P+
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 349 TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHSVFDN 407
T S +L C L L G +L AL G LDE + V S+L+ M+C C V VFD
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 408 VSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES-GVEVNGCTFFYVVETCCRSENQQM 466
+ + I WN +++GY N D + L F + ES G+ N T VV C RS
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVH 526
IHG ++K G ++ ++L+ Y G++D + E D+ +W M++ V
Sbjct: 424 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 483
Query: 527 QGHNHEAVTIFHSL------VEAGE-----KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
H+ +A+ + H + V G KP+ L TIL SCAA+ A + K IH +
Sbjct: 484 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 543
Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
IK T+V V SA++D YAKCG ++ +R FDQ N VI +N +IMAY HG EA
Sbjct: 544 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAYGMHGNGQEA 602
Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
+++ M + ++P++ TF+SV +ACSH G+VD+G +F M YG++PS D Y C+VD
Sbjct: 603 IDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVD 662
Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPT-VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDA 754
+L R G +++A ++ +MP + + SLL RIH N E+GE A++ L+ L P +
Sbjct: 663 LLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVAS 722
Query: 755 AHVLLS 760
+VLL+
Sbjct: 723 HYVLLA 728
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 160/655 (24%), Positives = 304/655 (46%), Gaps = 26/655 (3%)
Query: 56 NLKSRVLGTQVHGHIVKLGFTND-IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWT 114
+L+ LG Q+H H+ K G+ D + + N L+ +Y KCG FG +VFD ++ERN VSW
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 115 LIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE---FGYSIHCFA 171
++S+ +++M L+ + M P+ F + SV+ C ++ E G +H +
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 172 LKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL 231
L+ + E N F+ +++ Y KLG +A+++ + S D+ WN ++ EAL
Sbjct: 229 LR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEAL 287
Query: 232 NVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDM 290
+ M+ EG+ D++T + L CS + G+++H +++ S V +AL+DM
Sbjct: 288 EYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDM 347
Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVT 349
Y + +VF+ M D+ + WN + G+S+N++ + LF S G N T
Sbjct: 348 YCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTT 407
Query: 350 FSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVS 409
+ ++ C + + + G + V ++L+ M+ R G +++A +F +
Sbjct: 408 MAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467
Query: 410 YKNITTWNELLSGYCFNCCDADVL-----------KTFCNIWESGVEVNGCTFFYVVETC 458
+++ TWN +++GY F+ D L K ++ N T ++ +C
Sbjct: 468 DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSC 527
Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
+IH IK ++ + S+L+ Y G L S + + + ++ +W
Sbjct: 528 AALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWN 587
Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
++ A G+ EA+ + ++ G KP+E ++ +C+ G I +V+K
Sbjct: 588 VIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKP 646
Query: 579 GFNTEVYVA--SAVIDAYAKCGDIKGARMAFD-QSFNSNDVIVYNTLIMAYAHHGLVSEA 635
+ E + V+D + G IK A + + N +++L+ A H + E
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNL-EI 705
Query: 636 MEIFDKMKLANLQPSQAT-FVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
EI + L L+P+ A+ +V + + S GL DK + ++M Q G++ P C
Sbjct: 706 GEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQ-GVRKEPGC 758
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 17/425 (4%)
Query: 50 SLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERN 109
+L + E L ++G QVH + ++ G N F+ N L+AMY K G + R+
Sbjct: 211 NLPMPEGL---MMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 110 LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
LV+W ++S+ QN + L+ +M G P+EF + SV+ C + G +H
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 170 FALKI-RIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGF 228
+ALK +++N FVG ++++ Y V + RVF + +G WNAMI GY+ +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 229 EALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
EAL + M G+ + T + C F IHG +++ ++ + N L
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF------ILS 341
+DMY + +D A ++F +M D+D+++WNT+ G+ +++ L HK +
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 342 GS-----RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCG 396
G+ +PN +T +L C L L G ++ A+ + V S+L+ M+ +CG
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566
Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
++M+ VFD + KN+ TWN ++ Y + + + + GV+ N TF V
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 457 TCCRS 461
C S
Sbjct: 627 ACSHS 631
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 3/184 (1%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L+ + I L L L + G ++H + +K D+ + + L+ MY+KCG
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
+VFD++ ++N+++W +I+ A +G + + M G PNE SV C G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 160 ASEFGYSI-HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNA 216
+ G I + +E + V++ + G + A ++ + D G W++
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 217 MIGG 220
++G
Sbjct: 693 LLGA 696
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 335 bits (860), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 208/754 (27%), Positives = 374/754 (49%), Gaps = 60/754 (7%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV---- 117
LG Q H H++ GF F+ N L+ +Y+ F VFD+M R++VSW ++
Sbjct: 66 LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 125
Query: 118 ---------------------------SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGS 150
S +QNGE ++++VDM G +
Sbjct: 126 KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 185
Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
++KVC + + G IH +++ + + ++L+ YAK + RVF I +
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 211 VGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHG 270
W+A+I G AL M + + + + L+ C+ +++ +G Q+H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 305
Query: 271 LIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQ 330
++S+ + A +DMY K M A +F+ + + S+N + G+S+ ++ +
Sbjct: 306 HALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK 365
Query: 331 TASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIY 390
LFH+ + SG + ++ S + R C + L GLQ+ LA+ + V ++ I
Sbjct: 366 ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAID 425
Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
M+ +C A+ A VFD + ++ +WN +++ + N + L F ++ S +E + T
Sbjct: 426 MYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 451 FFYVVETCCRSENQQMVG---QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS----- 502
F +++ C +G +IH +I+K+G +S + SLI Y G ++ +
Sbjct: 486 FGSILKACTGGS----LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 503 --FEFSNGA---ERLDM----------ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
F+ +N + E L+ SW +++S V + + +A +F ++E G P
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
D++ T+L++CA + + K IH VIK ++VY+ S ++D Y+KCGD+ +R+ F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLV 667
++S D + +N +I YAHHG EA+++F++M L N++P+ TF+S++ AC+H GL+
Sbjct: 662 EKSLR-RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
DKG F M YG+ P Y +VD+L ++G ++ A +I MPF+ ++R+LL
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 728 GCRIHGNK-ELGEWASEKLLLLLPKNDAAHVLLS 760
C IH N E+ E A+ LL L P++ +A+ LLS
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLS 814
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/658 (27%), Positives = 309/658 (46%), Gaps = 31/658 (4%)
Query: 57 LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
L+ LG Q+HG +V++G D+ + L+ MY+K F LRVF + E+N VSW+ I
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
++ +QN + LK + +M+ ++ SV++ C ++ G +H ALK
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
+ V + L+ YAK ++ A+ +F + + + +NAMI GY+ +GF+AL +
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
++ G+ D+ + + C+LV G QI+GL I+S + + + NA IDMY K
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
+ AF+VF+ M +D +SWN + +N +T LF + S P+ TF +L+
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA---HSVF---DNVS- 409
C L G+++ + G +V SLI M+ +CG +E A HS F NVS
Sbjct: 493 CTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 410 -------------YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
+ +WN ++SGY D F + E G+ + T+ V++
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
TC + + QIH +IK S YICS+L+ Y G L +S + R D +
Sbjct: 612 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT 671
Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
W AM+ H G EA+ +F ++ KP+ +IL +CA +G K + F +
Sbjct: 672 WNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID--KGLEYFYM 729
Query: 577 ---KLGFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
G + ++ S ++D K G +K A + + F ++DVI L + H V
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789
Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
A E L L P ++ +++S + G+ +K L ++M + ++ P C
Sbjct: 790 EVAEEA--TAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG-FKLKKEPGC 844
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/650 (24%), Positives = 275/650 (42%), Gaps = 59/650 (9%)
Query: 151 VMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDD 210
V K C GA E G H + FV +L Y D +A VF + D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 211 VGCWNAMIGGYAHC-------------------------------GYGFEALNVVSSMLF 239
V WN MI GY+ G +++ V M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
EGI D TF L+ CS + D +G QIHG+++R + + +AL+DMY K
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
+ +VF+ + +K+ +SW+ + G +N F + + + ++ +LR C
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
L +L LG QL AL F + V ++ + M+ +C ++ A +FDN N ++N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
++GY L F + SG+ + + V C + QI+G IK+
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
S + ++ I Y L +F + R D SW A+++A G +E + +F S
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
++ + +PDE+ G+IL +C G+ IH ++K G + V ++ID Y+KCG
Sbjct: 474 MLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 600 IKGARMAFDQSFNSNDV-------------------IVYNTLIMAYAHHGLVSEAMEIFD 640
I+ A + F +V + +N++I Y +A +F
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQY-GMQPSPDCYGC--LVDML 697
+M + P + T+ +V+ C++ L G L K + +Q + D Y C LVDM
Sbjct: 593 RMMEMGITPDKFTYATVLDTCAN--LASAG--LGKQIHAQVIKKELQSDVYICSTLVDMY 648
Query: 698 SRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLL 747
S+ G L D++ + E + + +++ G HG E E+++L
Sbjct: 649 SKCGDLHDSRLMFE-KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMIL 697
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 166/390 (42%), Gaps = 36/390 (9%)
Query: 310 KDVISWNT-LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
+ V+S+N L S + P + S F F+ + + FS + ++C K L+LG Q
Sbjct: 12 RSVVSFNRCLTEKISYRRVP--SFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQ 69
Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE---------- 418
+ GF V + L+ ++ A VFD + +++ +WN+
Sbjct: 70 AHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSND 129
Query: 419 ---------------------LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVET 457
+LSGY N ++ F ++ G+E +G TF +++
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 458 CCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASW 517
C E+ + QIHG +++ G + S+L+ Y + S G + SW
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 518 GAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK 577
A+++ V A+ F + + + I ++L SCAA+ + +H +K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAME 637
F + V +A +D YAKC +++ A++ FD S N N YN +I Y+ +A+
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ-SYNAMITGYSQEEHGFKALL 368
Query: 638 IFDKMKLANLQPSQATFVSVMSACSH-KGL 666
+F ++ + L + + V AC+ KGL
Sbjct: 369 LFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D A L NL S LG Q+H ++K +D+++ + L+ MYSKCG +F
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
++ R+ V+W ++ +G+ + ++++ M PN S+++ C MG +
Sbjct: 662 EKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLID 721
Query: 163 FGYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSI--SSDDVGCWNAMI 218
G + + +K +P + ++++ K G V A + + +DDV W ++
Sbjct: 722 KGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV-IWRTLL 779
Query: 219 G 219
G
Sbjct: 780 G 780
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 330 bits (846), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 360/722 (49%), Gaps = 17/722 (2%)
Query: 45 IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
I +SLSL K L I+ G + +IF+ + LI+ Y+ G RVF
Sbjct: 32 ILCDQSLSLESLRKHNAL-------IITGGLSENIFVASKLISSYASYGKPNLSSRVFHL 84
Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
+ R++ W I+ A NG++ L + M +G P+ F V+ C + G
Sbjct: 85 VTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVG 144
Query: 165 YSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
+H LK ++N VG S + FY+K G + A VF + DV W A+I G+
Sbjct: 145 TFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQ 204
Query: 224 CGYGFEALNVVSSMLFEGITMDK---YTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
G L + M G +DK T Q CS + GR +HG +++ + S
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
+ +++ Y KS A+ F + D+D+ SW ++ + + + ++ +F +
Sbjct: 265 KFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN 324
Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVE 399
G P+ V S L+ + GK++ + G + HC LD V +SL+ M+C+ +
Sbjct: 325 KGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDS-TVCNSLLSMYCKFELLS 383
Query: 400 MAHSVFDNVSYK-NITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
+A +F +S + N WN +L GY C ++ F I G+E++ + V+ +C
Sbjct: 384 VAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSC 443
Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
+ +H ++KT + +SLI Y G L ++ A+ ++ +W
Sbjct: 444 SHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWN 502
Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
AM+++ VH + +A+ +F +V KP L T+L +C G+ +R + IH ++ +
Sbjct: 503 AMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET 562
Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
+ +++A+ID YAKCG ++ +R FD N D + +N +I Y HG V A+ +
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAG-NQKDAVCWNVMISGYGMHGDVESAIAL 621
Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
FD+M+ ++++P+ TF++++SAC+H GLV++G LF M QY ++P+ Y CLVD+LS
Sbjct: 622 FDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPNLKHYSCLVDLLS 680
Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
R+G LE+A+ + MPF P ++ +LLS C HG E+G +E+ + P+ND +++
Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIM 740
Query: 759 LS 760
L+
Sbjct: 741 LA 742
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/527 (22%), Positives = 240/527 (45%), Gaps = 36/527 (6%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
+ +P L NL + G +HG VK G + F+Q+++ + YSK G
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
F E+ + ++ SWT I+++ ++G+ + M+ +M+ G P+ + ++ M
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIG 219
G + H F ++ + V S+L+ Y K ++ AE++F IS + + WN M+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
GY + + + + GI +D + + + CS + +G+ +H ++++ ++
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
+IS+VN+LID+Y K + A+++F AD +VI+WN + + + + +LF + +
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
+P+ +T LL C L+ G + +++++LI M+ +CG +E
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLE 585
Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
+ +FD + K+ WN ++SGY + + F + ES V+ G TF ++ C
Sbjct: 586 KSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSAC- 644
Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
H +++ G K ++ Q D + ++ +
Sbjct: 645 ----------THAGLVEQG-----------KKLFLKMHQYD---------VKPNLKHYSC 674
Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
++ L G+ EA + S+ + PD I GT+L+SC G ++
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFS---PDGVIWGTLLSSCMTHGEFE 718
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 328 bits (842), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 182/662 (27%), Positives = 345/662 (52%), Gaps = 7/662 (1%)
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
+FD+ R+ S+ ++ ++G ++++++ G + SV+KV ++
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
FG +HC +K + VG S+++ Y K + +VF + +V W +I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
YA E L + M EG + +TF AL + G Q+H +++++ ++ +
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT 228
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
I + N+LI++Y+K + A +F++ K V++WN++ G++ N + +F+ L
Sbjct: 229 IPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
+ R + +F+ +++ C L +L QL C + GFL ++N+ ++L+ + +C A+
Sbjct: 289 NYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD 348
Query: 401 AHSVFDNVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
A +F + N+ +W ++SG+ N + + F + GV N T+ ++
Sbjct: 349 ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP 408
Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
++H ++KT + + ++L+ +YV G+++ + + +G + D+ +W A
Sbjct: 409 VISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSA 464
Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ-RTKSIHPFVIKL 578
M++ G A+ +F L + G KP+E+ +ILN CAA A + K H F IK
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
++ + V+SA++ YAK G+I+ A F + D++ +N++I YA HG +A+++
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKALDV 583
Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLS 698
F +MK ++ TF+ V +AC+H GLV++G F M + P+ + C+VD+ S
Sbjct: 584 FKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYS 643
Query: 699 RNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVL 758
R G LE A VIE MP T++R++L+ CR+H ELG A+EK++ + P++ AA+VL
Sbjct: 644 RAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVL 703
Query: 759 LS 760
LS
Sbjct: 704 LS 705
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/610 (25%), Positives = 275/610 (45%), Gaps = 21/610 (3%)
Query: 25 IHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNN 84
IHRL G CS + L +S L + G Q+H +K GF +D+ + +
Sbjct: 84 IHRL-GMEMDCS---------IFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTS 133
Query: 85 LIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN 144
L+ Y K F G +VFDEM ERN+V+WT ++S +N D L +++ M+ G PN
Sbjct: 134 LVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPN 193
Query: 145 EFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFY 204
F + + V G G +H +K ++K V S++N Y K G+V A +F
Sbjct: 194 SFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD 253
Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
V WN+MI GYA G EAL + SM + + + +F + ++ C+ + +
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFS 323
Q+H +++ +I AL+ Y K + M A ++F+ + +V+SW + GF
Sbjct: 314 TEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFL 373
Query: 324 ENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN 383
+N + LF + G RPN T+S++L + ++ Q+ + +
Sbjct: 374 QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV----VKTNYERSST 429
Query: 384 VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG 443
V ++L+ + + G VE A VF + K+I W+ +L+GY +K F + + G
Sbjct: 430 VGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG 489
Query: 444 VEVNGCTFFYVVETCCRSENQQMVG-QIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS 502
++ N TF ++ C + G Q HG IK+ S + S+L+ Y G ++++
Sbjct: 490 IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESA 549
Query: 503 FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
E D+ SW +M+S G +A+ +F + + K D + +C
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 563 GAYQRTKSIHPFVI---KLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
G + + ++ K+ E S ++D Y++ G ++ A + N ++
Sbjct: 610 GLVEEGEKYFDIMVRDCKIAPTKE--HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667
Query: 620 NTLIMAYAHH 629
T++ A H
Sbjct: 668 RTILAACRVH 677
Score = 202 bits (513), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/575 (24%), Positives = 268/575 (46%), Gaps = 16/575 (2%)
Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAA-----AERVFYSISSDDVGCWNAMIGG 220
S+ F K RI N G + + Y G V++ A +F D + +++ G
Sbjct: 12 SLENFKPKFRIYAN---GVAQVRIYC-FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFG 67
Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
++ G EA + ++ G+ MD F + L+ + + D GRQ+H I+
Sbjct: 68 FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDD 127
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
+S+ +L+D Y+K S KVF+ M +++V++W TL G++ N + +LF +
Sbjct: 128 VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN 187
Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
G++PN TF+ L + GLQ+ + + G V++SLI ++ +CG V
Sbjct: 188 EGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRK 247
Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
A +FD K++ TWN ++SGY N D + L F ++ + V ++ +F V++ C
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGA 519
+ + Q+H +++K GF I ++L+ +Y LD F ++ SW A
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTA 367
Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
M+S + EAV +F + G +P+E+ IL + I + +H V+K
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTN 423
Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIF 639
+ V +A++DAY K G ++ A F + D++ ++ ++ YA G A+++F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVF-SGIDDKDIVAWSAMLAGYAQTGETEAAIKMF 482
Query: 640 DKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSR 699
++ ++P++ TF S+++ C+ F + + S L+ M ++
Sbjct: 483 GELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAK 542
Query: 700 NGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
G +E A+ V + + + S++SG HG
Sbjct: 543 KGNIESAEEVFK-RQREKDLVSWNSMISGYAQHGQ 576
>sp|Q0WN01|PP286_ARATH Pentatricopeptide repeat-containing protein At3g58590
OS=Arabidopsis thaliana GN=At3g58590 PE=2 SV=2
Length = 741
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/685 (28%), Positives = 339/685 (49%), Gaps = 43/685 (6%)
Query: 79 IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
+++ NN+I++Y K G +VFD+M ERN VS+ I+ + G+ D ++ +M+
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 139 NGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI-EKNPFVGCSVLNFYAKLGDVA 197
G++PN+ V ++ C S+ G +H +LK + + FVG +L Y +L +
Sbjct: 109 FGYLPNQSTVSGLLS-CASLDVRA-GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
AE+VF + + WN M+ H G+ E + ++ G ++ + +F+ L+G S
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVS 226
Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
V D DI +Q+H + ++C IS+VN+LI Y K A ++F+ D++SWN
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
+ ++++NP + LF G PN T+ +L + L G Q+ + + G
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG 346
Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
+ ++LI + +CG +E + FD + KNI WN LLSGY N L F
Sbjct: 347 CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFL 405
Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVN-- 495
+ + G TF +++CC +E QQ+ H I++ G+ Y+ SSL++SY
Sbjct: 406 QMLQMGFRPTEYTFSTALKSCCVTELQQL----HSVIVRMGYEDNDYVLSSLMRSYAKNQ 461
Query: 496 ------------------------------FGQLDNSFEFSNGAERLDMASWGAMMSALV 525
GQ S + + E+ D SW ++A
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACS 521
Query: 526 HQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEV 584
++ E + +F ++++ +PD+Y +IL+ C+ + SIH + K F+ +
Sbjct: 522 RSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581
Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
+V + +ID Y KCG I+ F+++ N +I + LI HG EA+E F +
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKN-LITWTALISCLGIHGYGQEALEKFKETLS 640
Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
+P + +F+S+++AC H G+V +G LF+ M YG++P D Y C VD+L+RNGYL+
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLK 699
Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGC 729
+A+H+I MPF V+R+ L GC
Sbjct: 700 EAEHLIREMPFPADAPVWRTFLDGC 724
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/595 (24%), Positives = 262/595 (44%), Gaps = 39/595 (6%)
Query: 63 GTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
GTQ+HG +K G F D F+ L+ +Y + +VF++M ++L +W ++S
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
G + + ++ G E + V+K + + +HC A K ++
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
V S+++ Y K G+ AER+F S D+ WNA+I A +AL + SM G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+ ++ T+++ L SLV GRQIHG++I++ E I + NALID Y K ++ +
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSR 371
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
F+ + DK+++ WN L G++ NK+ SLF + + G RP TFS L+ C +
Sbjct: 372 LCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC-VT 429
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIY------------------------------- 390
+L QL + + G+ D + V SSL+
Sbjct: 430 ELQ---QLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVA 486
Query: 391 -MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGC 449
++ R G + + + + +WN ++ + +V++ F ++ +S + +
Sbjct: 487 GIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKY 546
Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNG 508
TF ++ C + + + IHG I KT FS ++C+ LI Y G + + +
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEE 606
Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
++ +W A++S L G+ EA+ F + G KPD +IL +C G +
Sbjct: 607 TREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
+ + G E+ +D A+ G +K A + D V+ T +
Sbjct: 667 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 197/450 (43%), Gaps = 49/450 (10%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
+ Q+H K G +I + N+LI+ Y KCG R+F + ++VSW I+ A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
++ LK++V M +GF PN+ SV+ V + G IH +K E
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
+G ++++FYAK G++ + F I ++ CWNA++ GYA+ G L++ ML G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMG 411
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+YTF AL+ C + +Q+H +I+R E + ++++L+ Y K+ M+ A
Sbjct: 412 FRPTEYTFSTALKSCCVTE----LQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 302 --------------------------------KVFERMADKDVISWNTLFGGFSENKNPG 329
K+ + D +SWN S +
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 330 QTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSL 388
+ LF + S RP+ TF +L C KL DL LG + L F + V + L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
I M+ +CG++ VF+ KN+ TW L+S + + L+ F G + +
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
+F ++ T CR HG ++K G
Sbjct: 648 VSFISIL-TACR----------HGGMVKEG 666
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 205/416 (49%), Gaps = 9/416 (2%)
Query: 250 INALQGCSLVADFDIGRQIHGLIIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
++ L C F + +H L I S + + + N +I +Y K + A KVF++M
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
+++ +S+NT+ G+S+ + + +F + G PN T S LL C L D+ G
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGT 133
Query: 368 QLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
QL L+L G F+ + V + L+ ++ R +EMA VF+++ +K++ TWN ++S
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 427 CCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
+ + F + G + +F V++ ++ + Q+H + K G +
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
+SLI +Y G + A D+ SW A++ A + +A+ +F S+ E G
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
P++ ++L + + + IH +IK G T + + +A+ID YAKCG+++ +R+
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 607 FDQSFNSNDVIVYNTLIMAYAHH-GLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
FD + N ++ +N L+ YA+ G + + +F +M +P++ TF + + +C
Sbjct: 374 FDYIRDKN-IVCWNALLSGYANKDGPI--CLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Query: 38 SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFG 96
S +R D LSL L LG+ +HG I K F+ D F+ N LI MY KCG
Sbjct: 539 SNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIR 598
Query: 97 WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
++VF+E E+NL++WT ++S +G L+ + + + GF P+ + S++ C
Sbjct: 599 SVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACR 658
Query: 157 SMGASEFGYSI 167
G + G +
Sbjct: 659 HGGMVKEGMGL 669
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 320 bits (821), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 209/757 (27%), Positives = 364/757 (48%), Gaps = 16/757 (2%)
Query: 12 DKPSCHFHATRKRIHRLCGNNQ--FCSDSFL--RKDPIFLAKSLSLSENLKSRVLGTQVH 67
D SC+ + + HRL + F FL + I +S L++ + V
Sbjct: 114 DVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVC 173
Query: 68 GHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFD 127
H +K+G+ +++ LI ++SK F +VF + N+ W I++ A++N +
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
++ +M P+ + SV+ C S+ FG + +K E + FV +++
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIV 292
Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKY 247
+ YAK G +A A VF I + V W M+ GY F AL + M G+ ++
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
T + + C + Q+H + +S S+ ALI MY KS +D + +VFE +
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
Query: 308 AD---KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD-L 363
D ++++ N + FS++K PG+ LF + + G R + + LL +LD L
Sbjct: 413 DDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL----SVLDCL 466
Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
+LG Q+ L G + + V SSL ++ +CG++E ++ +F + +K+ W ++SG+
Sbjct: 467 NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
+ + F + + G + T V+ C + +IHG ++ G
Sbjct: 527 NEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGM 586
Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
+ S+L+ Y G L + + + LD S +++S G + +F +V +
Sbjct: 587 DLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS 646
Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
G D + + +IL + A +H ++ K+G TE V S+++ Y+K G I
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDC 706
Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
AF Q N D+I + LI +YA HG +EA+++++ MK +P + TFV V+SACSH
Sbjct: 707 CKAFSQ-INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSH 765
Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
GLV++ SM YG++P Y C+VD L R+G L +A+ I M +P V+
Sbjct: 766 GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWG 825
Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+LL+ C+IHG ELG+ A++K + L P + A++ LS
Sbjct: 826 TLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLS 862
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/637 (24%), Positives = 304/637 (47%), Gaps = 23/637 (3%)
Query: 78 DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
D+FL +L++ YS G ++FD + + ++VS +++S Q+ F+ L+ + M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
GF NE + GSV+ C ++ A F + C +K+ V ++++ ++K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 198 AAERVFYSISSDDVGCWNAMI-GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
