BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036296
         (433 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1BWU|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 109

 Score = 37.4 bits (85), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW +N   P ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWSSNTDIPGKKGCKAVLQSDGNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNVVIY- 98

Query: 149 SKGNFIWQSFDY 160
             G+ IW +  Y
Sbjct: 99  --GSDIWSTNTY 108


>pdb|1BWU|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 109

 Score = 37.0 bits (84), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW +N   P ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWSSNTDIPGKKGCKAVLQSDGNFVVYDAEGASLWASHSVRGNGNYVLVLQEDGNVVIYR 99

Query: 149 SKGNFIWQSFDY 160
           S    IW +  Y
Sbjct: 100 SD---IWSTNTY 108


>pdb|1KJ1|D Chain D, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
 pdb|1KJ1|Q Chain Q, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 109

 Score = 36.2 bits (82), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW  N   P ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWTTNTDIPGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY- 98

Query: 149 SKGNFIWQSFDY 160
             G+ IW +  Y
Sbjct: 99  --GSDIWSTNTY 108


>pdb|1KJ1|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
 pdb|1KJ1|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 109

 Score = 35.0 bits (79), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW +N G   ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY- 98

Query: 149 SKGNFIWQSFDY 160
             G+ IW +  Y
Sbjct: 99  --GSDIWSTGTY 108


>pdb|2DPF|A Chain A, Crystal Structure Of Curculin1 Homodimer
 pdb|2DPF|B Chain B, Crystal Structure Of Curculin1 Homodimer
 pdb|2DPF|C Chain C, Crystal Structure Of Curculin1 Homodimer
 pdb|2DPF|D Chain D, Crystal Structure Of Curculin1 Homodimer
          Length = 115

 Score = 34.7 bits (78), Expect = 0.093,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 104 TFSLGTDGNLVLAEADGTVVWQTNTANKGV-VGFKLLSNGNMVLHDSKGNFIWQS 157
           T ++    NLV  + +G  +W +NT  +G      LLS+GN+V++D   N +W S
Sbjct: 23  TLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS 76


>pdb|2D04|B Chain B, Crystal Structure Of Neoculin, A Sweet Protein With
           Taste-Modifying Activity.
 pdb|2D04|D Chain D, Crystal Structure Of Neoculin, A Sweet Protein With
           Taste-Modifying Activity.
 pdb|2D04|F Chain F, Crystal Structure Of Neoculin, A Sweet Protein With
           Taste-Modifying Activity.
 pdb|2D04|H Chain H, Crystal Structure Of Neoculin, A Sweet Protein With
           Taste-Modifying Activity
          Length = 114

 Score = 34.7 bits (78), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 104 TFSLGTDGNLVLAEADGTVVWQTNTANKGV-VGFKLLSNGNMVLHDSKGNFIWQS 157
           T ++    NLV  + +G  +W +NT  +G      LLS+GN+V++D   N +W S
Sbjct: 22  TLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS 75


>pdb|3M7H|A Chain A, Crystal Structure Of The Bacteriocin Llpa From Pseudomonas
           Sp.
 pdb|3M7H|B Chain B, Crystal Structure Of The Bacteriocin Llpa From Pseudomonas
           Sp.
 pdb|3M7J|A Chain A, Crystal Structure Of The Bacteriocin Llpa From Pseudomonas
           Sp. In Complex With Met-Mannose
 pdb|3M7J|B Chain B, Crystal Structure Of The Bacteriocin Llpa From Pseudomonas
           Sp. In Complex With Met-Mannose
          Length = 276

 Score = 34.7 bits (78), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 23/48 (47%)

Query: 110 DGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNFIWQS 157
           DGNLV    +G   W   T  KG V      +GN+V++ +    +W S
Sbjct: 173 DGNLVAYGPNGAATWNAGTQGKGAVRAVFQGDGNLVVYGAGNAVLWHS 220



 Score = 33.1 bits (74), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 110 DGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDY 160
           DGNLV+  A   V+W ++T        +L +NG++ + D K   +W  F +
Sbjct: 204 DGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDEKP--VWARFGF 252


