BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036294
(833 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224118814|ref|XP_002317913.1| predicted protein [Populus trichocarpa]
gi|222858586|gb|EEE96133.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/831 (67%), Positives = 654/831 (78%), Gaps = 51/831 (6%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLK-PFS-----SLRTN 54
M TT+KLTELP R T S L S K +FQ LK PFS SLRTN
Sbjct: 1 MTFTTAKLTELPLR---------TTSTLPLSSHSLLSKIATFQSLKKPFSTATSSSLRTN 51
Query: 55 QNPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPR 114
+ P+T +N + PS N S PPS + K P
Sbjct: 52 KTPKTQQKNPNWISKWKPS------QNHSIKNPPSEVSQEK-----------------PH 88
Query: 115 YSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEE-EEDDINGAA-TGEERLEDLLRREWV 172
Y S++KG+NAIERIVLRLRNLGLGSDDE+E E E +ING TGEERL DLL+REWV
Sbjct: 89 YF-SNDKGQNAIERIVLRLRNLGLGSDDEDELEGLEGSEINGGGLTGEERLGDLLKREWV 147
Query: 173 RPNTVLREVE--GEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230
RP+TV+ + + D+S+LPWEREE + G +G R+RR KAPTLAELTIEDEE
Sbjct: 148 RPDTVVFSNDEGSDSDESVLPWEREERGAVEMEGGIESG--RKRRGKAPTLAELTIEDEE 205
Query: 231 LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290
LRRLRR GM++RERI++PKAG+T V+ IHD+WRK+ELVRLKFHEVLA DMKTAHEIVE
Sbjct: 206 LRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVE 265
Query: 291 RRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVD--- 347
RRTGGLVIWRAGSVMVV+RG NY GP SK QP D +GD LFVP VSSTD RS +
Sbjct: 266 RRTGGLVIWRAGSVMVVFRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIAT 325
Query: 348 ---EKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGY 404
EKS++ +RI + ++ MTEEEAE NSLLD LGPRF+EWWGTG+LPVDADLLPPKV Y
Sbjct: 326 SSSEKSKLVMRITEPTENMTEEEAELNSLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCY 385
Query: 405 KTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAK 464
KTPFRLLP GMR+RLTNAEMT++R+LA++LPCHFALGRNRNHQGLAVAILKLWEKSLVAK
Sbjct: 386 KTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAK 445
Query: 465 IAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAK 524
IAVKRGIQNTNNKLMA+ELK LTGG LL RNK+YIV++RGKDFLP +VA+ALAER++ K
Sbjct: 446 IAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEVTK 505
Query: 525 QIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKA 584
QIQDVEE+VRS ++EA PSGE EG+A AGTLAEFYEAQ RWGR++S EEREKM+EEASKA
Sbjct: 506 QIQDVEERVRSNSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKA 565
Query: 585 KHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLR 644
K ARLVKR EHKLA++QAKKLRAE LL+KIE +MVPSGPD+DQETI++EER MFRRVGLR
Sbjct: 566 KTARLVKRTEHKLAIAQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLR 625
Query: 645 MKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAI 704
MKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VEDTA+LLEYESGG+L+AI
Sbjct: 626 MKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAI 685
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQ 764
ERVPKGFALI+YRGKNYRRPIS+RPRNLLTKAKALKRSVAMQRHEALSQHI +LE IE+
Sbjct: 686 ERVPKGFALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEE 745
Query: 765 MKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADE 815
M KE+G+SK+EE+ N S + ++VS L Q+ED + ++ D + + +E
Sbjct: 746 MVKEMGLSKEEENENNWSSEEHAPLNNVSKLTQSEDKAFFTESDSEDDYNE 796
>gi|297734212|emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 1031 bits (2667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/858 (66%), Positives = 659/858 (76%), Gaps = 60/858 (6%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFSSLRTN-----Q 55
MA T+KLTE PF TSHS+ SL H F KTP LLKPFSSLRT +
Sbjct: 1 MAFATAKLTEFPF------TSHSS-SL-HFLFP----KTP-LSLLKPFSSLRTTDSNNLR 47
Query: 56 NPRT-------DSQNQQFPKPRSPSTSA-PWLNNWSRPKPPSTENANKLGGRNQIDEKQT 107
N +T D QN + +P++S W+N W P P S E+ +K ID K
Sbjct: 48 NRKTKRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNP-SIESEHK-----GIDSKGR 101
Query: 108 SPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEE--EGEEEEDDINGAATGEERLED 165
+ RY D G +AIERIVLRLRNLGLGSDDE+ EGE E D TG+E+L D
Sbjct: 102 D-GTESRYFDG-RSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTM-PVTGDEKLGD 158
Query: 166 LLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELT 225
LL+R+WVRP+++L E E +EDD +LPWER EE G G +RR ++APTLAELT
Sbjct: 159 LLQRDWVRPDSMLIEDE-DEDDMILPWERGEERQEEEGD----GRLKRRAVRAPTLAELT 213
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
IEDEELRRLRR GM +RERINVPKAG+TQ V+ KIH+KWRK+ELVRLKFHE LA DMKTA
Sbjct: 214 IEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTA 273
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARS 345
HEIVERRTGGLV WR+GSVMVV+RG NY GP KPQP+DG+GD+LFVP VSS D R+
Sbjct: 274 HEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRN 332
Query: 346 VD------EKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399
+ EK +PVR H++ MTEEEAE NSLLD LGPRF +WWGTG+LPVD DLLP
Sbjct: 333 DNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQ 392
Query: 400 KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459
+ GYKTP R+LPTGMR RLTNAEMT+LR+LA+SLPCHFALGRNRNHQGLA AI+KLWEK
Sbjct: 393 SIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEK 452
Query: 460 SLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAER 519
S+V KIAVK GIQNTNNKLMAEE+K+LTGG LL RNK+YIV+YRGKDFLP +VA+AL+ER
Sbjct: 453 SIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSER 512
Query: 520 EQCAKQIQDVEEKVRSKTLEATPSGETE-GQAPAGTLAEFYEAQKRWGREVSAEEREKMV 578
E+ K IQ VEEKVR+ EA PSGE GQ AGTLAEFYEAQ RWGRE+SAEE EKM+
Sbjct: 513 EELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMI 572
Query: 579 EEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMF 638
EEAS+AK AR+VKRIEHKLA++QAKKLRAERLLAKIEASM+P+GP DQETITDEER MF
Sbjct: 573 EEASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMF 632
Query: 639 RRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESG 698
RR+GLRMKA+L LG+RGVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VEDTARLLEYESG
Sbjct: 633 RRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESG 692
Query: 699 GILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
GIL+AIERVPKG+ALI+YRGKNYRRP+SLRPRNLLTKAKALKRSVAMQRHEALSQHIS+L
Sbjct: 693 GILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISEL 752
Query: 759 ENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSD------EDFDSE 812
E TIEQMK EIG SKD ED + + QFD VS ++ED+ D ED D +
Sbjct: 753 ERTIEQMKMEIGDSKDAEDKDSWSTEGHGQFDQVS---ESEDEASGMDSDADDVEDIDWK 809
Query: 813 ADEDSELSSFESDDNDLS 830
DE+S +S F++ D DLS
Sbjct: 810 DDEESGISRFKNHD-DLS 826
>gi|147815878|emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 570/875 (65%), Positives = 659/875 (75%), Gaps = 74/875 (8%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFSSLRTN-----Q 55
MA T+KLTE PF TSHS+ SL H F KTP LLKPFSSLRT +
Sbjct: 1 MAFATAKLTEFPF------TSHSS-SL-HFLFP----KTP-LSLLKPFSSLRTTDSNNLR 47
Query: 56 NPRT-------DSQNQQFPKPRSPSTSA-PWLNNWSRPKPPSTENANKLGGRNQIDEKQT 107
N +T D QN + +P++S W+N W P P S E+ +K ID K
Sbjct: 48 NRKTKRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNP-SIESEHK-----GIDSKGR 101
Query: 108 SPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEE--EGEEEEDDINGAATGEERLED 165
+ RY D G +AIERIVLRLRNLGLGSDDE+ EGE E D TG+E+L D
Sbjct: 102 D-GTESRYFDG-RSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTM-PVTGDEKLGD 158
Query: 166 LLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELT 225
LL+R+WVRP+++L E E +EDD +LPWER EE G G +RR ++APTLAELT
Sbjct: 159 LLQRDWVRPDSMLIEDE-DEDDMILPWERGEERQEEEGD----GRLKRRAVRAPTLAELT 213
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
IEDEELRRLRR GM +RERINVPKAG+TQ V+ KIH+KWRK+ELVRLKFHE LA DMKTA
Sbjct: 214 IEDEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTA 273
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARS 345
HEIVERRTGGLV WR+GSVMVV+RG NY GP KPQP+DG+GD+LFVP VSS D R+
Sbjct: 274 HEIVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRN 332
Query: 346 VD------EKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399
+ EK +PVR H++ MTEEEAE NSLLD LGPRF +WWGTG+LPVD DLLP
Sbjct: 333 DNNGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQ 392
Query: 400 KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459
+ GYKTP R+LPTGMR RLTNAEMT+LR+LA+SLPCHFALGRNRNHQGLA AI+KLWEK
Sbjct: 393 SIPGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEK 452
Query: 460 SLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAER 519
S+V KIAVK GIQNTNNKLMAEE+K+LTGG LL RNK+YIV+YRGKDFLP +VA+AL+ER
Sbjct: 453 SIVVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSER 512
Query: 520 EQCAKQIQDVEEKVRSKTLEATPSGETE-GQAPAGTLAEFYEAQKRWGREVSAEEREKMV 578
E+ K IQ VEEKVR+ EA PSGE GQ AGTLAEFYEAQ RWGRE+SAEE EKM+
Sbjct: 513 EELTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMI 572
Query: 579 EEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMF 638
EEAS+AK AR+VKRIEHKLA++QAKKLR ERLLAKIEASM+P+GP DQETITDEER MF
Sbjct: 573 EEASRAKSARVVKRIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMF 632
Query: 639 RRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESG 698
RR+GLRMKA+L LG+RGVFDGV+ENMHLHWK+RELVKLI+KQKTLA+VEDTARLLEYESG
Sbjct: 633 RRLGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESG 692
Query: 699 GILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
GIL+AIERVPKG+ALI+YRGKNYRRP+SLRPRNLLTKAKALKRSVAMQRHEALSQHIS+L
Sbjct: 693 GILVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISEL 752
Query: 759 ENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHV-------------------SVLPQNE 799
E TIEQMK EIG SKD ED + + QFD V S+L ++E
Sbjct: 753 ERTIEQMKMEIGDSKDAEDKDSWSTEGHGQFDQVSEVSKVRYSVFCCQIFLVASILSEDE 812
Query: 800 ----DDDYVSDEDFDSEADEDSELSSFESDDNDLS 830
D D ED D + DE+S +S F++ D DLS
Sbjct: 813 ASGMDSDADDVEDIDWKDDEESGISRFKNHD-DLS 846
>gi|255582755|ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/768 (69%), Positives = 616/768 (80%), Gaps = 44/768 (5%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLL-KPFSSLRTNQNPRT 59
++ TT++LTELP RNSL L FSS + K PSF L +PFSS ++ + +
Sbjct: 3 LSTTTARLTELPLRNSLPL------------FSSKTPKKPSFHPLNRPFSSSSSSSSSSS 50
Query: 60 DSQNQQFPKPRSPSTSAPWLNNW---SRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYS 116
Q PKP +P + PWL+ W S P PP+ + + KL +I S
Sbjct: 51 SLGTNQNPKPNNPKS--PWLSKWAPHSSP-PPTVKTSPKLAQDKKIQ------------S 95
Query: 117 DSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDING----AATGEERLEDLLRREWV 172
+ +KG+NAIERIVLRLRNLGLGSDDEEE + E NG A TGEERL DLL+REWV
Sbjct: 96 LTKDKGQNAIERIVLRLRNLGLGSDDEEEEGDMEYKPNGGDSIAVTGEERLADLLQREWV 155
Query: 173 RPNTVLREVEGEEDDS--LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230
RP+T+ + + E+D+ +LPWER+E+ E+ RRR +KAPTLAELTIEDEE
Sbjct: 156 RPDTIFIKDDEEDDNDDLVLPWERKEKVRREGEKEE-GERERRRVVKAPTLAELTIEDEE 214
Query: 231 LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290
LRRLRR GM+LRER+NVPKAGLT++V+ KIHDKWRK+ELVRLKFHEVLA DMKTAHEI E
Sbjct: 215 LRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEITE 274
Query: 291 RRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGST------AR 344
RRTGGLVIWRAGSVMVVYRG++Y GP SK QP++ +GD LF+P VSS T A
Sbjct: 275 RRTGGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKGDNVAP 334
Query: 345 SVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGY 404
S EK E+ +R LDHSK MTEEE E +S LDSLGPRF+EWWGTGILPVDADLLPPK+ Y
Sbjct: 335 SAAEKRELAMRRLDHSKDMTEEEIEYDSFLDSLGPRFEEWWGTGILPVDADLLPPKIPDY 394
Query: 405 KTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAK 464
KTPFRLLPTGMRSRLTNAEMT+LR+LA+ LPCHFALGRNRNHQGLA ILK+WEKSLVAK
Sbjct: 395 KTPFRLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALGRNRNHQGLASTILKVWEKSLVAK 454
Query: 465 IAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAK 524
IAVKRGIQNTNNKLMA+ELK LTGG LL RNK+YIV+YRGKDFLP +VA+AL ER++ K
Sbjct: 455 IAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALTERQELTK 514
Query: 525 QIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKA 584
+IQDVEEKVRS+ +EA PS E EG+ AGTLAEFYEAQ RWG++ SAE+REKM+E+ ++A
Sbjct: 515 KIQDVEEKVRSREIEAVPSKEEEGKPLAGTLAEFYEAQSRWGKDTSAEDREKMIEDDTRA 574
Query: 585 KHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLR 644
K AR+VKRIEHKLAV+QAKKLRAERLLAKIE SM+PSGPDYDQETITDEERA+FRR+GLR
Sbjct: 575 KRARIVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPSGPDYDQETITDEERAVFRRIGLR 634
Query: 645 MKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAI 704
MKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTLA+ EDTARLLEYESGGIL+AI
Sbjct: 635 MKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFAEDTARLLEYESGGILVAI 694
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALS 752
ERVPKGFALI+YRGKNYRRPI+LRPRNLLTKAKALKRSVAMQRHE S
Sbjct: 695 ERVPKGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHEVSS 742
>gi|297830494|ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
Length = 846
Score = 965 bits (2495), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/798 (64%), Positives = 620/798 (77%), Gaps = 35/798 (4%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPS----LNHLPFSSSSRKTPSFQLLKPFSSLRTNQN 56
MAL TE+P R+SL LTS S L+ L F S + K Q+++PF SLRT++
Sbjct: 1 MALVPLNFTEMPLRSSLPLTSSSRYCSSPSLHALLFYSLAAKPSRHQIIRPFFSLRTSER 60
Query: 57 PRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPST-----ENANKLGGRN----QIDEKQT 107
S N + R+ + PW++ W PPS+ ++A K GG N +I +
Sbjct: 61 SNNRSNNNRRVDQRNHKPTPPWIDKW----PPSSAGVGGDHAGKRGGENNGGDKIRSAEE 116
Query: 108 SPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDD-INGA----ATGEER 162
++ RY + D KG+NAIERIVLRLRNLGLGSDDEE+ E+EE ING TGEER
Sbjct: 117 EAEAKLRYLERD-KGQNAIERIVLRLRNLGLGSDDEEDVEDEEGGGINGGDVKPVTGEER 175
Query: 163 LEDLLRREWVRPNTVLREVEGEEDDS--LLPWEREEEENL--RAGGEKPAGETRRRRMKA 218
L DLL+REWVRP+ +L E E E++ LLPWE+ EEE R GE ++ R +A
Sbjct: 176 LGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVEGEGGVAVMKKGRARA 235
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+LAELT+ED ELRRLRR+GMYLR RIN+PKAGLTQ VM KI+D WRK+ELVRLKFHEVL
Sbjct: 236 PSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFHEVL 295
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSST 338
A DMKTAHEIVERRTGG+VIWRAGSVMVVYRG +Y GP + G +TLFVP VSS
Sbjct: 296 ARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDVSSA 355
Query: 339 DGSTARSVDEKSEVPVRILD-------HSKPMTEEEAECNSLLDSLGPRFQEWWGTGILP 391
G A + + P I D + MTEEEAE NSLLDSLGPRFQEWWGTG+LP
Sbjct: 356 -GDEATNAKDNQSPPSEIKDPIIKNPIRKENMTEEEAEFNSLLDSLGPRFQEWWGTGVLP 414
Query: 392 VDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAV 451
VDADLLPP + GYKTPFRLLPTGMRS LTNAEMT+LR++ ++LPCHFALGRNRNHQGLA
Sbjct: 415 VDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQGLAA 474
Query: 452 AILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPN 511
AIL++WEKSL+AKIAVKRGIQNTNNKLMA+E+K+LTGG LL RNK+YIV+YRGKDFLP +
Sbjct: 475 AILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKALTGGVLLLRNKYYIVIYRGKDFLPSS 534
Query: 512 VASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSA 571
VA+ LAER++ K+IQDVEE+VR++ +EA + A AGTLAEFYEAQ RWG+E++
Sbjct: 535 VAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKEITP 594
Query: 572 EEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETIT 631
+ REKM+EEAS+ +AR+VKRI+HKL ++Q+K RAE+LL+KIEASM+P+GPDYDQE I+
Sbjct: 595 DHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQEVIS 654
Query: 632 DEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTAR 691
+EERAMFR+VGL+MKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQK LA+VEDTAR
Sbjct: 655 EEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKNLAFVEDTAR 714
Query: 692 LLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL 751
LLEYESGG+L+AIE+VPKGFALI+YRGKNYRRPISLRPRNLLTKAKALKRS+AMQRHEAL
Sbjct: 715 LLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRHEAL 774
Query: 752 SQHISDLENTIEQMKKEI 769
SQHIS+LE TIEQM+ E+
Sbjct: 775 SQHISELERTIEQMQSEL 792
>gi|15229636|ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product [Arabidopsis thaliana]
gi|17380904|gb|AAL36264.1| unknown protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 963 bits (2490), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/801 (63%), Positives = 617/801 (77%), Gaps = 41/801 (5%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPS----LNHLPFSSSSRKTPSFQLLKPFSSLRTNQN 56
MAL TE+P R+SL LTS S L+ L F S K Q+++PFSSLRT++
Sbjct: 1 MALAPLNFTEMPLRSSLPLTSSSRYCSSPSLHALLFYSLGVKPSRQQIVRPFSSLRTSER 60
Query: 57 PRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGG------------RNQIDE 104
S N + R+ + PW++ W PPS+ A GG ++I
Sbjct: 61 SNNRSNNNRRLDQRNHKPTPPWIDKW----PPSSSGA---GGDHAGKKGGENNGGDRIRS 113
Query: 105 KQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDD-INGA----ATG 159
+ ++ RY + D KG+NAIERIVLRLRNLGLGSDDE++ E++E ING TG
Sbjct: 114 AEEEAEAKLRYLEKD-KGQNAIERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVKPVTG 172
Query: 160 EERLEDLLRREWVRPNTVLREVEGEEDDS--LLPWEREEEENL--RAGGEKPAGETRRRR 215
EERL DLL+REWVRP+ +L E E E++ LLPWE+ EEE R GE ++RR
Sbjct: 173 EERLGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQKRR 232
Query: 216 MKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFH 275
+AP+LAELT+ED ELRRLRR+GMYLR RIN+PKAGLTQ VM KI+D WRK+ELVRLKFH
Sbjct: 233 ARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLKFH 292
Query: 276 EVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHV 335
EVLA DMKTAHEIVERRTGG+VIWRAGSVMVVYRG +Y GP + G +TLFVP V
Sbjct: 293 EVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVPDV 352
Query: 336 SSTDGSTARSVDEKSEVPVRILD-------HSKPMTEEEAECNSLLDSLGPRFQEWWGTG 388
SS G A + + P+ I D + MTEEE E NSLLDSLGPRFQEWWGTG
Sbjct: 353 SSA-GDEATNAKDNQSAPLVIKDPIIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWWGTG 411
Query: 389 ILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQG 448
+LPVDADLLPP + GYKTPFRLLPTGMRS LTNAEMT+LR++ ++LPCHFALGRNRNHQG
Sbjct: 412 VLPVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQG 471
Query: 449 LAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFL 508
LA AIL++WEKSL+AKIAVKRGIQNTNNKLMA+E+K+LTGG LL RNK+YIV+YRGKDFL
Sbjct: 472 LAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGKDFL 531
Query: 509 PPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGRE 568
P +VA+ LAER++ K+IQDVEE+VR++ +EA + A AGTLAEFYEAQ RWG+E
Sbjct: 532 PSSVAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGKE 591
Query: 569 VSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQE 628
++ + REKM+EEAS+ +AR+VKRI+HKL ++Q+K RAE+LL+KIEASM+P+GPDYDQE
Sbjct: 592 ITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQE 651
Query: 629 TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVED 688
I++EERAMFR+VGL+MKA+LP+GIRGVFDGV+ENMHLHWK+RELVKLI+KQK A+VE+
Sbjct: 652 VISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAFVEE 711
Query: 689 TARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRH 748
TARLLEYESGG+L+AIE+VPKGFALI+YRGKNYRRPISLRPRNLLTKAKALKRS+AMQRH
Sbjct: 712 TARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQRH 771
Query: 749 EALSQHISDLENTIEQMKKEI 769
EALSQHIS+LE TIEQM+ ++
Sbjct: 772 EALSQHISELERTIEQMQSQL 792
>gi|356529577|ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 791
Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/833 (62%), Positives = 633/833 (75%), Gaps = 58/833 (6%)
Query: 5 TSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQ 64
T KL+EL F +S +H S PF + + F+SL
Sbjct: 6 TCKLSELSFNSSFASLNHPHSSFRKFPFRTLT-----------FASL------------- 41
Query: 65 QFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRN 124
P P+ P+ SAPWL K PS + A E + D P D K +N
Sbjct: 42 --PTPK-PNPSAPWLT-----KSPSPKRAV---------EPLPAGDPTP-----DRKPQN 79
Query: 125 AIERIVLRLRNLGLGSDDEEEGEEEEDDINGA----ATGEERLEDLLRREWVRPNTVLR- 179
A++RIVLRLRNLGL S++EE+ +E E++I TGEERL +LL+REWVRP+ VL
Sbjct: 80 AVDRIVLRLRNLGLPSEEEEQEQEHEEEIPATNPAPVTGEERLGELLQREWVRPDAVLVG 139
Query: 180 EVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGM 239
E + EE++ +LPWER+EEE + G ++RR++AP+LA+LT+EDE LRRLRR GM
Sbjct: 140 EDDDEEEEMMLPWERDEEEKEVVVVSE-EGLLKKRRVRAPSLADLTLEDELLRRLRREGM 198
Query: 240 YLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIW 299
+RER++VPKAGLT++VM KIH +WRK+ELVRLKFHE LA DM+ AHEIVERRTGGLV W
Sbjct: 199 RVRERVSVPKAGLTEEVMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTW 258
Query: 300 RAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDH 359
R+GSVM+VYRG +Y GP S+ + + GD FVP VS + STA S EKSEV VR +H
Sbjct: 259 RSGSVMMVYRGIDYQGPDSRKELNEKKGDGFFVPDVSKREDSTATSTSEKSEVVVREREH 318
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
+ M+E EAE N+LLD LGPRF WWGTGILPVDADLLP V GYKTPFRLLPTGMRSRL
Sbjct: 319 PENMSEAEAEYNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRL 378
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
TNAEMT+LR+LA+SLPCHFA+GRNRNHQGLA AILKLWEKSLV+KIAVKRGIQNTNN+LM
Sbjct: 379 TNAEMTNLRKLAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELM 438
Query: 480 AEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLE 539
AEELK LTGGTLL RNK++IV+YRGKDF+P +VA+ LAERE+ KQ+QDVE+KVR + ++
Sbjct: 439 AEELKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVD 498
Query: 540 ATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAV 599
A PSG+ E A AGTLAEFYEAQ RWGRE+S +EREKM+EEA+KAK A+LV++IEHK+ +
Sbjct: 499 AIPSGQGEATAQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFI 558
Query: 600 SQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDG 659
+Q KKLRAE+LLAKIEASMVP+GPDYDQETITDEER MFR+VGLRMK +LPLGIRGVFDG
Sbjct: 559 AQTKKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDG 618
Query: 660 VVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGK 719
VVENMHLHWK+RELVKL+TKQKTLA+VEDTARLLEYESGGIL+AIE+V K FALI+YRGK
Sbjct: 619 VVENMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGK 678
Query: 720 NYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDE--ED 777
NY+RPI+LRPRNLLTK KALKR VAMQRHEALSQHI++LE TIEQMKKE+G+++D ED
Sbjct: 679 NYKRPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKELGMTQDSDVED 738
Query: 778 GNIRCSGDLKQFDHVSVLPQNEDDD---YVSDEDFDSEADEDSELSSFESDDN 827
G D Q D +S L +ED+D Y +ED D + E SE S F +D++
Sbjct: 739 GGSIEEDDHNQID-ISELALSEDEDSDGYDDEEDSDWDDGEASEFSEFINDEH 790
>gi|356522763|ref|XP_003530015.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 734
Score = 940 bits (2430), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/712 (69%), Positives = 578/712 (81%), Gaps = 25/712 (3%)
Query: 66 FPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNA 125
P P+ P+ SAPWL K PS + A E T+ D P D K N
Sbjct: 43 LPTPK-PNPSAPWLT-----KSPSPKRAT---------EPLTAGDPIP-----DKKPHNP 82
Query: 126 IERIVLRLRNLGLGSDDEEEGEEEEDDINGAA--TGEERLEDLLRREWVRPNTVLREVEG 183
+ERIVLRLRNLGL S++EE+ EEEE N A TGEERL +LLRREWVRP+ VL +
Sbjct: 83 VERIVLRLRNLGLPSEEEEQEEEEEIPANNPAPVTGEERLGELLRREWVRPDAVLVGEDD 142
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
E++ +LPWEREEE+ + + G ++RR++AP+LA+LT+EDE LRRLRR GM +RE
Sbjct: 143 GEEEMILPWEREEEKEVVVVVSE-EGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRE 201
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
R++VPKAGLTQ+VM KIH +WRK+ELVRLKFHE LA DM+ AHEIVERRTGGLV WR+GS
Sbjct: 202 RVSVPKAGLTQEVMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGS 261
Query: 304 VMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSS-TDGSTARSVDEKSEVPVRILDHSKP 362
VM+VYRG +Y GP S+ + + GD FVP VS D STA S EKSEV VR +H +
Sbjct: 262 VMMVYRGIDYQGPDSQKEVNEKKGDGFFVPDVSKREDSSTATSTSEKSEVVVREREHPEN 321
Query: 363 MTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNA 422
M+E EAE N+LLD LGPRF WWGTGILPVDADLLP V GYKTPFRLLPTGMRSRLTNA
Sbjct: 322 MSEAEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNA 381
Query: 423 EMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEE 482
EMT+LR+LA+SLPCHFALGRNRNHQGLA AILKLWEKSLVAKIAVKRGIQNTNN+LMAEE
Sbjct: 382 EMTNLRKLAKSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEE 441
Query: 483 LKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATP 542
LK LTGGTLL RNK++IV+YRGKDF+P +VA+ LAERE+ KQ+QDVE+KVR + ++A P
Sbjct: 442 LKMLTGGTLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIP 501
Query: 543 SGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQA 602
G+ E A AGTLAEFYEAQ RWGRE+S EEREKMVEEA+K K A+LV++IEHK+ ++Q
Sbjct: 502 LGQGEATAQAGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQT 561
Query: 603 KKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVE 662
KKLRAE+LLAKIEASMVP+GPDYDQETITDEER MFR+VGLRMK +LPLGIRGVFDGVVE
Sbjct: 562 KKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVE 621
Query: 663 NMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYR 722
NMHLHWK+RELVKL+TKQKT+A+VEDTARLLEYESGGIL+AIE+V K FALI+YRGKNY+
Sbjct: 622 NMHLHWKHRELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYK 681
Query: 723 RPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
RPI+LRPRNLLTK KALKR VAMQRHEALSQHI++LE TIEQMKKE+ VS D
Sbjct: 682 RPITLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL-VSMD 732
>gi|357500379|ref|XP_003620478.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355495493|gb|AES76696.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 820
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/769 (62%), Positives = 592/769 (76%), Gaps = 48/769 (6%)
Query: 21 SHSTPSLNHLPFSSSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPSTSAPWLN 80
S S+ +L+H F S +K PSF L FSSL+T SP+ + PWL
Sbjct: 32 SRSSFTLSHNHFLSHPKK-PSFPSLTTFSSLKTTHQ-------------SSPNPTPPWLT 77
Query: 81 -NWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLG 139
N S PK ++ E SP + K +N +ERIV RLRNLGL
Sbjct: 78 KNPSSPK--------------RVTE---SPIKDDPFQPQPQKPKNPVERIVFRLRNLGLV 120
Query: 140 SDDEEEGEEEEDDINGAA----TGEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWERE 195
+++E+ E+ ++++ + TG+E+L +LL+ +WVRP+ +L E E E++ ++PW+RE
Sbjct: 121 EEEDEQEEKVKEEVVKLSALKVTGDEKLSELLKIKWVRPDVLLDE-EDEDEKMVVPWKRE 179
Query: 196 EEENLRA----GGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAG 251
EE +R+ GG K G ++R +KAP+LAELT+EDE LRRLRR GM+LRER++VPKAG
Sbjct: 180 EEREMRSIDSGGGIKEEG-FKKRTLKAPSLAELTLEDELLRRLRREGMHLRERVSVPKAG 238
Query: 252 LTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGN 311
LTQ+VM KIH+ WRK ELVRLKFHE LA +M+ AH+IVERRTGGLV WRAGSVM+VYRG
Sbjct: 239 LTQEVMEKIHESWRKKELVRLKFHEELAKNMRIAHQIVERRTGGLVTWRAGSVMIVYRGK 298
Query: 312 NYAGPSSKPQPLDGDGDTLFVPHVSS-----TDGSTARSVDEKSEVPVRILDHSKPMTEE 366
NY GP+S P+ +GD FVP VSS T S A S E SE R ++ + MTEE
Sbjct: 299 NYQGPAS-PELDVKEGDGFFVPDVSSGSLSKTKDSNATSSLENSEQVGRNVELPEKMTEE 357
Query: 367 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTD 426
EAE N+LLD LGPRF WWGTGI PVDADLLP +V GYKTP+RLLPTGMRSRLT AEMTD
Sbjct: 358 EAEYNALLDDLGPRFVGWWGTGIPPVDADLLPREVPGYKTPYRLLPTGMRSRLTGAEMTD 417
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
LR++A+SLPCHFALGRNRNHQGLA AILKLWE+SL+AKIAVK GIQNTNNKLMA+EL +L
Sbjct: 418 LRKIAKSLPCHFALGRNRNHQGLACAILKLWERSLIAKIAVKPGIQNTNNKLMADELSTL 477
Query: 487 TGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGET 546
TGGTLL RN+FYIV+YRGKDF+P VA+ LAER++ KQ+QDVEEKVR K + ATPS +
Sbjct: 478 TGGTLLLRNRFYIVIYRGKDFVPTGVAAVLAERQELTKQVQDVEEKVRCKAVVATPSVQG 537
Query: 547 EGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
E APAG+LAEFYEAQ RWGR+VS+EE E+M++EA+KAK+ +LVK+IEHK++++ K R
Sbjct: 538 EATAPAGSLAEFYEAQARWGRDVSSEEHERMIKEATKAKNVKLVKQIEHKISLAANKLHR 597
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AERLLAKIE+SMVP GPDYDQETITDEER +FR++GLRMKA+L LGIRGVFDGV+ENMHL
Sbjct: 598 AERLLAKIESSMVPVGPDYDQETITDEERVVFRQIGLRMKAYLQLGIRGVFDGVIENMHL 657
Query: 667 HWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS 726
HWK+RELVKL+TKQK A+VEDTARLLEYESGGIL+AIE+V K FA+I+YRGKNY+RP++
Sbjct: 658 HWKHRELVKLVTKQKNRAFVEDTARLLEYESGGILVAIEKVSKEFAIIYYRGKNYKRPLT 717
Query: 727 LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDE 775
LRPRNLLTKAKALKRSVAM RHEALS HI++LE TIEQMK+E+G+S DE
Sbjct: 718 LRPRNLLTKAKALKRSVAMLRHEALSNHITELETTIEQMKQELGLSDDE 766
>gi|125553229|gb|EAY98938.1| hypothetical protein OsI_20893 [Oryza sativa Indica Group]
Length = 801
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/661 (66%), Positives = 524/661 (79%), Gaps = 17/661 (2%)
Query: 126 IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEE 185
I+RIV RLRNLGL SDD+E G ERL DLL R W RP+
Sbjct: 94 IDRIVHRLRNLGLASDDDEPAAAAATATA-PPDGNERLSDLLDRSWARPDQQF--AASSF 150
Query: 186 DDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERI 245
D+S+LPWER+E + G E +RRR++AP+LAELTIEDEELRRLRR GM LR+RI
Sbjct: 151 DESVLPWERDE---VARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRI 207
Query: 246 NVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVM 305
VPKAG+TQ V KIHD WRK ELVRLKFHE LA DMKTAHE+VERRTGGL+IWR+GSVM
Sbjct: 208 TVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVM 267
Query: 306 VVYRGNNYAGPSSKPQPLDGDGD-------TLFVPHVSS--TDGSTARSVDEKSEVPVRI 356
VVYRG+NY P K + LDG+ TLF+P SS S + V+ + E+ R+
Sbjct: 268 VVYRGSNYKRPL-KSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARL 326
Query: 357 -LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGM 415
+ +++ MTEEE E N +LD LGPRF +WWGTGILPVDADLLP + GYKTPFRLLPTGM
Sbjct: 327 NMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGM 386
Query: 416 RSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
R LTNAE+T+LR+LAR LPCHFALGRNRNHQGLA AI+KLWEKSLV KIAVKRGIQNTN
Sbjct: 387 RLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTN 446
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRS 535
NKLM+EE+K+LTGGTLL RNK+YIV+YRGKDFLP +VA+ALAERE+ K IQ+VEE+ R
Sbjct: 447 NKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRC 506
Query: 536 KTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEH 595
+ + +G A AGTLAEF EAQ RWGREV+A+E+E+M E +S++ +L KR+EH
Sbjct: 507 IPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEH 566
Query: 596 KLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRG 655
KL+++QAK RAERLL+KIEASMV + P D+E ITDEER++FRR+GLR+KA+LP+GIRG
Sbjct: 567 KLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRG 626
Query: 656 VFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIF 715
VFDGV+ENMHLHWK+RE+VKLITKQKTL +VE+TARLLEYESGGIL+AIERVPKG+ALIF
Sbjct: 627 VFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVPKGYALIF 686
Query: 716 YRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDE 775
YRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHEALSQHI++LEN I QMK ++G+ DE
Sbjct: 687 YRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDE 746
Query: 776 E 776
E
Sbjct: 747 E 747
>gi|47900539|gb|AAT39274.1| unknown protein [Oryza sativa Japonica Group]
gi|50878415|gb|AAT85189.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 798
Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/661 (66%), Positives = 523/661 (79%), Gaps = 17/661 (2%)
Query: 126 IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEE 185
I+RIV RLRNLGL SDD+E G ERL DLL R W RP+
Sbjct: 91 IDRIVHRLRNLGLASDDDEPTAAAATATA-PPDGNERLSDLLDRSWARPDQQF--AASSF 147
Query: 186 DDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERI 245
D+S+LPWER+E + G E +RRR++AP+LAELTIEDEELRRLRR GM LR+RI
Sbjct: 148 DESVLPWERDE---VARGRENEEDGVKRRRVRAPSLAELTIEDEELRRLRRLGMTLRDRI 204
Query: 246 NVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVM 305
VPKAG+TQ V KIHD WRK ELVRLKFHE LA DMKTAHE+VERRTGGL+IWR+GSVM
Sbjct: 205 TVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLIIWRSGSVM 264
Query: 306 VVYRGNNYAGPSSKPQPLDGDGD-------TLFVPHVSS--TDGSTARSVDEKSEVPVRI 356
VVYRG+NY P K + LDG+ TLF+P SS S + V+ + E+ R+
Sbjct: 265 VVYRGSNYKRPL-KSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQREIAARL 323
Query: 357 -LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGM 415
+ +++ MTEEE E N +LD LGPRF +WWGTGILPVDADLLP + GYKTPFRLLPTGM
Sbjct: 324 NMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPFRLLPTGM 383
Query: 416 RSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
R LTNAE+T+LR+LAR LPCHFALGRNRNHQGLA AI+KLWEKSLV KIAVKRGIQNTN
Sbjct: 384 RLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTN 443
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRS 535
NKLM+EE+K+LTGGTLL RNK+YIV+YRGKDFLP +VA+ALAERE+ K IQ+VEE+ R
Sbjct: 444 NKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNVEEQKRC 503
Query: 536 KTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEH 595
+ + +G A AGTLAEF EAQ RWGREV+A+E+E+M E +S++ +L KR+EH
Sbjct: 504 IPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEKLFKRLEH 563
Query: 596 KLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRG 655
KL+++QAK RAERLL+KIEASMV + P D+E ITDEER++FRR+GLR+KA+LP+GIRG
Sbjct: 564 KLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAYLPVGIRG 623
Query: 656 VFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIF 715
VFDGV+ENMHLHWK+RE+VKLITKQKTL +VE+TARLLEYESGGIL+AIERV KG+ALIF
Sbjct: 624 VFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVTKGYALIF 683
Query: 716 YRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDE 775
YRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHEALSQHI++LEN I QMK ++G+ DE
Sbjct: 684 YRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLDLGIEVDE 743
Query: 776 E 776
E
Sbjct: 744 E 744
>gi|356527819|ref|XP_003532504.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 719
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/709 (61%), Positives = 531/709 (74%), Gaps = 56/709 (7%)
Query: 120 NKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLR 179
+K NAIERI LRLRNLGL S + E+ D LRREW+RP
Sbjct: 64 HKATNAIERIALRLRNLGLASTTDLADAED---------------DFLRREWLRP----- 103
Query: 180 EVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGM 239
D +L PW++ +EE+ GE+ +++ + A TLAE T+ +EELRRLR GM
Sbjct: 104 ------DQALFPWDKGQEEDAEEPGEQQKEMLKKKNVNASTLAEQTLVEEELRRLRTLGM 157
Query: 240 YLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIW 299
L+E+I +PKAGLT+ V+ +IH W ELVRLKFHE LA +MK AH+IVE RT GLVIW
Sbjct: 158 SLKEKITIPKAGLTRAVLDRIHRHWSNCELVRLKFHEFLAQNMKLAHQIVEHRTRGLVIW 217
Query: 300 RAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDH 359
R+GS M VYRG NY GP ++ D ++ EKSE +
Sbjct: 218 RSGSYMWVYRGKNYQGP------VESDATSM-----------------EKSEA---VWWK 251
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
+ MT EEAE N +LD GPRF EWWGTGILPVDAD LPP V GYKTP RLLP GMR +L
Sbjct: 252 GENMTPEEAEFNRMLDGFGPRFVEWWGTGILPVDADSLPPMVPGYKTPLRLLPAGMRPQL 311
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
TN E+T++R+LA+SLPCHFALGRNRN QGLA AIL+LWEKSLVAKI VKRGI NTNN+LM
Sbjct: 312 TNDELTNMRKLAKSLPCHFALGRNRNLQGLASAILRLWEKSLVAKIGVKRGIVNTNNELM 371
Query: 480 AEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLE 539
A+ELK+LTGGTLL RNK+YIV+YRGKDF+P +VA+ +AER++ KQ+QDVEEKVR K L+
Sbjct: 372 AQELKALTGGTLLLRNKYYIVIYRGKDFVPTSVAAVIAERQELTKQVQDVEEKVRCKALD 431
Query: 540 ATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAV 599
+TPSGE E A AG+LAEFY AQ WGR++S EERE+M++E +KAK+A+LVK+IE KLAV
Sbjct: 432 STPSGEDESTAQAGSLAEFYVAQACWGRDISTEERERMMQEVAKAKNAKLVKKIECKLAV 491
Query: 600 SQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDG 659
+QAK+LRAE+LLAKIEAS++P GPDYD+ETITDEER MFR VGLRMKA+LPLGIRGVFDG
Sbjct: 492 AQAKRLRAEKLLAKIEASLLPVGPDYDKETITDEERVMFRSVGLRMKAYLPLGIRGVFDG 551
Query: 660 VVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGK 719
V+ENMHLHWK+RELVKLITKQKTLA+VEDTARLLEYESGGIL+AI++VPKGF+LI+YRGK
Sbjct: 552 VIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIDKVPKGFSLIYYRGK 611
Query: 720 NYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGN 779
NYRRP++LRPRNLLTKAKAL+RSV MQRHEALSQH+++L IE+MKK++G+S+D +
Sbjct: 612 NYRRPMTLRPRNLLTKAKALQRSVVMQRHEALSQHVTELGEKIEEMKKKLGLSQDLGTKD 671
Query: 780 IRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESDDND 828
D Q DH+S Q+E ++Y +D D ++D E S E +DND
Sbjct: 672 RWNVEDHNQIDHISEFTQSE-EEYSDGDDTDGNFNDD-EYS--ECNDND 716
>gi|357128578|ref|XP_003565949.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/714 (60%), Positives = 546/714 (76%), Gaps = 33/714 (4%)
Query: 126 IERIVLRLRNLGLGSDDEEEGEEEEDDINGAAT---GEERLEDLLRREWVRPNTVLREVE 182
I+RIV RLRNLGLG+DD+E + AAT G+ERL DLL R W RP+
Sbjct: 89 IDRIVHRLRNLGLGTDDDEP--------SAAATPLNGKERLGDLLDRSWARPDRHF--AA 138
Query: 183 GEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLR 242
D ++LPWER+++ + G ++ G +R+R+KAP+LAELT++D ELRRLR GM LR
Sbjct: 139 SSFDQAVLPWERDQDTD--GGMDEEEGGAKRKRVKAPSLAELTMDDAELRRLRGMGMTLR 196
Query: 243 ERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAG 302
+RI VPKAG+TQ V KIHD WRK ELVRLKFHE LA DMKTAHE+VERRTGGL+IWRAG
Sbjct: 197 DRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLANDMKTAHELVERRTGGLIIWRAG 256
Query: 303 SVMVVYRGNNYAGPSSKPQPLDG-------DGDTLFVPHVSS--TDGSTARSVDEKSEVP 353
SVMVVYRGNNY P+ K Q LDG + +TLF+P SS + + + + + +
Sbjct: 257 SVMVVYRGNNYTRPT-KSQTLDGTSSTRKGEDNTLFIPDASSPAENDNQGKDLTAQHDNL 315
Query: 354 VRILDH-SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLP 412
R+ H + MTEEE E N +LD LGPRF +WWGTGILPVDADLLP + GYK PFRLLP
Sbjct: 316 SRLNIHNTDDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPFRLLP 375
Query: 413 TGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQ 472
TGMR+ LTNAE+T+LR+LARSLPCHFALGRNRNHQGLA AI+KLWEKSLV KIAVKRGIQ
Sbjct: 376 TGMRTSLTNAELTNLRKLARSLPCHFALGRNRNHQGLASAIIKLWEKSLVVKIAVKRGIQ 435
Query: 473 NTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEK 532
NTNN+LM++E+K LTGGTLL RNK++IV+YRGKDFLP +VA ALAERE+ K IQ+VEE+
Sbjct: 436 NTNNELMSDEIKKLTGGTLLLRNKYFIVIYRGKDFLPQSVAVALAEREELTKDIQNVEEQ 495
Query: 533 VRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKR 592
R + +P +G A GTLAEF EAQ RWGR+V+++E+E+M E +S+ + ++ +R
Sbjct: 496 RRCTPIAHSPEDGFDGHALVGTLAEFQEAQARWGRDVTSKEQEEMKEASSRLEKEKIFRR 555
Query: 593 IEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLG 652
+EHKL+++QAK RA +LL+KIEASM+ + P D+E ITDEER++FRR+GL+MKA+LP+G
Sbjct: 556 LEHKLSIAQAKIHRAGKLLSKIEASMILANPSDDREMITDEERSVFRRIGLKMKAYLPVG 615
Query: 653 IRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFA 712
IRGVFDGV+ENMHLHWK+RE+VKLITKQKTLA+V +TARLLEYESGGIL+A+ERVPKG+A
Sbjct: 616 IRGVFDGVIENMHLHWKHREVVKLITKQKTLAFVNETARLLEYESGGILVAVERVPKGYA 675
Query: 713 LIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVS 772
LIFYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHEALSQHI+ LE+ ++QMK ++G+
Sbjct: 676 LIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAQLESNMKQMKFDLGME 735
Query: 773 KDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESDD 826
+E+ + S + D+D EDFD +DED E +++ D
Sbjct: 736 DYDEEDEDSSDSESDDNTAASA---SYDED---QEDFDESSDED-EYREYDNKD 782
>gi|326507446|dbj|BAK03116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 775
Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/664 (63%), Positives = 524/664 (78%), Gaps = 21/664 (3%)
Query: 125 AIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGE 184
+I+RIV RLRNLGLG+DD+E ++ G ERL DLL R W RP+
Sbjct: 86 SIDRIVHRLRNLGLGTDDDEPSSAA---VSAPLDGRERLGDLLDRSWARPDRQF--AASG 140
Query: 185 EDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
D+++LPWER+ E + GE+ G +R+R++AP+LAELT++D ELRRLR GM L++R
Sbjct: 141 LDEAVLPWERDRESD----GEEVDG-VKRKRVRAPSLAELTMDDVELRRLRGMGMTLKDR 195
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
I VPKAG+TQ + KIHD WRK ELVRLKFHE A DMKTAHE+VERRTGGL+IWRAGSV
Sbjct: 196 ITVPKAGVTQAITEKIHDAWRKSELVRLKFHEDHANDMKTAHELVERRTGGLIIWRAGSV 255
Query: 305 MVVYRGNNYAGPSSKPQPLDG-------DGDTLFVPHVSST---DGSTARSVDEKSEVPV 354
MVVYRG+NY P K Q LDG + LF+P+ SST D + P+
Sbjct: 256 MVVYRGSNYTRPL-KSQTLDGTSSPRKQEDSALFIPNGSSTVENDNQGKDLAAQHDNAPI 314
Query: 355 RILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414
L +++ MTEEE E N +LD LGPRF +WWGTGILPVDADLLP + GYK PFR+LPTG
Sbjct: 315 LDLHNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKAPFRVLPTG 374
Query: 415 MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474
MR+ LTN+E+T+LR+LAR+LPCHFALGRNRNHQGLA AI+KLWEKSLV KIAVKRGIQNT
Sbjct: 375 MRTSLTNSELTNLRKLARNLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNT 434
Query: 475 NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534
NNKLM++E+K+LTGGTLL RNK+YIV+YRGKDFLP +VA+ALAERE+ K IQ++EE+ R
Sbjct: 435 NNKLMSDEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQNLEEQRR 494
Query: 535 SKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIE 594
S ++E +P EG A GTLAEF EAQ RWGR V+++E+++M E + +++ +L +R+E
Sbjct: 495 SISIEHSPEDGFEGHALVGTLAEFQEAQARWGRNVTSKEQQEMKEASFRSEKEKLFRRLE 554
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
HKL+++QAK RA +LL+KIEASMV + P D+E IT EER++FRR+GL+MKA+LP+GIR
Sbjct: 555 HKLSIAQAKIHRAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLPVGIR 614
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
GVFDGV+ENMHLHWK+RE+VKLITKQKTLA+VE+TARLLEYESGGIL+AIERVPKG ALI
Sbjct: 615 GVFDGVIENMHLHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKGHALI 674
Query: 715 FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
FYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHEALSQHI LE ++QMK+++G+
Sbjct: 675 FYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDLGMEDY 734
Query: 775 EEDG 778
+E+G
Sbjct: 735 DEEG 738
>gi|449440945|ref|XP_004138244.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449477054|ref|XP_004154915.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 560
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/508 (77%), Positives = 447/508 (87%), Gaps = 6/508 (1%)
Query: 282 MKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGS 341
MKTAHEIVERRTGGLV+WR+GSVMVVYRG+NY GPS K +PL DGD +F+P VSS S
Sbjct: 1 MKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYEGPS-KIKPLTRDGDGVFIPDVSSATTS 59
Query: 342 T----ARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLL 397
T A SV EK+ +P+ ++ ++EEEAE N LLD LGPRF EWWGTG+LPVDAD L
Sbjct: 60 TSDNVAASVPEKTMMPIGPPMSNEGLSEEEAEYNQLLDGLGPRFVEWWGTGVLPVDADQL 119
Query: 398 PPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLW 457
PP + GYKTPFRLLPTGMRSRLTNAEMT +R+LA+SLPCHFALGRNRNHQGLAVAILKLW
Sbjct: 120 PPSIPGYKTPFRLLPTGMRSRLTNAEMTQMRKLAKSLPCHFALGRNRNHQGLAVAILKLW 179
Query: 458 EKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALA 517
EKSLV KIAVKRGIQNTNNKLMAEE+ +LTGG LL RNK++IV+YRGKDFLPP+VA AL
Sbjct: 180 EKSLVVKIAVKRGIQNTNNKLMAEEIGNLTGGVLLLRNKYFIVIYRGKDFLPPSVAVALT 239
Query: 518 EREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKM 577
ER++ KQIQDVEEKVR+K +EAT S GQAPAGTLAEFYEAQ RWGRE++AEEREKM
Sbjct: 240 ERQELTKQIQDVEEKVRNKVVEAT-SLSINGQAPAGTLAEFYEAQSRWGREITAEEREKM 298
Query: 578 VEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 637
VEE+S+AK ARLV+RIEHKL V+QAKKLRAE+LL+KIEASM+ S PD DQETITDEER M
Sbjct: 299 VEESSRAKTARLVRRIEHKLGVAQAKKLRAEKLLSKIEASMILSSPDDDQETITDEERVM 358
Query: 638 FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYES 697
FRRVGLRM A+LP+GIRGVFDGVVENMHLHWK+RELVKLI+KQKTLA+VE+TARLLEYES
Sbjct: 359 FRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEETARLLEYES 418
Query: 698 GGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISD 757
GGIL++I+RVPKG+AL++YRGKNYRRPI+LRPRNLLTKAKALKRSVAMQRHEALSQHIS+
Sbjct: 419 GGILVSIDRVPKGYALVYYRGKNYRRPIALRPRNLLTKAKALKRSVAMQRHEALSQHISE 478
Query: 758 LENTIEQMKKEIGVSKDEEDGNIRCSGD 785
LE IEQMKKEIGV++D +D N S D
Sbjct: 479 LEQNIEQMKKEIGVTEDSDDENKLSSQD 506
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
TI DEE RR G+ + + + G+ V+ +H W+ ELV+L + ++
Sbjct: 350 TITDEERVMFRRVGLRMTAYLPMGIRGVFDGVVENMHLHWKHRELVKLISKQKTLAFVEE 409
Query: 285 AHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGP 316
++E +GG+++ G +V YRG NY P
Sbjct: 410 TARLLEYESGGILVSIDRVPKGYALVYYRGKNYRRP 445
>gi|222632479|gb|EEE64611.1| hypothetical protein OsJ_19463 [Oryza sativa Japonica Group]
Length = 601
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/548 (69%), Positives = 454/548 (82%), Gaps = 11/548 (2%)
Query: 239 MYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVI 298
M LR+RI VPKAG+TQ V KIHD WRK ELVRLKFHE LA DMKTAHE+VERRTGGL+I
Sbjct: 1 MTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHDMKTAHELVERRTGGLII 60
Query: 299 WRAGSVMVVYRGNNYAGPSSKPQPLDGDGD-------TLFVPHVSS--TDGSTARSVDEK 349
WR+GSVMVVYRG+NY P K + LDG+ TLF+P SS S + V+ +
Sbjct: 61 WRSGSVMVVYRGSNYKRPL-KSETLDGNSSAVKGADGTLFIPDASSPTEHDSQGKDVNTQ 119
Query: 350 SEVPVRI-LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPF 408
E+ R+ + +++ MTEEE E N +LD LGPRF +WWGTGILPVDADLLP + GYKTPF
Sbjct: 120 REIAARLNMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPVDADLLPQTIPGYKTPF 179
Query: 409 RLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVK 468
RLLPTGMR LTNAE+T+LR+LAR LPCHFALGRNRNHQGLA AI+KLWEKSLV KIAVK
Sbjct: 180 RLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVK 239
Query: 469 RGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQD 528
RGIQNTNNKLM+EE+K+LTGGTLL RNK+YIV+YRGKDFLP +VA+ALAERE+ K IQ+
Sbjct: 240 RGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSVAAALAEREELTKDIQN 299
Query: 529 VEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHAR 588
VEE+ R + + +G A AGTLAEF EAQ RWGREV+A+E+E+M E +S++ +
Sbjct: 300 VEEQKRCIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSVKEK 359
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
L KR+EHKL+++QAK RAERLL+KIEASMV + P D+E ITDEER++FRR+GLR+KA+
Sbjct: 360 LFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITDEERSVFRRIGLRLKAY 419
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
LP+GIRGVFDGV+ENMHLHWK+RE+VKLITKQKTL +VE+TARLLEYESGGIL+AIERV
Sbjct: 420 LPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARLLEYESGGILVAIERVT 479
Query: 709 KGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKE 768
KG+ALIFYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHEALSQHI++LEN I QMK +
Sbjct: 480 KGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALSQHIAELENNIRQMKLD 539
Query: 769 IGVSKDEE 776
+G+ DEE
Sbjct: 540 LGIEVDEE 547
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
I DEE RR G+ L+ + V G+ V+ +H W+ E+V+L + ++
Sbjct: 401 ITDEERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEET 460
Query: 286 HEIVERRTGGLVI----WRAGSVMVVYRGNNYAGP 316
++E +GG+++ G ++ YRG NY P
Sbjct: 461 ARLLEYESGGILVAIERVTKGYALIFYRGKNYRRP 495
>gi|357521157|ref|XP_003630867.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355524889|gb|AET05343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 676
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 344/675 (50%), Positives = 439/675 (65%), Gaps = 118/675 (17%)
Query: 124 NAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEG 183
NAI+RIVL+ RNL +DDE I L R+W+R
Sbjct: 41 NAIDRIVLQFRNLSDQNDDE--------PIRTLLPNY-----FLHRQWIR---------- 77
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
D+S++P E E + + ++ + P L E EEL RLR G++L++
Sbjct: 78 -SDESVIPSEEVEHKL--------LKKKKKNEVTVPCL-----EKEELSRLRTMGIHLKQ 123
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE------------- 290
+I++PK+GLT+ V+++IH +W +ELV+LKFH+ L +M AH IV+
Sbjct: 124 KISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLAHNIVQVSIPSSRIIPYRM 183
Query: 291 -----------------------------RRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
RRTGGLVIWR+GSVM VYRG +Y GP++ Q
Sbjct: 184 VIVLQLVILCFFFHHRITNLVPSGLYLLVRRTGGLVIWRSGSVMWVYRGKSYQGPTNGNQ 243
Query: 322 PLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKP--MTEEEAECNSLLDSLGP 379
GD EKSE V L+ +P MT EEAE N +LD GP
Sbjct: 244 HESKGGD-------------------EKSESVV--LNQQQPENMTPEEAEFNRMLDDFGP 282
Query: 380 RFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFA 439
RF +WWGTGILPVDADLLPP + GY+TP R+LP M RLTN E T + +LA++LPCHFA
Sbjct: 283 RFVDWWGTGILPVDADLLPPTIPGYRTPLRILPARMHPRLTNDEHTKMLKLAKALPCHFA 342
Query: 440 LGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYI 499
LGRNRN QGLA AILKLWEKSLVAKIAVK G+QNTNN+LMA ELK LTGGTLL RNK+YI
Sbjct: 343 LGRNRNLQGLACAILKLWEKSLVAKIAVKLGVQNTNNELMALELKKLTGGTLLLRNKYYI 402
Query: 500 VLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFY 559
++YRGKDF+P +VA+ L+ER +E V+ + ++ SGE E A AG++AEF
Sbjct: 403 LIYRGKDFIPTSVAAILSER----------QENVQCRAVDV--SGEDETSAQAGSMAEFN 450
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAV----SQAKKLRAERLLAKIE 615
EAQ GRE+S EE EKM++EA++A + RL+K+IE K AV + KK RAE+LLAKI+
Sbjct: 451 EAQALCGREISTEECEKMMKEAAEATNVRLMKKIERKPAVIHEHTDTKKSRAEKLLAKID 510
Query: 616 ASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVK 675
+SMVP GPD +ETITDEER MFR VGLR+K +L L GVFD V+ENMHLHW+ RELVK
Sbjct: 511 SSMVPVGPDNRRETITDEERVMFRVVGLRLKVYLQLDTLGVFDSVIENMHLHWRQRELVK 570
Query: 676 LITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTK 735
LITKQK+LA+VE+TA LLEY+SGGIL+AI+R+PKGF+LI+YRGK+Y+RPI+LR RNLLTK
Sbjct: 571 LITKQKSLAFVEETASLLEYKSGGILVAIDRLPKGFSLIYYRGKDYKRPITLRHRNLLTK 630
Query: 736 AKALKRSVAMQRHEA 750
KAL+ S++MQRHE+
Sbjct: 631 TKALQHSISMQRHES 645
>gi|449432614|ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 338/801 (42%), Positives = 482/801 (60%), Gaps = 67/801 (8%)
Query: 78 WLNNWS------RPKPPSTENANKLGGRNQIDEKQTSPDSYPRYS---DSDNKGRNAIER 128
W++ W+ RPKPP N++ T R S D D +G + +E+
Sbjct: 83 WIDRWNETAKRNRPKPPRAVLDYPSSDENEVSISSTGFSKSYRASSRIDDDGRGGSTMEK 142
Query: 129 IVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRPNT---VLRE---- 180
IV +L+ G D+ +E EE G+ +ED+L E + PNT +E
Sbjct: 143 IVRKLKKFGYIDDENKEKGEERAIEKGS------VEDILYIEEGMLPNTRGGFSKESPMG 196
Query: 181 ---VEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRN 237
+ G + + PWE+ +E+ E G++ RR + +LA+LT+ + ELRRLR
Sbjct: 197 DENMFGSDGEVRFPWEKPKEK------EDTHGDSTRR--GSASLAQLTLPEPELRRLRNL 248
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
R ++ + G+TQ V+ IH+KW+ E+VRLK A +MK HEI+ER+TGGLV
Sbjct: 249 TFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGLV 308
Query: 298 IWRAGSVMVVYRGNNYAGPSSKPQ------------PLDGDGDTLFVPHVSSTDGSTARS 345
IWR+G+ + +YRG +Y P + PQ L G + P SS+ +
Sbjct: 309 IWRSGTSLSLYRGVSYELPEA-PQFNKRIYKRNEITALPKTGASTIAPSESSSHRNVYAL 367
Query: 346 VDEKSEVPVRILDHSKPMTE----EEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
+++E + S+ +T+ E E N LLD LGPR+ +W G LPVDAD+LP V
Sbjct: 368 QQKRAETSIEGEHCSEQLTKVQVNYEDEVNKLLDGLGPRYTDWPGLDPLPVDADMLPGVV 427
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
Y+ PFR+LP G+RS + E T L+RLAR LP HFALGRNR QGLA+A+ KLWE+SL
Sbjct: 428 PDYEPPFRILPYGVRSSIGVKEATALKRLARRLPPHFALGRNRQLQGLAIAMTKLWERSL 487
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AKIA+KRG+Q T ++ MAEE+K LTGG LL RNK ++V YRGK FL P V AL ERE+
Sbjct: 488 IAKIALKRGVQLTTSERMAEEIKKLTGGMLLSRNKDFLVFYRGKSFLSPEVTEALLERER 547
Query: 522 CAKQIQDVEEKVRSK-TLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEE 580
AK +QD EE+ R K + P +TE AG+L E +A RWG+ + + +E ++ E
Sbjct: 548 LAKSLQDKEEQARLKASAFVVPIEKTEQSGTAGSLEETLDADARWGKALDDKHKENVMRE 607
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
A + +H LV+++E KLA ++ K ++AER LAK+EA M P+ + ++IT+EER MFR+
Sbjct: 608 AEQLRHTDLVRKLERKLAFAERKLVKAERTLAKVEAFMTPAKRQAEPDSITEEERFMFRK 667
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GLRMKAFL LG R VFDG VENMHLHWKYRELVK++ K + +V++ A LE ESGG+
Sbjct: 668 LGLRMKAFLLLGRREVFDGTVENMHLHWKYRELVKIMIKANSFDHVKNIALQLEAESGGV 727
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
L++I++V KG+A+I YRGK+Y+RP LRP+NLLTK KAL RS+ +QRHEAL +HIS +++
Sbjct: 728 LVSIDKVSKGYAIIVYRGKDYKRPSLLRPKNLLTKRKALARSIELQRHEALLKHISAMQS 787
Query: 761 TIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHV-SVLPQNED------DDY-VSDEDFDSE 812
+ ++ EI E+ ++ GD ++ + S P + D D Y D+D D E
Sbjct: 788 KVGKLNSEI-----EQMEKVKDQGDEVLYNTLDSAYPTDNDSEDENSDTYEAYDQDSDVE 842
Query: 813 ADEDSELSSFESDDNDLSKNG 833
DED ++S E + D+S NG
Sbjct: 843 -DEDDIMASDEYLEGDIS-NG 861
>gi|356576487|ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 345/874 (39%), Positives = 500/874 (57%), Gaps = 91/874 (10%)
Query: 1 MALTTSKLTELPFRNSLTLTSHSTPSLNHLPFSSSSRK---TPS----FQLLKPFSSLRT 53
MAL ++ PF +S HS+P+ + L F +S + TPS F KP R
Sbjct: 1 MALVPTR----PFFDSF----HSSPNFHSLRFCNSLFRHSLTPSPNSTFLRRKPLFIFRC 52