A +VF S +V CWN +I G + YG ++ M D YT+ + L C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYG-AVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
+ + G+ + +I+ E + + A++D+Y K M A +VF R+ + V+SW
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWT 320
Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
+ G++++ + +F + SG N+ T + ++ CG+ + Q+
Sbjct: 321 VMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKS 380
Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVF---DNVSYKNITTWNELLSGYCFNCCDADVL 433
GF + +V ++LI M+ + G ++++ VF D++ +NI N +++ + + +
Sbjct: 381 GFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 434 KTFCNIWESGV---EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
+ F + + G+ E + C+ V++ + Q+HG +K+G + SSL
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCL------NLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 491 KSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEY 550
Y G L+ S++ G D A W +M+S G+ EA+ +F +++ G PDE
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDES 552
Query: 551 ILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
L +L C++ + R K IH + ++ G + + + SA+++ Y+KCG +K AR +D+
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDR- 611
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
D + ++LI Y+ HGL+ + +F M ++ S++ A + L D+
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA---LSDES 668
Query: 671 CL--LFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLED 705
L + ++ G+ P L+ M S+ G ++D
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDD 705
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 157/660 (23%), Positives = 317/660 (48%), Gaps = 26/660 (3%)
Query: 39 FLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG 98
F + D + L+ +L+ G V ++K G D+F+ ++ +Y+KCG+
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 99 LRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
+ VF + ++VSWT+++S ++ + L+++ +M+ +G N V SV+ C
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDV---GCWN 215
+H + K + V ++++ Y+K GD+ +E+VF + DD+ N
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVN 422
Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD---IGRQIHGLI 272
MI ++ +A+ + + ML EG+ D+++ CSL++ D +G+Q+HG
Sbjct: 423 VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSV------CSLLSVLDCLNLGKQVHGYT 476
Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
++S + +++ ++L +Y K ++ ++K+F+ + KD W ++ GF+E +
Sbjct: 477 LKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAI 536
Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
LF + + G+ P+ T + +L C L G ++ L G ++ S+L+ M+
Sbjct: 537 GLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMY 596
Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
+CG++++A V+D + + + + L+SGY + D F ++ SG ++
Sbjct: 597 SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAIS 656
Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN---SFEFSNGA 509
+++ S+ + Q+H I K G + + SSL+ Y FG +D+ +F NG
Sbjct: 657 SILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
D+ +W A++++ G +EA+ +++ + E G KPD+ +L++C+ G + +
Sbjct: 717 ---DLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESY 773
Query: 570 -SIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
++ V G E ++DA + G ++ A + D +V+ TL+ A
Sbjct: 774 FHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKI 833
Query: 629 HGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
HG V E ++ K K L+PS A ++S+ + + G D+ K M G+Q P
Sbjct: 834 HGEV-ELGKVAAK-KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGT-GVQKEP 890
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 203/469 (43%), Gaps = 11/469 (2%)
Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
Q H L+ R + + + +L+ Y S M A K+F+ + DV+S N + G+ +++
Sbjct: 71 QAH-LLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 327 NPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTS 386
++ F K G N +++ ++ C L + C + G+ E V S
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVES 189
Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
+LI +F + E A+ VF + N+ WN +++G N V F + +
Sbjct: 190 ALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKP 249
Query: 447 NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFS 506
+ T+ V+ C E + + +IK G ++C++++ Y G + + E
Sbjct: 250 DSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVF 308
Query: 507 NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ 566
+ + SW M+S A+ IF + +G + + + +++++C
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 567 RTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAY 626
+H +V K GF + VA+A+I Y+K GDI + F+ + + N +I ++
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSF 428
Query: 627 AHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA--CSHKGLVDKGCLLFKSMDSQYGMQ 684
+ +A+ +F +M L+ + + S++S C + G G L + G+
Sbjct: 429 SQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTL------KSGLV 482
Query: 685 PSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHG 733
L + S+ G LE++ + + +PF+ + + S++SG +G
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 319 bits (818), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/716 (27%), Positives = 365/716 (50%), Gaps = 6/716 (0%)
Query: 46 FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
F++++LS S NL ++H ++ LG + F LI YS L VF +
Sbjct: 9 FISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 106 AE-RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
+ +N+ W I+ A +NG F L+ Y ++ + P+++ SV+K C + +E G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
++ L + E + FVG ++++ Y+++G + A +VF + D+ WN++I GY+
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
GY EAL + + I D +T + L + G+ +HG ++S V + +
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
N L+ MY+K A +VF+ M +D +S+NT+ G+ + + ++ +F + L +
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFK 304
Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
P+ +T S +LR CG L DL L + L GF+ E V + LI ++ +CG + A V
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDV 364
Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
F+++ K+ +WN ++SGY + + +K F + + + T+ ++ R +
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
+ +H IK+G + ++LI Y G++ +S + + D +W ++SA
Sbjct: 425 KFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISAC 484
Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
V G + + + ++ PD L CA++ A + K IH +++ G+ +E+
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
+ +A+I+ Y+KCG ++ + F++ + DV+ + +I AY +G +A+E F M+
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFER-MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEK 603
Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
+ + P F++++ ACSH GLVD+G F+ M + Y + P + Y C+VD+LSR+ +
Sbjct: 604 SGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKIS 663
Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
A+ I+ MP +P +++ S+L CR G+ E E S +++ L P + +L S
Sbjct: 664 KAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS 719
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/553 (24%), Positives = 242/553 (43%), Gaps = 34/553 (6%)
Query: 37 DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFG 96
+S++ D ++ L NL G +HG +K G + + + N L+AMY K
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 97 WGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCV 156
RVFDEM R+ VS+ ++ ++ + ++M+++ + F P+ V SV++ C
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACG 318
Query: 157 SMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNA 216
+ I+ + LK V +++ YAK GD+ A VF S+ D WN+
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNS 378
Query: 217 MIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE 276
+I GY G EA+ + M+ D T++ + + +AD G+ +H I+S
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 277 VECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGG---FSENKNPGQTAS 333
+ +S+ NALIDMY K + + K+F M D ++WNT+ F + Q +
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFC 393
K S P+ TF + L C L LG ++ C L G+ E + ++LI M+
Sbjct: 499 QMRK---SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 394 RCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFY 453
+CG +E + VF+ +S +++ TW ++ Y L+TF ++ +SG+ + F
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615
Query: 454 VVETCCRSENQQMVGQIHGAIIKTGFS-----SCGYICSSLIKSYV-NFGQLDNSFEFSN 507
++ C H ++ G + Y +I+ Y L S + S
Sbjct: 616 IIYACS-----------HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 508 GAE-------RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG-EKPDEYILGTILNSC 559
E + D + W +++ A G A + ++E + P IL + N+
Sbjct: 665 AEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILAS--NAY 722
Query: 560 AAIGAYQRTKSIH 572
AA+ + + I
Sbjct: 723 AALRKWDKVSLIR 735
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 316 bits (810), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 206/780 (26%), Positives = 373/780 (47%), Gaps = 58/780 (7%)
Query: 5 KRAFLFADKPSCHFHATRK----------RIHRLCGNNQFCSDSFLRKDPIFLAKSLSLS 54
K F + KPS H + R+ LC N + L + F ++L +
Sbjct: 12 KVPFSVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDF--RNLRIG 69
Query: 55 ENLKSRVL-----------GTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRV 101
+ +L G Q+H I+K G + + +++ L+ Y+KC +
Sbjct: 70 PEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVL 129
Query: 102 FDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
F ++ RN+ SW I+ + G + L +V+M N P+ F V +V K C ++ S
Sbjct: 130 FSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWS 189
Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
FG +H + +K +E FV S+ + Y K G + A +VF I + WNA++ GY
Sbjct: 190 RFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGY 249
Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
G EA+ + S M +G+ + T L + + + G+Q H + I + +E
Sbjct: 250 VQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDN 309
Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
+ +L++ Y K ++YA VF+RM +KDV++WN + G+ + + L
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
+ + VT + L+ + +L LG ++QC + F + + S+++ M+ +CG++ A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
VFD+ K++ WN LL+ Y + + L+ F + GV N T+ ++ + R+
Sbjct: 430 KKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRN 489
Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
GQ+ A F Q+ +S N + SW MM
Sbjct: 490 ------GQVDEA-------------------KDMFLQMQSSGIIPN------LISWTTMM 518
Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGF 580
+ +V G + EA+ + E+G +P+ + + L++CA + + ++IH ++I+ L
Sbjct: 519 NGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD 640
++ V + ++++D YAKCGDI A F S ++ + N +I AYA +G + EA+ ++
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS-ELPLSNAMISAYALYGNLKEAIALYR 637
Query: 641 KMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRN 700
++ L+P T +V+SAC+H G +++ +F + S+ M+P + YG +VD+L+
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASA 697
Query: 701 GYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
G E A +IE MPF+P + +SL++ C EL ++ S KLL P+N +V +S
Sbjct: 698 GETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTIS 757
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 329/647 (50%), Gaps = 28/647 (4%)
Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
A +N F + L+ Y+ S++ C S + G IH L + +
Sbjct: 57 AQKNSSFKIRLRTYI---------------SLICACSSSRSLAQGRKIHDHILNSNCKYD 101
Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
+ +L+ Y K G + A VF + ++ + ++I GY+ G G EA+ + ML
Sbjct: 102 TILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
E + D++ F + ++ C+ +D +G+Q+H +I+ E + NALI MY++ + M
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCG 358
A +VF + KD+ISW+++ GFS+ + S + + G PN F L+ C
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
LL D G Q+ L + SL M+ RCG + A VFD + + +WN
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTF--FYVVETCCRSENQQMVGQIHGAIIK 476
+++G N + + F + SG + + +T + +Q M QIH IIK
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM--QIHSYIIK 399
Query: 477 TGFSSCGYICSSLIKSYVNFGQLD---NSFE-FSNGAERLDMASWGAMMSALVHQGHNHE 532
GF + +C+SL+ Y L N FE F N A D SW +++A + E
Sbjct: 400 WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA---DSVSWNTILTACLQHEQPVE 456
Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
+ +F ++ + +PD +G +L C I + + +H + +K G E ++ + +ID
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
YAKCG + AR FD S ++ DV+ ++TLI+ YA G EA+ +F +MK A ++P+
Sbjct: 517 MYAKCGSLGQARRIFD-SMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
TFV V++ACSH GLV++G L+ +M +++G+ P+ + C+VD+L+R G L +A+ I+
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
M +P V+++LLS C+ GN L + A+E +L + P N AHVLL
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLL 682
Score = 256 bits (653), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 166/624 (26%), Positives = 302/624 (48%), Gaps = 6/624 (0%)
Query: 58 KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
+S G ++H HI+ D L N++++MY KCG VFD M ERNLVS+T ++
Sbjct: 81 RSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVI 140
Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
+ QNG+ +++Y+ M +P++FA GS++K C S G +H +K+
Sbjct: 141 TGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESS 200
Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSM 237
+ +++ Y + ++ A RVFY I D+ W+++I G++ G+ FEAL+ + M
Sbjct: 201 SHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEM 260
Query: 238 LFEGI-TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSG 296
L G+ ++Y F ++L+ CS + D G QIHGL I+SE+ + +L DMY +
Sbjct: 261 LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGF 320
Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQ 356
++ A +VF+++ D SWN + G + N + S+F + SG P+ ++ LL
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCA 380
Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNV-SYKNITT 415
K + L G+Q+ + GFL + V +SL+ M+ C + ++F++ + + +
Sbjct: 381 QTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVS 440
Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAII 475
WN +L+ + ++L+ F + S E + T ++ C + ++ Q+H +
Sbjct: 441 WNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSL 500
Query: 476 KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVT 535
KTG + +I + LI Y G L + + + D+ SW ++ G EA+
Sbjct: 501 KTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALI 560
Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV-IKLGFNTEVYVASAVIDAY 594
+F + AG +P+ +L +C+ +G + ++ + + G + S V+D
Sbjct: 561 LFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 595 AKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK-MKLANLQPSQAT 653
A+ G + A D+ DV+V+ TL+ A G V A + + +K+ +
Sbjct: 621 ARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 654 FVSVMSACSHKGLVDKGCLLFKSM 677
+ M A S G + LL SM
Sbjct: 681 LLCSMHASS--GNWENAALLRSSM 702
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 57 LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
+ S LG+QVH + +K G + F++N LI MY+KCG G R+FD M R++VSW+ +
Sbjct: 486 ISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTL 545
Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
+ Q+G + L ++ +MK+ G PN V+ C +G E G ++ ++
Sbjct: 546 IVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYA-TMQTEH 604
Query: 177 EKNPFVG-CS-VLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGG 220
+P CS V++ A+ G + AER + DV W ++
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSA 651
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 313 bits (802), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 195/747 (26%), Positives = 364/747 (48%), Gaps = 11/747 (1%)
Query: 23 KRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIV-KLGFTNDIFL 81
+ + G+++ SD+FL L L S K +G ++H + ND L
Sbjct: 64 RTVQEFVGDDESSSDAFLLVREA-LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVL 122
Query: 82 QNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNG 140
+I MY+ CG VFD + +NL W ++S+ +N +D L+ +++M T
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182
Query: 141 FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAE 200
+P+ F V+K C M G ++H +K + ++ FVG ++++FY G V A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 201 RVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE----GITMDKYTFINALQGC 256
++F + ++ WN+MI ++ G+ E+ ++ M+ E D T + L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
+ + +G+ +HG ++ ++ + + NAL+DMY K + A +F+ +K+V+SWN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 317 TLFGGFSENKNPGQTASLFHKFILSGS--RPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
T+ GGFS + T + + + G + + VT + C L +L C +L
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
F+ E V ++ + + +CG++ A VF + K + +WN L+ G+ + L
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
+ SG+ + T ++ C + ++ ++ ++HG II+ ++ S++ Y+
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 542
Query: 495 NFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGT 554
+ G+L + E + SW +++ + G A+ +F +V G + +
Sbjct: 543 HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 602
Query: 555 ILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
+ +C+ + + + + H + +K + ++A ++ID YAK G I + F+
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN-GLKEK 661
Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
+N +IM Y HGL EA+++F++M+ P TF+ V++AC+H GL+ +G
Sbjct: 662 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI-EIMPFQPSPTVYRSLLSGCRIHG 733
M S +G++P+ Y C++DML R G L+ A V+ E M + +++SLLS CRIH
Sbjct: 722 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 781
Query: 734 NKELGEWASEKLLLLLPKNDAAHVLLS 760
N E+GE + KL L P+ +VLLS
Sbjct: 782 NLEMGEKVAAKLFELEPEKPENYVLLS 808
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/572 (25%), Positives = 247/572 (43%), Gaps = 34/572 (5%)
Query: 27 RLCGNNQFCSDSFL--------------RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK 72
R+ +N F +SFL D L L + + LG VHG VK
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 73 LGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKM 132
L ++ L N L+ MYSKCG +F +N+VSW +V G+ +
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 133 YVDMKTNG--FMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFY 190
M G +E + + + VC +HC++LK N V + + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFI 250
AK G ++ A+RVF+ I S V WNA+IGG+A +L+ M G+ D +T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 251 NALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADK 310
+ L CS + +G+++HG IIR+ +E + + +++ +YI + +F+ M DK
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 311 DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQ 370
++SWNT+ G+ +N P + +F + +L G + ++ + C L L LG +
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 371 CLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
AL D+ + SLI M+ + G++ + VF+ + K+ +WN ++ GY +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLI 490
+ +K F + +G + TF V+ C S G IH + + +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHS------GLIHEGLRYLDQMKSSFGLKPNL 734
Query: 491 KSYV-------NFGQLDNSFEF--SNGAERLDMASWGAMMSA-LVHQGHNHEAVTIFHSL 540
K Y GQLD + +E D+ W +++S+ +HQ
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
EKP+ Y+L + N A +G ++ + +
Sbjct: 795 ELEPEKPENYVL--LSNLYAGLGKWEDVRKVR 824
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/597 (29%), Positives = 303/597 (50%), Gaps = 4/597 (0%)
Query: 168 HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYG 227
HC+A+K + +V +L+ Y K G + A +F + D WN MI GY CG
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 228 FEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNAL 287
+A + + M G +D Y+F L+G + V FD+G Q+HGL+I+ EC++ + ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 288 IDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNH 347
+DMY K ++ AF+ F+ +++ + +SWN L GF + ++ L + +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 348 V-TFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFD 406
TF+ LL + +L Q+ L G E + +++I + CG+V A VFD
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 407 NVS-YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
+ K++ +WN +++G+ + + F + VE + T+ ++ C E+Q
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNF--GQLDNSFEFSNGAERLDMASWGAMMSA 523
+HG +IK G ++LI Y+ F G ++++ + D+ SW ++++
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
+G + +AV F L + K D+Y +L SC+ + Q + IH K GF +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN 442
Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
+V S++I Y+KCG I+ AR F Q + + + +N +I+ YA HGL ++++F +M
Sbjct: 443 EFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMC 502
Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
N++ TF ++++ACSH GL+ +G L M+ Y +QP + Y VD+L R G +
Sbjct: 503 NQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLV 562
Query: 704 EDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
AK +IE MP P P V ++ L CR G E+ + LL + P++ +V LS
Sbjct: 563 NKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLS 619
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/601 (24%), Positives = 268/601 (44%), Gaps = 36/601 (5%)
Query: 66 VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
H + +K G +DI++ N ++ Y K G+ G+ +FDEM +R+ VSW ++S G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
+ ++ MK +G + ++ ++K S+ + G +H +K E N +VG S
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-GITM 244
+++ YAK V A F IS + WNA+I G+ A ++ M + +TM
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
D TF L ++ +Q+H +++ ++ I+I NA+I Y + A +VF
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 305 ERM-ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
+ + KD+ISWN++ GFS+++ LF + + T++ LL C
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQ 321
Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCR--CGAVEMAHSVFDNVSYKNITTWNELLS 421
G L + + G + T++LI M+ + G +E A S+F+++ K++ +WN +++
Sbjct: 322 IFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIIT 381
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
G+ D +K F + S ++V+ F ++ +C Q+ QIH K+GF S
Sbjct: 382 GFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441
Query: 482 CGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
++ SSLI Y G ++++ + F + + +W AM+ G ++ +F +
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM 501
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
K D IL +C+ G Q + L VY ++ YA D+
Sbjct: 502 CNQNVKLDHVTFTAILTACSHTGLIQEGLEL------LNLMEPVYKIQPRMEHYAAAVDL 555
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
G GLV++A E+ + M L TF+ V A
Sbjct: 556 LG-------------------------RAGLVNKAKELIESMPLNPDPMVLKTFLGVCRA 590
Query: 661 C 661
C
Sbjct: 591 C 591
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 5/266 (1%)
Query: 60 RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSK--CGYFGWGLRVFDEMAERNLVSWTLIV 117
++ G +HG ++K G N LI+MY + G L +F+ + ++L+SW I+
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSII 380
Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIE 177
+ Q G + +K + ++++ +++A ++++ C + + G IH A K
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFV 440
Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSD-DVGCWNAMIGGYAHCGYGFEALNVVSS 236
N FV S++ Y+K G + +A + F ISS WNAMI GYA G G +L++ S
Sbjct: 441 SNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQ 500
Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSS 295
M + + +D TF L CS G ++ L+ +++ + A +D+ ++
Sbjct: 501 MCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAG 560
Query: 296 GMDYAFKVFERMA-DKDVISWNTLFG 320
++ A ++ E M + D + T G
Sbjct: 561 LVNKAKELIESMPLNPDPMVLKTFLG 586
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 96/225 (42%), Gaps = 12/225 (5%)
Query: 34 FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
+ S ++ D + L +L + LG Q+H K GF ++ F+ ++LI MYSKCG
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 94 YFGWGLRVFDEMAER-NLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
+ F +++ + + V+W ++ Q+G + L ++ M + +++
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 153 KVCVSMGASEFGYSI-----HCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
C G + G + + ++ R+E + ++ + G V A+ + S+
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHY----AAAVDLLGRAGLVNKAKELIESMP 573
Query: 208 -SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
+ D +G CG E V++ L E D +T+++
Sbjct: 574 LNPDPMVLKTFLGVCRACG-EIEMATQVANHLLEIEPEDHFTYVS 617
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 206/776 (26%), Positives = 369/776 (47%), Gaps = 79/776 (10%)
Query: 61 VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
+LG H I+ + FL NNLI+MYSKCG + RVFD+M +R+LVSW I++A
Sbjct: 56 MLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 121 IQNGE-----FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
Q+ E ++ ++ + + + ++K+C+ G S H +A KI
Sbjct: 116 AQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIG 175
Query: 176 I---------------------------EKNPFVGCSVLNF----YAKLG------DVAA 198
+ E+ P+ + N Y ++G D+++
Sbjct: 176 LDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSS 235
Query: 199 A------------ERVFYSISSDDVGC--------------------WNAMIGGYAHCGY 226
A R+ IS DD N + Y H G
Sbjct: 236 AFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
L + M+ + D+ TFI L V +G+Q+H + ++ ++ +++ N+
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 287 LIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPN 346
LI+MY K +A VF+ M+++D+ISWN++ G ++N + LF + + G +P+
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 347 HVTFSILLRQCGKLLD-LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
T + +L+ L + L L Q+ A+ + + V+++LI + R ++ A +F
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
+ ++ ++ WN +++GY + LK F + + G + T V +TC
Sbjct: 476 ERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAIN 534
Query: 466 MVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNS-FEFSNGAERLDMASWGAMMSAL 524
Q+H IK+G+ ++ S ++ YV G + + F F + D+A W M+S
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593
Query: 525 VHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEV 584
+ G A +F + G PDE+ + T+ + + + A ++ + IH +KL +
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 585 YVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL 644
+V ++++D YAKCG I A F + ++ +N +++ A HG E +++F +MK
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLF-KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 645 ANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLE 704
++P + TF+ V+SACSH GLV + +SM YG++P + Y CL D L R G ++
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772
Query: 705 DAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
A+++IE M + S ++YR+LL+ CR+ G+ E G+ + KLL L P + +A+VLLS
Sbjct: 773 QAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 212/435 (48%), Gaps = 6/435 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D + L+ + + S LG QVH +KLG + + N+LI MY K FG+ VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS- 161
D M+ER+L+SW +++ QNG + +++ + G P+++ + SV+K S+
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGL 433
Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
+H A+KI + FV ++++ Y++ + AE + + + D+ WNAM+ GY
Sbjct: 434 SLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE-ILFERHNFDLVAWNAMMAGY 492
Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
G + L + + M +G D +T + C + + G+Q+H I+S + +
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
+ + ++DMY+K M A F+ + D ++W T+ G EN + +F + L
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
G P+ T + L + L L+ G Q+ AL ++ V +SL+ M+ +CG+++ A
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 402 HSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR- 460
+ +F + NIT WN +L G + + L+ F + G++ + TF V+ C
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 461 ---SENQQMVGQIHG 472
SE + + +HG
Sbjct: 733 GLVSEAYKHMRSMHG 747
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 198/462 (42%), Gaps = 48/462 (10%)
Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
+D +G+ H I+ E ++N LI MY K + YA +VF++M D+D++SWN++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 320 GGFSEN-----KNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
++++ +N Q LF + +T S +L+ C + A
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
G +E V +L+ ++ + G V+ +F+ + Y+++ WN +L Y + +
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYV 494
SG+ N T +++ +I G G +KS+
Sbjct: 233 LSSAFHSSGLNPNEITL-------------RLLARISGDDSDAG----------QVKSFA 269
Query: 495 NFGQLDNSFE--FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
N + E F N +S +H G + F +VE+ + D+
Sbjct: 270 NGNDASSVSEIIFRNKG-----------LSEYLHSGQYSALLKCFADMVESDVECDQVTF 318
Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
+L + + + + +H +KLG + + V++++I+ Y K AR FD + +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD-NMS 377
Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCL 672
D+I +N++I A +GL EA+ +F ++ L+P Q T SV+ A S + +G
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLS 434
Query: 673 LFKSMDSQ-YGMQPSPDCY--GCLVDMLSRNGYLEDAKHVIE 711
L K + + D + L+D SRN +++A+ + E
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE 476
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 310 bits (794), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/581 (29%), Positives = 310/581 (53%), Gaps = 8/581 (1%)
Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG---YGFEALNVVSSMLFEGI 242
++NFYAK G +A A +F +I DV WN++I GY+ G + + + M + I
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
+ YT + S + +GRQ H L+++ I + +L+ MY K+ ++ K
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS---GSRPNHVTFSILLRQCGK 359
VF M +++ +W+T+ G++ + +F+ F+ GS ++V F+ +L
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
+ + LG Q+ C+ + G L ++++L+ M+ +C ++ A +FD+ +N TW+ +
Sbjct: 234 TIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAM 293
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
++GY N + +K F ++ +G++ + T V+ C + Q+H ++K GF
Sbjct: 294 VTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGF 353
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
+ ++L+ Y G L ++ + + + D+A W +++S V N EA+ ++
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
+ AG P++ + ++L +C+++ + K +H IK GF EV + SA+ Y+KCG
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
++ + F ++ N DV+ +N +I +H+G EA+E+F++M ++P TFV+++S
Sbjct: 474 LEDGNLVFRRTPN-KDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
ACSHKG V++G F M Q G+ P D Y C+VD+LSR G L++AK IE
Sbjct: 533 ACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGL 592
Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
++R LLS C+ HG ELG +A EKL+ L + + +V LS
Sbjct: 593 CLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLS 633
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/591 (25%), Positives = 282/591 (47%), Gaps = 8/591 (1%)
Query: 47 LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
L K L+ ++ V G VHG I++ G + I N L+ Y+KCG +F+ +
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 107 ERNLVSWTLIVSAAIQNGEFDMG---LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
+++VSW +++ QNG ++++ +M+ +PN + + + K S+ +S
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 164 GYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAH 223
G H +K+ + +V S++ Y K G V +VF + + W+ M+ GYA