>pdb|4H3O|A Chain A, Crystal Structure Of A New Form Of Lectin From Allium
           Sativum At 2.17 A Resolution
 pdb|4H3O|B Chain B, Crystal Structure Of A New Form Of Lectin From Allium
           Sativum At 2.17 A Resolution
          Length = 105

 Score = 34.3 bits (77), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 105 FSLGTDGNLVLAEADGTVVWQTNTANKGVVGFK--LLSNGNMVLHDSKGNFIWQS 157
           F +  D NLVL +   T  W +NT   G  G    L S+GN V++DS G  +W S
Sbjct: 23  FIMQDDCNLVLYD-HSTSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWAS 76


>pdb|1BWU|P Chain P, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 106

 Score = 33.9 bits (76), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW +N G   ++     L  DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWASNTGILGKKGCKAVLQADGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIY- 98

Query: 149 SKGNFIWQS 157
             G+ IW +
Sbjct: 99  --GSDIWST 105


>pdb|1BWU|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
           Sativum) Bulbs Complexed With Alpha-D-Mannose
          Length = 106

 Score = 33.9 bits (76), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTA-NKGVVGFKLLSNGNMVLHD 148
           VW +N G   ++     L +DGN V+ +A+G  +W +++    G     L  +GN+V++ 
Sbjct: 40  VWASNTGILGKKGCRAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYR 99

Query: 149 SKGNFIWQS 157
           S    IW +
Sbjct: 100 SD---IWST 105


>pdb|3A0C|A Chain A, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
           From Polygonatum Cyrtonema Hua
 pdb|3A0C|B Chain B, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
           From Polygonatum Cyrtonema Hua
 pdb|3A0C|C Chain C, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
           From Polygonatum Cyrtonema Hua
 pdb|3A0C|D Chain D, Crystal Structure Of An Anti-Hiv Mannose-Binding Lectin
           From Polygonatum Cyrtonema Hua
 pdb|3A0D|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
           Complexed With Monomannoside
 pdb|3A0E|A Chain A, Crystal Structure Of Polygonatum Cyrtonema Lectin (Pcl)
           Complexed With Dimannoside
          Length = 110

 Score = 31.6 bits (70), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 110 DGNLVLAEADGTVVWQTNTANKGV-VGFKLLSNGNMVLHDSKGNFIWQS 157
           D N VL ++ G  VW +NT   G      L +NGN+V++D     IWQ+
Sbjct: 29  DCNFVLYDS-GKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQT 76



 Score = 29.6 bits (65), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 90  VWEANRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK 131
           VW +N G  +      +L  +GNLV+ +    V+WQT T  K
Sbjct: 41  VWASNTGG-LGSGCRLTLHNNGNLVIYDQSNRVIWQTKTNGK 81


>pdb|1DLP|A Chain A, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
 pdb|1DLP|B Chain B, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
 pdb|1DLP|C Chain C, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
 pdb|1DLP|D Chain D, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
 pdb|1DLP|E Chain E, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
 pdb|1DLP|F Chain F, Structural Characterization Of The Native Fetuin-Binding
           Protein Scilla Campanulata Agglutinin (Scafet): A Novel
           Two-Domain Lectin
          Length = 236

 Score = 30.4 bits (67), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 46/103 (44%), Gaps = 30/103 (29%)

Query: 105 FSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLS-NGNMVLHDSKGNFIWQSFDYPTD 163
            S+ TD NLVL + D  V W TNTA KG     +L  NG M +  ++   +W S +    
Sbjct: 154 LSMETDCNLVLFDRDDRV-WSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVWTSGN---- 208

Query: 164 TLLVGQSLRAGGVAKLVSRASEKENIDGPYSFLMEPKR-LAMY 205
                            SR++      G Y F+++P R LA+Y
Sbjct: 209 -----------------SRSA------GRYVFVLQPDRNLAIY 228