Query: 54 NQNPRTDSQNQQFPKPRSPSTSAPWLNNW-------SRPKPPSTENANKLGGRNQIDEKQ 106
N +S ST WL W +RPKPP +D +
Sbjct: 53 NP-------------AKSFSTDKHWLKRWNDPTNNHARPKPPCA----------VLDYSE 89
Query: 107 TSPDSYPRYSDSD------NKGRNAIERIVLRLRNLGLGSDDEEEGEE--EEDDINGAAT 158
S + SD N G + ++RIV +L+ G D + E E+ +
Sbjct: 90 NGHASKSGLASSDEEGGDGNTGGSTMDRIVEKLKKFGYVEDGIQNKERVIEKGSVEDIFY 149
Query: 159 GEERLEDLLRREWVRPNTVLREVEGEEDDSL-LPWEREEEENLRAGGEKPAGETRRRRMK 217
EE + R + + + G +D + PWE+ E L E + R +
Sbjct: 150 VEEGMLPNSRGGFSSESPLGFGSFGSDDREVRFPWEKPVVEELE--------ERKSMRSR 201
Query: 218 APT-LAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
+ T LAELT+ + EL+RL + + + + ++G+TQ V+ KIH++W+ E+VRLKF
Sbjct: 202 SKTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEG 261
Query: 277 VLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP-----QPLDGDGDTLF 331
A +MK HEI+ER+TGGLVIWR+G+ + +YRG +Y PS + + + L
Sbjct: 262 EAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYEVPSVQQNKKIYRKSENSSKLLP 321
Query: 332 VPHVSSTDGSTARSVDEKSEVPVRILDHSK--------PMTEEEAECNSLLDSLGPRFQE 383
P +S + + + + P+ L+ + P E E + LLD LGPR+ +
Sbjct: 322 TPSYNSVGNPSDIASNSGTSAPLAKLESTNDEKERDYLPKVNYEHEVDKLLDGLGPRYTD 381
Query: 384 WWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRN 443
W G LPVDAD+LP V GY+ PFR+LP G+R+ L E T LRR+AR+LP HFALGRN
Sbjct: 382 WPGCDPLPVDADMLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIARTLPPHFALGRN 441
Query: 444 RNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYR 503
R QGLAVA++KLWE S +AK+A+KRG+Q T ++ MAEE+K LTGG LL RNK ++V +R
Sbjct: 442 RQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTGGILLSRNKDFLVFFR 501
Query: 504 GKDFLPPNVASALAEREQCAKQIQDVEE--KVRSKTLEATPSGETEGQAPAGTLAEFYEA 561
GK+FL +V AL ERE+ AK +QD EE ++R+ +L + +E A AGTL E +A
Sbjct: 502 GKNFLSADVTQALLERERMAKVMQDEEEQARLRASSLLIPTNNTSELSAEAGTLGETLDA 561
Query: 562 QKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPS 621
+WG+ + ++K++ E + +HA LVK++E KL+ ++ K RAE+ L K+E+ + PS
Sbjct: 562 DAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLRRAEKALMKVESFLKPS 621
Query: 622 GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQK 681
D E+ITDEER MFR++GLRMKAFL LG RGVFDG +ENMHLHWKYRELVK+I K K
Sbjct: 622 EYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKAK 681
Query: 682 TLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKR 741
T V+ A LE ESGG+L+++++V KG+++I YRGK+Y+RP +LRP+NLLTK KAL R
Sbjct: 682 TFEQVKKIALALEAESGGVLVSVDKVSKGYSVIVYRGKDYQRPSTLRPKNLLTKRKALAR 741
Query: 742 SVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHV-SVLPQNED 800
S+ +QRHEAL HIS L++ + +++ EI E+ ++ GD +D + S P +++
Sbjct: 742 SIELQRHEALMNHISTLQSKVGRIRSEI-----EQMEKVKDKGDEALYDKLDSAYPSDDE 796
Query: 801 DDYVSDEDFDSEA-------DEDSELSSFESDDN 827
+ V D + EA + DSE+ S DN
Sbjct: 797 NSEVEDGEQGDEAYLKTYNSENDSEIESEVESDN 830
>gi|357441009|ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355479830|gb|AES61033.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 325/793 (40%), Positives = 462/793 (58%), Gaps = 60/793 (7%)
Query: 22 HSTPSLNH----LPFSSSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPSTSAP 77
H++P+ +H SSS SF P T S+N F +S T
Sbjct: 13 HTSPNFHHSIRFFTTISSSSIQKSFIFKTP-----TKNFTYLSSKNPIF-HLKSFCTDT- 65
Query: 78 WLNNWS---RPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLR 134
WL W+ RPKPP + G + + G + ++RIV +L+
Sbjct: 66 WLKRWNEQNRPKPPRGVLNYQGSGNGHSSKSDFDSSDDEDF------GGSRMDRIVEKLK 119
Query: 135 NLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRPNT-----------VLREVE 182
G SD+ E +EE G+ +ED+ E + PNT +
Sbjct: 120 KFGYESDENENIKEEGVIEKGS------MEDIFYVEEGMLPNTRGGFSPESPFGIGSYGS 173
Query: 183 GEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLR 242
G+ + PWE+ E+ T R+ ++AELT+ + ELRRL + +
Sbjct: 174 GDGGEVRFPWEKP------VVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKK 227
Query: 243 ERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAG 302
+ + G+TQ + KIH++W+ E+VRLKF A +MK HEI+E++TGGLVIWR+G
Sbjct: 228 HKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSG 287
Query: 303 SVMVVYRGNNYAGPSSKPQP------------LDGDGDTLFV-PHVSSTDGSTARSVDEK 349
+ + +YRG +Y PS + L D V P +TD T S+++
Sbjct: 288 NSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFLSAPSDDFEVEPSEFTTDSETKTSLEKL 347
Query: 350 SEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFR 409
+ + P E E + LLD LGPR+ +W G LPVDAD+LPP V GY+ PFR
Sbjct: 348 ESTNDQKEKVNLPKISYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPPFR 407
Query: 410 LLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKR 469
+LP G+R L E T LRR+AR LP HFALGRNR QGLA A++KLWEKS +AK+A+KR
Sbjct: 408 VLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKR 467
Query: 470 GIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDV 529
G+Q T ++ MAEE+K LTGG +L RNK ++V YRGK+FL P+V AL ERE+ AK +QD
Sbjct: 468 GVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALLEREKMAKSMQDE 527
Query: 530 EE--KVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHA 587
EE ++R+ +L +E A AGTL E +A +WG+ + +K++ E + +HA
Sbjct: 528 EEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDECHEQKVMREVEQLRHA 587
Query: 588 RLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKA 647
+V+++E KL++++ K RAER L K+E S+ PS D E+ITDEER MFR++GLRMKA
Sbjct: 588 NIVRKLEEKLSLAERKIRRAERALMKVEVSLKPSETRADPESITDEERFMFRKLGLRMKA 647
Query: 648 FLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERV 707
FL LG RGVFDG +ENMHLHWKYRELVK+I K +V+ A LE ESGG+L+++++V
Sbjct: 648 FLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKV 707
Query: 708 PKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKK 767
KG++++ YRGK+Y+RP LRP+NLLTK KAL RS+ +QRHEALS HIS L++ +E+++
Sbjct: 708 SKGYSILVYRGKDYQRPSMLRPKNLLTKRKALARSIELQRHEALSSHISTLQSKVEKLRS 767
Query: 768 EI-GVSKDEEDGN 779
EI + K +E+G+
Sbjct: 768 EIEQIEKVKEEGD 780
>gi|225432918|ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product [Vitis vinifera]
Length = 902
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/728 (43%), Positives = 454/728 (62%), Gaps = 46/728 (6%)
Query: 126 IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRPNTVLREVEGE 184
+E+IV +L+ G D +E E ++ I + +ED+ E + PN G
Sbjct: 124 MEKIVEKLKKFGYMDDVKETKENVQERIIEKGS----IEDIFYIEEGILPNPQ----GGF 175
Query: 185 EDDSLLPWEREEEEN--LRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRRLRRNGMYL 241
DS L E + + N +R E+P E R+K+ T LAELT+ + ELRRLR M
Sbjct: 176 SLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRT 235
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+ + + G+TQ V+ I +KW+ E+V+LK A +M+ HEI+ER+TGGLVIWR+
Sbjct: 236 KNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWRS 295
Query: 302 GSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKS----------- 350
G+ + +YRG +Y P + + +T S T S A S ++ S
Sbjct: 296 GTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQN 355
Query: 351 ----EVPVRILDHSKPMTEEEA----ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVD 402
+ + I D TE E E + LLD LGPR+ +W G LP+DADLLP K+
Sbjct: 356 VHASQATLNITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPGCDPLPIDADLLPGKIH 415
Query: 403 GYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLV 462
GY+ PFR+LP G+RS L E T LRRLAR LP HFALGR+R +GLA+A++KLWE+S +
Sbjct: 416 GYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSSI 475
Query: 463 AKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC 522
AK+A+KRG+Q T ++ MAE++K LTGG LL RNK ++V YRGK+FL +V AL ERE+
Sbjct: 476 AKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERERL 535
Query: 523 AKQIQDVEE--KVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEE 580
AK +QD EE ++R+ TL G TE AGTL E EA RWG+ + +++KM+++
Sbjct: 536 AKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLKK 595
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
A A+HA LV+++E +LA+++ K ++AE L+K+E + P+ D E+ITDEER MFR+
Sbjct: 596 AEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFRK 655
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GLRMKAFL LG RGVF G VENMHLHWKYRELVK+I K KT V+ TA LE ESGG+
Sbjct: 656 LGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGGV 715
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
L+++++V KGFA++ +RGK+Y+RP +LRP+NLLTK KAL RS+ +QR EAL HIS L+
Sbjct: 716 LVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQR 775
Query: 761 TIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELS 820
+E+++ EI E+ ++ GD + +D + D Y ++++ E +++ L
Sbjct: 776 NVEKLRSEI-----EQMDIVKDHGDEELYDKL-------DSAYATEDEHTEEEGDEAYLE 823
Query: 821 SFESDDND 828
++ +D+ND
Sbjct: 824 TY-ADEND 830
>gi|359484307|ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 884
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 303/598 (50%), Positives = 387/598 (64%), Gaps = 38/598 (6%)
Query: 190 LPWEREEEENLRAGGEKPA---GETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERIN 246
LPW+R E G +P G RR +AE + + ELRRL+ + + ERI
Sbjct: 239 LPWKRRE-------GLQPVERDGWGRRN----TRMAERMVPEHELRRLKNIALRMLERIK 287
Query: 247 VPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMV 306
V AG+TQ ++ IH+KWRKDE+V+LKF + +MK HEI+E RTGGLVIWR GS +V
Sbjct: 288 VGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVV 347
Query: 307 VYRGNNY---AGPSSKPQPLDG--------DGDTLFVPHVSSTD-GSTARSVDEKSEVPV 354
+YRG Y S Q D D + + + D T SV S
Sbjct: 348 LYRGMAYKLHCVQSYIKQERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDS---A 404
Query: 355 RILDHSKPMTEEE----AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRL 410
R L K ++EEE +E N LLD LGPRF++W G LPVDADLLP V YK PFRL
Sbjct: 405 RYL---KDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRL 461
Query: 411 LPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRG 470
LP GMR L N EMT +RRLAR++P HFALGR+R QGLA+A++KLWE+S +AKIA+KRG
Sbjct: 462 LPYGMRHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRG 521
Query: 471 IQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVE 530
+QNT N MAEELK+LTGGTL+ RNK YIV YRG DFLPP+V AL ER + QD E
Sbjct: 522 VQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEE 581
Query: 531 EKVRSKTLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHAR 588
E+ R + S + P AGTLAE A RWG E S E+ KM+ +++ A+HA
Sbjct: 582 EQARHRASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHAS 641
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
LV+ + KLA ++AK + E+ L K++ + P+ D ET++DEER +FR++GL MK F
Sbjct: 642 LVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPF 701
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
L LG RG+FDG VENMHLHWKYRELVK+I K K A V+ A LE ESGG+L++++R P
Sbjct: 702 LLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTP 761
Query: 709 KGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
KG+A+I YRGKNY+RP +LRP+NLLTK +AL RS+ +QRHEAL HISDLE I+ +K
Sbjct: 762 KGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLK 819
>gi|297738658|emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 303/598 (50%), Positives = 387/598 (64%), Gaps = 38/598 (6%)
Query: 190 LPWEREEEENLRAGGEKPA---GETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERIN 246
LPW+R E G +P G RR +AE + + ELRRL+ + + ERI
Sbjct: 236 LPWKRRE-------GLQPVERDGWGRRN----TRMAERMVPEHELRRLKNIALRMLERIK 284
Query: 247 VPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMV 306
V AG+TQ ++ IH+KWRKDE+V+LKF + +MK HEI+E RTGGLVIWR GS +V
Sbjct: 285 VGAAGVTQSLVDAIHEKWRKDEVVKLKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVV 344
Query: 307 VYRGNNY---AGPSSKPQPLDG--------DGDTLFVPHVSSTD-GSTARSVDEKSEVPV 354
+YRG Y S Q D D + + + D T SV S
Sbjct: 345 LYRGMAYKLHCVQSYIKQERDNVNISEYSQDAANVIIQDIGVKDIVKTTESVISDS---A 401
Query: 355 RILDHSKPMTEEE----AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRL 410
R L K ++EEE +E N LLD LGPRF++W G LPVDADLLP V YK PFRL
Sbjct: 402 RYL---KDLSEEELMDLSELNHLLDELGPRFKDWSGREPLPVDADLLPSVVHEYKPPFRL 458
Query: 411 LPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRG 470
LP GMR L N EMT +RRLAR++P HFALGR+R QGLA+A++KLWE+S +AKIA+KRG
Sbjct: 459 LPYGMRHCLRNREMTFIRRLARTMPPHFALGRSRELQGLAMAMVKLWERSAIAKIAIKRG 518
Query: 471 IQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVE 530
+QNT N MAEELK+LTGGTL+ RNK YIV YRG DFLPP+V AL ER + QD E
Sbjct: 519 VQNTCNDRMAEELKNLTGGTLVSRNKDYIVFYRGNDFLPPHVMEALKERRKLRDLQQDEE 578
Query: 531 EKVRSKTLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHAR 588
E+ R + S + P AGTLAE A RWG E S E+ KM+ +++ A+HA
Sbjct: 579 EQARHRASALIDSKARSAKGPLVAGTLAETLAATSRWGSEPSEEDVGKMIRDSALARHAS 638
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
LV+ + KLA ++AK + E+ L K++ + P+ D ET++DEER +FR++GL MK F
Sbjct: 639 LVRYVGKKLAHAKAKLKKTEKALRKVQEDLEPAELPMDLETLSDEERFLFRKIGLSMKPF 698
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
L LG RG+FDG VENMHLHWKYRELVK+I K K A V+ A LE ESGG+L++++R P
Sbjct: 699 LLLGTRGIFDGTVENMHLHWKYRELVKIIVKGKNFAQVKHIAISLEAESGGVLVSVDRTP 758
Query: 709 KGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
KG+A+I YRGKNY+RP +LRP+NLLTK +AL RS+ +QRHEAL HISDLE I+ +K
Sbjct: 759 KGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDLEERIKLLK 816
>gi|224091282|ref|XP_002309217.1| predicted protein [Populus trichocarpa]
gi|222855193|gb|EEE92740.1| predicted protein [Populus trichocarpa]
Length = 977
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 287/599 (47%), Positives = 393/599 (65%), Gaps = 19/599 (3%)
Query: 183 GEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLR 242
G + + LPW+R G GE + R+ LAE + + EL+RLR + +
Sbjct: 328 GVSNSNELPWKR-------TSGLDSLGEDKSRKKSNTDLAERMLPEHELKRLRNVALRML 380
Query: 243 ERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAG 302
ERI V G+TQD++ IH+KW+ DE+V+LKF L+ +MK HEI+E RTGGL+IWR+G
Sbjct: 381 ERIKVGATGITQDLVDAIHEKWKLDEVVKLKFEWPLSCNMKRTHEILESRTGGLIIWRSG 440
Query: 303 SVMVVYRGNNY---AGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILD- 358
S +V+YRG Y S Q G + +++ S+A D + I D
Sbjct: 441 SSVVMYRGTTYKFQCVQSYTKQNEAGMDVLQYAEEATNSATSSAGMKDLARTMESIIPDA 500
Query: 359 --HSKPMTEEE----AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLP 412
+ K +++EE +E N LLD LGPR+++W G LPVDADLLP V GYK+P RLLP
Sbjct: 501 AKYLKDLSQEELMDFSELNHLLDELGPRYKDWCGREPLPVDADLLPAVVPGYKSPLRLLP 560
Query: 413 TGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQ 472
G++ L+N T+ RRLAR+ P HF LGRNR QGLA A++KLWE+S +AKIA+KRG+Q
Sbjct: 561 YGVKPCLSNKNTTNFRRLARTTPPHFVLGRNRELQGLANAMVKLWERSAIAKIAIKRGVQ 620
Query: 473 NTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEK 532
T N++MAEELK LTGGTLL RNK YIV YRG DFLPP + L ER + A QD E++
Sbjct: 621 YTRNEIMAEELKRLTGGTLLSRNKEYIVFYRGNDFLPPVINETLKERRKLAFLYQDEEDQ 680
Query: 533 VRSKTLEATPSG--ETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLV 590
R T S T+G AGTL E A RWG + S+E+ E+M+ +++ A+HA LV
Sbjct: 681 ARQMTSAFIGSSVKTTKGPLVAGTLVETVAAISRWGNQPSSEDVEEMIRDSALARHASLV 740
Query: 591 KRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLP 650
K +E+KLA ++ K ++E+ LAK++ ++ P+ D ETI+DEER +FR++GL MK +L
Sbjct: 741 KHLENKLAQAKGKLKKSEKDLAKVQENLEPTELPTDLETISDEERFLFRKIGLSMKPYLF 800
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG RGVFDG +ENMHLHWKYRELVK+I ++K +A V+ A LE ESGG+L++++R KG
Sbjct: 801 LGRRGVFDGTIENMHLHWKYRELVKIIVERKGIAQVKHIAISLEAESGGVLVSVDRTTKG 860
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+A+I YRGKNY RP ++RP NLLT+ +AL RSV +QR+EAL HI+DL+ IE + E+
Sbjct: 861 YAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQRYEALKHHITDLQERIELVTSEL 919
>gi|147852748|emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 314/729 (43%), Positives = 453/729 (62%), Gaps = 46/729 (6%)
Query: 125 AIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRPNTVLREVEG 183
+E+IV +L+ G D +E E ++ I + +ED+ E + PN G
Sbjct: 123 TMEKIVEKLKKFGYMDDVKETKENVQERIIEKGS----IEDIFYIEEGILPNPQ----GG 174
Query: 184 EEDDSLLPWEREEEEN--LRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRRLRRNGMY 240
DS L E + + N +R E+P E R+K+ T LAELT+ + ELRRLR M
Sbjct: 175 FSLDSPLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMR 234
Query: 241 LRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWR 300
+ + + G+TQ V+ I +KW+ E+V+LK A +M+ HEI+ER+TGGLVIWR
Sbjct: 235 TKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGLVIWR 294
Query: 301 AGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKS---------- 350
+G+ + +YRG +Y P + + +T S T S A S ++ S
Sbjct: 295 SGTSVSLYRGVSYEVPVQLNKRVYKKNETSHSSFSSITPNSFAISSNKTSGNAPAVGSNQ 354
Query: 351 -----EVPVRILDHSKPMTEEEA----ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
+ + I D TE E E + LLD LGPR+ +W LP+DADLLP K+
Sbjct: 355 NVHASQATLXITDGENKDTESEVKYEDEIDKLLDGLGPRYTDWPXCDPLPIDADLLPGKI 414
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
GY+ PFR+LP G+RS L E T LRRLAR LP HFALGR+R +GLA+A++KLWE+S
Sbjct: 415 HGYQPPFRILPYGVRSSLGLKEATALRRLARVLPPHFALGRSRQLEGLAMAMIKLWERSS 474
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AK+A+KRG+Q T ++ MAE++K LTGG LL RNK ++V YRGK+FL +V AL ERE+
Sbjct: 475 IAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSSDVTEALLERER 534
Query: 522 CAKQIQDVEE--KVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE 579
AK +QD EE ++R+ TL G TE AGTL E EA RWG+ + +++KM++
Sbjct: 535 LAKALQDEEEQARLRASTLITPTVGITEQVGSAGTLGETLEADARWGKRLDDHDKQKMLK 594
Query: 580 EASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFR 639
+A A+HA LV+++E +LA+++ K ++AE L+K+E + P+ D E+ITDEER MFR
Sbjct: 595 KAEVARHANLVRKLERRLALAERKLMKAENALSKVEEFLKPANRPADPESITDEERFMFR 654
Query: 640 RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGG 699
++GLRMKAFL LG RGVF G VENMHLHWKYRELVK+I K KT V+ TA LE ESGG
Sbjct: 655 KLGLRMKAFLLLGRRGVFSGTVENMHLHWKYRELVKIIVKAKTFDQVKKTALALESESGG 714
Query: 700 ILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLE 759
+L+++++V KGFA++ +RGK+Y+RP +LRP+NLLTK KAL RS+ +QR EAL HIS L+
Sbjct: 715 VLVSVDKVSKGFAIVVFRGKDYQRPSTLRPKNLLTKRKALARSIELQRREALYNHISALQ 774
Query: 760 NTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSEL 819
+E+++ EI E+ ++ GD + +D + D Y ++++ E +++ L
Sbjct: 775 RNVEKLRSEI-----EQMDIVKDHGDEELYDKL-------DSAYATEDEHTEEEGDEAYL 822
Query: 820 SSFESDDND 828
++ +D+ND
Sbjct: 823 ETY-ADEND 830
>gi|414591664|tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/796 (41%), Positives = 456/796 (57%), Gaps = 85/796 (10%)
Query: 73 STSAP--WLNNWSRPK-------PPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGR 123
STSAP WL +WS P+ PP+ + + + + + + S + GR
Sbjct: 705 STSAPHPWLYSWSHPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGA------SRSSGR 758
Query: 124 NAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEG 183
+ + I+ RLR G +D +ED+ R + + VL G
Sbjct: 759 STMSLILSRLRRAGYSGEDPRAAAPPHPPRGS-------VEDVFRAD----DGVLPNARG 807
Query: 184 EED---------DSLLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRR 233
D D+ PWER P E R ++PT +AELT+ ELRR
Sbjct: 808 GFDADDEERALGDARFPWERP----------MPPPEAAPRSARSPTWMAELTLPAAELRR 857
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
LR + ++ R V AG+T++++ KI +KW+ +E+VR+K A +M+ HEI+ER+T
Sbjct: 858 LRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKT 917
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPSSKPQ------------PLDGDGDTLFVPHVSSTDGS 341
GGLVIWR+G+ + +YRG +Y P + P+ G + +P + +
Sbjct: 918 GGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLP-TETANSV 976
Query: 342 TARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
+V S L P + E E + LLD LGPR+ +W G+ LPVDADLLP +
Sbjct: 977 RDSNVALVSNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANM 1036
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
GYK PFR+LP G+R L+ + T+LRRLAR LP HFALGR+R QGLA A++KLWEKS
Sbjct: 1037 PGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSS 1096
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AKIA+KRG+Q T ++ MAE++K LTGG +L RN +IV YRGKDFL +A L ERE+
Sbjct: 1097 IAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERER 1156
Query: 522 CAKQIQDVEEKVRSKTLEATPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREKMVEE 580
AK +QD EE+ R K S ET Q AGTL E EA ++G + +KM
Sbjct: 1157 LAKSLQD-EEEARRKAASYFSSAETYAQPTVAGTLGETLEANSKYGTKHDENHADKMART 1215
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
A+HA LV+++E KL+++Q K +AER+L K+E ++ P+ ETITDEER MFR+
Sbjct: 1216 IEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRK 1275
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GLRMKAFL LG RGVFDG +ENMHLHWKYRELVK++ K K+ A V+ A LE ESGGI
Sbjct: 1276 LGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGI 1335
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
L+++++V KG+A++ +RGKNYRRP SLRPRNLL+K KAL RS+ +QRH+ALS+H + L
Sbjct: 1336 LVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNR 1395
Query: 761 TIEQMKKEIGVSKD-EEDGN--------------------IRCSGDLKQFDHVSVLPQNE 799
+E++K E+ +D +E G+ LK+FD+ V
Sbjct: 1396 KVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDN-EVAGATA 1454
Query: 800 DDDYVSDEDFDSEADE 815
DDD +D+ S ADE
Sbjct: 1455 DDD--GSDDYTSAADE 1468
>gi|162459980|ref|NP_001106061.1| CRM family member 3 [Zea mays]
gi|156789080|gb|ABU96081.1| CRM family member 3 [Zea mays]
Length = 842
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/796 (41%), Positives = 456/796 (57%), Gaps = 85/796 (10%)
Query: 73 STSAP--WLNNWSRPK-------PPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGR 123
STSAP WL +WS P+ PP+ + + + + + + S + GR
Sbjct: 24 STSAPHPWLYSWSHPRQRGRLRAPPAALDLRPEPSPSSDSDDEDAVGA------SRSSGR 77
Query: 124 NAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEG 183
+ + I+ RLR G +D +ED+ R + + VL G
Sbjct: 78 STMSLILSRLRRAGYSGEDPRAAAPPHPPRGS-------VEDVFRAD----DGVLPNARG 126
Query: 184 EED---------DSLLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRR 233
D D+ PWER P E R ++PT +AELT+ ELRR
Sbjct: 127 GFDADDEERALGDARFPWERP----------MPPPEAAPRSARSPTWMAELTLPAAELRR 176
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
LR + ++ R V AG+T++++ KI +KW+ +E+VR+K A +M+ HEI+ER+T
Sbjct: 177 LRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERKT 236
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPSSKPQ------------PLDGDGDTLFVPHVSSTDGS 341
GGLVIWR+G+ + +YRG +Y P + P+ G + +P + +
Sbjct: 237 GGLVIWRSGTSVSLYRGVDYDEPEPTKKSKKNSQSLAMDFPIKGSSNPSLLP-TETANSV 295
Query: 342 TARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
+V S L P + E E + LLD LGPR+ +W G+ LPVDADLLP +
Sbjct: 296 RDSNVALVSNAAKEELVVQAPEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDADLLPANM 355
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
GYK PFR+LP G+R L+ + T+LRRLAR LP HFALGR+R QGLA A++KLWEKS
Sbjct: 356 PGYKPPFRVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLANAMVKLWEKSS 415
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AKIA+KRG+Q T ++ MAE++K LTGG +L RN +IV YRGKDFL +A L ERE+
Sbjct: 416 IAKIALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEVLLERER 475
Query: 522 CAKQIQDVEEKVRSKTLEATPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREKMVEE 580
AK +QD EE+ R K S ET Q AGTL E EA ++G + +KM
Sbjct: 476 LAKSLQD-EEEARRKAASYFSSAETYAQPTVAGTLGETLEANSKYGTKHDENHADKMART 534
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
A+HA LV+++E KL+++Q K +AER+L K+E ++ P+ ETITDEER MFR+
Sbjct: 535 IEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRK 594
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GLRMKAFL LG RGVFDG +ENMHLHWKYRELVK++ K K+ A V+ A LE ESGGI
Sbjct: 595 LGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGI 654
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
L+++++V KG+A++ +RGKNYRRP SLRPRNLL+K KAL RS+ +QRH+ALS+H + L
Sbjct: 655 LVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNR 714
Query: 761 TIEQMKKEIGVSKD-EEDGN--------------------IRCSGDLKQFDHVSVLPQNE 799
+E++K E+ +D +E G+ LK+FD+ V
Sbjct: 715 KVERLKAELVQMEDVKEQGDEELYAKLDAAYSSDDEDMEDEDDEAYLKRFDN-EVAGATA 773
Query: 800 DDDYVSDEDFDSEADE 815
DDD +D+ S ADE
Sbjct: 774 DDD--GSDDYTSAADE 787
>gi|224111046|ref|XP_002315729.1| predicted protein [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| predicted protein [Populus trichocarpa]
Length = 894
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 330/826 (39%), Positives = 480/826 (58%), Gaps = 69/826 (8%)
Query: 1 MALTTSKLTEL-PFRNSLTLTSHSTPSLNHLPFSSSSRKTPSFQLLKPFSSLRTNQNPRT 59
MAL S+ + F++S + H TP L +SSS + ++ T++NP T
Sbjct: 1 MALVPSRQLYIDSFQSSFS-KFHGTP-LQFFRYSSSF----PLRSHSGYACSITDKNPST 54
Query: 60 DSQNQQFPKPRSP----STSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRY 115
S + FP +S ST + W NW++P + + + Y
Sbjct: 55 KSTS--FPTDKSKTLNLSTGSSWFFNWNKP------------NKQNLPRTPQAVFDYRSN 100
Query: 116 SDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRP 174
+ + + + +E+IV +L+ G D E +E + + +ED+ E + P
Sbjct: 101 NSNSSGSGSTMEKIVEKLKKHGYMDGDVNENKER---MQERVIEKGSVEDIFYVEEGMLP 157
Query: 175 NT----------VLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAEL 224
N + +V + + PWE+ ++E + G+ R +LAEL
Sbjct: 158 NARGGFSKESPLGVEDVFRSDGEVRFPWEKPKKE-------EDEGKWTARSKSRTSLAEL 210
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
T+ + ELRRLR + + V G+TQ+V+ IHDKW+ E+ R+K A +MK
Sbjct: 211 TLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEGAPALNMKR 270
Query: 285 AHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPS---SKPQPLDGDGDTLFVPHVSS-TDG 340
HEI+E +TGGLVIWR+G+ + +YRG +Y P+ K + + +P +S T G
Sbjct: 271 MHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNSLPAATSITIG 330
Query: 341 STARSVDE--------KSEVPVRILDHSKPMTEE----EAECNSLLDSLGPRFQEWWGTG 388
S +++ + K+E+ V + + T+ E E + LLD LGPR+ +W G
Sbjct: 331 SQSKNSPDNEIHAPRPKTEINVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLD 390
Query: 389 ILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQG 448
LPVDAD+LP + GY+ PFR+LP G+R L + T LRRLAR LP HFA+GR+R QG
Sbjct: 391 PLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQG 450
Query: 449 LAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFL 508
LAVA++KLWEKS + K+A+KRG+Q T ++ MAE++K LTGG LL RNK ++V YRGKDFL
Sbjct: 451 LAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFL 510
Query: 509 PPNVASALAEREQCAKQIQDVEEKVRSK-TLEATPSGET-EGQAPAGTLAEFYEAQKRWG 566
P V+ AL ERE+ AK +QD EE+ R + + PS E E AG+L E +A +WG
Sbjct: 511 SPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWG 570
Query: 567 REVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYD 626
+ + +EK++ EA +HA +V+R+E KLA +Q K RAER L K+E + PS D
Sbjct: 571 KRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQAD 630
Query: 627 QETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYV 686
E+ITDEER MFR++GLRMKAFL LG RGVFDG VENMHLHWKYRELVK+I K K+ V
Sbjct: 631 PESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQV 690
Query: 687 EDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQ 746
+ A LE ESGG+L++++++ KG+A+I YRGK+Y+RP LRP+NLLTK KAL RS+ +Q
Sbjct: 691 KKIALALEAESGGVLVSVDKISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQ 750
Query: 747 RHEALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHV 792
R EAL H+S LE +E+++ EI E+ G ++ GD + +D +
Sbjct: 751 RSEALQNHVSALEIKVEKIRSEI-----EQMGFVKDKGDEELYDRL 791
>gi|255546121|ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical protein [Ricinus communis]
Length = 930
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/604 (48%), Positives = 384/604 (63%), Gaps = 28/604 (4%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
LPWE+E E G R +R LAE + + EL+RLR + + ERI V
Sbjct: 297 LPWEKERVM------ESVEGYLRGKRSNT-ELAERMLPEHELKRLRNVALRMYERIKVGA 349
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
AG+ QD++ +H+KWR DE+V+LKF E L+ +M+ HEI+E RTGGLVIWR+GS +V+YR
Sbjct: 350 AGINQDLVDAVHEKWRLDEVVKLKFEEPLSFNMRRTHEILENRTGGLVIWRSGSSVVLYR 409
Query: 310 GNNY-------------AGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI 356
G +Y AG P + + V G+T + ++++ +
Sbjct: 410 GISYKLHCVRSFSKQDEAGKEILAHPEEVTSNATLNIGVKHFIGTTESYIPDRAKY---L 466
Query: 357 LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMR 416
D S+ + E N LD LGPRF++W G LPVDADLL GYK PFRLLP G+R
Sbjct: 467 KDLSREELTDFTELNQFLDELGPRFEDWCGREPLPVDADLLLAVDPGYKPPFRLLPYGVR 526
Query: 417 SRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNN 476
LT+ EMT RRLAR++P HFALGRNR QGLA AI+KLWE+S + KIA+KRG+QNT N
Sbjct: 527 HCLTDKEMTIFRRLARTVPPHFALGRNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRN 586
Query: 477 KLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSK 536
+ MAEELK LTGG LL RNK YIV YRG DFLPP + L ER++ QD EE+ R
Sbjct: 587 ERMAEELKVLTGGILLSRNKEYIVFYRGNDFLPPAIVKTLKERKKLTYLKQDEEEQARQM 646
Query: 537 TLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIE 594
L + S + P AGTLAE A W + + + ++M+ EA AK A LVK +E
Sbjct: 647 ALASVESSAKTSKVPLVAGTLAETVAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLE 706
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
+KLA+++ K +AE+ LAK+ + PSG D ETI+DEER +FR++GL MK +L LG R
Sbjct: 707 NKLALAKGKLRKAEKALAKVHEHLDPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKR 766
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
GV+DG +ENMHLHWKYRELVK+I + K+ A V+ A LE ESGG+L++IER KG+A+I
Sbjct: 767 GVYDGTIENMHLHWKYRELVKVIVRGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAII 826
Query: 715 FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
YRGKNY P +RP+NLLTK +AL RS+ +QR EAL HISDL+ IE +K E+ +D
Sbjct: 827 VYRGKNYLHPEVMRPKNLLTKRQALVRSIELQRREALKHHISDLQERIELLKLEL---ED 883
Query: 775 EEDG 778
E G
Sbjct: 884 MESG 887
>gi|255551945|ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical protein [Ricinus communis]
Length = 773
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/670 (44%), Positives = 419/670 (62%), Gaps = 65/670 (9%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
PWE+ + E L E T R + + LAELT+ + ELRRLR ++ ++ V
Sbjct: 74 FPWEKPKREEL----EHEKKWTARSKSRT-QLAELTLPESELRRLRNLTYQIKSKVRVKG 128
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
AG+TQ+V+ IHD+W+ E+VR+K A +M+ HEI+ER+TGGLVIWR+G+ + +YR
Sbjct: 129 AGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYR 188
Query: 310 GNNYAGPSSK-------------------------PQPLDGDGDTLFVPHV---SSTDGS 341
G +Y PS + P D L +PH+ S+ +G
Sbjct: 189 GVSYEDPSVQLNKQILKRNELSNNSLSTATGIIRSPSKSAASSD-LNMPHLNSDSTAEGE 247
Query: 342 TARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
+ ++ ++EV E E + LL+ LGPR+ +W G LPVDAD+LP +
Sbjct: 248 EKKEIEMETEVKY------------EDEVDKLLEGLGPRYTDWAGLDPLPVDADMLPGII 295
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
GY+ PFR+LP G+RS L E T LRRLAR LP HFALGR+R QGLA A++KLWEKS
Sbjct: 296 PGYQPPFRILPYGVRSSLGQKEATSLRRLARILPPHFALGRSRQLQGLADAMIKLWEKSS 355
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AKI++KRG+Q T ++ MAE++K LTGG LL RNK ++V YRGKDFL P V AL ERE+
Sbjct: 356 IAKISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKDFLSPEVTEALVERER 415
Query: 522 CAKQIQDVEE--KVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE 579
A+ +QD EE ++R+ L + E AGTL E +A RWG+ + REK++
Sbjct: 416 LAQSLQDKEEQARLRASALFVQTAETLEQPGTAGTLEETLDADARWGKCLDQNHREKIMR 475
Query: 580 EASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFR 639
EA A+HA LV+++E KLA ++ K ++AER L+K+E + P+ D E+ITDEER MFR
Sbjct: 476 EAEIARHANLVRKLESKLAFAEKKLMKAERALSKVEVFLKPAERQADPESITDEERFMFR 535
Query: 640 RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGG 699
++GLRMKAFL LG RGVFDG VENMHLHWKYRELVK+I K K + V+ A LE ESGG
Sbjct: 536 KLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKNIEQVKKIALALEAESGG 595
Query: 700 ILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLE 759
IL++++RV KG+A+I +RGK+Y+RP LRP NLLTK KAL RS+ +QR EAL +HIS L+
Sbjct: 596 ILVSVDRVSKGYAIIVFRGKDYQRPSKLRPGNLLTKRKALARSIEIQRSEALLKHISALQ 655
Query: 760 NTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHV-SVLPQNEDDD-----------YVSDE 807
+++++ EI + +D GD + +D + + P ++DD Y+S
Sbjct: 656 KKVDKIRYEIAQMEKVKD-----QGDEELYDRLDATYPTDDDDTEEEEDEAYLGAYISKG 710
Query: 808 DFDSEADEDS 817
D +S AD+++
Sbjct: 711 DANSAADDET 720
>gi|449452735|ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 846
Score = 526 bits (1356), Expect = e-146, Method: Compositional matrix adjust.
Identities = 319/729 (43%), Positives = 435/729 (59%), Gaps = 71/729 (9%)
Query: 69 PRSPSTSAPWLNNWS--------RPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDN 120
P + S SAPW + +PK P+ E N++ + S D
Sbjct: 149 PITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEIS----------------KISTDDT 192
Query: 121 KGRNA----IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNT 176
RNA I+ I SDD E E E D + T E+ L ++
Sbjct: 193 SNRNASTISIDEI----------SDDSSEDEAEIDTVVLPVT--EKRSTLSKK------- 233
Query: 177 VLREVEGEEDDSL---LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRR 233
++ V + DD+ LPW+RE R E AG+ R + + LAE + + ELRR
Sbjct: 234 IVHSVSSDNDDNGRVDLPWKREP----RRDSEVDAGQRRSKTL----LAEQMLPEHELRR 285
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
LR + + ERI V G+TQ+++ IH+KW+ DE+V+LKF L +MK AHE +E RT
Sbjct: 286 LRNISLRMVERIEVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRT 345
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPS--SKPQPLDGDGDTLFVPHVSSTDGSTAR-----SV 346
GGLVIWR+GS++V+YRG Y P S + +TL VP+ +D T +V
Sbjct: 346 GGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTV 405
Query: 347 DEKSEVPVRILDHSKPMTEEE----AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVD 402
S + H+K ++++E ++ N LLD +GPRF++W G +PVDADLLP V
Sbjct: 406 GTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVP 465
Query: 403 GYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLV 462
GYK P R+LP G+R L N E+T RRLAR +P HFALGRNR QGLA A++KLWEK +
Sbjct: 466 GYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAI 525
Query: 463 AKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC 522
AKIA+KRG++NT N+ MAEEL+ LTGGTLL RNK YIV YRG D+LPP + AL ER +
Sbjct: 526 AKIAIKRGVENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKL 585
Query: 523 AKQIQDVEEKVRSKTLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEE 580
A + QDVEE+VR A S AP AGTL E A RWG + S + E M E+
Sbjct: 586 ADRQQDVEEQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMRED 645
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
++ AK L++ ++ KLA+++ K AE+++AK++ PS D ETITDEER +FR+
Sbjct: 646 SALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRK 705
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GL MK +L LG RGV+DG VENMHLHWK+RELVK+I + KTL V+ A LE ES G+
Sbjct: 706 IGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGV 765
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
+I++++ KG+ +I YRGKNY RP ++RP+N+LT+ +AL RS+ +QR EAL HI DLE
Sbjct: 766 VISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEE 825
Query: 761 TIEQMKKEI 769
IE +K E+
Sbjct: 826 KIELLKAEL 834
>gi|449529423|ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like, partial [Cucumis sativus]
Length = 789
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 319/729 (43%), Positives = 435/729 (59%), Gaps = 71/729 (9%)
Query: 69 PRSPSTSAPWLNNWS--------RPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDN 120
P + S SAPW + +PK P+ E N++ + S D
Sbjct: 92 PITRSISAPWAHGSQSRNTQFDFKPKTPNGEVINEIS----------------KISTDDT 135
Query: 121 KGRNA----IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNT 176
RNA I+ I SDD E E E D + T E+ L ++
Sbjct: 136 SNRNASTISIDEI----------SDDSSEDEAEIDTVVLPVT--EKRSTLSKK------- 176
Query: 177 VLREVEGEEDDSL---LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRR 233
++ V + DD+ LPW+RE R E AG+ R + + LAE + + ELRR
Sbjct: 177 IVHSVSSDNDDNGRVDLPWKREP----RRDSEVDAGQRRSKTL----LAEQMLPEHELRR 228
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
LR + + ERI V G+TQ+++ IH+KW+ DE+V+LKF L +MK AHE +E RT
Sbjct: 229 LRNISLRMVERIEVGVKGITQELLDSIHEKWKVDEVVKLKFEGPLTVNMKRAHEKLENRT 288
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPS--SKPQPLDGDGDTLFVPHVSSTDGSTAR-----SV 346
GGLVIWR+GS++V+YRG Y P S + +TL VP+ +D T +V
Sbjct: 289 GGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKSNTLDVPNNVESDDITRNEKLHTTV 348
Query: 347 DEKSEVPVRILDHSKPMTEEE----AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVD 402
S + H+K ++++E ++ N LLD +GPRF++W G +PVDADLLP V
Sbjct: 349 GTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEIGPRFKDWSGCEPVPVDADLLPGIVP 408
Query: 403 GYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLV 462
GYK P R+LP G+R L N E+T RRLAR +P HFALGRNR QGLA A++KLWEK +
Sbjct: 409 GYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPPHFALGRNRQLQGLANAMVKLWEKCAI 468
Query: 463 AKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC 522
AKIA+KRG++NT N+ MAEEL+ LTGGTLL RNK YIV YRG D+LPP + AL ER +
Sbjct: 469 AKIAIKRGVENTRNERMAEELRILTGGTLLSRNKEYIVFYRGNDYLPPTITEALKERRKL 528
Query: 523 AKQIQDVEEKVRSKTLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEE 580
A + QDVEE+VR A S AP AGTL E A RWG + S + E M E+
Sbjct: 529 ADRQQDVEEQVRQVASAAIESKVKASNAPLVAGTLTETIAATSRWGSQPSGHDIENMRED 588
Query: 581 ASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRR 640
++ AK L++ ++ KLA+++ K AE+++AK++ PS D ETITDEER +FR+
Sbjct: 589 SALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKLQEKKEPSDLPTDLETITDEERLLFRK 648
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+GL MK +L LG RGV+DG VENMHLHWK+RELVK+I + KTL V+ A LE ES G+
Sbjct: 649 IGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELVKIIVRGKTLQQVKHVAISLEAESNGV 708
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
+I++++ KG+ +I YRGKNY RP ++RP+N+LT+ +AL RS+ +QR EAL HI DLE
Sbjct: 709 VISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLTRRQALARSIELQRREALKHHILDLEE 768
Query: 761 TIEQMKKEI 769
IE +K E+
Sbjct: 769 KIELLKAEL 777
>gi|242044486|ref|XP_002460114.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
gi|241923491|gb|EER96635.1| hypothetical protein SORBIDRAFT_02g022940 [Sorghum bicolor]
Length = 962
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 279/593 (47%), Positives = 388/593 (65%), Gaps = 15/593 (2%)
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248
LLPWEREEE++ G G RR LAE TI + ELRRLR + ++ERI V
Sbjct: 322 LLPWEREEEDDEAFSG----GRVGRR--SNTELAERTIPEPELRRLRDTALRMKERIKVG 375
Query: 249 KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
G+TQD++ IH KW+ DE+V+++F + +MK H+++E RTGG+VIWR+G +V+Y
Sbjct: 376 PGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVLY 435
Query: 309 RGNNY--AGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEE 366
RG NY S + ++ D S+ ++ + E + L ++ + E
Sbjct: 436 RGMNYNLQCVQSYAKSIETDSGKEVDDASSAVSSHGGHNLQDSREAGAKRLTSTENFSLE 495
Query: 367 EAE---CNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAE 423
+E ++ LD LGPR+++W G G +PVDADLLP V GYK PFR+LP ++S L + E
Sbjct: 496 SSETFDIDNFLDQLGPRYRDWSGRGPVPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDKE 555
Query: 424 MTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEEL 483
MT LRRL+R HFALGRNR HQGLA A++KLWEKS +AKIA+KRG+ NT N MAEE+
Sbjct: 556 MTTLRRLSRQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGVPNTCNDRMAEEI 615
Query: 484 KSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR---SKTLEA 540
K LTGG LL RNK YIV YRG DF+ P V L E+++ A QD EE R S ++
Sbjct: 616 KKLTGGVLLSRNKEYIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASASIIT 675
Query: 541 TPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVS 600
P G +G AGTL E EA+ RWG ++ ++RE+ ++ S KH L+K ++ KL ++
Sbjct: 676 VPKG-IKGPLVAGTLTETTEAKSRWGMSLNDKQREEEMKRLSLLKHTSLLKNLKRKLILA 734
Query: 601 QAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
+ K +AER LAK++ + P+ D ET+TDEER +FRR+GL+M+AFL LG R VFDG
Sbjct: 735 KTKVAKAERALAKVQEFLSPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGT 794
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
V+NMHLHWK+RELVK+I + K+ A V+ A LE ES G+LI++++ KG+A+IFYRGKN
Sbjct: 795 VQNMHLHWKHRELVKIIVRGKSFAQVKHIAISLEAESEGVLISLDKTSKGYAIIFYRGKN 854
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSK 773
YRRP ++PRNLLT+ +AL RS+ +QR EAL HIS L+ I +++ ++ +K
Sbjct: 855 YRRPQIMKPRNLLTRRQALARSIELQRREALKHHISSLQGKIWKLQSQLVQTK 907
>gi|357156286|ref|XP_003577404.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 881
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 308/719 (42%), Positives = 429/719 (59%), Gaps = 50/719 (6%)
Query: 77 PWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNL 136
PWL+ WSRP+ A L R + S D S + GR+ + I+ RL+
Sbjct: 31 PWLSAWSRPRRGLRPPAPALDLRPEPSPTSDS-DEEDSVGTSRHAGRSTMSLILRRLQRA 89
Query: 137 GLGSDDEEEGEEEEDDINGAATGEER-----LEDLLRR-EWVRPNT---VLREVEGEEDD 187
G E AAT +ED+ R + V PN + E D
Sbjct: 90 GYSP---------EPQAAHAATASRHPQRGSVEDVFRADDGVLPNARGGFDDDAESSLVD 140
Query: 188 SLLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRRLRRNGMYLRERIN 246
+ PWER P E R K+P +AELT+ + ELRRLR M ++ RI
Sbjct: 141 ARFPWER----------PMPPPEAAARATKSPVWMAELTLPEAELRRLRHATMRIKSRIQ 190
Query: 247 VPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMV 306
V AG+T++++ KI +KW+ DE+VR+K A +M+ HEI+ER+TGGLVIWR+G+ +
Sbjct: 191 VGGAGVTREIVAKIKEKWKTDEVVRVKVSGTPALNMRLFHEILERKTGGLVIWRSGTSVS 250
Query: 307 VYRGNNYAGPSSKP------QPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDH- 359
+YRG Y P + Q L P SS + ++ V + ++
Sbjct: 251 LYRGVAYDVPETTKGTNRNWQALGMKSSINIPPMPSSLPNEKVNGMQDRVGALVAVTENE 310
Query: 360 ----SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGM 415
+ P + E E + LLD LGPR+ +W G+ LPVDADLLP V GYK PFR+LP G+
Sbjct: 311 ETAETVPEIKYEEEIDRLLDELGPRYSDWPGSNPLPVDADLLPATVPGYKPPFRVLPYGV 370
Query: 416 RSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
R L+ + T+LRRL R LP HFALGR+R QGLA A++KLWE+S +AKIA+KRG+Q T
Sbjct: 371 RRSLSRKDTTNLRRLGRGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKIALKRGVQLTT 430
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRS 535
++ MAE+LK LTGG +L RN ++V YRGKDFL +A L ERE+ K +QD EE+ R
Sbjct: 431 SERMAEDLKKLTGGVMLSRNNDFVVFYRGKDFLSSELAEVLLERERSMKSLQD-EEQAR- 488
Query: 536 KTLEATPSGETEGQA-----PAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLV 590
L+ TPS + +A AGTL E EA ++G +V +KM + AKHA +V
Sbjct: 489 --LDRTPSFASSTEAFIEPSVAGTLEETLEANSKYGNKVDENHMDKMTKTVEAAKHADVV 546
Query: 591 KRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLP 650
+++E KL++++ + +AER+L K+E ++ PS ETIT+EER MFR++GLRMKAFL
Sbjct: 547 RKLEWKLSLAEKRIAKAERVLGKVETALKPSEDTNPHETITEEERFMFRKLGLRMKAFLL 606
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG RGVFDG +ENMHLHWKYRELVK++ K K+ V+ A LE ESGGIL+++++V KG
Sbjct: 607 LGRRGVFDGTIENMHLHWKYRELVKILVKVKSFTEVKRIALSLEVESGGILVSVDKVSKG 666
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+A++ +RGK+YRRP LRPRNLL+K KAL RS+ +QR +AL++HI L + Q++ E+
Sbjct: 667 YAIVVFRGKDYRRPSMLRPRNLLSKRKALARSIEIQRMQALNRHIGKLNRRVNQLRSEL 725
>gi|242071513|ref|XP_002451033.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
gi|241936876|gb|EES10021.1| hypothetical protein SORBIDRAFT_05g022980 [Sorghum bicolor]
Length = 895
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 316/743 (42%), Positives = 436/743 (58%), Gaps = 68/743 (9%)
Query: 73 STSAP--WLNNWSRPK----------PPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDN 120
STSAP WL+ WS P PP + + + + + S +
Sbjct: 24 STSAPYPWLSAWSHPGQRSRSRLRAPPPPALDLRPEPSPSSDSDDEDA------VGTSRS 77
Query: 121 KGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEE----RLEDLLRRE-WVRPN 175
GR+ + I+ RLR G ED AA+ +ED+ R + V PN
Sbjct: 78 SGRSTMSLILSRLRRAGYSP--------AEDPRAAAASSHHPPRGSVEDVFRADDGVLPN 129
Query: 176 T--VLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELR 232
+ E D+ PWER R ++PT +AELT+ ELR
Sbjct: 130 ARGGFDAADEELGDARFPWERPMPPPE---------AAPPRATRSPTWMAELTLPAAELR 180
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
RLR + ++ R V AG+T++++ KI +KW+ +E+VR+K A +M+ HEI+ER+
Sbjct: 181 RLRHAAIRIKSRTKVGGAGVTREIVEKIKEKWKTEEVVRVKVSGTPALNMRLFHEILERK 240
Query: 293 TGGLVIWRAGSVMVVYRGNNYAGPS------------SKPQPLDGDGDTLFVP-----HV 335
TGGLVIWR+G+ + +YRG +Y P S P+ G + P V
Sbjct: 241 TGGLVIWRSGTSVSLYRGVDYDEPETTKGSKKNSQSLSMKSPIKGSPNPPLPPTEKANSV 300
Query: 336 SSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDAD 395
+G + K E+ V+ P + E E + LLD LGPR+ +W G+ LPVDAD
Sbjct: 301 QDRNGPLVSNAG-KEEIVVQA-----PEIKYEDEIDKLLDELGPRYTDWPGSDPLPVDAD 354
Query: 396 LLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILK 455
LLP V GYK PFR+LP G+R L+ + T+LRRLAR LP HFALGR+R QGLA A++K
Sbjct: 355 LLPATVPGYKPPFRVLPYGVRPSLSRMDTTNLRRLARGLPPHFALGRSRQLQGLANAMVK 414
Query: 456 LWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASA 515
LWEKS +AK+A+KRG+Q T ++ MAE++K LTGG +L RN +IV YRGKDFL +A
Sbjct: 415 LWEKSSIAKVALKRGVQLTTSERMAEDIKKLTGGVMLSRNNEFIVFYRGKDFLSSELAEV 474
Query: 516 LAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEER 574
L ERE+ AK +QD EE R + S E Q AGTL E EA ++G ++
Sbjct: 475 LLERERLAKSLQDEEEARRKAASYFSSSAEKYVQPTVAGTLGETLEANSKYGTKLDENHE 534
Query: 575 EKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEE 634
+KM A+HA LV+++E KL+++Q K +AER+L K+E ++ P+ D ETITDEE
Sbjct: 535 DKMARTVEAARHADLVRKLEWKLSLAQKKMEKAERVLGKVETALRPT-EDSRPETITDEE 593
Query: 635 RAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLE 694
R MFR++GLRMKAFL LG RGVFDG +ENMHLHWKYRELVK++ K K+ A V+ A LE
Sbjct: 594 RFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLE 653
Query: 695 YESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQH 754
ESGGIL+++++V KG+A++ +RGKNYRRP SLRPRNLL+K KAL RS+ +QRH+ALS+H
Sbjct: 654 AESGGILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRH 713
Query: 755 ISDLENTIEQMKKEIGVSKDEED 777
+ L + Q+K E+ +D +D
Sbjct: 714 FAKLNRKVAQLKAELVQMEDVKD 736
>gi|297831030|ref|XP_002883397.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
gi|297329237|gb|EFH59656.1| hypothetical protein ARALYDRAFT_898801 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 332/794 (41%), Positives = 459/794 (57%), Gaps = 75/794 (9%)
Query: 25 PSLNHLPFSSSSRKTPSFQ------LLKPFSSLR--TNQNPRTDSQNQQFPKPRSP---- 72
PSL+ P + + + SFQ ++ SS+ + + S+N Q P R
Sbjct: 5 PSLHFYPTTVTKKFVYSFQSSFCSRFIRYSSSISIGSCKGVVFSSRNYQIPSRRFSFSRD 64
Query: 73 STSAPWLNNWSR------PKPPSTE-NANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNA 125
+ WL NW+R PKPP N K GG S DN+ R+
Sbjct: 65 GNNGEWLENWNRIQKRNQPKPPKVVVNYRKEGGI---------------VSGDDNRSRDG 109
Query: 126 ----IERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLR-REWVRPNT---- 176
+E+IV +L+ G EE +E + G +ED+ E PNT
Sbjct: 110 EGSTMEKIVEKLKKYGYMEKGEEVQNKEIEQERRIEKGS--VEDIFYVEEGNLPNTRGGF 167
Query: 177 ----VL--REVEGEEDDSLLPWER---EEEENLRAGGEKPAGETRRRRMKAPTLAELTIE 227
+L +V G + PWE+ +E++ L A E ++ +LAE+T+
Sbjct: 168 TEESLLGRDDVFGSNGEVGFPWEKMSAKEKKELEA-------EWTAKKENRYSLAEMTLP 220
Query: 228 DEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHE 287
+ ELRRLR ++ + AG+TQ + I +KW+ E+VRLK A +M+ HE
Sbjct: 221 ESELRRLRNLTFRTASKMRIRGAGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHE 280
Query: 288 IVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK-------PQPLDGDGDTLFVPHVSSTDG 340
I+E++TGGLVIWR+G+ + +YRG +Y PS K P +T V ++DG
Sbjct: 281 ILEKKTGGLVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPSSLPET--TTMVDNSDG 338
Query: 341 STARSVDEKSEVPVRILDH-SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399
E+ V D S+P E E E + LLD LGPRF +W G LPVDADLLP
Sbjct: 339 KVHLPQLEQVTTSVEKKDQTSQPDVEYEDEIDELLDGLGPRFMDWPGDNPLPVDADLLPG 398
Query: 400 KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459
+ GY+ PFR+LP G+RS L E T LRRLARS+P HFALGR+R QGLA A+++LWEK
Sbjct: 399 AIPGYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEK 458
Query: 460 SLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAER 519
S++AKIA+KRG+Q+T ++ MAE+LK LTGG LL RNK ++V YRGK+FL VA AL E+
Sbjct: 459 SMLAKIAIKRGVQSTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSREVADALVEQ 518
Query: 520 EQCAKQIQDVEEKVRSKTLEA--TPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREK 576
E+ + +QD EE+ R + A P E + AGTL E +A +WG+ + ++
Sbjct: 519 ERFVRTLQDEEEQARLRGSSALIVPCIEPPKKLVSAGTLGETLDATGKWGKNLDDDDHSD 578
Query: 577 MV-EEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEER 635
V +E +H LV+++E KLA ++ K L+AER LAK+E + P+ D ++ITDEER
Sbjct: 579 EVKQEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEECLKPAEQREDPDSITDEER 638
Query: 636 AMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEY 695
MFR++GL+MKAFL LG RGVFDG VENMHLHWKYRELVK+I K KT V+ A LE
Sbjct: 639 FMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEA 698
Query: 696 ESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHI 755
ESGGIL++I++V KG+A+I YRGK+Y+RP LRP+NLLTK KAL RS+ +QR E L +HI
Sbjct: 699 ESGGILVSIDKVTKGYAIIVYRGKDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHI 758
Query: 756 SDLENTIEQMKKEI 769
S ++ EQ++ EI
Sbjct: 759 STMQAKAEQLRAEI 772
>gi|414885161|tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/593 (46%), Positives = 386/593 (65%), Gaps = 13/593 (2%)
Query: 188 SLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINV 247
+LLPWEREEE++ G R R LAE +I + ELRRLR + ++ERI V
Sbjct: 325 ALLPWEREEEDDEAFSG------GRAVRRSNTELAERSIPEPELRRLRDTALRMKERIKV 378
Query: 248 PKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVV 307
G+TQD++ IH KW+ DE+V+++F + +MK H+++E RTGG+VIWR+G +V+
Sbjct: 379 GPGGVTQDIVESIHRKWKVDEVVKMRFEGPPSLNMKRTHDLLEDRTGGVVIWRSGRSVVL 438
Query: 308 YRGNNY----AGPSSKPQPLD-GDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKP 362
YRG NY +K +D G G + V S DG ++ + +
Sbjct: 439 YRGMNYNFQCVQSYAKFIEIDSGKGVSDANSAVLSHDGHNLQASRADGMKSLTSTGNFSL 498
Query: 363 MTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNA 422
+ E + ++ LD LGPR+++W G G +PVDADLLP V GYK PFR+LP ++S L +
Sbjct: 499 ESSETFDIDNFLDQLGPRYKDWSGRGPIPVDADLLPGVVHGYKPPFRVLPYKIKSTLRDK 558
Query: 423 EMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEE 482
EMT LRRLAR HFALGRNR HQGLA A++KLWEKS +AKIA+KRGI NT N MAEE
Sbjct: 559 EMTTLRRLARQTAPHFALGRNREHQGLAAAMVKLWEKSAIAKIAIKRGIPNTCNDRMAEE 618
Query: 483 LKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEA-- 540
+K LTGG LL RNK +IV YRG DF+ P V L E+++ A QD EE R K +
Sbjct: 619 IKKLTGGVLLSRNKEFIVFYRGNDFIAPKVRQVLVEKQEQAITQQDEEELARLKASASII 678
Query: 541 TPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVS 600
T + +G AGTLAE EA+ RWG+ V+ ++RE+ ++ S KH L+K ++ KL ++
Sbjct: 679 TIPKDIKGPLVAGTLAETTEAKSRWGKSVNDKQREEEMKHLSLLKHTSLLKNLKRKLILA 738
Query: 601 QAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
+ K +AE+ LAK++ + P+ D ET+TDEER +FRR+GL+M+AFL LG R VFDG
Sbjct: 739 KTKVAKAEKALAKVQEFLTPAELPTDLETVTDEERFLFRRIGLKMRAFLMLGRREVFDGT 798
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
V+NMHLHWK+RELVK++ + K+ A + A LE ES G+LI++++ KG+ +IFYRGKN
Sbjct: 799 VQNMHLHWKHRELVKIVVRGKSFAQAKHIAISLEAESEGVLISLDKTTKGYVIIFYRGKN 858
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSK 773
YRRP ++PRNLLT+ +AL RS+ +QR EAL HIS L+ I +++ ++ +K
Sbjct: 859 YRRPQIMKPRNLLTRRQALARSIELQRREALKHHISSLQGKISKLQSQLVQTK 911
>gi|326492672|dbj|BAJ90192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 306/726 (42%), Positives = 428/726 (58%), Gaps = 49/726 (6%)
Query: 77 PWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNL 136
PWL+ WSRP+ A L R + S D S + GR+ + I+ RL+
Sbjct: 47 PWLSAWSRPRRGLRPPAPALDLRPEPSPTSGSDDE-DAVGTSRHSGRSTMSLILHRLKRA 105
Query: 137 GLGSDDEEEGEEEEDDINGAATGEE----RLEDLLRRE-WVRPNT---VLREVEGEEDDS 188
G E I + + +ED+ R + V PN + E D+
Sbjct: 106 GYSL---------EAQIPPSTFSQHPRRGSVEDVFRADDGVLPNARGGFDDDAESSLMDA 156
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248
PWER R +AELT+ + ELRRLR M ++ + V
Sbjct: 157 RFPWERPMPPPE---------AAARAARSPAWMAELTLPEPELRRLRHAAMRIKSKTQVG 207
Query: 249 KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
AG+T++++ KI +KWR DE+VR+K + A +M+ HEI+ER+TGGLVIWR+G+ + +Y
Sbjct: 208 GAGVTREIVAKIKEKWRTDEVVRVKVNGTPALNMRLFHEILERKTGGLVIWRSGTSVSLY 267
Query: 309 RGNNYAGPSSKP------------QPLDGDGDTLFVPH--VSSTDGSTARSVD--EKSEV 352
RG Y P + + G +P+ V+S GS V EK E
Sbjct: 268 RGVAYDVPDTTKGTNRTWQDVGMKSSIKGPPIPSSIPNEKVNSMQGSNGGLVSNTEKEEA 327
Query: 353 PVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLP 412
+ P + E E LLD LGPR+ +W G+ LPVDADLLP + GYK PFR+LP
Sbjct: 328 IETV-----PEIKYEEEIGRLLDELGPRYSDWPGSNPLPVDADLLPATIPGYKPPFRVLP 382