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 224 CGYGFEALNVVSSMLFE---GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
G EA+ V + L E G D Y F L + +GRQIH + I++ +
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL 340
+++ NAL+ MY K ++ A K+F+ D++ I+W+ + G+S+N + LF +
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 341 SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEM 400
+G +P+ T +L C + L+ G QL L GF T++L+ M+ + G +
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 401 AHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR 460
A FD + +++ W L+SGY N + + L + + +G+ N T V++ C
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSS 435
Query: 461 SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAM 520
++ Q+HG IK GF I S+L Y G L++ D+ SW AM
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAM 495
Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK-SIHPFVIKLG 579
+S L H G EA+ +F ++ G +PD+ I+++C+ G +R + ++G
Sbjct: 496 ISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIG 555
Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
+ +V + ++D ++ G +K A+ + + + + ++ L+ A +HG
Sbjct: 556 LDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHG 606
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 307 bits (786), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/709 (27%), Positives = 343/709 (48%), Gaps = 13/709 (1%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE-------RNLVSWTL 115
G +HG +V LG+ D F+ +L+ MY KCG+ + ++VFD ++ R++ W
Sbjct: 79 GKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNS 138
Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG--ASEFGYSIHCFALK 173
++ + F G+ + M G P+ F++ V+ V G E G IH F L+
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 174 IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMIGGYAHCGYGFEALN 232
++ + F+ ++++ Y K G A RVF I +V WN MI G+ G +L+
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 233 VVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYI 292
+ + + +F AL CS + GRQIH +++ + + +L+ MY
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 293 KSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSI 352
K + A VF + DK + WN + ++EN LF P+ T S
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 353 LLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
++ C L + G + + S+L+ ++ +CG A+ VF ++ K+
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWES--GVEVNGCTFFYVVETCCRSENQQMVGQI 470
+ W L+SG C N + LK F ++ + ++ + V C E + Q+
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
HG++IKTG ++ SSLI Y G + + + +M +W +M+S
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558
Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
++ +F+ ++ G PD + ++L + ++ + + KS+H + ++LG ++ ++ +A+
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNAL 618
Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
ID Y KCG K A F + +I +N +I Y HG A+ +FD+MK A P
Sbjct: 619 IDMYVKCGFSKYAENIF-KKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPD 677
Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
TF+S++SAC+H G V++G +F+ M YG++P+ + Y +VD+L R G LE+A I
Sbjct: 678 DVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFI 737
Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
+ MP + +++ LLS R H N ELG ++EKLL + P+ + +V L
Sbjct: 738 KAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQL 786
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 157/635 (24%), Positives = 292/635 (45%), Gaps = 8/635 (1%)
Query: 60 RVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAER-NLVSWTLIVS 118
R G Q+HG +++ D FL+ LI MY K G RVF E+ ++ N+V W +++
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
+G + L +Y+ K N + + C S FG IHC +K+ +
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
+P+V S+L+ Y+K G V AE VF + + WNAM+ YA YG+ AL++ M
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
+ + D +T N + CS++ ++ G+ +H + + ++ + +I +AL+ +Y K
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLF--HKFILSGSRPNHVTFSILLRQ 356
A+ VF+ M +KD+++W +L G +N + +F K +P+ + +
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 357 CGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
C L L GLQ+ + G + V SSLI ++ +CG EMA VF ++S +N+ W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
N ++S Y N + F + G+ + + V+ + + +HG ++
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
G S ++ ++LI YV G + + + +W M+ G A+++
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYA 595
F + +AGE PD+ +++++C G + K+I F+ + G + + ++D
Sbjct: 666 FDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLG 725
Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQ-ATF 654
+ G ++ A D ++ L+ A H V + I KL ++P + +T+
Sbjct: 726 RAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTY 783
Query: 655 VSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
V +++ GL ++ L M + G+ P C
Sbjct: 784 VQLINLYMEAGLKNEAAKLLGLMKEK-GLHKQPGC 817
Score = 210 bits (534), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 163/632 (25%), Positives = 297/632 (46%), Gaps = 18/632 (2%)
Query: 117 VSAAIQNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
+ A IQ GE+ L +Y ++ F + F S++K C ++ +G +IH + +
Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLG 90
Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVF-------YSISSDDVGCWNAMIGGYAHCGYGF 228
+PF+ S++N Y K G + A +VF +S+ DV WN+MI GY
Sbjct: 91 WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFK 150
Query: 229 EALNVVSSMLFEGITMDKYTFINALQGCSLVADF--DIGRQIHGLIIRSEVECSISIVNA 286
E + ML G+ D ++ + +F + G+QIHG ++R+ ++ + A
Sbjct: 151 EGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTA 210
Query: 287 LIDMYIKSSGMDYAFKVFERMADK-DVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
LIDMY K A++VF + DK +V+ WN + GF + + L+ + +
Sbjct: 211 LIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKL 270
Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
+F+ L C + + G Q+ C + G ++ V +SL+ M+ +CG V A +VF
Sbjct: 271 VSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVF 330
Query: 406 DNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQ 465
V K + WN +++ Y N L F + + V + T V+ +CC
Sbjct: 331 SCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI-SCCSVLGLY 389
Query: 466 MVGQ-IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
G+ +H + K S I S+L+ Y G +++ E DM +WG+++S L
Sbjct: 390 NYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGL 449
Query: 525 VHQGHNHEAVTIFHSLVEAGE--KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNT 582
G EA+ +F + + + KPD I+ ++ N+CA + A + +H +IK G
Sbjct: 450 CKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 583 EVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM 642
V+V S++ID Y+KCG + A F S ++ +++ +N++I Y+ + L ++++F+ M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVF-TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLM 568
Query: 643 KLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGY 702
+ P + SV+ A S + KG L + G+ L+DM + G+
Sbjct: 569 LSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 703 LEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
+ A+++ + M + S + ++ G HG+
Sbjct: 628 SKYAENIFKKMQHK-SLITWNLMIYGYGSHGD 658
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 139/295 (47%), Gaps = 12/295 (4%)
Query: 25 IHRLCGNNQFCS-----------DSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL 73
I LC N +F D L+ D + + L++ G QVHG ++K
Sbjct: 446 ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT 505
Query: 74 GFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMY 133
G ++F+ ++LI +YSKCG L+VF M+ N+V+W ++S +N ++ + ++
Sbjct: 506 GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Query: 134 VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKL 193
M + G P+ ++ SV+ S + G S+H + L++ I + + ++++ Y K
Sbjct: 566 NLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKC 625
Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINAL 253
G AE +F + + WN MI GY G AL++ M G + D TF++ +
Sbjct: 626 GFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLI 685
Query: 254 QGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAFKVFERM 307
C+ + G+ I + + +E ++ ++D+ ++ ++ A+ + M
Sbjct: 686 SACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP---DEYILGTILNSCAAIGAYQRTKSI 571
AS + + AL+ +G +A+ ++ G P + ++L +C+A+ K+I
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 572 HPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD------QSFNSNDVIVYNTLIMA 625
H V+ LG+ + ++A+++++ Y KCG + A FD ++ DV V+N++I
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 626 YAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDK-------GCLLFKSMD 678
Y E + F +M + ++P + V+S +G + G +L S+D
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD 202
Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHV-IEI 712
+ ++ + L+DM + G DA V +EI
Sbjct: 203 TDSFLKTA------LIDMYFKFGLSIDAWRVFVEI 231
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 181/635 (28%), Positives = 323/635 (50%), Gaps = 6/635 (0%)
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
+G+ L + M N +P+ F S++K C S+ FG SIH L + ++
Sbjct: 24 HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYI 83
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
S++N YAK G +A A +VF + DV W AMIG Y+ G EA ++V+ M F+GI
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143
Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
T + L G V + + +H + +C I+++N+++++Y K + A
Sbjct: 144 KPGPVTLLEMLSG---VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
+F++M +D++SWNT+ G++ N + L ++ G RP+ TF L G + D
Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCD 260
Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
L++G L C + GF + ++ ++LI M+ +CG E ++ V + + K++ W ++SG
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
L F + +SG +++ VV +C + + + +HG +++ G++
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL-V 541
+SLI Y G LD S D+ SW A++S +A+ +F +
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
+ ++ D + + ++L +C++ GA K IH VI+ V +A++D Y+KCG ++
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
A+ FD S + DV+ + LI Y HG A+EI+ + + ++P+ F++V+S+C
Sbjct: 501 AAQRCFD-SISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC 559
Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
SH G+V +G +F SM +G++P+ + C+VD+L R +EDA + +PS V
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDV 619
Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAH 756
+L CR +G E+ + E ++ L P DA H
Sbjct: 620 LGIILDACRANGKTEVEDIICEDMIELKP-GDAGH 653
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 273/536 (50%), Gaps = 27/536 (5%)
Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
+N+ I + G + L+ SSML + D +TF + L+ C+ + G IH ++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
+ I ++L+++Y K + +A KVFE M ++DV+ W + G +S G+ S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL---ALHCGFLDEENVTSSLIY 390
L ++ G +P VT LL +L++ QLQCL A+ GF + V +S++
Sbjct: 134 LVNEMRFQGIKPGPVT---LLEMLSGVLEIT---QLQCLHDFAVIYGFDCDIAVMNSMLN 187
Query: 391 MFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
++C+C V A +FD + +++ +WN ++SGY +++LK + G+ + T
Sbjct: 188 LYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQT 247
Query: 451 F---FYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
F V T C E +M +H I+KTGF ++ ++LI Y+ G+ + S+
Sbjct: 248 FGASLSVSGTMCDLEMGRM---LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLE 304
Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
D+ W M+S L+ G +A+ +F ++++G + +++ SCA +G++
Sbjct: 305 TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDL 364
Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
S+H +V++ G+ + +++I YAKCG + + + F++ N D++ +N +I YA
Sbjct: 365 GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER-MNERDLVSWNAIISGYA 423
Query: 628 HHGLVSEAMEIFDKMKLANLQPSQA-TFVSVMSACSHKGLVDKG----CLLFKSMDSQYG 682
+ + +A+ +F++MK +Q + T VS++ ACS G + G C++ +S
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF----- 478
Query: 683 MQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELG 738
++P LVDM S+ GYLE A+ + + ++ + + L++G HG ++
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIA 533
Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 207/412 (50%), Gaps = 1/412 (0%)
Query: 66 VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
+H V GF DI + N+++ +Y KC + G +FD+M +R++VSW ++S G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 126 FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCS 185
LK+ M+ +G P++ G+ + V +M E G +HC +K + + + +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMD 245
++ Y K G A+ RV +I + DV CW MI G G +AL V S ML G +
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345
Query: 246 KYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFE 305
+ + C+ + FD+G +HG ++R +N+LI MY K +D + +FE
Sbjct: 346 SEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFE 405
Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLD 364
RM ++D++SWN + G+++N + + LF + + + + T LL+ C L
Sbjct: 406 RMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALP 465
Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
+G + C+ + V ++L+ M+ +CG +E A FD++S+K++ +W L++GY
Sbjct: 466 VGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYG 525
Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
F+ L+ + SG+E N F V+ +C + Q +I ++++
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/593 (22%), Positives = 276/593 (46%), Gaps = 5/593 (0%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L D L +L+ G +H ++ GF++D ++ ++L+ +Y+K G
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHAR 101
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
+VF+EM ER++V WT ++ + G + +M+ G P + ++ + +
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEIT 161
Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
+ +H FA+ + + V S+LN Y K V A+ +F + D+ WN MI
Sbjct: 162 QLQ---CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
GYA G E L ++ M +G+ D+ TF +L + D ++GR +H I+++ +
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
+ + ALI MY+K + +++V E + +KDV+ W + G + +F + +
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 340 LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVE 399
SGS + + ++ C +L DLG + L G+ + +SLI M+ +CG ++
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNI-WESGVEVNGCTFFYVVETC 458
+ +F+ ++ +++ +WN ++SGY N L F + +++ +V+ T +++ C
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQAC 458
Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
+ + IH +I++ C + ++L+ Y G L+ + + D+ SWG
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWG 518
Query: 519 AMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK- 577
+++ G A+ I+ + +G +P+ I +L+SC+ G Q+ I +++
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRD 578
Query: 578 LGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHG 630
G + V+D + I+ A + ++F + V ++ A +G
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANG 631
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 305 bits (782), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 201/714 (28%), Positives = 361/714 (50%), Gaps = 18/714 (2%)
Query: 61 VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
+ G Q+HG + KL + D + N LI+MY KC G G+ L F ++ +N VSW I+S
Sbjct: 121 LFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISV 180
Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY--SIHCFALKIRIE 177
Q G+ +++ M+ +G P E+ GS++ S+ + I C K +
Sbjct: 181 YSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLL 240
Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNV---V 234
+ FVG +++ +AK G ++ A +VF + + + N ++ G +G EA + +
Sbjct: 241 TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 235 SSMLFEGITMDKYT-FINALQGCSLVADFDI--GRQIHGLIIRSE-VECSISIVNALIDM 290
+SM+ ++ + Y +++ SL + + GR++HG +I + V+ + I N L++M
Sbjct: 301 NSMI--DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
Y K + A +VF M DKD +SWN++ G +N + + P T
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
L C L LG Q+ +L G +V+++L+ ++ G + +F ++
Sbjct: 419 ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE 478
Query: 411 KNITTWNELLSGYCFNCCD-ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ 469
+ +WN ++ + + + F N +G ++N TF V+ ++ Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 470 IHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGAERLDMASWGAMMSALVHQG 528
IHG +K + ++LI Y G++D + FS AER D +W +M+S +H
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 529 HNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
+A+ + +++ G++ D ++ T+L++ A++ +R +H ++ ++V V S
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKL-ANL 647
A++D Y+KCG + A + F + + +N++I YA HG EA+++F+ MKL
Sbjct: 659 ALVDMYSKCGRLDYA-LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 648 QPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
P TFV V+SACSH GL+++G F+SM YG+ P + + C+ D+L R G L+ +
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777
Query: 708 HVIEIMPFQPSPTVYRSLLSG-CRIHGNK-ELGEWASEKLLLLLPKNDAAHVLL 759
IE MP +P+ ++R++L CR +G K ELG+ A+E L L P+N +VLL
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLL 831
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 172/681 (25%), Positives = 311/681 (45%), Gaps = 13/681 (1%)
Query: 67 HGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEF 126
H + K D++L NNLI Y + G +VFDEM RN VSW IVS +NGE
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 127 DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--FGYSIHCFALKIRIEKNPFVGC 184
L DM G N++A SV++ C +G+ FG IH K+ + V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 185 SVLNFYAK-LGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
+++ Y K +G V A F I + WN++I Y+ G A + SSM ++G
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 244 MDKYTFINAL-QGCSLV-ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+YTF + + CSL D + QI I +S + + + + L+ + KS + YA
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF--ILSGSRPNHVTF--SILLRQC 357
KVF +M ++ ++ N L G K + LF ++ S ++V S
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 358 GKLLDLDLGLQLQCLALHCGFLD-EENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTW 416
+ + L G ++ + G +D + + L+ M+ +CG++ A VF ++ K+ +W
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 417 NELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
N +++G N C + ++ + ++ + T + +C + ++ QIHG +K
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN-HEAVT 535
G + ++L+ Y G L+ + + D SW +++ AL + EAV
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 536 IFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYA 595
F + AG+K + ++L++ +++ + K IH +K E +A+I Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 596 KCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFV 655
KCG++ G F + D + +N++I Y H+ L+++A+++ M + +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 656 SVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF 715
+V+SA + +++G + + + ++ LVDM S+ G L+ A MP
Sbjct: 624 TVLSAFASVATLERG-MEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 716 QPSPTVYRSLLSGCRIHGNKE 736
+ S + + S++SG HG E
Sbjct: 683 RNSYS-WNSMISGYARHGQGE 702
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 182/390 (46%), Gaps = 9/390 (2%)
Query: 47 LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
L SLS +LK LG Q+HG +KLG ++ + N L+ +Y++ GY ++F M
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 107 ERNLVSWTLIVSA-AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
E + VSW I+ A A + +++ + G N SV+ S+ E G
Sbjct: 478 EHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS-DDVGCWNAMIGGYAHC 224
IH ALK I +++ Y K G++ E++F ++ D WN+MI GY H
Sbjct: 538 QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHN 597
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
+AL++V ML G +D + + L + VA + G ++H +R+ +E + +
Sbjct: 598 ELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG 657
Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-S 343
+AL+DMY K +DYA + F M ++ SWN++ G++ + + LF L G +
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQT 717
Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
P+HVTF +L C L+ G + + ++ G S + + R G ++
Sbjct: 718 PPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLE 777
Query: 403 SVFDNVSYK-NITTWNELLSGYCFNCCDAD 431
+ + K N+ W +L CC A+
Sbjct: 778 DFIEKMPMKPNVLIWRTVLGA----CCRAN 803
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 207/464 (44%), Gaps = 20/464 (4%)
Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
R H + ++ ++ + + N LI+ Y+++ A KVF+ M ++ +SW + G+S
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL--LDLDLGLQLQCLALHCGFLDEE 382
N + + G N F +LR C ++ + + G Q+ L + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 383 NVTSSLIYMFCRC-GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
V++ LI M+ +C G+V A F ++ KN +WN ++S Y + F ++
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 442 SGVEVNGCTFFYVVETCCR--SENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL 499
G TF +V T C + +++ QI I K+G + ++ S L+ ++ G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 500 DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF---HSLVEAGEKPDEYILGTIL 556
+ + N E + + +M LV Q EA +F +S+++ P+ Y++ +L
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV--SPESYVI--LL 315
Query: 557 N-----SCAAIGAYQRTKSIHPFVIKLGF-NTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
+ S A ++ + +H VI G + V + + +++ YAKCG I AR F
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-YF 374
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
D + +N++I +G EA+E + M+ ++ P T +S +S+C+ G
Sbjct: 375 MTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG 434
Query: 671 CLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMP 714
+ + G+ + L+ + + GYL + + + MP
Sbjct: 435 QQIHGE-SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
R D A LS ++ + G +VH V+ +D+ + + L+ MYSKCG + LR
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFA--VGSVMKVCVSM 158
F+ M RN SW ++S ++G+ + LK++ MK +G P + VG V+ C
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVG-VLSACSHA 734
Query: 159 GASEFGY 165
G E G+
Sbjct: 735 GLLEEGF 741
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 334/668 (50%), Gaps = 29/668 (4%)
Query: 136 MKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLG 194
M +G P + S++K C+ G +H ++ IE + + S+++ Y+K G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 195 DVAAAERVFYSIS---SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFIN 251
D A AE VF ++ DV W+AM+ Y + G +A+ V L G+ + Y +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 252 ALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIK-SSGMDYAFKVFERMAD 309
++ CS +GR G ++++ E + + +LIDM++K + + A+KVF++M++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
+V++W + + P + F +LSG + T S + C +L +L LG QL
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 370 QCLALHCGFLDEENVTSSLIYMFCRC---GAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
A+ G +D+ V SL+ M+ +C G+V+ VFD + ++ +W L++GY N
Sbjct: 292 HSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 427 CCDA-DVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
C A + + F + G VE N TF + C + ++ Q+ G K G +S
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS 409
Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG 544
+ +S+I +V +++++ ++ S+ + + +A + + E
Sbjct: 410 VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERE 469
Query: 545 EKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGAR 604
+ ++L+ A +G+ ++ + IH V+KLG + V +A+I Y+KCG I A
Sbjct: 470 LGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 605 MAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
F+ N N VI + ++I +A HG +E F++M ++P++ T+V+++SACSH
Sbjct: 530 RVFNFMENRN-VISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 588
Query: 665 GLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRS 724
GLV +G F SM + ++P + Y C+VD+L R G L DA I MPFQ V+R+
Sbjct: 589 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 648
Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSK--------------RKRQREGNL 770
L CR+H N ELG+ A+ K+L L P AA++ LS R++ +E NL
Sbjct: 649 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 708
Query: 771 LDHEGVCN 778
+ EG C+
Sbjct: 709 V-KEGGCS 715
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 261/545 (47%), Gaps = 26/545 (4%)
Query: 39 FLRKDPIFLAKSLSLSENLKSRV------LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
+ +D I S++ S LKS + LG VH +++ D L N+LI++YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 93 GYFGWGLRVFDEM---AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVG 149
G VF+ M +R++VSW+ +++ NG +K++V+ G +PN++
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 150 SVMKVCVSMGASEFGYSIHCFALKI-RIEKNPFVGCSVLNFYAK-LGDVAAAERVFYSIS 207
+V++ C + G F +K E + VGCS+++ + K A +VF +S
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS 230
Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQ 267
+V W MI G+ EA+ M+ G DK+T + C+ + + +G+Q
Sbjct: 231 ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 268 IHGLIIRS----EVECSISIVNALIDMYIKSSG---MDYAFKVFERMADKDVISWNTLFG 320
+H IRS +VECS L+DMY K S +D KVF+RM D V+SW L
Sbjct: 291 LHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 321 GFSENKNPGQTA-SLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
G+ +N N A +LF + I G PNH TFS + CG L D +G Q+ A G
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 379 LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCN 438
+V +S+I MF + +E A F+++S KN+ ++N L G C N K
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 439 IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQ 498
I E + V+ TF ++ + + QIH ++K G S +C++LI Y G
Sbjct: 465 ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGS 524
Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
+D + N E ++ SW +M++ G + F+ ++E G KP+E IL++
Sbjct: 525 IDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 559 CAAIG 563
C+ +G
Sbjct: 585 CSHVG 589
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 252/513 (49%), Gaps = 20/513 (3%)
Query: 62 LGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKC-GYFGWGLRVFDEMAERNLVSWTLIVSA 119
+G G ++K G F +D+ + +LI M+ K F +VFD+M+E N+V+WTL+++
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 120 AIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKN 179
+Q G ++ ++DM +GF ++F + SV C + G +H +A++ + +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 180 PFVGCSVLNFYAKL---GDVAAAERVFYSISSDDVGCWNAMIGGY-AHCGYGFEALNVVS 235
V CS+++ YAK G V +VF + V W A+I GY +C EA+N+ S
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFS 361
Query: 236 SMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKS 294
M+ +G + + +TF +A + C ++D +G+Q+ G + + + S+ N++I M++KS
Sbjct: 362 EMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILL 354
M+ A + FE +++K+++S+NT G N N Q L + + TF+ LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNIT 414
+ + G Q+ + G + V ++LI M+ +CG+++ A VF+ + +N+
Sbjct: 482 SGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVI 541
Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCR----SENQQMVGQI 470
+W +++G+ + VL+TF + E GV+ N T+ ++ C SE + +
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Query: 471 H-GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA-LVHQ 527
+ IK Y C ++ G L ++FEF N + D+ W + A VH
Sbjct: 602 YEDHKIKPKMEH--YAC--MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 528 GHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
+ L +P YI + + +CA
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACA 690
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 56 NLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTL 115
NL +G QV G K G ++ + N++I+M+ K R F+ ++E+NLVS+
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 116 IVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
+ +N F+ K+ ++ + F S++ ++G+ G IH +K+
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
+ N V ++++ Y+K G + A RVF + + +V W +MI G+A G+ L +
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIG-RQIHGLIIRSEVECSISIVNALIDMYIKS 294
M+ EG+ ++ T++ L CS V G R + + +++ + ++D+ ++
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 295 SGMDYAFKVFERMA-DKDVISWNTLFGG 321
+ AF+ M DV+ W T G
Sbjct: 625 GLLTDAFEFINTMPFQADVLVWRTFLGA 652
Score = 70.1 bits (170), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%)
Query: 47 LAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
A LS N+ S G Q+H +VKLG + + + N LI+MYSKCG RVF+ M
Sbjct: 477 FASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
RN++SWT +++ ++G L+ + M G PNE +++ C +G G+
Sbjct: 537 NRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGW 595
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 303 bits (777), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/638 (28%), Positives = 326/638 (51%), Gaps = 24/638 (3%)
Query: 150 SVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV-----GCSVLNFYAKLGDVAAAERVFY 204
SV+++C + + G + F I N FV G + Y GD+ A RVF
Sbjct: 99 SVLQLCADSKSLKDGKEVDNF-----IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFD 153
Query: 205 SISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDI 264
+ + WN ++ A G ++ + M+ G+ MD YTF + S +
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 265 GRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSE 324
G Q+HG I++S S+ N+L+ Y+K+ +D A KVF+ M ++DVISWN++ G+
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 325 NKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENV 384
N + S+F + ++SG + T + C + LG + + + F E+
Sbjct: 274 NGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 385 TSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGV 444
++L+ M+ +CG ++ A +VF +S +++ ++ +++GY + +K F + E G+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 445 EVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
+ T V+ C R ++H I + ++ ++L+ Y G + +
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 505 FSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIG 563
+ D+ SW ++ + +EA+++F+ L+E PDE + +L +CA++
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 564 AYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLI 623
A+ + + IH ++++ G+ ++ +VA++++D YAKCG + A M FD S D++ + +I
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDD-IASKDLVSWTVMI 572
Query: 624 MAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGM 683
Y HG EA+ +F++M+ A ++ + +FVS++ ACSH GLVD+G F M + +
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 684 QPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASE 743
+P+ + Y C+VDML+R G L A IE MP P T++ +LL GCRIH + +L E +E
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 744 KLLLLLPKNDAAHVLLS------------KRKRQREGN 769
K+ L P+N +VL++ KR R+R G
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQ 730
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/651 (25%), Positives = 294/651 (45%), Gaps = 8/651 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
DP L L L + KS G +V I GF D L + L MY+ CG RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
DE+ + W ++++ ++G+F + ++ M ++G + + V K S+ +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
G +H F LK + VG S++ FY K V +A +VF ++ DV WN++I GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
G + L+V ML GI +D T ++ GC+ +GR +H + +++