 Score = 29.6 bits (65), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 15/72 (20%)

Query: 108 GTDGNLVLA-EADGTV------VWQTNTANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDY 160
           G+ GN VL  + D TV      +W + T+NKG V   + +NGN +L+ ++GN      D 
Sbjct: 85  GSIGNYVLVLQPDRTVTIYGPGLWDSGTSNKGSV--VVANNGNSILYSTQGN------DN 136

Query: 161 PTDTLLVGQSLR 172
              TL   QSL+
Sbjct: 137 HPQTLHATQSLQ 148



 Score = 29.3 bits (64), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 48/188 (25%)

Query: 105 FSLGTDGNLVLAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNFIWQSFDYPTDT 164
           F++ +D NLVL ++D   VW +NTA        L S+G +V+  ++    W S       
Sbjct: 30  FTMQSDCNLVLFDSD-VRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSS------- 81

Query: 165 LLVGQSLRAGGVAKLVSRASEKENIDGPYSFLMEPKRLAMYYKSSNSPRPVLY--FTSSE 222
                                K +I G Y  +++P R    Y       P L+   TS++
Sbjct: 82  -------------------GTKGSI-GNYVLVLQPDRTVTIYG------PGLWDSGTSNK 115

Query: 223 WFTVREGSLENITFTSEPETEEAFAYHLSLDSSVAGVRLARPRYNSTISLLRLEMDGNLR 282
              V   +  +I ++++         H +    ++  RL+            +E D NL 
Sbjct: 116 GSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLS------------METDCNLV 163

Query: 283 IYTYDERV 290
           ++  D+RV
Sbjct: 164 LFDRDDRV 171


>pdb|1XD6|A Chain A, Crystal Structures Of Novel Monomeric Monocot Mannose-
           Binding Lectins From Gastrodia Elata
          Length = 112

 Score = 30.4 bits (67), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)

Query: 88  RWVWEA-NRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK-GVVGFKLLSNGNMV 145
           R VW +   GK    N    +  DGNLV+       +W +NT  + G     L  + N+V
Sbjct: 38  RAVWASGTNGKA--SNCILKMQRDGNLVIYSGS-RAMWASNTNRQDGNYYLILQRDRNVV 94

Query: 146 LHDSKGNFIWQS 157
           ++D+  N IW S
Sbjct: 95  IYDNSNNAIWAS 106


>pdb|1NPL|A Chain A, Mannose-Specific Agglutinin (Lectin) From Daffodil
           (Narcissus Pseudonarcissus) Bulbs In Complex With
           Mannose-Alpha1,3-Mannose
 pdb|3DZW|A Chain A, Structure Of Narcissus Pseudonarcissus Lectin Complex With
           Mannobiose At 1.7 A Resolution, Form Ii
 pdb|3DZW|B Chain B, Structure Of Narcissus Pseudonarcissus Lectin Complex With
           Mannobiose At 1.7 A Resolution, Form Ii
          Length = 109

 Score = 30.0 bits (66), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 104 TFSLGTDGNLVLAEADGTVVWQTNTAN-KGVVGFKLLSNGNMVLHDSKGNFIWQS 157
            F +  D NLVL + D   +W TNT          + S+GN+V++  + N IW S
Sbjct: 22  VFIMQEDCNLVLYDVD-KPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWAS 75


>pdb|1XD5|A Chain A, Crystal Structures Of Novel Monomeric Monocot Mannose-
           Binding Lectins From Gastrodia Elata
 pdb|1XD5|B Chain B, Crystal Structures Of Novel Monomeric Monocot Mannose-
           Binding Lectins From Gastrodia Elata
 pdb|1XD5|C Chain C, Crystal Structures Of Novel Monomeric Monocot Mannose-
           Binding Lectins From Gastrodia Elata
 pdb|1XD5|D Chain D, Crystal Structures Of Novel Monomeric Monocot Mannose-
           Binding Lectins From Gastrodia Elata
          Length = 112