Query: 413 TGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQ 472
G+R L+ + T+LRRLAR LP HFALGR+R QGLA A++KLWE+S +AK+A+KRG+Q
Sbjct: 383 YGVRRSLSRKDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWERSSIAKVALKRGVQ 442
Query: 473 NTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEK 532
T ++ MAE++K LTGG +L RN ++V YRGKDFL +A AL ERE+ K +QD E+
Sbjct: 443 LTTSERMAEDIKKLTGGVMLSRNNDFVVFYRGKDFLSTELAEALLERERSMKSLQDEEQA 502
Query: 533 VRSKTLEATPSGETEGQAP-AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVK 591
+ L T S E ++ AGTL E EA ++G E+ +KM AKHA LV+
Sbjct: 503 RLNAKLSFTSSTEAFIESTVAGTLGETLEANSKYGNELVDNHVDKMTRTVEAAKHADLVR 562
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
++E KLA+++ + +AER+L K+E ++ P+ ETITDEER MFR++GLRMKAFL L
Sbjct: 563 KLEWKLALAEKRIAKAERVLGKVETALKPTEDTKPPETITDEERFMFRKLGLRMKAFLLL 622
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVFDG +ENMHLHWKYRELVK++ K K+ A V+ TA LE ESGG+L+++++V KG+
Sbjct: 623 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRTALSLEVESGGVLVSVDKVSKGY 682
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGV 771
A++ +RGK+Y+RP LRPRNLL+K KAL RS+ +QR EAL +HI L + Q++ E+
Sbjct: 683 AIVVFRGKDYKRPSMLRPRNLLSKRKALARSIELQRMEALGRHIEKLNRRVNQLRSELVQ 742
Query: 772 SKDEED 777
+D +D
Sbjct: 743 MEDVKD 748
>gi|30686898|ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
gi|332643191|gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana]
Length = 881
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 325/791 (41%), Positives = 457/791 (57%), Gaps = 64/791 (8%)
Query: 25 PSLNHLPFSSSSRKTPSFQLLKPFSSLR--------TNQNPRTDSQNQQFPKPRSP---- 72
PSL+ P + + + SFQ F LR + + S+N Q R
Sbjct: 5 PSLHFCPTTVTKKFVYSFQSSFCFRFLRYSSSISLGSCKGVTFSSRNDQIASRRFSFSRD 64
Query: 73 STSAPWLNNWSR------PKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAI 126
+ WL NW+R PKPP + GR E + D+ R D + +
Sbjct: 65 CNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEIVSGDDNRSRDGDG-----STM 119
Query: 127 ERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVR-PNT--------V 177
E+IV +L+ G + + + E+E I + +ED+ E + PNT +
Sbjct: 120 EKIVEKLKKYGYMEEVQNKEIEQERRIEKGS-----VEDIFYVEEGKLPNTRGGFTEESL 174
Query: 178 L--REVEGEEDDSLLPWER---EEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELR 232
L V G D PWE+ +E++ L A E ++ +LAE+T+ + ELR
Sbjct: 175 LGGENVIGSNGDVGFPWEKMSAKEKKELEA-------EWTAKKENRYSLAEMTLPESELR 227
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
RLR ++ + G+TQ + I +KW+ E+VRLK A +M+ HEI+E++
Sbjct: 228 RLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKK 287
Query: 293 TGGLVIWRAGSVMVVYRGNNYAGPSSK----------PQPLDGDGDTLFVPHVSSTDGST 342
TGGLVIWR+G+ + +YRG +Y PS K P+ + + D V +D
Sbjct: 288 TGGLVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDET-TTMVDKSDEKV 346
Query: 343 ARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVD 402
E+ V D + P+ E E E + LLD LGPRF +W G LPVDADLLP +
Sbjct: 347 HLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIP 406
Query: 403 GYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLV 462
Y+ PFR+LP G+RS L E T LRRLARS+P HFALGR+R QGLA A+++LWEKS++
Sbjct: 407 DYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSML 466
Query: 463 AKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC 522
AKIA+KRG+Q+T ++ MAE+LK LTGG +L RNK ++V YRGK+FL VA AL E+E+
Sbjct: 467 AKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERF 526
Query: 523 AKQIQDVEEKVRSKTLEA--TPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREKMV- 578
+ +QD EE+ R + A PS E + AGTL E +A +WG+ + ++ V
Sbjct: 527 VRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVK 586
Query: 579 EEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMF 638
+E +H LV+++E KLA ++ K L+AER LAK+E + P+ D E+ITDEER MF
Sbjct: 587 QEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMF 646
Query: 639 RRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESG 698
R++GL+MKAFL LG RGVFDG VENMHLHWKYRELVK+I K KT V+ A LE ESG
Sbjct: 647 RKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESG 706
Query: 699 GILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
GIL++I++V KG+A+I YRG++Y+RP LRP+NLLTK KAL RS+ +QR E L +HIS +
Sbjct: 707 GILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTM 766
Query: 759 ENTIEQMKKEI 769
+ +Q++ EI
Sbjct: 767 QAKAKQLRAEI 777
>gi|77551737|gb|ABA94534.1| CRS1/YhbY domain containing protein, expressed [Oryza sativa
Japonica Group]
Length = 886
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 301/660 (45%), Positives = 406/660 (61%), Gaps = 67/660 (10%)
Query: 187 DSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERIN 246
D+ PWE P R R KA +AELT+ + ELRRLR GM L+ RI
Sbjct: 146 DARFPWELPMP--------PPEAGPRAARSKA-WMAELTLPEAELRRLRHAGMRLKSRIK 196
Query: 247 VPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMV 306
V AG+T++++ +I D+WR DE+VR+K A +M+ HEI+ER+TGGLVIWR+G+ +
Sbjct: 197 VGGAGVTREIVERIRDRWRNDEVVRIKVTGTPALNMRLFHEILERKTGGLVIWRSGTSVS 256
Query: 307 VYRGNNY------AGPSSKPQPL-------DGDGDTLF----VPHVSSTDGSTARSVDEK 349
+YRG Y G S Q L + G +L V + +G+ + ++
Sbjct: 257 LYRGVAYDIPEPTKGTSKNTQTLGMKSSIKEPPGHSLLPNEKVNEMQDNNGALVSNAEKD 316
Query: 350 SEV-PVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPF 408
+ V PV P + E E + LLD LGPR+ +W PVDADLLP V GYK PF
Sbjct: 317 TLVEPV-------PEIKYEDEIDKLLDELGPRYDDWPRPDPSPVDADLLPATVPGYKPPF 369
Query: 409 RLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVK 468
R+LP G+R L+ + T+LRRLAR LP HFALGR+R QGLA A++KLWEKS +AKIA+K
Sbjct: 370 RVLPYGVRPSLSRRDTTNLRRLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIAKIALK 429
Query: 469 RGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQD 528
RG+Q T ++ MAE++K LTGG +L RN ++V YRGKDFL P +A L ERE+ AK +QD
Sbjct: 430 RGVQLTTSERMAEDIKKLTGGVMLSRNNDFMVFYRGKDFLSPELAEKLLERERWAKSLQD 489
Query: 529 VEEKVRSKTLEATPSGETEGQAP-----AGTLAEFYEAQKRWGREVSAEEREKMVEEASK 583
EE+ R L A S + +AP AGTL E EA ++G ++ KM
Sbjct: 490 -EEQAR---LNAASSFSSRTEAPVEPTVAGTLGETLEANSKYGNKLDENYENKMTRTVEA 545
Query: 584 AKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGL 643
A+HA LV+++E KL ++Q K +AER+L K+E ++ P+ ETITDEER MFR++GL
Sbjct: 546 ARHADLVRKLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGL 605
Query: 644 RMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIA 703
RMKAFL LG RGVFDG +ENMHLHWKYRELVK++ K K+ V+ A LE ESGGIL++
Sbjct: 606 RMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVS 665
Query: 704 IERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIE 763
+++V KG+A++ +RGK+Y RP LRPRNLL+K KAL RS+ +QR EALS HI+ L ++
Sbjct: 666 VDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVK 725
Query: 764 QMKKEI----GVSKDEEDGNIRCSGD------------------LKQFDHVSVLPQNEDD 801
++K E+ GV K+E D + D L+ FD+ SV QN DD
Sbjct: 726 KLKAELLQMEGV-KEEGDVELYAKLDSAYSSDEEDVEDEDDEAYLRSFDN-SVAVQNGDD 783
>gi|296087726|emb|CBI34982.3| unnamed protein product [Vitis vinifera]
Length = 1028
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 293/697 (42%), Positives = 409/697 (58%), Gaps = 68/697 (9%)
Query: 117 DSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGE-----------ERLED 165
D+ + AI+RI +LR+LG DE D + GE R+
Sbjct: 73 DAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGH 132
Query: 166 LLRREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAEL 224
+ + W P N V G LR ++ R+ +APTLAEL
Sbjct: 133 TIDQSWSLPENPVPEPGTGGVITRF--------HELRKEVKREKKLVRKEDERAPTLAEL 184
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
T+ +EELRRL+ G+ +R+++ V KAG+T+ ++ IH++WR+ E+V+++ ++ +MK
Sbjct: 185 TLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKR 244
Query: 285 AHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP---------------------------S 317
H+I+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 245 THDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHD 304
Query: 318 SKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEV-----PVRILDHSKPMTEEEAECNS 372
K G GD V S A + S + P R+ + E E +
Sbjct: 305 GKEVCSSGKGD------VKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADR 358
Query: 373 LLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLAR 432
LLD LGPRF +WWG LP+DADLLP V GY+ PFRLLP G++ +LTN EMT LRRL R
Sbjct: 359 LLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGR 418
Query: 433 SLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLL 492
LPCHFALGRNR QGLA +++KLWEK +AKIAVKRG+QNTN+++MAEELK+LTGGTLL
Sbjct: 419 PLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLL 478
Query: 493 QRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPA 552
R++ +IV YRGKDFLPP V+SA+ R + I ++K+ L E +
Sbjct: 479 SRDREFIVFYRGKDFLPPAVSSAIEARRKYG--IHRGKQKIDHHRLAINAE---ESELGT 533
Query: 553 GTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLA 612
A + ++ ++ + +M+ A +V+R KL+++ KK RAE+LLA
Sbjct: 534 SEHASDKDCDGTDDQKTNSLSKRRMLRSAEA-----VVERTNIKLSMALEKKERAEKLLA 588
Query: 613 KIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRE 672
++E + +P P+ D+E IT+EER M R+VGLRMK FL LG RG+FDG VENMHLHWKYRE
Sbjct: 589 ELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRE 648
Query: 673 LVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNL 732
LVK+I+ +++ + AR LE ESGGIL+A+ERV KG+A+I YRGKNY+RP SLRP+ L
Sbjct: 649 LVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTL 708
Query: 733 LTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
L K +ALKRS+ QR E+L H+ L I+++K ++
Sbjct: 709 LNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQL 745
>gi|225452572|ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1044
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 293/697 (42%), Positives = 409/697 (58%), Gaps = 68/697 (9%)
Query: 117 DSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGE-----------ERLED 165
D+ + AI+RI +LR+LG DE D + GE R+
Sbjct: 73 DAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGH 132
Query: 166 LLRREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAEL 224
+ + W P N V G LR ++ R+ +APTLAEL
Sbjct: 133 TIDQSWSLPENPVPEPGTGGVITRF--------HELRKEVKREKKLVRKEDERAPTLAEL 184
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
T+ +EELRRL+ G+ +R+++ V KAG+T+ ++ IH++WR+ E+V+++ ++ +MK
Sbjct: 185 TLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKR 244
Query: 285 AHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP---------------------------S 317
H+I+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 245 THDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHD 304
Query: 318 SKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEV-----PVRILDHSKPMTEEEAECNS 372
K G GD V S A + S + P R+ + E E +
Sbjct: 305 GKEVCSSGKGD------VKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADR 358
Query: 373 LLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLAR 432
LLD LGPRF +WWG LP+DADLLP V GY+ PFRLLP G++ +LTN EMT LRRL R
Sbjct: 359 LLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGR 418
Query: 433 SLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLL 492
LPCHFALGRNR QGLA +++KLWEK +AKIAVKRG+QNTN+++MAEELK+LTGGTLL
Sbjct: 419 PLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLL 478
Query: 493 QRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPA 552
R++ +IV YRGKDFLPP V+SA+ R + I ++K+ L E +
Sbjct: 479 SRDREFIVFYRGKDFLPPAVSSAIEARRKYG--IHRGKQKIDHHRLAINAE---ESELGT 533
Query: 553 GTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLA 612
A + ++ ++ + +M+ A +V+R KL+++ KK RAE+LLA
Sbjct: 534 SEHASDKDCDGTDDQKTNSLSKRRMLRSAEA-----VVERTNIKLSMALEKKERAEKLLA 588
Query: 613 KIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRE 672
++E + +P P+ D+E IT+EER M R+VGLRMK FL LG RG+FDG VENMHLHWKYRE
Sbjct: 589 ELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRE 648
Query: 673 LVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNL 732
LVK+I+ +++ + AR LE ESGGIL+A+ERV KG+A+I YRGKNY+RP SLRP+ L
Sbjct: 649 LVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTL 708
Query: 733 LTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
L K +ALKRS+ QR E+L H+ L I+++K ++
Sbjct: 709 LNKREALKRSLEAQRRESLKLHVLRLTRNIDELKHQL 745
>gi|9294196|dbj|BAB02098.1| unnamed protein product [Arabidopsis thaliana]
Length = 850
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 322/779 (41%), Positives = 450/779 (57%), Gaps = 71/779 (9%)
Query: 25 PSLNHLPFSSSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPSTSAPWLNNWSR 84
PSL+ P + + + SFQ F LR N WL NW+R
Sbjct: 5 PSLHFCPTTVTKKFVYSFQSSFCFRFLRDCNN-------------------GVWLENWNR 45
Query: 85 ------PKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGL 138
PKPP + GR E + D+ R D + +E+IV +L+ G
Sbjct: 46 IQKRNQPKPPKVVVNYRKEGRFSGSEIVSGDDNRSRDGDG-----STMEKIVEKLKKYGY 100
Query: 139 GSDDEEEGEEEEDDINGAATGEERLEDLLRREWVR-PNT--------VL--REVEGEEDD 187
+ + + E+E I + +ED+ E + PNT +L V G D
Sbjct: 101 MEEVQNKEIEQERRIEKGS-----VEDIFYVEEGKLPNTRGGFTEESLLGGENVIGSNGD 155
Query: 188 SLLPWER---EEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
PWE+ +E++ L A E ++ +LAE+T+ + ELRRLR +
Sbjct: 156 VGFPWEKMSAKEKKELEA-------EWTAKKENRYSLAEMTLPESELRRLRNLTFRTASK 208
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
+ + G+TQ + I +KW+ E+VRLK A +M+ HEI+E++TGGLVIWR+G+
Sbjct: 209 MRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKKTGGLVIWRSGTS 268
Query: 305 MVVYRGNNYAGPSSK----------PQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPV 354
+ +YRG +Y PS K P+ + + D V +D E+ V
Sbjct: 269 ISLYRGVSYELPSGKWNKQRREETPPEAVIENHDET-TTMVDKSDEKVHLPQLEQETTSV 327
Query: 355 RILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414
D + P+ E E E + LLD LGPRF +W G LPVDADLLP + Y+ PFR+LP G
Sbjct: 328 EKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIPDYEPPFRVLPYG 387
Query: 415 MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474
+RS L E T LRRLARS+P HFALGR+R QGLA A+++LWEKS++AKIA+KRG+Q+T
Sbjct: 388 VRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSMLAKIAIKRGVQST 447
Query: 475 NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534
++ MAE+LK LTGG +L RNK ++V YRGK+FL VA AL E+E+ + +QD EE+ R
Sbjct: 448 TSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERFVRTLQDEEEQAR 507
Query: 535 SKTLEA--TPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREKMV-EEASKAKHARLV 590
+ A PS E + AGTL E +A +WG+ + ++ V +E +H LV
Sbjct: 508 LRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVKQEVEILRHENLV 567
Query: 591 KRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLP 650
+++E KLA ++ K L+AER LAK+E + P+ D E+ITDEER MFR++GL+MKAFL
Sbjct: 568 RKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMFRKLGLKMKAFLL 627
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG RGVFDG VENMHLHWKYRELVK+I K KT V+ A LE ESGGIL++I++V KG
Sbjct: 628 LGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGILVSIDKVTKG 687
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+A+I YRG++Y+RP LRP+NLLTK KAL RS+ +QR E L +HIS ++ +Q++ EI
Sbjct: 688 YAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAKAKQLRAEI 746
>gi|255552728|ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
gi|223543418|gb|EEF44949.1| conserved hypothetical protein [Ricinus communis]
Length = 1009
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 294/691 (42%), Positives = 417/691 (60%), Gaps = 61/691 (8%)
Query: 116 SDSDNKGRNAIERIVLRLRNLGLGSDDEE-------EGEEEEDDINGAATGE---ERLED 165
S+S +AI+RI +LR+LG + E E ++ E +I E R+
Sbjct: 46 SNSKTVPSSAIQRIADKLRSLGFAEHNPEPHTRNSAETKQREGEIFIPLPNELSKYRVGH 105
Query: 166 LLRREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAEL 224
L W P N V R G +++L + ++ K E ++R K PTLAEL
Sbjct: 106 TLDPSWSTPENPVPRPGSG---NAILRYHELRKQ------VKKEREDKKREAKVPTLAEL 156
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
++ +EELRRLRR G+ + ++ V KAG+T+ ++ IH++WR+ E+V++ ++ +MK
Sbjct: 157 SLSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKR 216
Query: 285 AHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP-------------------------SSK 319
H+++ER+TGGLV+WRAGS +V+YRG NY P S K
Sbjct: 217 THDLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKHNDSDK 276
Query: 320 PQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGP 379
+ D + S T+ + ++ + +P R+ + E +SLL+ LGP
Sbjct: 277 IKSCSSSVDGVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEGLGP 336
Query: 380 RFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFA 439
RF +WWG LPVDADLLP V GY+ PFRLLP G++ LTN EMT L+RL R LPCHF
Sbjct: 337 RFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPCHFV 396
Query: 440 LGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYI 499
LGRNR QGLA +I+KLWEK +AKIAVKRG+QNTN+++MAEELK LTGGTLL R++ +I
Sbjct: 397 LGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDREFI 456
Query: 500 VLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETE----GQAPAGTL 555
VLYRGKDFLP V+SA+ ER + +V ++ + A + E E G + +G+
Sbjct: 457 VLYRGKDFLPSAVSSAIKERRN---HVFNVAKERTDNSTSAETAKEAEDVEDGTSNSGSQ 513
Query: 556 AEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIE 615
EF+ ++S + + +EA +KR +L+++ KK +A +LLA+IE
Sbjct: 514 DEFH-GNNEQSYDLSKQRKLSFTKEA--------IKRTSIRLSMALEKKAKAVKLLAEIE 564
Query: 616 ASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVK 675
S + P+ D+E ITDEER M R+VGL+MK FL +G RGVFDG +ENMHLHWKYRELVK
Sbjct: 565 NSEMSQQPEIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVK 624
Query: 676 LITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTK 735
+I K+++L V + A+ LE ESGGIL+A+ERV KG+A++ YRGKNY+RP LRP LL+K
Sbjct: 625 IICKERSLNAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSK 684
Query: 736 AKALKRSVAMQRHEALSQHISDLENTIEQMK 766
+A+KRS+ QR E+L H+ L I +K
Sbjct: 685 REAMKRSLEAQRRESLKLHVLRLTRNINDLK 715
>gi|115478793|ref|NP_001062990.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|48716728|dbj|BAD23409.1| putative CRS1 [Oryza sativa Japonica Group]
gi|50726191|dbj|BAD33710.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113631223|dbj|BAF24904.1| Os09g0363100 [Oryza sativa Japonica Group]
gi|125591023|gb|EAZ31373.1| hypothetical protein OsJ_15500 [Oryza sativa Japonica Group]
Length = 947
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 282/599 (47%), Positives = 378/599 (63%), Gaps = 42/599 (7%)
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRRLRRNGMYLRERINV 247
LLPWERE G+ R R ++ T LAE TI + ELRRLR + ++ER+ V
Sbjct: 316 LLPWERE-------------GDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRV 362
Query: 248 PKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVV 307
G+TQ ++ IH KWR +E+V+L+F + +MK H+I+E RTGG+VIWR+G +V+
Sbjct: 363 GPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVL 422
Query: 308 YRGNNYA--GPSSKPQPLDGDGDT---------LFVPHV---SSTDG-STARSVDEKSEV 352
YRG NY S Q + + D + V H S DG + + + SE
Sbjct: 423 YRGMNYNLRCVQSYTQTTEVNFDKRVSSNSVEPIHVEHKFQKSGADGLNRSAYIVNSSEK 482
Query: 353 PVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLP 412
P D +S LD LGPR+++W G G +PVDADLLP V GYKTPFRLLP
Sbjct: 483 PTETFD-----------IDSFLDQLGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLP 531
Query: 413 TGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQ 472
++S L N EMT LRRLAR HFALGRNR HQGLA AI+KLWEKS +AKIA+KRG+
Sbjct: 532 YMVKSTLRNKEMTALRRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVP 591
Query: 473 NTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEK 532
NT N MAEE++ LTGG LL RNK YIV YRG DF+ P V L E+++ A QD EE
Sbjct: 592 NTCNDRMAEEIRKLTGGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEEL 651
Query: 533 VRSKTLEATPSGETEGQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLV 590
R K + + P AGTLAE EA+ RWG ++AE R+K KH L+
Sbjct: 652 ARLKASASISVKPKVFKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLL 711
Query: 591 KRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLP 650
+ ++ KL +++ K ++AE+ LAK++ + P+ D ET+TDEER + RR+GL+MKAFL
Sbjct: 712 RNLKRKLILAKTKVIKAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLM 771
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG R VFDG V+NMHLHWK+RELVK++ K K+ V+ A LE ESGG+LI++++ KG
Sbjct: 772 LGRREVFDGTVQNMHLHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKG 831
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+A+I YRGKNY+ P L+PRNLL++ KAL RS+ +QR E L+ HIS+L + I ++K ++
Sbjct: 832 YAIILYRGKNYKTPQILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQL 890
>gi|356564786|ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 794
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/582 (48%), Positives = 370/582 (63%), Gaps = 20/582 (3%)
Query: 204 GEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDK 263
E+ GE ++RR LAE TI + ELRRLR+ + + ER +V G+TQ+++ +H K
Sbjct: 180 AERVNGERKKRRSNT-ELAERTIPEHELRRLRKIALRMMERFDVGVKGITQELVASVHQK 238
Query: 264 WRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPS------ 317
WR E+V+ KF L+ MK AH+I+E + GG+VIWR+GS +V+YRG Y P
Sbjct: 239 WRDAEVVKFKFGIPLSAHMKKAHQILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKK 298
Query: 318 ---SKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEE----AEC 370
+K +D +L V + S S +V V ++ K M+EEE +
Sbjct: 299 VNLAKENAVD---HSLHVGNGSDGQASVNETVGTAESVIQESAEYLKDMSEEELMEMCDL 355
Query: 371 NSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRL 430
N LLD LGPRF++W G LPVDADLLP V GYKTPFRLLP +R LTN EMT+ RRL
Sbjct: 356 NHLLDELGPRFKDWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRL 415
Query: 431 ARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGT 490
AR+ HFALGRNR QGLA A++KLWE S +AKIA+KRG+ NT N MAEEL+ LTGGT
Sbjct: 416 ARTTAPHFALGRNRELQGLARAMVKLWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGT 475
Query: 491 LLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQA 550
LL RNK YIV YRG DFLPP V + L ER++ QD E+K R T S Q
Sbjct: 476 LLSRNKEYIVFYRGNDFLPPVVTNTLNERQKLTLLQQDEEDKARQIASSITVSNSKAAQV 535
Query: 551 P--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
P AGTL E A WG + S +E E M+ +++ K + LVK E KLA++++K +AE
Sbjct: 536 PLIAGTLTETRAATTNWGHQPSKQEIENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAE 595
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+ LAK++ + P+ D ET+T+EER +FR++GL MK +L LG R V+ G +ENMHLHW
Sbjct: 596 KALAKVQRDLDPADIPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHW 655
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG-FALIFYRGKNYRRPISL 727
KYRELVKLI K + A V+ + LE ESGG+L+++++ +G +I YRGKNY P +
Sbjct: 656 KYRELVKLIVKGRNSAQVKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVV 715
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
RP+NLLT+ +AL RSV +QR EAL HISDLE I +K E+
Sbjct: 716 RPKNLLTRRQALARSVELQRREALKHHISDLEERIGLLKSEL 757
>gi|334186525|ref|NP_193187.3| CRM family member 3B [Arabidopsis thaliana]
gi|332658053|gb|AEE83453.1| CRM family member 3B [Arabidopsis thaliana]
Length = 907
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 295/691 (42%), Positives = 417/691 (60%), Gaps = 58/691 (8%)
Query: 126 IERIVLRLRNLGLGSDDE-EEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGE 184
+E+IV +L+ G +D+ ++ E E++ ++ EER RR + V G
Sbjct: 125 MEKIVEKLKKYGFVDEDQFQDKEVEQERRIEKSSVEERFYVEERRGGFSEESPF-GVYGG 183
Query: 185 EDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
D+ PWE+ + E GE ++ +LAE+T+ + EL RLR + +
Sbjct: 184 NDEVKFPWEKVSSMEKK---ELVNGEWTAKKESRYSLAEMTLSEFELNRLRNVMFRTKSK 240
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
+ V AG+TQ V+ I +KW+ E+VRLK A +M+ HEI+ER+TGGLVIWR+G+
Sbjct: 241 MRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTS 300
Query: 305 MVVYRGNNYAGPSSKPQPLDGDGDT----------LFVPHVSSTDGSTARSVD----EKS 350
+ +Y NY G S++ DG G+ L +ST + + V+ EK
Sbjct: 301 IALY---NYKGGSNR----DGSGNMNKQVYRRAERLPSSLPTSTVDQSVQLVNLPQLEKE 353
Query: 351 EVPVRILDHSKPM-TEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFR 409
V D + P E E E N LL+ LGPR+ +W G LPVDADLLP V GY+ PFR
Sbjct: 354 PTVVGNKDRTSPQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFR 413
Query: 410 LLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKR 469
LP G+RS L E T LRR+A LP HFALGR+R QGLA A++KLW+KSL+AK+A+KR
Sbjct: 414 ALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKR 473
Query: 470 GIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDV 529
G+Q T ++ MAE++K LTGG LL RNK ++V YRGK FL V AL E+E + +QD
Sbjct: 474 GVQLTTSERMAEDIKRLTGGMLLSRNKDFLVFYRGKSFLSLEVGEALMEKEMLVRTLQDE 533
Query: 530 EEKVR------------------SKTLE-----ATPSG-------ETEGQAPAGTLAEFY 559
EE+ R ++TL+ A PS + AGTL E
Sbjct: 534 EEQARLRASSALVVPSIKANQQLARTLQDKEEQARPSALVLPSTKANQNLVSAGTLGETL 593
Query: 560 EAQKRWGREVSAEER-EKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASM 618
+A +WG+ + ++ E+M +E K + A+LV+++E KLA ++ K L+AER LAK+E S+
Sbjct: 594 DATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKLERKLAFAEKKLLKAERALAKVEESL 653
Query: 619 VPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLIT 678
P+ D E IT+EER MF+++GL+MKAFL LG RGVFDG VENMHLHWKYREL+K++
Sbjct: 654 KPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILV 713
Query: 679 KQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKA 738
K KTL + A LE ESGGIL++++++ KG+A+I YRGK+Y+RP +LRP+NLLTK KA
Sbjct: 714 KAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKA 773
Query: 739 LKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
L RS+ +Q+ EAL +HI ++ EQ++ EI
Sbjct: 774 LARSLELQKREALIKHIEAIQTRSEQLRAEI 804
>gi|357496109|ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355493358|gb|AES74561.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 1096
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/583 (45%), Positives = 366/583 (62%), Gaps = 50/583 (8%)
Query: 218 APTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEV 277
PTLAEL++ D E+ RLR G ++++I V KAG+T+ ++ IH++WR+ E+VR+ ++
Sbjct: 143 VPTLAELSLTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDL 202
Query: 278 LATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP------------SSKPQPLDG 325
+MK H+I+ER+TGGLV+WR+GS +++YRG +Y P S QP+D
Sbjct: 203 CRINMKRTHDILERKTGGLVVWRSGSKIILYRGIDYKYPYFLSDEVLREEESDALQPMDS 262
Query: 326 DGDTLFVPHVSSTDGSTARSVDEKSEV-------------PVRILDHSKPMTEEEAECNS 372
D +++ S++ S+A + S + P R+ E E +S
Sbjct: 263 DDESIDERKTHSSEMSSATHAGQSSNIKTVKPALVQGVGTPNRVRFQLPGEAELLEEVDS 322
Query: 373 LLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLAR 432
LL+ LGPRF +WWG +PVDADLLP + G++ PFRLLP G++S+LT+ EMT L+RL R
Sbjct: 323 LLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRPPFRLLPYGVQSKLTDDEMTTLKRLGR 382
Query: 433 SLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLL 492
+LPCHFALGRN QG+A AI+K WE+ + IAVKRG+QNT+N+ MAEE+K LTGGTLL
Sbjct: 383 TLPCHFALGRNWKLQGVAAAIIKFWERCEIVNIAVKRGVQNTSNRKMAEEIKYLTGGTLL 442
Query: 493 QRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPA 552
RNK IV+YRGKDFLP V+SA+ +R + K ++ E + +
Sbjct: 443 SRNKEVIVIYRGKDFLPAAVSSAIKKRWKAVKNKENAENR-------------------S 483
Query: 553 GTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLA 612
A + +K E EK + +KA ++R KLA + KK +AE+LL
Sbjct: 484 AITASSHSERKHMTFIKDKETIEKPLLMKAKAA----IQRTSFKLAQALEKKEKAEKLLE 539
Query: 613 KIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRE 672
+E + D+E+IT+EER M RR+GL+MK FL LG RGVFDG VENMHLHWKYRE
Sbjct: 540 SLEKDESLQEEEIDKESITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHLHWKYRE 599
Query: 673 LVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNL 732
LVK+I Q+++ Y TAR LE ESGGIL+A+ERV KG+A+I YRGKNY RP SLRPR L
Sbjct: 600 LVKIICNQESVEYAHQTARTLEAESGGILVAVERVNKGYAIIVYRGKNYSRPDSLRPRTL 659
Query: 733 LTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDE 775
L K +ALKRS+ QR EAL H+ L+ I ++K ++ KDE
Sbjct: 660 LNKKQALKRSIEAQRREALKLHVLKLDKNINELKHQM--VKDE 700
>gi|125549065|gb|EAY94887.1| hypothetical protein OsI_16687 [Oryza sativa Indica Group]
Length = 893
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/584 (46%), Positives = 361/584 (61%), Gaps = 66/584 (11%)
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPT-LAELTIEDEELRRLRRNGMYLRERINV 247
LLPWERE G+ R R ++ T LAE TI + ELRRLR + ++ER+ V
Sbjct: 315 LLPWERE-------------GDVDRPRKRSNTELAERTIPEHELRRLRDVALRMKERMRV 361
Query: 248 PKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVV 307
G+TQ ++ IH KWR +E+V+L+F + +MK H+I+E RTGG+VIWR+G +V+
Sbjct: 362 GPGGVTQLIVESIHQKWRVEEVVKLRFEGPPSLNMKRTHDILEERTGGIVIWRSGRSVVL 421
Query: 308 YRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEE 367
YRG NY +R + TE
Sbjct: 422 YRGMNYN---------------------------------------LRCVQSYTQTTE-- 440
Query: 368 AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDL 427
LGPR+++W G G +PVDADLLP V GYKTPFRLLP ++S L N EMT L
Sbjct: 441 ---------LGPRYKDWSGRGPIPVDADLLPGVVPGYKTPFRLLPYMVKSTLRNKEMTAL 491
Query: 428 RRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLT 487
RRLAR HFALGRNR HQGLA AI+KLWEKS +AKIA+KRG+ NT N MAEE++ LT
Sbjct: 492 RRLARQTAPHFALGRNREHQGLATAIVKLWEKSSIAKIAIKRGVPNTCNDRMAEEIRKLT 551
Query: 488 GGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETE 547
GG LL RNK YIV YRG DF+ P V L E+++ A QD EE R K +
Sbjct: 552 GGVLLSRNKEYIVFYRGNDFITPKVRQVLVEKQEQAITWQDEEELARLKASASISVKPKV 611
Query: 548 GQAP--AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
+ P AGTLAE EA+ RWG ++AE R+K KH L++ ++ KL +++ K +
Sbjct: 612 FKNPPVAGTLAETREAKSRWGDSINAELRKKEKNHMILTKHTSLLRNLKRKLILAKTKVI 671
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
+AE+ LAK++ + P+ D ET+TDEER + RR+GL+MKAFL LG R VFDG V+NMH
Sbjct: 672 KAEKALAKVQEFLSPAELPTDLETVTDEERFLLRRIGLKMKAFLMLGRREVFDGTVQNMH 731
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWK+RELVK++ K K+ V+ A LE ESGG+LI++++ KG+A+I YRGKNY+ P
Sbjct: 732 LHWKHRELVKVLVKGKSFPQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYKTPQ 791
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
L+PRNLL++ KAL RS+ +QR E L+ HIS+L + I ++K ++
Sbjct: 792 ILKPRNLLSRRKALARSIELQRREGLNHHISNLRDKIWKLKSQL 835
>gi|222616258|gb|EEE52390.1| hypothetical protein OsJ_34482 [Oryza sativa Japonica Group]
Length = 560
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 275/568 (48%), Positives = 369/568 (64%), Gaps = 35/568 (6%)
Query: 207 PAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRK 266
P R R KA +AELT+ + ELRRLR GM L+ RI V AG+T++++ +I D+WR
Sbjct: 4 PEAGPRAARSKA-WMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERIRDRWRN 62
Query: 267 DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY------AGPSSKP 320
DE+VR+K A +M+ HEI+ER+TGGLVIWR+G+ + +YRG Y G S
Sbjct: 63 DEVVRIKVTGTPALNMRLFHEILERKTGGLVIWRSGTSVSLYRGVAYDIPEPTKGTSKNT 122
Query: 321 QPL-------DGDGDTLF----VPHVSSTDGSTARSVDEKSEV-PVRILDHSKPMTEEEA 368
Q L + G +L V + +G+ + ++ + V PV P + E
Sbjct: 123 QTLGMKSSIKEPPGHSLLPNEKVNEMQDNNGALVSNAEKDTLVEPV-------PEIKYED 175
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPR+ +W PVDADLLP V GYK PFR+LP G+R L+ + T+LR
Sbjct: 176 EIDKLLDELGPRYDDWPRPDPSPVDADLLPATVPGYKPPFRVLPYGVRPSLSRRDTTNLR 235
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLAR LP HFALGR+R QGLA A++KLWEKS +AKIA+KRG+Q T ++ MAE++K LTG
Sbjct: 236 RLARGLPPHFALGRSRQLQGLAAAMVKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTG 295
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
G +L RN ++V YRGKDFL P +A L ERE+ AK +QD EE+ R L A S +
Sbjct: 296 GVMLSRNNDFMVFYRGKDFLSPELAEKLLERERWAKSLQD-EEQAR---LNAASSFSSRT 351
Query: 549 QAP-----AGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAK 603
+AP AGTL E EA ++G ++ KM A+HA LV+++E KL ++Q K
Sbjct: 352 EAPVEPTVAGTLGETLEANSKYGNKLDENYENKMTRTVEAARHADLVRKLEWKLQLAQKK 411
Query: 604 KLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVEN 663
+AER+L K+E ++ P+ ETITDEER MFR++GLRMKAFL LG RGVFDG +EN
Sbjct: 412 IEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIEN 471
Query: 664 MHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRR 723
MHLHWKYRELVK++ K K+ V+ A LE ESGGIL+++++V KG+A++ +RGK+Y R
Sbjct: 472 MHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYAR 531
Query: 724 PISLRPRNLLTKAKALKRSVAMQRHEAL 751
P LRPRNLL+K KAL RS+ +QR E L
Sbjct: 532 PSKLRPRNLLSKRKALARSIEIQRREVL 559
>gi|449459492|ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 1032
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/586 (47%), Positives = 375/586 (63%), Gaps = 50/586 (8%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVR 271
++R +AP+LAEL++ +EEL RLR G+ L++++NV KAG+T+ ++ IH+ WR+ E+V+
Sbjct: 150 KKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVK 209
Query: 272 LKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLF 331
+ ++ +MK H+++ER+TGG+V+WR+GS +++YRG NY P + L+ +G
Sbjct: 210 IACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDA 269
Query: 332 VPHVSSTDG------STARSV-DEKSEVPVRILDHSKPM------------------TEE 366
+P S DG ST + DE+S P + P E
Sbjct: 270 LPASHSDDGGNSETESTLSCINDERSAGPTSSVKMPSPTLIQGVGAPNRVRFQLPGEAEL 329
Query: 367 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTD 426
+ SLL+ LGPRF +WWG LPVDADLLP V GY+ PFRLLP G++ +LTN EMT
Sbjct: 330 AEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTS 389
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
LRRLAR LPCHFALGRNR QGLA +I++LWEK +AKIAVKRG+QNTNNKLMAEEL+ L
Sbjct: 390 LRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLL 449
Query: 487 TGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC----AKQIQDVEEKV-RSKTLEAT 541
TGGTLL R++ +IVLYRGKDFLP V+SA+ ++ KQ + + LE
Sbjct: 450 TGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEIN 509
Query: 542 PSGET-EGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVS 600
+G T E Q+ G W + VS E R+ M E S +++ KL+++
Sbjct: 510 ENGPTNESQSITG-----------WKKIVS-ERRKLMSSETS-------MRKTSIKLSIA 550
Query: 601 QAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
KK +AE LAK+E P+ D+E IT EER M ++VGLRMK FL LG RGVFDG
Sbjct: 551 LEKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGT 610
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
VENMHLHWKYRELVK+IT +++ V D AR LE ESGGIL+A+ERV + FA+I +RGKN
Sbjct: 611 VENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKN 670
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
Y+RP LRP +LL K +ALKRS+ QR ++L H+ L +E++K
Sbjct: 671 YKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEELK 716
>gi|334187011|ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/620 (44%), Positives = 382/620 (61%), Gaps = 32/620 (5%)
Query: 222 AELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATD 281
AE + + EL+RLR + + ER+ V AG+TQ ++ IH+KW DE+V+LKF E + +
Sbjct: 240 AERIVPEHELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEVDEVVKLKFSEPYSLN 299
Query: 282 MKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGS 341
MK HE++E++TGGLVIWR+GS +V+YRG +Y Q + P + +
Sbjct: 300 MKRTHEVLEKKTGGLVIWRSGSSVVLYRGISYKLKCV--QTFIKQNNLEANPEIHRS--V 355
Query: 342 TARS-VDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPK 400
AR V E P + K E E N LLD +GPRF +W G PVDADLLP
Sbjct: 356 EARDYVQEDGNYPKNV---PKEQLSELCELNDLLDEVGPRFHDWTGCAPFPVDADLLPGY 412
Query: 401 VDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKS 460
V+GY+ PFR+LP G++ L+N EMT++RRLAR+ P HFALGR+R QGLA A++KLW KS
Sbjct: 413 VEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKS 472
Query: 461 LVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAERE 520
+AKIA+KRG++NT N+ MAEELK LT G L+ RNK YIV YRG DF+PP VA AL ER+
Sbjct: 473 AIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEYIVFYRGNDFMPPAVAEALTERQ 532
Query: 521 QCAKQIQDVEEKVRSKTLEATPSGETEGQAP-----AGTLAEFYEAQKRWGREVSAEERE 575
+ ++ +E + + ++ ++P AGTLAE A RW S+ + E
Sbjct: 533 KEITEVLQAKEDQAREMASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNASSVDIE 592
Query: 576 KMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEER 635
++ E++ K A L++ +E +L + K RAER LAK++ + PS D E IT+EER
Sbjct: 593 ELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQKDLDPSELPTDSEIITEEER 652
Query: 636 AMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEY 695
++R++GL M FL LG R V+DG +ENMHLHWK+RELVK+I + K+L V+ A LE
Sbjct: 653 LLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEA 712
Query: 696 ESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHI 755
ESGG+L+++++ KG+A+I YRGKNY+ P LRP NLLT+ KA RS+ +QR EAL H+
Sbjct: 713 ESGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHV 772
Query: 756 SDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDY--VSDEDFDSEA 813
+DLE IE +K + ++D R D + E++ Y V + DF S+
Sbjct: 773 ADLEERIELLK-----TGQDDDMETRNKSD-----------EEEENLYLRVDESDFSSDE 816
Query: 814 DEDSELSSFESDDNDLSKNG 833
DE E S E ++ LS G
Sbjct: 817 DESLEWES-EKNETFLSSEG 835
>gi|224059986|ref|XP_002300024.1| predicted protein [Populus trichocarpa]
gi|222847282|gb|EEE84829.1| predicted protein [Populus trichocarpa]
Length = 1012
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 291/699 (41%), Positives = 414/699 (59%), Gaps = 71/699 (10%)
Query: 114 RYSDSDNKG---RNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATG---EERLEDLL 167
R S +DN +AI+RI +LR+LG + E + + +I + R+ L
Sbjct: 52 RSSSADNPQTLPHSAIQRIADKLRSLGFTEETETKAQTTAGEIFVPLPNRLPKYRVGQTL 111
Query: 168 RREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTI 226
W P N V G+ RE K E ++ K P+LAEL++
Sbjct: 112 DPSWSTPENPVPVPGSGKAISRYHELRREV---------KREREAKKGEAKVPSLAELSL 162
Query: 227 EDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAH 286
+EELRRLR G+ + ++ V KAG+T+ ++ IH++WR+ E+V++ ++ +MK H
Sbjct: 163 PNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTH 222
Query: 287 EIVERRTGGLVIWRAGSVMVVYRGNNYAGP----------SSKP----------QPLDGD 326
+++ER+TGGLV+WR GS +V+YRG +Y P + P + +D +
Sbjct: 223 DLLERKTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSPDAVQNIDVDDKEVDEE 282
Query: 327 GDTLFV------PHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPR 380
G L P S+D S+ + P R+ + E + LLD LGPR
Sbjct: 283 GSVLSAVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEADQLLDGLGPR 342
Query: 381 FQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFAL 440
F +WWG LPVDADLLP V GY+ PFRLLP G+ LTN EMT L+RL R LPCHFAL
Sbjct: 343 FNDWWGYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRLGRPLPCHFAL 402
Query: 441 GRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIV 500
GRN HQGLA +I+KLWEK +AKIAVKRG+QNTN++LMA+ELK LTGGTLL R++ +IV
Sbjct: 403 GRNTKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGTLLSRDREFIV 462
Query: 501 LYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYE 560
LYRGKDFLP V+SA+ +R ++ D+++ + + S ET E
Sbjct: 463 LYRGKDFLPSAVSSAIEDR----RKRGDMDK----RWTDCITSNETSE-----------E 503
Query: 561 AQKRWGREVSAEEREKM------VEEASKAKHAR----LVKRIEHKLAVSQAKKLRAERL 610
+ R R +A+ R+++ + S+ K+ R +KR KL+++ KK +AE+L
Sbjct: 504 LKDRSWRTTNAKSRDEIDDTNDRKHDLSENKNLRSTDAAIKRTSIKLSMALEKKAKAEKL 563
Query: 611 LAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKY 670
L+++E S + P+ D+E IT+EER M R++GL+MK FL +G RGVFDG +ENMHLHWKY
Sbjct: 564 LSELEKSEMSQQPEKDKEGITEEERYMLRKIGLKMKPFLLMGERGVFDGTIENMHLHWKY 623
Query: 671 RELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPR 730
RELVK+I K+K+ V+ AR LE ESGGIL+A+E V KG+A+I YRGKNY RP LRP
Sbjct: 624 RELVKIICKEKSFQAVQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPP 683
Query: 731 NLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
LL+K +A+KRS+ QR E+L H+ L + I+ +K ++
Sbjct: 684 TLLSKRQAMKRSLEAQRRESLKLHVLRLTSNIDHLKLQL 722
>gi|449515235|ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 1053
Score = 487 bits (1254), Expect = e-134, Method: Compositional matrix adjust.
Identities = 278/587 (47%), Positives = 374/587 (63%), Gaps = 51/587 (8%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVR 271
++R +AP+LAEL++ +EEL RLR G+ L++++NV KAG+T+ ++ IH+ WR+ E+V+
Sbjct: 170 KKREERAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEFWRRSEVVK 229
Query: 272 LKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLF 331
+ ++ +MK H+++ER+TGG+V+WR+GS +++YRG NY P + L+ +G
Sbjct: 230 IACEDLCRLNMKRTHDLLERKTGGIVVWRSGSKIILYRGPNYIYPYFSHEILEDEGSQDA 289
Query: 332 VPHVSSTDG------STARSV-DEKSEVPVRILDHSKPM------------------TEE 366
+P S DG ST + DE+S P + P E
Sbjct: 290 LPASHSDDGGNSETESTLSCINDERSAGPTSYVKMPSPTLIQGVGAPNRVRFQLPGEAEL 349
Query: 367 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTD 426
+ SLL+ LGPRF +WWG LPVDADLLP V GY+ PFRLLP G++ +LTN EMT
Sbjct: 350 AEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLLPYGVKPKLTNDEMTS 409
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
LRRLAR LPCHFALGRNR QGLA +I++LWEK +AKIAVKRG+QNTNNKLMAEEL+ L
Sbjct: 410 LRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGVQNTNNKLMAEELQLL 469
Query: 487 TGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC----AKQIQDVEEKV-RSKTLEAT 541
TGGTLL R++ +IVLYRGKDFLP V+SA+ ++ KQ + + LE
Sbjct: 470 TGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMKQTDNSPATTGQGLKLEIN 529
Query: 542 PSGET-EGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLA-V 599
+G T E Q+ G W + VS E R+ M E S +++ KL+ V
Sbjct: 530 ENGPTNESQSITG-----------WKKIVS-ERRKLMSSETS-------MRKTSIKLSIV 570
Query: 600 SQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDG 659
KK +AE LAK+E P+ D+E IT EER M ++VGLRMK FL LG RGVFDG
Sbjct: 571 CIRKKAKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDG 630
Query: 660 VVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGK 719
VENMHLHWKYRELVK+IT +++ V D AR LE ESGGIL+A+ERV + FA+I +RGK
Sbjct: 631 TVENMHLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGK 690
Query: 720 NYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
NY+RP LRP +LL K +ALKRS+ QR ++L H+ L +E++K
Sbjct: 691 NYKRPSRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEELK 737
>gi|297800788|ref|XP_002868278.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
gi|297314114|gb|EFH44537.1| hypothetical protein ARALYDRAFT_330061 [Arabidopsis lyrata subsp.
lyrata]
Length = 919
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 299/727 (41%), Positives = 427/727 (58%), Gaps = 81/727 (11%)
Query: 108 SPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLL 167
S ++ R SD G + +E+IV +L+ G DD+ + +E E E R+E+
Sbjct: 99 SGENSSRSSDVGGGG-STMEKIVEKLKKYGFVDDDQFQDKEVEQ--------ERRIEE-- 147
Query: 168 RREWVRPNTVLREVEG---EE--------DDSLLPWEREEEENLRAGGEKPAGETRRRRM 216
V ++E G EE ++ PWE+ + E GE ++
Sbjct: 148 --RAVEDRFYVKEGRGGFSEESPFGVFGGNEVKFPWEKVSSMEKK---ELVNGEWTAKKE 202
Query: 217 KAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
+LAE T+ + EL RLR + ++ V AG+TQ V+ I +KW+ E+VRLK
Sbjct: 203 SRYSLAERTLSESELNRLRNVMFRTKSKMRVTGAGVTQAVVDAIQEKWKSSEIVRLKIEG 262
Query: 277 VLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR---GNNYAGPSSKPQPLDGDGDTL--F 331
A +M+ HEI+ER+TGGLVIWR+G+ + +Y GNN G + + + +TL
Sbjct: 263 ASALNMRRMHEILERKTGGLVIWRSGTSIALYNYKGGNNRDGSGNMNKQIYRRAETLQSS 322
Query: 332 VPHVSSTDGSTARSVD----EKSEVPVRILDHSKPM-TEEEAECNSLLDSLGPRFQEWWG 386
+P +ST + + V EK V D + P E E E N LL+ LGPR+ +W G
Sbjct: 323 LPTNTSTVDQSVQLVHLPQLEKEPTVVGNKDRTSPHEVEYEDEINELLEGLGPRYTDWQG 382
Query: 387 TGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNH 446
LPVDADLLP V Y+ PFR+LP G+RS L E T LRR+A LP HFALGR+R
Sbjct: 383 GYPLPVDADLLPGIVPVYEPPFRVLPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQL 442
Query: 447 QGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKS-------------LTGGTLLQ 493
QGLA A++KLW+KSL+AK+A+KRG+Q T ++ MAE++K LTGG LL
Sbjct: 443 QGLATAMVKLWQKSLIAKVALKRGVQLTTSERMAEDIKVIRIHIRVTFDCLILTGGMLLS 502
Query: 494 RNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR------------------S 535
RNK ++V YRGK FL P VA AL E+E+ + +QD EE+ R +
Sbjct: 503 RNKDFLVFYRGKSFLSPEVAEALMEKERLVRTLQDEEEQARLRASSALVVPSIKANQNLA 562
Query: 536 KTLE-----------ATPSGET-EGQAPAGTLAEFYEAQKRWGREVSAEER-EKMVEEAS 582
+TL+ PS + + AGTL E +A +WG+ + ++ E+M +E
Sbjct: 563 RTLQDEEKQSRPSTLVVPSTKANQNLVSAGTLGETLDATGKWGKSLDNDDHVEEMKQEVE 622
Query: 583 KAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVG 642
+ + A+LV+++E KLA ++ K L+AER LAK+E S+ P+ D E IT+EER MF+++G
Sbjct: 623 RMRSAKLVRKLERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLG 682
Query: 643 LRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILI 702
LRMKAFL LG RGVFDG VENMHLHWKYREL+K++ K K+L + A LE ESGGIL+
Sbjct: 683 LRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKSLEGAKKVAMALEAESGGILV 742
Query: 703 AIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTI 762
+++++ KG+A+I YRGK+Y+RP +LRP+NLLTK KAL RS+ +Q+ EAL +HI ++
Sbjct: 743 SVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIKHIEAVQTRS 802
Query: 763 EQMKKEI 769
EQ++ EI
Sbjct: 803 EQLRAEI 809
>gi|357158137|ref|XP_003578028.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 962
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 273/604 (45%), Positives = 375/604 (62%), Gaps = 22/604 (3%)
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248
LLPWERE+++ R+ LAE TI + ELRRLR + ++ER+ +
Sbjct: 326 LLPWEREDDDAFDG--------VRQGNRSNTELAEKTIPEPELRRLRDAALRMKERMRIG 377
Query: 249 KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
G+TQ +++ IH KW DE+V+++F + +MK HEI+E RTGG VIWR+G +V+Y
Sbjct: 378 PGGVTQAIVKSIHSKWSVDEVVKMRFEGPPSLNMKRTHEILEDRTGGTVIWRSGRSIVLY 437
Query: 309 RGNNY----AGPSSKPQPLDGDGDTLFVPHV--SSTDGSTARSVDEKSEVPVRILDHSKP 362
RG NY +K +D V V S + + +S + I+ S+
Sbjct: 438 RGMNYNLRCVQSYAKIAEVDSSKKVSDVSTVVPSCVEHNLQKSSADGVNRSTSIVSSSQG 497
Query: 363 MTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNA 422
TE + +S LD LGPR+++W G +PVDADLLP V YK PFR LP + L +
Sbjct: 498 ATET-FDIDSFLDQLGPRYKDWSGRSPIPVDADLLPGVVPDYKPPFRQLPYRTKLSLRDK 556
Query: 423 EMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEE 482
EMT LRRLAR HFALGRNR HQGLA AI+KLWEKS + KIA+KRG+ NT N MAEE
Sbjct: 557 EMTALRRLARQTAPHFALGRNREHQGLASAIVKLWEKSTIVKIAIKRGVPNTCNDRMAEE 616
Query: 483 LKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR---SKTLE 539
+K LTGG L+ RNK YI+ YRG DF+ P + L E++Q A QD EE R S ++
Sbjct: 617 IKKLTGGVLISRNKEYIIFYRGNDFMTPKIRQVLVEQQQQAITQQDQEELARLKASASIT 676
Query: 540 ATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAV 599
P+ Q AGTLAE EA+ RWG ++ R+K AKH L+K + KL +
Sbjct: 677 LIPNALKNPQV-AGTLAETREAESRWGDLINDGRRKKERNHLILAKHTSLLKNMTRKLIL 735
Query: 600 SQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDG 659
++ K +AE LAK++ + P+ D ET+TDEER +FRR+GL+MKAFL LG R VF G
Sbjct: 736 AKTKVAKAEMALAKVQEFLSPAELPTDLETVTDEERFLFRRIGLKMKAFLMLGRREVFAG 795
Query: 660 VVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGK 719
V+NMHLHWK+RELVK+I K K+ A V+ A LE ESGG+LI++++ KG+++I YRGK
Sbjct: 796 TVQNMHLHWKHRELVKIIVKGKSFAQVKHIAISLEAESGGVLISLDKTTKGYSIIVYRGK 855
Query: 720 NYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIG---VSKDEE 776
NY+RP L+PRNLLT+ +A+ RS+ +QR EAL+ HIS L I ++K ++ V+ ++
Sbjct: 856 NYKRPQILKPRNLLTRRRAMARSIELQRREALNHHISILRQKIWKLKSQLAQMRVAGGKQ 915
Query: 777 DGNI 780
D ++
Sbjct: 916 DADL 919
>gi|2244807|emb|CAB10230.1| hypothetical protein [Arabidopsis thaliana]
gi|7268157|emb|CAB78493.1| hypothetical protein [Arabidopsis thaliana]
Length = 918
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 295/716 (41%), Positives = 417/716 (58%), Gaps = 83/716 (11%)
Query: 126 IERIVLRLRNLGLGSDDE-EEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGE 184
+E+IV +L+ G +D+ ++ E E++ ++ EER RR + V G
Sbjct: 111 MEKIVEKLKKYGFVDEDQFQDKEVEQERRIEKSSVEERFYVEERRGGFSEESPF-GVYGG 169
Query: 185 EDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
D+ PWE+ + E GE ++ +LAE+T+ + EL RLR + +
Sbjct: 170 NDEVKFPWEKVSSMEKK---ELVNGEWTAKKESRYSLAEMTLSEFELNRLRNVMFRTKSK 226
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
+ V AG+TQ V+ I +KW+ E+VRLK A +M+ HEI+ER+TGGLVIWR+G+
Sbjct: 227 MRVTGAGVTQAVVDAIQEKWKGSEIVRLKIEGSSALNMRRMHEILERKTGGLVIWRSGTS 286
Query: 305 MVVYRGNNYAGPSSKPQPLDGDGDT----------LFVPHVSSTDGSTARSVD----EKS 350
+ +Y NY G S++ DG G+ L +ST + + V+ EK
Sbjct: 287 IALY---NYKGGSNR----DGSGNMNKQVYRRAERLPSSLPTSTVDQSVQLVNLPQLEKE 339
Query: 351 EVPVRILDHSKPM-TEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFR 409
V D + P E E E N LL+ LGPR+ +W G LPVDADLLP V GY+ PFR
Sbjct: 340 PTVVGNKDRTSPQEVEYEDEINELLEGLGPRYTDWQGGYPLPVDADLLPGIVPGYEPPFR 399
Query: 410 LLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKR 469
LP G+RS L E T LRR+A LP HFALGR+R QGLA A++KLW+KSL+AK+A+KR
Sbjct: 400 ALPYGVRSTLGTKEATSLRRIATVLPPHFALGRSRQLQGLATAMVKLWQKSLIAKVALKR 459
Query: 470 GIQNTNNKLMAEELKS-------------------------LTGGTLLQRNKFYIVLYRG 504
G+Q T ++ MAE++K LTGG LL RNK ++V YRG
Sbjct: 460 GVQLTTSERMAEDIKVIRFHSRVTFNCFYINVDIIRINDKRLTGGMLLSRNKDFLVFYRG 519
Query: 505 KDFLPPNVASALAEREQCAKQIQDVEEKVR------------------SKTL-----EAT 541
K FL V AL E+E + +QD EE+ R ++TL +A
Sbjct: 520 KSFLSLEVGEALMEKEMLVRTLQDEEEQARLRASSALVVPSIKANQQLARTLQDKEEQAR 579
Query: 542 PSG-------ETEGQAPAGTLAEFYEAQKRWGREVSAEER-EKMVEEASKAKHARLVKRI 593
PS + AGTL E +A +WG+ + ++ E+M +E K + A+LV+++
Sbjct: 580 PSALVLPSTKANQNLVSAGTLGETLDATGKWGKNLDNDDHVEEMKQEVEKVRSAKLVRKL 639
Query: 594 EHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGI 653
E KLA ++ K L+AER LAK+E S+ P+ D E IT+EER MF+++GL+MKAFL LG
Sbjct: 640 ERKLAFAEKKLLKAERALAKVEESLKPAEQRTDLEGITEEERFMFQKLGLKMKAFLLLGR 699
Query: 654 RGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFAL 713
RGVFDG VENMHLHWKYREL+K++ K KTL + A LE ESGGIL++++++ KG+A+
Sbjct: 700 RGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAV 759
Query: 714 IFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
I YRGK+Y+RP +LRP+NLLTK KAL RS+ +Q+ EAL +HI ++ EQ++ EI
Sbjct: 760 IVYRGKDYKRPTTLRPKNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEI 815
>gi|356573408|ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1027
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/603 (44%), Positives = 379/603 (62%), Gaps = 46/603 (7%)
Query: 213 RRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRL 272
RR K PTLAEL++ D E+RRL G+ +R+++ V KAGLT+ ++ IH++WR E+VR+
Sbjct: 117 RREDKVPTLAELSLSDAEIRRLTTAGLAMRQKLRVGKAGLTEGIVNGIHERWRSFEVVRI 176
Query: 273 KFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP---SSKPQPLDGDGDT 329
++ +MK H+++ER+TGGLV+WR+GS +++YRG +Y P S K D GD
Sbjct: 177 VCEDLSRFNMKRTHDLLERKTGGLVVWRSGSKIILYRGTDYKYPYFLSDKVSRDDNTGDA 236
Query: 330 LFV------------PHVSSTDGST--ARSVDEKSEVPVRILDHSKPM---------TEE 366
+ H S + T +S + K+ P I P E
Sbjct: 237 MQHMDEDAKNFDKRESHSSEKNSVTYAGKSSNVKTAKPALIQGVGSPNKVRFQLPGEAEL 296
Query: 367 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTD 426
+ +SLL +GPRF +WWG LPVDADLLP + GY+ PFRLLP G++ +LT+ EMT
Sbjct: 297 AKDADSLLTGIGPRFIDWWGYDPLPVDADLLPAVIPGYRKPFRLLPYGVKPKLTDDEMTT 356
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
+RRL + LPCHFALGRN+ GLA AI+KLWE+ + KIA+KRG+ NTN +LMAEE+K L
Sbjct: 357 MRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIKRGVLNTNGELMAEEIKYL 416
Query: 487 TGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGET 546
TGGTL+ R+K +IV YRGKDFLP V+SA+ +R + I + K R+ +L T +
Sbjct: 417 TGGTLIARDKEFIVFYRGKDFLPTAVSSAIEQR----RSIGMYKLKTRN-SLSVTDDPDL 471
Query: 547 EGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
+ GT+ E + G + ++ M+ EA A +K KL+++ +K +
Sbjct: 472 KD----GTIECDSEVK---GMNFKKDTKQGMLTEAEAA-----IKSTSIKLSMALEEKAK 519
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AE+LL+++E + P + ++E IT+EE+ M RR+GL+M FL LG RGVFDG VENMHL
Sbjct: 520 AEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVFDGTVENMHL 579
Query: 667 HWKYRELVKLIT-KQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
HWKYRELVK+I KQ +L V+ A+ LE ESGGILIA+ERV K +A+I YRGKNY RP
Sbjct: 580 HWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVYRGKNYSRPA 639
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGD 785
SLRPR LL K +ALKRS+ QR E+L H+ L+ I ++K ++ +KD E + + S D
Sbjct: 640 SLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINELKHQM--AKDMEANSKQTSVD 697
Query: 786 LKQ 788
+Q
Sbjct: 698 NQQ 700
>gi|168024308|ref|XP_001764678.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683972|gb|EDQ70377.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 625
Score = 477 bits (1227), Expect = e-131, Method: Compositional matrix adjust.