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
N L+DMY K +D A VF M+D+ V+S+ ++ G++ G+ LF + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAH 402
P+ T + +L C + LD G ++ + V+++L+ M+ +CG+++ A
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 403 SVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRS 461
VF + K+I +WN ++ GY NC + L F + E + T V+ C
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 462 ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMM 521
+IHG I++ G+ S ++ +SL+ Y G L + + D+ SW M+
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 522 SALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQ---RTKSIHPFVIKL 578
+ G EA+ +F+ + +AG + DE ++L +C+ G R +I K+
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
E Y + ++D A+ GD+ A + D ++ L+ H V A ++
Sbjct: 633 EPTVEHY--ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 639 FDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDC 689
+ K+ L+P + +M+ + + + Q G++ +P C
Sbjct: 691 AE--KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGC 739
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 204/434 (47%), Gaps = 14/434 (3%)
Query: 244 MDKYTFINALQGCSLVADFDIGRQI------HGLIIRSEVECSISIVNALIDMYIKSSGM 297
+D T + LQ C+ G+++ +G +I S + +S+ MY +
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSL------MYTNCGDL 145
Query: 298 DYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC 357
A +VF+ + + + WN L +++ + + LF K + SG + TFS + +
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 358 GKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWN 417
L + G QL L GF + +V +SL+ + + V+ A VFD ++ +++ +WN
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 418 ELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
+++GY N L F + SG+E++ T V C S + +H +K
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
FS C++L+ Y G LD++ + S+ +M++ +G EAV +F
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
+ E G PD Y + +LN CA K +H ++ + +++V++A++D YAKC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFD-KMKLANLQPSQATFVS 656
G ++ A + F + D+I +NT+I Y+ + +EA+ +F+ ++ P + T
Sbjct: 446 GSMQEAELVFSE-MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 657 VMSACSHKGLVDKG 670
V+ AC+ DKG
Sbjct: 505 VLPACASLSAFDKG 518
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 291/584 (49%), Gaps = 1/584 (0%)
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
F +++ + + G V A RVF I S ++ M+ G+A +AL M ++
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
+ Y F L+ C A+ +G++IHGL+++S + + L +MY K ++ A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
KVF+RM ++D++SWNT+ G+S+N + +P+ +T +L L
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
+ +G ++ A+ GF N++++L+ M+ +CG++E A +FD + +N+ +WN ++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 421 SGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFS 480
Y N + + F + + GV+ + + C + + IH ++ G
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Query: 481 SCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
+ +SLI Y ++D + + + SW AM+ G +A+ F +
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
KPD + +++ + A + K IH V++ + V+V +A++D YAKCG I
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
AR+ FD + V +N +I Y HG A+E+F++M+ ++P+ TF+SV+SA
Sbjct: 490 MIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISA 548
Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
CSH GLV+ G F M Y ++ S D YG +VD+L R G L +A I MP +P+
Sbjct: 549 CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVN 608
Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKR 764
VY ++L C+IH N E A+E+L L P + HVLL+ R
Sbjct: 609 VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYR 652
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 235/498 (47%), Gaps = 33/498 (6%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
+G ++HG +VK GF+ D+F L MY+KC +VFD M ER+LVSW IV+
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYS 212
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
QNG M L+M M P+ + SV+ ++ G IH +A++ +
Sbjct: 213 QNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
+ ++++ YAK G + A ++F + +V WN+MI Y EA+ + ML EG
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+ + + AL C+ + D + GR IH L + ++ ++S+VN+LI MY K +D A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
+F ++ + ++SWN + GF++N P + F + +P+ T+ ++ +L
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
+ + + VT++L+ M+ +CGA+ +A +FD +S +++TTWN ++
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
GY + L+ F + + ++ NG TF V+ C S G
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS----------------GLVE 556
Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
G C ++K N + L M +GAM+ L G +EA + ++
Sbjct: 557 AGLKCFYMMK--------------ENYSIELSMDHYGAMVDLLGRAGRLNEA---WDFIM 599
Query: 542 EAGEKPDEYILGTILNSC 559
+ KP + G +L +C
Sbjct: 600 QMPVKPAVNVYGAMLGAC 617
Score = 212 bits (540), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/555 (24%), Positives = 252/555 (45%), Gaps = 10/555 (1%)
Query: 10 FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
F+ P +R R H L N ++ + + L + SL E Q+
Sbjct: 8 FSTVPQIPNPPSRHR-HFLSERNYIPANVYEHPAALLLERCSSLKE-------LRQILPL 59
Query: 70 IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
+ K G + F Q L++++ + G RVF+ + + V + ++ + + D
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
L+ +V M+ + P + ++KVC G IH +K + F + N
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
YAK V A +VF + D+ WN ++ GY+ G AL +V SM E + T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
++ L S + +G++IHG +RS + ++I AL+DMY K ++ A ++F+ M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
++V+SWN++ + +N+NP + +F K + G +P V+ L C L DL+ G +
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
L++ G +V +SLI M+C+C V+ A S+F + + + +WN ++ G+ N
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSL 489
D L F + V+ + T+ V+ IHG ++++ ++ ++L
Sbjct: 420 IDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 490 IKSYVNFGQ-LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
+ Y G + F +ER + +W AM+ G A+ +F + + KP+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 549 EYILGTILNSCAAIG 563
+++++C+ G
Sbjct: 539 GVTFLSVISACSHSG 553
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 235/486 (48%), Gaps = 16/486 (3%)
Query: 253 LQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV 312
L+ CS + + RQI L+ ++ + L+ ++ + +D A +VFE + K
Sbjct: 44 LERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 313 ISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
+ ++T+ GF++ + + F + P F+ LL+ CG +L +G ++ L
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
+ GF + + L M+ +C V A VFD + +++ +WN +++GY N
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
L+ ++ E ++ + T V+ + +IHG +++GF S I ++L+
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYIL 552
Y G L+ + + +G ++ SW +M+ A V + EA+ IF +++ G KP + +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
L++CA +G +R + IH ++LG + V V +++I Y KC ++ A F +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK-LQ 399
Query: 613 SNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA-----CSHKGLV 667
S ++ +N +I+ +A +G +A+ F +M+ ++P T+VSV++A +H
Sbjct: 400 SRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKW 459
Query: 668 DKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLS 727
G ++ +D + + LVDM ++ G + A+ + ++M + T + +++
Sbjct: 460 IHGVVMRSCLDKNVFVTTA------LVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMID 512
Query: 728 GCRIHG 733
G HG
Sbjct: 513 GYGTHG 518
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 301 bits (771), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/675 (29%), Positives = 339/675 (50%), Gaps = 19/675 (2%)
Query: 100 RVFDEMAERN-LVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP---NEFAVGSVMKVC 155
++FD ++RN S +S +++ L ++ + G+ +E + +K C
Sbjct: 29 KLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKAC 88
Query: 156 VSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
G + G IH F+ V +V+ Y K G A +F ++ DV WN
Sbjct: 89 --RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWN 146
Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
++ G+ ALN V M G+ D +T+ AL C F +G Q+ ++++
Sbjct: 147 TILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT 203
Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG-QTASL 334
+E + + N+ I MY +S A +VF+ M+ KD+ISWN+L G S+ G + +
Sbjct: 204 GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVI 263
Query: 335 FHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCR 394
F + G +HV+F+ ++ C DL L Q+ L + G+ V + L+ + +
Sbjct: 264 FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSK 323
Query: 395 CGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYV 454
CG +E SVF +S +N+ +W ++S D + F N+ GV N TF +
Sbjct: 324 CGVLEAVKSVFHQMSERNVVSWTTMISSN-----KDDAVSIFLNMRFDGVYPNEVTFVGL 378
Query: 455 VETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDM 514
+ +E + +IHG IKTGF S + +S I Y F L+++ + ++
Sbjct: 379 INAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREI 438
Query: 515 ASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG--AYQRTKSIH 572
SW AM+S G +HEA+ +F S A P+EY G++LN+ A + ++ + H
Sbjct: 439 ISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCH 497
Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
++KLG N+ V+SA++D YAK G+I + F++ N V+ ++I AY+ HG
Sbjct: 498 AHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQ-FVWTSIISAYSSHGDF 556
Query: 633 SEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGC 692
M +F KM N+ P TF+SV++AC+ KG+VDKG +F M Y ++PS + Y C
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616
Query: 693 LVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKN 752
+VDML R G L++A+ ++ +P P ++ +S+L CR+HGN ++G +E + + P+
Sbjct: 617 MVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 676
Query: 753 DAAHVLLSKRKRQRE 767
++V + ++E
Sbjct: 677 SGSYVQMYNIYAEKE 691
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/547 (27%), Positives = 264/547 (48%), Gaps = 15/547 (2%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G Q+HG GFT+ + + N ++ MY K G F L +F+ + + ++VSW I+S
Sbjct: 95 GCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDD 154
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
N + L V MK+ G + + F + + CV G + +K +E + V
Sbjct: 155 N---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVV 211
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG-YGFEALNVVSSMLFEG 241
G S + Y++ G A RVF +S D+ WN+++ G + G +GFEA+ + M+ EG
Sbjct: 212 GNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREG 271
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+ +D +F + + C D + RQIHGL I+ E + + N L+ Y K ++
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 331
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
VF +M++++V+SW T+ + N S+F G PN VTF L+
Sbjct: 332 SVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
+ GL++ L + GF+ E +V +S I ++ + A+E A F++++++ I +WN ++S
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQM-VGQ-IHGAIIKTGF 479
G+ N + LK F + + N TF V+ +E+ + GQ H ++K G
Sbjct: 447 GFAQNGFSHEALKMFLSAAAETMP-NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
+SC + S+L+ Y G +D S + N + + W +++SA G + +FH
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVA--SAVIDAYAKC 597
+++ PD ++L +C G + I +I++ +N E S ++D +
Sbjct: 566 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV-YNLEPSHEHYSCMVDMLGRA 624
Query: 598 GDIKGAR 604
G +K A
Sbjct: 625 GRLKEAE 631
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 199/421 (47%), Gaps = 9/421 (2%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D + +LS + +LG Q+ +VK G +D+ + N+ I MYS+ G F RVF
Sbjct: 173 DAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVF 232
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDM-GLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGAS 161
DEM+ ++++SW ++S Q G F + ++ DM G + + SV+ C
Sbjct: 233 DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDL 292
Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
+ IH +K E VG +++ Y+K G + A + VF+ +S +V W MI
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352
Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
+A+++ +M F+G+ ++ TF+ + G +IHGL I++
Sbjct: 353 KD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
S+ N+ I +Y K ++ A K FE + +++ISWN + GF++N + +F +
Sbjct: 408 SVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAA 466
Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLA--LHCGFLDEENVTSSLIYMFCRCGAVE 399
+ PN TF +L D+ + +C A L G V+S+L+ M+ + G ++
Sbjct: 467 ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 400 MAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
+ VF+ +S KN W ++S Y + V+ F + + V + TF V+ C
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 460 R 460
R
Sbjct: 587 R 587
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 400 MAHSVFDNVSYKNITT-WNELLSGYCFNCCDADVLKTFCNIWESGV------EVNGCTFF 452
+AH +FD S +N TT N +S A L F + G EV C
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLC--- 82
Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
+ CR + ++ QIHG +GF+S + ++++ Y G+ DN+
Sbjct: 83 -LALKACRGDLKRGC-QIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 513 DMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIH 572
D+ SW ++S N A+ + AG D + T L+ C + +
Sbjct: 141 DVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 573 PFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLV 632
V+K G +++ V ++ I Y++ G +GAR FD+ + D+I +N+L+ + G
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE-MSFKDMISWNSLLSGLSQEGTF 256
Query: 633 S-EAMEIFDKMKLANLQPSQATFVSVMSACSHK 664
EA+ IF M ++ +F SV++ C H+
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHE 289
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 292/572 (51%), Gaps = 6/572 (1%)
Query: 191 AKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTF 249
+ LG + A +F S+ DV +N ++ G++ +L+V + + + + T+
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTY 122
Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
A+ S D GR IHG + + + + + ++ MY K ++ A KVF+RM +
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQ 368
KD I WNT+ G+ +N+ ++ +F I S +R + T +L +L +L LG+Q
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQ 242
Query: 369 LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCC 428
+ LA G + V + I ++ +CG ++M ++F +I +N ++ GY N
Sbjct: 243 IHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 429 DADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSS 488
L F + SG + T +V S + ++ IHG +K+ F S + ++
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTA 359
Query: 489 LIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPD 548
L Y +++++ + + + + SW AM+S G +A+++F + ++ P+
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 549 EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFD 608
+ IL++CA +GA K +H V F + +YV++A+I YAKCG I AR FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479
Query: 609 QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
N+V +NT+I Y HG EA+ IF +M + + P+ TF+ V+ ACSH GLV
Sbjct: 480 LMTKKNEV-TWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVK 538
Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSG 728
+G +F SM +YG +PS Y C+VD+L R G+L+ A IE M +P +V+ +LL
Sbjct: 539 EGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGA 598
Query: 729 CRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
CRIH + L SEKL L P N HVLLS
Sbjct: 599 CRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/598 (21%), Positives = 245/598 (40%), Gaps = 8/598 (1%)
Query: 65 QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
Q H I+ GF NDI L L S G + +F + ++ + +++ N
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
L ++ + K+ PN + G IH A+ + +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
+++ Y K V A +VF + D WN MI GY E++ V ++ E T
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 244 -MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFK 302
+D T ++ L + + + +G QIH L ++ ++ I +Y K +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 303 VFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLD 362
+F D++++N + G++ N + SLF + +LSG+R T L+ G L+
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM- 336
Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
L + L FL +V+++L ++ + +E A +FD K++ +WN ++SG
Sbjct: 337 --LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 423 YCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
Y N D + F + +S N T ++ C + + +H + T F S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
Y+ ++LI Y G + + + + + +W M+S G EA+ IF+ ++
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSI-HPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
+G P +L +C+ G + I + + + GF V + ++D + G ++
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
A + V+ TL+ A H + A + + KL L P + ++S
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE--KLFELDPDNVGYHVLLS 630
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 222/516 (43%), Gaps = 35/516 (6%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L+ + A ++S + + G +HG V G +++ L +N++ MY K
Sbjct: 115 LKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDAR 174
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSM 158
+VFD M E++ + W ++S +N + ++++ D+ + + ++ +
Sbjct: 175 KVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
G IH A K + +V ++ Y+K G + +F D+ +NAMI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
GY G +L++ ++ G + T ++ + + + IHG ++S
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFL 351
Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
S+ AL +Y K + ++ A K+F+ +K + SWN + G+++N SLF +
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV 398
S PN VT + +L C +L L LG + L F V+++LI M+ +CG++
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 399 EMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
A +FD ++ KN TWN ++SGY + + L F + SG+ TF V+ C
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 459 CRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWG 518
H ++K G I +S+I Y FE S + +
Sbjct: 532 S-----------HAGLVKEG----DEIFNSMIHRY--------GFEPS-------VKHYA 561
Query: 519 AMMSALVHQGHNHEAVTIFHSL-VEAGEKPDEYILG 553
M+ L GH A+ ++ +E G E +LG
Sbjct: 562 CMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLG 597
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 186/403 (46%), Gaps = 4/403 (0%)
Query: 34 FCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG 93
++S R D L L L+ LG Q+H K G + ++ I++YSKCG
Sbjct: 211 LINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCG 270
Query: 94 YFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMK 153
G +F E + ++V++ ++ NGE ++ L ++ ++ +G + S++
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 154 VCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
V G Y+IH + LK + V ++ Y+KL ++ +A ++F +
Sbjct: 331 VS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPS 387
Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
WNAMI GY G +A+++ M + + T L C+ + +G+ +H L+
Sbjct: 388 WNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVR 447
Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
++ E SI + ALI MY K + A ++F+ M K+ ++WNT+ G+ + + +
Sbjct: 448 STDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALN 507
Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH-CGFLDEENVTSSLIYMF 392
+F++ + SG P VTF +L C + G ++ +H GF + ++ +
Sbjct: 508 IFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDIL 567
Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
R G ++ A + +S + ++ E L G C D ++ +T
Sbjct: 568 GRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
RS + + Q H II GF + + + L + + G + + + +R D+ +
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL 578
+M H ++++F L ++ + KP+ +++ + + + IH +
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVD 148
Query: 579 GFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
G ++E+ + S ++ Y K ++ AR FD+ D I++NT+I Y + + E++++
Sbjct: 149 GCDSELLLGSNIVKMYFKFWRVEDARKVFDR-MPEKDTILWNTMISGYRKNEMYVESIQV 207
Query: 639 FDKM 642
F +
Sbjct: 208 FRDL 211
>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing protein At5g08490
OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1
Length = 849
Score = 292 bits (748), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 191/743 (25%), Positives = 353/743 (47%), Gaps = 50/743 (6%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSA-AI 121
G +HG + KLG + +++ MY+KC ++F +M + V W ++++ ++
Sbjct: 40 GRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSV 99
Query: 122 QNGEFDMGLKMYVDMK-TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
G M + + M + P+ V+ +CV +G S G S+H + +K +EK+
Sbjct: 100 SCGRETM--RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDT 157
Query: 181 FVGCSVLNFYAKLGDV-AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
VG ++++ YAK G + A F I+ DV WNA+I G++ +A ML
Sbjct: 158 LVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK 217
Query: 240 EGITMDKYTFINALQGCSLVADFDI----GRQIHGLII-RSEVECSISIVNALIDMYIKS 294
E + T N L C+ + D +I GRQIH ++ RS ++ + + N+L+ Y++
Sbjct: 218 EPTEPNYATIANVLPVCASM-DKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRV 276
Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSIL 353
++ A +F RM KD++SWN + G++ N + LFH + G P+ VT +
Sbjct: 277 GRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISI 336
Query: 354 LRQCGKLLDLDLGLQLQCLAL-HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
L C +L DL G ++ L H L++ +V ++LI + R G A+ F +S K+
Sbjct: 337 LPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKD 396
Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
I +WN +L + + L ++ + ++ T +++ C + V ++HG
Sbjct: 397 IISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG 456
Query: 473 AIIKTG-----------------FSSCGYI------------------CSSLIKSYVNFG 497
+K G ++ CG + +SL+ YVN G
Sbjct: 457 YSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSG 516
Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
D++ D+ +W M+ +EA+ +F + G +P+ + +L
Sbjct: 517 SHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLP 576
Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
CA + + + H ++I+ G ++ + ++D YAKCG +K A F QS D++
Sbjct: 577 VCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLV 634
Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
++ ++ YA HG EA+ I+ M +N++P ++++AC H GL+ G ++ S+
Sbjct: 635 MFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSI 694
Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKEL 737
+ +GM+P+ + Y C VD+++R G L+DA + MP +P+ ++ +LL C + +L
Sbjct: 695 RTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDL 754
Query: 738 GEWASEKLLLLLPKNDAAHVLLS 760
G + LL + HVL+S
Sbjct: 755 GHSVANHLLQAESDDTGNHVLIS 777
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 162/673 (24%), Positives = 299/673 (44%), Gaps = 56/673 (8%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY-FGWGL 99
+ + A L L L G +H +I+K G D + N L++MY+K G+ F
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
FD +A++++VSW I++ +N + + M PN + +V+ VC SM
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 160 ---ASEFGYSIHCFALKIR-IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWN 215
A G IH + ++ ++ + FV S+++FY ++G + A +F + S D+ WN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIR 274
+I GYA F+A + +++ +G ++ D T I+ L C+ + D G++IH I+R
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 275 -SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
S + S+ NALI Y + A+ F M+ KD+ISWN + F+++ Q +
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 334 LFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFL---DEENVTSSLIY 390
L H + + VT LL+ C + + ++ ++ G L +E + ++L+
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 391 MFCRCGAVEMAHSV--------------------------------FDNVSYKNITTWNE 418
+ +CG VE AH + F +S ++TTW+
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSL 538
Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
++ Y +CC + + F I G+ N T ++ C + + +V Q HG II+ G
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
+ +L+ Y G L +++ R D+ + AM++ G EA+ I+
Sbjct: 599 LGDI-RLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKC 597
+ E+ KPD + T+L +C G Q I+ + + G + + +D A+
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMA------------YAHHGLVSEAMEIFDKMKLA 645
G + A Q + ++ TL+ A A+H L +E+ + + + ++
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777
Query: 646 NLQPSQATFVSVM 658
N+ + A + VM
Sbjct: 778 NMYAADAKWEGVM 790
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 198/405 (48%), Gaps = 24/405 (5%)
Query: 238 LFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIR-SEVECSISIVNALIDMYIKSSG 296
L G D F++ ++ C+ V+D GR +HG + + + CS + ++++MY K
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAKCRR 71
Query: 297 MDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI--LSGSRPNHVTFSILL 354
MD K+F +M D + WN + G S + G+ F K + +P+ VTF+I+L
Sbjct: 72 MDDCQKMFRQMDSLDPVVWNIVLTGLS--VSCGRETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 355 RQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAV-EMAHSVFDNVSYKNI 413
C +L D G + + G + V ++L+ M+ + G + A++ FD ++ K++
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDV 189
Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC--------CRSENQQ 465
+WN +++G+ N AD ++FC + + E N T V+ C CRS
Sbjct: 190 VSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR-- 247
Query: 466 MVGQIHGAII-KTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSAL 524
QIH ++ ++ + ++C+SL+ Y+ G+++ + D+ SW +++
Sbjct: 248 ---QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 525 VHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
+A +FH+LV G+ PD + +IL CA + K IH ++++ + E
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 584 -VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
V +A+I YA+ GD A AF ++ D+I +N ++ A+A
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSL-MSTKDIISWNAILDAFA 408
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 1/129 (0%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
+R + + + L + L S L Q HG+I++ G DI L+ L+ +Y+KCG
Sbjct: 564 MRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAY 622
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
VF A R+LV +T +V+ +G L +Y M + P+ + +++ C G
Sbjct: 623 SVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAG 682
Query: 160 ASEFGYSIH 168
+ G I+
Sbjct: 683 LIQDGLQIY 691
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 301/580 (51%), Gaps = 13/580 (2%)
Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
Y K ++ A ++F + ++ +N++I GY G+ +A+ + + +DK+T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
AL C D D+G +HGL++ + + + ++N LIDMY K +D A +F+R +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
+D +SWN+L G+ + +L K G +L+ C ++L+ G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC--CINLNEGFIE 269
Query: 370 QCLALHC-----GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY- 423
+ +A+HC G + V ++L+ M+ + G+++ A +F + KN+ T+N ++SG+
Sbjct: 270 KGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 424 ----CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
+ ++ K F ++ G+E + TF V++ C ++ + QIH I K F
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
S +I S+LI+ Y G ++ + + D+ASW +M+ V A +F
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
L + +P+EY + ++++CA A + I + IK G + V ++ I YAK G+
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 600 IKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMS 659
+ A F + N DV Y+ +I + A HG +EA+ IF+ MK ++P+Q F+ V+
Sbjct: 510 MPLANQVFIEVQNP-DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 660 ACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSP 719
AC H GLV +G F+ M + Y + P+ + CLVD+L R G L DA+++I FQ P
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 720 TVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
+R+LLS CR++ + +G+ +E+L+ L P+ ++VLL
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 237/509 (46%), Gaps = 8/509 (1%)
Query: 59 SRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVS 118
S VLG HGH++K ++L NNL+ MY KC G+ ++FD M ERN++S+ ++S
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
Q G ++ ++++++ + ++F + C + G +H + + +
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
F+ +++ Y+K G + A +F D WN++I GY G E LN+++ M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 239 FEGITMDKYTFINALQGCSLVAD---FDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
+G+ + Y + L+ C + + + G IH + +E I + AL+DMY K+
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS-----LFHKFILSGSRPNHVTF 350
+ A K+F M K+V+++N + GF + AS LF G P+ TF
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
S++L+ C L+ G Q+ L F +E + S+LI ++ G+ E F + S
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 421
Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
++I +W ++ + N F ++ S + T ++ C QI
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 471 HGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHN 530
G IK+G + + +S I Y G + + + + D+A++ AM+S+L G
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 531 HEAVTIFHSLVEAGEKPDEYILGTILNSC 559
+EA+ IF S+ G KP++ +L +C
Sbjct: 542 NEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L P + L K+ G Q+H I K F +D F+ + LI +Y+ G G+
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
+ F +++++ SWT ++ +QN + + ++ + ++ P E+ V +M C
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
A G I +A+K I+ V S ++ YAK G++ A +VF + + DV ++AMI
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
A G EALN+ SM GI ++ F+ L C
Sbjct: 534 SLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIAC 570
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 114/285 (40%), Gaps = 43/285 (15%)
Query: 38 SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGW 97
S +R + ++ +S + + G Q+ G+ +K G ++ + I+MY+K G
Sbjct: 453 SHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPL 512
Query: 98 GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
+VF E+ ++ +++ ++S+ Q+G + L ++ MKT+G PN+ A V+ C
Sbjct: 513 ANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCH 572
Query: 158 MGASEFGYS-IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWN 215
G G C RI N +++ + G ++ AE + S D W
Sbjct: 573 GGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWR 632
Query: 216 AMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRS 275
A+ L C + D IG+++ ++
Sbjct: 633 AL-----------------------------------LSSCRVYKDSVIGKRVAERLMEL 657
Query: 276 EVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDV-----ISW 315
E E S S V L ++Y S A +V E M D+ V +SW
Sbjct: 658 EPEASGSYV-LLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 290 bits (741), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 181/638 (28%), Positives = 320/638 (50%), Gaps = 5/638 (0%)
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
NG+ + +K+ M+ +E +++++C A E G ++ AL +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF-EG 241
G + L + + G++ A VF +S ++ WN ++GGYA GY EA+ + ML+ G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+ D YTF L+ C + D G+++H ++R E I +VNALI MY+K + A
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
+F+RM +D+ISWN + G+ EN + LF P+ +T + ++ C L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