 Score = 28.5 bits (62), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 88  RWVWEA-NRGKPVRENATFSLGTDGNLVLAEADGTVVWQTNTANK-GVVGFKLLSNGNMV 145
           R VW +   GK         +  DGNLV+       +W +NT  + G     L  + N+V
Sbjct: 38  RAVWASGTNGKA--SGCVLKMQNDGNLVIYSGS-RAIWASNTNRQNGNYYLILQRDRNVV 94

Query: 146 LHDSKGNFIWQS 157
           ++D+  N IW +
Sbjct: 95  IYDNSNNAIWAT 106


>pdb|3R0E|A Chain A, Structure Of Remusatia Vivipara Lectin
 pdb|3R0E|C Chain C, Structure Of Remusatia Vivipara Lectin
          Length = 109

 Score = 28.5 bits (62), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%)

Query: 101 ENATFSL--GTDGNLVLAEADGTVVWQTNTANKGV-VGFKLLSNGNMVLHDSKGNFIWQS 157
           +N  F L    D NLVL   +    WQ+NTAN G      L   G +V+ +  G+ +W+S
Sbjct: 19  KNGDFDLVMQDDCNLVLYNGN----WQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKS 74


>pdb|3Q54|A Chain A, Crystal Structure Of Escherichia Coli Bamb
          Length = 368

 Score = 28.1 bits (61), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 115 LAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNF 153
           L  +DGTV WQT  A +  +   ++S+G +++H S G  
Sbjct: 110 LNTSDGTVAWQTKVAGE-ALSRPVVSDGLVLIHTSNGQL 147


>pdb|1B77|A Chain A, Building A Replisome Structure From Interacting Pieces: A
           Sliding Clamp Complexed With An Interaction Peptide From
           Dna Polymerase
 pdb|1B77|B Chain B, Building A Replisome Structure From Interacting Pieces: A
           Sliding Clamp Complexed With An Interaction Peptide From
           Dna Polymerase
 pdb|1B77|C Chain C, Building A Replisome Structure From Interacting Pieces: A
           Sliding Clamp Complexed With An Interaction Peptide From
           Dna Polymerase
 pdb|1B8H|A Chain A, Sliding Clamp, Dna Polymerase
 pdb|1B8H|B Chain B, Sliding Clamp, Dna Polymerase
 pdb|1B8H|C Chain C, Sliding Clamp, Dna Polymerase
          Length = 228

 Score = 28.1 bits (61), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 99  VRENATFSLGTDGNLVLAEADGTVVWQTNTANKGVVGF 136
           V ++A  S+ TDGN+ +A+   TV W    A+K  + F
Sbjct: 67  VSDDAEISMHTDGNIKIADTRSTVYWP--AADKSTIVF 102


>pdb|3PRW|A Chain A, Crystal Structure Of The Lipoprotein Bamb
          Length = 377

 Score = 28.1 bits (61), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 115 LAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNF 153
           L  +DGTV WQT  A +  +   ++S+G +++H S G  
Sbjct: 119 LNTSDGTVAWQTKVAGE-ALSRPVVSDGLVLIHTSNGQL 156


>pdb|3P1L|A Chain A, Crystal Structure Of Escherichia Coli Bamb, A Lipoprotein
           Component Of The Beta-Barrel Assembly Machinery Complex,
           Native Crystals
          Length = 393

 Score = 28.1 bits (61), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 115 LAEADGTVVWQTNTANKGVVGFKLLSNGNMVLHDSKGNF 153
           L  +DGTV WQT  A +  +   ++S+G +++H S G  
Sbjct: 135 LNTSDGTVAWQTKVAGE-ALSRPVVSDGLVLIHTSNGQL 172


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.320    0.136    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,711,853
Number of Sequences: 62578
Number of extensions: 604991
Number of successful extensions: 1362
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1321
Number of HSP's gapped (non-prelim): 61
length of query: 433
length of database: 14,973,337
effective HSP length: 102
effective length of query: 331
effective length of database: 8,590,381
effective search space: 2843416111
effective search space used: 2843416111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)