Identities = 263/581 (45%), Positives = 369/581 (63%), Gaps = 9/581 (1%)
Query: 191 PWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKA 250
PW++ E + E+ +++R+++P++AELTI D EL+RLR G+ L+ R+ + +
Sbjct: 1 PWDKNTHEEV---NEEEGQVAKKQRVRSPSMAELTIPDFELKRLRTLGLQLQGRLKIGRL 57
Query: 251 GLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRG 310
G+T ++ IH++WR E+ ++K L+ +MK AHE +ER TGGLVIWR+GS VVYRG
Sbjct: 58 GVTPGIVEAIHERWRTCEIAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRSGSAAVVYRG 117
Query: 311 NNYAGPSSKPQPLDGDGDTLFVPHVS-STDGSTARSVDEKSEVPVRILDHSKPMTEEEAE 369
+Y PS + + + + + ++ D +D S V V + K +
Sbjct: 118 KDYVHPSVREREEREERERRKLLSLNLDEDEEREEQIDSTSTVSVEREAYLKKQENDLRM 177
Query: 370 CNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRR 429
+LD LGPR+ +W G +PVD DLL +K PFRLLP G++ +L N E+T+LR
Sbjct: 178 VEEILDGLGPRYADWTGRRPVPVDGDLLLSSDFEFKRPFRLLPYGVKPKLNNFELTELRH 237
Query: 430 LARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGG 489
LAR +P H LG+NR G+A AI+KLWE+S + KI VKRG+QNT+N+ MAEELK LTGG
Sbjct: 238 LARPIPPHIVLGKNRGLDGVAAAIVKLWERSEIVKIGVKRGVQNTSNERMAEELKRLTGG 297
Query: 490 TLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKV----RSKTLEATPSGE 545
TLL R+K +IV +RGKDFLPP V +AL ER+Q AK +Q+ EE+ RS+ ++
Sbjct: 298 TLLSRDKEFIVFHRGKDFLPPAVQAALEERDQMAKALQEEEERFRMGGRSRPVQVVEETR 357
Query: 546 TEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
+G GTL E E + +W + ++E K A K K A+ RI KL ++ K
Sbjct: 358 YQGVYKVGTLEEALETRAKWEAWLDSDEARKERIAARKRKRAQATDRIRSKLNLALKKME 417
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
RA+ L K+EA P+ D+E ++D ER M+R++GL+MKAFL LG RGVF G VENMH
Sbjct: 418 RAQLELNKVEAKTTPANVTLDKEHLSDGERYMYRKLGLKMKAFLLLGRRGVFSGTVENMH 477
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWKYRELVK++ K +L E A++LE ESGGIL+ I KG A++ YRGKNY+RP
Sbjct: 478 LHWKYRELVKILVKT-SLPEAERIAKILENESGGILVDIITTSKGQAIVMYRGKNYQRPS 536
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
LRPR+LLTK +ALKRS+ MQR E+L +HI L+ IE M+
Sbjct: 537 ELRPRHLLTKRQALKRSLEMQRMESLEKHIRVLKKEIETMQ 577
>gi|30678323|ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana]
gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana]
gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana]
gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana]
Length = 1011
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/584 (44%), Positives = 361/584 (61%), Gaps = 43/584 (7%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVR 271
R++ K P+LAELT+ ELRRLR G+ L +++ + KAG+T+ ++ IH++WR E+V+
Sbjct: 152 RKKEEKVPSLAELTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVK 211
Query: 272 LKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLF 331
+ ++ +MK H+++E +TGGLVIWR+GS +++YRG NY P D D
Sbjct: 212 IFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVS---DRDLAHEA 268
Query: 332 VPHVSSTDGSTARSVDEKS----EVPVRILDHSKPMTEEEA------------------E 369
SS D S +++S P KPM + E
Sbjct: 269 ASGASSMDQGVVDSREKQSIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEE 328
Query: 370 CNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRR 429
+ LL+ LGPRF +WW LPVD DLLP V Y+ PFRLLP G+ +LT+ EMT +RR
Sbjct: 329 ADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRR 388
Query: 430 LARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGG 489
L R LPCHFALGRNRN QGLAVAI+KLWEK +AKIAVKRG+QNTN++LMAEELK LTGG
Sbjct: 389 LGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGG 448
Query: 490 TLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQ 549
TL+ R+K +IVLYRGKDFLP V+SA+ ER + +++ ++ E E +
Sbjct: 449 TLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMEN-------SSVHGNKLTENEEE 501
Query: 550 APAGTLAEFYEA----QKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
+ E E QK + + R++ EA ++++ KL+++ KK
Sbjct: 502 IKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEA-------ILEKTSMKLSMALEKKA 554
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
AE++LA +E P D D+E IT++E+ M R++GL+MK FL LG RGVFDG +ENMH
Sbjct: 555 NAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMH 614
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWKYRELVK+I + ++ A +LE ESGGIL+A+E V KG+A+I YRGKNY RP
Sbjct: 615 LHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQ 674
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
LRP+ LL+K +ALKRSV QR ++L H+ L N IE++ +++
Sbjct: 675 CLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQL 718
Score = 40.0 bits (92), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 414 GMRSRLTNAEMTDLRRLARSLPCH--FALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGI 471
G+ + L+N E LR+ A + FA+GR+ GLA + ++K+ +A + VK
Sbjct: 870 GLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRA 929
Query: 472 QNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG-------KDFLPPN 511
T+ + + +LK TG L+ + ++LYRG K F P N
Sbjct: 930 NGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNN 976
>gi|302805129|ref|XP_002984316.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
gi|300148165|gb|EFJ14826.1| hypothetical protein SELMODRAFT_120007 [Selaginella moellendorffii]
Length = 692
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/655 (42%), Positives = 385/655 (58%), Gaps = 62/655 (9%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
PW+RE + E P TR + K P LAELTI + ELRRL+R + + I V
Sbjct: 50 FPWQRE------SSSEAPTPVTRPQPPKLPCLAELTIPELELRRLQRIAIRVVNPIKVGY 103
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
G+T+ V++ IH +W+K E+V+++ A +MK H+ +E +TGGLV+WR G + ++YR
Sbjct: 104 LGVTKAVVQDIHRRWQKCEVVKIQCDGPAAINMKQTHDELETKTGGLVVWRTGGMAILYR 163
Query: 310 GNNYAG---------------------PSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDE 348
G Y + K + D D D S ++ AR E
Sbjct: 164 GKGYFARVDNSMVANLKKYQRRKINLMEAIKIRDEDEDRD------YSQSEHGEARRDSE 217
Query: 349 KSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPF 408
K + LD E ++LL+ LGPR+ +W G +PVD DLLP V GYK P
Sbjct: 218 KGNIEDEYLD----------EIDALLEELGPRYDDWIGRKPVPVDGDLLPASVPGYKPPL 267
Query: 409 RLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVK 468
R+LP + L+N E+T LRRL + LP HF LGRNR QGLA AILKLW+KS + KI +K
Sbjct: 268 RMLPYRAKKNLSNMELTVLRRLVKPLPPHFVLGRNRGLQGLASAILKLWQKSELVKIGLK 327
Query: 469 RGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQD 528
RG+QNT N+LMAEEL+ LTGG LL R+KF+I LYRGKDFLP +VA+ L ERE +++
Sbjct: 328 RGVQNTRNQLMAEELERLTGGVLLSRDKFFITLYRGKDFLPTSVAAVLRERESNMRELLL 387
Query: 529 VEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHAR 588
E++VR G+ +G+L+E E +++W + S ++ E A A R
Sbjct: 388 KEDQVRIPA--QIGDGQNRTTPVSGSLSESMEMRRQWEAQRSEKDDEMDRNAAVVALKVR 445
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
KR+E KLA + +KK RA+ + K+E S++ S D+ETIT+EER MF+++GLRM AF
Sbjct: 446 EQKRLEAKLAAAISKKRRADLQIVKLERSLLLSEHPRDRETITEEERYMFKKLGLRMDAF 505
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
L +G RGVFDGV+ENMHLHWK+RELVKLI K+K A + A++LE ESGGIL+ +
Sbjct: 506 LLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAIALEVAKMLEIESGGILVGVVTTS 565
Query: 709 KGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKE 768
KG A+I YRGKNY+RP LRPR+LLTK KAL RS +QR +AL HI LE I +++K+
Sbjct: 566 KGQAIIVYRGKNYQRPAELRPRSLLTKRKALARSKEIQRKKALQLHIEKLEELIMKLRKD 625
Query: 769 IGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFE 823
++ D K+ H ++D+ SD+ DSE D S E
Sbjct: 626 YLLA------------DRKKLHH-----DDDDEMAYSDDLLDSEISSDGSESEAE 663
>gi|6692258|gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana]
Length = 1020
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/593 (43%), Positives = 361/593 (60%), Gaps = 52/593 (8%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVR 271
R++ K P+LAELT+ ELRRLR G+ L +++ + KAG+T+ ++ IH++WR E+V+
Sbjct: 152 RKKEEKVPSLAELTLPPAELRRLRTVGIRLTKKLKIGKAGITEGIVNGIHERWRTTEVVK 211
Query: 272 LKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLF 331
+ ++ +MK H+++E +TGGLVIWR+GS +++YRG NY P D D
Sbjct: 212 IFCEDISRMNMKRTHDVLETKTGGLVIWRSGSKILLYRGVNYQYPYFVS---DRDLAHEA 268
Query: 332 VPHVSSTDGSTARSVDEKS----EVPVRILDHSKPMTEEEA------------------E 369
SS D S +++S P KPM + E
Sbjct: 269 ASGASSMDQGVVDSREKQSIAESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEE 328
Query: 370 CNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRR 429
+ LL+ LGPRF +WW LPVD DLLP V Y+ PFRLLP G+ +LT+ EMT +RR
Sbjct: 329 ADRLLEGLGPRFTDWWAYDPLPVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRR 388
Query: 430 LARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKS---- 485
L R LPCHFALGRNRN QGLAVAI+KLWEK +AKIAVKRG+QNTN++LMAEELK
Sbjct: 389 LGRPLPCHFALGRNRNLQGLAVAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLL 448
Query: 486 -----LTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEA 540
LTGGTL+ R+K +IVLYRGKDFLP V+SA+ ER + +++ ++
Sbjct: 449 LVIKWLTGGTLISRDKDFIVLYRGKDFLPSAVSSAIEERRRQTMIMEN-------SSVHG 501
Query: 541 TPSGETEGQAPAGTLAEFYEA----QKRWGREVSAEEREKMVEEASKAKHARLVKRIEHK 596
E E + + E E QK + + R++ EA ++++ K
Sbjct: 502 NKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEA-------ILEKTSMK 554
Query: 597 LAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGV 656
L+++ KK AE++LA +E P D D+E IT++E+ M R++GL+MK FL LG RGV
Sbjct: 555 LSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGV 614
Query: 657 FDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFY 716
FDG +ENMHLHWKYRELVK+I + ++ A +LE ESGGIL+A+E V KG+A+I Y
Sbjct: 615 FDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVY 674
Query: 717 RGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
RGKNY RP LRP+ LL+K +ALKRSV QR ++L H+ L N IE++ +++
Sbjct: 675 RGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQL 727
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 414 GMRSRLTNAEMTDLRRLARSLPCH--FALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGI 471
G+ + L+N E LR+ A + FA+GR+ GLA + ++K+ +A + VK
Sbjct: 879 GLVTDLSNRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRA 938
Query: 472 QNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG-------KDFLPPN 511
T+ + + +LK TG L+ + ++LYRG K F P N
Sbjct: 939 NGTSVQEVIAKLKEETGALLVSQEPSKVILYRGWGAEEEMKSFYPNN 985
>gi|356573410|ref|XP_003554854.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 1028
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 288/699 (41%), Positives = 405/699 (57%), Gaps = 66/699 (9%)
Query: 111 SYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGE---ERLEDLL 167
S P + +AIE+I +LR+LG+ E +I+ E R+
Sbjct: 41 STPEIQTRTRRRSSAIEQIAKKLRSLGI----TEPPTSSSSEIHVPFPHELPKRRVGHTF 96
Query: 168 RREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTI 226
W P N V V G +L E ++ LRA E+RRR+ PTLAEL++
Sbjct: 97 EPSWSTPLNPV--PVPGSGIAALSKSEVRRQKKLRAE------ESRRRKELVPTLAELSL 148
Query: 227 EDEELRRLRRNGM-YLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
D E+RRL G ++++ + KAG+T+ ++ IH++W++ E+VR+ E+ DM+
Sbjct: 149 PDSEIRRLTTLGFSTTKKKVRLAKAGITEQIVDVIHERWKRSEVVRVFCEELSRDDMRRT 208
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNYAGP---SSKPQPLDGDGDTLFVPHVSSTDGST 342
H+++ER+TGGLV+WR+G+ +++YRG +Y P S K D + + HV++ D
Sbjct: 209 HDLLERKTGGLVVWRSGTKIILYRGADYKYPYFLSDKVTRQDNTSNDA-LQHVNADDKYC 267
Query: 343 ARS---VDEKSEV-------------PVRILDHSKP-----MTEEEAE----CNSLLDSL 377
+S + EK+ V P IL P +EAE + LL L
Sbjct: 268 DKSESHLSEKNSVACAVENSNAETAKPALILGVGTPNKVRFQLPDEAELAEDTDCLLTGL 327
Query: 378 GPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCH 437
GPRF +WWG LPVDADLLP + GY+ PFRLLP G+ +LT+ EMT L+RL + LPCH
Sbjct: 328 GPRFTDWWGGDPLPVDADLLPAVIHGYRKPFRLLPYGVNPKLTDDEMTTLKRLGKPLPCH 387
Query: 438 FALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKF 497
FALGRNR QGLA AI+KLWE+ + KIAVKRG+QNT++K+MA+ELK LTGG LL R++
Sbjct: 388 FALGRNRKLQGLAAAIIKLWERCEIVKIAVKRGVQNTSSKIMAKELKHLTGGILLSRDRE 447
Query: 498 YIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAE 557
+ V YRGKD+LP V+SA+ ++ + S T+ P GT+
Sbjct: 448 FFVFYRGKDYLPAAVSSAIKKQRNIGMYKLKFGNSL-SATVTPNPKD--------GTIEC 498
Query: 558 FYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEAS 617
E + G + +++M+ +A +A +KR KL+++ KK +AE+LL K+ +
Sbjct: 499 NSEVK---GMNFQKDTKQRMLTKAEEA-----IKRTSIKLSMALEKKAKAEKLLEKLINA 550
Query: 618 MVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLI 677
P + D+E I+ EE+ M RR+GL MK FL LG RGVFDG VENMHLHWKYRELVK+I
Sbjct: 551 ESPQEQEIDKEGISKEEKYMLRRIGLMMKPFLLLGRRGVFDGTVENMHLHWKYRELVKII 610
Query: 678 TKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAK 737
+L V A LE ESGGIL+A+ERV KGFA+I YRGKNY P+ LRP+ LL K +
Sbjct: 611 C-NGSLEEVHQIALTLEAESGGILVAVERVRKGFAIIVYRGKNYSVPVCLRPQTLLNKRQ 669
Query: 738 ALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEE 776
ALKRS+ QR E+L I L+ I ++K +I +DEE
Sbjct: 670 ALKRSIEAQRRESLKLRILTLDKEINELKLQI--VEDEE 706
>gi|168038664|ref|XP_001771820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676951|gb|EDQ63428.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1106
Score = 461 bits (1185), Expect = e-126, Method: Compositional matrix adjust.
Identities = 317/810 (39%), Positives = 445/810 (54%), Gaps = 87/810 (10%)
Query: 32 FSSSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTE 91
+SSSR+ + S +++P+ ++ APW P
Sbjct: 141 LTSSSRRGSEMEGKASHFSTNRSESPKPNTSKYSQHDTEGNMHRAPWDQG-----PARGA 195
Query: 92 NANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEED 151
AN G R+ I + + + Y R ++ RIV +LR +G G E +
Sbjct: 196 KANPRGRRSPIPKNKDARGDRENYQGGGQ--RASMARIVEKLRAIGNG----ESATTMDF 249
Query: 152 DINGAATGE--------ERLEDLLRREWVRPNTVLREVEGEEDD--SLLPW---EREEEE 198
D N AT + + L R W N +E DD S PW E EE+E
Sbjct: 250 DKNPPATETSSFLPRPGQAVHPGLDRRWSNSN-----LEQPSDDLGSRFPWAMGENEEQE 304
Query: 199 NLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMR 258
+ +++R+++P++AELT+ + ELRRLR G+ L+ R+ + + G+T ++
Sbjct: 305 DHEQ-------IEKKKRVRSPSVAELTLPEPELRRLRTLGLQLQGRLKIGRLGVTPGIVE 357
Query: 259 KIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP-- 316
IHD+WR EL ++K L+ +MK AHE +ER TGGLVIWRAGS VVYRG +Y P
Sbjct: 358 AIHDRWRTSELAKVKCDAPLSMNMKKAHEDLERLTGGLVIWRAGSAAVVYRGKDYVHPFV 417
Query: 317 ----SSKPQPLDGDGDT---LFVPHVSSTDGSTARSVDE----------KSEVPVRILDH 359
+ LD D D L + S + + S++E + E ++ +
Sbjct: 418 LEREEKELLSLDLDEDEEQELLMEAGSEVEMES--SIEECFDVTGDQSGEKEFLMKQGQN 475
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
+ M EE LLD LGPR+ +W G +PVD DLL +K PFRLLP G++ +L
Sbjct: 476 ADLMMMEE-----LLDGLGPRYADWKGKDPVPVDGDLLLDSEFKFKRPFRLLPHGVKPKL 530
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
+ EMT LRRLAR +P HF LGRNR GLA AI+KLWEKS + KI VK+G+QNT+N+ M
Sbjct: 531 NDFEMTQLRRLARPVPPHFVLGRNRGLDGLAAAIMKLWEKSEIVKIGVKKGVQNTSNEKM 590
Query: 480 AEELKS--------------LTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQ 525
AEELK+ LTGGTLL R+K YIVL RGKDFLP V AL ER++ AK
Sbjct: 591 AEELKARITSKFPSSRITVRLTGGTLLARDKEYIVLSRGKDFLPSAVRVALEERDRMAKA 650
Query: 526 IQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRW-GREVSAEEREKMVEEASKA 584
+Q+ EE++R + + + GTL E E + W G + S E R++ + A KA
Sbjct: 651 VQEEEERIRLSGRKRVV--QIVDTSKVGTLEEAMETRAAWEGWQKSDEARKERI-AARKA 707
Query: 585 KHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLR 644
K + + RI K+ ++ KK RA LAKI+A P+ D+E +++ ER M+R+ GL+
Sbjct: 708 KRGQAMDRIRQKMKLALQKKERAMAELAKIDAKTNPTDAPLDKEFLSEAERYMYRQQGLK 767
Query: 645 MKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAI 704
K +L LG RGVF G VENMHLHWK+RELVK++ K +A + TA++LE ESGGIL+ I
Sbjct: 768 HKGYLLLGRRGVFGGTVENMHLHWKHRELVKILVK-APIAEAQQTAKMLERESGGILVDI 826
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQ 764
KG A+I YRGKNY+RP LRPR+LLTK +ALKRS+ +QR ++L +HI L IE
Sbjct: 827 VNTSKGQAIIVYRGKNYQRPSELRPRHLLTKRQALKRSLEVQRMQSLEKHIQILMTEIET 886
Query: 765 MKKEIGVSKDEEDGNIR----CSGDLKQFD 790
M + G++K EE + G+L+ FD
Sbjct: 887 M--QAGLNKMEEQDELENEAGTQGNLEDFD 914
>gi|297803062|ref|XP_002869415.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
gi|297315251|gb|EFH45674.1| hypothetical protein ARALYDRAFT_328739 [Arabidopsis lyrata subsp.
lyrata]
Length = 775
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/599 (43%), Positives = 359/599 (59%), Gaps = 59/599 (9%)
Query: 202 AGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIH 261
+G +K +TRR AE + + ELRRLR + + ER+ V AG+TQ +++ IH
Sbjct: 219 SGKDKGIWKTRRSNTAE---AERVVPEHELRRLRSVALRMVERVKVGSAGITQVLVQAIH 275
Query: 262 DKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
+KW DE+V+LKF E + +MK HE++E NN
Sbjct: 276 EKWEVDEVVKLKFGEPFSLNMKRTHEVLE--------------------NN--------- 306
Query: 322 PLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRF 381
L HV + D V E + P + K E E N LLD LGPRF
Sbjct: 307 --------LNTKHVEARD-----YVPEDANYPKNV---PKEQLSELCELNDLLDELGPRF 350
Query: 382 QEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALG 441
+W G PVDADLLP V+GY+ PFR+LP G++ L+N EMT++RRLAR+ P HFALG
Sbjct: 351 HDWTGCAPFPVDADLLPGYVEGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPHFALG 410
Query: 442 RNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVL 501
R+R QGLA A++KLW KS +AKIA+KRG++NT N+ MAEELK LT G L+ RNK YIV
Sbjct: 411 RSRELQGLAKAMVKLWAKSAIAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEYIVF 470
Query: 502 YRGKDFLPPNVASALAERE-QCAKQIQDVEEKVR----SKTLEATPSGETEGQAPAGTLA 556
YRG DF+PP VA AL ER+ + + +Q E++VR ++ + + + Q AGTLA
Sbjct: 471 YRGNDFMPPAVAEALTERQKEITEVLQTKEDQVREMASTRVTLTSQAKSPKTQLLAGTLA 530
Query: 557 EFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEA 616
E A RW + S+ + E++ E++ K A L++ +E +L + K RAER LAK++
Sbjct: 531 ETIAASSRWAPDASSVDIEELKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQK 590
Query: 617 SMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKL 676
+ PS D ETIT+EER ++R++GL M FL LG R V+DG +ENMHLHWK+RELVK+
Sbjct: 591 DLDPSELPTDSETITEEERLLYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKV 650
Query: 677 ITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKA 736
I + K+L V+ A LE ESGG+L+++++ KG+++I YRGKNY+ P LRP NLLT+
Sbjct: 651 IVRGKSLPQVKHIAISLEAESGGVLVSVDKTMKGYSIILYRGKNYQMPFRLRPSNLLTRK 710
Query: 737 KALKRSVAMQRHEALSQHISDLENTIEQMK------KEIGVSKDEEDGNIRCSGDLKQF 789
KA RS+ +QR EAL H++DLE IE +K +E G D E+ N+ D F
Sbjct: 711 KAFARSIELQRREALKYHVADLEERIELLKTGQDDDREPGRKSDGEEENLYLRVDESDF 769
>gi|225452088|ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Vitis vinifera]
Length = 1184
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/617 (44%), Positives = 372/617 (60%), Gaps = 50/617 (8%)
Query: 197 EENLRAGGEKPAGET------RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKA 250
+EN R GG+ P +T R ++ K T AELT++ L RLR + +R+ + V KA
Sbjct: 167 DENSRIGGKMPWLKTEKVVFRRTKKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKA 226
Query: 251 GLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRG 310
G+T+ V+ +IH W+ DEL +KF L +M A EI+E +T GLVIW +VVYRG
Sbjct: 227 GVTESVVDQIHMVWKSDELAMVKFDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRG 286
Query: 311 NNYAGPSSKPQPL------DGDG-----------DTLFVP----HVSSTDGSTARSVDEK 349
+NY S Q + D D L + H S+T R E+
Sbjct: 287 SNYQSTSKHFQKMRPGLVAGADASNSKLNQSNFEDDLTISEIKFHESTTGEKMGRKDGEE 346
Query: 350 SEVPVRI----LDHSKPMTEE--EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDG 403
P I + S+P+ E E + LLD LGPRF +WW LPVDADLLP + G
Sbjct: 347 DSSPTGIFMEEMVDSQPVNGSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPG 406
Query: 404 YKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVA 463
++ PFRL P RS+LT+ E+T LR+LA +LP HF LGRNR QGLA AILKLWEKSL+
Sbjct: 407 FRPPFRLSPPQTRSKLTDDELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIV 466
Query: 464 KIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCA 523
KIA+K GI NT N+ MA ELK LTGG LL RNKF+I+LYRGKDFLP VA+ + ERE
Sbjct: 467 KIAIKWGIPNTKNEQMANELKCLTGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEF 526
Query: 524 KQIQDVEEKVRSKTLEAT-----PSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMV 578
K Q EE R K +E + P T + GTL+EF + + R + E V
Sbjct: 527 KGCQIREEDARLKAIETSFVTDKPLANT---STTGTLSEFQNIETEF-RGLKDGNTEIEV 582
Query: 579 E-EASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 637
E EA K + + +K+ E L + + K R+ ++LAK+ ++ P+ D D+E IT+EER
Sbjct: 583 ELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKLNSAWRPADHDADKEMITEEEREC 642
Query: 638 FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYES 697
FR++G +M + L LG RGVFDGV+E +H HWK+RE+VK+IT Q++ + V TA+LLE ES
Sbjct: 643 FRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESES 702
Query: 698 GGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL------ 751
GG+L++I+++ +G A+I YRGKNYRRPI L P+NLLTK +AL RS+ MQR +L
Sbjct: 703 GGVLVSIDKLKEGHAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQ 762
Query: 752 -SQHISDLENTIEQMKK 767
Q ISDL+ + ++K
Sbjct: 763 RQQAISDLKLKLADLQK 779
>gi|356567264|ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 712
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/604 (44%), Positives = 370/604 (61%), Gaps = 41/604 (6%)
Query: 177 VLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRR 236
+L+E E +PWE++E+ G + +R KA T AELT++ LRRLR
Sbjct: 132 ILKENEEVRSKGRMPWEKDEK----------FGFVKVKREKAVTAAELTLDKALLRRLRN 181
Query: 237 NGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGL 296
+R I V KAG+TQDV+ +I WR++EL +KF L +M A EIVE +TGGL
Sbjct: 182 EAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIKFDIPLCRNMDRAREIVETKTGGL 241
Query: 297 VIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRI 356
V+ +VVYRG N+ + L+ + D H S +V ++
Sbjct: 242 VVLSKKDFLVVYRGCNHHS----SEMLNWNAD-----HKDSISTGI-------QDVNCQL 285
Query: 357 LDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMR 416
++ S + E E E LLD LGPRF +WW LPVDADLLP +V G++ PFRL P
Sbjct: 286 VNGS--LYERETE--RLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSS 341
Query: 417 SRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNN 476
++LT+ E+T R+LA+SLP HF LGRN+ +GLA AILKLWEKSL+AKIA+K GI NT+N
Sbjct: 342 AKLTDYELTYFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDN 401
Query: 477 KLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSK 536
++MA ELK LTGG LL RNKFYI+LYRG DFLP +VAS + +RE K Q EE R K
Sbjct: 402 EMMANELKCLTGGVLLLRNKFYILLYRGNDFLPRSVASLVEKRELELKSRQLHEEVARMK 461
Query: 537 TLEA-TPSGETE-GQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIE 594
++A +P E + +GTL EF + Q + S + EA + + +K +
Sbjct: 462 AIQAFSPIDEVPLDTSTSGTLTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQ 521
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
+ + K R+ER L+K+ A+ PS D D E +TDEER FR++GL+M++ L LG R
Sbjct: 522 RRAFILNKKIKRSERELSKLNAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRR 581
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
G+FDGV+E +H HWK+RE+VK+IT QK + V +TA++LE ESGGIL++++++ +G A+I
Sbjct: 582 GIFDGVLEGLHQHWKHREVVKVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAII 641
Query: 715 FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALS-------QHISDLENTIE--QM 765
YRGKNY+RP +NLLTK +AL+RS+ MQR ++ Q IS+LE + Q
Sbjct: 642 IYRGKNYKRPSIKLAKNLLTKREALRRSLEMQRIGSMKFFAHQREQAISELEVKLADLQQ 701
Query: 766 KKEI 769
KKEI
Sbjct: 702 KKEI 705
>gi|302768979|ref|XP_002967909.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
gi|300164647|gb|EFJ31256.1| hypothetical protein SELMODRAFT_61058 [Selaginella moellendorffii]
Length = 557
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/578 (44%), Positives = 358/578 (61%), Gaps = 39/578 (6%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
PWE E+ +G E E +RR++ P+LAEL + D ELRRLR ++ +ERI V K
Sbjct: 1 FPWEMEDFSKALSGEE----EQPQRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKK 56
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
G+T++V++ IH KWR E+V+LK + +A +M+ HE +E+RTGGLVIWRAG+ +V+YR
Sbjct: 57 LGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRKVHEELEKRTGGLVIWRAGTALVIYR 116
Query: 310 GNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILD---------HS 360
G +YAGP + ++P S + + EKS V +L +
Sbjct: 117 GKDYAGPPKE----------RWIPTESVSKPKESVEKPEKSHVSGELLGIDTQFKEFVNH 166
Query: 361 KPMTEEEAEC--NSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSR 418
P E E E + LL LGPR+ +W G +PVD D LP +K+P+RLLP GM +
Sbjct: 167 IPFIEAEYEMQMDRLLAELGPRYADWKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPK 226
Query: 419 LTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 478
L++ E T+L RLAR +P F + RN+ QGLA A++KLWEK+ + K+A+K+ +Q+T+N
Sbjct: 227 LSDKEFTNLVRLARQMPPQFVISRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAK 286
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL 538
MA+ELK LTG LL R K +++ YRGKDFLP +A+A ERE + +DVE+K R
Sbjct: 287 MADELKRLTGCVLLGREKTHMIFYRGKDFLPAPIAAAFEEREAMSFANKDVEDKAR---- 342
Query: 539 EATPSGE-TEG-----QAPAGTLAEFYEAQKRWGREVSAEEREKMV-EEASKAKHARLVK 591
P+G+ TE Q P T A+ K W + E+R +V + A A+ R+ +
Sbjct: 343 -MLPTGKVTEKIVHVEQRPQETEADI--KLKEWIKNQEEEKRRAIVMKAARAARARRIER 399
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R++ + + KK +AE L+K+E M P P D+ETIT+EER +RVGL+MKAFL L
Sbjct: 400 RLDIVSSFAIRKKEKAEEALSKVEKLMKPREPSEDRETITEEERYTLQRVGLKMKAFLLL 459
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGV+ G++ENMHLHWKYRELVK++ K K +EDTA+++E ESGGILI I V KG
Sbjct: 460 GRRGVYSGIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQ 519
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
++YRGKNYRRP LRP NLLTK KAL R QR E
Sbjct: 520 VFLYYRGKNYRRPEELRPHNLLTKRKALARYTETQRRE 557
>gi|302761182|ref|XP_002964013.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
gi|300167742|gb|EFJ34346.1| hypothetical protein SELMODRAFT_20706 [Selaginella moellendorffii]
Length = 555
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 262/578 (45%), Positives = 357/578 (61%), Gaps = 42/578 (7%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
PWE E+ +G E E +RR++ P+LAEL + D ELRRLR ++ +ERI V K
Sbjct: 2 FPWEMEDFSKAPSGEE----EQPQRRVRPPSLAELVLPDAELRRLRTMIIHTKERIKVKK 57
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
G+T++V++ IH KWR E+V+LK + +A +M+ HE +E+RTGGLVIWRAG+ +V+YR
Sbjct: 58 LGITRNVVQAIHQKWRTSEIVKLKCDQEVAMNMRKVHEELEKRTGGLVIWRAGAALVIYR 117
Query: 310 GNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILD---------HS 360
G +YAGP + ++P S + + EKS V +L +
Sbjct: 118 GKDYAGPPKE----------RWIPTESVSKPKESVEKPEKSHVSGELLGIDTQFKEFVNH 167
Query: 361 KPMTEEEAEC--NSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSR 418
P E E E + LL LGPR+ +W G +PVD D LP +K+P+RLLP GM +
Sbjct: 168 IPFIEAEYEMQMDRLLAELGPRYADWKGDRPVPVDGDKLPAIDHNFKSPYRLLPYGMEPK 227
Query: 419 LTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 478
L++ E T+L RLAR +P F + RN+ QGLA A++KLWEK+ + K+A+K+ +Q+T+N
Sbjct: 228 LSDREFTNLVRLARQMPPQFVISRNKGLQGLAKAMVKLWEKTEITKVAIKQSVQSTDNAK 287
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL 538
MA+ELK LTG LL R K +++ YRGKDFLP +A+A ERE + +DVE+K R
Sbjct: 288 MADELKRLTGCVLLGREKTHMIFYRGKDFLPAPIAAAFEEREAMSFANKDVEDKAR---- 343
Query: 539 EATPSGE-TEG-----QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKR 592
P+G+ TE Q P T A+ K W + E+R +V KA A +R
Sbjct: 344 -MLPTGKVTEKIVHVEQRPQETEADI--KLKEWIKNQEEEKRRAIV---MKAARAARARR 397
Query: 593 IEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL- 651
IE +L ++ KK +AE L+K+E M P P D+ETIT+EER +RVGL+MKAFL L
Sbjct: 398 IERRLDIAVRKKEKAEEALSKVEKLMKPREPSEDRETITEEERYTLQRVGLKMKAFLLLA 457
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGV+ G++ENMHLHWKYRELVK++ K K +EDTA+++E ESGGILI I V KG
Sbjct: 458 GRRGVYSGIIENMHLHWKYRELVKVVYKGKDRMDIEDTAKMIECESGGILIGIYPVSKGQ 517
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
++YRGKNYRRP LRP NLLTK KAL R QR E
Sbjct: 518 VFLYYRGKNYRRPEELRPHNLLTKRKALARYTETQRRE 555
>gi|449441730|ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 760
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 296/783 (37%), Positives = 426/783 (54%), Gaps = 66/783 (8%)
Query: 32 FSSS---SRKTPSFQLLKPFSSLRTNQNP----RTDSQNQQFPKPRSPST------SAPW 78
FSSS S PSF+ P L T+ NP T SQ+ P+P S S +APW
Sbjct: 7 FSSSLPRSLIPPSFRSHSPLLHLSTH-NPISATSTPSQSSVLPEPPSISNAAVNLRTAPW 65
Query: 79 LNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGL 138
+ +P Q +E+ P + R + SD GR+ R L + G+
Sbjct: 66 MKAPLHLQP------------QQQEEEGVDPANPKRRNGSDGSGRDKCSRA---LGDSGI 110
Query: 139 GSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSL---LPWERE 195
+ I + E ++ E V ++EG E+ +PWE++
Sbjct: 111 DKTGKYAMRRIAKSIGKLRRNGDLGETRMKLEEVEFGGF--DLEGFEESGTRRRMPWEKD 168
Query: 196 EEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQD 255
++ + RR + K T AEL ++ L RL+ + + + V K G+TQD
Sbjct: 169 DDGIV----------LRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQD 218
Query: 256 VMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY-- 313
V+ +I W ++EL LKF L+ +M A EIVE +TGG+V+W + +VVYRG NY
Sbjct: 219 VVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPL 278
Query: 314 -AGPSSKPQ-------PLDGDGDTLFVPHVSSTDGSTARSVD-------EKSEVPVRILD 358
S+K Q P+ + DT F G RS++ E S + +
Sbjct: 279 NLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESG-LNRSINDNDGEWEEASSFFLIRHE 337
Query: 359 HSKPMTEE--EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMR 416
+ +P++ E E + LLD LGPRF +WW LPVDAD+LP V GY PFR P +
Sbjct: 338 NLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTK 397
Query: 417 SRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNN 476
LT+A + LR+LA SLP HF LGRNR QGLA +ILKLWEKS++AKIA+K G+ NT+N
Sbjct: 398 QNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDN 457
Query: 477 KLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSK 536
+ MA ELK+LTGGTLL RNKF I+LYRG DFLP VA ++ +RE ++ Q EE R K
Sbjct: 458 EQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENSRLK 517
Query: 537 TLE--ATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIE 594
E + E + AGTL++F + + + ++ EA K K R ++ E
Sbjct: 518 ASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKGKIIRGLRMQE 577
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
+L + K ++ + L K+ AS PD DQE IT+EER FR++GL+M + L LG R
Sbjct: 578 RRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTLGRR 637
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
GVFDGV+E +H HWK+RE+VK+IT Q+ V TA+LLE ESGGIL++++++ +G+A+I
Sbjct: 638 GVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKLKEGYAII 697
Query: 715 FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
+RGKNY+RP+ +NLLTK KAL RS+ MQR +L + + I +++ E+ +D
Sbjct: 698 IFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKIYELQHELENVRD 757
Query: 775 EED 777
E+
Sbjct: 758 SEE 760
>gi|224127512|ref|XP_002329296.1| predicted protein [Populus trichocarpa]
gi|222870750|gb|EEF07881.1| predicted protein [Populus trichocarpa]
Length = 687
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 256/601 (42%), Positives = 354/601 (58%), Gaps = 77/601 (12%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
LPW REE G R ++ K + AEL+++ E L RLR +R + V K
Sbjct: 117 LPWVREER----------VGNWRMKKEKVVSKAELSLDKELLERLRGEAAKMRTWVKVKK 166
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
AG+TQ V+ +I WR EL +KF+ L +M A +IVE TGGLV+W + VVYR
Sbjct: 167 AGVTQSVVDEIRLTWRTSELAMIKFYMPLCRNMNRARDIVE--TGGLVVWTRKDIHVVYR 224
Query: 310 GNNYAGPSS----------KPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDH 359
G NY + QP++G +LF
Sbjct: 225 GCNYQWKKNFNTATIEENLNTQPING---SLF---------------------------- 253
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
E E + LLD LGPRF +WW LPVDADLLP V G+++P RL P MRS+L
Sbjct: 254 -------ERETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVKGFRSPSRLCPPRMRSKL 306
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
+ E+T LR+LA+SLP HF LGRNR QGLA AILKLWEK+++AKIAVK G+ NTNN+ M
Sbjct: 307 KDDELTYLRKLAQSLPTHFVLGRNRRLQGLAAAILKLWEKTIIAKIAVKWGVPNTNNEQM 366
Query: 480 AEELK------------SLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQ 527
A+ELK SLTGG LL RNKF+I+LYRGKDFLP VA+ + +RE ++ Q
Sbjct: 367 ADELKAKIFLMLMLYTQSLTGGVLLLRNKFFIILYRGKDFLPGQVANVIVDREIALRKCQ 426
Query: 528 DVEEKVRSKTLEAT--PSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAK 585
EE R K +E + P G T + GTL EF E Q ++ + + ++ EA K K
Sbjct: 427 TNEEGARMKAIETSYMPGGPT-NTSRCGTLYEFQEFQIKFQKTAKGDSEIQL--EAYKEK 483
Query: 586 HARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRM 645
R ++ E++L + ++K + + L+K+ ++ VPS D DQ +T+EER FR++GL++
Sbjct: 484 LERELRNQEYRLRILKSKIEKPAKDLSKLNSAWVPSPRDADQGIMTEEERECFRKIGLKL 543
Query: 646 KAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIE 705
+ L LG RGVF+GV+E +H HWK+RE+VK+IT Q+ + V TA LLE ES GIL++++
Sbjct: 544 RGSLVLGRRGVFEGVMEGLHQHWKHREVVKVITMQRVFSQVIHTATLLEAESDGILVSVD 603
Query: 706 RVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
++ +G A+I YRGKNY+RP+ L +NLLTK +ALKRS+ +QR +L + E I +
Sbjct: 604 KLKEGHAIIIYRGKNYKRPLRLLKKNLLTKREALKRSLLIQRVGSLKYFANQRERVISDL 663
Query: 766 K 766
K
Sbjct: 664 K 664
>gi|449490080|ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
splicing facilitator CRS1, chloroplastic-like [Cucumis
sativus]
Length = 760
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 294/783 (37%), Positives = 425/783 (54%), Gaps = 66/783 (8%)
Query: 32 FSSS---SRKTPSFQLLKPFSSLRTNQNP----RTDSQNQQFPKPRSPST------SAPW 78
FSSS S PSF+ P L T+ NP T SQ+ P+P S S +APW
Sbjct: 7 FSSSLPRSLIPPSFRSHSPLLHLSTH-NPISATSTPSQSSVLPEPPSISNAAVNLRTAPW 65
Query: 79 LNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGL 138
+ +P Q +E+ P + R + SD GR+ R L + G+
Sbjct: 66 MKAPLHLQP------------QQQEEEGVDPANPKRRNGSDGSGRDKCSRA---LGDSGI 110
Query: 139 GSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSL---LPWERE 195
+ I + E ++ E V ++EG E+ +PWE++
Sbjct: 111 DKTGKYAMRRIAKSIGKLRRNGDLGETRMKLEEVEFGDF--DLEGFEESGTRRRMPWEKD 168
Query: 196 EEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQD 255
++ + RR + K T AEL ++ L RL+ + + + V K G+TQD
Sbjct: 169 DDGIV----------LRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQD 218
Query: 256 VMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY-- 313
V+ +I W ++EL LKF L+ +M A EIVE +TGG+V+W + +V+YRG NY
Sbjct: 219 VVNQIQFMWERNELAMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVIYRGCNYPL 278
Query: 314 -AGPSSKPQ-------PLDGDGDTLFVPHVSSTDGSTARSVD-------EKSEVPVRILD 358
S+K Q P+ + DT F G RS++ E S + +
Sbjct: 279 NLKHSTKKQVHISPQNPVKVETDTHFSLSGHYESG-LNRSINDNDGEWEEASSFFLIRHE 337
Query: 359 HSKPMTEE--EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMR 416
+ +P++ E E + LLD LGPRF +WW LPVDAD+L V GY PFR P +
Sbjct: 338 NLQPLSGSLYERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPPFRRCPPYTK 397
Query: 417 SRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNN 476
LT+A + LR+LA SLP HF LGRNR QGLA +ILKLWEKS++AKIA+K G+ NT+N
Sbjct: 398 QNLTDAGLQHLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDN 457
Query: 477 KLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSK 536
+ MA ELK+LTGGTLL RNKF I+LYRG DFLP VA ++ +RE ++ Q EE R K
Sbjct: 458 EQMALELKNLTGGTLLLRNKFVIILYRGNDFLPVGVADSIIQREVELQRWQLHEENSRLK 517
Query: 537 TLE--ATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIE 594
E + E + AGTL++F + + + ++ EA K K R ++ E
Sbjct: 518 ASEFFCFDTENMEERGKAGTLSDFKDITVGYEDLSTGSTESRLQAEAEKXKIIRGLRMQE 577
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
+L + K ++ + L K+ AS PD DQE IT+EER FR++GL+M + L LG R
Sbjct: 578 RRLKILNFKVEKSTKELTKLNASWRRVEPDADQELITNEERICFRKMGLKMDSCLTLGRR 637
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
GVFDGV+E +H HWK+RE+VK+IT Q+ V TA+LLE ESGGIL++++++ +G+A+I
Sbjct: 638 GVFDGVIEGLHQHWKHREVVKVITMQRAFNQVNYTAKLLEAESGGILVSVDKLKEGYAII 697
Query: 715 FYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
+RGKNY+RP+ +NLLTK KAL RS+ MQR +L + + I +++ E+ +D
Sbjct: 698 IFRGKNYKRPLHSVSKNLLTKRKALSRSLEMQRIGSLKFFANQRQQKIYELQHELEKVRD 757
Query: 775 EED 777
E+
Sbjct: 758 SEE 760
>gi|255551422|ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
gi|223544130|gb|EEF45655.1| conserved hypothetical protein [Ricinus communis]
Length = 742
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 294/772 (38%), Positives = 416/772 (53%), Gaps = 52/772 (6%)
Query: 25 PSLNHLPFSSSSRKTPSFQLLKPFSSLRTNQNPR-TDSQNQQFPKPRSPST--------- 74
PS L F S + S SSL QNP+ ++N +F P++
Sbjct: 2 PSALFLQFFSYNPIASSLNPATNKSSLNNAQNPKFATNKNTEFTLLSVPNSQSNAPIKVP 61
Query: 75 SAPWLNNWSRPKPPSTENANKLGGRNQIDEKQT-SPDSYPRYSDSDNKGRNAIERIVLRL 133
+APW+ +P N +K +N + D +S +G+ A+E+IV +
Sbjct: 62 TAPWMKGPLLLQPHELINLSKPRNKNSSNNANIEKSDKVLTGKESGVRGKKAMEKIVKSI 121
Query: 134 RNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWE 193
L +E E+ + A + +L+ + + + + L PWE
Sbjct: 122 EQL------QENQALEKTQCDSQAYEKTQLDSEAFEIGEKLGLIREHGDFGVNKKLKPWE 175
Query: 194 REEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLT 253
REE+ R ++ KA T AEL +E E L LR +R+ + V KAG+T
Sbjct: 176 REEK----------FVYWRIKKEKAVTKAELILEKELLEILRTEASKMRKWVKVMKAGVT 225
Query: 254 QDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
Q V+ +I WR +EL +KF L +M A EIVE +TGGLV+W +V+YRG NY
Sbjct: 226 QSVVDQIRYAWRNNELAMVKFDLPLCRNMDRAREIVELKTGGLVVWTRKDSLVIYRGCNY 285
Query: 314 AGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRIL---DHSKPMTEE---E 367
S HVS+ D E+ +P I D + P E
Sbjct: 286 HLTKS--------------SHVSTMDEKIGSKDGEEEYIPTSIFIGDDANTPTINGSLFE 331
Query: 368 AECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDL 427
E + LLD LGPRF +WW LPVDADLLP V G+ P R R++L + E+T L
Sbjct: 332 RETDRLLDGLGPRFVDWWMRKPLPVDADLLPEVVAGFMPPSRF--HYARAKLKDDELTYL 389
Query: 428 RRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLT 487
R+LA +LP HF LGRNR QGLA AILKLWE+SL+AKIAVK GI NT+N+ MA ELK LT
Sbjct: 390 RKLAYALPTHFVLGRNRRLQGLAAAILKLWERSLIAKIAVKWGIPNTDNEQMANELKHLT 449
Query: 488 GGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGE-- 545
GG LL RNKF+I+L+RGKDFLP VA + +RE K Q EE R K +E + + +
Sbjct: 450 GGVLLLRNKFFIILFRGKDFLPCQVADLVVKRENELKICQLNEEGARLKAIETSFTDDEL 509
Query: 546 TEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
GTL EF + Q R+ K+ EA K K R ++ EHKL + ++K
Sbjct: 510 VVKATKIGTLNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIE 569
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
++ R L+K+ ++ P+ D D E +T+EER R++GL+M++ L LG RGVFDGV+E +H
Sbjct: 570 KSARELSKLNSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLH 629
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
HWK+RE+VK+I+ Q+ A V TA+ LE E+GGIL++I+++ +G A+I YRGKNYRRP
Sbjct: 630 QHWKHREVVKVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRRPQ 689
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEED 777
L NLLTK KAL RS+ MQR +L +++I ++K ++ ++ E+
Sbjct: 690 RLL-NNLLTKRKALCRSLEMQRIGSLRFFAYQRQHSIRELKFQLAQLQESEE 740
>gi|186523322|ref|NP_197122.2| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
gi|374095377|sp|Q9LF10.2|CRS1_ARATH RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|332004875|gb|AED92258.1| ortholog of maize chloroplast splicing factor CRS1 [Arabidopsis
thaliana]
Length = 720
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 283/737 (38%), Positives = 397/737 (53%), Gaps = 91/737 (12%)
Query: 46 KPFSSLRTNQNPR--TDSQNQQFPKPRSPST------SAPWLNNWSRPKPPSTENANKLG 97
+ F SL TN + R SQ QF + R S +APW+ +P + K
Sbjct: 48 RAFPSLITNSSSRRAKSSQFDQFRENRGVSDAAIKVPTAPWMKGPLLLRPDEILDTKKRN 107
Query: 98 GRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAA 157
+++EK + +S +G+ A+++IV + L SD EE ++ +
Sbjct: 108 KPRKVEEKTFKALNR---RESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLSEFEYLG 164
Query: 158 TGEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMK 217
EE++E + +PWEREEE + RRMK
Sbjct: 165 RIEEKVES-----------------KDRFGGKMPWEREEERFIL------------RRMK 195
Query: 218 ---APTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKF 274
PT AEL +++ L RLRR +R+ +NV KAG+T+ V+ KI W+ +EL ++F
Sbjct: 196 KESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTELVVNKIKSMWKLNELAMVRF 255
Query: 275 HEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPH 334
L +M+ A EI+E +TGGLV+ +VVYRG GPS + D +L+
Sbjct: 256 DVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG----GPSYSSEGQDEISSSLY--- 308
Query: 335 VSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
E E + LLD LGPR+ +WW PVDA
Sbjct: 309 --------------------------------EREADRLLDGLGPRYMDWWMRRPFPVDA 336
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAIL 454
DLLP V+GY TP R P R++LT+ E+T LR +A+ LP HF LGRN QGLA AI+
Sbjct: 337 DLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIV 396
Query: 455 KLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVAS 514
KLWEK ++AKIA+K G NTNN+ MA+EL+ LTGG L+ RNK+ IVLYRGKDFL VA
Sbjct: 397 KLWEKCIIAKIAIKWGALNTNNEEMADELRYLTGGVLILRNKYLIVLYRGKDFLSDEVAD 456
Query: 515 ALAEREQCAKQIQDVEEKVRSKTLE----ATPSGETEGQAPAGTLAEFYEAQKRWGREVS 570
+ +RE+ + Q EE R +E T + + +GTL EF E Q+++G E+
Sbjct: 457 LVEDRERLLSRYQHFEETKRESDIELLEVVTNGKQLKETNKSGTLLEFQELQRKFG-EMD 515
Query: 571 AEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETI 630
E EA KA+ + +K EHKL++ ++K ++ L K+ + PS D D E +
Sbjct: 516 PRNLET---EAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEIL 572
Query: 631 TDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTA 690
T+EER RR+GL+M + L LG RGVF GV+E +H HWK+RE+ K+IT QK + V TA
Sbjct: 573 TNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTA 632
Query: 691 RLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS-LRPRNLLTKAKALKRSVAMQRHE 749
+ LE ES G+LI+IE++ +G A++ YRGKNY+RP S L +NLLTK KAL+RSV MQR
Sbjct: 633 KALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRLG 692
Query: 750 ALSQHISDLENTIEQMK 766
+L E IE +K
Sbjct: 693 SLKFFAYQRERAIEDLK 709
>gi|5123569|emb|CAB45335.1| putative protein [Arabidopsis thaliana]
gi|7269874|emb|CAB79733.1| putative protein [Arabidopsis thaliana]
Length = 776
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/579 (41%), Positives = 336/579 (58%), Gaps = 59/579 (10%)
Query: 222 AELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATD 281
AE + + EL+RLR + + ER+ V AG+TQ ++ IH+KW DE+V+LKF E + +
Sbjct: 240 AERIVPEHELKRLRNVALRMVERVKVGSAGITQALVEAIHEKWEVDEVVKLKFSEPYSLN 299
Query: 282 MKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGS 341
MK HE++E N A P D DG+
Sbjct: 300 MKRTHEVLE-------------------NNLEANPEIHRSVEARD--------YVQEDGN 332
Query: 342 TARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKV 401
++V K E E N LLD +GPRF +W G PVDADLLP V
Sbjct: 333 YPKNV-------------PKEQLSELCELNDLLDEVGPRFHDWTGCAPFPVDADLLPGYV 379
Query: 402 DGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSL 461
+GY+ PFR+LP G++ L+N EMT++RRLAR+ P HFALGR+R QGLA A++KLW KS
Sbjct: 380 EGYRCPFRILPQGVKPCLSNTEMTEMRRLARTSPPHFALGRSRELQGLAKAMVKLWAKSA 439
Query: 462 VAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQ 521
+AKIA+KRG++NT N+ MAEELK LT G L+ RNK YIV YR VA AL ER++
Sbjct: 440 IAKIAIKRGVENTRNERMAEELKRLTRGVLVSRNKEYIVFYR--------VAEALTERQK 491
Query: 522 CAKQIQDVEEKVRSKTLEATPSGETEGQAP-----AGTLAEFYEAQKRWGREVSAEEREK 576
++ +E + + ++ ++P AGTLAE A RW S+ + E+
Sbjct: 492 EITEVLQAKEDQAREMASTRATLTSQAKSPKTQLLAGTLAETIAASSRWAPNASSVDIEE 551
Query: 577 MVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERA 636
+ E++ K A L++ +E +L + K RAER LAK++ + PS D E IT+EER
Sbjct: 552 LKRESASIKRAALIRDLELRLLYGKQKLRRAERDLAKVQKDLDPSELPTDSEIITEEERL 611
Query: 637 MFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYE 696
++R++GL M FL LG R V+DG +ENMHLHWK+RELVK+I + K+L V+ A LE E
Sbjct: 612 LYRKIGLSMDPFLLLGRREVYDGTIENMHLHWKHRELVKVIVRGKSLPQVKHIAISLEAE 671
Query: 697 SGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHIS 756
SGG+L+++++ KG+A+I YRGKNY+ P LRP NLLT+ KA RS+ +QR EAL H++
Sbjct: 672 SGGVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVA 731
Query: 757 DLENTIEQMKK------EIGVSKDEEDGNIRCSGDLKQF 789
DLE IE +K E DEE+ N+ D F
Sbjct: 732 DLEERIELLKTGQDDDMETRNKSDEEEENLYLRVDESDF 770
>gi|414870652|tpg|DAA49209.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 715
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/592 (42%), Positives = 351/592 (59%), Gaps = 28/592 (4%)
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
+E +PW +E L+ R ++ + PT AE +E EL RLRR +
Sbjct: 134 KEKSRAVPWAAARDEGLKVALR------REKKPREPTRAETELETHELHRLRRLARGIGR 187
Query: 244 RINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAG 302
KAG+T +V++++ +W +EL ++ E L M A EI+E +TGGLV+W G
Sbjct: 188 WARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKG 247
Query: 303 SVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDG---STARSVDEKSEVPVRILDH 359
+ VYRG+ Y + F+ +V D + +K E PV+
Sbjct: 248 DMHFVYRGSKYQQ--------NAKHSHTFLTNVHKDDAFQENDQSICGQKDEEPVK---- 295
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
T E E N LLD+LGPRF +WW LPVDADLLP V G+KTP+RL P G+R L
Sbjct: 296 ---GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTL 352
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
+ E+T LR+LAR LP HFALGRN QGLA AILKLWEKSL+AKIAVK GIQNTNN+ M
Sbjct: 353 ADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQM 412
Query: 480 AEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLE 539
A LK LTGGT++ RNK +I+LYRGKDFLP VA + +RE Q EE+ R K ++
Sbjct: 413 AWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKAVD 472
Query: 540 ATP-SGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE-EASKAKHARLVKRIEHKL 597
+ GE ++ GT E+ ++ E + E M+E EA K + + +K E KL
Sbjct: 473 SLQMVGELSEESSLGTFREYQGFHAKFVHE-NTENSNTMIELEAEKYRLEKELKDHEWKL 531
Query: 598 AVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVF 657
+V K R+ + LAK+ +S PS D+E +T+EE+ MFRR+G +M + LG RG+F
Sbjct: 532 SVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIF 591
Query: 658 DGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYR 717
DGV+E +H HWK++E+VK+ITKQ + A LLE E+GGILIA+E++ A+I YR
Sbjct: 592 DGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYR 651
Query: 718 GKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
GKNYRRP NLLTK +AL+RS+ +QR ++ + + + +I ++K+++
Sbjct: 652 GKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSILELKRKL 703
>gi|9755828|emb|CAC01859.1| putative protein [Arabidopsis thaliana]
Length = 718
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 283/737 (38%), Positives = 396/737 (53%), Gaps = 93/737 (12%)
Query: 46 KPFSSLRTNQNPR--TDSQNQQFPKPRSPST------SAPWLNNWSRPKPPSTENANKLG 97
+ F SL TN + R SQ QF + R S +APW+ +P + K
Sbjct: 48 RAFPSLITNSSSRRAKSSQFDQFRENRGVSDAAIKVPTAPWMKGPLLLRPDEILDTKKRN 107
Query: 98 GRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAA 157
+++EK + +S +G+ A+++IV + L SD EE ++ +
Sbjct: 108 KPRKVEEKTFKALNR---RESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLSEFEYLG 164
Query: 158 TGEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMK 217
EE++E + +PWEREEE + RRMK
Sbjct: 165 RIEEKVES-----------------KDRFGGKMPWEREEERFIL------------RRMK 195
Query: 218 ---APTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKF 274
PT AEL +++ L RLRR +R+ +NV KAG+T+ V+ KI W+ +EL ++F
Sbjct: 196 KESVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTELVVNKIKSMWKLNELAMVRF 255
Query: 275 HEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPH 334
L +M+ A EI+E TGGLV+ +VVYRG GPS + D +L+
Sbjct: 256 DVPLCRNMERAQEIIE--TGGLVVLSKKEFLVVYRG----GPSYSSEGQDEISSSLY--- 306
Query: 335 VSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
E E + LLD LGPR+ +WW PVDA
Sbjct: 307 --------------------------------EREADRLLDGLGPRYMDWWMRRPFPVDA 334
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAIL 454
DLLP V+GY TP R P R++LT+ E+T LR +A+ LP HF LGRN QGLA AI+
Sbjct: 335 DLLPEVVNGYMTPSRRCPPNTRAKLTDEELTYLRNIAQPLPFHFVLGRNYGLQGLASAIV 394
Query: 455 KLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVAS 514
KLWEK ++AKIA+K G NTNN+ MA+EL+ LTGG L+ RNK+ IVLYRGKDFL VA
Sbjct: 395 KLWEKCIIAKIAIKWGALNTNNEEMADELRYLTGGVLILRNKYLIVLYRGKDFLSDEVAD 454
Query: 515 ALAEREQCAKQIQDVEEKVRSKTLE----ATPSGETEGQAPAGTLAEFYEAQKRWGREVS 570
+ +RE+ + Q EE R +E T + + +GTL EF E Q+++G E+
Sbjct: 455 LVEDRERLLSRYQHFEETKRESDIELLEVVTNGKQLKETNKSGTLLEFQELQRKFG-EMD 513
Query: 571 AEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETI 630
E EA KA+ + +K EHKL++ ++K ++ L K+ + PS D D E +
Sbjct: 514 PRNLET---EAEKARLEKELKSQEHKLSILKSKIEKSNMELFKLNSLWKPSEGDDDIEIL 570
Query: 631 TDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTA 690
T+EER RR+GL+M + L LG RGVF GV+E +H HWK+RE+ K+IT QK + V TA
Sbjct: 571 TNEERECLRRIGLKMNSSLVLGRRGVFFGVMEGLHQHWKHREVAKVITMQKLFSRVVYTA 630
Query: 691 RLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS-LRPRNLLTKAKALKRSVAMQRHE 749
+ LE ES G+LI+IE++ +G A++ YRGKNY+RP S L +NLLTK KAL+RSV MQR
Sbjct: 631 KALETESNGVLISIEKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVVMQRLG 690
Query: 750 ALSQHISDLENTIEQMK 766
+L E IE +K
Sbjct: 691 SLKFFAYQRERAIEDLK 707
>gi|242078893|ref|XP_002444215.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
gi|241940565|gb|EES13710.1| hypothetical protein SORBIDRAFT_07g015120 [Sorghum bicolor]
Length = 728
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/599 (41%), Positives = 351/599 (58%), Gaps = 40/599 (6%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
+PW +E L+ R ++ + PT AE +E +EL RLRR + K
Sbjct: 139 VPWAAARDEGLKVALR------REKKPRKPTRAETELETDELDRLRRLARGMGRWARAKK 192
Query: 250 AGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
AG+T +V+ ++ +W +EL ++ E L M A EI+E +TGGLV+W G + VY
Sbjct: 193 AGVTDEVVEEMRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDIHFVY 252
Query: 309 RGNNYAGPSSKP--------------QPLDGDGDTLFVPHVSSTDGSTARSVDEKSEVPV 354
+G+ Y + Q + G+ D F + S G +K E PV
Sbjct: 253 KGSKYQQNAKHSHTFVTNVHKGSLVKQNVRGEADDAFQENDQSICG-------QKDEEPV 305
Query: 355 RILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTG 414
+ T E E N LLD+LGPRF +WW LPVDADLLP + G+KTPFR P G
Sbjct: 306 K-------GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFIPGFKTPFRQCPPG 358
Query: 415 MRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNT 474
+R L + E+T LR+LAR LP HFALGRN QGLA AILKLWEKSL+AKIAVK GIQNT
Sbjct: 359 VRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKVGIQNT 418
Query: 475 NNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVR 534
NN+ MA LK LTGGT++ RNK +++LYRGKDFLP VA + +RE Q EE+ R
Sbjct: 419 NNEQMAWNLKHLTGGTVILRNKDFVILYRGKDFLPGGVAQTVIQREAQVDDEQVKEEEAR 478
Query: 535 SK---TLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE-EASKAKHARLV 590
K +L+ ++ ++ GT E+ + + + E+ M+E EA K + + +
Sbjct: 479 LKAVDSLQMVGELSSDEESSVGTFREYKDFHADFV-HANTEKSNTMIELEAEKYRLEKEL 537
Query: 591 KRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLP 650
K E KL++ K R+ + LAK+ +S PS D+E +T+EE+ MFRR+G +M +
Sbjct: 538 KDHEWKLSILNKKIERSNQALAKLRSSWSPSEQSADRELLTEEEKIMFRRIGRKMDGLVL 597
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG RG+FDGV+E +H HWK++E+VK+ITKQ + TA LLE E+GGILIA+E++
Sbjct: 598 LGRRGIFDGVIEEIHQHWKHKEVVKVITKQNQARQIMYTANLLEVETGGILIAVEKLTTS 657
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
A+I YRGKNYRRP NLLTK +AL+RS+ +QR ++ + + + +I ++K+ +
Sbjct: 658 HAIILYRGKNYRRPAKSSFSNLLTKREALRRSLEVQRRGSMKYFVRERQKSISELKRRL 716
>gi|357145812|ref|XP_003573775.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 730
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/590 (41%), Positives = 344/590 (58%), Gaps = 20/590 (3%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
+PW +E+L+ R ++++ PT AE + L RLRR + K
Sbjct: 133 VPWSAARDEHLKVVLR------REKKVREPTRAERELGPALLERLRRAARGMDRWARAKK 186
Query: 250 AGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
AG+T +V+ + +W EL ++ E L M A EI+E +TGGLV+W G + VY
Sbjct: 187 AGVTDEVVEDVRSEWSSGQELAGVRIVEPLRRCMDRAREILEIKTGGLVVWTKGDIHFVY 246
Query: 309 RGNNYAGPSSKPQPLDGDGDTLFVPH---------VSSTDGSTARSVDEK-SEVPVRILD 358
RG++Y D + P + +G + EK S + ++ +
Sbjct: 247 RGSDYVHNMKYSHNFVADIQKVRTPQEKYKSNVELLGKHNGKAKGAFREKDSSIDIQTYE 306
Query: 359 HSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSR 418
T E E N LLDSLGPRF +WW LPVDADLLP V G+KTPFR P G+R
Sbjct: 307 EPVKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDADLLPEVVLGFKTPFRQCPPGVRPT 366
Query: 419 LTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 478
L + E+T LR+LAR LP HFALGRN QGLA AILKLWEKSLVAKIAVK GI+NTNN+
Sbjct: 367 LADEELTYLRKLARPLPAHFALGRNTKLQGLAAAILKLWEKSLVAKIAVKVGIENTNNEQ 426
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL 538
MA LK LTGGT++ RNK +I+LYRGKDFLP V ++ + E Q EE+ R
Sbjct: 427 MAWNLKHLTGGTIILRNKDFIILYRGKDFLPAGVKQSVIQHEAQVDAQQVKEEEARLSGT 486
Query: 539 EATP--SGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHK 596
E+ +G ++ AGT E+ + Q E + + + EA K + + +K E +
Sbjct: 487 ESLQMFAGLPSVESSAGTFREYQDFQVNQAHETTINNKAMIELEAEKHRLEKELKDQERR 546
Query: 597 LAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGV 656
L + K R+ + LAK+ +S PS D+E +T+EER +FR++GL+M + LG RGV
Sbjct: 547 LFILTKKIERSNQALAKLHSSWNPSEQSADKELLTEEERMIFRKIGLKMDEHVLLGRRGV 606
Query: 657 FDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFY 716
FDGV+E +H HWK++E+VK+ITKQ + T+ LLE E+GG+LIA +++P A+I Y
Sbjct: 607 FDGVIEEIHQHWKHKEIVKVITKQNQSYQITYTSMLLEVETGGVLIATQKLPHSHAIILY 666
Query: 717 RGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
RGKNYRRP P NLLTK +AL+RSV +QR ++ ++ + + +IE+++
Sbjct: 667 RGKNYRRP-EKSPSNLLTKREALRRSVEVQRRGSMKYYVWERQKSIEELQ 715
>gi|162463484|ref|NP_001105008.1| chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic precursor [Zea mays]
gi|75173308|sp|Q9FYT6.1|CRS1_MAIZE RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|9837550|gb|AAG00595.1|AF290414_1 CRS1 [Zea mays]
Length = 715
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 252/592 (42%), Positives = 351/592 (59%), Gaps = 28/592 (4%)
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
+E +PW +E L+ R ++ + PT AE +E ELRRLRR +
Sbjct: 134 KEKSRAVPWAAARDEGLKVALR------REKKPREPTRAETELETHELRRLRRLARGIGR 187
Query: 244 RINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAG 302
KAG+T +V++++ +W +EL ++ E L M A EI+E +TGGLV+W G
Sbjct: 188 WARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKG 247
Query: 303 SVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDG---STARSVDEKSEVPVRILDH 359
+ VYRG+ Y + F+ +V D + +K E PV+
Sbjct: 248 DMHFVYRGSKYQQ--------NAKHSHTFLTNVHKDDAFQENDQSICGQKDEEPVK---- 295
Query: 360 SKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRL 419
T E E N LLD+LGPRF +WW LPVDADLLP V G KTP+RL P G+R L
Sbjct: 296 ---GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGSKTPYRLCPPGVRPTL 352
Query: 420 TNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLM 479
+ E+T LR+LAR LP HFALGRN QGLA AILKLWEKSL+AKIAVK GIQNTNN+ M
Sbjct: 353 ADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQM 412
Query: 480 AEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLE 539
A LK LTGGT++ RNK +I+LYRGKDFLP VA + +RE Q EE+ R K ++
Sbjct: 413 AWNLKHLTGGTVILRNKDFIILYRGKDFLPGGVAQTVIQREAQVHDEQVKEEEARLKAVD 472
Query: 540 ATP-SGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE-EASKAKHARLVKRIEHKL 597
+ GE ++ GT E+ ++ E + E M+E EA K + + +K E KL
Sbjct: 473 SLQMVGELSEESSLGTFREYQGFHAKFVHE-NTENSNTMIELEAEKYRLEKELKDHEWKL 531
Query: 598 AVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVF 657
+V K R+ + LAK+ +S PS D+E +T+EE+ MFRR+G +M + LG RG+F
Sbjct: 532 SVLNKKIERSNQALAKLHSSWSPSEQSADREHLTEEEKIMFRRIGRKMDGLVLLGRRGIF 591
Query: 658 DGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYR 717
DGV+E +H HWK++E+VK+ITKQ + A LLE E+GGILIA+E++ A+I YR
Sbjct: 592 DGVIEEIHQHWKHKEVVKVITKQNQTRQIMYAASLLEVETGGILIAVEKLTTSHAIILYR 651
Query: 718 GKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
GKNYRRP NLLTK +AL+RS+ +QR ++ + + + +I ++K+++
Sbjct: 652 GKNYRRPAKSSFSNLLTKREALRRSIEVQRRGSMKYFVRERQKSILELKRKL 703
>gi|222640429|gb|EEE68561.1| hypothetical protein OsJ_27045 [Oryza sativa Japonica Group]
Length = 725
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/567 (43%), Positives = 344/567 (60%), Gaps = 11/567 (1%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRK-DELV 270