D LG + + GF + +V +SL M+ G+ A +F + K+I +W ++S
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
GY +N + T+ + + V+ + T V+ C + ++H IK S
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 482 CGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV 541
+ ++LI Y +D + + + R ++ SW ++++ L EA+ IF +
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQM 490
Query: 542 EAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIK 601
+ +P+ L L +CA IGA K IH V++ G + ++ +A++D Y +CG +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 602 GARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC 661
A F+ DV +N L+ Y+ G S +E+FD+M + ++P + TF+S++ C
Sbjct: 551 TAWSQFNS--QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 662 SHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTV 721
S +V +G + F M+ YG+ P+ Y C+VD+L R G L++A I+ MP P P V
Sbjct: 609 SKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 722 YRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
+ +LL+ CRIH +LGE +++ + L K+ ++LL
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILL 705
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 278/593 (46%), Gaps = 9/593 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
+ +F+A + L E +++ G++V+ + + + L N +AM+ + G VF
Sbjct: 94 EDVFVA-LVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVF 152
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGAS 161
+M+ERNL SW ++V + G FD + +Y M G P+ + V++ C +
Sbjct: 153 GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDL 212
Query: 162 EFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGY 221
G +H ++ E + V +++ Y K GDV +A +F + D+ WNAMI GY
Sbjct: 213 ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGY 272
Query: 222 AHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSI 281
G E L + +M + D T + + C L+ D +GR IH +I + I
Sbjct: 273 FENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDI 332
Query: 282 SIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS 341
S+ N+L MY+ + A K+F RM KD++SW T+ G+ N P + +
Sbjct: 333 SVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 342 GSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMA 401
+P+ +T + +L C L DLD G++L LA+ + V ++LI M+ +C ++ A
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 402 HSVFDNVSYKNITTWNELLSGYCFN--CCDADVLKTFCNIWESGVEVNGCTFFYVVETCC 459
+F N+ KN+ +W +++G N C +A + F + ++ N T + C
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI---FLRQMKMTLQPNAITLTAALAACA 509
Query: 460 RSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGA 519
R +IH +++TG ++ ++L+ YV G+++ ++ N +++ D+ SW
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFN-SQKKDVTSWNI 568
Query: 520 MMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLG 579
+++ +G V +F +V++ +PDE ++L C+ ++ + G
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYG 628
Query: 580 FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMA-YAHHGL 631
+ + V+D + G+++ A + + D V+ L+ A HH +
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKI 681
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 123/302 (40%), Gaps = 52/302 (17%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G ++H H+++ G D FL N L+ MY +CG F+ ++++ SW ++++ +
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSE 575
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VSMGASEFG----YSI------ 167
G+ M ++++ M + P+E S++ C V G F Y +
Sbjct: 576 RGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKH 635
Query: 168 -----------------HCFALKIRIEKNPFVGCSVLN-----FYAKLGDVAAAERVFYS 205
H F K+ + +P V ++LN LG+++A +
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQH--IFE 693
Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
+ VG + + YA CG E V M G+T+D GCS V ++
Sbjct: 694 LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD--------AGCSWV---EVK 742
Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSE 324
++H + + +N +++ + + K+ E + D+ IS + +F G SE
Sbjct: 743 GKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSE 802
Query: 325 NK 326
K
Sbjct: 803 RK 804
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/597 (28%), Positives = 309/597 (51%), Gaps = 6/597 (1%)
Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHC 224
+H L + + ++ + S++N Y D +A VF + I SD V WN+++ GY+
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSD-VYIWNSLMSGYSKN 84
Query: 225 GYGFEALNVVSSMLFEGITM-DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
+ L V +L I + D +TF N ++ + +GR IH L+++S C + +
Sbjct: 85 SMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVV 144
Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
++L+ MY K + + + +VF+ M ++DV SWNT+ F ++ + LF + SG
Sbjct: 145 ASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGF 204
Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
PN V+ ++ + C +LL L+ G ++ + GF +E V S+L+ M+ +C +E+A
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSEN 463
VF + K++ WN ++ GY ++ + G + T ++ C RS N
Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRN 324
Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
IHG +I++ ++ Y+ SLI Y G+ + + + ++ SW M+S+
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTE 583
+ G+ +AV ++ +V G KPD ++L +C+ + A ++ K IH + + T+
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETD 444
Query: 584 VYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMK 643
+ SA++D Y+KCG+ K A F+ S DV+ + +I AY HG EA+ FD+M+
Sbjct: 445 ELLLSALLDMYSKCGNEKEAFRIFN-SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Query: 644 LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYL 703
L+P T ++V+SAC H GL+D+G F M S+YG++P + Y C++D+L R G L
Sbjct: 504 KFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRL 563
Query: 704 EDAKHVIEIMP-FQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLL 759
+A +I+ P + + +L S C +H LG+ + L+ P + + +++L
Sbjct: 564 LEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVL 620
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 214/441 (48%), Gaps = 6/441 (1%)
Query: 18 FHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTN 77
FH T + RL + DSF + I +L LG +H +VK G+
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG------REFLGRMIHTLVVKSGYVC 140
Query: 78 DIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK 137
D+ + ++L+ MY+K F L+VFDEM ER++ SW ++S Q+GE + L+++ M+
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 138 TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA 197
++GF PN ++ + C + E G IH +K E + +V ++++ Y K +
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 198 AAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCS 257
A VF + + WN+MI GY G + +++ M+ EG + T + L CS
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320
Query: 258 LVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNT 317
+ G+ IHG +IRS V I + +LID+Y K + A VF + SWN
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 318 LFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
+ + N + ++ + + G +P+ VTF+ +L C +L L+ G Q+
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
+E + S+L+ M+ +CG + A +F+++ K++ +W ++S Y + + L F
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 438 NIWESGVEVNGCTFFYVVETC 458
+ + G++ +G T V+ C
Sbjct: 501 EMQKFGLKPDGVTLLAVLSAC 521
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 231/540 (42%), Gaps = 31/540 (5%)
Query: 77 NDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM 136
+D+++ N+L++ YSK F L VF + L++ ++ V
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVF-----KRLLNCSICV------------------- 104
Query: 137 KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDV 196
P+ F +V+K ++G G IH +K + V S++ YAK
Sbjct: 105 ------PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLF 158
Query: 197 AAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGC 256
+ +VF + DV WN +I + G +AL + M G + + A+ C
Sbjct: 159 ENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISAC 218
Query: 257 SLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWN 316
S + + G++IH ++ E + +AL+DMY K ++ A +VF++M K +++WN
Sbjct: 219 SRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWN 278
Query: 317 TLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC 376
++ G+ + + ++ I+ G+RP+ T + +L C + +L G + +
Sbjct: 279 SMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS 338
Query: 377 GFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTF 436
+ V SLI ++ +CG +A +VF +WN ++S Y ++ +
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVY 398
Query: 437 CNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
+ GV+ + TF V+ C + + QIH +I ++ + + S+L+ Y
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 497 GQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTIL 556
G +F N + D+ SW M+SA G EA+ F + + G KPD L +L
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVL 518
Query: 557 NSCAAIGAYQR-TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
++C G K K G + S +ID + G + A Q+ ++D
Sbjct: 519 SACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSD 578
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 4/323 (1%)
Query: 50 SLSLSENLKSRVL----GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
SL+++ + SR+L G ++H VK GF D ++ + L+ MY KC VF +M
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
++LV+W ++ + G+ +++ M G P++ + S++ C G
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
IH + ++ + + +V CS+++ Y K G+ AE VF D WN MI Y G
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389
Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
F+A+ V M+ G+ D TF + L CS +A + G+QIH I S +E +++
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
AL+DMY K AF++F + KDV+SW + + + P + F + G +P
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 346 NHVTFSILLRQCGKLLDLDLGLQ 368
+ VT +L CG +D GL+
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLK 532
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
++ D + L L + G Q+H I + D L + L+ MYSKCG
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAF 465
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
R+F+ + ++++VSWT+++SA +G+ L + +M+ G P+ + +V+ C G
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 160 ASEFG 164
+ G
Sbjct: 526 LIDEG 530
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 552 LGTILNSCA-AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
L ++L C + + +R K +H ++ LG +V + ++I+ Y C D AR F+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANL-QPSQATFVSVMSA 660
+DV ++N+L+ Y+ + + + +E+F ++ ++ P TF +V+ A
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKA 116
>sp|Q9SII7|PP159_ARATH Pentatricopeptide repeat-containing protein At2g17210
OS=Arabidopsis thaliana GN=PCMP-E77 PE=2 SV=2
Length = 736
Score = 288 bits (737), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 195/622 (31%), Positives = 327/622 (52%), Gaps = 18/622 (2%)
Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNE-FAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
+ A +G++ + Y +++ G N+ F V K C + G I LK
Sbjct: 18 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGRCIQASLLKRG 77
Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVS 235
E VG S+ +FY K GD+ + R F ++S D WN ++ G G+ E L S
Sbjct: 78 FESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 137
Query: 236 SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV-NALIDMYIKS 294
+ G + T + + C + FD G +IHG +IRS C IS V N+++ MY S
Sbjct: 138 KLRVWGFEPNTSTLVLVIHACRSLW-FD-GEKIHGYVIRSGF-CGISSVQNSILCMYADS 194
Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG-SRPNHVTFSIL 353
+ A K+F+ M+++DVISW+ + + ++K P LF + + + P+ VT + +
Sbjct: 195 DSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 253
Query: 354 LRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKN 412
L+ C + D+D+G + ++ GF L + V +SLI M+ + V+ A VFD + +N
Sbjct: 254 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 313
Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
I +WN +L+G+ N + L+ F + + VEV+ T ++ C E IHG
Sbjct: 314 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 373
Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
II+ G+ S SSLI +Y + +D++ + D+ S M+S L H G + E
Sbjct: 374 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 433
Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIK--LGFNTEVYVASAV 590
A++IF + + P+ + ++LN+C+ + +K H I+ L N ++ V +++
Sbjct: 434 AISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN-DISVGTSI 489
Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
+DAYAKCG I+ AR FDQ ++I + +I AYA +GL +A+ +FD+MK P+
Sbjct: 490 VDAYAKCGAIEMARRTFDQ-ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 548
Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
T+++ +SAC+H GLV KG ++FKSM + +PS Y C+VDMLSR G ++ A +I
Sbjct: 549 AVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHKPSLQHYSCIVDMLSRAGEIDTAVELI 607
Query: 711 EIMP--FQPSPTVYRSLLSGCR 730
+ +P + + + ++LSGCR
Sbjct: 608 KNLPEDVKAGASAWGAILSGCR 629
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 255/545 (46%), Gaps = 11/545 (2%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G + ++K GF + + + N++ Y KCG GLR FD M R+ VSW +IV +
Sbjct: 66 GRCIQASLLKRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLD 125
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
G + GL + ++ GF PN + V+ C S+ G IH + ++ V
Sbjct: 126 YGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSV 183
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
S+L YA D +A ++F +S DV W+ +I Y L + M+ E
Sbjct: 184 QNSILCMYAD-SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAK 242
Query: 243 T-MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS-ISIVNALIDMYIKSSGMDYA 300
T D T + L+ C+++ D D+GR +HG IR + + + + N+LIDMY K +D A
Sbjct: 243 TEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSA 302
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKL 360
F+VF+ ++++SWN++ GF N+ + +FH + + VT LLR C K
Sbjct: 303 FRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC-KF 361
Query: 361 LDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
+ L + + + + G+ E SSLI + C V+ A +V D+++YK++ + + +
Sbjct: 362 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 421
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
+SG + + FC++ ++ N T ++ C S + + HG I+
Sbjct: 422 ISGLAHAGRSDEAISIFCHMRDTP---NAITVISLLNACSVSADLRTSKWAHGIAIRRSL 478
Query: 480 SSCGY-ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH 538
+ + +S++ +Y G ++ + + ++ SW ++SA G +A+ +F
Sbjct: 479 AINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFD 538
Query: 539 SLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCG 598
+ + G P+ L++C G ++ I +++ + S ++D ++ G
Sbjct: 539 EMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAG 598
Query: 599 DIKGA 603
+I A
Sbjct: 599 EIDTA 603
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 195/460 (42%), Gaps = 50/460 (10%)
Query: 315 WNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLAL 374
W + G+SE + G + + F I+ + C KL L G +Q L
Sbjct: 27 WREVVSGYSEIQRAGVQFN------------DPFVFPIVFKACAKLSWLFQGRCIQASLL 74
Query: 375 HCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLK 434
GF +V +S+ + +CG + FD ++ ++ +WN ++ G + + L
Sbjct: 75 KRGFESFVSVGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLW 134
Query: 435 TFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQ-IHGAIIKTGFSSCGYICSSLIKSY 493
F + G E N T V+ C + G+ IHG +I++GF + +S++ Y
Sbjct: 135 WFSKLRVWGFEPNTSTLVLVIHAC---RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMY 191
Query: 494 VNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLV-EAGEKPDEYIL 552
+ L F +ER D+ SW ++ + V + +F +V EA +PD +
Sbjct: 192 ADSDSLSARKLFDEMSER-DVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTV 250
Query: 553 GTILNSCAAIGAYQRTKSIHPFVIKLGFN-TEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
++L +C + +S+H F I+ GF+ +V+V +++ID Y+K D+ A FD++
Sbjct: 251 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 310
Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS--------- 662
N ++ +N+++ + H+ EA+E+F M ++ + T VS++ C
Sbjct: 311 CRN-IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCK 369
Query: 663 --HKGLVDKG-----------------CLLFKSMDSQYGMQPSPDCYGC--LVDMLSRNG 701
H ++ +G C L + D C ++ L+ G
Sbjct: 370 SIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAG 429
Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWA 741
++A + M P+ SLL+ C + + +WA
Sbjct: 430 RSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 469
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 14/207 (6%)
Query: 45 IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFT-NDIFLQNNLIAMYSKCGYFGWGLRVFD 103
I L + S+S +L++ HG ++ NDI + +++ Y+KCG R FD
Sbjct: 451 ISLLNACSVSADLRT---SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFD 507
Query: 104 EMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEF 163
++ E+N++SWT+I+SA NG D L ++ +MK G+ PN + + C G +
Sbjct: 508 QITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKK 567
Query: 164 GYSIHCFALKIRIEKNPFVG--CSVLNFYAKLGDVAAAERVFYSISSD---DVGCWNAMI 218
G I F + + P + +++ ++ G++ A + ++ D W A++
Sbjct: 568 GLMI--FKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAIL 625
Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMD 245
G C F+ L + S ++ E + ++
Sbjct: 626 SG---CRNRFKKLIITSEVVAEVLELE 649
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 287 bits (735), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 304/578 (52%), Gaps = 5/578 (0%)
Query: 187 LNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDK 246
+ F K A ++F ++ + WN ++ + E L S M + D
Sbjct: 1 MGFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRS-EVECSISIVNALIDMYIKSSGMDYAFKVFE 305
+T AL+ C + + + G IHG + + + + + ++LI MYIK M A ++F+
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLD 364
+ D+++W+++ GF +N +P Q F + ++ S P+ VT L+ C KL +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 365 LGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYC 424
LG + + GF ++ ++ +SL+ + + A + A ++F ++ K++ +W+ +++ Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 425 FNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGY 484
N A+ L F ++ + G E N T V++ C + + + + H I+ G +
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 485 ICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFH-SLVEA 543
+ ++L+ Y+ + ++ + R D+ SW A++S G H ++ F L+E
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
+PD ++ +L SC+ +G ++ K H +VIK GF++ ++ +++++ Y++CG + A
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACS 662
F+ D +V+ +LI Y HG ++A+E F+ M K + ++P++ TF+S++SACS
Sbjct: 421 SKVFN-GIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVY 722
H GL+ +G +FK M + Y + P+ + Y LVD+L R G L+ A + + MPF P+P +
Sbjct: 480 HAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQIL 539
Query: 723 RSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+LL CRIH N E+ E ++KL L + ++L+S
Sbjct: 540 GTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMS 577
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/523 (25%), Positives = 258/523 (49%), Gaps = 14/523 (2%)
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
++F EM +R+L W ++ + + +++ L + M + P+ F + +K C +
Sbjct: 15 QMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR 74
Query: 160 ASEFGYSIHCFALK-IRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
+G IH F K + + + +VG S++ Y K G + A R+F + D+ W++M+
Sbjct: 75 EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMV 134
Query: 219 GGYAHCGYGFEALNVVSSMLFEG-ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
G+ G ++A+ M+ +T D+ T I + C+ +++ +GR +HG +IR
Sbjct: 135 SGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGF 194
Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
+S+VN+L++ Y KS A +F+ +A+KDVISW+T+ + +N + +F+
Sbjct: 195 SNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFND 254
Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
+ G+ PN T +L+ C DL+ G + LA+ G E V+++L+ M+ +C +
Sbjct: 255 MMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFS 314
Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC-NIWESGVEVNGCTFFYVVE 456
E A++VF + K++ +W L+SG+ N ++ F + E+ + V+
Sbjct: 315 PEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLG 374
Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
+C + H +IK GF S +I +SL++ Y G L N+ + NG D
Sbjct: 375 SCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVV 434
Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
W ++++ G +A+ F+ +V++ E KP+E +IL++C+ G I +
Sbjct: 435 WTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
Query: 576 I---KLGFNTEVYVASAVIDAYAKCGDIKGA-----RMAFDQS 610
+ +L N E Y + ++D + GD+ A RM F +
Sbjct: 495 VNDYRLAPNLEHY--AVLVDLLGRVGDLDTAIEITKRMPFSPT 535
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/523 (26%), Positives = 240/523 (45%), Gaps = 37/523 (7%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVK-LGFTNDIFLQNNLIAMYSKCGYFGWGL 99
+ D L +L L+ G +HG + K + +D+++ ++LI MY KCG L
Sbjct: 57 KPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEAL 116
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSM 158
R+FDE+ + ++V+W+ +VS +NG ++ + M + P+ + +++ C +
Sbjct: 117 RMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL 176
Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
S G +H F ++ + + S+LN YAK A +F I+ DV W+ +I
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVI 236
Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVE 278
Y G EAL V + M+ +G + T + LQ C+ D + GR+ H L IR +E
Sbjct: 237 ACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 279 CSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
+ + AL+DMY+K + A+ VF R+ KDV+SW L GF+ N ++ F
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 339 IL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA 397
+L + +RP+ + +L C +L L+ + GF + +SL+ ++ RCG+
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGS 416
Query: 398 VEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVE 456
+ A VF+ ++ K+ W L++GY + L+TF ++ +S V+ N TF ++
Sbjct: 417 LGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILS 476
Query: 457 TCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS 516
C H +I G + K VN +L + E
Sbjct: 477 ACS-----------HAGLIHEGL--------RIFKLMVNDYRLAPNLE-----------H 506
Query: 517 WGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
+ ++ L G A+ I + + P ILGT+L +C
Sbjct: 507 YAVLVDLLGRVGDLDTAIEITKRMPFS---PTPQILGTLLGAC 546
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 172/580 (29%), Positives = 290/580 (50%), Gaps = 34/580 (5%)
Query: 214 WNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII 273
+N++I GYA G EA+ + M+ GI+ DKYTF L C+ G QIHGLI+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 274 RSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTAS 333
+ + + N+L+ Y + +D A KVF+ M++++V+SW ++ G++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 334 LFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
LF + + PN VT ++ C KL DL+ G ++ + G + + S+L+ M+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 393 CRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFF 452
+C A+++A +FD N+ N + S Y + L F + +SGV + +
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISML 341
Query: 453 YVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK--------------------- 491
+ +C + N HG +++ GF S IC++LI
Sbjct: 342 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 492 ----------SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL- 540
YV G++D ++E ++ SW ++S LV EA+ +F S+
Sbjct: 402 TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQ 461
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDI 600
+ G D + +I ++C +GA K I+ ++ K G +V + + ++D +++CGD
Sbjct: 462 SQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDP 521
Query: 601 KGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSA 660
+ A F+ S + DV + I A A G A+E+FD M L+P FV ++A
Sbjct: 522 ESAMSIFN-SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 661 CSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPT 720
CSH GLV +G +F SM +G+ P YGC+VD+L R G LE+A +IE MP +P+
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 721 VYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
++ SLL+ CR+ GN E+ +A+EK+ +L P+ ++VLLS
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 249/546 (45%), Gaps = 68/546 (12%)
Query: 53 LSENLKSRVLGT--QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNL 110
LS KSR G Q+HG IVK+G+ D+F+QN+L+ Y++CG +VFDEM+ERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 111 VSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHC 169
VSWT ++ + + ++ M + PN + V+ C + E G ++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 170 FALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFE 229
F IE N + ++++ Y K + A+R+F + ++ NAM Y G E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 230 ALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALID 289
AL V + M+ G+ D+ + ++A+ CS + + G+ HG ++R+ E +I NALID
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 290 MYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKN-----------PGQT------- 331
MY+K D AF++F+RM++K V++WN++ G+ EN P +
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 332 ------ASLFHKFI--------LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
SLF + I G + VT + CG L LDL + G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 378 FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
+ + ++L+ MF RCG E A S+F++++ ++++ W + ++ F
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 438 NIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFG 497
++ E G++ +G F + C HG +++ G I S++K +
Sbjct: 561 DMIEQGLKPDGVAFVGALTACS-----------HGGLVQQGKE----IFYSMLKLH---- 601
Query: 498 QLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
G D+ +G M+ L G EAV + + +P++ I ++L
Sbjct: 602 ----------GVSPEDV-HYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLA 647
Query: 558 SCAAIG 563
+C G
Sbjct: 648 ACRVQG 653
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 143/625 (22%), Positives = 281/625 (44%), Gaps = 42/625 (6%)
Query: 67 HGHIVKLGFTNDIFLQNNLIAMYSKCGY---FGWGLRVFDEMAERNL-VSWTLIVSAAIQ 122
H + K G ND+ L+A + G + VF+ + ++
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
+G + + +++ M +G P+++ + C A G IH +K+ K+ FV
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF-EG 241
S+++FYA+ G++ +A +VF +S +V W +MI GYA + +A+++ M+ E
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+T + T + + C+ + D + G +++ I S +E + +V+AL+DMY+K + +D A
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
++F+ ++ N + + + +F+ + SG RP+ ++ + C +L
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
++ G L GF +N+ ++LI M+ +C + A +FD +S K + TWN +++
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 422 GYCFNC-CDA------------------------------DVLKTFCNIW-ESGVEVNGC 449
GY N DA + ++ FC++ + GV +G
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 450 TFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
T + C + I+ I K G + ++L+ + G +++ N
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTK 569
D+++W A + A+ G+ A+ +F ++E G KPD L +C+ G Q+ K
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 570 SIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGA-RMAFDQSFNSNDVIVYNTLIMAYA 627
I ++KL G + E ++D + G ++ A ++ D NDVI +N+L+ A
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACR 650
Query: 628 HHGLVSEAMEIFDKMKLANLQPSQA 652
G V A +K+++ L P +
Sbjct: 651 VQGNVEMAAYAAEKIQV--LAPERT 673
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 144/292 (49%), Gaps = 6/292 (2%)
Query: 377 GFLDEENVTSSLIYMFCRCGAVE---MAHSVFDNV-SYKNITTWNELLSGYCFNCCDADV 432
G ++ + + L+ C G E A VF+N SY +N L+ GY + +
Sbjct: 59 GLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEA 118
Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKS 492
+ F + SG+ + TF + + C +S + QIHG I+K G++ ++ +SL+
Sbjct: 119 ILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHF 178
Query: 493 YVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE-KPDEYI 551
Y G+LD++ + + ++ SW +M+ + +AV +F +V E P+
Sbjct: 179 YAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVT 238
Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSF 611
+ ++++CA + + + ++ F+ G + SA++D Y KC I A+ FD+ +
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE-Y 297
Query: 612 NSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
++++ + N + Y GL EA+ +F+ M + ++P + + +S +S+CS
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 173/425 (40%), Gaps = 36/425 (8%)
Query: 33 QFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC 92
+ D + + + + +S L+ G +V+ I G + + + L+ MY KC
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC 284
Query: 93 GYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVM 152
R+FDE NL + S ++ G L ++ M +G P+ ++ S +
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 153 KVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVG 212
C + +G S H + L+ E + ++++ Y K A R+F +S+ V
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 213 CWNAMIGGYAHCG------YGFEAL---NVVS----------SMLF-------------E 240
WN+++ GY G FE + N+VS LF E
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
G+ D T ++ C + D+ + I+ I ++ ++ + + L+DM+ + + A
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQC--G 358
+F + ++DV +W G + N + LF I G +P+ V F L C G
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK-NITTWN 417
L+ + L LH G E+ ++ + R G +E A + +++ + N WN
Sbjct: 585 GLVQQGKEIFYSMLKLH-GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 418 ELLSG 422
LL+
Sbjct: 644 SLLAA 648
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
L ++ +I K G D+ L L+ M+S+CG + +F+ + R++ +WT + A
Sbjct: 488 LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 122 QNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR--IEKN 179
G + ++++ DM G P+ A + C G + G I LK+ ++
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 180 PFVGCSVLNFYAKLGDVAAAERVF--YSISSDDVGCWNAMI------GGYAHCGYGFEAL 231
GC V + + G + A ++ + +DV WN+++ G Y E +
Sbjct: 608 VHYGCMV-DLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 232 NVVS 235
V++
Sbjct: 666 QVLA 669
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 191/713 (26%), Positives = 346/713 (48%), Gaps = 17/713 (2%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G ++H I ++G +D+++ L+ MY K +VFD+M +++V+W +VS Q
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
NG L ++ DM++ + ++ +++ + S+ +H +K F+
Sbjct: 179 NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIK-----KGFI 233
Query: 183 ---GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
+++ Y D+ AAE VF + D W M+ YAH G+ E L + M
Sbjct: 234 FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRN 293
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
+ M+K +ALQ + V D G IH ++ + +S+ +L+ MY K ++
Sbjct: 294 YDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEI 353
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
A ++F + D+DV+SW+ + + + + SLF + +PN VT + +L+ C
Sbjct: 354 AEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAG 413
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
+ LG + C A+ E +++I M+ +CG A F+ + K+ +N L
Sbjct: 414 VAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNAL 473
Query: 420 LSGYCFNCCDAD-VLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
GY DA+ + N+ GV + T +++TC + ++G IIK G
Sbjct: 474 AQGYT-QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 479 FSSCGYICSSLIKSYVNFGQLDNSFEFSN--GAERLDMASWGAMMSALVHQGHNHEAVTI 536
F S ++ +LI + L + + G E+ SW MM+ + G EAV
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEK-STVSWNIMMNGYLLHGQAEEAVAT 591
Query: 537 FHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
F + +P+ I+ + A + A + S+H +I+ GF ++ V ++++D YAK
Sbjct: 592 FRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAK 651
Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
CG I+ + F + N ++ +NT++ AYA HGL S A+ +F M+ L+P +F+S
Sbjct: 652 CGMIESSEKCFIEISNKY-IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLS 710
Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
V+SAC H GLV++G +F+ M ++ ++ + Y C+VD+L + G +A ++ M +
Sbjct: 711 VLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770
Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLSKRKRQREGN 769
S V+ +LL+ R+H N L A +L+ L P N + + S+ +R E N
Sbjct: 771 TSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY---SQDRRLGEVN 820
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 207/399 (51%), Gaps = 1/399 (0%)
Query: 61 VLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAA 120
V G +H + V+ G D+ + +L++MYSKCG ++F + +R++VSW+ ++++
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 121 IQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
Q G+ D + ++ DM PN + SV++ C + AS G SIHC+A+K IE
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL 436
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
+V++ YAK G + A + F + D +NA+ GY G +A +V +M
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
G+ D T + LQ C+ +D+ G ++G II+ + + +ALI+M+ K + A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 301 FKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
+F++ +K +SWN + G+ + + + F + + +PN VTF ++R +
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
L L +G+ + + CGF + V +SL+ M+ +CG +E + F +S K I +WN +
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTM 676
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
LS Y + + + F ++ E+ ++ + +F V+ C
Sbjct: 677 LSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSAC 715
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 163/671 (24%), Positives = 300/671 (44%), Gaps = 11/671 (1%)
Query: 65 QVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNG 124
QVHG ++ G N LI YS +FD + + +V W ++ + G
Sbjct: 23 QVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 125 EFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVG 183
L + M + G P++++ +K C + G IH ++ +E + ++G
Sbjct: 79 LHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIG 138
Query: 184 CSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
+++ Y K D+ +A +VF + DV WN M+ G A G AL + M +
Sbjct: 139 TALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVD 198
Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
+D + N + S + D+ R +HGL+I+ + S + LIDMY + + A V
Sbjct: 199 IDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDMYCNCADLYAAESV 256
Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDL 363
FE + KD SW T+ ++ N + LF R N V + L+ + DL
Sbjct: 257 FEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDL 316
Query: 364 DLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
G+ + A+ G + + +V +SL+ M+ +CG +E+A +F N+ +++ +W+ +++ Y
Sbjct: 317 VKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASY 376
Query: 424 CFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG 483
+ + F ++ ++ N T V++ C ++ IH IK S
Sbjct: 377 EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESEL 436
Query: 484 YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEA 543
+++I Y G+ + + D ++ A+ G ++A ++ ++
Sbjct: 437 ETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 544 GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGA 603
G PD + +L +CA Y R ++ +IK GF++E +VA A+I+ + KC + A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 604 RMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
+ FD+ + +N ++ Y HG EA+ F +MK+ QP+ TFV+++ A +
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDA-KHVIEIMPFQPSPTVY 722
+ G + S+ Q G LVDM ++ G +E + K IEI +
Sbjct: 617 LSALRVGMSVHSSL-IQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS--NKYIVSW 673
Query: 723 RSLLSGCRIHG 733
++LS HG
Sbjct: 674 NTMLSAYAAHG 684
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%)
Query: 54 SENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSW 113
+ L + +G VH +++ GF + + N+L+ MY+KCG + F E++ + +VSW
Sbjct: 614 AAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSW 673
Query: 114 TLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
++SA +G + +++ M+ N P+ + SV+ C G E G I
Sbjct: 674 NTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 281 bits (719), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/582 (28%), Positives = 291/582 (50%), Gaps = 7/582 (1%)
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG 241
+ +++ Y G A VF I D W M+ Y E + + ++ G
Sbjct: 78 IATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHG 137
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
D F AL+ C+ + D D G++IH +++ ++ ++ L+DMY K + A
Sbjct: 138 FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAH 196
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
KVF + ++V+ W ++ G+ +N + LF++ + N T+ L+ C KL
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
L G + G + +SL+ M+ +CG + A VF+ S+ ++ W ++
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSS 481
GY N + L F + ++ N T V+ C EN ++ +HG IK G
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD 376
Query: 482 CGYICSSLIKSYVN-FGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSL 540
+ ++L+ Y + D + F +E+ D+ +W +++S G HEA+ +FH +
Sbjct: 377 TN-VANALVHMYAKCYQNRDAKYVFEMESEK-DIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 541 VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF--NTEVYVASAVIDAYAKCG 598
P+ + ++ ++CA++G+ S+H + +KLGF ++ V+V +A++D YAKCG
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCG 494
Query: 599 DIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
D + AR+ FD + + I ++ +I Y G ++E+F++M +P+++TF S++
Sbjct: 495 DPQSARLIFD-TIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 553
Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
SAC H G+V++G F SM Y PS Y C+VDML+R G LE A +IE MP QP
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 613
Query: 719 PTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+ + L GC +H +LGE +K+L L P + + +VL+S
Sbjct: 614 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVS 655
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 176/708 (24%), Positives = 311/708 (43%), Gaps = 50/708 (7%)
Query: 10 FADKPSCHFHATRKRIHRLCGNNQFCSDSFLRKDPIFLAKSLSLSENLKSRVLGTQVHGH 69
F P C T K + L N S + P FL LS N+ S Q HG
Sbjct: 13 FGFPPRCVSFTTIKEL-ILTEENDGSSLHYAASSPCFLL--LSKCTNIDSL---RQSHGV 66
Query: 70 IVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMG 129
+ G DI + L+++Y GY VFD++ E + W +++ N E
Sbjct: 67 LTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEV 126
Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNF 189
+K+Y + +GF ++ +K C + + G IHC +K+ N V +L+
Sbjct: 127 VKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDM 185
Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTF 249
YAK G++ +A +VF I+ +V CW +MI GY E L + + M + ++YT+
Sbjct: 186 YAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 250 INALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMAD 309
+ C+ ++ G+ HG +++S +E S +V +L+DMY+K + A +VF +
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 310 KDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL 369
D++ W + G++ N + + SLF K +PN VT + +L CG + +L+LG +
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 370 QCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCD 429
L++ G D NV ++L++M+ +C A VF+ S K+I WN ++SG+ N
Sbjct: 366 HGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSI 424
Query: 430 ADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF--SSCGYICS 487
+ L F + V NG T + C + + +H +K GF SS ++ +
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 488 SLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKP 547
+L+ Y G ++ + E + +W AM+ QG ++ +F +++ +KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIK-LGFNTEVYVASAVIDAYAKCGDIKGARMA 606
+E +IL++C G K + K F + ++D A+ G+++
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELE----- 599
Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGL 666
+A++I +KM +QP F + + C
Sbjct: 600 ---------------------------QALDIIEKMP---IQPDVRCFGAFLHGCGMHSR 629
Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLV-DMLSRNGYLEDAKHVIEIM 713
D G ++ K M + P Y LV ++ + +G AK V +M
Sbjct: 630 FDLGEIVIKKM---LDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLM 674
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 280 bits (717), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/663 (28%), Positives = 311/663 (46%), Gaps = 66/663 (9%)
Query: 186 VLNFYAKLGDVAAAERVFYSISSDDVGC--WNAMIGGYAHCGYGFEALNVVSSMLFEGIT 243
+++ Y +G ++ A + D G WN++I Y G + L + M T
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 244 MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKV 303
D YTF + C ++ G H L + + ++ + NAL+ MY + + A KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 304 FERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILS-GSRPNHVTFSILLRQCGKLLD 362
F+ M+ DV+SWN++ +++ P +F + G RP+++T +L C L
Sbjct: 185 FDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGT 244
Query: 363 LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSG 422
LG QL C A+ + V + L+ M+ +CG ++ A++VF N+S K++ +WN +++G
Sbjct: 245 HSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAG 304
Query: 423 YC-----------FNCCDADVLKTFCNIWE------------------------SGVEVN 447
Y F + +K W SG++ N
Sbjct: 305 YSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Query: 448 GCTFFYVVETCCRSENQQMVGQIHGAIIK-------TGFSSCGYICSSLIKSYVNFGQLD 500
T V+ C +IH IK G + + LI Y ++D
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 501 NS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAG--EKPDEYILGTI 555
+ F+ + ER D+ +W M+ G ++A+ + + E +P+ + +
Sbjct: 425 TARAMFDSLSPKER-DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNT-EVYVASAVIDAYAKCGDIKGARMAFDQSFNSN 614
L +CA++ A + K IH + ++ N ++V++ +ID YAKCG I AR+ FD N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 615 DVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLF 674
+V + +L+ Y HG EA+ IFD+M+ + T + V+ ACSH G++D+G F
Sbjct: 544 EV-TWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYF 602
Query: 675 KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGN 734
M + +G+ P P+ Y CLVD+L R G L A +IE MP +P P V+ + LS CRIHG
Sbjct: 603 NRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Query: 735 KELGEWASEKLLLLLPKNDAAHVLLSK--------RKRQREGNLLDHEGV-----CNVND 781
ELGE+A+EK+ L +D ++ LLS + R +L+ H+GV C+ +
Sbjct: 663 VELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Query: 782 GIK 784
GIK
Sbjct: 723 GIK 725
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 219/451 (48%), Gaps = 56/451 (12%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G H + GF +++F+ N L+AMYS+C +VFDEM+ ++VSW I+ + +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 123 NGEFDMGLKMYVDMKTN-GFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
G+ + L+M+ M G P+ + +V+ C S+G G +HCFA+ + +N F
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM------------------------ 217
VG +++ YAK G + A VF ++S DV WNAM
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 218 -----------IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGR 266
I GYA G G+EAL V ML GI ++ T I+ L GC+ V G+
Sbjct: 326 IKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGK 385
Query: 267 QIHGLIIRSEVECSIS-------IVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNT 317
+IH I+ ++ + ++N LIDMY K +D A +F+ ++ ++DV++W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 318 LFGGFSENKNPGQTASLFHKFILSG--SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALH 375
+ GG+S++ + + L + +RPN T S L C L L +G Q+ AL
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 376 CGFLDEEN-----VTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDA 430
+++N V++ LI M+ +CG++ A VFDN+ KN TW L++GY +
Sbjct: 506 ----NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGE 561
Query: 431 DVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
+ L F + G +++G T V+ C S
Sbjct: 562 EALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Score = 164 bits (414), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 162/684 (23%), Positives = 287/684 (41%), Gaps = 72/684 (10%)
Query: 66 VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWG---LRVFDEMAERNLVSWTLIVSAAIQ 122
+H ++ G + L ++LI+ Y G LR F ++ + W ++ +
Sbjct: 47 IHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPP-SDAGVYHWNSLIRSYGD 104
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
NG + L ++ M + + P+ + V K C + + G S H +L N FV
Sbjct: 105 NGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFV 164
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE-G 241
G +++ Y++ ++ A +VF +S DV WN++I YA G AL + S M E G
Sbjct: 165 GNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFG 224
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
D T +N L C+ + +G+Q+H + SE+ ++ + N L+DMY K MD A
Sbjct: 225 CRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEAN 284
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK------------------------ 337
VF M+ KDV+SWN + G+S+ LF K
Sbjct: 285 TVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRG 344
Query: 338 -----------FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHC-------GFL 379
+ SG +PN VT +L C + L G ++ C A+ G
Sbjct: 345 LGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHG 404
Query: 380 DEENVTSSLIYMFCRCGAVEMAHSVFDNVSYK--NITTWNELLSGYCFNCCDADVLKTFC 437
DE V + LI M+ +C V+ A ++FD++S K ++ TW ++ GY + L+
Sbjct: 405 DENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLS 464
Query: 438 NIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCG-YICSSLIKSYV 494
++E + N T + C ++ QIH ++ ++ ++ + LI Y
Sbjct: 465 EMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYA 524
Query: 495 NFGQL-DNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILG 553
G + D F N + + +W ++M+ G+ EA+ IF + G K D L
Sbjct: 525 KCGSISDARLVFDNMMAK-NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLL 583
Query: 554 TILNSCAAIGA-------YQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
+L +C+ G + R K++ F + G E Y + ++D + G + A
Sbjct: 584 VVLYACSHSGMIDQGMEYFNRMKTV--FGVSPG--PEHY--ACLVDLLGRAGRLNAALRL 637
Query: 607 FDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKM-KLANLQPSQATFVSVMSACSHKG 665
++ +V+ + HG V +K+ +LA+ T +S + A + +
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRW 697
Query: 666 LVDKGCLLFKSMDSQYGMQPSPDC 689
K +S+ G++ P C
Sbjct: 698 ---KDVTRIRSLMRHKGVKKRPGC 718
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 171/375 (45%), Gaps = 47/375 (12%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
R D I L L +L + LG Q+H V ++F+ N L+ MY+KCG
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANT 285
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMK----------------------- 137
VF M+ +++VSW +V+ Q G F+ ++++ M+
Sbjct: 286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGL 345
Query: 138 ------------TNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALK--IRIEKN---- 179
++G PNE + SV+ C S+GA G IHC+A+K I + KN
Sbjct: 346 GYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 180 -PFVGCSVLNFYAKLGDVAAAERVFYSISSD--DVGCWNAMIGGYAHCGYGFEALNVVSS 236
V +++ YAK V A +F S+S DV W MIGGY+ G +AL ++S
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSE 465
Query: 237 MLFEGITM--DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC-SISIVNALIDMYIK 293
M E + +T AL C+ +A IG+QIH +R++ + + N LIDMY K
Sbjct: 466 MFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAK 525
Query: 294 SSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSIL 353
+ A VF+ M K+ ++W +L G+ + + +F + G + + VT ++
Sbjct: 526 CGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVV 585
Query: 354 LRQCGKLLDLDLGLQ 368
L C +D G++
Sbjct: 586 LYACSHSGMIDQGME 600
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 14/292 (4%)
Query: 38 SFLRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKL-------GFTNDIFLQNNLIAMYS 90
S ++ + + L LS ++ + + G ++H + +K G ++ + N LI MY+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 91 KCGYFGWGLRVFDEMA--ERNLVSWTLIVSAAIQNGEFDMGLKMYVDM--KTNGFMPNEF 146
KC +FD ++ ER++V+WT+++ Q+G+ + L++ +M + PN F
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 147 AVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP-FVGCSVLNFYAKLGDVAAAERVFYS 205
+ + C S+ A G IH +AL+ + P FV +++ YAK G ++ A VF +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 206 ISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIG 265
+ + + W +++ GY GYG EAL + M G +D T + L CS D G
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Query: 266 RQ-IHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISW 315
+ + + V L+D+ ++ ++ A ++ E M + + W
Sbjct: 599 MEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 277/523 (52%), Gaps = 5/523 (0%)
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
I + ++ L+ C+ D G Q+H +++S ++ N LIDMY K A+
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLL 361
KVF+ M +++V+SW+ L G N + + SLF + G PN TFS L+ CG L
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 362 DLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLS 421
L+ GLQ+ L GF V +SL+ M+ +CG + A VF + +++ +WN +++
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 422 GYCFNCCDADVLKTFCNIWESGVEVNGCTF-FYVVETCCRSENQQMVG-QIHGAIIKTGF 479
G+ + L TF + E+ ++ F + C S G QIHG ++++GF
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 480 --SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
S I SL+ YV G L ++ + + + M SW +++ +G EA+ +F
Sbjct: 242 HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLF 301
Query: 538 HSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKC 597
L E + D + L +I+ A ++ K + +KL E V ++V+D Y KC
Sbjct: 302 KRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC 361
Query: 598 GDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSV 657
G + A F + DVI + +I Y HGL +++ IF +M N++P + +++V
Sbjct: 362 GLVDEAEKCFAE-MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAV 420
Query: 658 MSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQP 717
+SACSH G++ +G LF + +G++P + Y C+VD+L R G L++AKH+I+ MP +P
Sbjct: 421 LSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP 480
Query: 718 SPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+ ++++LLS CR+HG+ ELG+ + LL + KN A +V++S
Sbjct: 481 NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 523
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 207/403 (51%), Gaps = 4/403 (0%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G QVH +++K G ++ N LI MY KC +VFD M ERN+VSW+ ++S +
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
NG+ L ++ +M G PNEF + +K C + A E G IH F LKI E V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
G S+++ Y+K G + AE+VF I + WNAMI G+ H GYG +AL+ M I
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 243 T--MDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC--SISIVNALIDMYIKSSGMD 298
D++T + L+ CS G+QIHG ++RS C S +I +L+D+Y+K +
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
A K F+++ +K +ISW++L G+++ + LF + S+ + S ++
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
L G Q+Q LA+ E +V +S++ M+ +CG V+ A F + K++ +W
Sbjct: 325 DFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTV 384
Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
+++GY + ++ F + +E + + V+ C S
Sbjct: 385 VITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 234/508 (46%), Gaps = 14/508 (2%)
Query: 141 FMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAA 199
+PN+ + S+++VC G S+ G +HC+ LK N +++ Y K + A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 200 ERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLV 259
+VF S+ +V W+A++ G+ G +L++ S M +GI +++TF L+ C L+
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 260 ADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLF 319
+ G QIHG ++ E + + N+L+DMY K ++ A KVF R+ D+ +ISWN +
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 320 GGFSENKNPGQTASLFHKFILSG--SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCG 377
GF + F + RP+ T + LL+ C + G Q+ + G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 378 F--LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKT 435
F +T SL+ ++ +CG + A FD + K + +W+ L+ GY + +
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 436 FCNIWESGVEVNGCTFFYVV----ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIK 491
F + E +++ ++ + + +QM Q + +G + + +S++
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM--QALAVKLPSGLETS--VLNSVVD 356
Query: 492 SYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYI 551
Y+ G +D + + + D+ SW +++ G ++V IF+ ++ +PDE
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVC 416
Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAYAKCGDIKGARMAFDQS 610
+L++C+ G + + + +++ G V + V+D + G +K A+ D
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 611 FNSNDVIVYNTLIMAYAHHGLVSEAMEI 638
+V ++ TL+ HG + E+
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEV 504
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G Q+ VKL + + N+++ MY KCG + F EM ++++SWT++++ +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC-----VSMGASEFGYSIHCFALKIRIE 177
+G ++++ +M + P+E +V+ C + G F + +K R+E
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 178 KNPFVGCSVLNFYAKLGDVAAAERVFYSIS-SDDVGCWNAMI 218
C V++ + G + A+ + ++ +VG W ++
Sbjct: 452 ---HYAC-VVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 279 bits (714), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 293/577 (50%), Gaps = 7/577 (1%)
Query: 190 YAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI--TMDKY 247
YA G + A ++F + + +N +I Y G +A++V M+ EG+ D Y
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 248 TFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERM 307
T+ + + +G +HG I+RS + NAL+ MY+ ++ A VF+ M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 308 ADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGL 367
++DVISWNT+ G+ N +F + +H T +L CG L DL++G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 368 QLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNC 427
+ L D+ V ++L+ M+ +CG ++ A VFD + +++ TW +++GY +
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 428 CDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYIC 486
D + C + + GV N T +V C + +HG ++ S I
Sbjct: 299 -DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 487 SSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK 546
+SLI Y ++D F +GA + W A+++ V +A+ +F + +
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 547 PDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMA 606
P+ L ++L + AA+ ++ +IH ++ K GF + + A+ ++ Y+KCG ++ A
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 607 FD---QSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
F+ + S DV+++ LI Y HG A+++F +M + + P++ TF S ++ACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 664 KGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYR 723
GLV++G LF+ M Y + Y C+VD+L R G L++A ++I +PF+P+ TV+
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597
Query: 724 SLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
+LL+ C H N +LGE A+ KL L P+N +VLL+
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLA 634
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/572 (26%), Positives = 271/572 (47%), Gaps = 24/572 (4%)
Query: 48 AKSLSLSENLKSRVL-GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMA 106
+S+S ++ L V+ G +V GHI+ + L Y+ CG+ + ++F+EM
Sbjct: 28 TQSISKTKALHCHVITGGRVSGHIL-----------STLSVTYALCGHITYARKLFEEMP 76
Query: 107 ERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF--MPNEFAVGSVMKVCVSMGASEFG 164
+ +L+S+ +++ ++ G + + +++ M + G +P+ + V K + + + G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
+H L+ ++ +V ++L Y G V A VF + + DV WN MI GY
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
GY +AL + M+ E + +D T ++ L C + D ++GR +H L+ + I +
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
NAL++MY+K MD A VF+RM +DVI+W + G++E+ + L G R
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
PN VT + L+ CG L ++ G L A+ + + +SLI M+ +C V++ V
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQ 464
F S + W+ +++G N +D L F + VE N T ++ +
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 465 QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAER----LDMASWGAM 520
+ IH + KTGF S + L+ Y G L+++ + NG + D+ WGA+
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 521 MSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGF 580
+S G H A+ +F +V +G P+E + LN+C+ G + ++ F++
Sbjct: 497 ISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFML---- 552
Query: 581 NTEVYVASAVIDAYAKCGDIKGARMAFDQSFN 612
E Y A + Y D+ G D+++N
Sbjct: 553 --EHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/547 (26%), Positives = 240/547 (43%), Gaps = 16/547 (2%)
Query: 46 FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
F+AK+ + LKS LG VHG I++ F D ++QN L+AMY G VFD M
Sbjct: 122 FVAKA---AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
R+++SW ++S +NG + L M+ M + + S++ VC + E G
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCG 225
++H + R+ V +++N Y K G + A VF + DV W MI GY G
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 226 YGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVN 285
AL + M FEG+ + T + + C + G+ +HG +R +V I I
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 286 ALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP 345
+LI MY K +D F+VF + W+ + G +N+ LF + P
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 346 NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVF 405
N T + LL L DL + + C GF+ + + L++++ +CG +E AH +F
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 406 DNVS----YKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS 461
+ + K++ W L+SGY + + L+ F + SGV N TF + C S
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 462 ---ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-W 517
E + + KT S Y C ++ G+LD ++ ++ W
Sbjct: 539 GLVEEGLTLFRFMLEHYKTLARSNHYTC--IVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 518 GAMMSALVHQGHNHEAVTIFHSLVE-AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVI 576
GA+++A V + + L E E Y+L + N AA+G ++ + + +
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVL--LANIYAALGRWKDMEKVRSMME 654
Query: 577 KLGFNTE 583
+G +
Sbjct: 655 NVGLRKK 661
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 178/386 (46%), Gaps = 6/386 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D + L + +LK +G VH + + + I ++N L+ MY KCG VF
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
D M R++++WT +++ ++G+ + L++ M+ G PN + S++ VC
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
G +H +A++ ++ + + S+++ YAK V RVF S G W+A+I G
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
+AL + M E + + T + L + +AD IH + ++ S+
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 283 IVNALIDMYIKSSGMDYAFKVF----ERMADKDVISWNTLFGGFSENKNPGQTASLFHKF 338
L+ +Y K ++ A K+F E+ KDV+ W L G+ + + +F +
Sbjct: 457 AATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEM 516
Query: 339 ILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCLALHCGFLDEENVTSSLIYMFCRCGA 397
+ SG PN +TF+ L C ++ GL L + + H L N + ++ + R G
Sbjct: 517 VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGR 576
Query: 398 VEMAHSVFDNVSYKNITT-WNELLSG 422
++ A+++ + ++ +T W LL+
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAA 602
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Query: 554 TILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNS 613
++LN AA + +TK++H VI G ++ S + YA CG I AR F++ S
Sbjct: 20 SLLNHFAATQSISKTKALHCHVIT-GGRVSGHILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 614 NDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ--PSQATFVSVMSACSHKGLVDKGC 671
+ ++ YN +I Y GL +A+ +F +M ++ P T+ V A + G
Sbjct: 79 S-LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 672 LLF-KSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIM 713
++ + + S +G L+ M G +E A+ V ++M
Sbjct: 138 VVHGRILRSWFGRDKY--VQNALLAMYMNFGKVEMARDVFDVM 178
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 300/564 (53%), Gaps = 9/564 (1%)
Query: 199 AERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSL 258
A ++F ++ D WN MI G+ CG EA+ S M+F G+ D +T+ ++ +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 259 VADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTL 318
++ + G++IH ++I+ + + N+LI +Y+K A KVFE M ++D++SWN++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 319 FGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF 378
G+ + + LF + + G +P+ + L C + +G ++ C A+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 379 -LDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFC 437
+ V +S++ M+ + G V A +F+ + +NI WN ++ Y N D F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 438 NIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNF 496
+ E +G++ + T ++ E + IHG ++ GF + ++LI Y
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILEGRT----IHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 497 GQLDNS-FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTI 555
GQL ++ F AE+ ++ SW ++++A V G N+ A+ +F L ++ PD + +I
Sbjct: 379 GQLKSAEVIFDRMAEK-NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASI 437
Query: 556 LNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSND 615
L + A + + IH +++K + + + ++++ YA CGD++ AR F+ D
Sbjct: 438 LPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL-LKD 496
Query: 616 VIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFK 675
V+ +N++IMAYA HG ++ +F +M + + P+++TF S+++ACS G+VD+G F+
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556
Query: 676 SMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNK 735
SM +YG+ P + YGC++D++ R G AK +E MPF P+ ++ SLL+ R H +
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDI 616
Query: 736 ELGEWASEKLLLLLPKNDAAHVLL 759
+ E+A+E++ + N +VLL
Sbjct: 617 TIAEFAAEQIFKMEHDNTGCYVLL 640
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 9/415 (2%)
Query: 46 FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
F+ KS++ +L+ G ++H ++KLGF +D+++ N+LI++Y K G +VF+EM
Sbjct: 135 FVIKSVAGISSLEE---GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
ER++VSW ++S + G+ L ++ +M GF P+ F+ S + C + + + G
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 166 SIHCFALKIRIEK-NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
IHC A++ RIE + V S+L+ Y+K G+V+ AER+F + ++ WN MIG YA
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 225 GYGFEALNVVSSMLFE-GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISI 283
G +A M + G+ D T IN L +++ GR IHG +R + +
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVL 367
Query: 284 VNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS 343
ALIDMY + + A +F+RMA+K+VISWN++ + +N LF + S
Sbjct: 368 ETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSL 427