R ++ + PT AE +E EL RLRR KAG+T +V+ ++ +W K EL
Sbjct: 141 REKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGITDEVVEEVRGQWAKGQELA 200
Query: 271 RLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTL 330
++ E L M A EI+E +TGGLV+W G + VYRG++Y + + + + L
Sbjct: 201 GVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKRHRDFVNYNEEL 260
Query: 331 FVPHVSSTDGSTAR--SVDEK--SEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEW 384
P S+ S + S DE ++ KP+ T E E N LLDSLGPRF +W
Sbjct: 261 -SPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDW 319
Query: 385 WGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNR 444
W LPVDADLLP V +KTPFR P G+R L + E+T LR+ AR LP HF LGRN
Sbjct: 320 WWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNT 379
Query: 445 NHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
QGLA AILKLWEKSL+AK+AVK GIQNTN++ MA LK LTGGT++ RNK YI++YRG
Sbjct: 380 KLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRG 439
Query: 505 KDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQ 562
KDFLP VA ++ ERE Q EE+ R K ++ G + ++ GT E+ +
Sbjct: 440 KDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFH 499
Query: 563 KRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSG 622
R + E ++ EA K + + +K E +L++ K R+ ++LAK+ +S PS
Sbjct: 500 DSHARRTT-ENNFRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSK 558
Query: 623 PDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKT 682
D D+E +T+EER +FR++GL+M + LG RGVF+GV+E +H HWK++E+VK+ITKQ
Sbjct: 559 KDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQ 618
Query: 683 LAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRS 742
+ + T+ +LE E+GG LIAIER A+I YRGKNYRRP P NLLTK +AL+RS
Sbjct: 619 ASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRS 678
Query: 743 VAMQRHEALSQHISDLENTIEQMKKEI 769
+ +QR ++ + + +I+++K+E+
Sbjct: 679 IEVQRRGSMKYFAQERKKSIDELKREL 705
>gi|115476078|ref|NP_001061635.1| Os08g0360100 [Oryza sativa Japonica Group]
gi|75132343|sp|Q6YYA3.1|CRS1_ORYSJ RecName: Full=Chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic; AltName: Full=Chloroplastic RNA
splicing factor 1; AltName: Full=Protein CHLOROPLAST RNA
SPLICING 1; Flags: Precursor
gi|38637564|dbj|BAD03815.1| putative CRS1 [Oryza sativa Japonica Group]
gi|113623604|dbj|BAF23549.1| Os08g0360100 [Oryza sativa Japonica Group]
Length = 725
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/567 (43%), Positives = 344/567 (60%), Gaps = 11/567 (1%)
Query: 212 RRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRK-DELV 270
R ++ + PT AE +E EL RLRR KAG+T +V+ ++ +W K EL
Sbjct: 141 REKKTRVPTRAETELEAGELERLRRAARGKERWARAKKAGITDEVVEEVRGQWAKGQELA 200
Query: 271 RLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTL 330
++ E L M A EI+E +TGGLV+W G + VYRG++Y + + + + L
Sbjct: 201 GVRIVEPLRRCMDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKRHRDFVNYNEEL 260
Query: 331 FVPHVSSTDGSTAR--SVDEK--SEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEW 384
P S+ S + S DE ++ KP+ T E E N LLDSLGPRF +W
Sbjct: 261 -SPVTSNNPTSQGKYWSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDW 319
Query: 385 WGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNR 444
W LPVDADLLP V +KTPFR P G+R L + E+T LR+ AR LP HF LGRN
Sbjct: 320 WWNTPLPVDADLLPEVVPDFKTPFRQCPPGVRPALADEELTYLRKHARPLPTHFVLGRNT 379
Query: 445 NHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
QGLA AILKLWEKSL+AK+AVK GIQNTN++ MA LK LTGGT++ RNK YI++YRG
Sbjct: 380 KLQGLAAAILKLWEKSLIAKVAVKVGIQNTNHEQMARNLKRLTGGTVILRNKDYIIIYRG 439
Query: 505 KDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQ 562
KDFLP VA ++ ERE Q EE+ R K ++ G + ++ GT E+ +
Sbjct: 440 KDFLPGGVAESVIERESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFH 499
Query: 563 KRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSG 622
R + E ++ EA K + + +K E +L++ K R+ ++LAK+ +S PS
Sbjct: 500 DSHARRTT-ENNFRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSK 558
Query: 623 PDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKT 682
D D+E +T+EER +FR++GL+M + LG RGVF+GV+E +H HWK++E+VK+ITKQ
Sbjct: 559 KDGDRELLTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQ 618
Query: 683 LAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRS 742
+ + T+ +LE E+GG LIAIER A+I YRGKNYRRP P NLLTK +AL+RS
Sbjct: 619 ASQITYTSMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRS 678
Query: 743 VAMQRHEALSQHISDLENTIEQMKKEI 769
+ +QR ++ + + +I+++K+E+
Sbjct: 679 IEVQRRGSMKYFAQERKKSIDELKREL 705
>gi|297807647|ref|XP_002871707.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
gi|297317544|gb|EFH47966.1| ATCRS1/CRS1 [Arabidopsis lyrata subsp. lyrata]
Length = 727
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 281/783 (35%), Positives = 403/783 (51%), Gaps = 125/783 (15%)
Query: 35 SSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPST---------SAPWLNNWSRP 85
S+R PS + SSL NQNP +++ QF + R +APW+
Sbjct: 8 SARAYPSLII---NSSLNPNQNPSNAAKSPQFDQFREKRGLSDAAMKVPTAPWMKGPLLL 64
Query: 86 KPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEE 145
+P + K +++EK + +S +G+ A+++IV + L GSD EE
Sbjct: 65 RPDEIVDTEKRNKPRKVEEKTFKALNR---RESGVRGKKAMKKIVRNVEKLDEGSDSEET 121
Query: 146 GEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGE 205
++ + E++E + +PW+REEE +
Sbjct: 122 HMDDLSEFEYLGRISEKIES-----------------KDRFGGKMPWDREEERFIM---- 160
Query: 206 KPAGETRRRRMK---APTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHD 262
RRMK PT AEL +++ L RLRR +R+ +NV KAG+T+ V+ +I
Sbjct: 161 --------RRMKKERVPTTAELILDEGLLNRLRREASKMRKWVNVRKAGVTETVVNEIRL 212
Query: 263 KWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQP 322
W+ EL ++F L +M+ A EI+E +TGGLV+ +VVYRG GPS +
Sbjct: 213 IWKLKELAMVRFDVPLCRNMERAQEIIEMKTGGLVVLSKKEFLVVYRG----GPSYSSEE 268
Query: 323 LDGDGDTLFVPHVSSTDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQ 382
D + S + E EA + LLD LGPR+
Sbjct: 269 TRSGQDEI-----------------------------SSSLYEREA--DRLLDGLGPRYL 297
Query: 383 EWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGR 442
+WW PVDADLLP V+GY+TP R P R++L++ E+T LR +A++LP HF LGR
Sbjct: 298 DWWMRRPFPVDADLLPQVVNGYRTPSRRCPPNTRAKLSDEELTYLRNIAQALPFHFVLGR 357
Query: 443 NRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLY 502
N QGLA AI+KLWEK ++AKIA+K G NTNN+ MA+ELK LTGG L+ RNK+ I+LY
Sbjct: 358 NHGLQGLASAIVKLWEKCIIAKIAIKWGALNTNNEEMADELKHLTGGVLILRNKYLIILY 417
Query: 503 RGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLE----ATPSGETEGQAPAGTLAEF 558
RGKDFL V + +RE+ + Q EE R +E T + + + +GTL EF
Sbjct: 418 RGKDFLSDEVTDLVDDRERLLRGYQHFEETKREGDIEILEVVTDGKQLKETSKSGTLLEF 477
Query: 559 YEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASM 618
E Q+++G E + EA KA+ + +K EHKL++ ++K ++ L K+ +
Sbjct: 478 QELQRKFGE----METRNLETEAEKARLEKELKSQEHKLSILKSKIEKSTMELFKLNSLW 533
Query: 619 VPSGPDYDQETITDEERAMFRRVGLRMKAFLP---------------------------- 650
PS D D E T+EER RR+GL+M + L
Sbjct: 534 KPSERDDDIEIFTNEERECLRRIGLKMSSSLVLGRSNRIHSCLLLIPYPLAMRLIYINFI 593
Query: 651 ------LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAI 704
LG RGVF G++E +H HWK+RE+ K+IT QK + V TA+ LE ES G+LI+I
Sbjct: 594 FVFVSFLGRRGVFVGIMEGLHQHWKHREVAKVITMQKIFSRVVYTAKSLEAESNGVLISI 653
Query: 705 ERVPKGFALIFYRGKNYRRPIS-LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIE 763
E++ +G A++ YRGKNY+RP S L +NLLTK KAL+RSVAMQR +L E IE
Sbjct: 654 EKLKEGHAILIYRGKNYKRPSSKLMAQNLLTKRKALQRSVAMQRLGSLKFFAYQRERVIE 713
Query: 764 QMK 766
+K
Sbjct: 714 DLK 716
>gi|326492786|dbj|BAJ90249.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 248/614 (40%), Positives = 351/614 (57%), Gaps = 39/614 (6%)
Query: 180 EVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGM 239
E G+ + PW +E L+A R+++ + PT AE ++ EL RLRR
Sbjct: 114 EAGGDGNGRPAPWSAARDEGLKAALR------RQKKARQPTPAERLLDPAELDRLRRAAR 167
Query: 240 -----YLRERINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRT 293
+LR + KAG+T +V+ + W EL ++ E L M A EI+E ++
Sbjct: 168 GTGDGWLRAK----KAGVTDEVVEDVCRVWSGGQELAAVQVVEPLRRCMDRAREILEIKS 223
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVP------------HVSSTDGS 341
GGLV+W G V VYRG++Y Q D VP H S+ + S
Sbjct: 224 GGLVVWTKGDVHFVYRGSSYLENIKHRQ--KSIADIQRVPLEKCTAPGPQWKHESNAEPS 281
Query: 342 T-----ARSVDEKSEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
T A V + + + + +P+ T E E N LLDSLGPRF +WW LPVDA
Sbjct: 282 TNHNDDAHGVFRGIDPSLAVHAYEEPVEGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDA 341
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAIL 454
DLLP V G+KTPFR P G+R L + E+T LR+LAR LP HFALGRN QGLA A+L
Sbjct: 342 DLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVL 401
Query: 455 KLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVAS 514
KLWEKSL+AKIAVK GIQNTNN+ MA LK LTGGT++ RNK +++LYRGKDFLP V
Sbjct: 402 KLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQ 461
Query: 515 ALAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQKRWGREVSAE 572
++ E+E Q EE+ R +++ +G ++ G+ E+ + Q +E +
Sbjct: 462 SVIEQEARVYAQQVKEEEARLMVMDSLKMFAGLPSEESSVGSFREYQDFQLNHVQETTEN 521
Query: 573 EREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITD 632
+ EA K + + +K E +L + K R+ LAK+ S PS D+E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 633 EERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARL 692
EER +FR++GL+M + LG RG+FDGV+E +H HWK++E+VK+ITKQ + T+ L
Sbjct: 582 EERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQITYTSML 641
Query: 693 LEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALS 752
LE E+GG+LIA +++ A+I YRGKNY RP P NLLTK +AL+RSV +QR ++
Sbjct: 642 LEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSSPSNLLTKREALRRSVEVQRRGSMK 701
Query: 753 QHISDLENTIEQMK 766
++ + +IE ++
Sbjct: 702 YYVWERHKSIEDLQ 715
>gi|326499694|dbj|BAJ86158.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 247/614 (40%), Positives = 350/614 (57%), Gaps = 39/614 (6%)
Query: 180 EVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGM 239
E G+ + PW +E L+A R+++ + PT AE ++ EL RLRR
Sbjct: 114 EAGGDGNGRPAPWSAARDEGLKAALR------RQKKARQPTPAERLLDPAELDRLRRAAR 167
Query: 240 -----YLRERINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRT 293
+LR + KAG+T +V+ + W EL ++ E L M A EI+E ++
Sbjct: 168 GTGDGWLRAK----KAGVTDEVVEDVCRVWSGGQELAAVRVVEPLRRCMDRAREILEIKS 223
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVP------------HVSSTDGS 341
GGLV+W G V VYRG++Y Q D VP H S+ + S
Sbjct: 224 GGLVVWTKGDVHFVYRGSSYLENIKHRQ--KSIADIQRVPLEKCTAPGPQWKHESNAEPS 281
Query: 342 T-----ARSVDEKSEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
T A V + + + + +P+ T E E N LLDSLGPRF +WW LPVDA
Sbjct: 282 TNHNDDAHGVFRGIDPSLAVHAYEEPVEGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDA 341
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAIL 454
DLLP V G+KTPFR P G+R L + E+T LR+LAR LP HFALGRN QGLA A+L
Sbjct: 342 DLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVL 401
Query: 455 KLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVAS 514
KLWEKSL+AKIAVK GIQNTNN+ MA LK LTGGT++ RNK +++LYRGKDFLP V
Sbjct: 402 KLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQ 461
Query: 515 ALAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQKRWGREVSAE 572
++ E+E Q EE+ R +++ +G ++ G+ E+ + Q +E +
Sbjct: 462 SVIEQEARVYAQQVKEEEARLMVMDSLKMFAGLPSEESSVGSFREYQDFQLNHVQETTEN 521
Query: 573 EREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITD 632
+ EA K + + +K E +L + K R+ LAK+ S PS D+E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 633 EERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARL 692
EER +FR++GL+M + LG RG+FDGV+E +H HWK++E+VK+ITKQ + T+ L
Sbjct: 582 EERMIFRKIGLKMDEHVLLGRRGIFDGVIEEIHQHWKHKEIVKVITKQNQAYQITYTSML 641
Query: 693 LEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALS 752
LE E+GG+LIA +++ A+I YRGKNY RP P NL TK +AL+RSV +QR ++
Sbjct: 642 LEVETGGMLIATQKLTNSHAIILYRGKNYHRPTKSSPSNLRTKREALRRSVEVQRRGSMK 701
Query: 753 QHISDLENTIEQMK 766
++ + +IE ++
Sbjct: 702 YYVWERHKSIEDLQ 715
>gi|218201029|gb|EEC83456.1| hypothetical protein OsI_28955 [Oryza sativa Indica Group]
Length = 514
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/496 (44%), Positives = 308/496 (62%), Gaps = 10/496 (2%)
Query: 282 MKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGS 341
M A EI+E +TGGLV+W G + VYRG++Y + + + + L P S+ S
Sbjct: 1 MDRAREILEIKTGGLVVWTRGGIHFVYRGSSYLENAKQHRDFVNYNEEL-SPVTSNNPTS 59
Query: 342 TAR--SVDEK--SEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEWWGTGILPVDAD 395
+ S DE ++ KP+ T E E N LLDSLGPRF +WW LPVDAD
Sbjct: 60 QGKYWSKDETLTNDNDEADDKDDKPIKGTLYEREVNRLLDSLGPRFIDWWWNTPLPVDAD 119
Query: 396 LLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILK 455
LLP V +KTPFR P G+R L + E+T LR+ AR LP HF LGRN QGLA AILK
Sbjct: 120 LLPEVVPDFKTPFRQCPPGVRPTLADEELTYLRKHARPLPTHFVLGRNTKLQGLAAAILK 179
Query: 456 LWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASA 515
LWEKSL+AK+AVK GIQN+N++ MA LK LTGGT++ RNK YI++YRGKDFLP VA +
Sbjct: 180 LWEKSLIAKVAVKVGIQNSNHEQMARNLKRLTGGTVILRNKDYIIIYRGKDFLPGGVAES 239
Query: 516 LAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQKRWGREVSAEE 573
+ E+E Q EE+ R K ++ G + ++ GT E+ + R + E
Sbjct: 240 VIEQESQVHDQQAKEEEARLKMADSLQMIVGLSSERSYVGTFREYQDFHDSHARR-TTEN 298
Query: 574 REKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDE 633
++ EA K + + +K E +L++ K R+ ++LAK+ +S PS D D+E +T+E
Sbjct: 299 NFRIQLEAKKHRLEKELKDQEWRLSMLTKKIERSNQVLAKLHSSWSPSKKDGDRELLTEE 358
Query: 634 ERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLL 693
ER +FR++GL+M + LG RGVF+GV+E +H HWK++E+VK+ITKQ + T+ +L
Sbjct: 359 ERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQITYTSMML 418
Query: 694 EYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQ 753
E E+GG LIAIER A+I YRGKNYRRP P NLLTK +AL+RS+ +QR ++
Sbjct: 419 EVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNLLTKREALQRSIEVQRRGSMKY 478
Query: 754 HISDLENTIEQMKKEI 769
+ + +I+++K+E+
Sbjct: 479 FAQERKKSIDELKREL 494
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ +EE R R+ G+ + E + + + G+ + V+ +IH W+ E+V++ + A +
Sbjct: 355 LTEEERRIFRKIGLKMDEHVLLGRRGVFEGVIEEIHQHWKHKEVVKVITKQNQANQITYT 414
Query: 286 HEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPS-SKPQPL 323
++E TGG +I + +++YRG NY P+ S P L
Sbjct: 415 SMMLEVETGGTLIAIERFTTSHAIILYRGKNYRRPTKSAPSNL 457
>gi|296087258|emb|CBI33632.3| unnamed protein product [Vitis vinifera]
Length = 529
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/414 (50%), Positives = 277/414 (66%), Gaps = 17/414 (4%)
Query: 367 EAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTD 426
E E + LLD LGPRF +WW LPVDADLLP + G++ PFRL P RS+LT+ E+T
Sbjct: 71 EREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDDELTY 130
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
LR+LA +LP HF LGRNR QGLA AILKLWEKSL+ KIA+K GI NT N+ MA ELK L
Sbjct: 131 LRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANELKCL 190
Query: 487 TGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEAT----- 541
TGG LL RNKF+I+LYRGKDFLP VA+ + ERE K Q EE R K +E +
Sbjct: 191 TGGVLLLRNKFFIILYRGKDFLPCRVANLIVEREMEFKGCQIREEDARLKAIETSFVTDK 250
Query: 542 PSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVE-EASKAKHARLVKRIEHKLAVS 600
P T + GTL+EF + + R + E VE EA K + + +K+ E L +
Sbjct: 251 PLANT---STTGTLSEFQNIETEF-RGLKDGNTEIEVELEAEKERLEKELKKQERNLFIL 306
Query: 601 QAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
+ K R+ ++LAK+ ++ P+ D D+E IT+EER FR++G +M + L LG RGVFDGV
Sbjct: 307 KRKIERSAKVLAKLNSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGV 366
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
+E +H HWK+RE+VK+IT Q++ + V TA+LLE ESGG+L++I+++ +G A+I YRGKN
Sbjct: 367 IEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKN 426
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEAL-------SQHISDLENTIEQMKK 767
YRRPI L P+NLLTK +AL RS+ MQR +L Q ISDL+ + ++K
Sbjct: 427 YRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLADLQK 480
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRL-----KFHEVLAT 280
I +EE R+ G + + + + G+ V+ +H W+ E+V++ F +VL T
Sbjct: 336 ITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYT 395
Query: 281 DMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGP 316
+++E +GG+++ + G +++YRG NY P
Sbjct: 396 -----AKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRRP 430
>gi|242076096|ref|XP_002447984.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
gi|241939167|gb|EES12312.1| hypothetical protein SORBIDRAFT_06g019250 [Sorghum bicolor]
Length = 800
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/432 (49%), Positives = 281/432 (65%), Gaps = 24/432 (5%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG LPVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 388 EADKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 447
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 448 RLAHPLPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEIKDLTG 507
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ P + E
Sbjct: 508 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTI-YKPKPDIEE 555
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
P ++ + +VS RE+ V E + K +E +L+ + A+K R
Sbjct: 556 NMPTQD-----DSVLKVSNDVSVHIREEGTSVTEVRAKSLNTVAKNVEARLSQAIAEKER 610
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AE+LL ++E + S + +ETI+++ER M R+VGL+MK FL LG RGVFDG +ENMHL
Sbjct: 611 AEKLLEELEKASPLSKAEV-RETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHL 669
Query: 667 HWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS 726
HWKYRELVK+I K+ L VE AR LE ESGGIL+A+E+V KG A+I YRGKNY+RP
Sbjct: 670 HWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYQRPSK 729
Query: 727 LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVS---KDEEDGNIRCS 783
LRP+ LL+K ALKRSV QR ++L H+ L I+ +K ++ S KD D ++ S
Sbjct: 730 LRPKTLLSKRDALKRSVENQRCKSLKVHVLKLSKNIDYLKDQMNSSYYHKDMHDPSVN-S 788
Query: 784 GDLKQFDHVSVL 795
G L+Q D V++
Sbjct: 789 GTLQQHDEVNIF 800
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 71/94 (75%)
Query: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
EL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V A +M
Sbjct: 142 ELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNM 201
Query: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 202 RRTHEILERKTGGLVIWRSGSTIILYRGTNYKYP 235
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+G+R++ L +G G+ +G+V +H W+ E+VKL + + T +LE ++GG+
Sbjct: 156 IGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVWAMNMRRTHEILERKTGGL 215
Query: 701 LIAIERVPKGFALIFYRGKNYRRP 724
+I G +I YRG NY+ P
Sbjct: 216 VIW----RSGSTIILYRGTNYKYP 235
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 18/163 (11%)
Query: 175 NTVLREVEGEEDDSLLPWEREEE--ENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELR 232
NTV + VE ++ ER E+ E L E R TI ++E
Sbjct: 591 NTVAKNVEARLSQAIAEKERAEKLLEELEKASPLSKAEVRE-----------TISEDERY 639
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
LR+ G+ +++ + + + G+ + +H W+ ELV++ E D++ A +E
Sbjct: 640 MLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEYAARTLEAE 699
Query: 293 TGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
+GG+++ G ++VYRG NY PS +P+ L D L
Sbjct: 700 SGGILVAVEKVSKGHAIIVYRGKNYQRPSKLRPKTLLSKRDAL 742
>gi|357454755|ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355486706|gb|AES67909.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 880
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/521 (42%), Positives = 298/521 (57%), Gaps = 47/521 (9%)
Query: 292 RTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSS-----------TDG 340
+TGGLV+W +VVYRG NY S +D T ++P + T G
Sbjct: 299 KTGGLVVWSKKDALVVYRGCNYKLTSKGSTKID----TGYIPSRKTNSYEMNGVKLATIG 354
Query: 341 STARSVDEKS--EVPVRILDHSKPMTEE--------------EAECNSLLDSLGPRFQEW 384
R+ ++S E+P DH ++ + E EC+ LLD LGPRF +W
Sbjct: 355 DLYRAESDRSTSELPSWNADHKHSLSTDIHDMNYQPANGSLYERECDRLLDGLGPRFIDW 414
Query: 385 WGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNR 444
W LPVDADLLP V G++ P R+ P ++LT+ E+T RR++ LP HF LGRNR
Sbjct: 415 WMHKPLPVDADLLPEVVPGFEPPLRICPPHASAKLTDGELTYFRRISHPLPTHFVLGRNR 474
Query: 445 NHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
QGLA AILKLW KS +AKIA+K G+QNT+N+ MA ELK LTGG LL RNKFYI+LYRG
Sbjct: 475 GLQGLAAAILKLWHKSHIAKIAIKYGVQNTDNETMANELKRLTGGVLLLRNKFYILLYRG 534
Query: 505 KDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGET----EGQAPAGTLAEFYE 560
KDFLP VA + RE K Q EE R K ++A S + +G + +GTL EF
Sbjct: 535 KDFLPRRVADLVERRELELKSCQLDEEVARMKAIQAFSSIDEFPLPQGTSTSGTLTEFRN 594
Query: 561 AQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVP 620
Q + + EA + + +K + K + K R+ L+K+ A+ P
Sbjct: 595 IQNKLDEMKEVNVDLSIPLEAEIYRLEKELKEQQRKAFILNKKIERSTMELSKLNAAWKP 654
Query: 621 SGPDYDQETITDEERAMFRRVGLRMKAFLPLGI------------RGVFDGVVENMHLHW 668
SG D D E +TDEER FR++GL+M++ L LG RGVFDGV+E +H HW
Sbjct: 655 SGEDIDLEIMTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRGVFDGVLEGLHQHW 714
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
K+RE+ K+IT Q+ ++ V T++ LE ESGGIL++++++ +G+A+I YRGKNY RP
Sbjct: 715 KHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYSRPSEKI 774
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+NLLTK KAL+RS+ MQR H L+ Q +K I
Sbjct: 775 AKNLLTKRKALRRSLEMQRIGVSDFHSFSLKFFAHQREKTI 815
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
+PWER+E+ + + ++ K T A+LT++ L+RLR +R + V K
Sbjct: 140 MPWERDEKVDF----------LKVKKEKIVTAADLTLDKVLLQRLRSEAAIMRIWVKVKK 189
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290
AG+TQDV+ +I WR +EL +KF L +M A EIVE
Sbjct: 190 AGVTQDVVNQIKRTWRTNELAMVKFDIPLCQNMDRAREIVE 230
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKA------------GLTQDVMRKIHDKWRKDELVRLK 273
+ DEE R+ G+ +R + + KA G+ V+ +H W+ E+ ++
Sbjct: 664 MTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRGVFDGVLEGLHQHWKHREVAKVI 723
Query: 274 FHEVLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSSK 319
+ L + + + +ER +GG+++ + G +++YRG NY+ PS K
Sbjct: 724 TMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYSRPSEK 773
>gi|357167767|ref|XP_003581323.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Brachypodium distachyon]
Length = 1053
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/469 (46%), Positives = 299/469 (63%), Gaps = 35/469 (7%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG LPVDADLLP V G++ PFRLLP+G+ S+LT+ EMT LR
Sbjct: 392 EGDKLLDGLGPRFSGWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPSKLTDREMTILR 451
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLAR LP H+ALGR+ N QGLAV+++KLWE+ VAKIA+KRG +++L++EELK LTG
Sbjct: 452 RLARPLPYHYALGRSSNLQGLAVSMIKLWERCEVAKIAIKRGAYCIDSELVSEELKGLTG 511
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+ IV YRGKDFL P V+ A+ +R K K++ +T E+T + +
Sbjct: 512 GTLLSRDNKSIVFYRGKDFLSPAVSLAIEKRR---KHSNSTTGKLKPETEESTSTQD--- 565
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
A L +A G E E+ E + A++ +E +L+ + +K +AE
Sbjct: 566 ---ASELKMTSDASVN-GHECHEEKNEGETSLNTVAQN------VEIRLSQAIVEKEKAE 615
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+LL ++E + PS + +E I+DEER M R++GL+MK FL LG RGVFDG +ENMHLHW
Sbjct: 616 KLLEELEKASQPSKAE-TREHISDEERYMLRKIGLQMKPFLLLGRRGVFDGTIENMHLHW 674
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
KYRELVK+I K+ ++ VE AR LE +SGGIL+A+ERV KG A+I YRGKNY RP +LR
Sbjct: 675 KYRELVKIICKEHSMKDVEYAARTLESQSGGILVAVERVSKGHAIIMYRGKNYHRPSTLR 734
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGNI----RCSG 784
P++LL K ALKRSV QR ++L H+ +L I+ ++ ++ VS E+ I SG
Sbjct: 735 PKSLLNKRDALKRSVEYQRQKSLKLHVLNLSKNIDYLRGQM-VSFIHENKGINDLSNSSG 793
Query: 785 DLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESDDNDLSKNG 833
L+ E + V+ E FDSE +DS S + N L+K+G
Sbjct: 794 TLE-----------EKSEEVAPEGFDSEG-QDSTSSGTDGTLN-LTKSG 829
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AELT+ +ELRRL+ G+ LR+R+ V K G+T+ ++ IH++WR ELV+++ +V
Sbjct: 133 PSAAELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKIRCDDVS 192
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDG-DGDTLFVPHV 335
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P Q + DG L + V
Sbjct: 193 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYKYPYFHDQKSNSEDGKDLGIASV 250
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 617 SMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKL 676
+ VPS P + T+ +E + VG+R++ L +G GV +G+V +H W+ ELVK+
Sbjct: 127 AAVPSPPSAAELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNVELVKI 186
Query: 677 ITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRP 724
+ + T +LE ++GG++I G +I YRG NY+ P
Sbjct: 187 RCDDVSAMNMRRTHEILERKTGGLVIW----RSGSTIILYRGTNYKYP 230
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 175 NTVLREVEGEEDDSLLPWEREEE--ENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELR 232
NTV + VE +++ E+ E+ E L + ETR I DEE
Sbjct: 594 NTVAQNVEIRLSQAIVEKEKAEKLLEELEKASQPSKAETREH-----------ISDEERY 642
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
LR+ G+ ++ + + + G+ + +H W+ ELV++ E D++ A +E +
Sbjct: 643 MLRKIGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMKDVEYAARTLESQ 702
Query: 293 TGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
+GG+++ G +++YRG NY PS+ +P+ L D L
Sbjct: 703 SGGILVAVERVSKGHAIIMYRGKNYHRPSTLRPKSLLNKRDAL 745
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 399 PKVDGYKTP---FRLLPTGMRSRLTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVA 452
PK+D TP FR P R RL LR+ A + P A+GRN G+A
Sbjct: 906 PKLDEKCTPYLPFRTAPLSNRERLM------LRKQALKMKKRPV-LAIGRNNVITGVAKT 958
Query: 453 ILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
I ++K +A + +K T + + EL+ TG L+ R ++LYRG
Sbjct: 959 IQTHFKKHPLAIVNIKNRADGTPVQQLISELERATGSVLVSREPNKVILYRG 1010
>gi|302781424|ref|XP_002972486.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
gi|300159953|gb|EFJ26572.1| hypothetical protein SELMODRAFT_412905 [Selaginella moellendorffii]
Length = 795
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 253/658 (38%), Positives = 350/658 (53%), Gaps = 97/658 (14%)
Query: 190 LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPK 249
PW+RE + E P TR + K P LAELTI + ELRRL+R + + I V
Sbjct: 182 FPWQRE------SSSEAPTPVTRPQPPKLPCLAELTIPELELRRLQRIAIRVVNPIKVGY 235
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYR 309
G+T+ V++ IH +W+K E+V+++ + M+ WR G + YR
Sbjct: 236 LGVTKAVVQDIHRRWQKCEVVKIQPKNWWLSSMEN--------------WRNGHL---YR 278
Query: 310 GNNYAG---------------------PSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDE 348
G Y + K + D D D S ++ AR E
Sbjct: 279 GKGYFARVDNSMVANLKKYQRRKINLMEAIKIRDEDEDRD------YSQSEHGEARRDSE 332
Query: 349 KSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPF 408
K + LD E ++LL+ LGPR+ +W G +PVD DLLP V GYK P
Sbjct: 333 KGNIEDEYLD----------EIDALLEELGPRYDDWIGRKPVPVDGDLLPASVPGYKPPL 382
Query: 409 RLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVK 468
R+LP + L+N E+T LRRL + LP HF LGRNR QGLA AILKLW+KS + KI +K
Sbjct: 383 RMLPYRAKKNLSNMELTVLRRLVKPLPPHFVLGRNRGLQGLASAILKLWQKSELVKIGLK 442
Query: 469 RGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQD 528
RG+QNT N+LMAEEL+ LTGG LL R+KF+I LYRGKDFLP +VA+ L ERE +++
Sbjct: 443 RGVQNTRNQLMAEELERLTGGVLLSRDKFFITLYRGKDFLPTSVAAVLRERESNMRELLL 502
Query: 529 VEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHAR 588
E++VR G+ +G+L+E E +++W + S ++ E A A R
Sbjct: 503 KEDQVRIPA--QIGDGQNRTTPVSGSLSESMEMRRQWEAQRSEKDDEMDRNSAVVALKVR 560
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
KR+E KLA + +KK RA+ + K+E S++ S D+ETIT+EER MF+++GLRM AF
Sbjct: 561 EQKRLEAKLAAAISKKRRADLQIVKLERSLLLSEHPRDRETITEEERYMFKKLGLRMDAF 620
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIE--- 705
L +G RGVFDGV+ENMHLHWK+RELVKLI K+K A + A++LE ESGGIL+ +
Sbjct: 621 LLIGRRGVFDGVIENMHLHWKHRELVKLILKEKDKAIALEVAKMLEIESGGILVGVALQL 680
Query: 706 RVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
+ K LI K+Y + L K+ AL + H AL + I
Sbjct: 681 HIEKLEELIMKLRKDY---------DYLLKSNALPDTP----HSALYKAIDS-------- 719
Query: 766 KKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFE 823
+D+ DG + D K+ H ++D+ SD+ DSE D S E
Sbjct: 720 ----KYQEDDIDGELLA--DRKKLHH-----DDDDEMAYSDDLLDSEISSDGSESEAE 766
>gi|326497411|dbj|BAK05795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 204/423 (48%), Positives = 270/423 (63%), Gaps = 19/423 (4%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF EWWG LPVDADLLP V G++ PFRLLP+G+ +LT+ EMT LR
Sbjct: 402 EDDKLLDGLGPRFSEWWGYDPLPVDADLLPAIVPGFRRPFRLLPSGVPPKLTDREMTILR 461
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLAR LP H+ALGR+ N QGLA +I+KLWE+ VAKIA+KRG +++L++EELK LTG
Sbjct: 462 RLARPLPYHYALGRSSNLQGLAASIIKLWERCEVAKIAMKRGPYCIDSELVSEELKGLTG 521
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+ IVLYRGKDFLP V+ A+ +R + ++ P E E
Sbjct: 522 GTLLSRDNESIVLYRGKDFLPQAVSLAIEKRRK------------HDNSMINKPKPEIEE 569
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
P +E A E E V E + + +E +L+ + +K +AE
Sbjct: 570 SIPTQDASELKIANDASVHGHECHEGETSVSEYRTESLNTVAQNMETRLSQALTEKEKAE 629
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+LL ++E + S + +E I++EER M R+VGL+MK FL LG RGVFDG +ENMHLHW
Sbjct: 630 KLLEELEKASRSSKAE-TREVISEEERYMLRKVGLQMKPFLLLGRRGVFDGTIENMHLHW 688
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
KYRELVK+I K+ ++ V AR LE ESGGIL+A+ERV KG A+I YRGKNY+RP SLR
Sbjct: 689 KYRELVKIICKEHSMEDVTYAARTLEAESGGILVAVERVSKGHAIIMYRGKNYQRPSSLR 748
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDG------NIRC 782
P++LL K ALKRSV +QR ++L H+ +L I+ ++ ++ S E G N R
Sbjct: 749 PKSLLNKKDALKRSVELQRRKSLKLHVLNLSKNIDYLRGQLMNSGHENKGMHDLCDNSRT 808
Query: 783 SGD 785
SG+
Sbjct: 809 SGE 811
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 71/94 (75%)
Query: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
ELT+ +ELRRL+ G+ LR+R+ V K G+T+ ++ IH++WR ELV+++ ++ A +M
Sbjct: 139 ELTLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNM 198
Query: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
+ HE++ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 199 RRTHEVLERKTGGLVIWRSGSTIILYRGTNYKYP 232
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 629 TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVED 688
T+ +E + VG+R++ L +G GV +G+V +H W+ ELVK+ + +
Sbjct: 141 TLPRDELRRLQGVGIRLRKRLKVGKPGVTEGIVNGIHERWRNAELVKIRCDDISAMNMRR 200
Query: 689 TARLLEYESGGILIAIERVPKGFALIFYRGKNYRRP 724
T +LE ++GG++I G +I YRG NY+ P
Sbjct: 201 THEVLERKTGGLVIW----RSGSTIILYRGTNYKYP 232
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 175 NTVLREVEGEEDDSLLPWEREEE--ENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELR 232
NTV + +E +L E+ E+ E L ETR I +EE
Sbjct: 608 NTVAQNMETRLSQALTEKEKAEKLLEELEKASRSSKAETRE-----------VISEEERY 656
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
LR+ G+ ++ + + + G+ + +H W+ ELV++ E D+ A +E
Sbjct: 657 MLRKVGLQMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHSMEDVTYAARTLEAE 716
Query: 293 TGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
+GG+++ G +++YRG NY PSS +P+ L D L
Sbjct: 717 SGGILVAVERVSKGHAIIMYRGKNYQRPSSLRPKSLLNKKDAL 759
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 339 DGSTARSVDEKSEVPVR----ILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
+GS S D + E R + HS +EE+++ +L +LGP
Sbjct: 875 EGSNTASSDNQIEYQNRLSFPVACHSDNGSEEDSK---ILKTLGP-------------SQ 918
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAV 451
L P +D TP LP+ + L+N E LR+ A + P A+GRN G+A
Sbjct: 919 ALEEPILDQKHTPR--LPSKA-APLSNRERLVLRKQALQMKKRPV-LAIGRNNVITGVAK 974
Query: 452 AILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
I ++K +A + +K T + + EL+ TG L+ R ++LYRG
Sbjct: 975 TIRTHFKKHPLAVVNIKNRADGTPVQQLISELEEATGSVLVSREPNKVILYRG 1027
>gi|116310121|emb|CAH67138.1| OSIGBa0130P02.2 [Oryza sativa Indica Group]
Length = 1048
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/401 (48%), Positives = 267/401 (66%), Gaps = 10/401 (2%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF +WWG LPVDADLLP V GY+ PFRLLP+G+ RLT+ EMT LR
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYRRPFRLLPSGVPPRLTDREMTILR 424
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLAR LP H+ALGR+ N QGLA +++KLWE+ VAK+A+KRG +N ++ L++E+LK LTG
Sbjct: 425 RLARPLPYHYALGRSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 484
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+ IV YRGKDFLP V+ A+ +R + + K+ TP ++
Sbjct: 485 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKS---TPQNSSKL 541
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
+ + +E ++ ++ E V + + +E +L+ + A+K + E
Sbjct: 542 KMATDVSLDGHECYEKKHKD------ETAVSDNRAESLNVFTQNVEARLSQAIAEKEKTE 595
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+L+ ++E S PS + +E I++EER M R+VGL+MK+FL LG RGVFDG VENMHLHW
Sbjct: 596 KLIEELEMSSEPSRAE-TREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHW 654
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
KYRELVK+I K+ + VE AR LE ESGGIL+A+ERV K A+I YRGKNY+RP +LR
Sbjct: 655 KYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLR 714
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
P++LL K ALKRSV QR+++L H+ +L I+ +K ++
Sbjct: 715 PKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 755
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Query: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
EL + +ELRRL+ G+ LR R+ V KAG+T+ ++ IH++WR ELV+++ +V A +M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTD 339
K HEI+ER+TGGLVIWR+GS +++YRG +Y P + + + D D H SS D
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFQDREMKNDMDE-SSEHTSSDD 253
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 642 GLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGIL 701
G+R++ L +G GV +G+V +H W+ ELVK+ + ++ T +LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 702 IAIERVPKGFALIFYRGKNYRRP 724
I G +I YRG +Y+ P
Sbjct: 213 IW----RSGSTIILYRGTDYKYP 231
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 219 PTLAEL--TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
P+ AE I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ E
Sbjct: 607 PSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKE 666
Query: 277 VLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
D++ A +E +GG+++ +++YRG NY PS+ +P+ L D L
Sbjct: 667 HNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDAL 725
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 419 LTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
L+N E LR+ A + P A+GRN G+A AI ++K +A + +K T
Sbjct: 917 LSNRERLMLRKQALKMKKRPV-LAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 975
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRG------KDFLPPNVASALAEREQCAKQI 526
+ + EL+ TG L+ R ++LYRG ++ L N ++ E+E + Q+
Sbjct: 976 IQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQL 1032
>gi|110742047|dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
Length = 717
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 258/691 (37%), Positives = 375/691 (54%), Gaps = 65/691 (9%)
Query: 25 PSLNHLPFSSSSRKTPSFQLLKPFSSLR--------TNQNPRTDSQNQQFPKPRSP---- 72
PSL+ P + + + SFQ F LR + + S+N Q R
Sbjct: 5 PSLHFCPTTVTKKFVYSFQSSFCFRFLRYSSSISLGSCKGVTFSSRNDQIASRRFSFSRD 64
Query: 73 STSAPWLNNWSR------PKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGRNAI 126
+ WL NW+R PKPP + GR E + D+ R D + +
Sbjct: 65 CNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEIVSGDDNRSRDGDG-----STM 119
Query: 127 ERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVR-PNT--------V 177
E+IV +L+ G + + + E+E I + +ED+ E + PNT +
Sbjct: 120 EKIVEKLKKYGYMEEVQNKEIEQERRIEKGS-----VEDIFYVEEGKLPNTRGGFTEESL 174
Query: 178 L--REVEGEEDDSLLPWER---EEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELR 232
L V G D PWE+ +E++ L A E ++ +LAE+T+ + ELR
Sbjct: 175 LGGENVIGSNGDVGFPWEKMSAKEKKELEA-------EWTAKKENRYSLAEMTLPESELR 227
Query: 233 RLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERR 292
RLR ++ + G+TQ + I +KW+ E+VRLK A +M+ HEI+E++
Sbjct: 228 RLRNLTFRTASKMRIRGGGVTQVAVDAIKEKWKSAEIVRLKIEGASALNMRKMHEILEKK 287
Query: 293 TGGLVIWRAGSVMVVYRGNNYAGPSSK----------PQPLDGDGDTLFVPHVSSTDGST 342
TGGLVIWR+G+ + +YRG +Y PS K P+ + + D V +D
Sbjct: 288 TGGLVIWRSGTSISLYRGVSYELPSGKWNKQRREETPPEAVIENHDET-TTMVDKSDEKV 346
Query: 343 ARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVD 402
E+ V D + P+ E E E + LLD LGPRF +W G LPVDADLLP +
Sbjct: 347 HLPQLEQETTSVEKKDQTSPVVEYEDELDELLDDLGPRFMDWPGDNPLPVDADLLPGAIP 406
Query: 403 GYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLV 462
Y+ PFR+LP G+RS L E T LRRLARS+P HFALGR+R QGLA A+++LWEKS++
Sbjct: 407 DYEPPFRVLPYGVRSSLGPKEATALRRLARSIPPHFALGRSRQLQGLATAMVRLWEKSML 466
Query: 463 AKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQC 522
AKIA+KRG+Q+T ++ MAE+LK LTGG +L RNK ++V YRGK+FL VA AL E+E+
Sbjct: 467 AKIAIKRGVQSTTSERMAEDLKKLTGGIMLSRNKDFLVFYRGKNFLSREVADALVEQERF 526
Query: 523 AKQIQDVEEKVRSKTLEA--TPSGETEGQ-APAGTLAEFYEAQKRWGREVSAEEREKMV- 578
+ +QD EE+ R + A PS E + AGTL E +A +WG+ + ++ V
Sbjct: 527 VRTLQDEEEQARLRGSSALIVPSTEPANKLVSAGTLGETLDATGKWGKNLDDDDHSDEVK 586
Query: 579 EEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMF 638
+E +H LV+++E KLA ++ K L+AER LAK+E + P+ D E+ITDEER MF
Sbjct: 587 QEVEILRHENLVRKLERKLAFAERKLLKAERGLAKVEVCLKPAEQREDPESITDEERFMF 646
Query: 639 RRVGLRMKAFLPLGIRGVFDGVVENMHLHWK 669
R++GL+MKAFL LG +F + ++ H+K
Sbjct: 647 RKLGLKMKAFLLLGFAPIFPDICYHL-THYK 676
>gi|154986383|gb|ABS89145.1| CFM2 [Zea mays]
Length = 942
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 277/427 (64%), Gaps = 24/427 (5%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG +PVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 286 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 345
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA +LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 346 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 405
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ G E
Sbjct: 406 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTIYKAKPGIEE- 453
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
++ ++ + +VS RE+ V E + K +E +L+ + A+K +
Sbjct: 454 -----SMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTVAKDVETRLSQAIAEKAK 508
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AE+L+ ++E + P +ETI+++ER M R+VGL+MK FL LG RGVFDG +ENMHL
Sbjct: 509 AEKLIEELEKAS-PLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHL 567
Query: 667 HWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS 726
HWKYRELVK+I K+ L VE AR LE ESGGIL+A+E+V KG A+I YRGKNY+RP
Sbjct: 568 HWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK 627
Query: 727 LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVS---KDEEDGNIRCS 783
LRP+ LL+K ALKRS+ QR ++L H+ L I+ ++ ++ S KD D ++ S
Sbjct: 628 LRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLRDQMNSSYYHKDMHDPSVN-S 686
Query: 784 GDLKQFD 790
L+Q D
Sbjct: 687 VTLQQQD 693
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 39 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 98
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 99 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYP 136
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 615 EASMVPSGPDYDQE-TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+AS PS P E + +E + +G+R++ L +G G+ +G+V +H W+ E+
Sbjct: 30 DASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEV 89
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI---SLRPR 730
VKL + + T +LE ++GG++I G +I YRG NY P S R
Sbjct: 90 VKLRCEDVWAMNMRRTHEILERKTGGLVIW----RSGSTIILYRGTNYTYPYFHHSERVD 145
Query: 731 NLLTKAKALKRSVAMQRHEALSQHISDLENTIE 763
+ L K + +S + E SQH S E + E
Sbjct: 146 SFLDKESS-DQSNSGDEDETSSQHGSSHEKSSE 177
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
TI ++E LR+ G+ +++ + + + G+ + +H W+ ELV++ E D++
Sbjct: 530 TISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEY 589
Query: 285 AHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
A +E +GG+++ G ++VYRG NY PS +P+ L D L
Sbjct: 590 AARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSKLRPKTLLSKRDAL 640
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 399 PKVDGYK---TPFRLLPTGMRSRLTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVA 452
PK+D +P R P L+N E LR+ A + P ++GRN G+A
Sbjct: 795 PKLDAESLSVSPLRAAP------LSNQERLVLRKQALQMKKRPV-LSIGRNNAITGVAKT 847
Query: 453 ILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
I ++K +A + +K T + + EL+ TG L+ R ++LYRG
Sbjct: 848 IKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 899
>gi|413918579|gb|AFW58511.1| CFM2 [Zea mays]
Length = 1039
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 204/427 (47%), Positives = 277/427 (64%), Gaps = 24/427 (5%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG +PVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 383 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 442
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA +LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 443 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 502
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ G E
Sbjct: 503 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTIYKAKPGIEE- 550
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
++ ++ + +VS RE+ V E + K +E +L+ + A+K +
Sbjct: 551 -----SMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTVAKDVETRLSQAIAEKAK 605
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AE+L+ ++E + P +ETI+++ER M R+VGL+MK FL LG RGVFDG +ENMHL
Sbjct: 606 AEKLIEELEKAS-PLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHL 664
Query: 667 HWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS 726
HWKYRELVK+I K+ L VE AR LE ESGGIL+A+E+V KG A+I YRGKNY+RP
Sbjct: 665 HWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK 724
Query: 727 LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVS---KDEEDGNIRCS 783
LRP+ LL+K ALKRS+ QR ++L H+ L I+ ++ ++ S KD D ++ S
Sbjct: 725 LRPKTLLSKRDALKRSLENQRCKSLKVHVLKLSKNIDYLRDQMNSSYYHKDMHDPSVN-S 783
Query: 784 GDLKQFD 790
L+Q D
Sbjct: 784 VTLQQQD 790
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 136 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 195
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 196 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYP 233
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 615 EASMVPSGPDYDQE-TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+AS PS P E + +E + +G+R++ L +G G+ +G+V +H W+ E+
Sbjct: 127 DASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEV 186
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRP 724
VKL + + T +LE ++GG++I G +I YRG NY P
Sbjct: 187 VKLRCEDVWAMNMRRTHEILERKTGGLVIW----RSGSTIILYRGTNYTYP 233
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
TI ++E LR+ G+ +++ + + + G+ + +H W+ ELV++ E D++
Sbjct: 627 TISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEY 686
Query: 285 AHEIVERRTGGLVIW----RAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
A +E +GG+++ G ++VYRG NY PS +P+ L D L
Sbjct: 687 AARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSKLRPKTLLSKRDAL 737
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 399 PKVDGYK---TPFRLLPTGMRSRLTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVA 452
PK+D +P R P L+N E LR+ A + P ++GRN G+A
Sbjct: 892 PKLDAESLSVSPLRAAP------LSNQERLVLRKQALQMKKRPV-LSIGRNNAITGVAKT 944
Query: 453 ILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRG 504
I ++K +A + +K T + + EL+ TG L+ R ++LYRG
Sbjct: 945 IKTHFKKHPLAIVNIKNRADGTPIQQLISELEEATGSVLVSRETNKVILYRG 996
>gi|154986387|gb|ABS89147.1| CFM2 alternative polyadenylation form 2 [Zea mays]
Length = 783
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/381 (50%), Positives = 254/381 (66%), Gaps = 20/381 (5%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG +PVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 376 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 435
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA +LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 436 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 495
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ G E
Sbjct: 496 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTIYKAKPGIEE- 543
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
++ ++ + +VS RE+ V E + K +E +L+ + A+K +
Sbjct: 544 -----SMPTQNDSVLKVSSDVSVHVREEGTSVTENRAGSLNTVAKDVETRLSQAIAEKAK 598
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHL 666
AE+L+ ++E + P +ETI+++ER M R+VGL+MK FL LG RGVFDG +ENMHL
Sbjct: 599 AEKLIEELEKAS-PLSKAEVRETISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHL 657
Query: 667 HWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS 726
HWKYRELVK+I K+ L VE AR LE ESGGIL+A+E+V KG A+I YRGKNY+RP
Sbjct: 658 HWKYRELVKIICKEHRLEDVEYAARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSK 717
Query: 727 LRPRNLLTKAKALKRSVAMQR 747
LRP+ LL+K ALKRS+ QR
Sbjct: 718 LRPKTLLSKRDALKRSLENQR 738
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 129 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 188
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 189 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYP 226
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 615 EASMVPSGPDYDQE-TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+AS PS P E + +E + +G+R++ L +G G+ +G+V +H W+ E+
Sbjct: 120 DASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEV 179
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRP 724
VKL + + T +LE ++GG++I G +I YRG NY P
Sbjct: 180 VKLRCEDVWAMNMRRTHEILERKTGGLVIW----RSGSTIILYRGTNYTYP 226
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
TI ++E LR+ G+ +++ + + + G+ + +H W+ ELV++ E D++
Sbjct: 620 TISEDERYMLRKVGLKMKQFLLLGRRGVFDGTIENMHLHWKYRELVKIICKEHRLEDVEY 679
Query: 285 AHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
A +E +GG+++ G ++VYRG NY PS +P+ L D L
Sbjct: 680 AARTLEAESGGILVAVEKVSKGHAIIVYRGKNYKRPSKLRPKTLLSKRDAL 730
>gi|125590660|gb|EAZ31010.1| hypothetical protein OsJ_15093 [Oryza sativa Japonica Group]
Length = 818
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 240/404 (59%), Gaps = 52/404 (12%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF +WWG LPVDADLLP V GY+
Sbjct: 171 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 207
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
R+ N QGLA +++KLWE+ VAK+A+KRG +N ++ L++E+LK LTG
Sbjct: 208 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 254
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL---EATPSGE 545
GTLL R+ IV YRGKDFLP V+ A+ +R + + + L ++TP
Sbjct: 255 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNST------ISNPKLNFDKSTPQNS 308
Query: 546 TEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
++ + + +E ++ ++ E V + + +E +L+ + A+K
Sbjct: 309 SKLKMATDVSLDGHECYEKKHKD------ETAVSDNRAESLNVFAQNVEARLSQAIAEKE 362
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
+ E+L+ ++E S PS + +E I++EER M R+VGL+MK+FL LG RGVFDG VENMH
Sbjct: 363 KTEKLIEELEMSSEPSRAE-TREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMH 421
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWKYRELVK+I K+ + VE AR LE ESGGIL+A+ERV K A+I YRGKNY+RP
Sbjct: 422 LHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPS 481
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+LRP++LL K ALKRSV QR+++L H+ +L I+ +K ++
Sbjct: 482 TLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 281 DMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTD 339
+MK HEI+ER+TGGLVIWR+GS +++YRG +Y P + + D D H SS D
Sbjct: 2 NMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDE-SSEHTSSDD 59
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 219 PTLAEL--TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
P+ AE I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ E
Sbjct: 377 PSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKE 436
Query: 277 VLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
D++ A +E +GG+++ +++YRG NY PS+ +P+ L D L
Sbjct: 437 HNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDAL 495
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 419 LTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
L+N E LR+ A + P A+GRN G+A AI ++K +A + +K T
Sbjct: 687 LSNRERLMLRKQALKMKKRPV-LAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 745
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRG------KDFLPPNVASALAEREQCAKQI 526
+ + EL+ TG L+ R ++LYRG ++ L N ++ E+E + Q+
Sbjct: 746 IQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQL 802
>gi|218194999|gb|EEC77426.1| hypothetical protein OsI_16218 [Oryza sativa Indica Group]
Length = 818
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/404 (41%), Positives = 240/404 (59%), Gaps = 52/404 (12%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF +WWG LPVDADLLP V GY+
Sbjct: 171 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 207
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
R+ N QGLA +++KLWE+ VAK+A+KRG +N ++ L++E+LK LTG
Sbjct: 208 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 254
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL---EATPSGE 545
GTLL R+ IV YRGKDFLP V+ A+ +R + + + L ++TP
Sbjct: 255 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNST------ISNPKLNFDKSTPQNS 308
Query: 546 TEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKL 605
++ + + +E ++ ++ E V + + +E +L+ + A+K
Sbjct: 309 SKLKMATDVSLDGHECYEKKHKD------ETAVSDNRAESLNVFTQNVEARLSQAIAEKE 362
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
+ E+L+ ++E S PS + +E I++EER M R+VGL+MK+FL LG RGVFDG VENMH
Sbjct: 363 KTEKLIEELEMSSEPSRAE-TREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMH 421
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWKYRELVK+I K+ + VE AR LE ESGGIL+A+ERV K A+I YRGKNY+RP
Sbjct: 422 LHWKYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPS 481
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+LRP++LL K ALKRSV QR+++L H+ +L I+ +K ++
Sbjct: 482 TLRPKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 525
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 281 DMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTD 339
+MK HEI+ER+TGGLVIWR+GS +++YRG +Y P + + D D H SS D
Sbjct: 2 NMKRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDE-SSEHTSSDD 59
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 219 PTLAEL--TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
P+ AE I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ E
Sbjct: 377 PSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKE 436
Query: 277 VLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
D++ A +E +GG+++ +++YRG NY PS+ +P+ L D L
Sbjct: 437 HNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDAL 495
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 419 LTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
L+N E LR+ A + P A+GRN G+A AI ++K +A + +K T
Sbjct: 687 LSNRERLMLRKQALKMKKRPV-LAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 745
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRG------KDFLPPNVASALAEREQCAKQI 526
+ + EL+ TG L+ R ++LYRG ++ L N ++ E+E + Q+
Sbjct: 746 IQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQL 802
>gi|21741981|emb|CAD41031.1| OSJNBa0060P14.12 [Oryza sativa Japonica Group]
gi|32492164|emb|CAE04823.1| OSJNBb0048E02.3 [Oryza sativa Japonica Group]
Length = 1012
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 238/401 (59%), Gaps = 46/401 (11%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF +WWG LPVDADLLP V GY+
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 401
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
R+ N QGLA +++KLWE+ VAK+A+KRG +N ++ L++E+LK LTG
Sbjct: 402 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 448
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+ IV YRGKDFLP V+ A+ +R + + K+ TP ++
Sbjct: 449 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKS---TPQNSSKL 505
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
+ + +E ++ ++ E V + + +E +L+ + A+K + E
Sbjct: 506 KMATDVSLDGHECYEKKHKD------ETAVSDNRAESLNVFAQNVEARLSQAIAEKEKTE 559
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+L+ ++E S PS + +E I++EER M R+VGL+MK+FL LG RGVFDG VENMHLHW
Sbjct: 560 KLIEELEMSSEPSRAE-TREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHW 618
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
KYRELVK+I K+ + VE AR LE ESGGIL+A+ERV K A+I YRGKNY+RP +LR
Sbjct: 619 KYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLR 678
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
P++LL K ALKRSV QR+++L H+ +L I+ +K ++
Sbjct: 679 PKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
EL + +ELRRL+ G+ LR R+ V KAG+T+ ++ IH++WR ELV+++ +V A +M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTD 339
K HEI+ER+TGGLVIWR+GS +++YRG +Y P + + D D H SS D
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDE-SSEHTSSDD 253
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 642 GLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGIL 701
G+R++ L +G GV +G+V +H W+ ELVK+ + ++ T +LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 702 IAIERVPKGFALIFYRGKNYRRP 724
I G +I YRG +Y+ P
Sbjct: 213 IW----RSGSTIILYRGTDYKYP 231
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 219 PTLAEL--TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
P+ AE I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ E
Sbjct: 571 PSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKE 630
Query: 277 VLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
D++ A +E +GG+++ +++YRG NY PS+ +P+ L D L
Sbjct: 631 HNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDAL 689
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 419 LTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
L+N E LR+ A + P A+GRN G+A AI ++K +A + +K T
Sbjct: 881 LSNRERLMLRKQALKMKKRPV-LAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 939
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRG------KDFLPPNVASALAEREQCAKQI 526
+ + EL+ TG L+ R ++LYRG ++ L N ++ E+E + Q+
Sbjct: 940 IQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQL 996
>gi|297602873|ref|NP_001053020.2| Os04g0464800 [Oryza sativa Japonica Group]
gi|255675534|dbj|BAF14934.2| Os04g0464800 [Oryza sativa Japonica Group]
Length = 1042
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 238/401 (59%), Gaps = 46/401 (11%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF +WWG LPVDADLLP V GY+
Sbjct: 365 EADKLLDGLGPRFSDWWGYDPLPVDADLLPAIVPGYR----------------------- 401
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
R+ N QGLA +++KLWE+ VAK+A+KRG +N ++ L++E+LK LTG
Sbjct: 402 -------------RSSNLQGLAASMIKLWERCEVAKVAIKRGAENIDSDLISEKLKGLTG 448
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+ IV YRGKDFLP V+ A+ +R + + K+ TP ++
Sbjct: 449 GTLLSRDNESIVFYRGKDFLPTAVSLAIEKRRKYGNSTISNPKLNFDKS---TPQNSSKL 505
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAE 608
+ + +E ++ ++ E V + + +E +L+ + A+K + E
Sbjct: 506 KMATDVSLDGHECYEKKHKD------ETAVSDNRAESLNVFAQNVEARLSQAIAEKEKTE 559
Query: 609 RLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHW 668
+L+ ++E S PS + +E I++EER M R+VGL+MK+FL LG RGVFDG VENMHLHW
Sbjct: 560 KLIEELEMSSEPSRAE-TREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHW 618
Query: 669 KYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLR 728
KYRELVK+I K+ + VE AR LE ESGGIL+A+ERV K A+I YRGKNY+RP +LR
Sbjct: 619 KYRELVKIICKEHNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLR 678
Query: 729 PRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
P++LL K ALKRSV QR+++L H+ +L I+ +K ++