Query: 344 RPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHS 403
P+ T + +L + L L G ++ + + + +SL++M+ CG +E A
Sbjct: 428 VPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARK 487
Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETC 458
F+++ K++ +WN ++ Y + + F + S V N TF ++ C
Sbjct: 488 CFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 233/468 (49%), Gaps = 6/468 (1%)
Query: 98 GLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
L++FDEM + + W +++ G + ++ Y M G + F V+K
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
+ + E G IH +K+ + +V S+++ Y KLG AE+VF + D+ WN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
I GY G GF +L + ML G D+++ ++AL CS V +G++IH +RS +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 278 EC-SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFH 336
E + ++ +++DMY K + YA ++F M +++++WN + G ++ N F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 337 KFI-LSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
K +G +P+ +T SI L +L+ G + A+ GFL + ++LI M+ C
Sbjct: 323 KMSEQNGLQPDVIT-SINLLPASAILE---GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
G ++ A +FD ++ KN+ +WN +++ Y N + L+ F +W+S + + T ++
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
S + +IH I+K+ + S I +SL+ Y G L+++ + N D+
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
SW +++ A G +V +F ++ + P++ ++L +C+ G
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISG 546
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 209/453 (46%), Gaps = 11/453 (2%)
Query: 291 YIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF 350
+ S M+ A ++F+ M D WN + GF+ + + + + +G + + T+
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 351 SILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY 410
+++ + L+ G ++ + + GF+ + V +SLI ++ + G A VF+ +
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 411 KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQI 470
++I +WN ++SGY L F + + G + + + + C + +M +I
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
Query: 471 HGAIIKTGFSSCG-YICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGH 529
H +++ + + +S++ Y +G++ + NG + ++ +W M+ G
Sbjct: 254 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGR 313
Query: 530 NHEAVTIFHSLVEA-GEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVAS 588
+A F + E G +PD +L + A + ++IH + ++ GF + + +
Sbjct: 314 VTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG----RTIHGYAMRRGFLPHMVLET 369
Query: 589 AVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQ 648
A+ID Y +CG +K A + FD+ N VI +N++I AY +G A+E+F ++ ++L
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKN-VISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428
Query: 649 PSQATFVSVMSACSHKGLVDKGCLLFKSM-DSQYGMQPSPDCYGCLVDMLSRNGYLEDAK 707
P T S++ A + + +G + + S+Y + LV M + G LEDA+
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRY--WSNTIILNSLVHMYAMCGDLEDAR 486
Query: 708 HVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
+ + + + S++ +HG + W
Sbjct: 487 KCFNHILLKDVVS-WNSIIMAYAVHGFGRISVW 518
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G +HG+ ++ GF + L+ LI MY +CG +FD MAE+N++SW I++A +Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 123 NGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFV 182
NG+ L+++ ++ + +P+ + S++ + G IH + +K R N +
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 183 GCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGI 242
S+++ YA GD+ A + F I DV WN++I YA G+G ++ + S M+ +
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 243 TMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE-VECSISIVNALIDMYIKSSGMDYAF 301
+K TF + L CS+ D G + + R ++ I ++D+ ++ A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 302 KVFERM 307
+ E M
Sbjct: 589 RFLEEM 594
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 20/225 (8%)
Query: 458 CCRSENQQMVGQIHGAI---IKTGFSSCGYIC----------------SSLIKSYVNFGQ 498
C SEN Q G+ +G +G S + + ++ + +
Sbjct: 20 CVSSENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRL 79
Query: 499 LDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
++++ + + + D W M+ G EAV + +V AG K D + ++ S
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 559 CAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIV 618
A I + + K IH VIKLGF ++VYV +++I Y K G A F++ D++
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE-MPERDIVS 198
Query: 619 YNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSH 663
+N++I Y G ++ +F +M +P + + +S + ACSH
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 45/215 (20%)
Query: 48 AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
A+SLSLSE G ++H +IVK + ++ + N+L+ MY+ CG + F+ +
Sbjct: 442 AESLSLSE-------GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSI 167
+++VSW I+ A +G + + ++ +M + PN+ S++ C G + G+
Sbjct: 495 KDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEY 554
Query: 168 H-----------------CF-----------ALKIRIEKNPFVGC-----SVLNFYAKLG 194
C A K +E+ PFV S+LN
Sbjct: 555 FESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHK 614
Query: 195 DVA----AAERVFYSISSDDVGCWNAMIGGYAHCG 225
D+ AAE++F + D+ GC+ ++ YA G
Sbjct: 615 DITIAEFAAEQIF-KMEHDNTGCYVLLLNMYAEAG 648
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 278 bits (712), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 185/725 (25%), Positives = 362/725 (49%), Gaps = 23/725 (3%)
Query: 47 LAKSLSLSENLKSRVLGTQVHGHIVKLG-FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
+ + + L + S L +Q+H H++ G D LI Y+ G VF+
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE--- 162
+ + +++ + D + +Y + + ++F SV++ C G+ E
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLS 118
Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
G +H +K ++ + + S+L Y + G+++ AE+VF + D+ W+ ++
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSIS 282
G +AL + M+ +G+ D T I+ ++GC+ + I R +HG I R + +
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 283 IVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSG 342
+ N+L+ MY K + + ++FE++A K+ +SW + ++ + + F + I SG
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 343 SRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-----LDE--ENVTSSLIYMFCRC 395
PN VT +L CG +GL + ++H GF LD E+++ +L+ ++ C
Sbjct: 299 IEPNLVTLYSVLSSCGL-----IGLIREGKSVH-GFAVRRELDPNYESLSLALVELYAEC 352
Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVV 455
G + +V VS +NI WN L+S Y L F + ++ + T +
Sbjct: 353 GKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 456 ETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMA 515
C + + QIHG +I+T S ++ +SLI Y G +D++ N + +
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVV 471
Query: 516 SWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFV 575
+W +M+ G++ EA+++F + + + +E ++ +C++IG+ ++ K +H +
Sbjct: 472 TWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531
Query: 576 IKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEA 635
I G +++ +A+ID YAKCGD+ A F ++ +S ++ ++++I AY HG + A
Sbjct: 532 IISGLK-DLFTDTALIDMYAKCGDLNAAETVF-RAMSSRSIVSWSSMINAYGMHGRIGSA 589
Query: 636 MEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVD 695
+ F++M + +P++ F++V+SAC H G V++G F M S +G+ P+ + + C +D
Sbjct: 590 ISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFID 648
Query: 696 MLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAA 755
+LSR+G L++A I+ MPF +V+ SL++GCRIH ++ + L ++ +
Sbjct: 649 LLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGY 708
Query: 756 HVLLS 760
+ LLS
Sbjct: 709 YTLLS 713
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 7/285 (2%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
++ D LA S+S EN LG Q+HGH+++ +++ F+QN+LI MYSK G
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSAS 459
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
VF+++ R++V+W ++ QNG + ++ M + NE +V++ C S+G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
+ E G +H L I K+ F ++++ YAK GD+ AAE VF ++SS + W++MI
Sbjct: 520 SLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578
Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
Y G A++ + M+ G ++ F+N L C + G+ L+ V
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSP 638
Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERM---ADKDVISWNTLFGG 321
+ ID+ +S + A++ + M AD V W +L G
Sbjct: 639 NSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV--WGSLVNG 681
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 185/644 (28%), Positives = 316/644 (49%), Gaps = 23/644 (3%)
Query: 125 EFDMGLKMYVDMKTNGFMPNEFA-VGSVMKVCVSMGASEFGYSIHCFALKIRIEK---NP 180
EF D NG E V ++ + C ++ +++ C ++ + K N
Sbjct: 33 EFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQSAK------CLHARLVVSKQIQNV 86
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS-MLF 239
+ ++N Y LG+VA A F I + DV WN MI GY G E + S ML
Sbjct: 87 CISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLS 146
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
G+T D TF + L+ C V D G +IH L ++ + + +LI +Y + +
Sbjct: 147 SGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN 203
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRP-NHVTFSILLRQCG 358
A +F+ M +D+ SWN + G+ ++ N + +L +G R + VT LL C
Sbjct: 204 ARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACT 258
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
+ D + G+ + ++ G E V++ LI ++ G + VFD + +++ +WN
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNS 318
Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG 478
++ Y N + F + S ++ + T + + + + + G ++ G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 479 -FSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
F I ++++ Y G +D++ N D+ SW ++S G EA+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 538 HSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
+ + E GE ++ ++L +C+ GA ++ +H ++K G +V+V +++ D Y K
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGK 498
Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
CG ++ A F Q N V +NTLI + HG +A+ +F +M ++P TFV+
Sbjct: 499 CGRLEDALSLFYQIPRVNSV-PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
++SACSH GLVD+G F+ M + YG+ PS YGC+VDM R G LE A I+ M Q
Sbjct: 558 LLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617
Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
P +++ +LLS CR+HGN +LG+ ASE L + P++ HVLLS
Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLS 661
Score = 219 bits (558), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 157/653 (24%), Positives = 298/653 (45%), Gaps = 52/653 (7%)
Query: 66 VHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGE 125
+H +V ++ + L+ +Y G FD + R++ +W L++S + G
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 126 FDMGLKMY-VDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGC 184
++ + + M ++G P+ SV+K C ++ G IHC ALK + +V
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAA 189
Query: 185 SVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITM 244
S+++ Y++ V A +F + D+G WNAMI GY G EAL + + + M
Sbjct: 190 SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR----AM 245
Query: 245 DKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVF 304
D T ++ L C+ DF+ G IH I+ +E + + N LID+Y + + KVF
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVF 305
Query: 305 ERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLD 364
+RM +D+ISWN++ + N+ P + SLF + LS +P+ +T L +L D+
Sbjct: 306 DRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIR 365
Query: 365 LGLQLQCLALHCG-FLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGY 423
+Q L G FL++ + ++++ M+ + G V+ A +VF+ + ++ +WN ++SGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 424 CFNCCDADVLKTFCNIWESG-VEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSC 482
N ++ ++ + + E G + N T+ V+ C ++ + ++HG ++K G
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 483 GYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVE 542
++ +SL Y G+L+++ R++ W +++ GH +AV +F +++
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 543 AGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKG 602
G KPD T+L++C+ S ++D C ++
Sbjct: 546 EGVKPDHITFVTLLSACS--------------------------HSGLVDEGQWCFEMMQ 579
Query: 603 ARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACS 662
S Y ++ Y G + A++ M +LQP + + +++SAC
Sbjct: 580 TDYGITPSLKH-----YGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACR 631
Query: 663 HKGLVDKGCLLFKSMDSQYGMQPSPDCYG---CLVDMLSRNGYLEDAKHVIEI 712
G VD G + S++ + P+ G L +M + G E + I
Sbjct: 632 VHGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/478 (26%), Positives = 221/478 (46%), Gaps = 24/478 (5%)
Query: 58 KSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIV 117
++ + G ++H +K GF D+++ +LI +YS+ G +FDEM R++ SW ++
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 118 SAAIQNGEFDMGLKMYVDMKTNGFMP-NEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
S Q+G L + +NG + V S++ C G G +IH +++K +
Sbjct: 224 SGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
E FV +++ YA+ G + ++VF + D+ WN++I Y A+++
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 237 MLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECSISIVNALIDMYIKS 294
M I D T I+ S + D R + G +R +E I+I NA++ MY K
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVMYAKL 397
Query: 295 SGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSIL 353
+D A VF + + DVISWNT+ G+++N + +++ G N T+ +
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 354 LRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNI 413
L C + L G++L L G + V +SL M+ +CG +E A S+F + N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 414 TTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQ---QM 466
WN L++ + F+ + F + + GV+ + TF ++ C S E Q +M
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 467 VGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAE-RLDMASWGAMMSA 523
+ +G C ++ Y GQL+ + +F + D + WGA++SA
Sbjct: 578 MQTDYGITPSLKHYGC------MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/648 (26%), Positives = 314/648 (48%), Gaps = 37/648 (5%)
Query: 148 VGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSIS 207
+ + ++ C + A + G SI +K I +N F+ +V++ Y ++ A +VF +S
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 208 SDDVGCWNAMIGGYAHCGYGFEALNVVSSML-FEGITMDKYTFINALQGCSLVADFDIGR 266
++ W M+ GY G +A+ + ML E +++ + L+ C LV D +G
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 267 QIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENK 326
++ I + + + ++N+++DMY+K+ + A F+ + SWNTL G+ +
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 327 NPGQTASLFHK---------------FILSGSRPNHVTFSILLRQCGKLLD--------- 362
+ +LFH+ F+ GS P + F + +++ G +LD
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLK 246
Query: 363 -------LDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSY---KN 412
L +G QL C + G S+LI M+ CG++ A VF +
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 413 ITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHG 472
+ WN +LSG+ N + L I++S + + T ++ C N ++ Q+H
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHS 366
Query: 473 AIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHE 532
++ +G+ + S L+ + N G + ++ + + D+ ++ ++ V G N
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSL 426
Query: 533 AVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
A +F L++ G D++I+ IL C+++ + K IH IK G+ +E A+A++D
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 593 AYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQA 652
Y KCG+I + FD DV+ + +I+ + +G V EA F KM ++P++
Sbjct: 487 MYVKCGEIDNGVVLFDGMLE-RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKV 545
Query: 653 TFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI 712
TF+ ++SAC H GL+++ ++M S+YG++P + Y C+VD+L + G ++A +I
Sbjct: 546 TFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINK 605
Query: 713 MPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
MP +P T++ SLL+ C H N L +EKLL P + + + LS
Sbjct: 606 MPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLS 653
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/684 (24%), Positives = 294/684 (42%), Gaps = 72/684 (10%)
Query: 63 GTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQ 122
G + H++K G + ++F+ NN+I+MY +VFDEM+ERN+V+WT +VS
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 123 NGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPF 181
+G+ + +++Y M + NEF +V+K C +G + G ++ K + +
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 182 VGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEAL---------N 232
+ SV++ Y K G + A F I WN +I GY G EA+ N
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 233 VVS---------------------SMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
VVS M EG+ +D + L+ CS +G+Q+H
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263
Query: 272 IIRSEVECSISIVNALIDMYIKSSGMDYAFKVF--ERMA-DKDVISWNTLFGGFSENKNP 328
+++S +E S ++ALIDMY + YA VF E++A + V WN++ GF N+
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 329 GQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSL 388
L + S + T S L+ C ++L LGLQ+ L + G+ + V S L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 389 IYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNG 448
+ + G ++ AH +F + K+I ++ L+ G + ++ F + + G++ +
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 449 CTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG 508
+++ C + QIHG IK G+ S ++L+ YV G++DN +G
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 509 AERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQRT 568
D+ SW ++ G EA FH ++ G +P++ +L++C G +
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEA 563
Query: 569 KSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAH 628
+S +K + E Y+ Y ++
Sbjct: 564 RSTLE-TMKSEYGLEPYLEH------------------------------YYCVVDLLGQ 592
Query: 629 HGLVSEAMEIFDKMKLANLQPSQATFVSVMSAC-SHKGLVDKGCLLFKSMDSQYGMQPSP 687
GL EA E+ +KM L+P + + S+++AC +HK + G + + G P
Sbjct: 593 AGLFQEANELINKMP---LEPDKTIWTSLLTACGTHK---NAGLVTVIAEKLLKGFPDDP 646
Query: 688 DCYGCLVDMLSRNGYLEDAKHVIE 711
Y L + + G + V E
Sbjct: 647 SVYTSLSNAYATLGMWDQLSKVRE 670
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 204/458 (44%), Gaps = 45/458 (9%)
Query: 62 LGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF--DEMAERNLVS-WTLIVS 118
+G Q+H +VK G + F + LI MYS CG + VF +++A + V+ W ++S
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLS 315
Query: 119 AAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEK 178
+ N E + L + + + + + + + +K+C++ G +H + E
Sbjct: 316 GFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYEL 375
Query: 179 NPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSML 238
+ VG +++ +A +G++ A ++F+ + + D+ ++ +I G G+ A + ++
Sbjct: 376 DYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELI 435
Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
G+ D++ N L+ CS +A G+QIHGL I+ E AL+DMY+K +D
Sbjct: 436 KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEID 495
Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
+F+ M ++DV+SW + GF +N + FHK I G PN VTF LL C
Sbjct: 496 NGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC- 554
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGA---VEMAHSVFDNVSYKNI-T 414
H G L+E S+L M G +E + V D + +
Sbjct: 555 ---------------RHSGLLEEAR--STLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQ 597
Query: 415 TWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAI 474
NEL+ N + KT IW S ++ C +N +V I +
Sbjct: 598 EANELI-----NKMPLEPDKT---IWTS-----------LLTACGTHKNAGLVTVIAEKL 638
Query: 475 IKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERL 512
+K GF + +SL +Y G D + A++L
Sbjct: 639 LK-GFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKL 675
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 210/499 (42%), Gaps = 36/499 (7%)
Query: 242 ITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAF 301
+ MD L+ C V F G I +I+ + ++ I N +I MY+ + A
Sbjct: 1 MVMDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH 60
Query: 302 KVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR-PNHVTFSILLRQCGKL 360
KVF+ M+++++++W T+ G++ + P + L+ + + S N +S +L+ CG +
Sbjct: 61 KVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLV 120
Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
D+ LG+ + + + +S++ M+ + G + A+S F + + T+WN L+
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 421 SGYC----------------------FNCC--------DADVLKTFCNIWESGVEVNGCT 450
SGYC +NC L+ + G+ ++G
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240
Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQL---DNSFEFSN 507
++ C M Q+H ++K+G S + S+LI Y N G L + F
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 508 GAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIGAYQR 567
A +A W +M+S + N A+ + + ++ D Y L L C +
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 568 TKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYA 627
+H V+ G+ + V S ++D +A G+I+ A F + N D+I ++ LI
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPN-KDIIAFSGLIRGCV 419
Query: 628 HHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSP 687
G S A +F ++ L Q +++ CS + G + + + G + P
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQI-HGLCIKKGYESEP 478
Query: 688 DCYGCLVDMLSRNGYLEDA 706
LVDM + G +++
Sbjct: 479 VTATALVDMYVKCGEIDNG 497
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 135/300 (45%), Gaps = 4/300 (1%)
Query: 43 DPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
D L+ +L + N + LG QVH +V G+ D + + L+ +++ G ++F
Sbjct: 341 DSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLF 400
Query: 103 DEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASE 162
+ +++++++ ++ +++G + ++ ++ G ++F V +++KVC S+ +
Sbjct: 401 HRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLG 460
Query: 163 FGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA 222
+G IH +K E P ++++ Y K G++ +F + DV W +I G+
Sbjct: 461 WGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFG 520
Query: 223 HCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSE--VECS 280
G EA M+ GI +K TF+ L C + R ++SE +E
Sbjct: 521 QNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE-TMKSEYGLEPY 579
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERMA-DKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
+ ++D+ ++ A ++ +M + D W +L +KN G + K +
Sbjct: 580 LEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLL 639
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 93/182 (51%), Gaps = 4/182 (2%)
Query: 548 DEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAF 607
D ++ L C + A++R +SI VIK G + V++A+ VI Y + A F
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 608 DQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS-QATFVSVMSACSHKGL 666
D+ + +++ + T++ Y G ++A+E++ +M + + + + + +V+ AC G
Sbjct: 64 DE-MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 667 VDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLL 726
+ G L+++ + + ++ +VDM +NG L +A + + +PS T + +L+
Sbjct: 123 IQLGILVYERIGKE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLI 180
Query: 727 SG 728
SG
Sbjct: 181 SG 182
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 181/669 (27%), Positives = 322/669 (48%), Gaps = 34/669 (5%)
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPN--EFAVGSVMKVCVS 157
++FD + + V W I+ I N L Y MK N + S +K C
Sbjct: 60 QLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAE 119
Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVA------AAERVFYSISSDDV 211
+ G ++HC ++ + V S++N Y + +VF ++ +V
Sbjct: 120 TKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNV 179
Query: 212 GCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGL 271
WN +I Y G EA M+ + +F+N S+ +GL
Sbjct: 180 VAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGL 239
Query: 272 IIR--SEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPG 329
+++ E + +V++ I MY + ++ + +VF+ ++++ WNT+ G + +N
Sbjct: 240 MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLV 299
Query: 330 QTASLFHKFILSGSRP---NHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE---- 382
++ LF + I GS+ + VT+ + L ++LG Q GF+ +
Sbjct: 300 ESIELFLEAI--GSKEIVSDEVTYLLAASAVSALQQVELGRQFH------GFVSKNFREL 351
Query: 383 --NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW 440
+ +SL+ M+ RCG+V + VF ++ +++ +WN ++S + N D + L +
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 441 ESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLD 500
+ G +++ T ++ N+++ Q H +I+ G G + S LI Y G +
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIR 470
Query: 501 NS---FEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILN 557
S FE S AER D A+W +M+S GH + +F ++E +P+ + +IL
Sbjct: 471 ISQKLFEGSGYAER-DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILP 529
Query: 558 SCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVI 617
+C+ IG+ K +H F I+ + V+VASA++D Y+K G IK A F Q+ N V
Sbjct: 530 ACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSV- 588
Query: 618 VYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSM 677
Y T+I+ Y HG+ A+ +F M+ + ++P TFV+V+SACS+ GL+D+G +F+ M
Sbjct: 589 TYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Query: 678 DSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS-PTVYRSLLSGCRIHGNKE 736
Y +QPS + Y C+ DML R G + +A ++ + + + ++ SLL C++HG E
Sbjct: 649 REVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELE 708
Query: 737 LGEWASEKL 745
L E SE+L
Sbjct: 709 LAETVSERL 717
Score = 192 bits (488), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/534 (26%), Positives = 261/534 (48%), Gaps = 31/534 (5%)
Query: 49 KSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKC----GYFGWGL--RVF 102
K+ + ++NLK+ G VH H+++ + + N+L+ MY C F + + +VF
Sbjct: 115 KACAETKNLKA---GKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVF 171
Query: 103 DEMAERNLVSWTLIVSAAIQNG-------EFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
D M +N+V+W ++S ++ G +F + ++M V F+ N F S+ +
Sbjct: 172 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV-NVFPAVSISR-- 228
Query: 156 VSMGASEFGYSIHCFALKIRIE--KNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGC 213
S+ + Y + LK+ E K+ FV S ++ YA+LGD+ ++ RVF S ++
Sbjct: 229 -SIKKANVFYGL---MLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 214 WNAMIGGYAHCGYGFEALNV-VSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLI 272
WN MIG Y E++ + + ++ + I D+ T++ A S + ++GRQ HG +
Sbjct: 285 WNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 273 IRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTA 332
++ E I IVN+L+ MY + + +F VF M ++DV+SWNT+ F +N +
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 333 SLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMF 392
L ++ G + +++T + LL L + ++G Q + G + E + S LI M+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMY 463
Query: 393 CRCGAVEMAHSVFDNVSY--KNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCT 450
+ G + ++ +F+ Y ++ TWN ++SGY N F + E + N T
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 451 FFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE-FSNGA 509
++ C + + + Q+HG I+ ++ S+L+ Y G + + + FS
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 510 ERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAIG 563
ER + ++ M+ G A+++F S+ E+G KPD +L++C+ G
Sbjct: 584 ER-NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 246/505 (48%), Gaps = 20/505 (3%)
Query: 50 SLSLSENLKSRVLGTQVHGHIVKLG--FTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAE 107
++S+S ++K +G ++KLG + D+F+ ++ I+MY++ G RVFD E
Sbjct: 223 AVSISRSIKK---ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVE 279
Query: 108 RNLVSWTLIVSAAIQNGEFDMGLKMYVD-MKTNGFMPNEFAVGSVMKVCVSMGASEFGYS 166
RN+ W ++ +QN ++++++ + + + +E ++ E G
Sbjct: 280 RNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ 339
Query: 167 IHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGY 226
H F K E + S++ Y++ G V + VF S+ DV WN MI + G
Sbjct: 340 FHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGL 399
Query: 227 GFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNA 286
E L +V M +G +D T L S + + +IG+Q H +IR ++ + +
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSY 458
Query: 287 LIDMYIKSSGMDYAFKVFE--RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
LIDMY KS + + K+FE A++D +WN++ G+++N + +T +F K + R
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIR 518
Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEEN-VTSSLIYMFCRCGAVEMAHS 403
PN VT + +L C ++ +DLG QL ++ +LD+ V S+L+ M+ + GA++ A
Sbjct: 519 PNAVTVASILPACSQIGSVDLGKQLHGFSIR-QYLDQNVFVASALVDMYSKAGAIKYAED 577
Query: 404 VFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS-- 461
+F +N T+ ++ GY + + F ++ ESG++ + TF V+ C S
Sbjct: 578 MFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGL 637
Query: 462 --ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNG-AERLDMAS-W 517
E ++ ++ + SS Y C + + V G+++ ++EF G E ++A W
Sbjct: 638 IDEGLKIFEEMR-EVYNIQPSSEHYCCITDMLGRV--GRVNEAYEFVKGLGEEGNIAELW 694
Query: 518 GAMMSALVHQGHNHEAVTIFHSLVE 542
G+++ + G A T+ L +
Sbjct: 695 GSLLGSCKLHGELELAETVSERLAK 719
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 252/563 (44%), Gaps = 24/563 (4%)
Query: 194 GDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEG--ITMDKYTFIN 251
G+ A ++F +I WN +I G+ EAL S M D YT+ +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 252 ALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGM------DYAFKVFE 305
L+ C+ + G+ +H +IR S + N+L++MY+ D KVF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 306 RMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTF-----SILLRQCGKL 360
M K+V++WNTL + + + F + +P+ V+F ++ + + K
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 361 LDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELL 420
++ GL L+ L ++ + V SS I M+ G +E + VFD+ +NI WN ++
Sbjct: 233 ANVFYGLMLK---LGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 421 SGYCFNCCDADVLKTFCN-IWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
Y N C + ++ F I + + T+ + ++ Q HG + K
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
I +SL+ Y G + SF D+ SW M+SA V G + E + + +
Sbjct: 350 ELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYE 409
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
+ + G K D + +L++ + + + K H F+I+ G E + S +ID Y+K G
Sbjct: 410 MQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGL 468
Query: 600 IKGARMAFDQS-FNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVM 658
I+ ++ F+ S + D +N++I Y +G + +F KM N++P+ T S++
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASIL 528
Query: 659 SACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
ACS G VD G L QY + + LVDM S+ G ++ A+ + + S
Sbjct: 529 PACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 719 PTVYRSLLSGCRIHGNKELGEWA 741
T Y +++ G HG +GE A
Sbjct: 588 VT-YTTMILGYGQHG---MGERA 606
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 134/295 (45%), Gaps = 12/295 (4%)
Query: 387 SLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEV 446
S + C+ G ++A +FD + WN ++ G+ N + L + + ++
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 447 N--GCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFE 504
N T+ ++ C ++N + +H +I+ +S + +SL+ YV+ + FE
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 505 FS------NGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNS 558
+ + R ++ +W ++S V G N EA F ++ KP + +
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 559 CAAIGAYQRTKSIHPFVIKLG--FNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDV 616
+ + ++ + ++KLG + +++V S+ I YA+ GDI+ +R FD N +
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERN-I 282
Query: 617 IVYNTLIMAYAHHGLVSEAMEIF-DKMKLANLQPSQATFVSVMSACSHKGLVDKG 670
V+NT+I Y + + E++E+F + + + + T++ SA S V+ G
Sbjct: 283 EVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
+R + + +A L + S LG Q+HG ++ ++F+ + L+ MYSK G +
Sbjct: 517 IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAE 576
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
+F + ERN V++T ++ Q+G + + +++ M+ +G P+ +V+ C G
Sbjct: 577 DMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
Query: 160 ASEFGYSI 167
+ G I
Sbjct: 637 LIDEGLKI 644
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 270 bits (690), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 268/530 (50%), Gaps = 36/530 (6%)
Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSS--GMDYAFKVFERMADKDVISWNTLFGGFS 323
+Q HG +IR+ + L M SS ++YA KVF+ + + +WNTL ++
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 324 ENKNPGQTASLFHKFIL-SGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEE 382
+P + F + S PN TF L++ ++ L LG L +A+ +
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 383 NVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWES 442
V +SLI+ + CG ++ A VF + K++ +WN +++G+ L+ F +
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 443 GVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTG--------------FSSCGYI--- 485
V+ + T V+ C + N + Q+ I + ++ CG I
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 486 --------------CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNH 531
++++ Y + + E N + D+ +W A++SA G +
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 532 EAVTIFHSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAV 590
EA+ +FH L ++ K ++ L + L++CA +GA + + IH ++ K G +V SA+
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 591 IDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPS 650
I Y+KCGD++ +R F+ S DV V++ +I A HG +EA+++F KM+ AN++P+
Sbjct: 407 IHMYSKCGDLEKSREVFN-SVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 651 QATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVI 710
TF +V ACSH GLVD+ LF M+S YG+ P Y C+VD+L R+GYLE A I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 711 EIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
E MP PS +V+ +LL C+IH N L E A +LL L P+ND AHVLLS
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS 575
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/589 (23%), Positives = 267/589 (45%), Gaps = 52/589 (8%)
Query: 48 AKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGY--FGWGLRVFDEM 105
++ +SL E S Q HGH+++ G +D + + L AM + + + +VFDE+
Sbjct: 31 SRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGF-MPNEFAVGSVMKVCVSMGASEFG 164
+ N +W ++ A + + + ++DM + PN++ ++K + + G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
S+H A+K + + FV S+++ Y GD+ +A +VF +I DV WN+MI G+
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
G +AL + M E + T + L C+ + + + GRQ+ I + V ++++
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 270
Query: 285 NALIDMYIKSSGMDYAFKVFERMAD-------------------------------KDVI 313
NA++DMY K ++ A ++F+ M + KD++
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGS-RPNHVTFSILLRQCGKLLDLDLGLQLQCL 372
+WN L + +N P + +FH+ L + + N +T L C ++ L+LG +
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADV 432
G +VTS+LI+M+ +CG +E + VF++V +++ W+ ++ G + C +
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 433 LKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQI---HGAIIKTGFSSCGYI 485
+ F + E+ V+ NG TF V C + E + + Q+ +G + + +C I
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYAC--I 508
Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMAS-WGAMMSALVHQGHNHEAVTIFHSLVEAG 544
L +S G L+ + +F S WGA++ A + + A L+E
Sbjct: 509 VDVLGRS----GYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELE 564
Query: 545 EKPD-EYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVID 592
+ D ++L + N A +G ++ + + G E +S ID
Sbjct: 565 PRNDGAHVL--LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 189/413 (45%), Gaps = 38/413 (9%)
Query: 46 FLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEM 105
FL K+ + + S LG +HG VK +D+F+ N+LI Y CG +VF +
Sbjct: 136 FLIKA---AAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 106 AERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGY 165
E+++VSW +++ +Q G D L+++ M++ + + V+ C + EFG
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 166 SIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVF-----------------YSISS 208
+ + + R+ N + ++L+ Y K G + A+R+F Y+IS
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 209 D--------------DVGCWNAMIGGYAHCGYGFEALNVVSSM-LFEGITMDKYTFINAL 253
D D+ WNA+I Y G EAL V + L + + +++ T ++ L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 254 QGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVI 313
C+ V ++GR IH I + + + + +ALI MY K ++ + +VF + +DV
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 314 SWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQL-QCL 372
W+ + GG + + + +F+K + +PN VTF+ + C +D L +
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 373 ALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT-WNELLSGYC 424
+ G + EE + ++ + R G +E A + + T+ W LL G C
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALL-GAC 544
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 153/310 (49%), Gaps = 12/310 (3%)
Query: 465 QMVGQIHGAIIKTGFSSCGYICSSL--IKSYVNFGQLDNSFEFSNGAERLDMASWGAMMS 522
+ + Q HG +I+TG S Y S L + + +F L+ + + + + + +W ++
Sbjct: 44 RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIR 103
Query: 523 ALVHQGHNHEAVTIFHSLVEAGE-KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFN 581
A ++ F +V + P++Y ++ + A + + +S+H +K
Sbjct: 104 AYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 582 TEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDK 641
++V+VA+++I Y CGD+ A F + DV+ +N++I + G +A+E+F K
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVF-TTIKEKDVVSWNSMINGFVQKGSPDKALELFKK 222
Query: 642 MKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNG 701
M+ +++ S T V V+SAC+ ++ G + ++ + + ++DM ++ G
Sbjct: 223 MESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR-VNVNLTLANAMLDMYTKCG 281
Query: 702 YLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKND--AAHVLL 759
+EDAK + + M + + T + ++L G I + E A+ ++L +P+ D A + L+
Sbjct: 282 SIEDAKRLFDAMEEKDNVT-WTTMLDGYAISEDYE----AAREVLNSMPQKDIVAWNALI 336
Query: 760 SKRKRQREGN 769
S ++ + N
Sbjct: 337 SAYEQNGKPN 346
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 55/120 (45%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
++ + I L +LS + + LG +H +I K G + + + LI MYSKCG
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMG 159
VF+ + +R++ W+ ++ +G + + M+ M+ PN +V C G
Sbjct: 421 EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTG 480
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/679 (27%), Positives = 336/679 (49%), Gaps = 50/679 (7%)
Query: 117 VSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR 175
++ ++GE LK++ D+ + P++++V + + + FG +HC+A++
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 176 IEKNPFVGCSVLNFYAKLGDVAAAERVFYSISS--------------------------- 208
+ + V ++L+ Y +LG++A+ ++ F I
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 209 -----DDVGCWNAMIGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFD 263
DDV WNAMI G GY ++ + M G+ DK+ F L C D
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDY-GSLD 206
Query: 264 IGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER--MADKDVISWNTLFGG 321
G+Q+H L+I++ + S+VNALI MY + A VFE +A +D +++N + G
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 322 FSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
+ K ++ +F K + + RP +TF ++ C +G Q+ LA+ G+
Sbjct: 267 LAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKY 322
Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
V+++ + M+ AH VF+++ K++ TWN ++S Y + + +
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDN 501
GV+ + TF ++ T + +MV IIK G SS I ++LI +Y GQ++
Sbjct: 383 IGVKPDEFTFGSLLATSLDLDVLEMV---QACIIKFGLSSKIEISNALISAYSKNGQIEK 439
Query: 502 SFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEK--PDEYILGTILNSC 559
+ + R ++ SW A++S H G E + F L+E+ + PD Y L T+L+ C
Sbjct: 440 ADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC 499
Query: 560 AAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVY 619
+ + H +V++ G E + +A+I+ Y++CG I+ + F+Q + DV+ +
Sbjct: 500 VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ-MSEKDVVSW 558
Query: 620 NTLIMAYAHHGLVSEAMEIFDKMK-LANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMD 678
N+LI AY+ HG A+ + M+ + P ATF +V+SACSH GLV++G +F SM
Sbjct: 559 NSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMV 618
Query: 679 SQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEI--MPFQPSPTVYRSLLSGCRIHGNKE 736
+G+ + D + CLVD+L R G+L++A+ +++I V+ +L S C HG+ +
Sbjct: 619 EFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLK 678
Query: 737 LGEWASEKLLLLLPKNDAA 755
LG+ + KLL+ K+D +
Sbjct: 679 LGKMVA-KLLMEKEKDDPS 696
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/638 (23%), Positives = 286/638 (44%), Gaps = 62/638 (9%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCG------ 93
LR D ++ +++ + +L+ + G QVH + ++ G + N L+++Y + G
Sbjct: 53 LRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLK 112
Query: 94 ----------YFGW---------------GLRVFDEMAERNLVS-WTLIVSAAIQNGEFD 127
+ W VFD+M ER+ V+ W +++ ++G +
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHE 172
Query: 128 MGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNPFVGCSVL 187
++++ +M G ++F +++ +C G+ +FG +H +K F+ SV+
Sbjct: 173 TSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGF----FIASSVV 227
Query: 188 N----FYAKLGDVAAAERVF--YSISSDDVGCWNAMIGGYAHCGYGF---EALNVVSSML 238
N Y V A VF ++ D +N +I G A GF E+L V ML
Sbjct: 228 NALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA----GFKRDESLLVFRKML 283
Query: 239 FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMD 298
+ TF++ + CS A +G Q+HGL I++ E + NA + MY
Sbjct: 284 EASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFG 340
Query: 299 YAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCG 358
A KVFE + +KD+++WNT+ +++ K S++ + + G +P+ TF LL
Sbjct: 341 AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS- 399
Query: 359 KLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
LDLD+ +Q + G + ++++LI + + G +E A +F+ KN+ +WN
Sbjct: 400 --LDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNA 457
Query: 419 LLSGYCFNCCDADVLKTFCNIWESGVEV--NGCTFFYVVETCCRSENQQMVGQIHGAIIK 476
++SG+ N + L+ F + ES V + + T ++ C + + + Q H +++
Sbjct: 458 IISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR 517
Query: 477 TGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTI 536
G I ++LI Y G + NS E N D+ SW +++SA G AV
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNT 577
Query: 537 FHSLVEAGEK-PDEYILGTILNSCAAIGAYQRTKSIHPFVIKL-GFNTEVYVASAVIDAY 594
+ ++ + G+ PD +L++C+ G + I +++ G V S ++D
Sbjct: 578 YKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLL 637
Query: 595 AKCGDIKGAR--MAFDQSFNSNDVIVYNTLIMAYAHHG 630
+ G + A + + + V V+ L A A HG
Sbjct: 638 GRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 242/557 (43%), Gaps = 34/557 (6%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
+R D A LS+ + S G QVH ++K GF + N LI MY C
Sbjct: 186 VRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDAC 244
Query: 100 RVFDE--MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVS 157
VF+E +A R+ V++ +++ + + D L ++ M P + SVM C
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDG-LAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC-- 301
Query: 158 MGASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAM 217
+ G+ +H A+K EK V + + Y+ D AA +VF S+ D+ WN M
Sbjct: 302 -SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTM 360
Query: 218 IGGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEV 277
I Y G A++V M G+ D++TF +L SL D D+ + II+ +
Sbjct: 361 ISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTF-GSLLATSL--DLDVLEMVQACIIKFGL 417
Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
I I NALI Y K+ ++ A +FER K++ISWN + GF N P + F
Sbjct: 418 SSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSC 477
Query: 338 FILSGSR--PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRC 395
+ S R P+ T S LL C L LG Q L G E + ++LI M+ +C
Sbjct: 478 LLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537
Query: 396 GAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESG-VEVNGCTFFYV 454
G ++ + VF+ +S K++ +WN L+S Y + + + T+ + + G V + TF V
Sbjct: 538 GTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAV 597
Query: 455 VETCCRS-------ENQQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSN 507
+ C + E + + HG I SC L+ G LD +
Sbjct: 598 LSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSC------LVDLLGRAGHLDEAESLVK 651
Query: 508 GAE-----RLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCAAI 562
+E R+D+ W A+ SA G + L+E EK D + + N A
Sbjct: 652 ISEKTIGSRVDV--WWALFSACAAHGDLKLGKMVAKLLMEK-EKDDPSVYVQLSNIYAGA 708
Query: 563 GAYQRTKSIHPFVIKLG 579
G ++ + + +G
Sbjct: 709 GMWKEAEETRRAINMIG 725
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/644 (26%), Positives = 309/644 (47%), Gaps = 30/644 (4%)
Query: 130 LKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIR----------IEKN 179
+ ++ D+ + PN F + ++ + S + F L++ +++
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTT--------SFNSFKLQVEQVQTHLTKSGLDRF 84
Query: 180 PFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLF 239
+V S+LN Y K G V +A+ +F + D WNA+I GY+ GY +A + ML
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 240 EGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDY 299
+G + T +N L C GR +HG+ +S +E + NALI Y K + +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 300 AFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGK 359
A +F M DK +SWNT+ G +S++ + ++F + VT
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTII-------N 257
Query: 360 LLDLDLGLQ-LQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNE 418
LL + + L CL + CG +++ +V +SL+ + RCG + A ++ + +I
Sbjct: 258 LLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317
Query: 419 LLSGYCFNCCDADV-LKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKT 477
++S Y D D+ + F + ++++ ++ C +S + + +HG IK+
Sbjct: 318 IVSCYAEKG-DMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS 376
Query: 478 GFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIF 537
G + + + LI Y F ++ + + SW +++S V G A +F
Sbjct: 377 GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVF 436
Query: 538 HSL-VEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAK 596
H + + G PD + ++L C+ + K +H + ++ F E +V +A+ID YAK
Sbjct: 437 HQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAK 496
Query: 597 CGDIKGARMAFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVS 656
CG+ A F +S + +N++I Y+ GL A+ + +M+ L+P + TF+
Sbjct: 497 CGNEVQAESVF-KSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLG 555
Query: 657 VMSACSHKGLVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQ 716
V+SAC+H G VD+G + F++M ++G+ P+ Y +V +L R +A ++I M +
Sbjct: 556 VLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIK 615
Query: 717 PSPTVYRSLLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
P V+ +LLS C IH E+GE+ + K+ +L KN +VL+S
Sbjct: 616 PDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMS 659
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 117/516 (22%), Positives = 232/516 (44%), Gaps = 9/516 (1%)
Query: 45 IFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDE 104
IFL + + + K +V QV H+ K G ++++ +L+ +Y K G +FDE
Sbjct: 53 IFLQATTTSFNSFKLQV--EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDE 110
Query: 105 MAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFG 164
M ER+ V W ++ +NG K+++ M GF P+ + +++ C G G
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
Query: 165 YSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHC 224
S+H A K +E + V ++++FY+K ++ +AE +F + WN MIG Y+
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 225 GYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIV 284
G EA+ V +M + + + T IN L++ +H L+++ + IS+V
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIIN------LLSAHVSHEPLHCLVVKCGMVNDISVV 284
Query: 285 NALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSR 344
+L+ Y + + A +++ ++ ++ ++E + F K +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 345 PNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSV 404
+ V +L C K +D+G+ L A+ G + V + LI M+ + VE +
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 405 FDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIW-ESGVEVNGCTFFYVVETCCRSEN 463
F+ + + +WN ++SG + + + F + G+ + T ++ C +
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 464 QQMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSA 523
+ ++HG ++ F + ++C++LI Y G + + A+W +M+S
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 524 LVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSC 559
G H A++ + + E G KPDE +L++C
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 40 LRKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGL 99
L D I +A L+ L LG ++HG+ ++ F N+ F+ LI MY+KCG
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 100 RVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVC 155
VF + +W ++S +G L Y++M+ G P+E V+ C
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 173/696 (24%), Positives = 342/696 (49%), Gaps = 20/696 (2%)
Query: 80 FLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTN 139
+ NNLI+MY +C +VFD+M +RN+V+ +SA + MG ++ +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVT-LFGLSAVFE--YVSMGSSLHSQIIKL 79
Query: 140 G------FMP-NEFA--VGSVMKVCVSMGASEFGYSIHCFALKI---RIEKNPFVGCSVL 187
G FMP NE A V + + CVS+ + IH L ++P+ +++
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 188 NFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYA-HCGYGFEALNVVSSMLFEGITMDK 246
+ Y + G + A +VF + +V +NA+ Y+ + + A + + M FE + +
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 247 YTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFER 306
TF + +Q C+++ D +G ++ II+ ++ + +++ MY ++ A ++F+
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 307 MADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLG 366
+ ++D ++WNT+ G +N F ++SG P T+SI+L C KL LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 367 LQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFN 426
+ + L + + ++L+ M+C CG + A VF + N+ +WN ++SG N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 427 CCDADVLKTFCNIWE-SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGFSSCGYI 485
+ + + S + TF + E +HG + K G+ ++
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439
Query: 486 CSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGE 545
++L+ Y + +++ + + + D+ W M+ G++ AV F +
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Query: 546 KPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARM 605
+ D + L +++ +C+ + ++ + H I+ GF+ + V A++D Y K G + A
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 606 AFDQSFNSNDVIVYNTLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKG 665
F + N D+ +N+++ AY+ HG+V +A+ F+++ P T++S+++ACSH+G
Sbjct: 560 IFSLASNP-DLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRG 618
Query: 666 LVDKGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPF-QPSPTVYRS 724
+G L+ M Q G++ Y C+V+++S+ G +++A +IE P ++R+
Sbjct: 619 STLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRT 677
Query: 725 LLSGCRIHGNKELGEWASEKLLLLLPKNDAAHVLLS 760
LLS C N ++G +A+E++L L P++ A H+LLS
Sbjct: 678 LLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLS 713
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 259/567 (45%), Gaps = 6/567 (1%)
Query: 65 QVHGHIVKLGF---TNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAI 121
Q+H ++ G T + NNLI+MY +CG +VFD+M RN+VS+ + SA
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 122 QNGEF-DMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRIEKNP 180
+N +F + M PN S+++VC + G S++ +K+ N
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 181 FVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSSMLFE 240
V SVL Y+ GD+ +A R+F +++ D WN MI G + L +ML
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 241 GITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYA 300
G+ ++T+ L GCS + + +G+ IH II S+ + + NAL+DMY M A
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 301 FKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI-LSGSRPNHVTFSILLRQCGK 359
F VF R+ + +++SWN++ G SEN Q ++ + + +S RP+ TFS + +
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 360 LLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNEL 419
G L G+ V ++L+ M+ + E A VFD + +++ W E+
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 420 LSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF 479
+ G+ ++ F ++ +G + V+ C + H I+TGF
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 480 SSCGYICSSLIKSYVNFGQLDNSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHS 539
+C +L+ Y G+ + + + A D+ W +M+ A G +A++ F
Sbjct: 535 DCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQ 594
Query: 540 LVEAGEKPDEYILGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGD 599
++E G PD ++L +C+ G+ + K + + + G S +++ +K G
Sbjct: 595 ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGL 654
Query: 600 IKGARMAFDQS-FNSNDVIVYNTLIMA 625
+ A +QS +N ++ TL+ A
Sbjct: 655 VDEALELIEQSPPGNNQAELWRTLLSA 681
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/482 (24%), Positives = 225/482 (46%), Gaps = 21/482 (4%)
Query: 57 LKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLI 116
L+ ++G+ ++ I+KLG+++++ +Q +++ MYS CG R+FD + R+ V+W +
Sbjct: 212 LEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTM 271
Query: 117 VSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGASEFGYSIHCFALKIRI 176
+ +++N + + GL + +M +G P +F V+ C +G+ G IH +
Sbjct: 272 IVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDS 331
Query: 177 EKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGGYAHCGYGFEALNVVSS 236
+ + ++L+ Y GD+ A VF I + ++ WN++I G + G+G +A+ +
Sbjct: 332 LADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRR 391
Query: 237 ML-FEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECSISIVNALIDMYIKSS 295
+L D+YTF A+ + F G+ +HG + + E S+ + L+ MY K+
Sbjct: 392 LLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNR 451
Query: 296 GMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFILSGSRPNHVTFSILLR 355
+ A KVF+ M ++DV+ W + G S N F + +R + + S ++
Sbjct: 452 EAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG 511
Query: 356 QCGKLLDLDLGLQLQCLALHCGFLDEENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITT 415
C + L G CLA+ GF +V +L+ M+ + G E A ++F S ++
Sbjct: 512 ACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKC 571
Query: 416 WNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVETCCRS----ENQQMVGQIH 471
WN +L Y + L F I E+G + T+ ++ C + + + Q+
Sbjct: 572 WNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK 631
Query: 472 GAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEF-------SNGAERLDMASWGAMMSAL 524
IK GF Y C ++ G +D + E +N AE W ++SA
Sbjct: 632 EQGIKAGFKH--YSC--MVNLVSKAGLVDEALELIEQSPPGNNQAEL-----WRTLLSAC 682
Query: 525 VH 526
V+
Sbjct: 683 VN 684
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 149/318 (46%), Gaps = 3/318 (0%)
Query: 43 DPIFLAKSLSLS--ENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
DP S+ L+ L S LG +H I+ D+ L N L+ MY CG
Sbjct: 297 DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFY 356
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDM-KTNGFMPNEFAVGSVMKVCVSMG 159
VF + NLVSW I+S +NG + + MY + + + P+E+ + +
Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPE 416
Query: 160 ASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIG 219
G +H K+ E++ FVG ++L+ Y K + +A++VF + DV W MI
Sbjct: 417 RFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIV 476
Query: 220 GYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVEC 279
G++ G A+ M E D ++ + + CS +A G H L IR+ +C
Sbjct: 477 GHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDC 536
Query: 280 SISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHKFI 339
+S+ AL+DMY K+ + A +F ++ D+ WN++ G +S++ + S F + +
Sbjct: 537 VMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQIL 596
Query: 340 LSGSRPNHVTFSILLRQC 357
+G P+ VT+ LL C
Sbjct: 597 ENGFMPDAVTYLSLLAAC 614
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 134/289 (46%), Gaps = 2/289 (0%)
Query: 41 RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLR 100
R D + ++S + + V G +HG + KLG+ +F+ L++MY K +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 101 VFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSMGA 160
VFD M ER++V WT ++ + G ++ ++ +++M + F++ SV+ C M
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 161 SEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMIGG 220
G HC A++ + V ++++ Y K G AE +F S+ D+ CWN+M+G
Sbjct: 519 LRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGA 578
Query: 221 YAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLIIRSEVECS 280
Y+ G +AL+ +L G D T+++ L CS G+ + + ++
Sbjct: 579 YSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAG 638
Query: 281 ISIVNALIDMYIKSSGMDYAFKVFERM--ADKDVISWNTLFGGFSENKN 327
+ ++++ K+ +D A ++ E+ + W TL +N
Sbjct: 639 FKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRN 687
Score = 41.2 bits (95), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 26 HRLCGNNQFCSDSFL-------RKDPIFLAKSLSLSENLKSRVLGTQVHGHIVKLGFTND 78
H GN++ F+ R D L+ + ++ G H ++ GF
Sbjct: 478 HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 79 IFLQNNLIAMYSKCGYFGWGLRVFDEMAERNLVSWTLIVSAAIQNGEFDMGLKMYVDMKT 138
+ + L+ MY K G + +F + +L W ++ A Q+G + L + +
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 139 NGFMPNEFAVGSVMKVCVSMGAS 161
NGFMP+ S++ C G++
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGST 620
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 263 bits (671), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/500 (30%), Positives = 266/500 (53%), Gaps = 6/500 (1%)
Query: 266 RQIHGLIIRSEVECSISIVNALIDMYIKSSGMDYAFKVFERMA--DKDVISWNTLFGGFS 323
+Q+H +I E + + ++L + YI+S+ +D+A F R+ ++ SWNT+ G+S
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 324 ENKN--PGQTASLFHKFILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGFLDE 381
++K L+++ + ++ C L L+ G+ + LA+ G +
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKD 143
Query: 382 ENVTSSLIYMFCRCGAVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWE 441
+ V SL+ M+ + G +E A VFD + +N W L+ GY D +V + FC + +
Sbjct: 144 DYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRD 203
Query: 442 SGVEVNGCTFFYVVETCCRSENQQMVGQIHGAIIKTGF-SSCGYICSSLIKSYVNFGQLD 500
+G+ ++ T +V+ C ++ +HG I+ F Y+ +S+I YV LD
Sbjct: 204 TGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLD 263
Query: 501 NSFEFSNGAERLDMASWGAMMSALVHQGHNHEAVTIFHSLVEAGEKPDEYILGTILNSCA 560
N+ + + ++ W ++S EA +F ++ P++ L IL SC+
Sbjct: 264 NARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS 323
Query: 561 AIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQSFNSNDVIVYN 620
++G+ + KS+H ++I+ G + ++ ID YA+CG+I+ AR FD N VI ++
Sbjct: 324 SLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERN-VISWS 382
Query: 621 TLIMAYAHHGLVSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVDKGCLLFKSMDSQ 680
++I A+ +GL EA++ F KMK N+ P+ TFVS++SACSH G V +G F+SM
Sbjct: 383 SMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRD 442
Query: 681 YGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPSPTVYRSLLSGCRIHGNKELGEW 740
YG+ P + Y C+VD+L R G + +AK I+ MP +P + + +LLS CRIH +L
Sbjct: 443 YGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGE 502
Query: 741 ASEKLLLLLPKNDAAHVLLS 760
+EKLL + P+ + +VLLS
Sbjct: 503 IAEKLLSMEPEKSSVYVLLS 522
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 235/495 (47%), Gaps = 22/495 (4%)
Query: 44 PIFLAKSL-SLSENLKSRVLGTQVHGHIVKLGFTNDIFLQNNLIAMYSKCGYFGWGLRVF 102
P+ A++L ++ K+ QVH ++ GF +++ L ++L Y + + F
Sbjct: 3 PVNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSF 62
Query: 103 DEMA--ERNLVSWTLIVSAAIQNGE--FDMGLKMYVDMKTNGFMPNEFAVGSVMKVCVSM 158
+ + +RN SW I+S ++ + L +Y M+ + + F + +K CV +
Sbjct: 63 NRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGL 122
Query: 159 GASEFGYSIHCFALKIRIEKNPFVGCSVLNFYAKLGDVAAAERVFYSISSDDVGCWNAMI 218
G E G IH A+K ++K+ +V S++ YA+LG + +A++VF I + W ++
Sbjct: 123 GLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLM 182
Query: 219 GGYAHCGYGFEALNVVSSMLFEGITMDKYTFINALQGCSLVADFDIGRQIHGLII-RSEV 277
GY E + M G+ +D T I ++ C V +G+ +HG+ I RS +
Sbjct: 183 KGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 278 ECSISIVNALIDMYIKSSGMDYAFKVFERMADKDVISWNTLFGGFSENKNPGQTASLFHK 337
+ S + ++IDMY+K +D A K+FE D++V+ W TL GF++ + + LF +
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 338 FILSGSRPNHVTFSILLRQCGKLLDLDLGLQLQCLALHCGF-LDEENVTSSLIYMFCRCG 396
+ PN T + +L C L L G + + G +D N T S I M+ RCG
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT-SFIDMYARCG 361
Query: 397 AVEMAHSVFDNVSYKNITTWNELLSGYCFNCCDADVLKTFCNIWESGVEVNGCTFFYVVE 456
++MA +VFD + +N+ +W+ +++ + N + L F + V N TF ++
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Query: 457 TCCRSENQ-------QMVGQIHGAIIKTGFSSCGYICSSLIKSYVNFGQLDNSFEFSNGA 509
C S N + + + +G + + +C ++ G++ + F +
Sbjct: 422 ACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC------MVDLLGRAGEIGEAKSFIDNM 475
Query: 510 ERLDMAS-WGAMMSA 523
MAS WGA++SA
Sbjct: 476 PVKPMASAWGALLSA 490
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 552 LGTILNSCAAIGAYQRTKSIHPFVIKLGFNTEVYVASAVIDAYAKCGDIKGARMAFDQ-S 610
L TIL+ + T+ +H VI GF EV + S++ +AY + + A +F++
Sbjct: 10 LLTILSQAKTL---NHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIP 66
Query: 611 FNSNDVIVYNTLIMAYAHHGL--VSEAMEIFDKMKLANLQPSQATFVSVMSACSHKGLVD 668
+ +NT++ Y+ S+ + ++++M+ V + AC GL++
Sbjct: 67 CWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLE 126
Query: 669 KGCLLFKSMDSQYGMQPSPDCYGCLVDMLSRNGYLEDAKHVIEIMPFQPS 718
G +L + + G+ LV+M ++ G +E A+ V + +P + S
Sbjct: 127 NG-ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 287,176,392
Number of Sequences: 539616
Number of extensions: 11879635
Number of successful extensions: 40276
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 30046
Number of HSP's gapped (non-prelim): 3029
length of query: 796
length of database: 191,569,459
effective HSP length: 126
effective length of query: 670
effective length of database: 123,577,843
effective search space: 82797154810
effective search space used: 82797154810
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)