Sbjct: 679 PKSLLNKKDALKRSVEYQRYKSLKLHVLNLSKNIDYLKDQM 719
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 223 ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDM 282
EL + +ELRRL+ G+ LR R+ V KAG+T+ ++ IH++WR ELV+++ +V A +M
Sbjct: 138 ELALPRDELRRLQGAGIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNM 197
Query: 283 KTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTD 339
K HEI+ER+TGGLVIWR+GS +++YRG +Y P + + D D H SS D
Sbjct: 198 KRTHEILERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDE-SSEHTSSDD 253
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 642 GLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGIL 701
G+R++ L +G GV +G+V +H W+ ELVK+ + ++ T +LE ++GG++
Sbjct: 153 GIRLRNRLKVGKAGVTEGIVNGIHERWRNAELVKIRCDDVSAMNMKRTHEILERKTGGLV 212
Query: 702 IAIERVPKGFALIFYRGKNYRRP 724
I G +I YRG +Y+ P
Sbjct: 213 IW----RSGSTIILYRGTDYKYP 231
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 219 PTLAEL--TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHE 276
P+ AE I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ E
Sbjct: 571 PSRAETREVISEEERYMLRKVGLKMKSFLLLGRRGVFDGTVENMHLHWKYRELVKIICKE 630
Query: 277 VLATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPLDGDGDTL 330
D++ A +E +GG+++ +++YRG NY PS+ +P+ L D L
Sbjct: 631 HNIKDVEYAARTLEAESGGILVAVERVSKAHAIIIYRGKNYQRPSTLRPKSLLNKKDAL 689
Score = 39.3 bits (90), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 419 LTNAEMTDLRRLARSL---PCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTN 475
L+N E LR+ A + P A+GRN G+A AI ++K +A + +K T
Sbjct: 881 LSNRERLMLRKQALKMKKRPV-LAVGRNNVITGVAKAIKTHFKKHPLAIVNIKNRADGTP 939
Query: 476 NKLMAEELKSLTGGTLLQRNKFYIVLYRG------KDFLPPNVASALAEREQCAKQI 526
+ + EL+ TG L+ R ++LYRG ++ L N ++ E+E + Q+
Sbjct: 940 IQQLISELEEATGSVLVSREPNKVILYRGWGADVAQNSLSGNNSTEQVEKEVISPQL 996
>gi|168014862|ref|XP_001759970.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688720|gb|EDQ75095.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 512
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 196/510 (38%), Positives = 271/510 (53%), Gaps = 34/510 (6%)
Query: 288 IVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVD 347
+++R TGG+VIWR G +V+YRG +Y + L + + + + +R +
Sbjct: 1 LLQRLTGGIVIWREGPAVVIYRGKDYVPVWMRKMDLREEAYRKRLQLLDCDEEDESRQLM 60
Query: 348 EKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTP 407
E+ D M +E +E L+D LGP+F W G PVD DLL + +P
Sbjct: 61 EEGTS----YDCQTNMIQE-SEIEDLMDDLGPQFVGWIEGGRAPVDGDLLVN--SNFNSP 113
Query: 408 FRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAV 467
FR LP G+R RLTN EMT++R LA+ LP HF LG+ R +GLA AI+KLWEKS VAKIA+
Sbjct: 114 FRRLPYGVRPRLTNFEMTEMRHLAKKLPPHFVLGQCRGLEGLASAIVKLWEKSEVAKIAM 173
Query: 468 KRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQ 527
KRG+ N MA EL LTGG L+ RN YI LYRG FLP V L E++ A+ +
Sbjct: 174 KRGVSRIVNDRMASELIRLTGGDLIARNMSYIALYRGNSFLPAIVKGTLKEKDHIARTLL 233
Query: 528 DVEEKVRSKTLEATPSGETEG----QAPAGTLAEF------YEAQKRWGREVSAEEREKM 577
+ EE+ R + A + Q +++ F + + ++G + + K+
Sbjct: 234 EDEERNRLAAILARKAARDLARQRMQRILNSVSSFSYNFCIHRSSLKFGLFLLSSIFMKI 293
Query: 578 VEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 637
R K I L V K AER L + M P +E +T+EE
Sbjct: 294 SAYMVIDIEIRF-KPIRIGLNVVSQKISSAERELLNLNLKMKPKDMHASKEDVTEEEMYT 352
Query: 638 FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAY-----VEDTARL 692
R++GLRMK +L LG R VF GV+ENMHLHWK+R+LVK+I K+ Y +E+ AR+
Sbjct: 353 LRKIGLRMKPYLLLGRREVFSGVIENMHLHWKWRQLVKIIVKKSYFMYRERDDIENIARM 412
Query: 693 LEYESGGILIAIERVPKGFALIFYRGKNYRRP---IS-------LRPRNLLTKAKALKRS 742
LE ESGG+L+ I +P G A+I YRGKNY+RP IS LRP LLTK +A +R
Sbjct: 413 LEIESGGVLVGICTIPVGEAIIVYRGKNYQRPNDGISPQGHPDGLRPCGLLTKKQAWERF 472
Query: 743 VAMQRHEALSQHISDLENTIEQMKKEIGVS 772
+R DL N E + + + V
Sbjct: 473 NQKRRKRVYFSLSLDL-NMFEILSRIVCVC 501
>gi|326492864|dbj|BAJ90288.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 630
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 195/501 (38%), Positives = 272/501 (54%), Gaps = 39/501 (7%)
Query: 180 EVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGM 239
E G+ + PW +E L+A R+++ + PT AE ++ EL RLRR
Sbjct: 114 EAGGDGNGRPAPWSAARDEGLKAALR------RQKKARQPTPAERLLDPAELDRLRRAAR 167
Query: 240 -----YLRERINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRT 293
+LR + KAG+T +V+ + W EL ++ E L M A EI+E ++
Sbjct: 168 GTGDGWLRAK----KAGVTDEVVEDVCRVWSGGQELAAVRVVEPLRRCMDRAREILEIKS 223
Query: 294 GGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVP------------HVSSTDGS 341
GGLV+W G V VYRG++Y Q D VP H S+ + S
Sbjct: 224 GGLVVWTKGDVHFVYRGSSYLENIKHRQ--KSIADIQRVPLEKCTAPGPQWKHESNAEPS 281
Query: 342 T-----ARSVDEKSEVPVRILDHSKPM--TEEEAECNSLLDSLGPRFQEWWGTGILPVDA 394
T A V + + + + +P+ T E E N LLDSLGPRF +WW LPVDA
Sbjct: 282 TNHNDDAHGVFRGIDPSLAVHAYEEPVEGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDA 341
Query: 395 DLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAIL 454
DLLP V G+KTPFR P G+R L + E+T LR+LAR LP HFALGRN QGLA A+L
Sbjct: 342 DLLPEVVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNTRLQGLAAAVL 401
Query: 455 KLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVAS 514
KLWEKSL+AKIAVK GIQNTNN+ MA LK LTGGT++ RNK +++LYRGKDFLP V
Sbjct: 402 KLWEKSLIAKIAVKVGIQNTNNEQMAWNLKHLTGGTIILRNKDFVILYRGKDFLPGGVKQ 461
Query: 515 ALAEREQCAKQIQDVEEKVRSKTLEATP--SGETEGQAPAGTLAEFYEAQKRWGREVSAE 572
++ E+E Q EE+ R +++ +G ++ G+ + + Q +E +
Sbjct: 462 SVIEQEARVYAQQVKEEEARLMVMDSLKMFAGLPSEESSVGSFRGYQDFQLNHVQETTEN 521
Query: 573 EREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITD 632
+ EA K + + +K E +L + K R+ LAK+ S PS D+E +T+
Sbjct: 522 NMALIELEAEKHRLEKELKDQERRLFILTKKIERSNEALAKLHNSWNPSEQSADKELLTE 581
Query: 633 EERAMFRRVGLRMKAFLPLGI 653
EER +FR++GL+M + LGI
Sbjct: 582 EERMIFRKIGLKMDEHVLLGI 602
>gi|326521980|dbj|BAK04118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 232
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/173 (75%), Positives = 158/173 (91%)
Query: 606 RAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMH 665
RA +LL+KIEASMV + P D+E IT EER++FRR+GL+MKA+LP+GIRGVFDGV+ENMH
Sbjct: 23 RAGKLLSKIEASMVLANPSDDREMITAEERSVFRRIGLKMKAYLPVGIRGVFDGVIENMH 82
Query: 666 LHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI 725
LHWK+RE+VKLITKQKTLA+VE+TARLLEYESGGIL+AIERVPKG ALIFYRGKNYRRPI
Sbjct: 83 LHWKHREVVKLITKQKTLAFVEETARLLEYESGGILVAIERVPKGHALIFYRGKNYRRPI 142
Query: 726 SLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDG 778
++RPRNLLTKAKALKR+VAMQRHEALSQHI LE ++QMK+++G+ +E+G
Sbjct: 143 NIRPRNLLTKAKALKRAVAMQRHEALSQHIDQLEINMKQMKRDLGMEDYDEEG 195
>gi|147852955|emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
Length = 1399
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 224/413 (54%), Gaps = 58/413 (14%)
Query: 117 DSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGE-----------ERLED 165
D+ + AI+RI +LR+LG DE D + GE R+
Sbjct: 265 DAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIFVPLPNQLPKHRVGH 324
Query: 166 LLRREWVRP-NTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAEL 224
+ + W P N V G LR ++ R+ +APTLAEL
Sbjct: 325 TIDQSWSLPENPVPEPGTGGVITRF--------HELRKEVKREKKLVRKEDERAPTLAEL 376
Query: 225 TIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKT 284
T+ +EELRRL+ G+ +R+++ V KAG+T+ ++ IH++WR+ E+V+++ ++ +MK
Sbjct: 377 TLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKR 436
Query: 285 AHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP---------------------------S 317
H+I+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 437 THDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHD 496
Query: 318 SKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKSEV-----PVRILDHSKPMTEEEAECNS 372
K G GD V S A + S + P R+ + E E +
Sbjct: 497 GKEVCSSGKGD------VKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADR 550
Query: 373 LLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLAR 432
LLD LGPRF +WWG LP+DADLLP V GY+ PFRLLP G++ +LTN EMT LRRL R
Sbjct: 551 LLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGR 610
Query: 433 SLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKS 485
LPCHFALGRNR QGLA +++KLWEK +AKIAVKRG+QNTN+++MAEELKS
Sbjct: 611 PLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKS 663
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 179/271 (66%), Gaps = 10/271 (3%)
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL 538
+ EE+++LTGGTLL R++ +IV YRGKDFLPP V+SA+ R + I ++K+ L
Sbjct: 840 ILEEVRNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYG--IHRGKQKIDHHRL 897
Query: 539 EATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLA 598
E + A + ++ ++ + +M+ A +V+R KL+
Sbjct: 898 AINAE---ESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEA-----VVERTSIKLS 949
Query: 599 VSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFD 658
++ KK RAE+LLA++E + +P P+ D+E IT+EER M R+VGLRMK FL LG RG+FD
Sbjct: 950 MALEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFD 1009
Query: 659 GVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRG 718
G VENMHLHWKYRELVK+I+ +++ + AR LE ESGGIL+A+ERV KG+A+I YRG
Sbjct: 1010 GTVENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRG 1069
Query: 719 KNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
KNY+RP SLRP+ LL K +A+KRS+ QR E
Sbjct: 1070 KNYKRPASLRPQTLLNKREAMKRSLEAQRRE 1100
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 622 GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQK 681
P + T+ +EE + +G++++ L +G G+ +G+V +H W+ E+VK+ +
Sbjct: 370 APTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDI 429
Query: 682 TLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNL 732
++ T +LE ++GG++I G +I YRG NY+ P L NL
Sbjct: 430 CKLNMKRTHDILERKTGGLVIW----RSGSYIILYRGANYKYPYFLSDNNL 476
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P + + I +EE LR+ G+ ++ + + + G+ + +H W+ ELV++ +
Sbjct: 974 PEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRS 1033
Query: 279 ATDMKTAHEIVERRTGGLVI----WRAGSVMVVYRGNNYAGPSS-KPQPL 323
D+ +E +GG+++ G +++YRG NY P+S +PQ L
Sbjct: 1034 IEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTL 1083
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 111/281 (39%), Gaps = 16/281 (5%)
Query: 412 PTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGI 471
PT L E+ L+ + + +G+ +G+ I + W ++ V KI + I
Sbjct: 371 PTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCE-DI 429
Query: 472 QNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPP------NVASALAEREQCAKQ 525
N K + L+ TGG ++ R+ YI+LYRG ++ P N+ + + Q
Sbjct: 430 CKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQ 489
Query: 526 IQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAK 585
+ + E + ++ G PA +A Q G R ++ EA +
Sbjct: 490 MNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQ---GVGYPTRVRFQLPGEAQLEE 546
Query: 586 HA-RLVKRIEHKLA---VSQAKKLRAERLLAKIEASMVPSG--PDYDQETITDEERAMFR 639
A RL+ + + + A+ L A + P P + +T++E + R
Sbjct: 547 EADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLR 606
Query: 640 RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQ 680
R+G + LG G+ +M W+ E+ K+ K+
Sbjct: 607 RLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKR 647
>gi|413946392|gb|AFW79041.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 197
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 125/185 (67%), Positives = 158/185 (85%), Gaps = 7/185 (3%)
Query: 630 ITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDT 689
ITDEE+++FRR+GLR+KA+LPLG+RGVFDGV+ENMHLHWK+RE+VKLI+KQKTL++VE+T
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 690 ARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
ARLL YESGGIL+AIERVPKG+ALIFYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHE
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 750 ALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDH-VSVLPQNEDDDYVSDED 808
ALSQHI LE+ I+QMK ++G+ +D E+ + S ++D+ V+ + +ED D D
Sbjct: 122 ALSQHIDQLESNIKQMKLDLGI-EDYEEQDEDSSDSENEYDNAVTSVSYDEDQD-----D 175
Query: 809 FDSEA 813
FD A
Sbjct: 176 FDESA 180
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
I DEE RR G+ L+ + + G+ V+ +H W+ E+V+L + + ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 286 HEIVERRTGGLVIWR----AGSVMVVYRGNNYAGP 316
++ +GG+++ G ++ YRG NY P
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRP 96
>gi|413946391|gb|AFW79040.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 266
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/140 (80%), Positives = 135/140 (96%)
Query: 630 ITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDT 689
ITDEE+++FRR+GLR+KA+LPLG+RGVFDGV+ENMHLHWK+RE+VKLI+KQKTL++VE+T
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 690 ARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
ARLL YESGGIL+AIERVPKG+ALIFYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHE
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Query: 750 ALSQHISDLENTIEQMKKEI 769
ALSQHI LE+ I+QMK ++
Sbjct: 122 ALSQHIDQLESNIKQMKLDL 141
>gi|357516865|ref|XP_003628721.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
gi|355522743|gb|AET03197.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 387
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 219/401 (54%), Gaps = 51/401 (12%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
+ + ER V AG+T +++ IH+KW DE+V+ KF L+ +MK A++I+E +TGG+V
Sbjct: 2 ALMMVERFGVGVAGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGIV 61
Query: 298 IWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTARSVDEKS----EVP 353
+WR GS +V+YRG +Y P + + ++ + + SVD +S EV
Sbjct: 62 VWRLGSSIVLYRGMSYKLPCVES----------YTKVYNANENAVDNSVDVRSGSSVEVS 111
Query: 354 VRIL-DHSKPMTEEEAE----------------CNSLLDSLGPRFQEWWGTGILPVDADL 396
V+++ ++ + AE N LLD LGPRF++W G L VDAD
Sbjct: 112 VKVMVGPAESFNRDSAEYLKDMSEEEESMESIKLNLLLDELGPRFKDWTGREPLTVDADQ 171
Query: 397 LPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKL 456
LP V GYKTPFRLLP G++ L+N EMT +RR+AR HFAL GLA AI+KL
Sbjct: 172 LPVVVPGYKTPFRLLPYGVKPCLSNKEMTVMRRIARRTALHFAL-------GLARAIVKL 224
Query: 457 WEKSLVAKIAVKRGIQNTNNKLMAEELKS-LTGGTLLQRNK----FYIVLYRGKDFLPP- 510
WE S VAKIA++ G+ T+N MAEELK L L+ + K ++++ G F
Sbjct: 225 WETSAVAKIAIRHGVPYTSNDRMAEELKVFLINFCLMHQLKHEHIHSLIIFMGVSFYGAM 284
Query: 511 -----NVASALAEREQCAKQIQDVEEKVR--SKTLEATPSGETEGQAPAGTLAEFYEAQK 563
+V L ER++ QD EEK R + ++ + S ++ Q AGTLAE A
Sbjct: 285 TYCLLSVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMQLLAGTLAETRAATA 344
Query: 564 RWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKK 604
WG + S +E KM+ E++ + + L++ E KLA+ K+
Sbjct: 345 NWGHQPSKQEVGKMIRESTLDRLSSLIRNHESKLALVSYKR 385
>gi|154986385|gb|ABS89146.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 668
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 181/286 (63%), Gaps = 20/286 (6%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG +PVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 370 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 429
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA +LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 430 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 489
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ G E
Sbjct: 490 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTIYKAKPGIEE- 537
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
++ ++ + +VS RE+ V E + K +E +L+ + A+K +
Sbjct: 538 -----SMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTVAKDVETRLSQAIAEKAK 592
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLG 652
AE+L+ ++E + S + +ETI+++ER M R+VGL+MK FL LG
Sbjct: 593 AEKLIEELEKASPLSKAEV-RETISEDERYMLRKVGLKMKQFLLLG 637
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 123 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 182
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 183 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYP 220
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 615 EASMVPSGPDYDQE-TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+AS PS P E + +E + +G+R++ L +G G+ +G+V +H W+ E+
Sbjct: 114 DASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEV 173
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI---SLRPR 730
VKL + + T +LE ++GG++I G +I YRG NY P S R
Sbjct: 174 VKLRCEDVWAMNMRRTHEILERKTGGLVIWR----SGSTIILYRGTNYTYPYFHHSERVD 229
Query: 731 NLLTKAKALKRSVAMQRHEALSQHISDLENTIE 763
+ L K + +S + E SQH S E + E
Sbjct: 230 SFLDKESS-DQSNSGDEDETSSQHGSSHEKSSE 261
>gi|413918578|gb|AFW58510.1| CFM2 alternative polyadenylation form 1 [Zea mays]
Length = 681
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 181/286 (63%), Gaps = 20/286 (6%)
Query: 369 ECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLR 428
E + LLD LGPRF WWG +PVDADLLP V GY+ PFRLLP+G+ +LT+ EMT LR
Sbjct: 383 EADKLLDGLGPRFSGWWGYDPVPVDADLLPAIVPGYRRPFRLLPSGVPPKLTDREMTILR 442
Query: 429 RLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLTG 488
RLA +LP H+ALGR+ N QGLA +++KLWE+ VAKIA+KR NT+++L+ EE+K LTG
Sbjct: 443 RLAHALPFHYALGRSSNLQGLAASMIKLWERCEVAKIALKRDAHNTDSELITEEVKELTG 502
Query: 489 GTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTLEATPSGETEG 548
GTLL R+K IV YRGKDFLPP V+ A+ +R K+ S T+ G E
Sbjct: 503 GTLLSRDKESIVFYRGKDFLPPAVSLAIEKR-----------RKLGSSTIYKAKPGIEE- 550
Query: 549 QAPAGTLAEFYEAQKRWGREVSAEEREK--MVEEASKAKHARLVKRIEHKLAVSQAKKLR 606
++ ++ + +VS RE+ V E + K +E +L+ + A+K +
Sbjct: 551 -----SMPTQNDSVLKVSSDVSVHVREEGTSVTENRAESLNTVAKDVETRLSQAIAEKAK 605
Query: 607 AERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLG 652
AE+L+ ++E + S + +ETI+++ER M R+VGL+MK FL LG
Sbjct: 606 AEKLIEELEKASPLSKAEV-RETISEDERYMLRKVGLKMKQFLLLG 650
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 74/98 (75%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 136 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 195
Query: 279 ATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
A +M+ HEI+ER+TGGLVIWR+GS +++YRG NY P
Sbjct: 196 AMNMRRTHEILERKTGGLVIWRSGSTIILYRGTNYTYP 233
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 615 EASMVPSGPDYDQE-TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+AS PS P E + +E + +G+R++ L +G G+ +G+V +H W+ E+
Sbjct: 127 DASGSPSAPPSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEV 186
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPI---SLRPR 730
VKL + + T +LE ++GG++I G +I YRG NY P S R
Sbjct: 187 VKLRCEDVWAMNMRRTHEILERKTGGLVIWR----SGSTIILYRGTNYTYPYFHHSERVD 242
Query: 731 NLLTKAKALKRSVAMQRHEALSQHISDLENTIE 763
+ L K + +S + E SQH S E + E
Sbjct: 243 SFLDKESS-DQSNSGDEDETSSQHGSSHEKSSE 274
>gi|413946390|gb|AFW79039.1| hypothetical protein ZEAMMB73_840751 [Zea mays]
Length = 132
Score = 222 bits (565), Expect = 7e-55, Method: Composition-based stats.
Identities = 100/120 (83%), Positives = 119/120 (99%)
Query: 630 ITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDT 689
ITDEE+++FRR+GLR+KA+LPLG+RGVFDGV+ENMHLHWK+RE+VKLI+KQKTL++VE+T
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 690 ARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHE 749
ARLL YESGGIL+AIERVPKG+ALIFYRGKNYRRPI++RPRNLLTKAKALKR+VAMQRHE
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHE 121
Score = 40.4 bits (93), Expect = 4.0, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
I DEE RR G+ L+ + + G+ V+ +H W+ E+V+L + + ++
Sbjct: 2 ITDEEKSVFRRIGLRLKAYLPLGVRGVFDGVIENMHLHWKHREVVKLISKQKTLSFVEET 61
Query: 286 HEIVERRTGGLVIW----RAGSVMVVYRGNNYAGP 316
++ +GG+++ G ++ YRG NY P
Sbjct: 62 ARLLAYESGGILVAIERVPKGYALIFYRGKNYRRP 96
>gi|414870653|tpg|DAA49210.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 467
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 202/384 (52%), Gaps = 33/384 (8%)
Query: 125 AIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGE 184
A+ I+ R+R+L L + AA +E RE P + E +
Sbjct: 81 AVLGIIRRVRSLELSDAPSPNSVHTSNSGAAAAAFHLTIELSPPRE---PGQYVVE---K 134
Query: 185 EDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
E +PW +E L+ R ++ + PT AE +E EL RLRR +
Sbjct: 135 EKSRAVPWAAARDEGLKVALR------REKKPREPTRAETELETHELHRLRRLARGIGRW 188
Query: 245 INVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
KAG+T +V++++ +W +EL ++ E L M A EI+E +TGGLV+W G
Sbjct: 189 ARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGD 248
Query: 304 VMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDG---STARSVDEKSEVPVRILDHS 360
+ VYRG+ Y + F+ +V D + +K E PV+
Sbjct: 249 MHFVYRGSKYQQ--------NAKHSHTFLTNVHKDDAFQENDQSICGQKDEEPVK----- 295
Query: 361 KPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLT 420
T E E N LLD+LGPRF +WW LPVDADLLP V G+KTP+RL P G+R L
Sbjct: 296 --GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLA 353
Query: 421 NAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMA 480
+ E+T LR+LAR LP HFALGRN QGLA AILKLWEKSL+AKIAVK GIQNTNN+ MA
Sbjct: 354 DEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMA 413
Query: 481 EEL--KSLTGGTLLQRNKFYIVLY 502
L K+ G +L Q + ++L+
Sbjct: 414 WNLKGKAYIGLSLTQSTESVLLLF 437
>gi|414870651|tpg|DAA49208.1| TPA: chloroplast RNA splicing1 [Zea mays]
Length = 496
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 203/405 (50%), Gaps = 46/405 (11%)
Query: 125 AIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEGE 184
A+ I+ R+R+L L + AA +E RE P + E +
Sbjct: 81 AVLGIIRRVRSLELSDAPSPNSVHTSNSGAAAAAFHLTIELSPPRE---PGQYVVE---K 134
Query: 185 EDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRER 244
E +PW +E L+ R ++ + PT AE +E EL RLRR +
Sbjct: 135 EKSRAVPWAAARDEGLKVALR------REKKPREPTRAETELETHELHRLRRLARGIGRW 188
Query: 245 INVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
KAG+T +V++++ +W +EL ++ E L M A EI+E +TGGLV+W G
Sbjct: 189 ARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGD 248
Query: 304 VMVVYRGNNYAGPSSKPQPL--------------------DGDGDTLFVPHVSSTDGSTA 343
+ VYRG+ Y + G + + + D +
Sbjct: 249 MHFVYRGSKYQQNAKHSHTFLTNVHKGYLVKHNVHTTLLKYGSIGPVLINNYGEADDAFQ 308
Query: 344 RS----VDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPP 399
+ +K E PV+ T E E N LLD+LGPRF +WW LPVDADLLP
Sbjct: 309 ENDQSICGQKDEEPVK-------GTLYEREVNRLLDTLGPRFVDWWWDTPLPVDADLLPE 361
Query: 400 KVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEK 459
V G+KTP+RL P G+R L + E+T LR+LAR LP HFALGRN QGLA AILKLWEK
Sbjct: 362 FVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRNTRLQGLAAAILKLWEK 421
Query: 460 SLVAKIAVKRGIQNTNNKLMAEEL--KSLTGGTLLQRNKFYIVLY 502
SL+AKIAVK GIQNTNN+ MA L K+ G +L Q + ++L+
Sbjct: 422 SLIAKIAVKIGIQNTNNEQMAWNLKGKAYIGLSLTQSTESVLLLF 466
>gi|9837552|gb|AAG00596.1|AF290415_1 CRS1 [Zea mays]
Length = 267
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 143/241 (59%), Gaps = 20/241 (8%)
Query: 267 DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGD 326
+EL ++ E L M A EI+E +TGGLV+W G + VYRG+ Y +
Sbjct: 12 EELAAVRIVEPLRRSMDRAREILEIKTGGLVVWTKGDMHFVYRGSKYQQNAKHSHT---- 67
Query: 327 GDTLFVPHVSSTDG---STARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQE 383
F+ +V D + +K E PV+ T E E N LLD+LGPRF +
Sbjct: 68 ----FLTNVHKDDAFQENDQSICGQKDEEPVK-------GTLYEREVNRLLDTLGPRFVD 116
Query: 384 WWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRN 443
WW LPVDADLLP V G+KTP+RL P G+R L + E+T LR+LAR LP HFALGRN
Sbjct: 117 WWWDTPLPVDADLLPEFVPGFKTPYRLCPPGVRPTLADEELTYLRKLARLLPTHFALGRN 176
Query: 444 RNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEEL--KSLTGGTLLQRNKFYIVL 501
QGLA AILKLWEKSL+AKIAVK GIQNTNN+ MA L K+ G +L Q + ++L
Sbjct: 177 TRLQGLAAAILKLWEKSLIAKIAVKIGIQNTNNEQMAWNLKGKAYIGLSLTQSTESVLLL 236
Query: 502 Y 502
+
Sbjct: 237 F 237
>gi|167998334|ref|XP_001751873.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696971|gb|EDQ83308.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 149/236 (63%), Gaps = 14/236 (5%)
Query: 593 IEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLG 652
+E +L++ KK E+ LAK++ M + +E I+DEER MF ++GLRM+A L +G
Sbjct: 110 LEERLSLVARKKKYVEKELAKLDGQMKLADAPPAKEQISDEERYMFMKLGLRMRARLLMG 169
Query: 653 I-----RGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERV 707
RGVFDGVVENMHLHWK+RELVK+I K E TA++LE ESGG+L+ I
Sbjct: 170 KLSSGRRGVFDGVVENMHLHWKHRELVKVIFKGPIFE-AEQTAKILEMESGGVLVGIVTT 228
Query: 708 PKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKK 767
KG A+IFYRGKNY+RP LRPR+LL+K +A +RS+ MQR +L QH+ LE I ++
Sbjct: 229 TKGQAIIFYRGKNYQRPSELRPRHLLSKRQAYERSLEMQRKRSLEQHMLKLEKEIGKL-- 286
Query: 768 EIGVSKDEEDGNIRCSGDLKQFDHVS-----VLPQNEDDDYVSDEDFDSEADEDSE 818
++G+ + E GN + K +S VL +D+++ SDE+++ +D E
Sbjct: 287 QVGLYETGE-GNSGLEMEEKNLLALSEPLGTVLEDFDDEEFRSDENYNENLADDIE 341
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKA-----GLTQDVMRKIHDKWRKDELVRLKFHEVLAT 280
I DEE + G+ +R R+ + K G+ V+ +H W+ ELV++ F +
Sbjct: 147 ISDEERYMFMKLGLRMRARLLMGKLSSGRRGVFDGVVENMHLHWKHRELVKVIFKGPIFE 206
Query: 281 DMKTAHEIVERRTGGLVIW----RAGSVMVVYRGNNYAGPS 317
+TA +I+E +GG+++ G ++ YRG NY PS
Sbjct: 207 AEQTA-KILEMESGGVLVGIVTTTKGQAIIFYRGKNYQRPS 246
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 419 LTNAEMTDLRR--LARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNN 476
LT E LR+ L +S P H +G++ GLA AI ++K A + VK ++T
Sbjct: 366 LTIKERIRLRQEALKQSDPMHINIGKSNMVAGLAKAIRLYFQKQPFAIVGVKGRAKDTPV 425
Query: 477 KLMAEELKSLTGGTLLQRNKFYIVLYRG 504
+ + ++L+ TG L+ R ++LYRG
Sbjct: 426 EEIIQQLEEATGAVLVSREPNKLILYRG 453
>gi|413946393|gb|AFW79042.1| hypothetical protein ZEAMMB73_840751, partial [Zea mays]
Length = 140
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 114/141 (80%), Gaps = 2/141 (1%)
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVEEKVRSKTL 538
MAEE+K+LTGGTLL RNKFYIV+YRGKDFLP +VA+ LAERE+ K I ++EE+ R + L
Sbjct: 1 MAEEIKNLTGGTLLLRNKFYIVIYRGKDFLPTSVAAVLAEREELTKDIYNMEEQ-RRRVL 59
Query: 539 EATPSGE-TEGQAPAGTLAEFYEAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKL 597
PS + +G A AGTLAEF EAQ RWGREV+A+E+E+M E +S+++ +L +++EHKL
Sbjct: 60 ITQPSDDGLDGHALAGTLAEFQEAQARWGREVTAKEQEEMKEASSRSEKQKLYRKLEHKL 119
Query: 598 AVSQAKKLRAERLLAKIEASM 618
+++QAK RAERLL+KIEAS+
Sbjct: 120 SIAQAKIHRAERLLSKIEASL 140
>gi|147838476|emb|CAN69859.1| hypothetical protein VITISV_037991 [Vitis vinifera]
Length = 371
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 7/124 (5%)
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
G RGVFDGV+E +H HWK+RE+VK+IT Q++ + V TA+LLE ESGG+L++I+++ +G
Sbjct: 118 FGRRGVFDGVIEGLHQHWKHREIVKVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEG 177
Query: 711 FALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL-------SQHISDLENTIE 763
A+I YRGKNYRRPI L P+NLLTK +AL RS+ MQR +L Q ISDL+ +
Sbjct: 178 HAIIIYRGKNYRRPIKLVPKNLLTKREALNRSLEMQRIGSLKFFAYQRQQAISDLKLKLA 237
Query: 764 QMKK 767
++K
Sbjct: 238 DLQK 241
>gi|297612106|ref|NP_001068192.2| Os11g0592400 [Oryza sativa Japonica Group]
gi|255680227|dbj|BAF28555.2| Os11g0592400, partial [Oryza sativa Japonica Group]
Length = 108
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Query: 648 FLPL-GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIER 706
+PL G RGVFDG +ENMHLHWKYRELVK++ K K+ V+ A LE ESGGIL+++++
Sbjct: 3 IVPLSGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDK 62
Query: 707 VPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEAL 751
V KG+A++ +RGK+Y RP LRPRNLL+K KAL RS+ +QR E L
Sbjct: 63 VSKGYAIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREVL 107
>gi|388504790|gb|AFK40461.1| unknown [Medicago truncatula]
Length = 190
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 37/187 (19%)
Query: 124 NAIERIVLRLRNLGLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRPNTVLREVEG 183
NAI+RIVL+ RNL +DDE I L R+W+R
Sbjct: 41 NAIDRIVLQFRNLSDQNDDE--------PIRTLLPNY-----FLHRQWIR---------- 77
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
D+S++P E E + + ++ + P L E EEL RLR G++L++
Sbjct: 78 -SDESVIPSEEVEHKL--------LKKKKKNEVTVPCL-----EKEELSRLRTMGIHLKQ 123
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+I++PK+GLT+ V+++IH +W +ELV+LKFH+ L +M AH IV+RRTGGLVIWR+GS
Sbjct: 124 KISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLAHNIVQRRTGGLVIWRSGS 183
Query: 304 VMVVYRG 310
VM VYRG
Sbjct: 184 VMWVYRG 190
>gi|225444203|ref|XP_002270373.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Vitis vinifera]
gi|296089227|emb|CBI38999.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 8/189 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ +P P YD E +T+EE+ +R G + K ++
Sbjct: 85 RIRYKL---EKAKRKEEWLIEKLRKFDIPKAPTEAYDPEILTEEEKFYLKRTGEKKKNYV 141
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK+I K + V + A L S GI+I I+ P
Sbjct: 142 PVGRRGVFGGVVLNMHLHWKKHETVKVICKPCKVGQVYEYAEELARLSKGIMIDIK--PN 199
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+IFYRGKNY +P + P + L+K+KAL++ Q E SQ I LEN +E+ K +
Sbjct: 200 N-TIIFYRGKNYVQPQVMSPPDTLSKSKALEKYRYEQSLEHTSQFIEKLENELEEYHKHL 258
Query: 770 GVSKDEEDG 778
+ +++
Sbjct: 259 AQYRKQKEN 267
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 217 KAPTLA---ELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLK 273
KAPT A E+ E+E+ L+R G + + V + G+ V+ +H W+K E V++
Sbjct: 111 KAPTEAYDPEILTEEEKFY-LKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVI 169
Query: 274 FHEVLATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGPSSKPQP 322
+ E + R + G++I + + ++ YRG NY P P
Sbjct: 170 CKPCKVGQVYEYAEELARLSKGIMIDIKPNNTIIFYRGKNYVQPQVMSPP 219
>gi|242076260|ref|XP_002448066.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
gi|241939249|gb|EES12394.1| hypothetical protein SORBIDRAFT_06g020410 [Sorghum bicolor]
Length = 338
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P+ +D E +T+EE+ +R G + K ++
Sbjct: 134 RIRYKL---EKAKRKEEWLIEKLRKYDVPRTPEPVHDPEILTEEEKFYLKRTGEKKKNYV 190
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK++ K V + A L S G +I I+ P
Sbjct: 191 PVGRRGVFGGVVLNMHLHWKNHETVKVVCKPCRPGQVYEYAEELTRLSKGTIIDIK--PN 248
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
++FYRGKNY +P + P + L+K KAL++ +Q E SQ I LE +E KK +
Sbjct: 249 N-TIMFYRGKNYVQPQVMSPPDTLSKQKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHV 307
Query: 770 GVSKDEE 776
+ K+ E
Sbjct: 308 ALFKNRE 314
>gi|115459160|ref|NP_001053180.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|21740788|emb|CAD41533.1| OSJNBb0091E11.2 [Oryza sativa Japonica Group]
gi|38346227|emb|CAE02049.2| OJ990528_30.7 [Oryza sativa Japonica Group]
gi|90265163|emb|CAH67731.1| H0522A01.2 [Oryza sativa Indica Group]
gi|113564751|dbj|BAF15094.1| Os04g0492900 [Oryza sativa Japonica Group]
gi|116310744|emb|CAH67539.1| H0425E08.7 [Oryza sativa Indica Group]
gi|125548841|gb|EAY94663.1| hypothetical protein OsI_16441 [Oryza sativa Indica Group]
Length = 479
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 139/260 (53%), Gaps = 26/260 (10%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE PS P +D E +T EE F ++G + K ++P+
Sbjct: 142 KILYKLKLARNKEERLVAALTKIEPDD-PSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPV 200
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI++ I+ +G
Sbjct: 201 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQ---EGN 257
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + P+ L + KAL +S +R AL ++I LE + + ++
Sbjct: 258 TIIMYRGKNYAQPPPEIMSPKVTLPRKKALDKSKYRERLRALRRYIPRLEQELVDLHAQM 317
Query: 770 GVSKDEEDGN----IRCSGD------LKQFDHVSVLPQNEDD---------DYVSDEDFD 810
+++D + N I C D K++ SV ++ D + DE+++
Sbjct: 318 KLARDYKGQNAAEDITCISDSVNSTSAKEYSSCSVRKRSVSDLLSESIEGSGRLEDENYE 377
Query: 811 SEADEDSELSSFESDDNDLS 830
AD SE ++ S+ DLS
Sbjct: 378 VSADSASESITY-SESEDLS 396
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
PT + EE + G + + V + G+ Q V+ +H W+K + +++
Sbjct: 172 PTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFT 231
Query: 279 ATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
++K + R +GG+V+ + G+ +++YRG NYA P
Sbjct: 232 PDEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYAQP 270
>gi|162459283|ref|NP_001105859.1| LOC732768 [Zea mays]
gi|89212802|gb|ABD63903.1| CFM6 [Zea mays]
gi|413918693|gb|AFW58625.1| hypothetical protein ZEAMMB73_217436 [Zea mays]
Length = 338
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 105/189 (55%), Gaps = 8/189 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P+ +D E +T+EE+ +R G + K ++
Sbjct: 133 RIRYKL---EKAKRKEEWLIEKLRKYEVPRTPEPVHDPEILTEEEKFYLKRTGEKKKNYV 189
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK++ K V + A L S G +I I+ P
Sbjct: 190 PVGRRGVFGGVVLNMHLHWKKHETVKVVCKPCRPGQVYEYAEELTRLSKGTVIDIK--PN 247
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
++FYRGKNY +P + P L+K KAL++ +Q E SQ I LE +E KK +
Sbjct: 248 N-TIMFYRGKNYVQPKVMSPPETLSKQKALEKYRYLQSLEHTSQFIEKLEKELEDYKKHV 306
Query: 770 GVSKDEEDG 778
+ K+ G
Sbjct: 307 ALFKNHNKG 315
>gi|115467732|ref|NP_001057465.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|113595505|dbj|BAF19379.1| Os06g0304500 [Oryza sativa Japonica Group]
gi|125596971|gb|EAZ36751.1| hypothetical protein OsJ_21087 [Oryza sativa Japonica Group]
Length = 348
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 103/185 (55%), Gaps = 8/185 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P+ +D E +T+EE+ +R G + K ++
Sbjct: 145 RIRYKL---EKAKRKEEWLIEKLRKYEVPRSPEPVHDPEILTEEEKFYLKRTGEKKKNYV 201
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK+I K V + A L S G +I I+
Sbjct: 202 PVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVIDIK---P 258
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+IFYRGKNY +P + P + L+K KAL++ Q E SQ I LE +E +K +
Sbjct: 259 NNTIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSQFIEKLEKELEDYQKHV 318
Query: 770 GVSKD 774
+ K+
Sbjct: 319 ALFKN 323
>gi|357478871|ref|XP_003609721.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355510776|gb|AES91918.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 399
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 108/192 (56%), Gaps = 16/192 (8%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + L+ K+ VP P +D E +T+EER +R G + K ++
Sbjct: 215 RIRYKL---EKAKRKETWLIEKLRKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYV 271
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ----KTLAYVEDTARLLEYESGGILIAIE 705
P+G RGVF GVV NMHLHWK E VK+I K + Y E+ ARL S GI+I I+
Sbjct: 272 PVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQAHEYAEELARL----SKGIVIDIK 327
Query: 706 RVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P +IFYRGKNY +P + P + L+KAKAL++ Q E SQ I LE +E+
Sbjct: 328 --PNSI-IIFYRGKNYVQPKVMSPPDTLSKAKALEKYRYEQSLEHTSQFIERLEKELEEY 384
Query: 766 KKEIGVSKDEED 777
+ + K E++
Sbjct: 385 HEHVAKFKKEKE 396
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 16/114 (14%)
Query: 214 RRMKAPTLAELTIE-----DEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDE 268
R+ P L T + +EE L+R G + + V + G+ V+ +H W+ E
Sbjct: 235 RKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGGVVLNMHLHWKNHE 294
Query: 269 LVRLKFHEVLATDMK--TAHEIVE---RRTGGLVI-WRAGSVMVVYRGNNYAGP 316
V+ V+ K AHE E R + G+VI + S+++ YRG NY P
Sbjct: 295 TVK-----VICKPCKPGQAHEYAEELARLSKGIVIDIKPNSIIIFYRGKNYVQP 343
>gi|326525483|dbj|BAJ88788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 340
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 12/192 (6%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
RI +KL ++ K+ L K EA P P +D E +T+EE+ +R G + K ++P+
Sbjct: 136 RIRYKLEKAKRKEEWLIEKLRKYEAPRAPE-PVHDPEILTEEEKFYLKRTGEKKKNYVPV 194
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQ----KTLAYVEDTARLLEYESGGILIAIERV 707
G RGVF GVV NMHLHWK E +K++ K + Y E+ ARL S G +I I+
Sbjct: 195 GRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARL----SKGTVIDIK-- 248
Query: 708 PKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKK 767
+IFYRGKNY +P + P + L+K KAL++ Q E S+ I LE +E +K
Sbjct: 249 -PNNTIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSKFIEQLEQELEDYQK 307
Query: 768 EIGVSKDEEDGN 779
+ + K E N
Sbjct: 308 HVALFKKREGAN 319
>gi|212723506|ref|NP_001132081.1| uncharacterized protein LOC100193495 [Zea mays]
gi|194693368|gb|ACF80768.1| unknown [Zea mays]
gi|414586598|tpg|DAA37169.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
gi|414586599|tpg|DAA37170.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 485
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 112/190 (58%), Gaps = 6/190 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE PS P +D E +T EE F ++G + K ++P+
Sbjct: 149 KILYKLKLARKKEERLVVALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPV 207
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI++ I+ G
Sbjct: 208 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQ---DGN 264
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + P+ L++ KAL +S M++ AL ++I LE +E + ++
Sbjct: 265 TIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQM 324
Query: 770 GVSKDEEDGN 779
++ + + N
Sbjct: 325 KLAGEHQGQN 334
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
PT + EE + G + + V + G+ Q V+ +H W+K + +++
Sbjct: 179 PTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFT 238
Query: 279 ATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
++K + +GG+V+ + G+ +++YRG NYA P
Sbjct: 239 PEEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYAQP 277
>gi|356524301|ref|XP_003530768.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 16/196 (8%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGP--DYDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + L+ K+ VP P +D E +T+EER +R G + K ++
Sbjct: 88 RITYKL---EKAKRKETWLVEKLRKFDVPKSPPETFDPEILTEEERHYLKRTGEKKKHYV 144
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ----KTLAYVEDTARLLEYESGGILIAIE 705
P+G RGVF GVV NMHLHWK E VK+I K + Y E+ ARL S GI+I I+
Sbjct: 145 PVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARL----SKGIVIDIK 200
Query: 706 RVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P +IFYRGKNY +P + P N L+K KAL++ Q E SQ I LE +E+
Sbjct: 201 --PNN-TIIFYRGKNYVQPEVMSPPNTLSKVKALEKYRYEQSLEHTSQFIERLEKELEEY 257
Query: 766 KKEIGVSKDEEDGNIR 781
+ + K ++ N +
Sbjct: 258 HQHLAKFKKGKEDNAK 273
>gi|357167884|ref|XP_003581379.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 485
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE + PS P +D E +T EE F ++G + K ++P+
Sbjct: 149 KILYKLKLARKKEERLLAALKKIEPN-DPSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPV 207
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI+++I+ +G
Sbjct: 208 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIASELAILSGGIVLSIQ---EGN 264
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + P+ L + KAL +S R AL ++I LE +E + ++
Sbjct: 265 TIIMYRGKNYAQPPPEIMSPKIALPRKKALDKSKYRDRLRALRRYIPRLEQELEDLHAQM 324
Query: 770 GVS 772
+S
Sbjct: 325 KLS 327
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
PT + EE + G + + V + G+ Q V+ +H W+K + +++
Sbjct: 179 PTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFT 238
Query: 279 ATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
++K + +GG+V+ + G+ +++YRG NYA P
Sbjct: 239 PEEVKEIASELAILSGGIVLSIQEGNTIIMYRGKNYAQP 277
>gi|242073570|ref|XP_002446721.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
gi|241937904|gb|EES11049.1| hypothetical protein SORBIDRAFT_06g021160 [Sorghum bicolor]
Length = 484
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 6/191 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE PS P +D E +T EE F ++G + K ++P+
Sbjct: 148 KILYKLKLARKKEERLVAALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPV 206
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI++ I+ G
Sbjct: 207 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELARLSGGIVLDIQ---DGN 263
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + P+ L++ KAL +S M++ AL ++I LE +E + ++
Sbjct: 264 TIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQM 323
Query: 770 GVSKDEEDGNI 780
++ + + ++
Sbjct: 324 KLAGEHKGQSV 334
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 171 WVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEE 230
W + + R E+ L R++EE L A +K E PT + EE
Sbjct: 134 WKKKKEIQRMTAEEKILYKLKLARKKEERLVAALKKIEPED----PSEPTHDPEVLTPEE 189
Query: 231 LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290
+ G + + V + G+ Q V+ +H W+K + +++ ++K +
Sbjct: 190 HFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIATELA 249
Query: 291 RRTGGLVI-WRAGSVMVVYRGNNYAGP 316
R +GG+V+ + G+ +++YRG NYA P
Sbjct: 250 RLSGGIVLDIQDGNTIIMYRGKNYAQP 276
>gi|238007578|gb|ACR34824.1| unknown [Zea mays]
gi|414586597|tpg|DAA37168.1| TPA: hypothetical protein ZEAMMB73_229116 [Zea mays]
Length = 342
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 112/190 (58%), Gaps = 6/190 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE PS P +D E +T EE F ++G + K ++P+
Sbjct: 6 KILYKLKLARKKEERLVVALKKIEPE-DPSEPTHDPEVLTPEEHFYFLKMGQKCKNYVPV 64
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI++ I+ G
Sbjct: 65 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPEEVKEIAIELATLSGGIVLDIQ---DGN 121
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + P+ L++ KAL +S M++ AL ++I LE +E + ++
Sbjct: 122 TIIMYRGKNYAQPPPEIMSPKVSLSRKKALDKSKYMEKLRALRRYIPRLEQELEDLHAQM 181
Query: 770 GVSKDEEDGN 779
++ + + N
Sbjct: 182 KLAGEHQGQN 191
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
PT + EE + G + + V + G+ Q V+ +H W+K + +++
Sbjct: 36 PTHDPEVLTPEEHFYFLKMGQKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFT 95
Query: 279 ATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
++K + +GG+V+ + G+ +++YRG NYA P
Sbjct: 96 PEEVKEIAIELATLSGGIVLDIQDGNTIIMYRGKNYAQP 134
>gi|255585329|ref|XP_002533362.1| conserved hypothetical protein [Ricinus communis]
gi|223526802|gb|EEF29024.1| conserved hypothetical protein [Ricinus communis]
Length = 412
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 143/277 (51%), Gaps = 33/277 (11%)
Query: 583 KAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVP--SGPDYDQETITDEERAMFRR 640
K K A +RI++KL + K++ L+ +++ VP GP+ +T EER ++
Sbjct: 98 KQKFANAEERIKYKL---ERAKIKEALLVERLKRYEVPKVQGPEVKPHDLTGEERFFMKK 154
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
+ + ++PLG RGVF GV+ NMH+HWK E VK+I V + A+ + SGGI
Sbjct: 155 MAQKQSNYVPLGRRGVFGGVILNMHMHWKKHETVKVICNFCKPGQVHEYAQEIARLSGGI 214
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
I +V +IFYRGKNY +P + P + L+K +AL++S Q E++ + I+ E
Sbjct: 215 PI---QVIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEK 271
Query: 761 TIEQMKKEIGVSKDEEDGNI-----------RCSGDL-KQFDHVSV------LPQNEDDD 802
+E + I + D D N+ + SG+L K+ +++S + + EDD
Sbjct: 272 ELELYYRHIALYGDPNDRNLLSVLDSPTNDFKESGELRKESNYLSSHGFAPGVSETEDDS 331
Query: 803 Y------VSDEDFDSEADEDSELSSFESDDNDLSKNG 833
+ DED S ++ DS S +SDD ++ K G
Sbjct: 332 TDSEVSEIEDEDV-SASESDSTDSITDSDDEEIQKEG 367
>gi|357124470|ref|XP_003563923.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Brachypodium distachyon]
Length = 337
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 107/191 (56%), Gaps = 16/191 (8%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P+ +D E +T+EE+ +R G + K ++
Sbjct: 133 RIRYKL---EKAKRKEEWLIEKLRKYEVPRVPEPVHDPEILTEEEKFYLKRTGEKKKNYV 189
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ----KTLAYVEDTARLLEYESGGILIAIE 705
P+G RGVF GVV NMHLHWK E +K++ K + Y E+ ARL S G +I I+
Sbjct: 190 PVGRRGVFGGVVLNMHLHWKKHETMKVVCKPCRPGQVYEYAEELARL----SKGTVIDIK 245
Query: 706 RVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
+IFYRGKNY +P + P + L+K KAL++ Q E SQ I LE +E
Sbjct: 246 ---PNNTIIFYRGKNYVQPKVMSPPDTLSKQKALEKYRYEQSLEHTSQFIEQLEKELEDY 302
Query: 766 KKEIGVSKDEE 776
+K + + K+ +
Sbjct: 303 QKHVILFKNRD 313
>gi|356511313|ref|XP_003524371.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 282
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 94/166 (56%), Gaps = 8/166 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGP--DYDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + L+ K+ VP P YD E +T+EER +R G R K ++
Sbjct: 88 RIRYKL---EKAKRKETWLIEKLRKFDVPKPPPETYDPEILTEEERHYLKRTGERKKHYV 144
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK+I K V + A L S GI+I I+ P
Sbjct: 145 PVGRRGVFGGVVLNMHLHWKNHETVKVICKPCKPGQVHEYAEELARLSKGIVIDIK--PN 202
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHI 755
+IFYRGKNY +P + P N L+KAKAL++ Q E SQ I
Sbjct: 203 N-TIIFYRGKNYVKPEVMSPPNTLSKAKALEKYRYEQSLEHTSQFI 247
>gi|449479099|ref|XP_004155504.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 290
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 620 PSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITK 679
P YD E +T+EE+ +R G + K F+ LG RGVF GVV NMH+HWK E VK+I K
Sbjct: 126 PFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICK 185
Query: 680 QKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKAL 739
V + A L S GI+I I+ P ++IFYRGKNY +P + P N L+K KAL
Sbjct: 186 PCKPGQVHEYAEELTRLSKGIVIDIK--PNN-SIIFYRGKNYVQPEVMSPPNTLSKDKAL 242
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMKKEIG 770
++ Q E SQ I LE +E +K +
Sbjct: 243 EKYKYEQSLEHTSQFIEKLEKELEDFQKHLA 273
>gi|449438181|ref|XP_004136868.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 352
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Query: 620 PSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITK 679
P YD E +T+EE+ +R G + K F+ LG RGVF GVV NMH+HWK E VK+I K
Sbjct: 188 PFVEKYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICK 247
Query: 680 QKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKAL 739
V + A L S GI+I I+ P ++IFYRGKNY +P + P N L+K KAL
Sbjct: 248 PCKPGQVHEYAEELTRLSKGIVIDIK--PNN-SIIFYRGKNYVQPEVMSPPNTLSKDKAL 304
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMKKEIG 770
++ Q E SQ I LE +E +K +
Sbjct: 305 EKYKYEQSLEHTSQFIEKLEKELEDFQKHLA 335
>gi|224128874|ref|XP_002328988.1| predicted protein [Populus trichocarpa]
gi|222839222|gb|EEE77573.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
RI +KL ++ K+ L K+E P G YD E +T+EE+ +R G + K ++P+
Sbjct: 142 RIRYKLEKAKRKEAWLIEKLRKLEVPKTP-GEAYDPEILTEEEKHYLKRTGEKKKNYVPV 200
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GVV NMHLHWK E VK+ K +++ A L S GI I I P
Sbjct: 201 GRRGVFGGVVLNMHLHWKKHETVKVTCKPCKPGQIDEYAEELARLSKGIAIDIR--PDN- 257
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGV 771
+IFYRGKNY +P + P + L+K KAL++ Q E SQ I LE +E ++ +
Sbjct: 258 TIIFYRGKNYVQPKIMSPPDTLSKDKALEKYRYEQSLEHTSQFIEKLEKELENYQEHVVR 317
Query: 772 SKDEEDGNI 780
K+ ++ +
Sbjct: 318 YKNRKEAAV 326
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ +EE L+R G + + V + G+ V+ +H W+K E V++ +
Sbjct: 179 LTEEEKHYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVTCKPCKPGQIDEY 238
Query: 286 HEIVERRTGGLVI-WRAGSVMVVYRGNNYAGPS--SKPQPLDGD 326
E + R + G+ I R + ++ YRG NY P S P L D
Sbjct: 239 AEELARLSKGIAIDIRPDNTIIFYRGKNYVQPKIMSPPDTLSKD 282
>gi|224132018|ref|XP_002321235.1| predicted protein [Populus trichocarpa]
gi|222862008|gb|EEE99550.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 13/241 (5%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +Q K+ R + L KIE S +D E +T EE F ++GL+ K ++P+
Sbjct: 93 KILYKLRKAQRKEERFVQALKKIEPKE-SSEATHDPEILTPEEHFFFLKMGLKCKNYVPV 151
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +K++ K T V++ A L +GGI++ I +
Sbjct: 152 GRRGIYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGGIVLDIH---EEN 208
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + + PR L++ KAL +S AL ++I L+ +E +
Sbjct: 209 TIIMYRGKNYSQPPTEIMSPRVTLSRKKALDKSKCRDGLRALRRYIPRLQQDLELLHARA 268
Query: 770 GVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESDDNDL 829
G K + DG S KQ ++ L + + +D SE D++L SD DL
Sbjct: 269 G-GKTDIDGAESRSISSKQLENSEKLKE-----IIDRQDEGSEDGPDTDL-GIASDSEDL 321
Query: 830 S 830
S
Sbjct: 322 S 322
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 236 RNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGG 295
+ G+ + + V + G+ Q V+ +H W+K + +++ ++K + R TGG
Sbjct: 140 KMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFTPEEVKEIAAELARFTGG 199
Query: 296 LVI-WRAGSVMVVYRGNNYAGPSS 318
+V+ + +++YRG NY+ P +
Sbjct: 200 IVLDIHEENTIIMYRGKNYSQPPT 223
>gi|115442347|ref|NP_001045453.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|57900096|dbj|BAD88158.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900276|dbj|BAD87109.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|113534984|dbj|BAF07367.1| Os01g0958400 [Oryza sativa Japonica Group]
gi|215768161|dbj|BAH00390.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189771|gb|EEC72198.1| hypothetical protein OsI_05277 [Oryza sativa Indica Group]
gi|222619906|gb|EEE56038.1| hypothetical protein OsJ_04827 [Oryza sativa Japonica Group]
Length = 415
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R+++K+ ++ K+ L K E + GP Q+ + EER ++V + ++P+
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKA-QGPMAKQDDLDGEERFYLKKVSQKKSNYVPV 193
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GV+ NMHLHWK E VK+I K +++ A + SGGI I
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPI---NTIGND 250
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGV 771
++FYRGKNY +P + P + L+K KAL++S Q E + + I+ E +E + I +
Sbjct: 251 TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIAL 310
Query: 772 SKDEEDGNI-------RCSGDLK-----QFDHVSVLPQNEDDDYVSDEDFDSEADEDSEL 819
+ + N+ R + LK Q +S + D+D SD SE+DE++
Sbjct: 311 YGNPQSQNVDPVYCDDRRAASLKMEEPSQGKDLSHM----DNDGFSDITDASESDEEANP 366
Query: 820 SSFESDDNDLSKN 832
S ++ +D++ N
Sbjct: 367 SEYDDNDDETGDN 379
>gi|357439975|ref|XP_003590265.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479313|gb|AES60516.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 443
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 132/264 (50%), Gaps = 31/264 (11%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
RI +KL ++ K+ R L KIE + S +D E +T EE F ++GL+ K ++P+
Sbjct: 121 RILYKLLKARKKEERLREALKKIEPTE-SSETIHDPEILTPEEHFFFLKMGLKSKNYVPV 179
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K + V++ A L +GGI++ I
Sbjct: 180 GRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEED--- 236
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + + PR L + KAL +S A+ ++I LE +E ++ +
Sbjct: 237 TIIMYRGKNYSQPPTEIMSPRVTLPRKKALDKSKYRDGLRAVRRYIPKLEQELEILRAQF 296
Query: 770 GVSKDEEDGNIRCSGDLKQFDHVSVLPQN----------------------EDDDYVSDE 807
+ + N + ++ D VSV P + +D+ D
Sbjct: 297 ---QSTAESNTEAAEGIQISDKVSVEPSSVSNLQLEKLDKVGAMFNDNNSCSEDEAHMDS 353
Query: 808 DFDSEADEDSELSSFESDDNDLSK 831
D DS +D+ S++ +SD DL K
Sbjct: 354 DLDSYSDKLSDIFETDSDTEDLVK 377
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 219 PTLAELTIED------EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRL 272
PT + TI D EE + G+ + + V + G+ Q V+ +H W+K + +++
Sbjct: 145 PTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQV 204
Query: 273 KFHEVLATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
A ++K + R TGG+V+ +++YRG NY+ P
Sbjct: 205 VVKTFSAEEVKEIATELARLTGGIVLGIHEEDTIIMYRGKNYSQP 249
>gi|57900098|dbj|BAD88160.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900278|dbj|BAD87111.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
Length = 394
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R+++K+ ++ K+ L K E + GP Q+ + EER ++V + ++P+
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKA-QGPMAKQDDLDGEERFYLKKVSQKKSNYVPV 193
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GV+ NMHLHWK E VK+I K +++ A + SGGI I
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPI---NTIGND 250
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGV 771
++FYRGKNY +P + P + L+K KAL++S Q E + + I+ E +E + I +
Sbjct: 251 TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIAL 310
Query: 772 SKDEEDGNI-------RCSGDLK-----QFDHVSVLPQNEDDDYVSDEDFDSEADEDSEL 819
+ + N+ R + LK Q +S + D+D SD SE+DE++
Sbjct: 311 YGNPQSQNVDPVYCDDRRAASLKMEEPSQGKDLSHM----DNDGFSDITDASESDEEANP 366
Query: 820 SSFESDDNDLSKN 832
S ++ +D++ N
Sbjct: 367 SEYDDNDDETGDN 379
>gi|125555042|gb|EAZ00648.1| hypothetical protein OsI_22670 [Oryza sativa Indica Group]
Length = 304
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 95/173 (54%), Gaps = 8/173 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P+ +D E +T+EE+ +R G + K ++
Sbjct: 121 RIRYKL---EKAKRKEEWLIEKLRKYEVPRSPEPVHDPEILTEEEKFYLKRTGEKKKNYV 177
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF GVV NMHLHWK E VK+I K V + A L S G +I I+
Sbjct: 178 PVGRRGVFGGVVLNMHLHWKKHETVKVICKPCRPGQVYEYAEELTRLSKGTVIDIK---P 234
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTI 762
+IFYRGKNY +P + P + L+K K K Q+H AL ++ + TI
Sbjct: 235 NNTIIFYRGKNYVQPKVMSPPDTLSKQKLEKELEDYQKHVALFKNRGETLETI 287
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 419 LTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 478
LT E L+R + +GR G+ + + W+K K+ K +
Sbjct: 158 LTEEEKFYLKRTGEKKKNYVPVGRRGVFGGVVLNMHLHWKKHETVKVICK-PCRPGQVYE 216
Query: 479 MAEELKSLTGGTLLQ-RNKFYIVLYRGKDFLPPNVASA--LAEREQCAKQIQDVEEKV-- 533
AEEL L+ GT++ + I+ YRGK+++ P V S +++ K+++D ++ V
Sbjct: 217 YAEELTRLSKGTVIDIKPNNTIIFYRGKNYVQPKVMSPPDTLSKQKLEKELEDYQKHVAL 276
Query: 534 ---RSKTLEATPSGET 546
R +TLE S ET
Sbjct: 277 FKNRGETLETISSEET 292
>gi|57900097|dbj|BAD88159.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|57900277|dbj|BAD87110.1| group II intron splicing factor CRS1-like [Oryza sativa Japonica
Group]
gi|215695021|dbj|BAG90212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 417
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 128/253 (50%), Gaps = 20/253 (7%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R+++K+ ++ K+ L K E + GP Q+ + EER ++V + ++P+
Sbjct: 135 RLKYKIEKAKLKEAMLVEKLKKYEIAKA-QGPMAKQDDLDGEERFYLKKVSQKKSNYVPV 193
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GV+ NMHLHWK E VK+I K +++ A + SGGI I
Sbjct: 194 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGIPI---NTIGND 250
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGV 771
++FYRGKNY +P + P + L+K KAL++S Q E + + I+ E +E + I +
Sbjct: 251 TIVFYRGKNYVQPDVMSPVDTLSKKKALEKSKYEQSLETVRRFIAVSEKELELYYRHIAL 310
Query: 772 SKDEEDGNI-------RCSGDLK-----QFDHVSVLPQNEDDDYVSDEDFDSEADEDSEL 819
+ + N+ R + LK Q +S + D+D SD SE+DE++
Sbjct: 311 YGNPQSQNVDPVYCDDRRAASLKMEEPSQGKDLSHM----DNDGFSDITDASESDEEANP 366
Query: 820 SSFESDDNDLSKN 832
S ++ +D++ N
Sbjct: 367 SEYDDNDDETGDN 379
>gi|125590852|gb|EAZ31202.1| hypothetical protein OsJ_15301 [Oryza sativa Japonica Group]
Length = 484
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 31/265 (11%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL +++ K+ R L KIE PS P +D E +T EE F ++G + K ++P+
Sbjct: 142 KILYKLKLARNKEERLVAALTKIEPDD-PSEPTHDPEVLTPEEHFYFLKMGQKSKNYVPV 200
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +++I K T V++ A L SGGI++ I+ +G
Sbjct: 201 GRRGIYQGVILNMHLHWKKHQTLQVIVKTFTPDEVKEIASELARLSGGIVLDIQ---EGN 257
Query: 712 ALIFYRGKNYRRPIS--LRPRNLL--TKAKALKRSVAMQRHE---ALSQHISDLENTIEQ 764
+I YRGKNY +P + P+ L K K L+ + AL ++I LE +
Sbjct: 258 TIIMYRGKNYAQPPPEIMSPKVTLPRKKWKVLQHWINQNTENASRALRRYIPRLEQELVD 317
Query: 765 MKKEIGVSKDEEDGN----IRCSGD------LKQFDHVSVLPQNEDD---------DYVS 805
+ ++ +++D + N I C D K++ SV ++ D +
Sbjct: 318 LHAQMKLARDYKGQNAAEDITCISDSVNSTSAKEYSSCSVRKRSVSDLLSESIEGSGRLE 377
Query: 806 DEDFDSEADEDSELSSFESDDNDLS 830
DE+++ AD SE ++ S+ DLS
Sbjct: 378 DENYEVSADSASESITY-SESEDLS 401
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
PT + EE + G + + V + G+ Q V+ +H W+K + +++
Sbjct: 172 PTHDPEVLTPEEHFYFLKMGQKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVIVKTFT 231
Query: 279 ATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
++K + R +GG+V+ + G+ +++YRG NYA P
Sbjct: 232 PDEVKEIASELARLSGGIVLDIQEGNTIIMYRGKNYAQP 270
>gi|297822421|ref|XP_002879093.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
gi|297324932|gb|EFH55352.1| hypothetical protein ARALYDRAFT_901658 [Arabidopsis lyrata subsp.
lyrata]
Length = 345
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 27/251 (10%)
Query: 569 VSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQE 628
V+AEER K E +K K A L+++++ R E +AK++ GP+
Sbjct: 119 VNAEERIKYKLEKAKIKEALLIEKLK-----------RYE--VAKVQ------GPEVRPH 159
Query: 629 TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVED 688
IT EER +++G + ++P+G RGVF GV+ NMHLHWK E VK+I V+
Sbjct: 160 EITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQ 219
Query: 689 TARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRH 748
A L SGG+ + I +IFYRGK Y +P + P + L+K +A ++S Q
Sbjct: 220 YAEELAKLSGGVPVNI---IGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSL 276
Query: 749 EALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNEDDD-YVSDE 807
E++ I+ E +E + + + D + N D D S Q+ D++ Y+S
Sbjct: 277 ESVRHSIAIAEKELELYYRHVALYDDPNNRNPLSILD----DSPSESRQHHDNELYLSCL 332
Query: 808 DFDSEADEDSE 818
D D+ ++++ E
Sbjct: 333 DTDANSEDEGE 343
>gi|359478175|ref|XP_002266278.2| PREDICTED: uncharacterized protein LOC100250974 [Vitis vinifera]
Length = 711
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 561 AQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVP 620
+K+ R +AEER K E ++ K A L++R+ K+ +L
Sbjct: 404 GKKKKQRFANAEERIKFKLEKARIKEALLIERL---------KRYEVPKL---------- 444
Query: 621 SGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQ 680
GP +T EER +++ + ++P+G RGVF GV+ NMH+HWK E VK+I K
Sbjct: 445 QGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICKP 504
Query: 681 KTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALK 740
V + A + SGG I ++ +IFYRGKNY +P + P + L+K +AL+
Sbjct: 505 CKPGQVHEYANEIARLSGGTPI---QIIGDDTIIFYRGKNYVQPEVMSPIDTLSKKRALE 561
Query: 741 RSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGN 779
+S Q E++ + I+ E +E + I + D D N
Sbjct: 562 KSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPSDRN 600
>gi|242055631|ref|XP_002456961.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
gi|241928936|gb|EES02081.1| hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
Length = 405
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 32/268 (11%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R+++K+ ++ K++R L K E + GP + ++ EER ++V + ++P+
Sbjct: 136 RLKYKIEKAKLKEVRLVEKLKKYEVAKA-QGPMAKPDDLSGEERFYLKKVSQKKSNYVPV 194
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GV+ NMHLHWK E VK+I K +++ A + SGGI + I
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPVNI---IGDD 251
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIG- 770
++FYRGKNY +P + P + L+K KAL++S Q E + + I+ E +E + +
Sbjct: 252 TIVFYRGKNYVQPEVMSPIDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVAL 311
Query: 771 -----------VSKDEEDGNIRCSGDLKQF--------------DHVSVLPQNEDDDYVS 805
V D+ + ++ G L Q HVS + +++++D S
Sbjct: 312 YGNPQSQKADLVCGDDRETSLLKMGGLDQGKDQEPHLATNHFSDHHVSDVSESDEED-SS 370
Query: 806 DEDFDSEADEDSELSSFESDDNDLSKNG 833
++D DE ++S S+D+ +S +G
Sbjct: 371 GSEYDVNDDETESITSI-SEDSIVSDHG 397
>gi|15226402|ref|NP_180415.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|4510396|gb|AAD21483.1| hypothetical protein [Arabidopsis thaliana]
gi|44917583|gb|AAS49116.1| At2g28480 [Arabidopsis thaliana]
gi|110741747|dbj|BAE98819.1| hypothetical protein [Arabidopsis thaliana]
gi|330253035|gb|AEC08129.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 372
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 22/211 (10%)
Query: 569 VSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQE 628
V+AEER K E +K K A L++R++ R E +AK++ GP+
Sbjct: 122 VNAEERIKYKLEKAKIKEALLIERLK-----------RYE--VAKVQ------GPEVRPH 162
Query: 629 TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVED 688
IT EER +++G + ++P+G RGVF GV+ NMHLHWK E VK+I V+
Sbjct: 163 EITGEERFYLKKMGQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQ 222
Query: 689 TARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRH 748
A L SGG+ + I +IFYRGK Y +P + P + L+K +A ++S Q
Sbjct: 223 YAEELAKLSGGVPVNI---IGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSL 279
Query: 749 EALSQHISDLENTIEQMKKEIGVSKDEEDGN 779
E++ I+ E +E + + + D + N
Sbjct: 280 ESVRHFIAIAEKELELYYRHVALYDDPNNRN 310
>gi|147820521|emb|CAN67658.1| hypothetical protein VITISV_012474 [Vitis vinifera]
Length = 375
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMV 619
+ +K+ R +AEER K E ++ K A L++R+ K+ +L
Sbjct: 67 KGKKKKQRFANAEERIKFKLEKARIKEALLIERL---------KRYEVPKL--------- 108
Query: 620 PSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITK 679
GP +T EER +++ + ++P+G RGVF GV+ NMH+HWK E VK+I K
Sbjct: 109 -QGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICK 167
Query: 680 QKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKAL 739
V + A + SGG I I +IFYRGKNY +P + P + L+K +AL
Sbjct: 168 PCKPGQVHEYANEIARLSGGTPIQI---IGDDTIIFYRGKNYVQPEXMSPIDTLSKKRAL 224
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGN 779
++S Q E++ + I+ E +E + I + D D N
Sbjct: 225 EKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPSDRN 264
>gi|449437795|ref|XP_004136676.1| PREDICTED: uncharacterized protein LOC101208777 [Cucumis sativus]
gi|449494725|ref|XP_004159629.1| PREDICTED: uncharacterized LOC101208777 [Cucumis sativus]
Length = 431
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 4/206 (1%)
Query: 574 REKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDE 633
R+ V+ K K +RI++KL ++ K+ L + E V GP +T E
Sbjct: 113 RQLRVKGKKKQKFPNAAERIKNKLENARIKEALLIERLRRYEVPKV-QGPMVKPHDLTGE 171
Query: 634 ERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLL 693
ER +++G + ++P+G RGVF GV+ NMH+HWK E VK+ K V + A+ +
Sbjct: 172 ERFYIKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEI 231
Query: 694 EYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQ 753
SGGI I ++ +IFYRGK+Y +P + P + L+K +AL++S Q E++ +
Sbjct: 232 ARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRR 288
Query: 754 HISDLENTIEQMKKEIGVSKDEEDGN 779
I+ E +E + I + D D N
Sbjct: 289 FIAIAEKELELYYRHIALYGDPNDRN 314
>gi|356501797|ref|XP_003519710.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Glycine max]
Length = 382
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 130/243 (53%), Gaps = 10/243 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL ++ K+ R L KIE + S +D E +T EE F ++GL+ K ++P+
Sbjct: 81 KILYKLLKARKKEERLCEALKKIEPAE-SSETTHDPEILTPEEHFFFLKMGLKSKNYVPV 139
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + +K++ K + V++ A L SGGI++ I +
Sbjct: 140 GRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLSGGIVLDIH---EDN 196
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + + PR L++ KAL +S A+ +HI LE +E ++ +
Sbjct: 197 TIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRHIPRLEQELEILRAQF 256
Query: 770 GVSKDEE-DGNIRCSGDLKQFDHVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESDDND 828
S + D + ++ + ++E D + + DS++D+ S++ +SD +
Sbjct: 257 KSSAESNTDAAEAIQNNRERMNDNIGCTEDETD---MNSELDSDSDKLSDIFETDSDTEN 313
Query: 829 LSK 831
K
Sbjct: 314 FIK 316
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ A ++K + R +GG+V
Sbjct: 130 GLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIATELARLSGGIV 189
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ + +++YRG NY+ P
Sbjct: 190 LDIHEDNTIIMYRGKNYSQP 209
>gi|297743805|emb|CBI36688.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMV 619
+ +K+ R +AEER K E ++ K A L++R+ K+ +L
Sbjct: 24 KGKKKKQRFANAEERIKFKLEKARIKEALLIERL---------KRYEVPKL--------- 65
Query: 620 PSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITK 679
GP +T EER +++ + ++P+G RGVF GV+ NMH+HWK E VK+I K
Sbjct: 66 -QGPIVQPVNLTGEERFYMKKMAQKRSNYVPVGRRGVFGGVILNMHMHWKKHETVKVICK 124
Query: 680 QKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKAL 739
V + A + SGG I I +IFYRGKNY +P + P + L+K +AL
Sbjct: 125 PCKPGQVHEYANEIARLSGGTPIQI---IGDDTIIFYRGKNYVQPEVMSPIDTLSKKRAL 181
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGN 779
++S Q E++ + I+ E +E + I + D D N
Sbjct: 182 EKSKYEQSLESVRRFIAIAEKELELYYRHIALYGDPSDRN 221
>gi|255572670|ref|XP_002527268.1| conserved hypothetical protein [Ricinus communis]
gi|223533361|gb|EEF35112.1| conserved hypothetical protein [Ricinus communis]
Length = 458
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 102/177 (57%), Gaps = 6/177 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
++ +KL +Q K+ R + L KIE + S +D E +T EE F ++GL+ K ++P+
Sbjct: 134 KLLYKLKKAQKKEERYVQALKKIEP-VDSSETTHDPEILTPEEHFFFLKMGLKCKNYVPV 192
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + V+++ K + V++ A L +GGI++ I +
Sbjct: 193 GRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAELARLTGGIVLDIH---EEN 249
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
+I YRGKNY +P + + PR L++ KAL +S A+ +I LE +E +K
Sbjct: 250 TIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRNYIPRLEQDLELLK 306
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE + G+ + + V + G+ Q V+ +H W+K + V++ ++K
Sbjct: 174 EEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVKEIAAE 233
Query: 289 VERRTGGLVI-WRAGSVMVVYRGNNYAGPSS 318
+ R TGG+V+ + +++YRG NY+ P +
Sbjct: 234 LARLTGGIVLDIHEENTIIMYRGKNYSQPPT 264
>gi|5123948|emb|CAB45506.1| putative protein [Arabidopsis thaliana]
gi|7268009|emb|CAB78349.1| putative protein [Arabidopsis thaliana]
Length = 332
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 21/174 (12%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P YD E++T+EE+ +R G + K F+
Sbjct: 134 RIRYKL---EKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFV 190
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ-----KTLAYVEDTARLLEYESGGILIAI 704
+G RGVF GVV N+HLHWK E VK+I K + Y E+ ARL S GI+I +
Sbjct: 191 LVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARL----SKGIVIDV 246
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
+ P ++ YRGKNY RP + P + L+K KAL++ R+E +H S+
Sbjct: 247 K--PNN-TIVLYRGKNYVRPEVMSPVDTLSKDKALEK----YRYEQSLEHTSEF 293
>gi|326507158|dbj|BAJ95656.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 115
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 55/78 (70%)
Query: 364 TEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAE 423
T E E N LLDSLGPRF +WW LPVDADLLP V G+KTPFR P G+R L + E
Sbjct: 18 TVYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEE 77
Query: 424 MTDLRRLARSLPCHFALG 441
+T LR+LAR LP HFALG
Sbjct: 78 LTYLRKLARPLPTHFALG 95
>gi|42566743|ref|NP_193043.2| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|51968644|dbj|BAD43014.1| putative protein [Arabidopsis thaliana]
gi|51971084|dbj|BAD44234.1| putative protein [Arabidopsis thaliana]
gi|51971893|dbj|BAD44611.1| putative protein [Arabidopsis thaliana]
gi|63003852|gb|AAY25455.1| At4g13070 [Arabidopsis thaliana]
gi|115646846|gb|ABJ17138.1| At4g13070 [Arabidopsis thaliana]
gi|332657826|gb|AEE83226.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 343
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 21/174 (12%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP P YD E++T+EE+ +R G + K F+
Sbjct: 145 RIRYKL---EKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQHYLKRTGEKRKNFV 201
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ-----KTLAYVEDTARLLEYESGGILIAI 704
+G RGVF GVV N+HLHWK E VK+I K + Y E+ ARL S GI+I +
Sbjct: 202 LVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARL----SKGIVIDV 257
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
+ P ++ YRGKNY RP + P + L+K KAL++ R+E +H S+
Sbjct: 258 K--PNN-TIVLYRGKNYVRPEVMSPVDTLSKDKALEK----YRYEQSLEHTSEF 304
>gi|326494498|dbj|BAJ90518.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326502328|dbj|BAJ95227.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 95
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 55/78 (70%)
Query: 364 TEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAE 423
T E E N LLDSLGPRF +WW LPVDADLLP V G+KTPFR P G+R L + E
Sbjct: 18 TVYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEE 77
Query: 424 MTDLRRLARSLPCHFALG 441
+T LR+LAR LP HFALG
Sbjct: 78 LTYLRKLARPLPTHFALG 95
>gi|226509977|ref|NP_001151028.1| CFM6 [Zea mays]
gi|195643764|gb|ACG41350.1| CFM6 [Zea mays]
gi|238011754|gb|ACR36912.1| unknown [Zea mays]
Length = 394
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 128/250 (51%), Gaps = 18/250 (7%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
R+++K+ ++ K+ R L K E + GP + ++ EER ++V + ++P+
Sbjct: 136 RLKYKIEKAKLKEARLVEKLKKYEIAKA-QGPMAKVDDLSGEERFYLKKVSQKKSNYVPV 194
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RGVF GV+ NMHLHWK E VK+I K +++ A + SGGI + V
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYANEIARLSGGIPV---NVIGDD 251
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI-- 769
++FYRGK+Y +P + P + L+K KAL++S Q E + + I+ E +E + +
Sbjct: 252 TIVFYRGKSYVQPEVMSPVDTLSKKKALEKSKYEQSLETVRRFIAISEKELELYYRHVAL 311
Query: 770 -GVSKDEEDGNIRCSGD-------LKQFDHVSVLPQNEDDDYVSD---EDFDSEADEDSE 818
G+S+ ++ ++ C D ++ D + ++ SD D +EDS
Sbjct: 312 YGISQSQK-SDLVCGDDREASLLKMEGLDRGKGQEPHLATNHFSDLHIGDVSESDEEDSS 370
Query: 819 LSSFESDDND 828
S +++DD+D
Sbjct: 371 GSEYDADDDD 380
>gi|356544514|ref|XP_003540695.1| PREDICTED: uncharacterized protein LOC100796393 [Glycine max]
Length = 426
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 137/281 (48%), Gaps = 36/281 (12%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMV 619
+ +K+ R AEER K E ++ K A L++R++ + V +A+
Sbjct: 121 KGKKKKQRFACAEERIKYKIEKARIKEALLIERLK-RYEVPKAQ---------------- 163
Query: 620 PSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITK 679
GP + +T EER +++ + +L +G RG+F GVV NMH+HWK E VK+ K
Sbjct: 164 --GPVVKPDDLTGEERFYLKKMAQKRSNYLQIGRRGLFGGVVLNMHMHWKKHETVKVFCK 221
Query: 680 QKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKAL 739
V + A+ L SGGI + I +IFYRGKNY +P + P + L+K KAL
Sbjct: 222 PCKPGQVHEYAQELARLSGGIPLQI---IGDDTIIFYRGKNYEQPEVMSPIDTLSKKKAL 278
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVLPQNE 799
++S Q E++ + I+ E +E + + + D + N L D S + +
Sbjct: 279 EKSKYEQSLESVRRFIAIAEKELELYCRHVALYGDPNNRN-----PLSMMDGPSGNSKEK 333
Query: 800 DDDYVSDEDFD---SEADEDS---ELSSFES--DDNDLSKN 832
+ +SD DF SE + DS ELS E +D ++S N
Sbjct: 334 GNHGISD-DFSVSLSETEADSTEMELSEIEDSLEDENMSMN 373
>gi|356498434|ref|XP_003518057.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like, partial [Glycine max]
Length = 383
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 102/180 (56%), Gaps = 6/180 (3%)
Query: 595 HKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIR 654
+KL ++ K+ R L KIE + S +D E +T EE F ++GL+ K ++P+G R
Sbjct: 64 YKLLKARKKEERLCEALKKIEPAE-SSETTHDPEILTPEEHFFFLKMGLKSKNYVPVGRR 122
Query: 655 GVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALI 714
G++ GV+ NMHLHWK + +K++ K + V++ A L SGGI++ I + +I
Sbjct: 123 GIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIVLDIH---EDNTII 179
Query: 715 FYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEIGVS 772
YRGKNY +P + + PR L++ KAL +S A+ ++I LE +E ++ + S
Sbjct: 180 MYRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDALRAVRRYIPRLEQELEILRAQFKSS 239
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ A ++K + R +GG+V
Sbjct: 110 GLKSKNYVPVGRRGIYQGVILNMHLHWKKHQTLKVVVKTFSAEEVKEIAAELARLSGGIV 169
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ + +++YRG NY+ P
Sbjct: 170 LDIHEDNTIIMYRGKNYSQP 189
>gi|255567361|ref|XP_002524660.1| conserved hypothetical protein [Ricinus communis]
gi|223536021|gb|EEF37679.1| conserved hypothetical protein [Ricinus communis]
Length = 260
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 96/180 (53%), Gaps = 30/180 (16%)
Query: 580 EASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFR 639
E +K K A L++ KL+ + KLRAE D E +T+EE+ +
Sbjct: 75 EKAKRKEAWLIE----KLSKFEVPKLRAETC---------------DPEMLTEEEKHYLK 115
Query: 640 RVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQ----KTLAYVEDTARLLEY 695
R G + K F+ +G RGVF GVV NMHLHWK E VK+I K + Y E+ ARL
Sbjct: 116 RTGEKKKNFILVGRRGVFGGVVLNMHLHWKKHETVKIICKPCKPGQIHQYAEELARL--- 172
Query: 696 ESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHI 755
S GI+I I P ++IFYRGKNY +P + P + L+K KAL++ Q E SQ I
Sbjct: 173 -SKGIVIDIR--PNN-SIIFYRGKNYVQPTVMSPPDTLSKNKALEKYKYEQSLEHTSQFI 228
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 215 RMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKF 274
+++A T + +EE L+R G + I V + G+ V+ +H W+K E V++
Sbjct: 95 KLRAETCDPEMLTEEEKHYLKRTGEKKKNFILVGRRGVFGGVVLNMHLHWKKHETVKIIC 154
Query: 275 HEVLATDMKTAHEIVERRTGGLVI-WRAGSVMVVYRGNNYAGPSSKPQP 322
+ E + R + G+VI R + ++ YRG NY P+ P
Sbjct: 155 KPCKPGQIHQYAEELARLSKGIVIDIRPNNSIIFYRGKNYVQPTVMSPP 203
>gi|297790600|ref|XP_002863185.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309019|gb|EFH39444.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 98/174 (56%), Gaps = 21/174 (12%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVP--SGPDYDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + E L+ K+ VP S YD E++T+EE+ +R G + K F+
Sbjct: 145 RIRYKL---EKAKRKEEWLIEKLRKYDVPKSSAEPYDPESLTEEEQHYLKRTGEKRKNFV 201
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQ-----KTLAYVEDTARLLEYESGGILIAI 704
+G RGVF GVV N+HLHWK E VK+I K + Y E+ ARL S GI+I +
Sbjct: 202 LVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELARL----SKGIVIDV 257
Query: 705 ERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDL 758
+ P ++ YRGKNY RP + P + L+K KAL++ R+E +H S+
Sbjct: 258 K--PNN-TIVLYRGKNYVRPEVMSPVDTLSKDKALEK----YRYEQSLEHTSEF 304
>gi|326506924|dbj|BAJ91503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 54/77 (70%)
Query: 364 TEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLLPTGMRSRLTNAE 423
T E E N LLDSLGPRF +WW LPVDADLLP V G+KTPFR P G+R L + E
Sbjct: 18 TVYEREVNRLLDSLGPRFVDWWWNTPLPVDADLLPEVVPGFKTPFRQCPPGVRPTLADEE 77
Query: 424 MTDLRRLARSLPCHFAL 440
+T LR+LAR LP HFAL
Sbjct: 78 LTYLRKLARPLPTHFAL 94
>gi|9279724|dbj|BAB01314.1| unnamed protein product [Arabidopsis thaliana]
Length = 1115
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 116/213 (54%), Gaps = 19/213 (8%)
Query: 564 RWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGP 623
RW ++ +E E+M E ++I +KL ++ K+ R + K+E S +
Sbjct: 796 RWKKK---KEFERMTSE----------EKILNKLRKARKKEERLMETMKKLEPSE-SAET 841
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
+D E +T EE + ++GL+ K ++P+G RG++ GV+ NMHLHWK + ++++ K T
Sbjct: 842 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 901
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS--LRPRNLLTKAKALKR 741
V++ A L +GGI++ + +G +I YRGKNY +P + + PR L + KAL +
Sbjct: 902 DEVKEIAVELARLTGGIVLDVH---EGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 958
Query: 742 SVAMQRHEALSQHISDLENTIEQMKKEIGVSKD 774
S A+ ++I LE ++ ++ + +D
Sbjct: 959 SKCRDALRAVRKYIPRLEQELQLLQAQAETKRD 991
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ ++K + R TGG+V
Sbjct: 860 GLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIV 919
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ G+ +++YRG NY P
Sbjct: 920 LDVHEGNTIIMYRGKNYVQP 939
>gi|449458069|ref|XP_004146770.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
gi|449516505|ref|XP_004165287.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Cucumis sativus]
Length = 500
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 19/201 (9%)
Query: 564 RWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGP 623
RW ++ +E E+M E ++I K+ ++ K+ R L KIE + S
Sbjct: 159 RWKKK---KEYERMTSE----------EKILFKMNKARKKEKRLVEALEKIEPA-DSSDT 204
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
+D E +T EE F ++G++ K ++P+G RG++ GV+ NMHLHWK + VK++ K +
Sbjct: 205 THDPEILTPEEHFYFLKMGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSP 264
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS--LRPRNLLTKAKALKR 741
V++ A L +GG+++ I +I YRGKNY +P + + PR L++ KAL +
Sbjct: 265 EEVKEIAAELARLTGGLVLDIHEED---TIIMYRGKNYSQPPTEIMSPRVSLSRKKALDK 321
Query: 742 SVAMQRHEALSQHISDLENTI 762
S A+ +HI LE +
Sbjct: 322 SKYRDGLRAVRKHIPKLEQEL 342
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE + G+ + + V + G+ Q V+ +H W+K + V++ ++K
Sbjct: 214 EEHFYFLKMGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAE 273
Query: 289 VERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
+ R TGGLV+ +++YRG NY+ P
Sbjct: 274 LARLTGGLVLDIHEEDTIIMYRGKNYSQP 302
>gi|297739537|emb|CBI29719.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL ++ K+ R L KIE S +D E +T EE F ++GL+ K ++P+
Sbjct: 6 KILYKLRKARRKEERLAEALTKIEPKE-SSETTHDPEILTPEEHFFFLKMGLKCKNYVPI 64
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K + V++ A L +GGI++ I +
Sbjct: 65 GRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIH---EEN 121
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
+I YRGKNY +P + + PR L++ KAL +S A+ ++I LE +E ++
Sbjct: 122 TIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQ 178
>gi|357131757|ref|XP_003567501.1| PREDICTED: uncharacterized protein LOC100829186 [Brachypodium
distachyon]
Length = 402
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 126/254 (49%), Gaps = 38/254 (14%)
Query: 591 KRIEHKLAVSQAK--------KLRAERLLAKIEASMVPS--GPDYDQETITDEERAMFRR 640
K+I+ K ++A+ KL+ L+ K++ V GP + + EER ++
Sbjct: 126 KKIKQKFPTAEARLKYKIEKAKLKEAMLIEKLKRYEVAKAEGPVAKPDDLNGEERFYLKK 185
Query: 641 VGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGI 700
V + ++P+G RGVF GV+ NMHLHWK E VK+I K +++ A + SGG+
Sbjct: 186 VSQKKSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICKPCKPGQIQEYASEIARLSGGV 245
Query: 701 LIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLEN 760
I I ++FYRGK+Y +P + P + L+K KAL++ S E
Sbjct: 246 PINIV---GNDTVVFYRGKDYVQPDVMSPIDTLSKKKALEK--------------SKYEQ 288
Query: 761 TIEQMKKEIGVSKDEEDGNIRCSGDLKQFDHVSVL--PQNEDDDYVSDEDFDSEADEDSE 818
++E +++ I VS+ E + + HV++ PQ+++ D + +D + + E E
Sbjct: 289 SLETVRRFIAVSEKELE---------LYYQHVALYGKPQSQNADLIYGDDRKASSREMEE 339
Query: 819 LSSFESDDNDLSKN 832
L+ + + L+ N
Sbjct: 340 LNHGKDQGSILASN 353
>gi|224095670|ref|XP_002310431.1| predicted protein [Populus trichocarpa]
gi|222853334|gb|EEE90881.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 17/197 (8%)
Query: 574 REKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVP--SGPDYDQETIT 631
R V+ K A + +RI+ KL + +++ +L+ +++ VP GP+ +T
Sbjct: 58 RSLTVKRKKGQKFANVEERIKTKL---ERARIKEAKLVERLKRYEVPKMQGPEVKPHELT 114
Query: 632 DEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQ-----KTLAYV 686
EER +++ + ++P+G RGVF GV+ NMH+HWK E VK+I + +
Sbjct: 115 GEERFFMKKMAQKKSNYVPIGRRGVFGGVILNMHMHWKKHETVKVICNSSCKPGQVQEFA 174
Query: 687 EDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQ 746
++ ARL SGGI I I +IFYRGKNY +P + P + L+K KAL++S Q
Sbjct: 175 QEIARL----SGGIPIQI---IGDDTVIFYRGKNYVQPKVMSPVDTLSKKKALEKSKYEQ 227
Query: 747 RHEALSQHISDLENTIE 763
E + I+ E +E
Sbjct: 228 SLETVRHFIAIAEKELE 244
>gi|297831446|ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329445|gb|EFH59864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1055
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 113/207 (54%), Gaps = 19/207 (9%)
Query: 564 RWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGP 623
RW ++ +E E+M E ++I +KL ++ K+ R + K+E S +
Sbjct: 739 RWKKK---KEFERMTAE----------EKILNKLTKARKKEERLMETMKKLEPSE-SAET 784
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
+D E +T EE + ++GL+ K ++P+G RG++ GV+ NMHLHWK + ++++ K T
Sbjct: 785 THDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTP 844
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPIS--LRPRNLLTKAKALKR 741
V + A L +GGI++ + +G +I YRGKNY +P + + PR L + KAL +
Sbjct: 845 DEVNEIAVELARLTGGIVLDVH---EGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDK 901
Query: 742 SVAMQRHEALSQHISDLENTIEQMKKE 768
S A+ ++I LE ++ ++ +
Sbjct: 902 SKCRDALRAVRKYIPRLEQELQLLQAQ 928
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ ++ + R TGG+V
Sbjct: 803 GLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVNEIAVELARLTGGIV 862
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ G+ +++YRG NY P
Sbjct: 863 LDVHEGNTIIMYRGKNYVQP 882
>gi|145332683|ref|NP_001078207.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|332643491|gb|AEE77012.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 380
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL ++ K+ R + K+E S + +D E +T EE + ++GL+ K ++P+
Sbjct: 76 KILNKLRKARKKEERLMETMKKLEPSE-SAETTHDPEILTPEEHFYYLKMGLKCKNYVPV 134
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K T V++ A L +GGI++ V +G
Sbjct: 135 GRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLD---VHEGN 191
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + + PR L + KAL +S A+ ++I LE ++ ++ +
Sbjct: 192 TIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQA 251
Query: 770 GVSKD 774
+D
Sbjct: 252 ETKRD 256
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ ++K + R TGG+V
Sbjct: 125 GLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIV 184
Query: 298 I-WRAGSVMVVYRGNNYAGPSSKPQPLDGDGDTLFVPHVSSTDGSTAR 344
+ G+ +++YRG NY P P + + +P + D S R
Sbjct: 185 LDVHEGNTIIMYRGKNYVQP-----PTEIMSPRITLPRKKALDKSKCR 227
>gi|225448146|ref|XP_002263852.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Vitis vinifera]
Length = 401
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 101/177 (57%), Gaps = 6/177 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL ++ K+ R L KIE S +D E +T EE F ++GL+ K ++P+
Sbjct: 76 KILYKLRKARRKEERLAEALTKIEPKE-SSETTHDPEILTPEEHFFFLKMGLKCKNYVPI 134
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K + V++ A L +GGI++ I +
Sbjct: 135 GRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIVLDIH---EEN 191
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMK 766
+I YRGKNY +P + + PR L++ KAL +S A+ ++I LE +E ++
Sbjct: 192 TIIMYRGKNYSQPPTEIMSPRITLSRKKALDKSKYRDGLRAVRKYIPRLEGDLELLQ 248
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + + + G+ Q V+ +H W+K + +++ ++K + R TGG+V
Sbjct: 125 GLKCKNYVPIGRRGIYQGVILNMHLHWKKHQTLQVVVKTFSPEEVKEIAVELARLTGGIV 184
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ + +++YRG NY+ P
Sbjct: 185 LDIHEENTIIMYRGKNYSQP 204
>gi|79417439|ref|NP_189171.2| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
gi|75116513|sp|Q67XL4.1|Y3544_ARATH RecName: Full=Uncharacterized CRM domain-containing protein
At3g25440, chloroplastic; Flags: Precursor
gi|51971805|dbj|BAD44567.1| unknown protein [Arabidopsis thaliana]
gi|332643490|gb|AEE77011.1| uncharacterized CRM domain-containing protein [Arabidopsis
thaliana]
Length = 444
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
+I +KL ++ K+ R + K+E S + +D E +T EE + ++GL+ K ++P+
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSE-SAETTHDPEILTPEEHFYYLKMGLKCKNYVPV 198
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K T V++ A L +GGI++ + +G
Sbjct: 199 GRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVH---EGN 255
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQMKKEI 769
+I YRGKNY +P + + PR L + KAL +S A+ ++I LE ++ ++ +
Sbjct: 256 TIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQA 315
Query: 770 GVSKD 774
+D
Sbjct: 316 ETKRD 320
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 238 GMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLV 297
G+ + + V + G+ Q V+ +H W+K + +++ ++K + R TGG+V
Sbjct: 189 GLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIV 248
Query: 298 I-WRAGSVMVVYRGNNYAGP 316
+ G+ +++YRG NY P
Sbjct: 249 LDVHEGNTIIMYRGKNYVQP 268
>gi|357521229|ref|XP_003630903.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355524925|gb|AET05379.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 318
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFL 649
RI +KL + K + L+ K+ VP P +D E +T+EER +R G + K ++
Sbjct: 150 RIRYKL---EKAKRKETWLIEKLRKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYV 206
Query: 650 PLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPK 709
P+G RGVF VV NMHLHWK E VK+I K + L S GI+I I+ P
Sbjct: 207 PVGRRGVFGEVVLNMHLHWKKHETVKVICKPCKPGQAHEYTEELTRPSKGIVIDIK--PN 264
Query: 710 GFALIFYRGKNYRRPISLRPRNLLTKAKA 738
+IFYRG+NY +P + P + L+KAK
Sbjct: 265 NI-IIFYRGRNYVQPKVMSPPDTLSKAKV 292
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 214 RRMKAPTLAELTIE-----DEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDE 268
R+ P L T + +EE L+R G + + V + G+ +V+ +H W+K E
Sbjct: 170 RKFDVPKLPTETFDPEILTEEERHYLKRTGEKKKHYVPVGRRGVFGEVVLNMHLHWKKHE 229
Query: 269 LVRLKFHEVLATDMK--TAHEIVE---RRTGGLVI-WRAGSVMVVYRGNNYAGPSSKPQP 322
V+ V+ K AHE E R + G+VI + ++++ YRG NY P P
Sbjct: 230 TVK-----VICKPCKPGQAHEYTEELTRPSKGIVIDIKPNNIIIFYRGRNYVQPKVMSPP 284
Query: 323 LDGDGDTLFVPHVSS 337
DTL VSS
Sbjct: 285 -----DTLSKAKVSS 294
>gi|357439925|ref|XP_003590240.1| CRM domain-containing protein, putative [Medicago truncatula]
gi|355479288|gb|AES60491.1| CRM domain-containing protein, putative [Medicago truncatula]
Length = 472
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 86/150 (57%), Gaps = 6/150 (4%)
Query: 592 RIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
RI +KL ++ K+ R L KIE + S +D E +T EE F ++GL+ K ++P+
Sbjct: 121 RILYKLLKARKKEERLREALKKIEPTE-SSETIHDPEILTPEEHFFFLKMGLKSKNYVPV 179
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G RG++ GV+ NMHLHWK + ++++ K + V++ A L +GGI++ I
Sbjct: 180 GRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEED--- 236
Query: 712 ALIFYRGKNYRRPIS--LRPRNLLTKAKAL 739
+I YRGKNY +P + + PR L + K L
Sbjct: 237 TIIMYRGKNYSQPPTEIMSPRVTLPRKKVL 266
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 194 REEEENLRAGGEKPAGETRRRRMKAPTLAELTIED------EELRRLRRNGMYLRERINV 247
R++EE LR +K PT + TI D EE + G+ + + V
Sbjct: 130 RKKEERLREALKKIE----------PTESSETIHDPEILTPEEHFFFLKMGLKSKNYVPV 179
Query: 248 PKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVI-WRAGSVMV 306
+ G+ Q V+ +H W+K + +++ A ++K + R TGG+V+ ++
Sbjct: 180 GRRGIYQGVILNMHLHWKKHQTLQVVVKTFSAEEVKEIATELARLTGGIVLGIHEEDTII 239
Query: 307 VYRGNNYAGP 316
+YRG NY+ P
Sbjct: 240 MYRGKNYSQP 249
>gi|413917671|gb|AFW57603.1| hypothetical protein ZEAMMB73_144408 [Zea mays]
Length = 520
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 123/231 (53%), Gaps = 21/231 (9%)
Query: 550 APAGTLAEFYEAQKRWGREVSAEER-------EKMVEEASKA-KHARLVKRIEHKLAVSQ 601
APAG LA A+ W R +S + R ++M E + + R ++ KL
Sbjct: 38 APAGLLAVRPRAEGGWRRAMSTKGRTMRTKVEKRMARETGRTQRELRRAVKLRKKLMTED 97
Query: 602 AKKL----RAER----LLAKIEASMVP--SGPDYDQETITDEERAMFRRVGLRMKAFLPL 651
K + RA++ LL K++ +P P +D E +T E+ ++++G R + ++P+
Sbjct: 98 EKFIYNLRRAKKKVALLLQKLKKYELPDLQAPRHDPELLTAEQLQAYKKIGFRNRNYVPV 157
Query: 652 GIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGF 711
G+RGVF GVV+NMH+HWK+ E V++ +++ A +L SGGI+I I
Sbjct: 158 GVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK--- 214
Query: 712 ALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTI 762
+I +RG+NYR+P +L P N LTK KAL ++ Q E+ +I +E +
Sbjct: 215 TIIMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIETQL 265
>gi|297604874|ref|NP_001056251.2| Os05g0551900 [Oryza sativa Japonica Group]
gi|255676553|dbj|BAF18165.2| Os05g0551900, partial [Oryza sativa Japonica Group]
Length = 73
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/47 (85%), Positives = 43/47 (91%)
Query: 441 GRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSLT 487
GRNRNHQGLA AI+KLWEKSLV KIAVKRGIQNTNNKLM+EE+K T
Sbjct: 1 GRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKVWT 47
>gi|359488800|ref|XP_002272412.2| PREDICTED: uncharacterized protein LOC100254349 [Vitis vinifera]
Length = 666
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 120/211 (56%), Gaps = 14/211 (6%)
Query: 566 GREVSAEEREKMVEEASKA-KHARLVKRIEHKLAVSQAKKL----RAER----LLAKIEA 616
GR + ++ +M +E+ K + R +++ KL + + + RA++ LL K++
Sbjct: 59 GRSMRSKVERRMRKESGKTLREVRRAQKLRKKLMTDEERLIYNLRRAKKKVALLLQKLKK 118
Query: 617 SMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELV 674
+P P +D E +T E+ ++++G R K ++P+G+RGVF GVV+NMHLHWK+ E V
Sbjct: 119 YELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETV 178
Query: 675 KLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLT 734
++ +++ A +L SGGI+I + V +I +RG+NYR+P +L P N LT
Sbjct: 179 QVCCDNFPKEKIKEMATMLARLSGGIVINVHDVK---TIIMFRGRNYRQPKNLIPINTLT 235
Query: 735 KAKALKRSVAMQRHEALSQHISDLENTIEQM 765
K KAL ++ Q ++ +I +E + +M
Sbjct: 236 KRKALFKARFEQALDSQKLNIKKIEQQLRRM 266
>gi|125547308|gb|EAY93130.1| hypothetical protein OsI_14936 [Oryza sativa Indica Group]
Length = 103
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 56/90 (62%)
Query: 352 VPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLLPPKVDGYKTPFRLL 411
+P L P + E E + L D LGPR+ +W P+DADLLP V GYK PFR+L
Sbjct: 7 IPRTTLVEPVPEIKYEDEIDKLSDELGPRYDDWPRPDPSPIDADLLPATVPGYKPPFRVL 66
Query: 412 PTGMRSRLTNAEMTDLRRLARSLPCHFALG 441
P G+R L+ + T+LRRLAR LP HFALG
Sbjct: 67 PYGVRPSLSRRDTTNLRRLARGLPPHFALG 96
>gi|356573355|ref|XP_003554827.1| PREDICTED: uncharacterized protein LOC100782246 [Glycine max]
Length = 653
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E +T E+ ++++G R K ++P+G+RGVF GVV+NMHLH
Sbjct: 129 LLQKLKKYELPELPHPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH 188
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A +L SGGI+I + V +I +RG+NYR+P +L
Sbjct: 189 WKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK---TIIMFRGRNYRQPKNL 245
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I +E + +M
Sbjct: 246 IPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 283
>gi|356513969|ref|XP_003525680.1| PREDICTED: uncharacterized protein LOC100780131 [Glycine max]
Length = 653
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E +T E+ ++++G R K ++P+G+RGVF GVV+NMHLH
Sbjct: 129 LLQKLKKYELPELPPPRHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLH 188
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A +L SGGI+I + V +I +RG+NYR+P +L
Sbjct: 189 WKFHETVQVCCDNFPKEKIKEMASMLARLSGGIVINVHNVK---TIIMFRGRNYRQPKNL 245
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I +E + +M
Sbjct: 246 IPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 283
>gi|413950005|gb|AFW82654.1| hypothetical protein ZEAMMB73_283519 [Zea mays]
Length = 645
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 14/222 (6%)
Query: 552 AGTLAEFYEAQKRWGREVSAEEREKMVEEASKA-KHARLVKRIEHKLAVSQAKKL----R 606
AG + + A GR + ++ ++M E + + R ++ KL K + R
Sbjct: 44 AGAYSRWRRAMSTKGRSMRSKVEKRMARETGRTQRELRRAVKLRKKLMTEDEKLIYNLRR 103
Query: 607 AER----LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
A++ LL K++ +P P +D E +T E+ ++++G R + ++P+G+RGVF GV
Sbjct: 104 AKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGV 163
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
V+NMH+HWK+ E V++ +++ A +L SGGI+I I +I +RG+N
Sbjct: 164 VQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFRGRN 220
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTI 762
YR+P +L P N LTK KAL ++ Q E+ +I +E +
Sbjct: 221 YRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIETQL 262
>gi|255560940|ref|XP_002521483.1| conserved hypothetical protein [Ricinus communis]
gi|223539382|gb|EEF40973.1| conserved hypothetical protein [Ricinus communis]
Length = 745
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E T E+ ++++G R + ++P+G+RGVF GVV+NMHLH
Sbjct: 130 LLQKLKKYELPELPPPLHDPELFTSEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLH 189
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A +L SGGI+I I V +I +RG+NYR+P +L
Sbjct: 190 WKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVK---TIIMFRGRNYRQPKNL 246
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I +E + +M
Sbjct: 247 IPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 284
>gi|297818350|ref|XP_002877058.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
gi|297322896|gb|EFH53317.1| hypothetical protein ARALYDRAFT_484545 [Arabidopsis lyrata subsp.
lyrata]
Length = 488
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E T E+ F+++G + K ++P+G+RGVF GVV+NMH+H
Sbjct: 70 LLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMH 129
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A ++ SGG++I I V +I +RG+NYR+P +L
Sbjct: 130 WKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNL 186
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I E + +M
Sbjct: 187 IPVNTLTKRKALFKARFEQALESQKLNIKKTEQQLRRM 224
>gi|15232195|ref|NP_189392.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
gi|11994182|dbj|BAB01285.1| unnamed protein product [Arabidopsis thaliana]
gi|332643815|gb|AEE77336.1| RNA-binding CRS1 / YhbY (CRM) domain protein [Arabidopsis thaliana]
Length = 491
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 93/158 (58%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E T E+ F+++G + K ++P+G+RGVF GVV+NMH+H
Sbjct: 70 LLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMH 129
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A ++ SGG++I I V +I +RG+NYR+P +L
Sbjct: 130 WKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVK---TIIMFRGRNYRQPKNL 186
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I E + +M
Sbjct: 187 IPVNTLTKRKALFKARFEQALESQKLNIKKTEQQLRRM 224
>gi|51038196|gb|AAT93999.1| unknow protein [Oryza sativa Japonica Group]
gi|222630175|gb|EEE62307.1| hypothetical protein OsJ_17096 [Oryza sativa Japonica Group]
Length = 560
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMV 619
+ +KR RE +RE + A K + + ++ +AKK + LL K++ +
Sbjct: 75 KVEKRMARETGRTQRE--LRRAVKLRKKLMTDDERLIYSLRRAKK-KVALLLQKLKKYEL 131
Query: 620 PS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLI 677
P P +D E +T E+ ++++G R + ++P+G+RGVF GVV+NMH+HWK+ E V++
Sbjct: 132 PDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVC 191
Query: 678 TKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAK 737
+++ A +L SGGI+I I +I +RG+NYR+P +L P N LTK K
Sbjct: 192 CDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPLNTLTKRK 248
Query: 738 ALKRSVAMQRHEALSQHISDLENTI 762
AL ++ Q E+ +I +E +
Sbjct: 249 ALFKARFEQALESQKLNIKKIETQL 273
>gi|125550822|gb|EAY96531.1| hypothetical protein OsI_18436 [Oryza sativa Indica Group]
Length = 560
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 113/205 (55%), Gaps = 8/205 (3%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMV 619
+ +KR RE +RE + A K + + ++ +AKK + LL K++ +
Sbjct: 75 KVEKRMARETGRTQRE--LRRAVKLRKKLMTDDERLIYSLRRAKK-KVALLLQKLKKYEL 131
Query: 620 PS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLI 677
P P +D E +T E+ ++++G R + ++P+G+RGVF GVV+NMH+HWK+ E V++
Sbjct: 132 PDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVC 191
Query: 678 TKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAK 737
+++ A +L SGGI+I I +I +RG+NYR+P +L P N LTK K
Sbjct: 192 CDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFRGRNYRQPKNLIPLNTLTKRK 248
Query: 738 ALKRSVAMQRHEALSQHISDLENTI 762
AL ++ Q E+ +I +E +
Sbjct: 249 ALFKARFEQALESQKLNIKKIETQL 273
>gi|242086871|ref|XP_002439268.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
gi|241944553|gb|EES17698.1| hypothetical protein SORBIDRAFT_09g003490 [Sorghum bicolor]
Length = 652
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 14/222 (6%)
Query: 552 AGTLAEFYEAQKRWGREVSAEEREKMVEEASKA-KHARLVKRIEHKLAVSQAKKL----R 606
AG + A GR + ++ ++M E + + R ++ KL K + R
Sbjct: 45 AGADGAWRRAMSTKGRSMRSKVEKRMARETGRTQRELRRAVKLRKKLMTEDEKLIYNLRR 104
Query: 607 AER----LLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGV 660
A++ LL K++ +P P +D E +T E+ ++++G R + ++P+G+RGVF GV
Sbjct: 105 AKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGV 164
Query: 661 VENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKN 720
V+NMH+HWK+ E V++ +++ A +L SGGI+I I +I +RG+N
Sbjct: 165 VQNMHMHWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTK---TIIMFRGRN 221
Query: 721 YRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISDLENTI 762
YR+P +L P N LTK KAL ++ Q E+ +I +E +
Sbjct: 222 YRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIETQL 263
>gi|356560779|ref|XP_003548665.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized CRM
domain-containing protein At3g25440, chloroplastic-like
[Glycine max]
Length = 273
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
+V+RI L +Q KK R L KIE + S +D E + EE F ++GL+ K
Sbjct: 18 VVQRIP-SLTKAQKKKKRLCEALKKIEPAK-SSETTHDPEILXPEEHFFFLKMGLKRKNN 75
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
+P+G RG++ GV+ +MHLH K + +K++ K + A V++ A L SGGI++ I
Sbjct: 76 VPVGRRGIYQGVILSMHLHXKKHQTLKVV-KTFSAAEVKEIAAELARLSGGIVLDIH--- 131
Query: 709 KGFALIFYRGKNYRRPIS--LRPRNLLTKAKALKRS 742
+ +I YRGKNY +P + + PR L++ KAL +S
Sbjct: 132 EDNTIIMYRGKNYSQPPTQIMSPRVSLSRKKALDKS 167
>gi|296087592|emb|CBI34848.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 14/184 (7%)
Query: 566 GREVSAEEREKMVEEASKA-KHARLVKRIEHKLAVSQAKKL----RAER----LLAKIEA 616
GR + ++ +M +E+ K + R +++ KL + + + RA++ LL K++
Sbjct: 74 GRSMRSKVERRMRKESGKTLREVRRAQKLRKKLMTDEERLIYNLRRAKKKVALLLQKLKK 133
Query: 617 SMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELV 674
+P P +D E +T E+ ++++G R K ++P+G+RGVF GVV+NMHLHWK+ E V
Sbjct: 134 YELPELPAPRHDPELLTAEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETV 193
Query: 675 KLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLT 734
++ +++ A +L SGGI+I + V +I +RG+NYR+P +L P N LT
Sbjct: 194 QVCCDNFPKEKIKEMATMLARLSGGIVINVHDVK---TIIMFRGRNYRQPKNLIPINTLT 250
Query: 735 KAKA 738
K KA
Sbjct: 251 KRKA 254
>gi|168020023|ref|XP_001762543.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686276|gb|EDQ72666.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 548
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 25/215 (11%)
Query: 629 TITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVED 688
+T E+ +++G + K ++P+G RG++ G ++NMH+HWK E V++ +++
Sbjct: 224 VLTPEQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKE 283
Query: 689 TARLLEYESGGILIAIERVPKGFALIFYRGKNYRRP---ISLRPRNLLTKAKALKRSVAM 745
LE SGGI+I I +G +I +RG+NY+RP I + +N K KAL +S
Sbjct: 284 MGETLERLSGGIVIDIH---QGTTIIMWRGRNYKRPKVDIPIIFKN-FNKRKALIKSKHE 339
Query: 746 QRHEALSQHISDLENTIEQMKKEI---------------GVSKDEEDGNIRCSGDLKQFD 790
Q +L I E + +++ ++ G++ E + D
Sbjct: 340 QSIGSLKDQIVKWEKDLRELRADMAREEAARARWLEENPGMAPPEPPAPVSVEQSDDDSD 399
Query: 791 HVSVLPQNEDDDYVSDEDFDSEADEDSELSSFESD 825
V+ + DDD +D E D+DS+ +SD
Sbjct: 400 EVTDI---SDDDITEVDDLGPEYDDDSDWEYPDSD 431
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
E+L L++ G + + V + G+ ++ +H W+K E VR+ +K E
Sbjct: 228 EQLYALKKLGYKNKNYVPVGRRGIYGGTIQNMHMHWKKHETVRIDCDNFPKEKIKEMGET 287
Query: 289 VERRTGGLVI-WRAGSVMVVYRGNNYAGP 316
+ER +GG+VI G+ ++++RG NY P
Sbjct: 288 LERLSGGIVIDIHQGTTIIMWRGRNYKRP 316
>gi|357134703|ref|XP_003568955.1| PREDICTED: uncharacterized protein LOC100832553 [Brachypodium
distachyon]
Length = 562
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 114/205 (55%), Gaps = 8/205 (3%)
Query: 560 EAQKRWGREVSAEEREKMVEEASKAKHARLV--KRIEHKLAVSQAKKLRAERLLAKIEAS 617
+ +KR RE +RE + A K + + +R+ H + ++ K + L K E
Sbjct: 79 KVEKRMARETGRTQRE--LRRAVKLRKKLMTDDERLIHSMRRAKKKVALLLQKLKKYELP 136
Query: 618 MVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLI 677
+P+ P +D E +T E+ ++++G R + ++P+G+RGVF GVV+NMH+HWK+ E V++
Sbjct: 137 DLPA-PRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHMHWKFHETVQVC 195
Query: 678 TKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAK 737
+++ A +L SGGI++ I +I +RG+NYR+P +L P N LTK K
Sbjct: 196 CDNFPKEKIKEMAAMLTRLSGGIVVNIHNTK---TIIMFRGRNYRQPKNLIPFNTLTKRK 252
Query: 738 ALKRSVAMQRHEALSQHISDLENTI 762
AL ++ Q E+ +I +E +
Sbjct: 253 ALFKARYEQALESQKLNIKKIETQL 277
>gi|224055583|ref|XP_002298551.1| predicted protein [Populus trichocarpa]
gi|222845809|gb|EEE83356.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 94/158 (59%), Gaps = 5/158 (3%)
Query: 610 LLAKIEASMVPSGPD--YDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLH 667
LL K++ +P P +D E +T E+ ++++G R K ++P+G+RGVF GVV+NMH+H
Sbjct: 59 LLQKLKKYDLPELPSPLHDPELLTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHMH 118
Query: 668 WKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISL 727
WK+ E V++ +++ A ++ SGGI++ + V +I +RG+NYR+P L
Sbjct: 119 WKFHETVQVSCDNFPKEKIKEMATMIARLSGGIVVNVHNVK---TIIMFRGRNYRQPKDL 175
Query: 728 RPRNLLTKAKALKRSVAMQRHEALSQHISDLENTIEQM 765
P N LTK KAL ++ Q E+ +I +E + +M
Sbjct: 176 IPLNTLTKRKALFKARFEQALESQKLNIKQIEQQLRRM 213
>gi|449450187|ref|XP_004142845.1| PREDICTED: uncharacterized protein LOC101215761 [Cucumis sativus]
Length = 619
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 611 LAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKY 670
L K E +P P +D E +T E+ ++++G R + ++P+G+RGVF GVV+NMHLHWK+
Sbjct: 131 LKKYELPELPP-PRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKF 189
Query: 671 RELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPR 730
E V++ +++ A +L SGGI++ I V +I +RG+NYR+P +L P
Sbjct: 190 HETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK---TIIMFRGRNYRQPKNLIPI 246
Query: 731 NLLTKAKAL 739
N LTK KAL
Sbjct: 247 NTLTKRKAL 255
>gi|449483922|ref|XP_004156733.1| PREDICTED: uncharacterized protein LOC101226279 [Cucumis sativus]
Length = 619
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
Query: 611 LAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKY 670
L K E +P P +D E +T E+ ++++G R + ++P+G+RGVF GVV+NMHLHWK+
Sbjct: 131 LKKYELPELPP-PRHDPELLTPEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHLHWKF 189
Query: 671 RELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPR 730
E V++ +++ A +L SGGI++ I V +I +RG+NYR+P +L P
Sbjct: 190 HETVQVCCDNFPKEKIKEMATMLARLSGGIVVNIHDVK---TIIMFRGRNYRQPKNLIPI 246
Query: 731 NLLTKAKAL 739
N LTK KAL
Sbjct: 247 NTLTKRKAL 255
>gi|225453847|ref|XP_002272563.1| PREDICTED: CRS2-associated factor 1, mitochondrial [Vitis vinifera]
gi|296089125|emb|CBI38828.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 203 GGEKPAGETRRRRMKAPTLAE-LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIH 261
G E P E +RRRM+ TL E LT + ++ + + +IN+ + GLT +++ IH
Sbjct: 142 GKEDPKLEEKRRRMREKTLGEPLTAAERKILVEKCQRHRTKRQINLGRDGLTHNMLNDIH 201
Query: 262 DKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
+ W+ E VR+K V DMK +E +T G VI R G ++V+YRG NY P +P
Sbjct: 202 NHWKHAEAVRIKCMGVPTVDMKNVCTQLEDKTSGKVIHRQGGLLVLYRGRNYH-PKKRP 259
>gi|413918581|gb|AFW58513.1| hypothetical protein ZEAMMB73_947708, partial [Zea mays]
Length = 208
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 52/72 (72%)
Query: 219 PTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVL 278
P+ AEL + +ELRRL+ G+ +R+R+ V KAG+T+ ++ IH++WR E+V+L+ +V
Sbjct: 136 PSAAELALPRDELRRLQGIGIRVRKRLKVGKAGITEGIVNGIHERWRNAEVVKLRCEDVW 195
Query: 279 ATDMKTAHEIVE 290
A +M+ HEI+E
Sbjct: 196 AMNMRRTHEILE 207
>gi|297836246|ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
gi|297331845|gb|EFH62264.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
lyrata]
Length = 700
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE+R L + + ++N+ + GLT +++ IHD W++ + ++K V DM E
Sbjct: 246 EEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDKVCEQ 305
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNY 313
+E + GG VI+R G V+ ++RG NY
Sbjct: 306 LEEKIGGKVIYRRGGVLFLFRGRNY 330
>gi|18399222|ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis thaliana]
gi|20197570|gb|AAD24394.2| expressed protein [Arabidopsis thaliana]
gi|28393847|gb|AAO42331.1| unknown protein [Arabidopsis thaliana]
gi|330251862|gb|AEC06956.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 701
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE+R L + + ++N+ + GLT +++ IHD W++ + ++K V DM E
Sbjct: 246 EEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQ 305
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNY 313
+E + GG VI+R G V+ ++RG NY
Sbjct: 306 LEEKIGGKVIYRRGGVLFLFRGRNY 330
>gi|357132021|ref|XP_003567631.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like
[Brachypodium distachyon]
Length = 607
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 172 VRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEEL 231
V P+ ++ EV G L G G+ RRR L E + E+
Sbjct: 197 VSPHGIMMEVRGRRQLDL--------------GRVSPGDGRRREE---VLGE-PLTPAEV 238
Query: 232 RRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVER 291
R L + M ++N+ + GLT +++ IH WR+ E+ +++ V DMK +E
Sbjct: 239 RALVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLEE 298
Query: 292 RTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
++GG VI R G V+ +YRG NY P ++P+
Sbjct: 299 KSGGKVIHRVGGVVFLYRGRNY-NPRTRPR 327
>gi|356527769|ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 723
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 28/291 (9%)
Query: 41 SFQLLKPFSSLRTNQNPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRN 100
+F + P SL N NP S +F + +P T +P N P+P +K R
Sbjct: 8 TFPIFAP--SLDPNPNPPRQSSELRFSRWNNPETRSP--NARRTPRPTGPAKRSKSPARP 63
Query: 101 QIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEE---EGEEEEDDINGAA 157
++D + S+P + S N ++ +R+ N+ + D +G E +
Sbjct: 64 KVDRQ-----SHPAFRFS-NIPKSKPQRVSGAPENVKISDDGLSYVIDGAPFEFKYSYTE 117
Query: 158 TGEERLEDLLRREWVR--PNTVLREVEG-----------EEDDSLL--PWEREEEENLRA 202
T + + + +V P+T+ R G +E DS + P ++ + +++
Sbjct: 118 TPKVKPIKMREAPFVPFGPDTMPRPWTGRAPLPASKKKLKEFDSFVLPPPHKKGVKPVQS 177
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHD 262
G AG R + + EE+R L ++ M + ++N+ + GLT +++ IH
Sbjct: 178 PGPYLAGTGPRYVKSREEILGEPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHA 237
Query: 263 KWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
W++ +++ V DM +E RTGG +I R G V+ ++RG NY
Sbjct: 238 HWKRRRACKIRCKGVCTVDMDNVCHQLEERTGGKIIHRKGGVLYLFRGRNY 288
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E +T EE + ++ + L +G G+ +++N+H HWK R K+ K ++
Sbjct: 199 EPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRACKIRCKGVCTVDMD 258
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
+ LE +GG +I KG L +RG+NY
Sbjct: 259 NVCHQLEERTGGKIIHR----KGGVLYLFRGRNY 288
>gi|115475027|ref|NP_001061110.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|75133775|sp|Q6Z4U2.1|CAF1M_ORYSJ RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|40253285|dbj|BAD05220.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|40253602|dbj|BAD05547.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113623079|dbj|BAF23024.1| Os08g0174900 [Oryza sativa Japonica Group]
gi|125560323|gb|EAZ05771.1| hypothetical protein OsI_28005 [Oryza sativa Indica Group]
Length = 428
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+++IN+ + GLT +++ IH+ W+ DE VR+K V DM+ +E +TGGL+I R
Sbjct: 175 KKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRH 234
Query: 302 GSVMVVYRGNNYAGPSSKP 320
G +++YRG +Y P +P
Sbjct: 235 GGQLILYRGRHY-NPKKRP 252
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 628 ETITDEERAMF--RRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAY 685
E +T ERA + R K + LG G+ ++ ++H HWK E V++
Sbjct: 155 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 214
Query: 686 VEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY---RRPI 725
+++ LE ++GG++I G LI YRG++Y +RP+
Sbjct: 215 MQNVCHQLEDKTGGLIIHRH----GGQLILYRGRHYNPKKRPV 253
>gi|255589857|ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
gi|223524018|gb|EEF27274.1| conserved hypothetical protein [Ricinus communis]
Length = 748
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE++ L + R ++N+ + GLT +++ IH W++ + ++K V DM +
Sbjct: 255 EEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQ 314
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNY 313
+E RTGG VI+R G V+ ++RG NY
Sbjct: 315 LEERTGGKVIYRKGGVVYLFRGRNY 339
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E +T EE + L+ + L +G G+ +++N+H HWK R + K+ ++
Sbjct: 250 EPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMD 309
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
+ + LE +GG +I KG + +RG+NY
Sbjct: 310 NVCQQLEERTGGKVI----YRKGGVVYLFRGRNY 339
>gi|125602364|gb|EAZ41689.1| hypothetical protein OsJ_26223 [Oryza sativa Japonica Group]
Length = 615
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+++IN+ + GLT +++ IH+ W+ DE VR+K V DM+ +E +TGGL+I R
Sbjct: 151 KKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRH 210
Query: 302 GSVMVVYRGNNYAGPSSKP 320
G +++YRG +Y P +P
Sbjct: 211 GGQLILYRGRHY-NPKKRP 228
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 251 GLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRG 310
GLT +++ IH+ W+ DE VR+K V DM+ +E +TGGL+I R G +++YRG
Sbjct: 371 GLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDKTGGLIIHRHGGQLILYRG 430
Query: 311 NNYAGPSSKP 320
+Y P +P
Sbjct: 431 RHY-NPKKRP 439
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 135/321 (42%), Gaps = 24/321 (7%)
Query: 206 KPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWR 265
KPA R +K T+ LT+E E + +R+ G+Y+ + K G ++ + D +
Sbjct: 236 KPAEPVYPRLIKT-TIEGLTVE--ETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFL 292
Query: 266 KDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP----SSKPQ 321
DELVR+ + +D + + +++ ++V+RG +Y G + K
Sbjct: 293 TDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDYNGTIQDNTQKTS 352
Query: 322 PLDGDGDTLFVPHVSSTDGSTARSVDE-----KSEVPVRILDHSKPMTEEEAECNSLLDS 376
+ ++ + DG T +++ K++ VR+ P + + C+ L D
Sbjct: 353 VSVLEEESAGAESENGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVDMQNVCHQLEDK 412
Query: 377 LGPRFQEWWGTGIL--------PVDADLLPPKVDGYKTPF--RLLPTGMRSRLTNAEMTD 426
G G ++ P ++P + P RL+ T + LT E +
Sbjct: 413 TGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEG-LTVEETKE 471
Query: 427 LRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKLMAEELKSL 486
+R+ +P L +N + L + + + +I K G+ ++ + + +L+ L
Sbjct: 472 MRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDSK-GLPKSDYRKIGVKLRDL 530
Query: 487 TGGTLLQRNKFYIVLYRGKDF 507
++ +K I+++RGKD+
Sbjct: 531 VPCIIVSFDKEQIIVWRGKDY 551
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
Query: 628 ETITDEERAMF--RRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAY 685
E +T ERA + R K + LG G+ ++ ++H HWK E V++
Sbjct: 131 EPLTPAERAFLVSKCQKSRTKKQINLGRDGLTHNMLNDIHNHWKNDEAVRVKCLGVPTVD 190
Query: 686 VEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY---RRPI 725
+++ LE ++GG++I G LI YRG++Y +RP+
Sbjct: 191 MQNVCHQLEDKTGGLIIHRH----GGQLILYRGRHYNPKKRPV 229
>gi|224113759|ref|XP_002332503.1| predicted protein [Populus trichocarpa]
gi|222832483|gb|EEE70960.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE++ L + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 248 LTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 307
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E RTGG +I+R G V+ ++RG NY
Sbjct: 308 CQQLEERTGGKIIYRKGGVLYLFRGRNY 335
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 621 SGPDYDQ-------ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
+GP Y + + +T EE L+ K L +G G+ +++N+H HWK R +
Sbjct: 232 AGPRYAKTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRV 291
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPR 730
K+ K +++ + LE +GG +I KG L +RG+NY RPR
Sbjct: 292 CKIKCKGVCTVDMDNVCQQLEERTGGKII----YRKGGVLYLFRGRNYN--YRFRPR 342
>gi|449443167|ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
gi|449521361|ref|XP_004167698.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
sativus]
Length = 745
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 189 LLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVP 248
L P ++ + ++A G AG + M + + EE++ L R + ++N+
Sbjct: 215 LPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKALIRGCINSNRQLNIG 274
Query: 249 KAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVY 308
+ GLT +++ IH W++ + ++K V DM + +E RTGG +I+ G + +Y
Sbjct: 275 RDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKIIYSRGGALYLY 334
Query: 309 RGNNY 313
RG NY
Sbjct: 335 RGRNY 339
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 621 SGPDYDQ-------ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
SGP Y E +T EE R + L +G G+ ++EN+H WK R +
Sbjct: 236 SGPKYVMSREEILGEPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRV 295
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLL 733
K+ K +++ + LE +GG +I +G AL YRG+NY RPR L
Sbjct: 296 CKIKCKGVCTVDMDNVKQQLEERTGGKII----YSRGGALYLYRGRNYN--YKTRPRFPL 349
Query: 734 TKAKALKRSVAMQRHEALSQHISD---LENTIEQMKK 767
K A + L +HI D LE E KK
Sbjct: 350 MLWKP-----AAPVYPRLVKHIPDGLTLEEVTEMRKK 381
>gi|357132246|ref|XP_003567742.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like
[Brachypodium distachyon]
Length = 702
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 183 LSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMDNV 242
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E R GG VI R G V+ ++RG NY
Sbjct: 243 CQQLEERVGGKVIHRQGGVVFLFRGRNY 270
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E ++ EE A + L+ K L +G G+ ++EN+H HWK + + K+ K ++
Sbjct: 181 EPLSKEEVAELVKGNLKAKRQLNIGRDGLTHNMLENIHAHWKRKRVCKIKCKGVCTVDMD 240
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNYR---RPI 725
+ + LE GG +I + G + +RG+NY RP+
Sbjct: 241 NVCQQLEERVGGKVIHRQ----GGVVFLFRGRNYNYRTRPV 277
>gi|242078343|ref|XP_002443940.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
gi|241940290|gb|EES13435.1| hypothetical protein SORBIDRAFT_07g004760 [Sorghum bicolor]
Length = 437
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+ +IN+ + GLT +++ IH+ W+ E VR+K V DM+ +E +TGG++I R
Sbjct: 182 KRQINLGRDGLTHNMLNDIHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGVIIHRH 241
Query: 302 GSVMVVYRGNNYAGPSSKP 320
GS++++YRG +Y P +P
Sbjct: 242 GSLLILYRGRHY-NPKKRP 259
>gi|222618317|gb|EEE54449.1| hypothetical protein OsJ_01538 [Oryza sativa Japonica Group]
Length = 587
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 214 EVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 273
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ +YRG NY P ++P+
Sbjct: 274 EEKSGGKVIHRVGGVVFLYRGRNY-NPRTRPR 304
>gi|242052829|ref|XP_002455560.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
gi|241927535|gb|EES00680.1| hypothetical protein SORBIDRAFT_03g013160 [Sorghum bicolor]
Length = 614
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 240 EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 299
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ VYRG +Y P ++P
Sbjct: 300 EEKSGGKVIHRVGGVVFVYRGRHY-DPKTRPH 330
>gi|115436276|ref|NP_001042896.1| Os01g0323300 [Oryza sativa Japonica Group]
gi|75115027|sp|Q657G7.1|CAF2P_ORYSJ RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|52075771|dbj|BAD44991.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|52076260|dbj|BAD45045.1| putative CRS2-associated factor 2 [Oryza sativa Japonica Group]
gi|113532427|dbj|BAF04810.1| Os01g0323300 [Oryza sativa Japonica Group]
Length = 607
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 234 EVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 293
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ +YRG NY P ++P+
Sbjct: 294 EEKSGGKVIHRVGGVVFLYRGRNY-NPRTRPR 324
>gi|125525663|gb|EAY73777.1| hypothetical protein OsI_01650 [Oryza sativa Indica Group]
Length = 609
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 236 EVRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 295
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ +YRG NY P ++P+
Sbjct: 296 EEKSGGKVIHRVGGVVFLYRGRNY-NPRTRPR 326
>gi|225445140|ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
Length = 752
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 207 PAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRK 266
P R R + L E + +EE++ L + + + ++N+ + GLT +++ IH W++
Sbjct: 226 PGSGPRYVRSREEILGE-PLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKR 284
Query: 267 DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ ++K V DM + +E +TGG VI+ G V+ ++RG NY
Sbjct: 285 RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 621 SGPDYDQ-------ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
SGP Y + E +T+EE + ++ K L +G G+ +++N+H HWK R +
Sbjct: 228 SGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRV 287
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
K+ K +++ + LE ++GG +I KG L +RG+NY
Sbjct: 288 CKIKCKGVCTVDMDNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|297738777|emb|CBI28022.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 207 PAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRK 266
P R R + L E + +EE++ L + + + ++N+ + GLT +++ IH W++
Sbjct: 226 PGSGPRYVRSREEILGE-PLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKR 284
Query: 267 DELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ ++K V DM + +E +TGG VI+ G V+ ++RG NY
Sbjct: 285 RRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 621 SGPDYDQ-------ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
SGP Y + E +T+EE + ++ K L +G G+ +++N+H HWK R +
Sbjct: 228 SGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRV 287
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
K+ K +++ + LE ++GG +I KG L +RG+NY
Sbjct: 288 CKIKCKGVCTVDMDNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|168045030|ref|XP_001774982.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673729|gb|EDQ60248.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 206 KPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWR 265
+P G++R + + AP L +E+ ++ + + ++N+ + G T +++ +HD W+
Sbjct: 77 QPLGKSRAKILGAP-LTTAEVEELVMQCQKED-----RQLNLGRDGFTHNMLASVHDYWK 130
Query: 266 KDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ ++VR+K V DM ++E +TGG +I RAG V+ ++RG NY
Sbjct: 131 RRQVVRIKCKGVPTVDMDNVCTVLEDKTGGKIISRAGGVVYLFRGRNY 178
>gi|226508160|ref|NP_001140244.1| uncharacterized protein LOC100272285 [Zea mays]
gi|194698680|gb|ACF83424.1| unknown [Zea mays]
gi|413917198|gb|AFW57130.1| hypothetical protein ZEAMMB73_054545 [Zea mays]
Length = 424
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+ +IN+ + G T +++ +H+ W+ E VR+K V DM+ +E +TGGL+I R
Sbjct: 183 KRQINLGRDGFTHNMLSDVHNNWKTCEAVRIKCLGVPTVDMQNVCHQLEDKTGGLIIHRH 242
Query: 302 GSVMVVYRGNNYAGPSSKP 320
GS++++YRG +Y P +P
Sbjct: 243 GSLLILYRGRHY-NPKKRP 260
>gi|15240416|ref|NP_200300.1| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75170294|sp|Q9FFU1.1|CAF2M_ARATH RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|9758269|dbj|BAB08768.1| unnamed protein product [Arabidopsis thaliana]
gi|332009170|gb|AED96553.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 358
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 217 KAPTLAELTIEDE--ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKF 274
+A L E EDE EL R+ R+ IN+ K G+T +++ IH+ W+K E VR+K
Sbjct: 135 RARVLGETLTEDEVTELIERYRHSDCTRQ-INLGKGGVTHNMIDDIHNHWKKAEAVRIKC 193
Query: 275 HEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
V DM +E ++GG +++R +++V+YRG NY P S+P
Sbjct: 194 LGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNY-DPKSRP 238
>gi|194697426|gb|ACF82797.1| unknown [Zea mays]
Length = 611
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 238 EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 297
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ +YRG +Y P ++P+
Sbjct: 298 EEKSGGKVIHRVGGVVFLYRGRHY-DPKTRPR 328
>gi|326525845|dbj|BAJ93099.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 607
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ E R L + M ++N+ + GLT +++ IH WR+ E+ +++ V DM
Sbjct: 232 LTSAETRELVKPHMSHNRQLNIGRDGLTHNMLEMIHCHWRRQEVCKVRCRGVPTVDMNNL 291
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
+E ++GG VI R G V+ +YRG NY P ++P+
Sbjct: 292 CYHLEEKSGGKVIKRVGGVVFLYRGRNY-NPRTRPR 326
>gi|162464008|ref|NP_001105669.1| CRS2-associated factor 2, chloroplastic precursor [Zea mays]
gi|75147311|sp|Q84N48.1|CAF2P_MAIZE RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|30349369|gb|AAP22136.1| CRS2-associated factor 2 [Zea mays]
gi|414877310|tpg|DAA54441.1| TPA: crs2 associated factor2 [Zea mays]
Length = 611
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+R L + + ++N+ + GLT +++ IH WR+ E+ +++ V DMK +
Sbjct: 238 EVRALVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHL 297
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E ++GG VI R G V+ +YRG +Y P ++P+
Sbjct: 298 EEKSGGKVIHRVGGVVFLYRGRHY-DPKTRPR 328
>gi|449432211|ref|XP_004133893.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Cucumis
sativus]
gi|449480099|ref|XP_004155799.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
mitochondrial-like [Cucumis sativus]
Length = 392
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMY-------LRERINVPKAGLTQD 255
G E P E +RR M+ I+ E L R + + +IN+ + GLT +
Sbjct: 131 GMEDPRLEGKRRVMRE------AIQGEPLPGAERKALVEKCQKNKTKRQINLGRDGLTHN 184
Query: 256 VMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAG 315
++ IH+ WR E VR+K V DMK +E +T G +I R G +V+YRG NY
Sbjct: 185 MLNDIHNHWRHGEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHGGFLVLYRGRNY-N 243
Query: 316 PSSKP 320
P +P
Sbjct: 244 PKKRP 248
>gi|242082009|ref|XP_002445773.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
gi|241942123|gb|EES15268.1| hypothetical protein SORBIDRAFT_07g025550 [Sorghum bicolor]
Length = 674
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 185 LTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNI 244
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E + GG VI R G V+ ++RG NY
Sbjct: 245 CQQLEEKVGGKVIHRQGGVIFLFRGRNY 272
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
D E +T EE + L+ K L +G G+ ++EN+H HWK + + K+ K
Sbjct: 179 DILGEPLTKEEVFELVKGSLKTKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCT 238
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
+++ + LE + GG +I + G + +RG+NY
Sbjct: 239 VDMDNICQQLEEKVGGKVIHRQ----GGVIFLFRGRNY 272
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Query: 411 LPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRG 470
L T + LT E T++R R LP LG+N + L + + +E + ++ G
Sbjct: 295 LVTKVPGGLTPDEATEMRARGRQLPPICKLGKNGVYANLVKQVREAFEACDLVRVDCS-G 353
Query: 471 IQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALAEREQCAKQIQDVE 530
+ ++ + + +LK L LL +I+++RG D+ S+L E+ + ++ V+
Sbjct: 354 LNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDW-----KSSLPPLEENSFEVAKVQ 408
Query: 531 EKVRSK 536
E + K
Sbjct: 409 ESLSGK 414
>gi|147799432|emb|CAN76866.1| hypothetical protein VITISV_012308 [Vitis vinifera]
Length = 393
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 52/88 (59%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ +EE++ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 244 LTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 303
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E +TGG VI+ G V+ ++RG NY
Sbjct: 304 RQQLEEKTGGKVIYGKGGVLFLFRGRNY 331
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 621 SGPDYDQ-------ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYREL 673
SGP Y + E +T+EE + ++ K L +G G+ +++N+H HWK R +
Sbjct: 228 SGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRV 287
Query: 674 VKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
K+ K +++ + LE ++GG +I KG L +RG+NY
Sbjct: 288 CKIKCKGVCTVDMDNVRQQLEEKTGGKVI----YGKGGVLFLFRGRNY 331
>gi|357144801|ref|XP_003573418.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like
[Brachypodium distachyon]
Length = 437
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 220 TLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLA 279
T AE T ++ +R R + ++N+ + GLT +++ IH+ W+ E VR+K V
Sbjct: 159 TPAERTFVVDKCQRNR-----TKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPT 213
Query: 280 TDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
DM+ +E +TGGL+I R G +++YRG +Y P +P
Sbjct: 214 VDMQNVCHELEDKTGGLIIHRHGGQLILYRGRHYH-PKKRP 253
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 644 RMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIA 703
R K + LG G+ ++ ++H HWK+ E V++ +++ LE ++GG++I
Sbjct: 174 RTKRQVNLGRDGLTHNMLNDIHNHWKHGEAVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 233
Query: 704 IERVPKGFALIFYRGKNY---RRPI 725
G LI YRG++Y +RP+
Sbjct: 234 RH----GGQLILYRGRHYHPKKRPV 254
>gi|302766798|ref|XP_002966819.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
gi|300164810|gb|EFJ31418.1| hypothetical protein SELMODRAFT_408011 [Selaginella moellendorffii]
Length = 672
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 626 DQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAY 685
+ E +++ E A + R+G + + F +G RG++ GV+ N+H +WK+ E V++ +
Sbjct: 121 ETEPLSEGEAAHYARIGNKNQNFASVGKRGIYGGVIHNIHTNWKFHETVRIKCPRHN--S 178
Query: 686 VEDTARL---LEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRS 742
+E+T R+ L SGGI++ V + +I +RGKNY+ P L P L +A+ R
Sbjct: 179 MEETRRIGAELARLSGGIVLD---VLEDRTVIMFRGKNYQTPEELYPPTL----EAVDRR 231
Query: 743 VAMQRHE 749
A RH
Sbjct: 232 NADSRHH 238
>gi|356495236|ref|XP_003516485.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine
max]
Length = 705
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 188 SLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINV 247
+L P + EE + +R G P E+R + P + +E+ RL + ++N+
Sbjct: 209 ALPPPDEEEVQPVRLAG--PVWESRDEVLGEP------LTKDEINRLIKATEKSSRQLNI 260
Query: 248 PKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVV 307
+ GLT +++ IH W + ++K V DM + +E RTGG +I+R + +
Sbjct: 261 GRDGLTHNMLENIHTYWMRRSACKIKCRGVCTVDMDNVCQQLEERTGGKIIYRQAGTVYL 320
Query: 308 YRGNNY 313
+RG NY
Sbjct: 321 FRGKNY 326
>gi|115475115|ref|NP_001061154.1| Os08g0188000 [Oryza sativa Japonica Group]
gi|113623123|dbj|BAF23068.1| Os08g0188000, partial [Oryza sativa Japonica Group]
Length = 361
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG VI+R +
Sbjct: 160 QINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN 219
Query: 304 VMVVYRGNNYAGPSSKPQ 321
++++YRG NY P +PQ
Sbjct: 220 ILILYRGRNY-DPKQRPQ 236
>gi|218200589|gb|EEC83016.1| hypothetical protein OsI_28075 [Oryza sativa Indica Group]
Length = 365
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG VI+R +
Sbjct: 164 QINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN 223
Query: 304 VMVVYRGNNYAGPSSKPQ 321
++++YRG NY P +PQ
Sbjct: 224 ILILYRGRNY-DPKQRPQ 240
>gi|242056645|ref|XP_002457468.1| hypothetical protein SORBIDRAFT_03g007675 [Sorghum bicolor]
gi|241929443|gb|EES02588.1| hypothetical protein SORBIDRAFT_03g007675 [Sorghum bicolor]
Length = 193
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 159 GEERLEDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGET----RRR 214
G ERL D+L R W P+ DD +LPWER++E +PA + +RR
Sbjct: 71 GTERLGDVLDRSWAWPDRQF--AATSFDDVVLPWERDDEPT------RPARDVEDGVKRR 122
Query: 215 RMKAPTLAELTIEDEELRRLRRNGMYLRERINV 247
R KAPTLAEL IEDEELRRL M R+RI V
Sbjct: 123 RGKAPTLAELMIEDEELRRL---TMTRRDRITV 152
>gi|143955290|sp|Q0J7J7.2|CAF2M_ORYSJ RecName: Full=CRS2-associated factor 2, mitochondrial; Flags:
Precursor
gi|222640037|gb|EEE68169.1| hypothetical protein OsJ_26288 [Oryza sativa Japonica Group]
Length = 366
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG VI+R +
Sbjct: 165 QINLGKGGVTHNMIDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRNIN 224
Query: 304 VMVVYRGNNYAGPSSKPQ 321
++++YRG NY P +PQ
Sbjct: 225 ILILYRGRNY-DPKQRPQ 241
>gi|326525102|dbj|BAK07821.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+ +IN+ + GLT +++ IH+ W+ E VR+K V DM+ +E +TGGL+I R
Sbjct: 181 KRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVDMQNVCHELEDKTGGLIIHRH 240
Query: 302 GSVMVVYRGNNYAGPSSKP 320
G +++YRG +Y P +P
Sbjct: 241 GGQLILYRGRHYH-PKKRP 258
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 644 RMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIA 703
R K + LG G+ ++ ++H HWK+ E V++ +++ LE ++GG++I
Sbjct: 179 RTKRQINLGRDGLTHNMLNDIHNHWKHGEGVRVKCLGVPTVDMQNVCHELEDKTGGLIIH 238
Query: 704 IERVPKGFALIFYRGKNY---RRPI 725
G LI YRG++Y +RP+
Sbjct: 239 RH----GGQLILYRGRHYHPKKRPV 259
>gi|357520913|ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
gi|355524767|gb|AET05221.1| CRS2-associated factor [Medicago truncatula]
Length = 698
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 167 LRREWV-RPNTVLREVEGEEDDSLL--PWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223
+ R W RP + + +E DS + P ++ + +++ G G + R M +
Sbjct: 110 MPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLG 169
Query: 224 LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283
+ EE+ L R+ + ++N+ + G +++ IH W++ + ++K V DM
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMD 229
Query: 284 TAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E +TGG VI+R G V+ ++RG NY
Sbjct: 230 NVCQQLEEKTGGKVIYRRGGVIYLFRGRNY 259
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E +T EE R L+ L LG G +++N+H HWK R + K+ ++
Sbjct: 170 EPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMD 229
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNYRRPISLRPR 730
+ + LE ++GG +I +G + +RG+NY RPR
Sbjct: 230 NVCQQLEEKTGGKVIYR----RGGVIYLFRGRNYNH--KTRPR 266
>gi|297792957|ref|XP_002864363.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
gi|297310198|gb|EFH40622.1| hypothetical protein ARALYDRAFT_331830 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W+K E VR+K V DM +E ++GG +++R +
Sbjct: 159 QINLGKGGVTHNMIDDIHNHWKKAEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRHIN 218
Query: 304 VMVVYRGNNYAGPSSKP 320
++V+YRG NY P S+P
Sbjct: 219 ILVLYRGRNY-DPKSRP 234
>gi|162462028|ref|NP_001105220.1| CRS2-associated factor 1, chloroplastic precursor [Zea mays]
gi|75147312|sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|30349367|gb|AAP22135.1| CRS2-associated factor 1 [Zea mays]
Length = 674
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 48/88 (54%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 185 LTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNI 244
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+E + GG VI R G V+ ++RG NY
Sbjct: 245 CHQLEEKVGGKVIHRQGGVIFLFRGRNY 272
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
D E +T EE + + L+ K L +G G+ ++EN+H HWK + + K+ K
Sbjct: 179 DILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCT 238
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
+++ LE + GG +I + G + +RG+NY
Sbjct: 239 IDMDNICHQLEEKVGGKVIHRQ----GGVIFLFRGRNY 272
>gi|194688996|gb|ACF78582.1| unknown [Zea mays]
gi|194700546|gb|ACF84357.1| unknown [Zea mays]
gi|223974875|gb|ACN31625.1| unknown [Zea mays]
Length = 560
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 74 EEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICHQ 133
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNY 313
+E + GG VI R G V+ ++RG NY
Sbjct: 134 LEEKVGGKVIHRQGGVIFLFRGRNY 158
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 624 DYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTL 683
D E +T EE + + L+ K L +G G+ ++EN+H HWK + + K+ K
Sbjct: 65 DILGEPLTKEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCT 124
Query: 684 AYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY 721
+++ LE + GG +I + G + +RG+NY
Sbjct: 125 IDMDNICHQLEEKVGGKVIHRQ----GGVIFLFRGRNY 158
>gi|218188278|gb|EEC70705.1| hypothetical protein OsI_02075 [Oryza sativa Indica Group]
Length = 701
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 185 LTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNV 244
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E + GG VI G V+ ++RG NY
Sbjct: 245 CQQLEEKVGGKVIHHQGGVIFLFRGRNY 272
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E +T EE + L+ K L +G G+ ++EN+H HWK + + K+ K ++
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNYR---RPI 725
+ + LE + GG +I + G + +RG+NY RPI
Sbjct: 243 NVCQQLEEKVGGKVIHHQ----GGVIFLFRGRNYNYRTRPI 279
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 399 PKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWE 458
P Y + +P G LT E D+R+ R LP LG+N + L + + +E
Sbjct: 287 PAAPVYPRLVKKIPDG----LTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFE 342
Query: 459 KSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDF---LPP 510
+ ++ G+ ++ + + +LK L TLL +I+++RG D+ LPP
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPP 396
>gi|115436730|ref|NP_001043122.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|75109409|sp|Q5VMQ5.1|CAF1P_ORYSJ RecName: Full=CRS2-associated factor 1, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 1; Flags: Precursor
gi|55297418|dbj|BAD69270.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|55297612|dbj|BAD68987.1| putative CRS2-associated factor 1 [Oryza sativa Japonica Group]
gi|113532653|dbj|BAF05036.1| Os01g0495900 [Oryza sativa Japonica Group]
gi|215694476|dbj|BAG89423.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618506|gb|EEE54638.1| hypothetical protein OsJ_01906 [Oryza sativa Japonica Group]
Length = 701
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+ EE+ L + + + ++N+ + GLT +++ IH W++ + ++K V DM
Sbjct: 185 LTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNV 244
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +E + GG VI G V+ ++RG NY
Sbjct: 245 CQQLEEKVGGKVIHHQGGVIFLFRGRNY 272
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 628 ETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVE 687
E +T EE + L+ K L +G G+ ++EN+H HWK + + K+ K ++
Sbjct: 183 EPLTKEEVDELVKATLKTKRQLNIGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMD 242
Query: 688 DTARLLEYESGGILIAIERVPKGFALIFYRGKNYR---RPI 725
+ + LE + GG +I + G + +RG+NY RPI
Sbjct: 243 NVCQQLEEKVGGKVIHHQ----GGVIFLFRGRNYNYRTRPI 279
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 399 PKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWE 458
P Y + +P G LT E D+R+ R LP LG+N + L + + +E
Sbjct: 287 PAAPVYPRLVKKIPDG----LTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFE 342
Query: 459 KSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDF---LPP 510
+ ++ G+ ++ + + +LK L TLL +I+++RG D+ LPP
Sbjct: 343 ACDLVRVDCS-GLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPP 396
>gi|224130086|ref|XP_002320749.1| predicted protein [Populus trichocarpa]
gi|222861522|gb|EEE99064.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+++IN+ GLT +++ IH+ W+ DE VR+K V DMK +E +T G +I R
Sbjct: 175 KKQINLGIDGLTHNMLNDIHNHWKHDEAVRVKCMGVPTVDMKNVCTQLEDKTFGKIIHRH 234
Query: 302 GSVMVVYRGNNYAGPSSKP 320
++V+YRG NY P ++P
Sbjct: 235 CGLLVLYRGRNYH-PRNRP 252
>gi|449468496|ref|XP_004151957.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
gi|449489970|ref|XP_004158472.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Cucumis
sativus]
Length = 358
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 210 ETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDEL 269
E R+R + P L E E EL R+ R+ IN+ K G+T +++ IH+ W++ E
Sbjct: 134 EERKRILGDPLLDE---EVAELVEQYRHSDCSRQ-INLGKGGVTHNMLDDIHNHWKRAEA 189
Query: 270 VRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
VR+K V DM +E ++GG +I+R +++++YRG NY P ++P
Sbjct: 190 VRIKCLGVPTLDMDNICFHLEDKSGGKIIYRHINILLLYRGRNY-DPKNRP 239
>gi|356530475|ref|XP_003533806.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 388
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W+K E+VR+K V DM +E ++GG VI+R +
Sbjct: 162 QINLGKGGVTHNMLGDIHNHWKKAEVVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN 221
Query: 304 VMVVYRGNNY 313
++++YRG NY
Sbjct: 222 ILLLYRGRNY 231
>gi|255563935|ref|XP_002522967.1| conserved hypothetical protein [Ricinus communis]
gi|223537779|gb|EEF39397.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 210 ETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDEL 269
E RRR + P LT E+ E R +IN+ K G+T +++ IH+ W+K E
Sbjct: 175 EERRRVLGDP----LTEEEVEELVERYRHSDCSRQINLGKGGVTHNMLDDIHNHWKKAEA 230
Query: 270 VRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
VR+K V DM +E ++GG +I+R +++++YRG NY P ++P
Sbjct: 231 VRIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHINILLLYRGRNY-DPKNRP 280
>gi|449478585|ref|XP_004155360.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 603
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+++ E+R L + + ++N+ + GLT +++ IH W++ + +++ V DM
Sbjct: 242 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 301
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+E +TGG +I R G V+ ++RG NY
Sbjct: 302 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 329
>gi|449434945|ref|XP_004135256.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Cucumis sativus]
Length = 602
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+++ E+R L + + ++N+ + GLT +++ IH W++ + +++ V DM
Sbjct: 241 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 300
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+E +TGG +I R G V+ ++RG NY
Sbjct: 301 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 328
>gi|307135966|gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
Length = 603
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%)
Query: 226 IEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTA 285
+++ E+R L + + ++N+ + GLT +++ IH W++ + +++ V DM
Sbjct: 242 LKNWEIRMLVKPHLSHNRQVNLGRDGLTHNMLELIHSHWKRQRVCKVRCKGVPTVDMDNI 301
Query: 286 HEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+E +TGG +I R G V+ ++RG NY
Sbjct: 302 CHHIEEKTGGKIIHRVGGVLYLFRGRNY 329
>gi|242080803|ref|XP_002445170.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
gi|241941520|gb|EES14665.1| hypothetical protein SORBIDRAFT_07g005220 [Sorghum bicolor]
Length = 353
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG VI+R+ +
Sbjct: 165 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVIYRSIN 224
Query: 304 VMVVYRGNNY 313
++++YRG NY
Sbjct: 225 IIILYRGRNY 234
>gi|255541412|ref|XP_002511770.1| conserved hypothetical protein [Ricinus communis]
gi|223548950|gb|EEF50439.1| conserved hypothetical protein [Ricinus communis]
Length = 411
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 203 GGEKPAGETRRR------RMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDV 256
G E P E +RR + + T AE I E +R + +++IN+ + GLT ++
Sbjct: 135 GSENPNLEEKRRWWREQIQGQPLTNAERKILVESCQRHK-----TKKQINLGRDGLTHNM 189
Query: 257 MRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGP 316
+ IH+ W+ E VR+K V DMK +E +T G +I R ++V+YRG NY P
Sbjct: 190 LNDIHNHWKHAEAVRIKCLGVPTVDMKNVCTQLEDKTFGKIIHRHCGLLVLYRGRNYH-P 248
Query: 317 SSKP 320
+P
Sbjct: 249 KKRP 252
>gi|356496030|ref|XP_003516873.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Glycine
max]
Length = 358
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W+K E VR+K V DM +E ++GG VI+R +
Sbjct: 162 QINLGKGGVTHNMLGDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVIYRNIN 221
Query: 304 VMVVYRGNNY 313
++++YRG NY
Sbjct: 222 ILLLYRGRNY 231
>gi|356524038|ref|XP_003530640.1| PREDICTED: CRS2-associated factor 2, chloroplastic-like [Glycine
max]
Length = 593
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+ L + M ++N+ + GLT +++ IH W++ + +++ V DM +
Sbjct: 201 EIHMLVKPMMSYNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCLGVPTVDMDNVCHHI 260
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
E +TGG +I R G V+ ++RG NY S++PQ
Sbjct: 261 EEKTGGKIIHRVGGVVYLFRGRNYNY-STRPQ 291
>gi|168040806|ref|XP_001772884.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675795|gb|EDQ62286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 463
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 167 LRREWV-RPNTVLREVEGEEDDSL--LPWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223
+ R W RP + + E DS P R+ + ++A G P G+ + +
Sbjct: 29 VNRPWTGRPPLAKSKKKPREFDSFNPPPIGRKGVKPVQAPGPYPEGQGPKLGRSREEILG 88
Query: 224 LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283
+ E+R L +IN+ + GLT +++ +H+ W++ + ++K V DM
Sbjct: 89 APLTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMD 148
Query: 284 TAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
++E +TGG +I R G + ++RG NY
Sbjct: 149 NVCRVLEEKTGGKIILRQGGAVYLFRGRNY 178
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 11/75 (14%)
Query: 658 DGVVENM----HLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKGFAL 713
DG+ NM H HWK R + K+ K +++ R+LE ++GG +I + +G A+
Sbjct: 115 DGLTHNMLNLVHEHWKRRRVCKVKCKGVPTVDMDNVCRVLEEKTGGKII----LRQGGAV 170
Query: 714 IFYRGKNYR---RPI 725
+RG+NY RP+
Sbjct: 171 YLFRGRNYNYKTRPV 185
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 419 LTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRGIQNTNNKL 478
LT+AE+ +L AR P LGR+ + + + W++ V K+ K G+ +
Sbjct: 91 LTSAEVRELVTKARKEPRQINLGRDGLTHNMLNLVHEHWKRRRVCKVKCK-GVPTVDMDN 149
Query: 479 MAEELKSLTGGTLLQRNKFYIVLYRGKDF 507
+ L+ TGG ++ R + L+RG+++
Sbjct: 150 VCRVLEEKTGGKIILRQGGAVYLFRGRNY 178
>gi|225425575|ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
gi|297739063|emb|CBI28552.3| unnamed protein product [Vitis vinifera]
Length = 561
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 209 GETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDE 268
G TR + P + E+R L + + ++N+ + GLT +++ IH W++
Sbjct: 185 GRTREEILGEP------LSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQR 238
Query: 269 LVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ +++ V DM +E +TGG +I R G V+ ++RG NY
Sbjct: 239 VCKVRCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
>gi|225461009|ref|XP_002278505.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like [Vitis
vinifera]
Length = 452
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM+ +E + GG +I+R +
Sbjct: 168 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNIN 227
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P ++P
Sbjct: 228 IILLYRGRNY-DPKNRP 243
>gi|357144748|ref|XP_003573400.1| PREDICTED: CRS2-associated factor 2, mitochondrial-like
[Brachypodium distachyon]
Length = 365
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG +I R+ +
Sbjct: 164 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVATLDMDNICFHLEDKTGGKIIHRSIN 223
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P +P
Sbjct: 224 ILILYRGRNY-DPKQRP 239
>gi|224124340|ref|XP_002319307.1| predicted protein [Populus trichocarpa]
gi|222857683|gb|EEE95230.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E ++GG V++R +
Sbjct: 159 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKVVYRNIN 218
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P ++P
Sbjct: 219 ILLLYRGRNY-DPENRP 234
>gi|317106625|dbj|BAJ53131.1| JHL05D22.2 [Jatropha curcas]
Length = 415
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 242 RERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRA 301
+ +IN+ + GLT +++ IH+ W+ E VR+K V DMK +E +T G +I R
Sbjct: 180 KRQINLGRDGLTHNMLNDIHNHWKHAEAVRIKCLGVPTVDMKNVCSQLEDKTFGKIIHRH 239
Query: 302 GSVMVVYRGNNYAGPSSKP 320
+V+YRG NY P +P
Sbjct: 240 CGSLVLYRGRNY-NPKKRP 257
>gi|297737420|emb|CBI26621.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM+ +E + GG +I+R +
Sbjct: 149 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMENVCFHLEDKCGGKIIYRNIN 208
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P ++P
Sbjct: 209 IILLYRGRNY-DPKNRP 224
>gi|356560247|ref|XP_003548405.1| PREDICTED: CRS2-associated factor 1, mitochondrial-like [Glycine
max]
Length = 396
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
+N+ + GLT +++ IH+ W+ E VR+K V DM +E +T G VI+R G
Sbjct: 180 VNLGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRHGGT 239
Query: 305 MVVYRGNNYAGPSSKP 320
+++YRG NY P +P
Sbjct: 240 LILYRGRNY-NPKKRP 254
>gi|413921149|gb|AFW61081.1| hypothetical protein ZEAMMB73_173916 [Zea mays]
Length = 291
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG V+ R+ +
Sbjct: 161 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSIN 220
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P +P
Sbjct: 221 IIILYRGRNY-DPQKRP 236
>gi|226530577|ref|NP_001147995.1| LOC100281604 [Zea mays]
gi|195615022|gb|ACG29341.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG V+ R+ +
Sbjct: 161 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSIN 220
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P +P
Sbjct: 221 IIILYRGRNY-DPQKRP 236
>gi|255568848|ref|XP_002525395.1| conserved hypothetical protein [Ricinus communis]
gi|223535358|gb|EEF37033.1| conserved hypothetical protein [Ricinus communis]
Length = 561
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E+++L + + ++N+ + GLT +++ IH WR+ + +++ + DM +
Sbjct: 196 EIKQLVKPLLSDNRQVNLGRDGLTHNMLELIHSHWRRSPVCKVRCKGIPTVDMNNICRHL 255
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNY 313
E RTGG +I+R G V+ ++ G NY
Sbjct: 256 EERTGGKIIYRIGGVVYLFCGRNY 279
>gi|168014860|ref|XP_001759969.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688719|gb|EDQ75094.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 297
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 229 EELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI 288
+E+R L R R+++ K GLT +++ +H W++ + R+K + V DM +
Sbjct: 92 DEVRELVGRACAERRRLDLGKDGLTHNMLELLHRHWKRRRVCRIKCYGVPTVDMDNLCRV 151
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQ 321
+E ++GG +I R+ ++ V+RG NY +++PQ
Sbjct: 152 IEEKSGGKIIRRSQGMLYVFRGRNYNW-NTRPQ 183
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 649 LPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVP 708
L LG G+ ++E +H HWK R + ++ +++ R++E +SGG +I R
Sbjct: 108 LDLGKDGLTHNMLELLHRHWKRRRVCRIKCYGVPTVDMDNLCRVIEEKSGGKII---RRS 164
Query: 709 KGFALIFYRGKNY 721
+G +F RG+NY
Sbjct: 165 QGMLYVF-RGRNY 176
>gi|238014734|gb|ACR38402.1| unknown [Zea mays]
gi|413921148|gb|AFW61080.1| CRS2-associated factor 1 [Zea mays]
Length = 362
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
+IN+ K G+T +++ IH+ W++ E VR+K V DM +E +TGG V+ R+ +
Sbjct: 161 QINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNICFHLEDKTGGKVVSRSIN 220
Query: 304 VMVVYRGNNYAGPSSKP 320
++++YRG NY P +P
Sbjct: 221 IIILYRGRNY-DPQKRP 236
>gi|359473240|ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
chloroplastic-like [Vitis vinifera]
Length = 560
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 209 GETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDE 268
G TR + P + E+R L + + ++N+ + GLT +++ IH W++
Sbjct: 185 GRTREEILGEP------LSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQR 238
Query: 269 LVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ ++ V DM +E +TGG +I R G V+ ++RG NY
Sbjct: 239 VCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 283
>gi|22329751|ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName:
Full=Chloroplastic group IIA intron splicing facilitator
CRS2-associated factor 2; Flags: Precursor
gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4 [Arabidopsis thaliana]
gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27 [Arabidopsis thaliana]
gi|17065312|gb|AAL32810.1| Unknown protein [Arabidopsis thaliana]
gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis thaliana]
gi|332192262|gb|AEE30383.1| CRS2-associated factor 2 [Arabidopsis thaliana]
Length = 564
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
L + M+ ++N+ + G T +++ IH W++ + +++ V DM ++E +T
Sbjct: 211 LIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKT 270
Query: 294 GGLVIWRAGSVMVVYRGNNY 313
GG +I R G V+ ++RG NY
Sbjct: 271 GGEIIHRVGGVVYLFRGRNY 290
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG G ++E +H HWK R + K+ K + + R+LE ++GG + I RV G
Sbjct: 224 LGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMNNVCRVLEEKTGGEI--IHRV--G 279
Query: 711 FALIFYRGKNY 721
+ +RG+NY
Sbjct: 280 GVVYLFRGRNY 290
>gi|297850808|ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
gi|297339127|gb|EFH69544.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%)
Query: 234 LRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRT 293
L + M+ ++N+ + G T +++ IH W++ + +++ V DM ++E +T
Sbjct: 213 LIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKT 272
Query: 294 GGLVIWRAGSVMVVYRGNNY 313
GG +I R G V+ ++RG NY
Sbjct: 273 GGEIIHRVGGVVYLFRGRNY 292
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG G ++E +H HWK R + K+ K +++ R+LE ++GG + I RV G
Sbjct: 226 LGRDGFTHNMLELIHSHWKRRRVCKVRCKGVPTVDMDNVCRVLEEKTGGEI--IHRV--G 281
Query: 711 FALIFYRGKNY 721
+ +RG+NY
Sbjct: 282 GVVYLFRGRNY 292
>gi|297739073|emb|CBI28562.3| unnamed protein product [Vitis vinifera]
Length = 422
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 209 GETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDE 268
G TR + P + E+R L + + ++N+ + GLT +++ IH W++
Sbjct: 52 GRTREEILGEP------LSKAEIRMLVKPYLSHNRQVNLGRDGLTHNMLELIHSHWKRQR 105
Query: 269 LVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNY 313
+ ++ V DM +E +TGG +I R G V+ ++RG NY
Sbjct: 106 VCKVWCKGVPTIDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNY 150
>gi|159469243|ref|XP_001692777.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278030|gb|EDP03796.1| predicted protein [Chlamydomonas reinhardtii]
Length = 321
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 250 AGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEI---VERRTGGLVIWRAGSVMV 306
+GL V+ + WR ELV+L+ M ++ +E+RTGGLV+WRAG +
Sbjct: 144 SGLNASVLTSVASAWRNSELVKLRIVSRANKYMPYITQVCAALEQRTGGLVVWRAGGSIW 203
Query: 307 VYRGNNY--AGPSSKP 320
++RG Y A PS +P
Sbjct: 204 LFRGAGYDAASPSGRP 219
>gi|302763677|ref|XP_002965260.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
gi|302809791|ref|XP_002986588.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300145771|gb|EFJ12445.1| hypothetical protein SELMODRAFT_42935 [Selaginella moellendorffii]
gi|300167493|gb|EFJ34098.1| hypothetical protein SELMODRAFT_62891 [Selaginella moellendorffii]
Length = 366
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 244 RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGS 303
++N+ K GLT +++ IH W++ +++L+ V DM +E +TGG +I R G
Sbjct: 112 QVNIGKDGLTHNMLDLIHCHWKRRRVIKLRCKGVPTIDMDNVCFHIEDKTGGKIIQRHGG 171
Query: 304 VMVVYRGNNYAGPSSKPQ 321
+ ++RG NY P +P+
Sbjct: 172 SIYLFRGRNY-NPRYRPE 188
>gi|224110940|ref|XP_002315689.1| predicted protein [Populus trichocarpa]
gi|222864729|gb|EEF01860.1| predicted protein [Populus trichocarpa]
Length = 506
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%)
Query: 230 ELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIV 289
E++ L + + ++N+ + GLT +++ +H W++ + +++ V DM +
Sbjct: 146 EIKLLIKPHLSDNRQVNLGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHL 205
Query: 290 ERRTGGLVIWRAGSVMVVYRGNNY 313
E +TGG +I R G V+ ++RG NY
Sbjct: 206 EEKTGGKIIHRVGGVVYLFRGRNY 229
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 651 LGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYESGGILIAIERVPKG 710
LG G+ ++E +H HWK R + K+ K +++ R LE ++GG + I RV G
Sbjct: 163 LGEDGLTHNMLELVHSHWKRRRVCKVRCKGVPTVDMDNVCRHLEEKTGGKI--IHRV--G 218
Query: 711 FALIFYRGKNY 721
+ +RG+NY
Sbjct: 219 GVVYLFRGRNY 229
>gi|297802930|ref|XP_002869349.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315185|gb|EFH45608.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEE---LRRLRRNGMYLRERINVPKAGLTQDVMRK 259
G E P E +RR+++ E E + +RN + ++N+ + GLT +++
Sbjct: 138 GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKT--KRQVNLGRDGLTHNMLND 195
Query: 260 IHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK 319
I++ W+ E VR+K V DMK +E +T G V+ + +V+YRG NY P +
Sbjct: 196 IYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHCGTLVLYRGRNY-DPKKR 254
Query: 320 PQ-PLDGDGDTLFVPH 334
P+ PL L+ PH
Sbjct: 255 PKIPL-----MLWKPH 265
>gi|22329043|ref|NP_194830.2| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|75161464|sp|Q8VYD9.1|CAF1M_ARATH RecName: Full=CRS2-associated factor 1, mitochondrial; Flags:
Precursor
gi|18176015|gb|AAL59968.1| unknown protein [Arabidopsis thaliana]
gi|20465409|gb|AAM20129.1| unknown protein [Arabidopsis thaliana]
gi|332660446|gb|AEE85846.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 405
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEE---LRRLRRNGMYLRERINVPKAGLTQDVMRK 259
G E P E +RR+++ E E + +RN + ++N+ + GLT +++
Sbjct: 137 GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKT--KRQVNLGRDGLTHNMLND 194
Query: 260 IHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK 319
+++ W+ E VR+K V DMK +E +T G V+ + +V+YRG NY P +
Sbjct: 195 VYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY-DPKKR 253
Query: 320 PQ-PLDGDGDTLFVPH 334
P+ PL L+ PH
Sbjct: 254 PKIPL-----MLWKPH 264
>gi|14596153|gb|AAK68804.1| Unknown protein [Arabidopsis thaliana]
Length = 284
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEE---LRRLRRNGMYLRERINVPKAGLTQDVMRK 259
G E P E +RR+++ E E + +RN + ++N+ + GLT +++
Sbjct: 137 GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKT--KRQVNLGRDGLTHNMLND 194
Query: 260 IHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK 319
+++ W+ E VR+K V DMK +E +T G V+ + +V+YRG NY P +
Sbjct: 195 VYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY-DPKKR 253
Query: 320 PQ-PLDGDGDTLFVPH 334
P+ PL L+ PH
Sbjct: 254 PKIPL-----MLWKPH 264
>gi|2980765|emb|CAA18192.1| hypothetical protein [Arabidopsis thaliana]
gi|7270003|emb|CAB79819.1| hypothetical protein [Arabidopsis thaliana]
Length = 392
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEE---LRRLRRNGMYLRERINVPKAGLTQDVMRK 259
G E P E +RR+++ E E + +RN + ++N+ + GLT +++
Sbjct: 137 GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKT--KRQVNLGRDGLTHNMLND 194
Query: 260 IHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK 319
+++ W+ E VR+K V DMK +E +T G V+ + +V+YRG NY P +
Sbjct: 195 VYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY-DPKKR 253
Query: 320 PQ 321
P+
Sbjct: 254 PK 255
>gi|42573097|ref|NP_974645.1| CRS2-associated factor 1 [Arabidopsis thaliana]
gi|332660445|gb|AEE85845.1| CRS2-associated factor 1 [Arabidopsis thaliana]
Length = 341
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 203 GGEKPAGETRRRRMKAPTLAELTIEDEE---LRRLRRNGMYLRERINVPKAGLTQDVMRK 259
G E P E +RR+++ E E + +RN + ++N+ + GLT +++
Sbjct: 137 GVEDPKLEEKRRKVREKIQGASLTEAERKFLVELCQRNKT--KRQVNLGRDGLTHNMLND 194
Query: 260 IHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSK 319
+++ W+ E VR+K V DMK +E +T G V+ + +V+YRG NY P +
Sbjct: 195 VYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRGRNY-DPKKR 253
Query: 320 PQ 321
P+
Sbjct: 254 PK 255
>gi|194704400|gb|ACF86284.1| unknown [Zea mays]
Length = 130
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 589 LVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAMFRRVGLRMKAF 648
+ K +E +L+ + A+K +AE+L+ ++E + P +ETI+++ER M R+VGL+MK F
Sbjct: 37 VAKDVETRLSQAIAEKAKAEKLIEELEKAS-PLSKAEVRETISEDERYMLRKVGLKMKQF 95
Query: 649 LPLG 652
L LG
Sbjct: 96 LLLG 99
>gi|414589365|tpg|DAA39936.1| TPA: putative protein phosphatase 2A family protein [Zea mays]
Length = 170
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 8/56 (14%)
Query: 289 VERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDGDGDT-------LFVPHVSS 337
++RRTG L++WR GSVMVVYRG+ Y P K Q L+G + LF+P+ S+
Sbjct: 93 LKRRTGELIMWRPGSVMVVYRGSIYKRP-LKSQALNGASSSVKGEFGALFIPNASN 147
>gi|302759655|ref|XP_002963250.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
gi|300168518|gb|EFJ35121.1| hypothetical protein SELMODRAFT_404989 [Selaginella moellendorffii]
Length = 274
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 623 PDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKT 682
P +D E ++ E + + FL +G RGV++G + +++ HW E +++ +
Sbjct: 93 PVHDPEYLSPEFMTALKERNRCIDDFLTIGKRGVWEGFIRDIYSHWINHETLRIYCEGYP 152
Query: 683 LAYVEDTARLLEYESGGILIAIERVPKGFALIFYRGKNY---RRPISLRPRNLLTKAKAL 739
L + A + SG ++IA+ + + I YRG+N+ +P S R N+L K KAL
Sbjct: 153 LRKLRPMAEKVARMSGAVVIAV--TEETMSFILYRGRNFSHGYQPPS-RIENMLNKGKAL 209
Query: 740 KRSVAMQRHEALSQHISDLENTIEQMK 766
K+++ ++ + L +++ +L I + +
Sbjct: 210 KKALLLKSLQHLYRNVRELTERIHKHR 236
>gi|307106930|gb|EFN55174.1| hypothetical protein CHLNCDRAFT_52520 [Chlorella variabilis]
Length = 187
Score = 46.2 bits (108), Expect = 0.080, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 231 LRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVE 290
L++LRR+G+ L++ I + + G + + +++ R+ H A +MK + +E
Sbjct: 68 LKQLRRDGLALKDVIKLGRRGPAEGL---------ANQVARVYCHGKHAANMKVLVQQLE 118
Query: 291 RRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLDG 325
TGG+V+ +AG +++YRG+ + G + QPL G
Sbjct: 119 AATGGMVVHKAGGTVLLYRGDGWQGGA---QPLAG 150
>gi|9837554|gb|AAG00597.1| CRS1 [Zea mays]
Length = 235
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 184 EEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAELTIEDEELRRLRRNGMYLRE 243
+E +PW +E L+ R ++ + PT AE +E EL RLRR +
Sbjct: 134 KEKSRAVPWAAARDEGLKVALR------REKKPREPTRAETELETHELHRLRRLARGIGR 187
Query: 244 RINVPKAGLTQDVMRKIHDKWRK-DELVRLKFHEVLATDMKTAHEIVE 290
KAG+T +V++++ +W +EL ++ E L M A EI+E
Sbjct: 188 WARAKKAGVTDEVVKEVRREWASGEELAAVRIVEPLRRSMDRAREILE 235
>gi|297603821|ref|NP_001054631.2| Os05g0145300 [Oryza sativa Japonica Group]
gi|255676015|dbj|BAF16545.2| Os05g0145300, partial [Oryza sativa Japonica Group]
Length = 92
Score = 41.2 bits (95), Expect = 2.3, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 600 SQAKKLRAERLLAKIEASMVPS--GPDYDQETITDEERAMFRRVGLRMKAFLPLGIRGVF 657
S K + LL K++ +P P +D E +T E+ ++++G R + ++P+G+RGVF
Sbjct: 8 SGGAKKKVALLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVF 67
Query: 658 DGVVENMHLHWKYRELVKL 676
GVV+NMH+HWK+ E V++
Sbjct: 68 GGVVQNMHMHWKFHETVQV 86
>gi|114321127|ref|YP_742810.1| hypothetical protein Mlg_1978 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227521|gb|ABI57320.1| protein of unknown function UPF0044 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 100
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 224 LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283
+ + + + R LRR L+ + AGLT+ VM +I EL+++K + D +
Sbjct: 1 MRLNESQRRHLRRLAHDLKPVVRTGNAGLTEAVMAEIELALESHELIKVKLVGLERADRQ 60
Query: 284 TAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
E + TG ++ + G V V+YR N P KP
Sbjct: 61 PTIEQICVETGAELVQKVGQVAVLYRAN----PRRKP 93
>gi|307719428|ref|YP_003874960.1| hypothetical protein STHERM_c17520 [Spirochaeta thermophila DSM
6192]
gi|306533153|gb|ADN02687.1| hypothetical protein STHERM_c17520 [Spirochaeta thermophila DSM
6192]
Length = 104
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 245 INVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMKTAHEIVERRTGGLVIWRAGSV 304
+ V KAGL + V R +HD ++ELV+++F A E+ E R G L++ G V
Sbjct: 23 VYVGKAGLAEGVFRALHDALERNELVKVRFVAWKDEREDLARELAE-RLGALLVAVIGHV 81
Query: 305 MVVYR 309
V YR
Sbjct: 82 AVFYR 86
>gi|189212014|ref|XP_001942334.1| signal recognition particle receptor subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187979533|gb|EDU46159.1| signal recognition particle receptor subunit alpha [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1338
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 34 SSSRKTPSFQLLKPFSSLRTNQNPRTDSQNQQFPKPR-------SPSTSAPWLNNWSRPK 86
+S TPS +L+ P SS + T + KP+ + ST P + SRP
Sbjct: 132 ASDSGTPSIKLITPESSTDNDSADETALKPPGLQKPQPSLYDTSADSTPVPTPDT-SRPT 190
Query: 87 PPS-----TENANKLGGR-NQIDEKQTSPDSYPRYSDSDNKGRNAIERIVLRLRNLG-LG 139
P+ T A LGG+ ++ D+K+ S S S D + + R G G
Sbjct: 191 TPAQSQLLTGKARPLGGKISRRDKKKASAFSSAPVSSGDEASAKKKGKGSKKGRVWGEFG 250
Query: 140 SDDEEEG--EEEEDDINGAATGEERLEDLLRREWVRPNT----VLREVEGEEDDSLLPWE 193
+D+E++ + DI G +G E LE++ + W R VLR+++ E D +
Sbjct: 251 ADEEDDSVLDYSRSDIQGDVSGNEALEEIKQETWGRKTNKGEFVLRDLDDEMDAII---- 306
Query: 194 REEEENLRAGGEKPAGET 211
E+N + + PA +
Sbjct: 307 --AEQNAKKDKDTPAAAS 322
>gi|302678293|ref|XP_003028829.1| hypothetical protein SCHCODRAFT_111781 [Schizophyllum commune H4-8]
gi|300102518|gb|EFI93926.1| hypothetical protein SCHCODRAFT_111781 [Schizophyllum commune H4-8]
Length = 1067
Score = 40.0 bits (92), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 78 WLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDSYPRYSDSDNKGR-NAIERIVLRLRNL 136
+L+ +R PP + KL R QI + + Y D +++ R +AI R++ L+N
Sbjct: 635 YLSTVTRQHPPLQQ---KLRRRKQIASAMSQ--AAASYQDKEDRERWSAISRVLDELKND 689
Query: 137 GLGSDDEEEGEEEEDDINGAATGEERLEDLLRREWVRP--NTVLREVE 182
G+ +EE + EE +++G EER +L EW P +L EV+
Sbjct: 690 GMS---DEESDNEEIELSGGVVSEERYRKVLEMEWRHPALRCILDEVD 734
>gi|159489570|ref|XP_001702770.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280792|gb|EDP06549.1| predicted protein [Chlamydomonas reinhardtii]
Length = 267
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 224 LTIEDEELRRLRRNGMYLRE---RINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLAT 280
+ I+D +L R R + + R+ V + G+T +R D +K LVR+K E
Sbjct: 115 MHIKDRKLWRARAEALAKEKKLIRVQVGQLGITPAFLRATSDVLQKHGLVRVKLGEGSGV 174
Query: 281 DMKTAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKPQPLD 324
+ A +++ER + + + G + +YR P++ QPL+
Sbjct: 175 ERANAADVLERYLDAVCVHQIGFTITLYRRQGLPRPTNT-QPLN 217
>gi|332288658|ref|YP_004419510.1| RNA-binding protein YhbY [Gallibacterium anatis UMN179]
gi|330431554|gb|AEC16613.1| RNA-binding protein YhbY [Gallibacterium anatis UMN179]
Length = 100
Score = 39.3 bits (90), Expect = 8.7, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 224 LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283
LT+ ++ + L+ +L + + GLT+ V+ +I + EL+++K V + +
Sbjct: 3 LTLSTKQKQYLKGLAHHLNPVVMLGGNGLTEGVIAEIDNALNHHELIKVKISGVDREEKE 62
Query: 284 TAHEIVERRTGGLVIWRAGSVMVVYRGNNYAGPSSKP 320
+ER TG + R G ++V+YR PS +P
Sbjct: 63 LVVAAIERETGACAVQRIGHILVLYR------PSDEP 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,475,967,548
Number of Sequences: 23463169
Number of extensions: 613203276
Number of successful extensions: 2410440
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 955
Number of HSP's that attempted gapping in prelim test: 2399725
Number of HSP's gapped (non-prelim): 8247
length of query: 833
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 682
effective length of database: 8,816,256,848
effective search space: 6012687170336
effective search space used: 6012687170336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)